Citrus Sinensis ID: 014012
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | ||||||
| 18402564 | 452 | uncharacterized protein [Arabidopsis tha | 0.981 | 0.938 | 0.787 | 0.0 | |
| 297834964 | 451 | extracellular ligand-gated ion channel [ | 0.997 | 0.955 | 0.777 | 0.0 | |
| 449466580 | 434 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.993 | 0.742 | 0.0 | |
| 225460869 | 435 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.988 | 0.709 | 0.0 | |
| 224056355 | 433 | predicted protein [Populus trichocarpa] | 0.976 | 0.974 | 0.774 | 0.0 | |
| 147861419 | 435 | hypothetical protein VITISV_007068 [Viti | 0.995 | 0.988 | 0.709 | 0.0 | |
| 9294547 | 430 | unnamed protein product [Arabidopsis tha | 0.930 | 0.934 | 0.745 | 0.0 | |
| 297852764 | 448 | predicted protein [Arabidopsis lyrata su | 0.979 | 0.944 | 0.739 | 1e-177 | |
| 356569734 | 465 | PREDICTED: uncharacterized protein LOC10 | 0.974 | 0.905 | 0.711 | 1e-176 | |
| 356524291 | 441 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.961 | 0.729 | 1e-175 |
| >gi|18402564|ref|NP_566658.1| uncharacterized protein [Arabidopsis thaliana] gi|18377809|gb|AAL67091.1| AT3g20300/MQC12_5 [Arabidopsis thaliana] gi|21537221|gb|AAM61562.1| unknown [Arabidopsis thaliana] gi|22655008|gb|AAM98095.1| AT3g20300/MQC12_5 [Arabidopsis thaliana] gi|332642840|gb|AEE76361.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/428 (78%), Positives = 370/428 (86%), Gaps = 4/428 (0%)
Query: 9 LTNRRKNLSRSISHAQDELHSFRSYLKWMCVDQSNCFTACLSWSMFVLFTIVVPAISHFV 68
L NR +RS+SHAQDELHSFR YL+WMCVDQS+ +TA LSWSMFV+FT+VVPA SHF+
Sbjct: 25 LINRENKFTRSVSHAQDELHSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLVVPATSHFM 84
Query: 69 LACDTCDGTHKRPYDGVVQLSLSSVAALSFICLSSFVKKYGLRRFLFLDKLCDESEMVRS 128
LAC CD H RPYD VVQLSLSS AALSF+CLS FV KYGLRRFLF DKL DESE VR
Sbjct: 85 LACSDCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDESETVRL 144
Query: 129 RYMEQLNRSLKILSIFVLPCFLVESAYKIWWYASGASQIPFLGNVYLSDTVACIMELCSW 188
Y QLNRSLKILS FV PCFL S+YKIWWYASGASQIPFLGNV LSDTVAC+MELCSW
Sbjct: 145 GYTNQLNRSLKILSYFVSPCFLAMSSYKIWWYASGASQIPFLGNVILSDTVACLMELCSW 204
Query: 189 LYRTTVIFLVCVLFRLVCHLQILRLLDFAQVFQTDSDVDSVLAEHLRIRKHLRIISHRYR 248
LYRTTVIFLVCVLFRL+CHLQILRL DFAQVFQ DSDV S+L+EHLRIR+HLRIISHRYR
Sbjct: 205 LYRTTVIFLVCVLFRLICHLQILRLQDFAQVFQMDSDVGSILSEHLRIRRHLRIISHRYR 264
Query: 249 AFILWFLIMVTGSQFASLLMTTKPSAVVNIYIAGELALCSMTLVAGLLILLRSATKITHK 308
FIL LI+VTGSQF SLL+TTK A +NIY AGELALCSMTLV LLILLRSA+KITHK
Sbjct: 265 TFILLSLILVTGSQFYSLLITTKAYAELNIYRAGELALCSMTLVTALLILLRSASKITHK 324
Query: 309 AQAVTCLAAKWHVCATVDSFDVNDGETPRIPD-AAGRAFPIC---HGESDCDDAGDEEDD 364
AQAVTCLAAKWHVCAT++SF+ DGETPR+ D A+G + +GESD +D GDEEDD
Sbjct: 325 AQAVTCLAAKWHVCATIESFETVDGETPRLVDRASGHGYYPTDDDNGESDSEDYGDEEDD 384
Query: 365 LDNSNLIPAYAYSTISFQKRQALVNYFENNRAGITVFGFTLDRSTLHTIFGIQLSLVLWL 424
DN+NLIPAYAYSTISFQKRQALVNYFENNR+GITVFGFTLDRSTLHTIFGI++SLVLWL
Sbjct: 385 FDNNNLIPAYAYSTISFQKRQALVNYFENNRSGITVFGFTLDRSTLHTIFGIEMSLVLWL 444
Query: 425 LGKTVGLS 432
LGKT+G+S
Sbjct: 445 LGKTIGIS 452
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297834964|ref|XP_002885364.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp. lyrata] gi|297331204|gb|EFH61623.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|449466580|ref|XP_004151004.1| PREDICTED: uncharacterized protein LOC101212672 [Cucumis sativus] gi|449482633|ref|XP_004156355.1| PREDICTED: uncharacterized protein LOC101230635 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225460869|ref|XP_002277314.1| PREDICTED: uncharacterized protein LOC100245205 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224056355|ref|XP_002298818.1| predicted protein [Populus trichocarpa] gi|222846076|gb|EEE83623.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147861419|emb|CAN83979.1| hypothetical protein VITISV_007068 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|9294547|dbj|BAB02810.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297852764|ref|XP_002894263.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297340105|gb|EFH70522.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356569734|ref|XP_003553051.1| PREDICTED: uncharacterized protein LOC100817487 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356524291|ref|XP_003530763.1| PREDICTED: uncharacterized protein LOC100806904 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | ||||||
| TAIR|locus:2092424 | 452 | AT3G20300 [Arabidopsis thalian | 0.981 | 0.938 | 0.735 | 5.4e-166 | |
| TAIR|locus:2008046 | 453 | AT1G50630 [Arabidopsis thalian | 0.976 | 0.931 | 0.667 | 9.8e-151 | |
| TAIR|locus:2132045 | 437 | MRB1 "AT4G22270" [Arabidopsis | 0.921 | 0.910 | 0.533 | 3.9e-108 | |
| TAIR|locus:2141481 | 453 | AT4G03820 "AT4G03820" [Arabido | 0.921 | 0.878 | 0.492 | 1.4e-101 | |
| TAIR|locus:2047032 | 414 | AT2G21080 "AT2G21080" [Arabido | 0.710 | 0.741 | 0.347 | 1.1e-60 | |
| TAIR|locus:2008828 | 456 | AT1G67570 "AT1G67570" [Arabido | 0.909 | 0.861 | 0.309 | 1.6e-54 |
| TAIR|locus:2092424 AT3G20300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1615 (573.6 bits), Expect = 5.4e-166, P = 5.4e-166
Identities = 315/428 (73%), Positives = 347/428 (81%)
Query: 9 LTNRRKNLSRSISHAQDELHSFRSYLKWMCVDQSNCFTACLSWSMFVLFTIVVPAISHFV 68
L NR +RS+SHAQDELHSFR YL+WMCVDQS+ +TA LSWSMFV+FT+VVPA SHF+
Sbjct: 25 LINRENKFTRSVSHAQDELHSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLVVPATSHFM 84
Query: 69 LACDTCDGTHKRPYDGXXXXXXXXXXXXXFICLSSFVKKYGLRRFLFLDKLCDESEMVRS 128
LAC CD H RPYD F+CLS FV KYGLRRFLF DKL DESE VR
Sbjct: 85 LACSDCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDESETVRL 144
Query: 129 RYMEQLNRSLKILSIFVLPCFLVESAYKIWWYASGASQIPFLGNVYLSDTVACIMELCSW 188
Y QLNRSLKILS FV PCFL S+YKIWWYASGASQIPFLGNV LSDTVAC+MELCSW
Sbjct: 145 GYTNQLNRSLKILSYFVSPCFLAMSSYKIWWYASGASQIPFLGNVILSDTVACLMELCSW 204
Query: 189 LYRTTVIFLVCVLFRLVCHLQILRLLDFAQVFQTDSDVDSVLAEHLRIRKHLRIISHRYR 248
LYRTTVIFLVCVLFRL+CHLQILRL DFAQVFQ DSDV S+L+EHLRIR+HLRIISHRYR
Sbjct: 205 LYRTTVIFLVCVLFRLICHLQILRLQDFAQVFQMDSDVGSILSEHLRIRRHLRIISHRYR 264
Query: 249 AFILWFLIMVTGSQFASLLMTTKPSAVVNIYIAGELALCSMTLVAGLLILLRSATKITHK 308
FIL LI+VTGSQF SLL+TTK A +NIY AGELALCSMTLV LLILLRSA+KITHK
Sbjct: 265 TFILLSLILVTGSQFYSLLITTKAYAELNIYRAGELALCSMTLVTALLILLRSASKITHK 324
Query: 309 AQAVTCLAAKWHVCATVDSFDVNDGETPRIPD-AAGRAF-PIC--HGXXXXXXXXXXXXX 364
AQAVTCLAAKWHVCAT++SF+ DGETPR+ D A+G + P +G
Sbjct: 325 AQAVTCLAAKWHVCATIESFETVDGETPRLVDRASGHGYYPTDDDNGESDSEDYGDEEDD 384
Query: 365 XXNSNLIPAYAYSTISFQKRQALVNYFENNRAGITVFGFTLDRSTLHTIFGIQLSLVLWL 424
N+NLIPAYAYSTISFQKRQALVNYFENNR+GITVFGFTLDRSTLHTIFGI++SLVLWL
Sbjct: 385 FDNNNLIPAYAYSTISFQKRQALVNYFENNRSGITVFGFTLDRSTLHTIFGIEMSLVLWL 444
Query: 425 LGKTVGLS 432
LGKT+G+S
Sbjct: 445 LGKTIGIS 452
|
|
| TAIR|locus:2008046 AT1G50630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2132045 MRB1 "AT4G22270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2141481 AT4G03820 "AT4G03820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2047032 AT2G21080 "AT2G21080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008828 AT1G67570 "AT1G67570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| AT3G20300 | unknown protein; unknown protein; EXPRESSED IN- 13 plant structures; EXPRESSED DURING- 8 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G50630.1); Has 80 Blast hits to 80 proteins in 8 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink). (452 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
| AT5G25430 | • | 0.595 | |||||||||
| VATG3 | • | 0.575 | |||||||||
| AT1G57550 | • | 0.534 | |||||||||
| AT2G24040 | • | 0.467 | |||||||||
| ATCNGC7 | • | 0.463 | |||||||||
| AT1G71680 | • | 0.439 | |||||||||
| ATCNGC8 | • | 0.409 | |||||||||
| NIP4;1 | • | 0.408 | |||||||||
| AHA6 | • | 0.408 | |||||||||
| ATOPT9 | • | 0.407 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 432 | |||
| pfam12056 | 398 | pfam12056, DUF3537, Protein of unknown function (D | 0.0 |
| >gnl|CDD|221398 pfam12056, DUF3537, Protein of unknown function (DUF3537) | Back alignment and domain information |
|---|
Score = 578 bits (1492), Expect = 0.0
Identities = 248/400 (62%), Positives = 301/400 (75%), Gaps = 7/400 (1%)
Query: 22 HAQDELHSFRSYLKWMCVDQSNCFTACLSWSMFVLFTIVVPAISHFVLACDTCDGTHKRP 81
H QDEL SFRS L+W+C D S+ A LSWS+F L + VPAISHF+L C CD H+RP
Sbjct: 1 HDQDELRSFRSLLRWVCFDHSSPCGAALSWSVFFLLAVAVPAISHFLLPCRDCDFDHRRP 60
Query: 82 YDGVVQLSLSSVAALSFICLSSFVKKYGLRRFLFLDKLCDESEMVRSRYMEQLNRSLKIL 141
+D +VQLSLS+ AA+SF+CLS + +KYGLR+FLFLDKL D+S+ VR Y ++ RS ++L
Sbjct: 61 FDVLVQLSLSAFAAVSFLCLSRWFRKYGLRKFLFLDKLSDDSDRVRLGYTAEIKRSFRLL 120
Query: 142 SIFVLPCFLVESAYKIWWYASGASQIPFLGNVYLSDTVACIMELCSWLYRTTVIFLVCVL 201
+ FVLPCFL+E+ YKIWWYASG SQIPF+GN LS +VAC +EL SW+YRTT+ LVCVL
Sbjct: 121 AYFVLPCFLLEAVYKIWWYASGGSQIPFIGNPVLSLSVACTLELASWMYRTTIFLLVCVL 180
Query: 202 FRLVCHLQILRLLDFAQVFQTDSDVDSVLAEHLRIRKHLRIISHRYRAFILWFLIMVTGS 261
FRL+CHLQILRL DFA++F+ +SDV+SVL EHLRIR+ L IISHR+R FIL L++VT S
Sbjct: 181 FRLICHLQILRLDDFAKLFEGESDVESVLKEHLRIRRQLSIISHRFRKFILLSLLLVTAS 240
Query: 262 QFASLLMTTKPSAVVNIYIAGELALCSMTLVAGLLILLRSATKITHKAQAVTCLAAKWHV 321
QFA+LL+TT S VNI GELALCS+ LV+GL I L SA KITHKAQAVT LA+KWH
Sbjct: 241 QFAALLLTTAASGEVNILNGGELALCSVVLVSGLFICLHSAAKITHKAQAVTSLASKWHA 300
Query: 322 CATVDSFDVNDGETPR-----IPDAAGRAFPICHGESDCDDAGDEEDDLDNSNLIPAYAY 376
CAT SFD ETP S D++GDEEDDLDN+ ++P+YA
Sbjct: 301 CATCSSFDTTVDETPTSVLLPAASNLVLRPVSSSSSSS-DESGDEEDDLDNTKIMPSYA- 358
Query: 377 STISFQKRQALVNYFENNRAGITVFGFTLDRSTLHTIFGI 416
TISFQKRQALV Y ENNRAGITV+GFT+DR+ LHTIF I
Sbjct: 359 RTISFQKRQALVTYLENNRAGITVYGFTVDRTWLHTIFMI 398
|
This family of transmembrane proteins are functionally uncharacterized. This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length. Length = 398 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 432 | |||
| PF12056 | 398 | DUF3537: Protein of unknown function (DUF3537); In | 100.0 | |
| PF08395 | 372 | 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013 | 97.18 | |
| PF02949 | 313 | 7tm_6: 7tm Odorant receptor; InterPro: IPR004117 A | 84.05 |
| >PF12056 DUF3537: Protein of unknown function (DUF3537); InterPro: IPR021924 This family of transmembrane proteins are functionally uncharacterised | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-172 Score=1289.42 Aligned_cols=394 Identities=59% Similarity=1.017 Sum_probs=378.0
Q ss_pred chhHHHHHHHHHhhhheecCCCcchhHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCCcchhhhhhhhHHHHHHHHHh
Q 014012 22 HAQDELHSFRSYLKWMCVDQSNCFTACLSWSMFVLFTIVVPAISHFVLACDTCDGTHKRPYDGVVQLSLSSVAALSFICL 101 (432)
Q Consensus 22 ~~~deLr~fr~~L~w~~ldqSs~~~~~~Sw~~F~ll~v~vP~~~~~~~~c~~cd~~~~~~f~~~Vq~s~s~lAavsf~cL 101 (432)
|++||||+||++|+|||+||||++++++||++|+++|++||++++++++|++||++|++|||++||+|||++|+|||+||
T Consensus 1 h~~deL~~fr~~L~w~~~dqSs~~~~~~Sw~~F~ll~v~vP~~~~~~~~c~~cd~~~~~~f~~~Vq~s~s~lAavsf~cL 80 (398)
T PF12056_consen 1 HARDELRSFRSFLRWCGLDQSSPLSAALSWSVFLLLAVAVPAASHFLLSCPSCDKYHIRPFEKLVQLSQSALAAVSFLCL 80 (398)
T ss_pred CchhHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhcCCCchhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccceeecccccCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhheeeeeccccCCccccccchhhHHH
Q 014012 102 SSFVKKYGLRRFLFLDKLCDESEMVRSRYMEQLNRSLKILSIFVLPCFLVESAYKIWWYASGASQIPFLGNVYLSDTVAC 181 (432)
Q Consensus 102 S~~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~~sfRlLa~~vLPcf~~e~a~ki~w~~~v~~~~P~~~~~~~~~~v~~ 181 (432)
|||+||||||||||+||++|||++||+||++||++|||+|++|+||||++|+|||||||++++.++||+++++++|++||
T Consensus 81 S~~~rkyGlRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~~~ki~~~~~~~~~~P~~~~~~~~~sva~ 160 (398)
T PF12056_consen 81 SHFLRKYGLRRFLFLDKLRDDSEEVRRGYTRQLNRSFRLLACWVLPCFLVEAAYKIWWYSSVAVQIPYIGHPSWWNSVAC 160 (398)
T ss_pred HHHhHhcCceeeeeecccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEeeccccCCccCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccchhHhhhcccCCHHHHHHHHHHHHHHHhHhhhhhHHHHHHHHHHHHHH
Q 014012 182 IMELCSWLYRTTVIFLVCVLFRLVCHLQILRLLDFAQVFQTDSDVDSVLAEHLRIRKHLRIISHRYRAFILWFLIMVTGS 261 (432)
Q Consensus 182 ~~~l~SW~YrT~ifll~CVLFrLiC~LQiLR~~~~~klfe~~sdv~~il~EH~RIR~qL~~ISHRfR~Fil~~ll~VTaS 261 (432)
+++++||+|||+|||++||||||+|||||||||||+|+||+++||++||+||+|||+||+|||||||+|||++|++||+|
T Consensus 161 ~l~l~SW~YrT~ifl~~CvLFrLiC~LQiLr~~~~~klfe~~sdv~~il~EH~RiR~qL~~ISHRfR~Fil~~l~~VTaS 240 (398)
T PF12056_consen 161 LLELASWLYRTTIFLLVCVLFRLICNLQILRFEGYAKLFERDSDVGVILEEHLRIRRQLSKISHRFRIFILLSLLLVTAS 240 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhheehHhHHHHHccCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceeeEEecCcchhhhHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhcccCCCCCCCCCCCCCC
Q 014012 262 QFASLLMTTKPSAVVNIYIAGELALCSMTLVAGLLILLRSATKITHKAQAVTCLAAKWHVCATVDSFDVNDGETPRIPDA 341 (432)
Q Consensus 262 Qf~sLl~~t~~~~~inf~~~GDLavcS~vqv~Gl~icL~~AaKITHRAQ~I~siAskWHa~aT~~s~d~~~~~~p~~~~~ 341 (432)
||++||+||++++++||+|+|||||||+|||+|++||||||||||||||+|||+||||||++||+|+|++++|+|+....
T Consensus 241 Qf~sLl~~t~~~~~inf~~~GdlavcS~vqv~Gl~iCL~~AaKITHrAQ~I~siAskWHa~aTc~s~d~~~~~~p~~~~~ 320 (398)
T PF12056_consen 241 QFVSLLQTTRSKGDINFFNAGDLAVCSVVQVSGLFICLHGAAKITHRAQAITSIASKWHACATCSSFDSDQGETPTSDSL 320 (398)
T ss_pred HHHHHHHHhccccceeEeeccceeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheecccccccccCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888788874411
Q ss_pred ---CCCCCC-CCCCCCCCCCCCCCCccCCCCcccccccccchhHHHHHHHHHHhhhCCCceEEEEEeeehhhHHHHHHH
Q 014012 342 ---AGRAFP-ICHGESDCDDAGDEEDDLDNSNLIPAYAYSTISFQKRQALVNYFENNRAGITVFGFTLDRSTLHTIFGI 416 (432)
Q Consensus 342 ---~~~~~~-~~~~~~~~d~~~~~~d~~d~~~~~~~~~~~~~SfqkRQAlVtYLq~N~~GITvfGf~lDR~~LhTIF~~ 416 (432)
+++.++ ..+.+.+|||++||+|+.||+++.|+|+ +++||||||||||||||||||||||||+|||||||||||+
T Consensus 321 ~~~~~~~~~~~~~~~~sd~es~d~~~~~~~~~~~~~~~-~~~SfqKRQALVtYLq~N~aGITvfGf~lDR~~LhTIF~i 398 (398)
T PF12056_consen 321 SAAANPFPSAGINSSSSDDESGDEEDDLDNTKQLPSYA-DMISFQKRQALVTYLQNNRAGITVFGFVLDRGLLHTIFMI 398 (398)
T ss_pred ccccccccCCCCCCCccchhhcccCCCCCccccccccc-hhHHHHHHHHHHHHHhcCCCCeEEEEEEeehHHHHHHhhC
Confidence 122222 4455666777778889999999999997 7999999999999999999999999999999999999985
|
This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length. |
| >PF08395 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013604 This family includes a number of gustatory and odorant receptors mainly from insect species such as Anopheles gambiae (African malaria mosquito) and Drosophila melanogaster (Fruit fly) | Back alignment and domain information |
|---|
| >PF02949 7tm_6: 7tm Odorant receptor; InterPro: IPR004117 All known members of this group are seven-transmembrane proteins that are candidate odorant receptors in Drosophila | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 432 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 4e-06
Identities = 43/280 (15%), Positives = 76/280 (27%), Gaps = 82/280 (29%)
Query: 8 LLTNRRKNLSRSISHAQDELHSFRSYLKWMCVDQSNCFTACLSWSMFVLFTIVVPAISHF 67
LLT R K ++ +S + L S T S+ + +
Sbjct: 269 LLTTRFKQVTDFLS----AATTTHISL----DHHSMTLTPDEVKSLLLKYL----DCRPQ 316
Query: 68 VLACDTCDGTHKRPYDGVVQLSLSSVAAL--SFICLSSFVKKYGLRRF-----LFLDKLC 120
L + P LS +A + K + L+ L
Sbjct: 317 DLPREVLTTN---P------RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL- 366
Query: 121 DESEMVRSRYMEQLNRSLKILSIFV----LPCFLVESAYKIWWYASGASQIPFLGNVYLS 176
+ +E R + LS+F +P + W+ +
Sbjct: 367 EPAEY-RKMFDR--------LSVFPPSAHIP----TILLSLIWFDV------------IK 401
Query: 177 DTVACIMELCS-------WLYRTTVIFLVCVLFRLVCHLQIL-----RLLD---FAQVFQ 221
V ++ +T I + + L L+ ++D + F
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKEST-ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD 460
Query: 222 TDS----DVDSVLAEHLRIRKHLRII--SHRYRAFILWFL 255
+D +D H I HL+ I R F + FL
Sbjct: 461 SDDLIPPYLDQYFYSH--IGHHLKNIEHPERMTLFRMVFL 498
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00