Citrus Sinensis ID: 014083

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-
MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGT
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccEEEccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHcccccccEEEccccHHHHHHHcccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccEEcccccccccccccccEEEEEcccccccccccccccccccccccHHHHHHccccccEEEcccccccccccHHHHHHHHHHcccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccEEEEcccccHHHHHHHHHHHHccccccc
ccccccccEEEEcccccEEEccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEHEEEEEcccccccccccccccEEcHHHHHHHccHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHHHccccEEEEccHHHHHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccHHHHHHHHHHHHccEEEEEcccccccccHccccEEEEEcccccccHHccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccEEHHHHcccccccHEEEEcccccHHHHHHHHHHHccccccc
mynggmagltywspnvnifrdprwgrgqetpgedpvltgkYAASYVrglqgntgsrlKVAACCKHytaydldnwngvdryhfnarvskqdledtynvpfkACVVEGKVASVMCSynqvngkptcadpdilkntihgqwrldgyivsdcdsvgvlyntqhytrtpeEAAADAIKAgldldcgpflaihtegavrggllrEEDVNLALAYTITVQMRlgmfdgepsaqpfgnlgprdvctpAHQQLALQAAHQGIVLLKNsartlplstlrhhtvavigpnsdvTVTMIGNYAgvacgyttplqgISRYAKTIHQAgcfgvacngnqLIGAAEVAARQADATVLVMGLDQSIEAEFIDRaglllpgrQQELVSRVAKASRGPVVLVLMCggpvdvsfakndprigailwvgypgqaggAAIADVLFGRANPGT
MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGlqgntgsrLKVAACCKHYTAYDLDNWNGVDRYHFNARVskqdledtynVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTvavigpnsdVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGT
MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPahqqlalqaahqGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGT
*****MAGLTYWSPNVNIFRDPRWGR********PVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGE****PFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFG******
*YNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPG*
MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGT
*Y**GMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRAN***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query431 2.2.26 [Sep-21-2011]
Q9FGY1 774 Beta-D-xylosidase 1 OS=Ar yes no 0.993 0.552 0.812 0.0
Q94KD8 768 Probable beta-D-xylosidas no no 0.997 0.559 0.765 0.0
Q9FLG1 784 Beta-D-xylosidase 4 OS=Ar no no 0.990 0.544 0.652 1e-165
A5JTQ3 774 Beta-xylosidase/alpha-L-a N/A no 0.993 0.552 0.631 1e-162
A5JTQ2 774 Beta-xylosidase/alpha-L-a N/A no 0.993 0.552 0.631 1e-162
Q9LXD6 773 Beta-D-xylosidase 3 OS=Ar no no 0.990 0.552 0.634 1e-159
Q9LJN4 781 Probable beta-D-xylosidas no no 0.993 0.548 0.609 1e-158
Q9SGZ5 767 Probable beta-D-xylosidas no no 0.995 0.559 0.535 1e-141
Q9LXA8 792 Probable beta-D-xylosidas no no 0.995 0.541 0.481 1e-128
P83344 461 Putative beta-D-xylosidas N/A no 0.607 0.568 0.835 1e-119
>sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 Back     alignment and function desciption
 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/431 (81%), Positives = 387/431 (89%), Gaps = 3/431 (0%)

Query: 1   MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNT-GSRLKV 59
           MYNGG+AGLTYWSPNVNI RDPRWGRGQETPGEDP++  KYAASYVRGLQG   G+RLKV
Sbjct: 149 MYNGGVAGLTYWSPNVNILRDPRWGRGQETPGEDPIVAAKYAASYVRGLQGTAAGNRLKV 208

Query: 60  AACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVN 119
           AACCKHYTAYDLDNWNGVDR+HFNA+V++QDLEDTYNVPFK+CV EGKVASVMCSYNQVN
Sbjct: 209 AACCKHYTAYDLDNWNGVDRFHFNAKVTQQDLEDTYNVPFKSCVYEGKVASVMCSYNQVN 268

Query: 120 GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLD 179
           GKPTCAD ++LKNTI GQWRL+GYIVSDCDSV V +N QHYT TPEEAAA +IKAGLDLD
Sbjct: 269 GKPTCADENLLKNTIRGQWRLNGYIVSDCDSVDVFFNQQHYTSTPEEAAARSIKAGLDLD 328

Query: 180 CGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTP 239
           CGPFLAI TEGAV+ GLL E D+NLALA T+TVQMRLGMFDG  +  P+ NLGPRDVCTP
Sbjct: 329 CGPFLAIFTEGAVKKGLLTENDINLALANTLTVQMRLGMFDG--NLGPYANLGPRDVCTP 386

Query: 240 AHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTT 299
           AH+ LAL+AAHQGIVLLKNSAR+LPLS  RH TVAVIGPNSDVT TMIGNYAG AC YT+
Sbjct: 387 AHKHLALEAAHQGIVLLKNSARSLPLSPRRHRTVAVIGPNSDVTETMIGNYAGKACAYTS 446

Query: 300 PLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAG 359
           PLQGISRYA+T+HQAGC GVAC GNQ  GAAE AAR+ADATVLVMGLDQSIEAE  DR G
Sbjct: 447 PLQGISRYARTLHQAGCAGVACKGNQGFGAAEAAAREADATVLVMGLDQSIEAETRDRTG 506

Query: 360 LLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAI 419
           LLLPG QQ+LV+RVA+ASRGPV+LVLM GGP+DV+FAKNDPR+ AI+W GYPGQAGGAAI
Sbjct: 507 LLLPGYQQDLVTRVAQASRGPVILVLMSGGPIDVTFAKNDPRVAAIIWAGYPGQAGGAAI 566

Query: 420 ADVLFGRANPG 430
           A+++FG ANPG
Sbjct: 567 ANIIFGAANPG 577
Involved in pectic arabinan modification in mucilage secretory cells. Acts also as a beta-D-xylosidase during the remodeling of xylans in vascular development.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 5
>sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 Back     alignment and function description
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 Back     alignment and function description
>sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 Back     alignment and function description
>sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 Back     alignment and function description
>sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 Back     alignment and function description
>sp|P83344|XYNB_PRUPE Putative beta-D-xylosidase (Fragment) OS=Prunus persica PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query431
183579871 769 arabinofuranosidase [Citrus unshiu] 0.997 0.559 0.988 0.0
224111912 768 predicted protein [Populus trichocarpa] 0.993 0.557 0.874 0.0
255556320 782 Periplasmic beta-glucosidase precursor, 0.997 0.549 0.860 0.0
408354264 775 alpha-L-arabinofuranosidase/beta-D-xylos 0.997 0.554 0.853 0.0
408354266 775 alpha-L-arabinofuranosidase/beta-D-xylos 0.997 0.554 0.853 0.0
224099193 755 predicted protein [Populus trichocarpa] 0.995 0.568 0.867 0.0
298364130 774 alpha-L-arabinofuranosidase/beta-D-xylos 0.995 0.554 0.816 0.0
32481073 767 auxin-induced beta-glucosidase [Chenopod 0.997 0.560 0.823 0.0
357442285 765 Beta xylosidase [Medicago truncatula] gi 0.997 0.562 0.797 0.0
356529243 774 PREDICTED: beta-D-xylosidase 1-like [Gly 0.997 0.555 0.809 0.0
>gi|183579871|dbj|BAG28345.1| arabinofuranosidase [Citrus unshiu] Back     alignment and taxonomy information
 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/430 (98%), Positives = 425/430 (98%)

Query: 1   MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVA 60
           MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVL GKYAASYVR LQGNTGSRLKVA
Sbjct: 142 MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGKYAASYVRRLQGNTGSRLKVA 201

Query: 61  ACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNG 120
           ACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNG
Sbjct: 202 ACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNG 261

Query: 121 KPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDC 180
           KPTCADPDILKNTI GQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDC
Sbjct: 262 KPTCADPDILKNTIRGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDC 321

Query: 181 GPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPA 240
           GPFLAIHTEGAVRGGLLREEDVNLA AYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPA
Sbjct: 322 GPFLAIHTEGAVRGGLLREEDVNLASAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPA 381

Query: 241 HQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTP 300
           HQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTP
Sbjct: 382 HQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTP 441

Query: 301 LQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGL 360
           LQGISRYAKTIHQAGC GVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGL
Sbjct: 442 LQGISRYAKTIHQAGCLGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGL 501

Query: 361 LLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIA 420
           LLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIA
Sbjct: 502 LLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIA 561

Query: 421 DVLFGRANPG 430
           DVLFGRANPG
Sbjct: 562 DVLFGRANPG 571

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224111912|ref|XP_002316021.1| predicted protein [Populus trichocarpa] gi|222865061|gb|EEF02192.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255556320|ref|XP_002519194.1| Periplasmic beta-glucosidase precursor, putative [Ricinus communis] gi|223541509|gb|EEF43058.1| Periplasmic beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|408354264|gb|AFU54451.1| alpha-L-arabinofuranosidase/beta-D-xylosidase [Prunus salicina] Back     alignment and taxonomy information
>gi|408354266|gb|AFU54452.1| alpha-L-arabinofuranosidase/beta-D-xylosidase [Prunus salicina] Back     alignment and taxonomy information
>gi|224099193|ref|XP_002311398.1| predicted protein [Populus trichocarpa] gi|222851218|gb|EEE88765.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|298364130|gb|ADI79208.1| alpha-L-arabinofuranosidase/beta-D-xylosidase [Malus x domestica] Back     alignment and taxonomy information
>gi|32481073|gb|AAP83934.1| auxin-induced beta-glucosidase [Chenopodium rubrum] Back     alignment and taxonomy information
>gi|357442285|ref|XP_003591420.1| Beta xylosidase [Medicago truncatula] gi|355480468|gb|AES61671.1| Beta xylosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356529243|ref|XP_003533205.1| PREDICTED: beta-D-xylosidase 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query431
TAIR|locus:2157994 774 BXL1 "beta-xylosidase 1" [Arab 0.993 0.552 0.791 2.3e-188
TAIR|locus:2196060 768 BXL2 "beta-xylosidase 2" [Arab 0.997 0.559 0.748 5.7e-178
TAIR|locus:2174809 784 XYL4 "beta-D-xylosidase 4" [Ar 0.990 0.544 0.636 1.6e-148
TAIR|locus:2144756 773 BXL3 "AT5G09730" [Arabidopsis 0.990 0.552 0.622 1.2e-143
TAIR|locus:2091236 781 AT3G19620 [Arabidopsis thalian 0.993 0.548 0.593 2.7e-139
TAIR|locus:2029391 767 AT1G78060 [Arabidopsis thalian 0.995 0.559 0.517 2.5e-129
TAIR|locus:2142434 792 AT5G10560 [Arabidopsis thalian 0.867 0.472 0.470 2.9e-116
UNIPROTKB|P83344 461 P83344 "Putative beta-D-xylosi 0.607 0.568 0.797 1e-109
ASPGD|ASPL0000029139 763 bxlB [Emericella nidulans (tax 0.974 0.550 0.415 1.7e-82
UNIPROTKB|Q5ATH9 763 bxlB "Exo-1,4-beta-xylosidase 0.974 0.550 0.415 1.7e-82
TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1826 (647.8 bits), Expect = 2.3e-188, P = 2.3e-188
 Identities = 341/431 (79%), Positives = 376/431 (87%)

Query:     1 MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNT-GSRLKV 59
             MYNGG+AGLTYWSPNVNI RDPRWGRGQETPGEDP++  KYAASYVRGLQG   G+RLKV
Sbjct:   149 MYNGGVAGLTYWSPNVNILRDPRWGRGQETPGEDPIVAAKYAASYVRGLQGTAAGNRLKV 208

Query:    60 AACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVN 119
             AACCKHYTAYDLDNWNGVDR+HFNA+V++QDLEDTYNVPFK+CV EGKVASVMCSYNQVN
Sbjct:   209 AACCKHYTAYDLDNWNGVDRFHFNAKVTQQDLEDTYNVPFKSCVYEGKVASVMCSYNQVN 268

Query:   120 GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLD 179
             GKPTCAD ++LKNTI GQWRL+GYIVSDCDSV V +N QHYT TPEEAAA +IKAGLDLD
Sbjct:   269 GKPTCADENLLKNTIRGQWRLNGYIVSDCDSVDVFFNQQHYTSTPEEAAARSIKAGLDLD 328

Query:   180 CGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTP 239
             CGPFLAI TEGAV+ GLL E D+NLALA T+TVQMRLGMFDG  +  P+ NLGPRDVCTP
Sbjct:   329 CGPFLAIFTEGAVKKGLLTENDINLALANTLTVQMRLGMFDG--NLGPYANLGPRDVCTP 386

Query:   240 XXXXXXXXXXXXGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTT 299
                         GIVLLKNSAR+LPLS  RH TVAVIGPNSDVT TMIGNYAG AC YT+
Sbjct:   387 AHKHLALEAAHQGIVLLKNSARSLPLSPRRHRTVAVIGPNSDVTETMIGNYAGKACAYTS 446

Query:   300 PLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAG 359
             PLQGISRYA+T+HQAGC GVAC GNQ  GAAE AAR+ADATVLVMGLDQSIEAE  DR G
Sbjct:   447 PLQGISRYARTLHQAGCAGVACKGNQGFGAAEAAAREADATVLVMGLDQSIEAETRDRTG 506

Query:   360 LLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAI 419
             LLLPG QQ+LV+RVA+ASRGPV+LVLM GGP+DV+FAKNDPR+ AI+W GYPGQAGGAAI
Sbjct:   507 LLLPGYQQDLVTRVAQASRGPVILVLMSGGPIDVTFAKNDPRVAAIIWAGYPGQAGGAAI 566

Query:   420 ADVLFGRANPG 430
             A+++FG ANPG
Sbjct:   567 ANIIFGAANPG 577
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0010214 "seed coat development" evidence=IMP
GO:0046556 "alpha-N-arabinofuranosidase activity" evidence=IDA
TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P83344 P83344 "Putative beta-D-xylosidase" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029139 bxlB [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ATH9 bxlB "Exo-1,4-beta-xylosidase bxlB" [Aspergillus nidulans FGSC A4 (taxid:227321)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FGY1BXL1_ARATH3, ., 2, ., 1, ., 5, 50.81200.99300.5529yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
PLN03080 779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 0.0
PRK15098 765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 6e-60
pfam01915221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 9e-50
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 2e-49
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 1e-46
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information 
 Score =  557 bits (1436), Expect = 0.0
 Identities = 229/440 (52%), Positives = 304/440 (69%), Gaps = 11/440 (2%)

Query: 1   MYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNT------- 53
           MYN G AGLT+W+PN+NIFRDPRWGRGQETPGEDP +   Y+  +V+G QG         
Sbjct: 143 MYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVASAYSVEFVKGFQGGKWKKVRDD 202

Query: 54  --GSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASV 111
               +L ++ACCKHYTAYDL+ W    RY FNA V++QD+EDTY  PFK+C+ EGK + +
Sbjct: 203 GEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCL 262

Query: 112 MCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADA 171
           MCSYNQVNG P CA  D+L+     +W   GYI SDCD+V  ++  Q YT++PE+A AD 
Sbjct: 263 MCSYNQVNGVPACARKDLLQKA-RDEWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADV 321

Query: 172 IKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNL 231
           +KAG+D++CG ++  HT+ A+  G ++EED++ AL    +VQ+RLG+FDG+P    +G L
Sbjct: 322 LKAGMDINCGSYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKL 381

Query: 232 GPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYA 291
           GP +VCT  H++LAL+AA QGIVLLKN  + LPL+     ++A+IGP ++    + G+Y 
Sbjct: 382 GPNNVCTKEHRELALEAARQGIVLLKNDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYT 441

Query: 292 GVACGYTTPLQGISRYA-KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSI 350
           GV C  TT  +G+  Y  KT   AGC  V+CN +   G A   A++AD  V+V GLD S 
Sbjct: 442 GVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDLSQ 501

Query: 351 EAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGY 410
           E E  DR  LLLPG+Q +L+S VA  S+ PVVLVL  GGPVDVSFAK DPRI +ILW+GY
Sbjct: 502 ETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGY 561

Query: 411 PGQAGGAAIADVLFGRANPG 430
           PG+ GG A+A+++FG  NPG
Sbjct: 562 PGEVGGQALAEIIFGDYNPG 581

Length = 779
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 431
PLN03080 779 Probable beta-xylosidase; Provisional 100.0
PRK15098 765 beta-D-glucoside glucohydrolase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 100.0
PF01915227 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter 99.94
COG0486454 ThdF Predicted GTPase [General function prediction 87.99
>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.6e-98  Score=801.82  Aligned_cols=428  Identities=53%  Similarity=1.011  Sum_probs=383.1

Q ss_pred             CCCCcccceeeCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCC---------CCCCeeEEeeccccccCCC
Q 014083            2 YNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNT---------GSRLKVAACCKHYTAYDLD   72 (431)
Q Consensus         2 ~~~~~~G~~~~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~---------~g~~gv~a~~KHfpg~g~~   72 (431)
                      |+.+.+|+++|+|++||.|||||||++|||||||+++++|+.+||+|||+.+         .++.+|++|+||||||+++
T Consensus       144 g~~~~~G~~~~aP~vdi~rdPrwGR~~EtfGEDP~lv~~~a~a~V~GlQ~~~~~~~~~~~~~~~~~V~a~~KHF~g~~~e  223 (779)
T PLN03080        144 YNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVASAYSVEFVKGFQGGKWKKVRDDGEDGKLMLSACCKHYTAYDLE  223 (779)
T ss_pred             ccccccCcceeecccccccCCCcCccccCcCCCHHHHHHHHHHHHHHhcCCCcccccccccCCCceEEEECCeeeCCCcc
Confidence            3455578998999999999999999999999999999999999999999852         1233599999999999988


Q ss_pred             CCCCCCccccccccCHHHHHhhhcHHHHHHHHhCCcceEeecccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhh
Q 014083           73 NWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVG  152 (431)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~  152 (431)
                      .+.+..|...++.+++++|+|+||+||+++|++|.+.+|||||+.+||+|+|.|+++|+. ||+||||+|+|||||++|.
T Consensus       224 ~~~~~~r~~~~~~v~~~~L~e~yl~PF~~ai~~g~~~~VM~sYn~vnG~Pa~~s~~lL~~-LR~ewGF~G~VvSD~~a~~  302 (779)
T PLN03080        224 KWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQK-ARDEWGFQGYITSDCDAVA  302 (779)
T ss_pred             ccCCccccCccCccCHHHHHhhhhHHHHHHHHhcCCeEEEeCCcCcCCccccCCHHHHHH-HHHHhCcCCeEecchHHHH
Confidence            766778888888999999999999999999999878899999999999999999999986 9999999999999999999


Q ss_pred             hhhccccccCChHHHHHHHHHcCCCccCchhhHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 014083          153 VLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLG  232 (431)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~al~AG~D~~~~~~~~~~l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~~~~~~~~~  232 (431)
                      .+...+++..+.++++++|++||+||+|..++.+.+.+||++|++++++||+||+|||++|+++|+|+..|...++....
T Consensus       303 ~~~~~~~~~~~~~ea~~~Al~AG~Dl~~~~~~~~~l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~  382 (779)
T PLN03080        303 TIFEYQTYTKSPEDAVADVLKAGMDINCGSYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLG  382 (779)
T ss_pred             HhhhcccccCCHHHHHHHHHHcCCCcccCchhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCccccccccc
Confidence            99887777778899999999999999998877889999999999999999999999999999999999333323343444


Q ss_pred             CCcCCCHHHHHHHHHHhhcceEEeecCCCCCCCcCCCCCeEEEECCCCCcccccccccccCCCCCCCHHHHHHHhh-ccc
Q 014083          233 PRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYA-KTI  311 (431)
Q Consensus       233 ~~~v~~~~~~~la~e~a~esivLLKN~~~~LPL~~~~~~kiavig~~a~~~~~~~G~~~~~~~~~~t~~~~l~~~~-~~~  311 (431)
                      ...+++++|+++|+|+|++|||||||++++|||++.+.++|+||||.++....++|+|++.++...+++++|+++. .+.
T Consensus       383 ~~~v~~~~h~~lA~eaA~~siVLLKN~~~~LPL~~~~~~~IaViGp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~  462 (779)
T PLN03080        383 PNNVCTKEHRELALEAARQGIVLLKNDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTS  462 (779)
T ss_pred             ccccCCHHHHHHHHHHHHhCEEEEecCCCCCCCCCCCCCEEEEECCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcce
Confidence            5678899999999999999999999999999998655579999999999988888888888888899999999875 466


Q ss_pred             eeccCCccccCCcccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeCCcee
Q 014083          312 HQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPV  391 (431)
Q Consensus       312 ~~~g~~~~~~~~~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~g~P~  391 (431)
                      |..|+....+.++..+.+++++|+++|+|||++|.+...++||.||.++.||..|.+||++|++.+++|||||+++|+|+
T Consensus       463 y~~g~~~~~~~~~~~~~~A~~~A~~aD~vIv~~G~~~~~e~E~~Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv  542 (779)
T PLN03080        463 FAAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPV  542 (779)
T ss_pred             eccCccccccCchhhHHHHHHHhccCCEEEEEeCCCccccccCCCcccccCCccHHHHHHHHHhhcCCCEEEEEeCCcee
Confidence            88887544333455688899999999999999999888899999999999999999999999976667899999999999


Q ss_pred             eecCcCCCCCccEEEEccCcchhhHHHHHHHhhcCCCCC
Q 014083          392 DVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPG  430 (431)
Q Consensus       392 ~l~~~~~~~~v~ail~~~~~g~~~g~A~advL~G~~nPs  430 (431)
                      +++|+.+.++|+|||++|||||++|+|+||||||++|||
T Consensus       543 ~l~~~~~~~~v~AIl~~~ypGqegG~AiAdvLfG~vnPs  581 (779)
T PLN03080        543 DVSFAKQDPRIASILWIGYPGEVGGQALAEIIFGDYNPG  581 (779)
T ss_pred             eccchhccCCCCeEEEccCCcccchhhhHHHHcCCCCCC
Confidence            999987667899999999999999999999999999998

>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information
>PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 Back     alignment and domain information
>COG0486 ThdF Predicted GTPase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
3rrx_A 822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 4e-25
3usz_A 822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 5e-25
4i3g_A 829 Crystal Structure Of Desr, A Beta-glucosidase From 5e-24
4i3g_A 829 Crystal Structure Of Desr, A Beta-glucosidase From 2e-06
3zyz_A 713 Crystal Structure Of A Glycoside Hydrolase Family 3 1e-21
4i8d_A 714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 1e-21
2x40_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 5e-21
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 2e-20
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 1e-09
2x42_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 5e-20
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 2e-17
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 3e-09
1lq2_A602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 5e-14
1ex1_A605 Beta-D-Glucan Exohydrolase From Barley Length = 605 5e-14
3tev_A351 The Crystal Structure Of Glycosyl Hydrolase From De 4e-04
3bmx_A642 Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis 4e-04
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure 
Iteration: 1

 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 185/437 (42%), Gaps = 52/437 (11%)
Query: 12  WS--PNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRL----KVAACCKH 65
           WS  P V + RD RWGR  E+  EDP L  +YA   V G+QG+ G+         A  KH
Sbjct: 157 WSFAPTVAVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKH 216
Query: 66  YTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCA 125
           +   D     GVDR   N  + ++ L D ++  + + + +G V SVM S+N  NGK    
Sbjct: 217 FVG-DGGTERGVDR--GNTLIDEKGLRDIHSAGYFSAINQG-VQSVMASFNSWNGKRVHG 272
Query: 126 DPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPE-EAAADAIKAGLDLDCGP-- 182
           D  +L + +  Q   DG++VSD       +N   +    + E  A AI AG+D+   P  
Sbjct: 273 DKHLLTDVLKNQLGFDGFVVSD-------WNAHKFVEGCDLEQCAQAINAGVDVIMVPEH 325
Query: 183 FLAIH--TEGAVRGGLLREEDVNLALAYTITVQMRLGMF-DGEPSAQPFGNLGPRDVCTP 239
           F A +  T   V+ G++ E  +N A+   +  ++R G+F   +PSA+P     P+ +   
Sbjct: 326 FEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFTKSKPSARPESQ-HPQWLGAA 384
Query: 240 XXXXXXXXXXXXGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTT 299
                        +VLLKN+   LP+       VA  G N+      I   AG   G++ 
Sbjct: 385 EHRTLAREAVRKSLVLLKNNESILPIKASSRILVAGKGANA------INMQAG---GWSV 435
Query: 300 PLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQA-------DATVLVMGLDQSIEA 352
             QG          A                ++   ++       D  ++V+G  +   A
Sbjct: 436 SWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLSESGEYTSKPDVAIVVIG--EEPYA 493
Query: 353 EFIDRAGLLLPGRQQELVSRVA-----KASRGPVVLVLMCGGPVDVSFAKNDPRIGAILW 407
           E+     LL    Q E    +A     KA   PVV V + G P+ V+   N        W
Sbjct: 494 EWFGDIELL--EFQHETKHALALLKQLKADNIPVVTVFLSGRPLWVNKELNASDAFVAAW 551
Query: 408 VGYPGQAGGAAIADVLF 424
           +  PG + G  +ADVL 
Sbjct: 552 L--PG-SEGEGVADVLL 565
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure
>pdb|3TEV|A Chain A, The Crystal Structure Of Glycosyl Hydrolase From Deinococcus Radiodurans R1 Length = 351 Back     alignment and structure
>pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 1e-108
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 1e-102
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 9e-99
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 9e-73
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 5e-27
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 6e-31
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 1e-17
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 2e-11
4g6c_A342 Beta-hexosaminidase 1; ssgcid, niaid, structural g 6e-09
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 3e-07
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
 Score =  333 bits (856), Expect = e-108
 Identities = 108/464 (23%), Positives = 177/464 (38%), Gaps = 84/464 (18%)

Query: 12  WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDL 71
            +P +NI R+P  GR  E   EDPVL+G+ A+S+V+G+Q        V AC KH+ A + 
Sbjct: 116 LAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-----GVGACIKHFVANNQ 170

Query: 72  DNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILK 131
           +      R   +  VS++ L + Y   F+  V + K  SVM +YN++NGK    +  +LK
Sbjct: 171 ETN----RMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLK 226

Query: 132 NTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCG---------- 181
             +  +W  +G+++SD  +               +   + +KAG DL             
Sbjct: 227 KVLREEWGFEGFVMSDWYAG--------------DNPVEQLKAGNDLIMPGKAYQVNTER 272

Query: 182 PFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAH 241
                    A++ G L EE ++  +   + V +    F     +               H
Sbjct: 273 RDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYRYSNKPD--------LEKH 324

Query: 242 QQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYT-TP 300
            ++A +A  +G+VLL+N    LPLS      +A+ G     T+            Y  + 
Sbjct: 325 AKVAYEAGAEGVVLLRNE-EALPLSENS--KIALFGTGQIETIKGGTGSGDTHPRYAISI 381

Query: 301 LQGISRYAKTIHQAGCFGVACNGN---------------------------QLIGAAEVA 333
           L+GI        +                                               
Sbjct: 382 LEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKL 441

Query: 334 ARQADATVLVMGLDQSIEAEFIDRAG----LLLPGRQQELVSRVAKASRG---PVVLVLM 386
           A++ D  V+V+        E  DR        L   + +L+  V++        V+++L 
Sbjct: 442 AKKNDVAVIVISRISG---EGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLN 498

Query: 387 CGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPG 430
            G PV+V   ++      IL V   GQ  G  +ADVL GR NP 
Sbjct: 499 IGSPVEVVSWRDLV--DGILLVWQAGQETGRIVADVLTGRINPS 540
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query431
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 100.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 100.0
3zyz_A 713 Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 100.0
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 100.0
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 100.0
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 100.0
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 100.0
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 100.0
4g6c_A348 Beta-hexosaminidase 1; ssgcid, niaid, structural g 100.0
4gvf_A349 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N 100.0
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 100.0
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-90  Score=751.50  Aligned_cols=391  Identities=30%  Similarity=0.440  Sum_probs=339.9

Q ss_pred             ccccee-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCCCCCCCCCcccccc
Q 014083            6 MAGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNA   84 (431)
Q Consensus         6 ~~G~~~-~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~~~~~~~~~~~~~   84 (431)
                      ..|+|+ |||++||.|||+|||++|||||||+++++|+.|||+|||+.     ||++|+|||||||++.    .|...++
T Consensus        92 a~Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-----gV~a~~KHFpg~g~e~----~r~~~~~  162 (845)
T 3abz_A           92 AKNAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-----GIAATVKHFVCNDLED----QRFSSNS  162 (845)
T ss_dssp             HTTCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCBCEEEEETTCCCCT----TTTTCEE
T ss_pred             HcCCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-----CeeEEeeccccCCccc----CCccccC
Confidence            349999 99999999999999999999999999999999999999999     8999999999999643    4666778


Q ss_pred             ccCHHHHHhhhcHHHHHHHHhCCcceEeecccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhccccccCCh
Q 014083           85 RVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTP  164 (431)
Q Consensus        85 ~~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~~~~~~~~  164 (431)
                      .+++++|+|+||+||+++|+++++.+|||||+.+||+|||+|+++|+++||+||||+|+|||||++|.            
T Consensus       163 ~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------------  230 (845)
T 3abz_A          163 IVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY------------  230 (845)
T ss_dssp             ECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC------------
T ss_pred             CCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH------------
Confidence            89999999999999999997444999999999999999999999999999999999999999998763            


Q ss_pred             HHHHHHHHHcCCCccCch---hhH-HHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhc----CCCCCCCCCCCCCCCCCc
Q 014083          165 EEAAADAIKAGLDLDCGP---FLA-IHTEGAVRGGL-LREEDVNLALAYTITVQMRLG----MFDGEPSAQPFGNLGPRD  235 (431)
Q Consensus       165 ~~~~~~al~AG~D~~~~~---~~~-~~l~~av~~g~-~~~~~l~~av~ril~~k~~~g----l~~~~p~~~~~~~~~~~~  235 (431)
                        ++++|++||+||+|..   +.. +.+.++|++|+ +++++||+||+|||++|+++|    +|+ +|+..+    ....
T Consensus       231 --~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~-~p~~~~----~~~~  303 (845)
T 3abz_A          231 --TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTG-IVENGP----ESTS  303 (845)
T ss_dssp             --CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHC-CCTTCC----CCCT
T ss_pred             --HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCcccccc-CCccCc----cccc
Confidence              2478999999999962   222 48999999999 999999999999999999999    998 665321    1224


Q ss_pred             CCCHHHHHHHHHHhhcceEEeecCCCCCCCcCCCCCeEEEECCCCCccccccccccc-CCCCCCCHHHHHHHhhc--cce
Q 014083          236 VCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAG-VACGYTTPLQGISRYAK--TIH  312 (431)
Q Consensus       236 v~~~~~~~la~e~a~esivLLKN~~~~LPL~~~~~~kiavig~~a~~~~~~~G~~~~-~~~~~~t~~~~l~~~~~--~~~  312 (431)
                      +++++|+++++++|++|||||||++++|||++  .+||+||||+++....++|++.. .+.+.++++++|++.+.  +.|
T Consensus       304 ~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y  381 (845)
T 3abz_A          304 NNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDY  381 (845)
T ss_dssp             TCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEE
T ss_pred             cCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCcccCCcCCHHHHHHHhhcCceee
Confidence            78999999999999999999999999999975  37999999999988766655543 56678999999988642  334


Q ss_pred             eccCCcc------------------------------------c------------------------------------
Q 014083          313 QAGCFGV------------------------------------A------------------------------------  320 (431)
Q Consensus       313 ~~g~~~~------------------------------------~------------------------------------  320 (431)
                      ..||...                                    .                                    
T Consensus       382 ~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (845)
T 3abz_A          382 TVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFV  461 (845)
T ss_dssp             ECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEE
T ss_pred             ccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccceeecccccccccccccceeE
Confidence            4332100                                    0                                    


Q ss_pred             -----------------------------------------------------------------------c--------
Q 014083          321 -----------------------------------------------------------------------C--------  321 (431)
Q Consensus       321 -----------------------------------------------------------------------~--------  321 (431)
                                                                                             .        
T Consensus       462 ~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~  541 (845)
T 3abz_A          462 TLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGL  541 (845)
T ss_dssp             EEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCC
T ss_pred             EEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEeccCCcccc
Confidence                                                                                   0        


Q ss_pred             ----------------CC-cccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEE
Q 014083          322 ----------------NG-NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLV  384 (431)
Q Consensus       322 ----------------~~-~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV  384 (431)
                                      .+ ...+++++++|+++|++|||+|.++..++||.||++|.||+.|.+||++|++. ++|||||
T Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVV  620 (845)
T 3abz_A          542 VGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIV  620 (845)
T ss_dssp             SSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEE
T ss_pred             cccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHh-CCCEEEE
Confidence                            00 12356788999999999999999999999999999999999999999999985 5799999


Q ss_pred             EeCCceeeecCcCCCCCccEEEEccCcchhhHHHHHHHhhcCCCCC
Q 014083          385 LMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPG  430 (431)
Q Consensus       385 ~~~g~P~~l~~~~~~~~v~ail~~~~~g~~~g~A~advL~G~~nPs  430 (431)
                      +++|+|++|+|++   +++|||++|||||++|+|+||||||++|||
T Consensus       621 l~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPS  663 (845)
T 3abz_A          621 NQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPN  663 (845)
T ss_dssp             EECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCC
T ss_pred             EeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCC
Confidence            9999999999983   799999999999999999999999999998
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Back     alignment and structure
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* Back     alignment and structure
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* Back     alignment and structure
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 431
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 6e-32
d1x38a2214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 3e-13
d1tr9a_330 c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol 1e-11
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  123 bits (308), Expect = 6e-32
 Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 28/257 (10%)

Query: 11  YWSPNVNIFRDPRWGRGQETPGEDPVLTGKY-----------AASYVRGLQGNTGSRLKV 59
            ++P + + RDPRWGR  E+  ED  +                  +  G+    G   KV
Sbjct: 143 AFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKN-KV 201

Query: 60  AACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVN 119
           AAC KH+      +   VD  + N  +  ++     ++P     ++  V++VM SY+  N
Sbjct: 202 AACAKHFVG----DGGTVDGINENNTIINREGLMNIHMPAYKNAMDKGVSTVMISYSSWN 257

Query: 120 GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDL- 178
           G    A+ D++   +    +  G+++SD + +     T         +   +I AGLD+ 
Sbjct: 258 GVKMHANQDLVTGYLKDTLKFKGFVISDWEGID--RITTPAGSDYSYSVKASILAGLDMI 315

Query: 179 ---DCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLG-PR 234
              +          G V GG++    ++ A+   + V+  +G+F+      P+ +     
Sbjct: 316 MVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-----NPYADPAMAE 370

Query: 235 DVCTPAHQQLALQAAHQ 251
            +    H+ LA +AA +
Sbjct: 371 QLGKQEHRDLAREAARK 387
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query431
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 100.0
d1x38a2214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 99.92
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=4.1e-56  Score=445.39  Aligned_cols=236  Identities=26%  Similarity=0.467  Sum_probs=205.4

Q ss_pred             ccccee-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCCC-----------CCCeeEEeeccccccCCCC
Q 014083            6 MAGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTG-----------SRLKVAACCKHYTAYDLDN   73 (431)
Q Consensus         6 ~~G~~~-~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~-----------g~~gv~a~~KHfpg~g~~~   73 (431)
                      ..|||+ |||++||.|||+|||++|+|||||+++++|+. +|.++|+...           +..||++|+|||||||...
T Consensus       137 a~Gin~~~aPv~Dv~~~p~~gr~~et~geDp~l~~~~~~-~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~  215 (388)
T d1x38a1         137 ATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTV  215 (388)
T ss_dssp             HTTCCEECCCBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCG
T ss_pred             hcCCccccCCcccccccccccccccCccCCHHHHHHHHh-hhhhhhchhhhhhcccccccccccCcceeeeeeecCCccc
Confidence            459999 99999999999999999999999999999965 7888887541           2348999999999998543


Q ss_pred             CCCCCccccccccCHHHHHhhhcHHHHHHHHhCCcceEeecccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhh
Q 014083           74 WNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGV  153 (431)
Q Consensus        74 ~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~  153 (431)
                         .++......++.++|++.||+||+.+|++| +.+|||+|+.+||+|+|.|+++|+++||++|||+|+|||||++|++
T Consensus       216 ---~~~~~~~~~i~~~~l~~~~l~pf~~~i~~g-~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~  291 (388)
T d1x38a1         216 ---DGINENNTIINREGLMNIHMPAYKNAMDKG-VSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDR  291 (388)
T ss_dssp             ---GGCTTCEECCCHHHHHHHTSHHHHHHHHTT-CCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGG
T ss_pred             ---cCccccccchhHHHHHHHhhhhhHHHHhhc-cccccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhccc
Confidence               123334556799999999999999999987 8999999999999999999999999999999999999999999999


Q ss_pred             hhccccccCChHHHHHHHHHcCCCccCch----hhHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 014083          154 LYNTQHYTRTPEEAAADAIKAGLDLDCGP----FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFG  229 (431)
Q Consensus       154 ~~~~~~~~~~~~~~~~~al~AG~D~~~~~----~~~~~l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~~~~~~  229 (431)
                      +...  +.....++++.++.||+||+|.+    .+.+.+.+||++|+|+++|||+||+|||++|+++|||| +|+..+..
T Consensus       292 ~~~~--~~~~~~~~~~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd-~p~~~~~~  368 (388)
T d1x38a1         292 ITTP--AGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADPAM  368 (388)
T ss_dssp             GSSS--TTTTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCGGG
T ss_pred             cccc--cCCcHHHHHHHHHhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCChhh
Confidence            8753  33466788999999999998853    35678899999999999999999999999999999999 88854421


Q ss_pred             CCCCCcCCCHHHHHHHHHHhhcc
Q 014083          230 NLGPRDVCTPAHQQLALQAAHQG  252 (431)
Q Consensus       230 ~~~~~~v~~~~~~~la~e~a~es  252 (431)
                         ...+++++|+++|+++|+||
T Consensus       369 ---~~~i~~~~h~~~a~~aA~~S  388 (388)
T d1x38a1         369 ---AEQLGKQEHRDLAREAARKS  388 (388)
T ss_dssp             ---GGGTTCHHHHHHHHHHHHHH
T ss_pred             ---hhhcCCHHHHHHHHHHHhcC
Confidence               24688999999999999997
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure