Citrus Sinensis ID: 013985

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430--
MKLSALQQSYLSRRSNSFRASAPLDSSSDSAIKSPAAIFWLVLHGLCCLISLVLGFRFSRLVFFFIFSTSTTSTTNLYTAPFRNLASDITTPFVSSSTPVEIPVLNRTTPNSNSRVVVGRHGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEARSDSKFPPG
cccHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcEEEEEEEEEEEEEcccccccccHHHHHHccccccccccccccEEcccccEEEEEcccccccccccccccccccccccccEEEEEEEEEHHHHcccccccccccccccccccccccHHHHHccccccccccccccccEEEEEEcccccccccccccc
ccHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccccccEccccccccccccccccccccccccccccEEEccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHccccEEEEEccccccccccccccccHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHccEEcEEEEEEEEccccccccHHEEEcHHcccccccEEEEccEEccccEEEEEEEcccccccccEEEEcccccccccccccEEEEEEEHHHHccccccccccccccccccccccHHHHHHHcccHHHcccccccccEEEEEEEccccccccccccc
MKLSALQQSYLSrrsnsfrasapldsssdsaiksPAAIFWLVLHGLCCLISLVLGFRFSRLVFFFIFStsttsttnlytapfrnlasdittpfvssstpveipvlnrttpnsnsrvvvgrhgirirpwphpnptevMKAHKIIERVQREQRahfgfknprtlivvtptyVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIhvgvdqkmpaswggrhQLEAKMRLRALRIVREEKLDGIvmfaddsnmhsMELFDEIQNVKWFGAVSVGILALagnqdesssvimekeeggentampvqgpacnssnnlvgwhtfnslpyarksatyiddratvlprklEWAGFVLNSRLLWkeakdkpewvndldlldglediesplsllkdqsmveplgncgrQVIVWWLRVearsdskfppg
MKLSALQQSYLSRRSNSFRASAPLDSSSDSAIKSPAAIFWLVLHGLCCLISLVLGFRFSRLVFFFIFSTsttsttnlytAPFRNLASDITTPFVSSSTPveipvlnrttpnsnsrvvvgrhgirirpwphpnpteVMKAHKIIERVQREQrahfgfknprtlivvTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGvdqkmpaswggrhqLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEarsdskfppg
MKLSALQQSYLSRRSNSFRasapldsssdsaIKSPAAIFWLVLHGLCCLISLvlgfrfsrlvfffifststtsttNLYTAPFRNLASDITTPFVSSSTPVEIPVLNRTTPNSNSrvvvgrhgirirPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNdldlldgledIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEARSDSKFPPG
***********************************AAIFWLVLHGLCCLISLVLGFRFSRLVFFFIF*****************L**DITTPF********IPVL*********RVVVGRHGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAG*******************************NNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVE**********
*********Y****************************FWLVLHGLCCLISLVLGFRFSRLVFFFIFSTSTTSTTNLY**********************************************************************************TLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDES**************AMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEA*********
********SYLSR*****************AIKSPAAIFWLVLHGLCCLISLVLGFRFSRLVFFFIFSTSTTSTTNLYTAPFRNLASDITTPFVSSSTPVEIPVLNRTTPNSNSRVVVGRHGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEAR********
********************************KSPAAIFWLVLHGLCCLISLVLGFRFSRLVFFFIFSTSTTSTTNLYTAPFRNLASDITTPFVSSSTPVEI***********SRVVVGRHGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEA*S*******
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MKLSALQQSYLSRRSNSFRASAPLDSSSDSAIKSPAAIFWLVLHGLCCLISLVLGFRFSRLVFFFIFSTSTTSTTNLYTAPFRNLASDITTPFVSSSTPVEIPVLNRTTPNSNSRVVVGRHGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEARSDSKFPPG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query432 2.2.26 [Sep-21-2011]
Q9FH90492 Probable beta-1,4-xylosyl yes no 0.981 0.861 0.678 1e-173
Q8L707525 Probable beta-1,4-xylosyl no no 0.986 0.811 0.697 1e-172
Q653F4524 Probable glucuronosyltran yes no 0.907 0.748 0.557 1e-123
B9FCV3446 Probable glucuronosyltran no no 0.849 0.822 0.352 7e-62
Q9SXC4394 Probable beta-1,4-xylosyl no no 0.550 0.604 0.296 2e-22
Q7XTB2381 Probable glucuronosyltran no no 0.569 0.645 0.278 2e-17
Q8S626351 Probable glucuronosyltran no no 0.534 0.658 0.265 2e-17
Q5QM25446 Probable glucuronosyltran no no 0.525 0.508 0.254 6e-16
Q9ZQC6351 Probable beta-1,4-xylosyl no no 0.736 0.905 0.237 4e-12
Q6AT32451 Probable glucuronosyltran no no 0.523 0.501 0.243 5e-12
>sp|Q9FH90|IX14H_ARATH Probable beta-1,4-xylosyltransferase IRX14H OS=Arabidopsis thaliana GN=IRX14H PE=2 SV=1 Back     alignment and function desciption
 Score =  607 bits (1565), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/435 (67%), Positives = 353/435 (81%), Gaps = 11/435 (2%)

Query: 1   MKLSALQQSYLSRRSNSFRASAPLDSSSDSAIKSPAAIFWLVLHGLCCLISLVLGFRFSR 60
           MKLS  + SY +RR +SFR+S  LD S D   KSP+++FW V+HGLCCLISL+LGFRFS 
Sbjct: 1   MKLSVFRLSYWNRRGSSFRSSPSLDPSFDG--KSPSSVFWFVIHGLCCLISLILGFRFSH 58

Query: 61  LVFFFIFSTSTTSTTNLYTAPFRNLASDITTPFVSSSTPVEIPVLNRTTPNSNSRVVVGR 120
           LV FF+FSTS T   NLYT PF   A +     +    P+E      +T   NSRVVVGR
Sbjct: 59  LVLFFLFSTSVT---NLYTTPFL-FAGNGGVSQLLRLKPLE--TATNSTVKKNSRVVVGR 112

Query: 121 HGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTG 180
           HGIRIRPWPHPNP EV++AH+++ RVQ+EQ++ +G ++PRT+IVVTPTYVRTFQ LHLTG
Sbjct: 113 HGIRIRPWPHPNPIEVLRAHQLLVRVQKEQKSMYGVRSPRTVIVVTPTYVRTFQALHLTG 172

Query: 181 VMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKM 240
           VMHSLMLVPYDLVWIVVEAGG+TNETAS IAKS L+TIH+G DQKMP +W  RH+LE KM
Sbjct: 173 VMHSLMLVPYDLVWIVVEAGGITNETASFIAKSGLKTIHLGFDQKMPNTWEDRHKLETKM 232

Query: 241 RLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSV 300
           RL ALR+VRE+KLDGIVMFADDSNMHSMELFDEIQ VKWFGA+SVGILA +GN DE SS+
Sbjct: 233 RLHALRVVREKKLDGIVMFADDSNMHSMELFDEIQTVKWFGALSVGILAHSGNADELSSI 292

Query: 301 IM-EKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWA 359
           +  E+ +  E  +MP+QGP+CNSS  LVGWH FN+ PYA+K+A YID++A V+P K+EW+
Sbjct: 293 LKNEQGKNKEKPSMPIQGPSCNSSEKLVGWHIFNTQPYAKKTAVYIDEKAPVMPSKMEWS 352

Query: 360 GFVLNSRLLWKEA-KDKPEWVNDLDLL-DGLEDIESPLSLLKDQSMVEPLGNCGRQVIVW 417
           GFVLNSRLLWKE+  DKP WV DL LL DG  +IESPLSL+KD SMVEPLG+CGR+V++W
Sbjct: 353 GFVLNSRLLWKESLDDKPAWVKDLSLLDDGYAEIESPLSLVKDPSMVEPLGSCGRRVLLW 412

Query: 418 WLRVEARSDSKFPPG 432
           WLRVEAR+DSKFPPG
Sbjct: 413 WLRVEARADSKFPPG 427
Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: -
>sp|Q8L707|IRX14_ARATH Probable beta-1,4-xylosyltransferase IRX14 OS=Arabidopsis thaliana GN=IRX14 PE=2 SV=1 Back     alignment and function description
>sp|Q653F4|GT61_ORYSJ Probable glucuronosyltransferase Os06g0687900 OS=Oryza sativa subsp. japonica GN=Os06g0687900 PE=2 SV=1 Back     alignment and function description
>sp|B9FCV3|GT43_ORYSJ Probable glucuronosyltransferase Os04g0650300 OS=Oryza sativa subsp. japonica GN=Os04g0650300 PE=2 SV=1 Back     alignment and function description
>sp|Q9SXC4|IRX9H_ARATH Probable beta-1,4-xylosyltransferase IRX9H OS=Arabidopsis thaliana GN=IRX9H PE=1 SV=2 Back     alignment and function description
>sp|Q7XTB2|GT41_ORYSJ Probable glucuronosyltransferase Os04g0103100 OS=Oryza sativa subsp. japonica GN=Os04g0103100 PE=2 SV=2 Back     alignment and function description
>sp|Q8S626|GT102_ORYSJ Probable glucuronosyltransferase Os10g0205300 OS=Oryza sativa subsp. japonica GN=Os10g0205300 PE=2 SV=1 Back     alignment and function description
>sp|Q5QM25|GT12_ORYSJ Probable glucuronosyltransferase Os01g0675500 OS=Oryza sativa subsp. japonica GN=Os01g0675500 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZQC6|IRX9_ARATH Probable beta-1,4-xylosyltransferase IRX9 OS=Arabidopsis thaliana GN=IRX9 PE=2 SV=1 Back     alignment and function description
>sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query432
66347025507 glycosyltransferase [Citrus trifoliata] 0.993 0.846 0.972 0.0
225438805513 PREDICTED: probable beta-1,4-xylosyltran 0.990 0.834 0.752 0.0
224096716510 glycosyl transferase, CAZy family GT43 [ 0.981 0.831 0.746 0.0
356496929493 PREDICTED: probable beta-1,4-xylosyltran 0.951 0.833 0.737 0.0
224081752503 predicted protein [Populus trichocarpa] 0.983 0.844 0.772 0.0
63087742477 glycosyltransferase [Gossypium raimondii 0.967 0.876 0.720 0.0
351725053491 glycosyltransferase [Glycine max] gi|663 0.951 0.837 0.740 1e-180
449448300506 PREDICTED: probable beta-1,4-xylosyltran 0.972 0.830 0.720 1e-180
296082369475 unnamed protein product [Vitis vinifera] 0.914 0.831 0.736 1e-179
343466187494 glycosyltransferase [Siraitia grosvenori 0.939 0.821 0.720 1e-174
>gi|66347025|emb|CAI94901.1| glycosyltransferase [Citrus trifoliata] Back     alignment and taxonomy information
 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/432 (97%), Positives = 423/432 (97%), Gaps = 3/432 (0%)

Query: 1   MKLSALQQSYLSRRSNSFRASAPLDSSSDSAIKSPAAIFWLVLHGLCCLISLVLGFRFSR 60
           MKLSALQQSYLSRRSNSFR SAPLDSSSDSAIKSPAAIFWLVLHGLCCLISLVLGFRFSR
Sbjct: 1   MKLSALQQSYLSRRSNSFRGSAPLDSSSDSAIKSPAAIFWLVLHGLCCLISLVLGFRFSR 60

Query: 61  LVFFFIFSTSTTSTTNLYTAPFRNLASDITTPFVSSSTPVEIPVLNRTTPNSNSRVVVGR 120
           LVFFFIFSTSTTSTTNLYTAPFRNLASDITTPFVSSSTPVEIPVLNRTTPNSNSRVVVGR
Sbjct: 61  LVFFFIFSTSTTSTTNLYTAPFRNLASDITTPFVSSSTPVEIPVLNRTTPNSNSRVVVGR 120

Query: 121 HGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTG 180
           HGIRIRPWPHPNPTEVMKAHKIIERVQREQRAH G KNPRTLIVVTPTYVRTFQTLHLTG
Sbjct: 121 HGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHVGVKNPRTLIVVTPTYVRTFQTLHLTG 180

Query: 181 VMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKM 240
           VMHSLMLVPYDLVWIVVEA GVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKM
Sbjct: 181 VMHSLMLVPYDLVWIVVEARGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKM 240

Query: 241 RLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSV 300
           RLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSV
Sbjct: 241 RLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSV 300

Query: 301 IMEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAG 360
           IM  EEGGENTAMPVQGPACNSSNN+ GWHTFN+ PYAR SATYIDDRATVLPRKLEWAG
Sbjct: 301 IM--EEGGENTAMPVQGPACNSSNNVAGWHTFNT-PYARTSATYIDDRATVLPRKLEWAG 357

Query: 361 FVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVIVWWLR 420
           FVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQV+VWWLR
Sbjct: 358 FVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIESPLSLLKDQSMVEPLGNCGRQVLVWWLR 417

Query: 421 VEARSDSKFPPG 432
           VEARSDSKFPPG
Sbjct: 418 VEARSDSKFPPG 429

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225438805|ref|XP_002283249.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX14H-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224096716|ref|XP_002310709.1| glycosyl transferase, CAZy family GT43 [Populus trichocarpa] gi|222853612|gb|EEE91159.1| glycosyl transferase, CAZy family GT43 [Populus trichocarpa] gi|333951815|gb|AEG25425.1| glycosyltransferase GT43C [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356496929|ref|XP_003517317.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX14H-like [Glycine max] Back     alignment and taxonomy information
>gi|224081752|ref|XP_002306485.1| predicted protein [Populus trichocarpa] gi|222855934|gb|EEE93481.1| predicted protein [Populus trichocarpa] gi|333951817|gb|AEG25426.1| glycosyltransferase GT43D [Populus trichocarpa] Back     alignment and taxonomy information
>gi|63087742|emb|CAI93186.1| glycosyltransferase [Gossypium raimondii] Back     alignment and taxonomy information
>gi|351725053|ref|NP_001236823.1| glycosyltransferase [Glycine max] gi|66347023|emb|CAI94900.1| glycosyltransferase [Glycine max] Back     alignment and taxonomy information
>gi|449448300|ref|XP_004141904.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX14H-like [Cucumis sativus] gi|449529046|ref|XP_004171512.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX14H-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296082369|emb|CBI21374.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|343466187|gb|AEM42987.1| glycosyltransferase [Siraitia grosvenorii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query432
TAIR|locus:2115090525 IRX14 "irregular xylem 14" [Ar 0.986 0.811 0.611 4.1e-136
TAIR|locus:2155533492 IRX14-L "IRREGULAR XYLEM 14-LI 0.981 0.861 0.588 1.1e-133
TAIR|locus:2196899394 IRX9-L "AT1G27600" [Arabidopsi 0.310 0.340 0.378 4.1e-18
TAIR|locus:2061748351 IRX9 "IRREGULAR XYLEM 9" [Arab 0.451 0.555 0.260 5.9e-10
UNIPROTKB|Q9P2W7334 B3GAT1 "Galactosylgalactosylxy 0.296 0.383 0.356 2e-09
UNIPROTKB|Q5CB03335 B3GAT1 "Galactosylgalactosylxy 0.296 0.382 0.356 2e-09
UNIPROTKB|F5H0S0347 B3GAT1 "Galactosylgalactosylxy 0.296 0.368 0.356 2.4e-09
UNIPROTKB|F1S6C4347 B3GAT1 "Uncharacterized protei 0.296 0.368 0.356 2.4e-09
RGD|70880334 B3gat1 "beta-1,3-glucuronyltra 0.296 0.383 0.356 2.6e-09
WB|WBGene00008293304 glct-5 [Caenorhabditis elegans 0.326 0.463 0.341 4.4e-09
TAIR|locus:2115090 IRX14 "irregular xylem 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
 Identities = 271/443 (61%), Positives = 312/443 (70%)

Query:     1 MKLSALQQSYLSRRSNSFRXXXXXXXXXXXXIKSPAAIFWLVLHGLCCLISLXXXXXXXX 60
             MKLSAL QSYL+RRSNSFR             KS  A+FWL+LH LCCLISL        
Sbjct:     1 MKLSALHQSYLNRRSNSFRSPTSLDSSVDGSGKSLIAVFWLILHCLCCLISLVLGFRFSR 60

Query:    61 XXXXXXXXXXXXXXXNLYTAPFRNLASDITTPFVSSSTPVEI--PVLNRTT----PNSNS 114
                            NLY+ PFR    D+    +   T      P  N TT       +S
Sbjct:    61 LVFFFLFSTSST---NLYSLPFR---PDLPVKHLDVHTIGRTLDPGANGTTVVATATKSS 114

Query:   115 XXXXXXXXXXXXPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQ 174
                         PWPHPNP EVMKAH+II RVQ+EQ+  FG K+ + +I VTPTYVRTFQ
Sbjct:   115 RVVVGRHGIRIRPWPHPNPVEVMKAHQIIGRVQKEQKMIFGMKSSKMVIAVTPTYVRTFQ 174

Query:   175 TLHLTGVMHSLMLVPYDLVWIVVEAGGVTNETASLIAKSKLRTIHVGVDQKMPASWGGRH 234
              LHLTGVMHSLMLVPYDLVWIVVEAGG TNET  +IAKS LRTIHVG+DQ+MP +W  R 
Sbjct:   175 ALHLTGVMHSLMLVPYDLVWIVVEAGGATNETGLIIAKSGLRTIHVGIDQRMPNTWEDRS 234

Query:   235 QLEAKMRLRALRIVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQ 294
             +LE  MRL+ALR+VREEKLDGIVMFADDSNMHSMELFDEIQNVKWFG VSVGILA +GN 
Sbjct:   235 KLEVFMRLQALRVVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGTVSVGILAHSGNA 294

Query:   295 DESSSVI-----MEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRA 349
             +E    +     MEKEE  E++++PVQGPACNS++ L+GWH FN+LPYA KSA YIDD A
Sbjct:   295 EEMVLSMEKRKEMEKEEEEESSSLPVQGPACNSTDQLIGWHIFNTLPYAGKSAVYIDDVA 354

Query:   350 TVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNXXXXXXXXXXIESPLSLLKDQSMVEPLGN 409
              VLP+KLEW+GFVLNSRLLW+EA++KPEWV           +ESPLSLLKD SMVEPLG+
Sbjct:   355 AVLPQKLEWSGFVLNSRLLWEEAENKPEWVKDFGSLNENEGVESPLSLLKDPSMVEPLGS 414

Query:   410 CGRQVIVWWLRVEARSDSKFPPG 432
             CGRQV++WWLRVEAR+DSKFPPG
Sbjct:   415 CGRQVLLWWLRVEARADSKFPPG 437
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0010051 "xylem and phloem pattern formation" evidence=IMP
GO:0010154 "fruit development" evidence=IMP
GO:0010417 "glucuronoxylan biosynthetic process" evidence=IMP
GO:0042285 "xylosyltransferase activity" evidence=IMP
GO:0048367 "shoot system development" evidence=IMP
GO:0007155 "cell adhesion" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2155533 IRX14-L "IRREGULAR XYLEM 14-LIKE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196899 IRX9-L "AT1G27600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061748 IRX9 "IRREGULAR XYLEM 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9P2W7 B3GAT1 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5CB03 B3GAT1 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F5H0S0 B3GAT1 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S6C4 B3GAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|70880 B3gat1 "beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
WB|WBGene00008293 glct-5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q653F4GT61_ORYSJ2, ., 4, ., -, ., -0.55710.90740.7480yesno
Q9FH90IX14H_ARATH2, ., 4, ., 2, ., -0.67810.98140.8617yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
3rd Layer2.4.1.135LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00019550001
SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (510 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query432
cd00218223 cd00218, GlcAT-I, Beta1,3-glucuronyltransferase I 2e-67
pfam03360206 pfam03360, Glyco_transf_43, Glycosyltransferase fa 2e-53
PLN02458346 PLN02458, PLN02458, transferase, transferring glyc 3e-16
>gnl|CDD|132995 cd00218, GlcAT-I, Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis Back     alignment and domain information 
 Score =  214 bits (546), Expect = 2e-67
 Identities = 89/271 (32%), Positives = 123/271 (45%), Gaps = 55/271 (20%)

Query: 160 RTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVE-AGGVTNETASLIAKSKLRTI 218
            T+ VVTPTY R  Q   LT + H+L LVP  L WIVVE +   T   A L+ +S L   
Sbjct: 1   PTIYVVTPTYARPVQKAELTRLAHTLRLVP-PLHWIVVEDSEEKTPLVAELLRRSGLMYT 59

Query: 219 HVGVDQKMPASWG---GRHQLEAKMRLRALRIVREE---KLDGIVMFADDSNMHSMELFD 272
           H+        +W    G  Q     R  ALR +RE    KLDG+V FADD N + +ELF+
Sbjct: 60  HLNAKTPSDPTWLKPRGVEQ-----RNLALRWIREHLSAKLDGVVYFADDDNTYDLELFE 114

Query: 273 EIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGWHTF 332
           E++ +K  G   VG++                        + V+GP C +   +VGWHT 
Sbjct: 115 EMRKIKRVGVWPVGLVG----------------------GLRVEGPVCENG-KVVGWHTA 151

Query: 333 NSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIE 392
                      +  +R    P  ++ AGF  NS+LLW    D P  V       G ++  
Sbjct: 152 -----------WKPER----PFPIDMAGFAFNSKLLW----DPPRAVFPYSAKRGYQESS 192

Query: 393 SPLSLLKDQSMVEPLGNCGRQVIVWWLRVEA 423
               L+ D+  +EPL N   +V+VW  R E 
Sbjct: 193 FLEQLVLDRKELEPLANNCSKVLVWHTRTEK 223

Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). Length = 223
>gnl|CDD|217513 pfam03360, Glyco_transf_43, Glycosyltransferase family 43 Back     alignment and domain information
>gnl|CDD|215252 PLN02458, PLN02458, transferase, transferring glycosyl groups Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 432
KOG1476330 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQ 100.0
cd00218223 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) 100.0
PLN02458346 transferase, transferring glycosyl groups 100.0
PF03360207 Glyco_transf_43: Glycosyltransferase family 43; In 100.0
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 97.73
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 96.65
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 95.91
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 95.84
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 95.81
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 95.8
PRK10018279 putative glycosyl transferase; Provisional 95.69
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 95.26
cd06423180 CESA_like CESA_like is the cellulose synthase supe 95.26
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 95.19
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 95.13
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 95.04
PRK10063248 putative glycosyl transferase; Provisional 94.9
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 94.72
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 94.71
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 94.6
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 94.53
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 94.3
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 93.92
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 93.85
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 93.81
cd06442224 DPM1_like DPM1_like represents putative enzymes si 93.79
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 93.55
PRK10073328 putative glycosyl transferase; Provisional 93.54
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 93.49
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 93.45
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 93.42
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 93.42
cd06438183 EpsO_like EpsO protein participates in the methano 92.82
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 92.78
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 91.36
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 90.77
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 90.63
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 90.59
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 90.55
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 90.42
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 90.0
cd04188211 DPG_synthase DPG_synthase is involved in protein N 89.95
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 89.86
PRK11204 420 N-glycosyltransferase; Provisional 88.81
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 86.41
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 84.93
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 83.6
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 82.72
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-91  Score=690.04  Aligned_cols=266  Identities=39%  Similarity=0.598  Sum_probs=236.2

Q ss_pred             CCCCceeecccccccCCCCCCChHHhhHHHHHHHHHHHHHHhcCCCCCCcEEEEEccCCccchhhHHHHhhhhhccCCCC
Q 013985          111 NSNSRVVVGRHGIRIRPWPHPNPTEVMKAHKIIERVQREQRAHFGFKNPRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPY  190 (432)
Q Consensus       111 ~~~s~v~vgrh~i~~rpwphp~p~e~~~ah~i~~rvQ~eq~~~~g~~~~~~IivVTPTy~R~~Q~a~LTRLa~TL~lVp~  190 (432)
                      ..++++.+|||||++|+|+|+++.++++++.+..+.|.|++.+     .|+||||||||.|++|++|||||||||+||| 
T Consensus        43 ~~~~~~~~~~~gir~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----~~~iivVTPTY~R~~q~~~LtRlanTL~~V~-  116 (330)
T KOG1476|consen   43 TYSSPRVVGRHGIRIRPWATAPAIAVEKVAETRSRTQKEPEMQ-----LPTIIVVTPTYVRPVQAAELTRLANTLRLVP-  116 (330)
T ss_pred             cccceeeeccccccccccCCCchhhhhhhccccccCCcccccC-----CccEEEEcccccchhHHHHHHHHHHHHhhcC-
Confidence            6688999999999999999999999999999999999998764     9999999999999999999999999999999 


Q ss_pred             CeEEEEEeCCC-CCHHHHHHHhhCCCceeeeecCCCCCCCcCCCchhhHHHHHHHHHHHH-----hccCCeEEEEecCCC
Q 013985          191 DLVWIVVEAGG-VTNETASLIAKSKLRTIHVGVDQKMPASWGGRHQLEAKMRLRALRIVR-----EEKLDGIVMFADDSN  264 (432)
Q Consensus       191 ~L~WIVVEd~~-~t~~va~lL~~sgl~y~HL~~~~~~p~~~~~r~~~~~~qRN~AL~~IR-----~~~~~GVVyFADDDN  264 (432)
                      |||||||||++ .+++|+.+|++|||+|+||+++++++  ++.+++.  +|||.||+|||     +|+++||||||||||
T Consensus       117 nLhWIVVEd~~~~~p~v~~~L~rtgl~ythl~~~t~~~--~~~~rg~--~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN  192 (330)
T KOG1476|consen  117 NLHWIVVEDGEGTTPEVSGILRRTGLPYTHLVHKTPMG--YKARRGW--EQRNMALRWIRSRILRHHKLEGVVYFADDDN  192 (330)
T ss_pred             CeeEEEEecCCCCCHHHHHHHHHcCCceEEEeccCCCC--Cccccch--hHHHHHHHHHHHhcccccccceEEEEccCCc
Confidence            99999999995 79999999999999999999997765  3444333  69999999999     679999999999999


Q ss_pred             ccchhhhhhhcceeeeeEEEeeEEeecCCCccchhhhhhhhcCCCCCccccccceecCCCCeEEEEecCCCccccccccc
Q 013985          265 MHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATY  344 (432)
Q Consensus       265 tYdl~LFdemR~tk~vgvWPVGlv~~~Gg~~~~~~~~~~~~~~~~~~~v~vEGP~cn~sgkVvGWht~~~~p~~~~sa~~  344 (432)
                      +||+|||+|||+||+||+||||++   ||                   +.||||+|+ +|||+|||+.|.          
T Consensus       193 ~YdleLF~eiR~v~~~gvWpVg~v---gg-------------------~~vE~P~v~-~~kvvg~~~~w~----------  239 (330)
T KOG1476|consen  193 TYDLELFEEIRNVKKFGVWPVGLV---GG-------------------ARVEGPVVN-NGKVVGWHTRWE----------  239 (330)
T ss_pred             chhHHHHHHHhccceeeeEeeeec---CC-------------------eeeecceec-cCeeEEEEeccc----------
Confidence            999999999999999999999998   65                   479999999 789999999873          


Q ss_pred             cccccccCCcccccceeeeeeccccccccCCCcccccccccCCCccccc--cccccCCCCcccccCCCCCEEEEEecccC
Q 013985          345 IDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLEDIES--PLSLLKDQSMVEPLGNCGRQVIVWWLRVE  422 (432)
Q Consensus       345 ~~drap~rpf~IDMAGFA~Ns~LLw~~~~~kp~~~~d~~~~~~~~~iEs--~L~lL~d~~~lEPla~cc~~VLVWHtRtE  422 (432)
                           |.|||+|||||||||+++||+++.+   |.++....++ ++.|+  +.+|..|.++|||+|+||++|||||||||
T Consensus       240 -----~~r~f~vdmaGFAvNl~lll~~~~a---~f~~~~~~~~-G~~E~~~l~~l~~d~~~iEp~~~~c~kILvWhtrte  310 (330)
T KOG1476|consen  240 -----PERPFAVDMAGFAVNLKLLLDPSNA---VFKPLCPRGE-GYQETCLLEQLGLDLSDIEPLAYECTKILVWHTRTE  310 (330)
T ss_pred             -----cCCCCccchhhheehhhhhccCccc---cccccCcCCC-CCcchhHHHHhcCCHHHccccccccceEEEEEeccc
Confidence                 8899999999999999999998643   4444332332 34443  45677999999999999999999999999


Q ss_pred             CCCCCC
Q 013985          423 ARSDSK  428 (432)
Q Consensus       423 ~~~~sk  428 (432)
                      ++.+.+
T Consensus       311 ~~~~~~  316 (330)
T KOG1476|consen  311 KPADKR  316 (330)
T ss_pred             Cccccc
Confidence            997533

>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis Back     alignment and domain information
>PLN02458 transferase, transferring glycosyl groups Back     alignment and domain information
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query432
1v82_A253 Crystal Structure Of Human Glcat-P Apo Form Length 6e-11
1fgg_A261 Crystal Structure Of 1,3-Glucuronyltransferase I (G 4e-08
3cu0_A281 Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In 5e-08
2d0j_A246 Crystal Structure Of Human Glcat-S Apo Form Length 9e-08
>pdb|1V82|A Chain A, Crystal Structure Of Human Glcat-P Apo Form Length = 253 Back     alignment and structure 
Iteration: 1

 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 49/224 (21%)
Query: 161 TLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVE-AGGVTNETASLIAKSKLRTIH 219
           T+ VVTPTY R  Q   LT + ++L+ VP +L W+VVE A   T  TA L+  + L   H
Sbjct: 4   TIHVVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVEDAPRRTPLTARLLRDTGLNYTH 62
Query: 220 VGVDQKMPASWGG--------RHQLEAKMRLRALR--IVREEKLDGIVMFADDSNMHSME 269
           + V+        G        R  ++  + LR LR    R     G+V FADD N +S+E
Sbjct: 63  LHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLE 122
Query: 270 LFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGW 329
           LF+E+++ +    VSV  +A  G                    +  + P  N +  +V W
Sbjct: 123 LFEEMRSTR---RVSVWPVAFVG-------------------GLRYEAPRVNGAGKVVRW 160
Query: 330 HTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAK 373
            T    P+               P  ++ AGF +N RL+ + ++
Sbjct: 161 KTVFD-PHR--------------PFAIDMAGFAVNLRLILQRSQ 189
>pdb|1FGG|A Chain A, Crystal Structure Of 1,3-Glucuronyltransferase I (Glcat-I) Complexed With Gal-Gal-Xyl, Udp, And Mn2+ Length = 261 Back     alignment and structure
>pdb|3CU0|A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser Length = 281 Back     alignment and structure
>pdb|2D0J|A Chain A, Crystal Structure Of Human Glcat-S Apo Form Length = 246 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query432
1v84_A253 Galactosylgalactosylxylosylprotein 3-beta- glucuro 2e-64
3cu0_A281 Galactosylgalactosylxylosylprotein 3-beta- glucuro 3e-61
2d0j_A246 Galactosylgalactosylxylosylprotein 3-beta- glucuro 1e-60
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-12
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* Length = 253 Back     alignment and structure
 Score =  206 bits (525), Expect = 2e-64
 Identities = 69/283 (24%), Positives = 108/283 (38%), Gaps = 53/283 (18%)

Query: 161 TLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVE-AGGVTNETASLIAKSKLRTIH 219
           T+ VVTPTY R  Q   LT + ++L+ VP +L W+VVE A   T  TA L+  + L   H
Sbjct: 4   TIHVVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVEDAPRRTPLTARLLRDTGLNYTH 62

Query: 220 VGVDQ--------KMPASWGGRHQLEAKMRLRALR--IVREEKLDGIVMFADDSNMHSME 269
           + V+                 R  ++  + LR LR    R     G+V FADD N +S+E
Sbjct: 63  LHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLE 122

Query: 270 LFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGW 329
           LF+E+++ +      V  +                        +  + P  N +  +V W
Sbjct: 123 LFEEMRSTRRVSVWPVAFVG----------------------GLRYEAPRVNGAGKVVRW 160

Query: 330 HTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLE 389
            T                     P  ++ AGF +N RL+      + +    L  + G  
Sbjct: 161 KTVFD---------------PHRPFAIDMAGFAVNLRLIL----QRSQAYFKLRGVKGGY 201

Query: 390 DIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEARSDSKFPPG 432
              S L  L   + +EP      +++VW  R E          
Sbjct: 202 QESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKK 244
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* Length = 281 Back     alignment and structure
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} Length = 246 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query432
1v84_A253 Galactosylgalactosylxylosylprotein 3-beta- glucuro 100.0
2d0j_A246 Galactosylgalactosylxylosylprotein 3-beta- glucuro 100.0
3cu0_A281 Galactosylgalactosylxylosylprotein 3-beta- glucuro 100.0
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 96.25
3bcv_A240 Putative glycosyltransferase protein; protein stru 95.48
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 94.85
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 94.59
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 93.58
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 92.87
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 92.71
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 92.37
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 90.79
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 90.66
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 90.4
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 88.56
2bo4_A 397 Mannosylglycerate synthase; catalysis, glycosyltra 81.1
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-85  Score=634.95  Aligned_cols=229  Identities=31%  Similarity=0.452  Sum_probs=197.8

Q ss_pred             CCcEEEEEccCCccchhhHHHHhhhhhccCCCCCeEEEEEeCCC-CCHHHHHHHhhCCCceeeeecCCCCCCCc------
Q 013985          158 NPRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGG-VTNETASLIAKSKLRTIHVGVDQKMPASW------  230 (432)
Q Consensus       158 ~~~~IivVTPTy~R~~Q~a~LTRLa~TL~lVp~~L~WIVVEd~~-~t~~va~lL~~sgl~y~HL~~~~~~p~~~------  230 (432)
                      ..|+||||||||+|++|+|||||||||||||| +||||||||++ +|++|+++|++|||+|+||++++  |.++      
T Consensus         1 ~~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~Vp-~L~WIVVEd~~~~t~~va~lL~~sgl~y~HL~~~~--p~~~~~~~~~   77 (253)
T 1v84_A            1 ALPTIHVVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVET--PRNYKLRGDA   77 (253)
T ss_dssp             -CCEEEEEEEECCSTTHHHHHHHHHHHHTTSS-SEEEEEEESSSSCCHHHHHHHHHHCCEEEEEECCC--CHHHHCC---
T ss_pred             CCCEEEEEeCCCCccchhHHHHHHhhhhccCC-ceEEEEEeCCCCCCHHHHHHHHHcCCceEEeecCC--Cccccccccc
Confidence            36999999999999999999999999999998 89999999987 69999999999999999999974  3222      


Q ss_pred             -CCCchhhHHHHHHHHHHHHhc-----cCCeEEEEecCCCccchhhhhhhcceeeeeEEEeeEEeecCCCccchhhhhhh
Q 013985          231 -GGRHQLEAKMRLRALRIVREE-----KLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEK  304 (432)
Q Consensus       231 -~~r~~~~~~qRN~AL~~IR~~-----~~~GVVyFADDDNtYdl~LFdemR~tk~vgvWPVGlv~~~Gg~~~~~~~~~~~  304 (432)
                       ..++..+.+|||+||+|||+|     +++||||||||||+||+|||||||+||+||+||||++   ||.          
T Consensus        78 ~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR~i~~vgvWPVglv---g~~----------  144 (253)
T 1v84_A           78 RDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFV---GGL----------  144 (253)
T ss_dssp             ----CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHHTCSSEEECCEESC---TTS----------
T ss_pred             cCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHhccCeeEEEEEEee---cCc----------
Confidence             222234567999999999984     6899999999999999999999999999999999999   553          


Q ss_pred             hcCCCCCccccccceecCCCCeEEEEecCCCccccccccccccccccCCcccccceeeeeeccccccccCCCcccccccc
Q 013985          305 EEGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDL  384 (432)
Q Consensus       305 ~~~~~~~~v~vEGP~cn~sgkVvGWht~~~~p~~~~sa~~~~drap~rpf~IDMAGFA~Ns~LLw~~~~~kp~~~~d~~~  384 (432)
                               .+|||+|+++|||+|||+.|.               |+|||||||||||||+++||+++++.    .+.+.
T Consensus       145 ---------~~EgPv~~~~gkVvGw~~~w~---------------~~R~fpiDmAGFA~N~~lll~~p~a~----~~~~~  196 (253)
T 1v84_A          145 ---------RYEAPRVNGAGKVVRWKTVFD---------------PHRPFAIDMAGFAVNLRLILQRSQAY----FKLRG  196 (253)
T ss_dssp             ---------SEEEEEECTTSCEEEEECSSC---------------TTSTTCCCGGGEEEEHHHHHHSTTCC----CCSSS
T ss_pred             ---------ceecCeECCCCCEeeeecccC---------------CCCCccceeeeeEEEehhhhhCCCce----ecccc
Confidence                     599999998899999999873               77999999999999999888755442    34455


Q ss_pred             cCCCccccc-cccccCCCCcccccCCCCCEEEEEecccCCCCCCCCCC
Q 013985          385 LDGLEDIES-PLSLLKDQSMVEPLGNCGRQVIVWWLRVEARSDSKFPP  431 (432)
Q Consensus       385 ~~~~~~iEs-~L~lL~d~~~lEPla~cc~~VLVWHtRtE~~~~sk~P~  431 (432)
                      +++ +++|| +|+.|.+.++|||+|+||++|||||||||+|...++|+
T Consensus       197 ~~~-g~~Es~fL~~l~~~~~lEp~~~~C~~VlvWHtrte~p~~~~e~~  243 (253)
T 1v84_A          197 VKG-GYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGK  243 (253)
T ss_dssp             SCT-TCHHHHHHHHHCCGGGEEECHHHHTSCCEECCCBCCCCCGGGTT
T ss_pred             CCC-cchhhHHHHhhhhHhhcEecCCCCCEEEEEecccCCcccccccc
Confidence            554 46777 77666788999999999999999999999999887775
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} Back     alignment and structure
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 432
d1v82a_252 c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, Gl 1e-79
d3cu0a1261 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (g 9e-71
>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  244 bits (625), Expect = 1e-79
 Identities = 69/283 (24%), Positives = 108/283 (38%), Gaps = 53/283 (18%)

Query: 161 TLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVE-AGGVTNETASLIAKSKLRTIH 219
           T+ VVTPTY R  Q   LT + ++L+ VP +L W+VVE A   T  TA L+  + L   H
Sbjct: 3   TIHVVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVEDAPRRTPLTARLLRDTGLNYTH 61

Query: 220 VGVDQK--------MPASWGGRHQLEAKMRLRALR--IVREEKLDGIVMFADDSNMHSME 269
           + V+                 R  ++  + LR LR    R     G+V FADD N +S+E
Sbjct: 62  LHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLE 121

Query: 270 LFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKEEGGENTAMPVQGPACNSSNNLVGW 329
           LF+E+++ +      V  +                        +  + P  N +  +V W
Sbjct: 122 LFEEMRSTRRVSVWPVAFVG----------------------GLRYEAPRVNGAGKVVRW 159

Query: 330 HTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLLDGLE 389
            T                     P  ++ AGF +N RL+      + +    L  + G  
Sbjct: 160 KTVFD---------------PHRPFAIDMAGFAVNLRLIL----QRSQAYFKLRGVKGGY 200

Query: 390 DIESPLSLLKDQSMVEPLGNCGRQVIVWWLRVEARSDSKFPPG 432
              S L  L   + +EP      +++VW  R E          
Sbjct: 201 QESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKK 243
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} Length = 261 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query432
d1v82a_252 Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human ( 100.0
d3cu0a1261 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo 100.0
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 94.84
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 94.77
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 93.8
>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-87  Score=644.07  Aligned_cols=229  Identities=31%  Similarity=0.416  Sum_probs=198.5

Q ss_pred             CcEEEEEccCCccchhhHHHHhhhhhccCCCCCeEEEEEeCCC-CCHHHHHHHhhCCCceeeeecCCCC-------CCCc
Q 013985          159 PRTLIVVTPTYVRTFQTLHLTGVMHSLMLVPYDLVWIVVEAGG-VTNETASLIAKSKLRTIHVGVDQKM-------PASW  230 (432)
Q Consensus       159 ~~~IivVTPTy~R~~Q~a~LTRLa~TL~lVp~~L~WIVVEd~~-~t~~va~lL~~sgl~y~HL~~~~~~-------p~~~  230 (432)
                      .|+||||||||.|++|+|||||||||||||| +||||||||++ +|++|+++|++|||+|+||+++++.       -+.|
T Consensus         1 lp~I~vVTPTy~R~~Q~~~LtRLa~TL~lVp-~l~WIVVEda~~~t~~va~lL~~sgl~y~HL~~~~p~~~~~~~~~~~~   79 (252)
T d1v82a_           1 LPTIHVVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDP   79 (252)
T ss_dssp             CCEEEEEEEECCSTTHHHHHHHHHHHHTTCS-SEEEEEEESSSSCCHHHHHHHHHHCCEEEEEECCCCHHHHCCC-----
T ss_pred             CCCEEEECCCCCchhhHHHHHHHHhHHhcCC-CceEEEEeCCCCCCHHHHHHHHHcCCceEeeccCCCcccccccccccc
Confidence            4899999999999999999999999999998 89999999875 7999999999999999999997431       0123


Q ss_pred             CCCchhhHHHHHHHHHHHHh-----ccCCeEEEEecCCCccchhhhhhhcceeeeeEEEeeEEeecCCCccchhhhhhhh
Q 013985          231 GGRHQLEAKMRLRALRIVRE-----EKLDGIVMFADDSNMHSMELFDEIQNVKWFGAVSVGILALAGNQDESSSVIMEKE  305 (432)
Q Consensus       231 ~~r~~~~~~qRN~AL~~IR~-----~~~~GVVyFADDDNtYdl~LFdemR~tk~vgvWPVGlv~~~Gg~~~~~~~~~~~~  305 (432)
                      ..+++  ..|||.||+|||+     ++++||||||||||+||++||||||+||+||+||||++   ||+           
T Consensus        80 ~~~rg--~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdemR~ik~vgvWPVglv---g~~-----------  143 (252)
T d1v82a_          80 RIPRG--TMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFV---GGL-----------  143 (252)
T ss_dssp             CCCTT--HHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHHTTCSSEEECCEESC---TTS-----------
T ss_pred             ccccc--HHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHHhhcceEEEEeeEee---ccc-----------
Confidence            33333  4699999999997     57899999999999999999999999999999999999   653           


Q ss_pred             cCCCCCccccccceecCCCCeEEEEecCCCccccccccccccccccCCcccccceeeeeeccccccccCCCccccccccc
Q 013985          306 EGGENTAMPVQGPACNSSNNLVGWHTFNSLPYARKSATYIDDRATVLPRKLEWAGFVLNSRLLWKEAKDKPEWVNDLDLL  385 (432)
Q Consensus       306 ~~~~~~~v~vEGP~cn~sgkVvGWht~~~~p~~~~sa~~~~drap~rpf~IDMAGFA~Ns~LLw~~~~~kp~~~~d~~~~  385 (432)
                              .||||+||++|||+|||+.|.               |.|||||||||||||+++||+++++.+.    .+++
T Consensus       144 --------~vEgP~~~~~gkVvgw~t~w~---------------~~R~fpidmAGFA~N~~lL~~~p~~~~~----~~~~  196 (252)
T d1v82a_         144 --------RYEAPRVNGAGKVVRWKTVFD---------------PHRPFAIDMAGFAVNLRLILQRSQAYFK----LRGV  196 (252)
T ss_dssp             --------SEEEEEECTTSCEEEEECSSC---------------TTSTTCCCGGGEEEEHHHHHHSTTCCCC----CSSC
T ss_pred             --------cccCceEcCCCcEEEEecCCC---------------CCCCccccceeeEeehHhhhcCcccccC----cccC
Confidence                    599999998899999999873               7799999999999999999997665443    3444


Q ss_pred             CCCccccc-cccccCCCCcccccCCCCCEEEEEecccCCCCCCCCCCC
Q 013985          386 DGLEDIES-PLSLLKDQSMVEPLGNCGRQVIVWWLRVEARSDSKFPPG  432 (432)
Q Consensus       386 ~~~~~iEs-~L~lL~d~~~lEPla~cc~~VLVWHtRtE~~~~sk~P~~  432 (432)
                      ++ +++|| +|..|.+.+++||+|+||++|||||||||+|.++++|++
T Consensus       197 ~~-G~qes~fl~~Lv~~~~lEpla~~cskVlvWhtrte~p~l~~e~~~  243 (252)
T d1v82a_         197 KG-GYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKK  243 (252)
T ss_dssp             CT-TCHHHHHHHHHCCGGGEEECHHHHTSCCEECCCBCCCCCGGGTTT
T ss_pred             CC-cchhhHHHHHcccHHhCccccCCCCEEEEEEcccCCccccccccC
Confidence            44 47777 676667899999999999999999999999999998864
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure