Citrus Sinensis ID: 014128

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430
MVFLFFSLLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE
ccEEEEEccccccccccccccccccHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccEEEEEEccccccccEEEEEEccccEEEEEcccccccccEEEEEEEcEEEEEEEcccccEEEEEcccEEEEEEEEccEEEEccccEEEEEcccccEEEEEEEEcccccccccEEEEEEEcccccEEEEEEEEEccEEEEEEcccccccccccccEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccEEcEEEEcccccccccccccEEEEcccHHHHHcccccccccccccccccccccccccccccc
cEEEEEEEccccccEEEcccccccccccccccccccccccccHHHHHHHHccHcccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEccccccEEEEEEccccccEEEEEEcccccEEEEEEEEcccccccEEEEEEEEEEEEEEcccccEEEEccccEEEEEEEEccEEEccccEEEEEEcccccEEEEEEEEcccccccccEEEEEEEEccccEEEEEEEcccccEEEEccccccccccccccEEEEEccccccccccccHHHHHHHHcccccccccccccccccHcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccccEEEEcccEHHHHccccccccccccccEEEccccccccccccc
MVFLFFSLLgyeglevvnpegstedaedEARRGRWKQEERDNYWKMMQKYIGAdvqslvtlpvfisepnSVLQRMAELMEYSHLldladecedpyMRLVYASSWALSIYFAYRRawkpfnpvlgeTFEMVNHGGVTFIaeqvshhppmsaghaenehfIYDVTSKLRTKFlgnsidvypvgrtrvtlkrdgvvldlvppptkvhnlifgrtwidspgdmvmtnlttgdkvvlyfqpcgwfgagryevdgyvydaaeqpkilmtgkwnesmsyqpcdsegeplpgtelkevwrvadapeddkyqYTYFThklnsfdtapkkllpsdsrlrpdryalekgdlskagsekSRLEERQRAEKRIREakddmftpkwfdlsdevtptpwgdlevyryngkyselratldnseslgeinpettefnpwqyedsaae
MVFLFFSLLgyeglevvnpegstedaedearrgrwkqeerdNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLgnsidvypvgrtrvtlkrdgvvldlvppptkvhnlifgrtwidspGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFthklnsfdtapkkllpsdsrlrpdryalekgdlskagseksrleerQRAEKRireakddmftpkwfdlsdevtptpwgdLEVYRYNGKYSELRAtldnseslgeinpettefnpwqyedsaae
MVFLFFSLLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE
*VFLFFSLLGYEGLEVV***********************DNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSH********AENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWN*******************LKEVWRVADAPEDDKYQYTYFTHKLNSF*****************************************************FTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELR******************************
****F**************************************WKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPC***********LKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEE*****************PKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEF***********
MVFLFFSLLGYEGLEVVN*******************EERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM*********EPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKG********************RIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE
MVFLFFSLLGYEGLEVVNPE************GRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYE*****
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MVFLFFSLLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSxxxxxxxxxxxxxxxxxxxxxMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query430 2.2.26 [Sep-21-2011]
Q9SR33458 Oxysterol-binding protein yes no 0.969 0.910 0.792 0.0
Q9LZM1453 Oxysterol-binding protein no no 0.976 0.927 0.789 0.0
Q93Y40457 Oxysterol-binding protein no no 0.979 0.921 0.767 0.0
Q54QP6402 Oxysterol-binding protein yes no 0.862 0.922 0.370 6e-61
Q9BXW6950 Oxysterol-binding protein yes no 0.804 0.364 0.335 3e-56
Q8K4M9950 Oxysterol-binding protein yes no 0.809 0.366 0.342 3e-56
Q54ID7571 Oxysterol-binding protein no no 0.816 0.614 0.331 6e-56
Q9H4L5887 Oxysterol-binding protein no no 0.793 0.384 0.356 7e-56
Q91XL9950 Oxysterol-binding protein no no 0.809 0.366 0.340 1e-55
Q9BZF3934 Oxysterol-binding protein no no 0.748 0.344 0.371 6e-54
>sp|Q9SR33|ORP3B_ARATH Oxysterol-binding protein-related protein 3B OS=Arabidopsis thaliana GN=ORP3B PE=2 SV=1 Back     alignment and function desciption
 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/419 (79%), Positives = 382/419 (91%), Gaps = 2/419 (0%)

Query: 8   LLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISE 67
           L+ YEGLEV+NPEGST+DAE+EA RGRWKQE+RD YWKMMQKYIG+DV S+VTLPV I E
Sbjct: 39  LVPYEGLEVINPEGSTDDAEEEASRGRWKQEDRDGYWKMMQKYIGSDVTSMVTLPVIIFE 98

Query: 68  PNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETF 127
           P ++LQ+MAELMEYSHLLD+AD+ EDPY+R+VYASSWA+S+Y+A++R WKPFNP+LGET+
Sbjct: 99  PMTMLQKMAELMEYSHLLDMADKTEDPYLRMVYASSWAISVYYAFQRTWKPFNPILGETY 158

Query: 128 EMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTL 187
           EM N+ GV FI+EQVSHHPPMSAGHAENEHF YD TSKL+TKFLGNSIDVYPVGRTRVTL
Sbjct: 159 EMANYNGVNFISEQVSHHPPMSAGHAENEHFTYDCTSKLKTKFLGNSIDVYPVGRTRVTL 218

Query: 188 KRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEV 247
           KRDGVVLDLVPP TKVHNLIFGRTW+DSPG+M+MTN TTGDKVVLYFQPCGWFG+GRYEV
Sbjct: 219 KRDGVVLDLVPPLTKVHNLIFGRTWVDSPGEMIMTNQTTGDKVVLYFQPCGWFGSGRYEV 278

Query: 248 DGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYF 307
           DGYVY+A+E+PKILMTGKWNESMSYQPCD EGEPLPGTELKEVW++AD P+DDKYQYT+F
Sbjct: 279 DGYVYNASEEPKILMTGKWNESMSYQPCDGEGEPLPGTELKEVWKLADVPKDDKYQYTHF 338

Query: 308 THKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDM 367
            HK+NSFDTAPKKLLPSDSRLRPDRYALE GD+SK+G EKS +EERQRAEKR RE K   
Sbjct: 339 AHKINSFDTAPKKLLPSDSRLRPDRYALEMGDMSKSGYEKSSMEERQRAEKRTREEKGQA 398

Query: 368 FTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYED 426
           FTPKWFD+++EVT TPWGDLEVY++NGKYSE RA  DNSE     +P++ +FNPWQ++D
Sbjct: 399 FTPKWFDVTEEVTATPWGDLEVYQFNGKYSEHRAAADNSED--NTDPKSIQFNPWQFQD 455
May be involved in the transport of sterols.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9LZM1|ORP3A_ARATH Oxysterol-binding protein-related protein 3A OS=Arabidopsis thaliana GN=ORP3A PE=1 SV=1 Back     alignment and function description
>sp|Q93Y40|ORP3C_ARATH Oxysterol-binding protein-related protein 3C OS=Arabidopsis thaliana GN=ORP3C PE=2 SV=1 Back     alignment and function description
>sp|Q54QP6|OSB8_DICDI Oxysterol-binding protein 8 OS=Dictyostelium discoideum GN=osbH PE=1 SV=1 Back     alignment and function description
>sp|Q9BXW6|OSBL1_HUMAN Oxysterol-binding protein-related protein 1 OS=Homo sapiens GN=OSBPL1A PE=1 SV=2 Back     alignment and function description
>sp|Q8K4M9|OSBL1_RAT Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus GN=Osbpl1a PE=1 SV=1 Back     alignment and function description
>sp|Q54ID7|OSB11_DICDI Oxysterol-binding protein 11 OS=Dictyostelium discoideum GN=osbK PE=3 SV=1 Back     alignment and function description
>sp|Q9H4L5|OSBL3_HUMAN Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1 Back     alignment and function description
>sp|Q91XL9|OSBL1_MOUSE Oxysterol-binding protein-related protein 1 OS=Mus musculus GN=Osbpl1a PE=1 SV=2 Back     alignment and function description
>sp|Q9BZF3|OSBL6_HUMAN Oxysterol-binding protein-related protein 6 OS=Homo sapiens GN=OSBPL6 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query430
356558019456 PREDICTED: oxysterol-binding protein-rel 0.983 0.927 0.801 0.0
255583115456 oxysterol binding protein, putative [Ric 0.983 0.927 0.794 0.0
225434911456 PREDICTED: oxysterol-binding protein-rel 0.983 0.927 0.796 0.0
359482105499 PREDICTED: oxysterol-binding protein-rel 0.967 0.833 0.790 0.0
297740362446 unnamed protein product [Vitis vinifera] 0.967 0.932 0.790 0.0
356542429450 PREDICTED: oxysterol-binding protein-rel 0.969 0.926 0.793 0.0
297829460456 oxysterol-binding family protein [Arabid 0.969 0.914 0.797 0.0
15232633458 OSBP(oxysterol binding protein)-related 0.969 0.910 0.792 0.0
297806135453 hypothetical protein ARALYDRAFT_324883 [ 0.976 0.927 0.791 0.0
15241681453 Oxysterol-binding family protein [Arabid 0.976 0.927 0.789 0.0
>gi|356558019|ref|XP_003547306.1| PREDICTED: oxysterol-binding protein-related protein 3C-like [Glycine max] Back     alignment and taxonomy information
 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/423 (80%), Positives = 389/423 (91%)

Query: 8   LLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISE 67
           LLGYEG+EV+NP+G  EDAE+EA+RGRWK EERD YWKMM KYIG+DV S+VTLPV I E
Sbjct: 34  LLGYEGVEVINPDGGKEDAEEEAQRGRWKPEERDGYWKMMHKYIGSDVTSMVTLPVIIFE 93

Query: 68  PNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETF 127
           P ++LQ+MAELMEYS+LLD ADECEDPYMRLVYASSWA+S+YFAY+R WKPFNP+LGET+
Sbjct: 94  PMTMLQKMAELMEYSYLLDQADECEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETY 153

Query: 128 EMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTL 187
           EM NHGG+TF+AEQVSHHPPMSAGHAENEHF YDVTSKL+TKFLGNS+DVYPVGRTRVTL
Sbjct: 154 EMANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTL 213

Query: 188 KRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEV 247
           KRDGVV+DLVPPPTKV+NLIFGRTWIDSPG+M+MTNLTTGDKVVLYFQPCGWFGAGRYEV
Sbjct: 214 KRDGVVIDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEV 273

Query: 248 DGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYF 307
           DGYVY++AE+PKILMTGKWNESMSYQPCDSEGEPLPGTELKEVW VAD P++DK+QYTYF
Sbjct: 274 DGYVYNSAEEPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWHVADVPKNDKFQYTYF 333

Query: 308 THKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDM 367
            HK+NSFDTAPKKLL SDSRLRPDRYALE GDLSK+G+EKS LE++QR EK+IREAK+  
Sbjct: 334 AHKINSFDTAPKKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEDKQRTEKKIREAKEHK 393

Query: 368 FTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDS 427
           FTP+WFDL++EVT TPWGDLE+Y+YNGKY+E RA +DNS S+  ++ +  EFNPWQY + 
Sbjct: 394 FTPRWFDLTEEVTSTPWGDLEIYQYNGKYTEHRAAIDNSGSIDHVDNKEIEFNPWQYGNL 453

Query: 428 AAE 430
           + E
Sbjct: 454 STE 456

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255583115|ref|XP_002532324.1| oxysterol binding protein, putative [Ricinus communis] gi|223527967|gb|EEF30051.1| oxysterol binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225434911|ref|XP_002283434.1| PREDICTED: oxysterol-binding protein-related protein 3C [Vitis vinifera] gi|297746058|emb|CBI16114.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359482105|ref|XP_002267148.2| PREDICTED: oxysterol-binding protein-related protein 3A [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740362|emb|CBI30544.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356542429|ref|XP_003539669.1| PREDICTED: oxysterol-binding protein-related protein 3C-like [Glycine max] Back     alignment and taxonomy information
>gi|297829460|ref|XP_002882612.1| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata] gi|297328452|gb|EFH58871.1| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15232633|ref|NP_187541.1| OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana] gi|75266215|sp|Q9SR33.1|ORP3B_ARATH RecName: Full=Oxysterol-binding protein-related protein 3B; AltName: Full=OSBP-related protein 3B gi|6478922|gb|AAF14027.1|AC011436_11 putative oxysterol-binding protein [Arabidopsis thaliana] gi|17065254|gb|AAL32781.1| putative oxysterol-binding protein [Arabidopsis thaliana] gi|20260050|gb|AAM13372.1| putative oxysterol-binding protein [Arabidopsis thaliana] gi|332641227|gb|AEE74748.1| OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297806135|ref|XP_002870951.1| hypothetical protein ARALYDRAFT_324883 [Arabidopsis lyrata subsp. lyrata] gi|297316788|gb|EFH47210.1| hypothetical protein ARALYDRAFT_324883 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15241681|ref|NP_195830.1| Oxysterol-binding family protein [Arabidopsis thaliana] gi|75264475|sp|Q9LZM1.1|ORP3A_ARATH RecName: Full=Oxysterol-binding protein-related protein 3A; AltName: Full=OSBP-related protein 3A; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 18 gi|7340684|emb|CAB82983.1| putative protein [Arabidopsis thaliana] gi|15292811|gb|AAK92774.1| unknown protein [Arabidopsis thaliana] gi|20258867|gb|AAM14105.1| putative oxysterol-binding protein [Arabidopsis thaliana] gi|332003048|gb|AED90431.1| Oxysterol-binding family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query430
TAIR|locus:2083594458 ORP3B "OSBP(oxysterol binding 0.969 0.910 0.792 4.4e-194
TAIR|locus:2185163453 UNE18 "UNFERTILIZED EMBRYO SAC 0.976 0.927 0.789 9.2e-194
TAIR|locus:2148368457 ORP3C "OSBP(oxysterol binding 0.979 0.921 0.770 4.6e-192
UNIPROTKB|F1SBB0743 OSBPL1A "Oxysterol-binding pro 0.534 0.309 0.390 1.2e-59
DICTYBASE|DDB_G0283709402 osbH "oxysterol binding family 0.893 0.955 0.372 2.7e-59
UNIPROTKB|Q9BXW6950 OSBPL1A "Oxysterol-binding pro 0.534 0.242 0.394 1.5e-58
UNIPROTKB|E2RMD4950 OSBPL1A "Oxysterol-binding pro 0.534 0.242 0.394 2e-58
ZFIN|ZDB-GENE-091116-46467 osbpl2a "oxysterol binding pro 0.569 0.524 0.368 2.9e-58
UNIPROTKB|E1BLV1952 OSBPL1A "Oxysterol-binding pro 0.534 0.241 0.394 4.1e-58
MGI|MGI:1927551950 Osbpl1a "oxysterol binding pro 0.534 0.242 0.394 6.5e-58
TAIR|locus:2083594 ORP3B "OSBP(oxysterol binding protein)-related protein 3B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1880 (666.9 bits), Expect = 4.4e-194, P = 4.4e-194
 Identities = 332/419 (79%), Positives = 382/419 (91%)

Query:     8 LLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISE 67
             L+ YEGLEV+NPEGST+DAE+EA RGRWKQE+RD YWKMMQKYIG+DV S+VTLPV I E
Sbjct:    39 LVPYEGLEVINPEGSTDDAEEEASRGRWKQEDRDGYWKMMQKYIGSDVTSMVTLPVIIFE 98

Query:    68 PNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETF 127
             P ++LQ+MAELMEYSHLLD+AD+ EDPY+R+VYASSWA+S+Y+A++R WKPFNP+LGET+
Sbjct:    99 PMTMLQKMAELMEYSHLLDMADKTEDPYLRMVYASSWAISVYYAFQRTWKPFNPILGETY 158

Query:   128 EMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTL 187
             EM N+ GV FI+EQVSHHPPMSAGHAENEHF YD TSKL+TKFLGNSIDVYPVGRTRVTL
Sbjct:   159 EMANYNGVNFISEQVSHHPPMSAGHAENEHFTYDCTSKLKTKFLGNSIDVYPVGRTRVTL 218

Query:   188 KRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEV 247
             KRDGVVLDLVPP TKVHNLIFGRTW+DSPG+M+MTN TTGDKVVLYFQPCGWFG+GRYEV
Sbjct:   219 KRDGVVLDLVPPLTKVHNLIFGRTWVDSPGEMIMTNQTTGDKVVLYFQPCGWFGSGRYEV 278

Query:   248 DGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYF 307
             DGYVY+A+E+PKILMTGKWNESMSYQPCD EGEPLPGTELKEVW++AD P+DDKYQYT+F
Sbjct:   279 DGYVYNASEEPKILMTGKWNESMSYQPCDGEGEPLPGTELKEVWKLADVPKDDKYQYTHF 338

Query:   308 THKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDM 367
              HK+NSFDTAPKKLLPSDSRLRPDRYALE GD+SK+G EKS +EERQRAEKR RE K   
Sbjct:   339 AHKINSFDTAPKKLLPSDSRLRPDRYALEMGDMSKSGYEKSSMEERQRAEKRTREEKGQA 398

Query:   368 FTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYED 426
             FTPKWFD+++EVT TPWGDLEVY++NGKYSE RA  DNSE     +P++ +FNPWQ++D
Sbjct:   399 FTPKWFDVTEEVTATPWGDLEVYQFNGKYSEHRAAADNSED--NTDPKSIQFNPWQFQD 455
GO:0005634 "nucleus" evidence=ISM
GO:0008142 "oxysterol binding" evidence=ISS
GO:0008202 "steroid metabolic process" evidence=ISS
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2185163 UNE18 "UNFERTILIZED EMBRYO SAC 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148368 ORP3C "OSBP(oxysterol binding protein)-related protein 3C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1SBB0 OSBPL1A "Oxysterol-binding protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283709 osbH "oxysterol binding family protein, member 8" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BXW6 OSBPL1A "Oxysterol-binding protein-related protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RMD4 OSBPL1A "Oxysterol-binding protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-091116-46 osbpl2a "oxysterol binding protein-like 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BLV1 OSBPL1A "Oxysterol-binding protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1927551 Osbpl1a "oxysterol binding protein-like 1A" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q54QP6OSB8_DICDINo assigned EC number0.37000.86270.9228yesno
Q9SR33ORP3B_ARATHNo assigned EC number0.79230.96970.9104yesno
Q9LZM1ORP3A_ARATHNo assigned EC number0.78900.97670.9271nono
Q93Y40ORP3C_ARATHNo assigned EC number0.76770.97900.9212nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query430
pfam01237335 pfam01237, Oxysterol_BP, Oxysterol-binding protein 1e-141
>gnl|CDD|216381 pfam01237, Oxysterol_BP, Oxysterol-binding protein Back     alignment and domain information 
 Score =  405 bits (1043), Expect = e-141
 Identities = 145/343 (42%), Positives = 205/343 (59%), Gaps = 15/343 (4%)

Query: 62  PVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA--YRRAWKPF 119
           PVF +EP S+LQR+AE +EY  LLD A + +DP  R++Y +++A+S Y +   RR  KPF
Sbjct: 1   PVFFNEPLSLLQRLAEDLEYPDLLDKAAKEDDPLERMLYVAAFAVSTYSSTRKRRTKKPF 60

Query: 120 NPVLGETFEMVNH-GGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVY 178
           NP+LGETFE+V   GG  FI+EQVSHHPP+SA HAE++ +    +S  ++KF G SI+V 
Sbjct: 61  NPLLGETFELVREDGGFRFISEQVSHHPPISAYHAESKGWTLWGSSAPKSKFWGKSIEVK 120

Query: 179 PVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCG 238
           P G   +TLK+ G       P T +HN+IFG+ +++  G+M + N TTG K V+ F+  G
Sbjct: 121 PEGHAHLTLKKTGEHYTWTKPTTHIHNIIFGKPYVELYGEMYIKNSTTGYKAVIEFKKKG 180

Query: 239 WFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPE 298
           WF   + EV+G VYD   +    ++GKWNES+  +   S        E K +W+    P 
Sbjct: 181 WFSGRKNEVEGKVYDKKGKVLYTISGKWNESLYIKKVKSS-----TGEKKLLWKANPLPP 235

Query: 299 D--DKYQYTYFTHKLNSFDTAPK-KLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQR 355
           +    Y +T F   LN      K +L P+DSRLRPD+ ALE+GD  +A  EK RLEE+QR
Sbjct: 236 NSEKVYGFTKFAIPLNELTPELKEELPPTDSRLRPDQRALEEGDYDEAEEEKLRLEEKQR 295

Query: 356 AEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSE 398
             ++ RE K + + P+WF    +    P    E + Y G Y E
Sbjct: 296 ERRKEREEKGEEWKPRWFVKVKD----PLTGEEDWVYKGGYWE 334

Length = 335

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 430
KOG2209445 consensus Oxysterol-binding protein [Signal transd 100.0
PF01237354 Oxysterol_BP: Oxysterol-binding protein ; InterPro 100.0
KOG1737799 consensus Oxysterol-binding protein [Lipid transpo 100.0
KOG2210392 consensus Oxysterol-binding protein [Signal transd 100.0
>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-108  Score=787.05  Aligned_cols=362  Identities=36%  Similarity=0.665  Sum_probs=329.5

Q ss_pred             cccchHHHHHhhccCccccCCcccCcccccccchhHHhhccccchHhhhcccCCCCHHHHHHHHHHHHHhhhhh-ccccC
Q 014128           38 EERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA-YRRAW  116 (430)
Q Consensus        38 ~~~~slw~~lk~~iGkDLts~islPv~~~EP~S~Lqr~ae~~ey~~lL~~Aa~~~d~~eRm~~V~af~iS~~~~-~~r~~  116 (430)
                      -+.+|||++||++||+|| |+|+|||.||||+|||||++|+|+|..||.+||.+.||+|||.+|+|||+|+.++ -.|..
T Consensus        39 r~d~SIW~Ilr~ciGkel-SkiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~~~~p~eRmqyVAAFAvsavas~weR~g  117 (445)
T KOG2209|consen   39 RNDFSIWSILRKCIGKEL-SKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSQSDPVERMQYVAAFAVSAVASQWERTG  117 (445)
T ss_pred             cccccHHHHHHhhhchhh-hheeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhHHHhc
Confidence            356899999999999999 5799999999999999999999999999999999999999999999999999976 57999


Q ss_pred             CCCCCCCCCeEEEEecC-CeEEEEeecccCCCeeEEEEE--CCCeEEEEEeceeeeEEeeEEEEEEeeEEEEEEecCCeE
Q 014128          117 KPFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVV  193 (430)
Q Consensus       117 KPfNPiLGETfe~~~~~-g~~~iaEQVSHHPPIsA~~~e--~~~~~~~~~~~~~~kF~G~sv~v~~~G~~~i~~~~~ge~  193 (430)
                      ||||||||||||+.+.+ |+|||||||||||||||||+|  +..|.|.|++.|+.||||+||++.|.|+++|+|+++||.
T Consensus       118 KPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksvea~Pkgtitle~~k~nEa  197 (445)
T KOG2209|consen  118 KPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLKHNEA  197 (445)
T ss_pred             CCCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceeecCCCceEEEEecccCcc
Confidence            99999999999998854 999999999999999999999  788999999999999999999999999999999999999


Q ss_pred             EEEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEecCccccCcceEEEEEEECCCCCceEEEeeeecceeeee
Q 014128          194 LDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQ  273 (430)
Q Consensus       194 Y~~~~P~~~v~nii~G~~~~e~~G~~~I~~~~tg~~a~i~F~~~~~fg~~~~~v~G~V~d~~g~~~~~i~G~W~~~l~~~  273 (430)
                      |+|+.|+++|||||+|++|||++|+|.|.||.||++|+++|+++|+||+..|+|+|+|.|++.++++.|.|+|++.|+..
T Consensus       198 YtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~Fk~~G~~gk~lHkVEG~i~d~~k~kl~~lYGkWTe~l~~c  277 (445)
T KOG2209|consen  198 YTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNFKPCGLFGKELHKVEGHIQDKSKKKLCALYGKWTECLYSC  277 (445)
T ss_pred             eeccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEecccccccccchhheeehhhccccccchhhhccHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988753


Q ss_pred             eCCC---------------------------CCCCCCCCc-------eeEEEeeccCCCC--CccccceeeeecCCCCCC
Q 014128          274 PCDS---------------------------EGEPLPGTE-------LKEVWRVADAPED--DKYQYTYFTHKLNSFDTA  317 (430)
Q Consensus       274 ~~~~---------------------------~g~~~~~~~-------~~~lW~~~~~p~~--~~y~ft~fa~~LNe~~~~  317 (430)
                      +..+                           +..|+++++       .+.||.+++.|++  ++|+||.||++||++++.
T Consensus       278 d~esf~~~~Kq~~r~~~~r~~s~~~~~see~dd~P~~ds~~v~~iPgSk~LW~~n~rP~n~~~~y~FT~FalsLNem~~~  357 (445)
T KOG2209|consen  278 DPESFDAFKKQDKRNTEERKNSKQMSTSEELDDMPVPDSESVFIIPGSKLLWRINPRPPNSAQMYNFTSFALSLNEMDKG  357 (445)
T ss_pred             CHHHHHHHHHhhhhcchhhhhhccCCchhhccCCCCCCcceeEecCCCeEEEEecCCCCCHHHhhchhhheeehhhhccC
Confidence            2110                           001222211       2469999999998  699999999999999984


Q ss_pred             -CCcCCCCCCccchhHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCCCCCCCCCCcceEEeccch
Q 014128          318 -PKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKY  396 (430)
Q Consensus       318 -~~~~~ptDSR~RpD~rale~Gd~d~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~w~y~g~Y  396 (430)
                       ...++|||||+|||+|+||+|++|.|.++|+||||+||+.|+.|.+....|+||||.+..++.    .+...|.|.|+|
T Consensus       358 M~~tl~pTD~RlRpDi~~mE~G~~D~AseeK~rlEEkQRe~Rk~rs~~~~dw~~rWF~~~~np~----t~~~dWlYsGgY  433 (445)
T KOG2209|consen  358 MESTLPPTDCRLRPDIRAMENGNIDQASEEKKRLEEKQREARKNRSKSEEDWKTRWFHQGPNPY----TGAQDWLYSGGY  433 (445)
T ss_pred             cccccCCcccccCchhhhhhcCCcchhHHHHHHHHHHHHHHHhhcccccccCcchhcccCCCCC----CCcccceeecCc
Confidence             347789999999999999999999999999999999999999998889999999999998864    334679999999


Q ss_pred             hhhcccCCCCCC
Q 014128          397 SELRATLDNSES  408 (430)
Q Consensus       397 w~~r~~~~~~~~  408 (430)
                      |++    +++.|
T Consensus       434 wdR----~ysn~  441 (445)
T KOG2209|consen  434 WDR----NYSNC  441 (445)
T ss_pred             ccc----ccccC
Confidence            976    45544

>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related Back     alignment and domain information
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism] Back     alignment and domain information
>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query430
3spw_A436 Structure Of Osh4pKES1P IN COMPLEX WITH PHOSPHATIDY 4e-10
1zht_A438 Structure Of Yeast Oxysterol Binding Protein Osh4 I 4e-10
1zi7_A406 Structure Of Truncated Yeast Oxysterol Binding Prot 4e-07
>pdb|3SPW|A Chain A, Structure Of Osh4pKES1P IN COMPLEX WITH PHOSPHATIDYLINOSITOL 4- Phosphate Length = 436 Back     alignment and structure 
Iteration: 1

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 45/318 (14%)
Query: 90  ECEDPYM-RLVYASSWALSI----YFAYRRAW----KPFNPVLGETF-------EMVNHG 133
           E E P + R++  + W +S     Y +   +     KP NP LGE F       E    G
Sbjct: 75  EVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFG 134
Query: 134 GVTFIAEQVSHHPPMSAGHAENEHFIYDVT--SKLRTKFLGN-SIDVYPVGRTRVTLKRD 190
               ++EQVSHHPP++A    N+     +   ++++  F  +  + V   G T + +K +
Sbjct: 135 ETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDE 194
Query: 191 GVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGY 250
             +  + PPP  +  ++    +++  G   + + +TG   V+ F   G+F   +      
Sbjct: 195 SYL--VTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFSGKKNSFKAR 251
Query: 251 VY----DAAEQPKILMT--GKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQY 304
           +Y    D+ ++ K L T  G+W+ S      + + E       +  +  A  P +     
Sbjct: 252 IYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEES------RLFYDAARIPAEH---- 301
Query: 305 TYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAK 364
                 LN      +  L S         A++ GD +     K+ LEE QR  ++  EAK
Sbjct: 302 ------LNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAK 355
Query: 365 DDMFTPKWF-DLSDEVTP 381
              +  +WF D    VTP
Sbjct: 356 GISWQRRWFKDFDYSVTP 373
>pdb|1ZHT|A Chain A, Structure Of Yeast Oxysterol Binding Protein Osh4 In Complex With 7-Hydroxycholesterol Length = 438 Back     alignment and structure
>pdb|1ZI7|A Chain A, Structure Of Truncated Yeast Oxysterol Binding Protein Osh4 Length = 406 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query430
1zhx_A438 KES1 protein; oxysterol,sterol binding protein, li 1e-103
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A Length = 438 Back     alignment and structure
 Score =  311 bits (798), Expect = e-103
 Identities = 82/431 (19%), Positives = 145/431 (33%), Gaps = 65/431 (15%)

Query: 23  TEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYS 82
             D    A    W       + K +      D+ S ++ P FI  P S+ +      E+ 
Sbjct: 2   AMDPSQYASSSSWTS-----FLKSIAS-FNGDL-SSLSAPPFILSPISLTEFSQYWAEHP 54

Query: 83  HLLDLADECED----------------PYMRLVYASSWALSIY--------FAYRRAWKP 118
            L        D                   R++  + W +S           +     KP
Sbjct: 55  ELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKP 114

Query: 119 FNPVLGETFEMV-------NHGGVTFIAEQVSHHPPMSAGHAENE--HFIYDVTSKLRTK 169
            NP LGE F            G    ++EQVSHHPP++A    N+         ++++  
Sbjct: 115 LNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKAS 174

Query: 170 FLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDK 229
           F   S+ +         L        + PPP  +  ++    +++  G   + + +TG  
Sbjct: 175 FTK-SLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLL 232

Query: 230 VVLYFQPCGWFGAGRYEVDGYVYDAA------EQPKILMTGKWNESMSYQPCDSEGEPLP 283
            V+ F   G+F   +      +Y  +      E+    ++G+W+ S      + + E   
Sbjct: 233 CVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEES-- 290

Query: 284 GTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKA 343
               +  +  A  P             LN      +  L S         A++ GD +  
Sbjct: 291 ----RLFYDAARIP----------AEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLI 336

Query: 344 GSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATL 403
              K+ LEE QR  ++  EAK   +  +WF   D  + TP     V   +  + +L + L
Sbjct: 337 AKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY-SVTPEEGALVPEKDDTFLKLASAL 395

Query: 404 DNSESLGEINP 414
           + S        
Sbjct: 396 NLSTKNAPSGT 406
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query430
1zhx_A438 KES1 protein; oxysterol,sterol binding protein, li 100.0
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A Back     alignment and structure
Probab=100.00  E-value=3.2e-90  Score=712.32  Aligned_cols=319  Identities=24%  Similarity=0.399  Sum_probs=285.8

Q ss_pred             cccchHHHHHhhccCc---cccCCcccCcccccccchhHHhhccccchHhhhcccCCC----------C------HHHHH
Q 014128           38 EERDNYWKMMQKYIGA---DVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECE----------D------PYMRL   98 (430)
Q Consensus        38 ~~~~slw~~lk~~iGk---DLts~islPv~~~EP~S~Lqr~ae~~ey~~lL~~Aa~~~----------d------~~eRm   98 (430)
                      ..+.|+|+.|+++||+   ||+ +|||||+||||+|+||+++++|+|++||++||..+          |      |++||
T Consensus         8 ~~~~s~w~~~lK~i~k~g~DLS-kIslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm   86 (438)
T 1zhx_A            8 YASSSSWTSFLKSIASFNGDLS-SLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARM   86 (438)
T ss_dssp             HTTSHHHHHHHHTTTTCCSCGG-GSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHH
T ss_pred             cccccHHHHHHHHhhhcCCChh-hcccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHH
Confidence            5678999988778865   996 59999999999999999999999999999888766          9      99999


Q ss_pred             HHHHHHHHhhhhh-c-------cccCCCCCCCCCCeEEEEecC------C-eEEEEeecccCCCeeEEEEECC--CeEEE
Q 014128           99 VYASSWALSIYFA-Y-------RRAWKPFNPVLGETFEMVNHG------G-VTFIAEQVSHHPPMSAGHAENE--HFIYD  161 (430)
Q Consensus        99 ~~V~af~iS~~~~-~-------~r~~KPfNPiLGETfe~~~~~------g-~~~iaEQVSHHPPIsA~~~e~~--~~~~~  161 (430)
                      ++|++|+||+|+. +       .+.+|||||||||||+|.+++      | ++|||||||||||||||||+++  +|.++
T Consensus        87 ~~V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~  166 (438)
T 1zhx_A           87 LAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQ  166 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEE
T ss_pred             HHHHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEE
Confidence            9999999999864 2       568999999999999999854      6 8999999999999999999996  59999


Q ss_pred             EEeceeeeEEee-EEEEEEeeEEEEEEecCCeEEEEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEecCccc
Q 014128          162 VTSKLRTKFLGN-SIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWF  240 (430)
Q Consensus       162 ~~~~~~~kF~G~-sv~v~~~G~~~i~~~~~ge~Y~~~~P~~~v~nii~G~~~~e~~G~~~I~~~~tg~~a~i~F~~~~~f  240 (430)
                      |+..+++||+|+ ||+|.+.|.++|+|+  ||+|+|++|+++|+|||+|++|+|++|+|.|+| +||++|+|+|+++|||
T Consensus       167 g~~~~kskF~G~~Sv~v~~~G~~~l~l~--~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~-~tg~~~~l~F~~kg~f  243 (438)
T 1zhx_A          167 GYNQIKASFTKSLMLTVKQFGHTMLDIK--DESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYF  243 (438)
T ss_dssp             EEEEEEEEECTTCCEEEEEECCEEEEET--TEEEEEECCCEEEECTTTTCCEEEECSEEEEEE-TTSCEEEEEEECSSSS
T ss_pred             EEeeeEEEEcCceEEEEEcceEEEEEEC--CcEEEEecCcEEEEEEEecceeEecCCeEEEEc-CCCCEEEEEEcCCCCc
Confidence            999999999999 999999999999997  899999999999999999999999999999999 7999999999999999


Q ss_pred             cCcceEEEEEEECC------CCCceEEEeeeecceeeeeeCCCCCCCCCCCceeEEEeeccCCCCCccccceeeeecCCC
Q 014128          241 GAGRYEVDGYVYDA------AEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSF  314 (430)
Q Consensus       241 g~~~~~v~G~V~d~------~g~~~~~i~G~W~~~l~~~~~~~~g~~~~~~~~~~lW~~~~~p~~~~y~ft~fa~~LNe~  314 (430)
                      |++.|.|+|.|++.      +|+++++|.|+|++.|++.+...+      .....+|++.+.|...      +  .+   
T Consensus       244 ~g~~n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~~------~~~~~~~~~~~~~~~~------~--~v---  306 (438)
T 1zhx_A          244 SGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK------EESRLFYDAARIPAEH------L--NV---  306 (438)
T ss_dssp             CSSSSEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG------GGCEEEEETTTSCCCC------C--BC---
T ss_pred             CCCccEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCCC------ccceEEeccCCCCCcc------c--cC---
Confidence            99999999999985      567899999999999999765321      1135799998876421      1  11   


Q ss_pred             CCCCCcCCCCCCcc--chhHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCC
Q 014128          315 DTAPKKLLPSDSRL--RPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDE  378 (430)
Q Consensus       315 ~~~~~~~~ptDSR~--RpD~rale~Gd~d~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d  378 (430)
                      .+ ...++|||||+  |||+|||++||++.|+++|.+|||+||++||+|+++|++|+||||++.++
T Consensus       307 ~p-~e~q~ptdSR~~Wr~d~~ale~Gd~d~A~~eK~rLEe~QR~~rk~re~~g~~w~Pr~F~~~~~  371 (438)
T 1zhx_A          307 KP-LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY  371 (438)
T ss_dssp             CC-GGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEEC
T ss_pred             CC-hhhCCCcccchhhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccceEEECCc
Confidence            11 13568999997  89999999999999999999999999999999999999999999999876

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 430
d1zhxa1433 d.338.1.1 (A:2-434) Oxysterol-binding protein homo 9e-87
>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 433 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Oxysterol-binding protein-like
superfamily: Oxysterol-binding protein-like
family: Oxysterol-binding protein
domain: Oxysterol-binding protein homolog 4, KES1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  269 bits (688), Expect = 9e-87
 Identities = 83/439 (18%), Positives = 142/439 (32%), Gaps = 65/439 (14%)

Query: 37  QEERDNYWKMMQKYIGADVQSL--VTLPVFISEPNSVLQRMAELMEYSHLLDLADECED- 93
           Q    + W    K I +    L  ++ P FI  P S+ +      E+  L        D 
Sbjct: 2   QYASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDD 61

Query: 94  ---------------PYMRLVYASSWALSIY--------FAYRRAWKPFNPVLGETFEMV 130
                             R++  + W +S           +     KP NP LGE F   
Sbjct: 62  NYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGK 121

Query: 131 -------NHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTK-FLGNSIDVYPVGR 182
                    G    ++EQVSHHPP++A    N+     +    + K     S+ +     
Sbjct: 122 WENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQF 181

Query: 183 TRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGA 242
               L        + PPP  +  ++    +++  G   + + +TG   V+ F   G+F  
Sbjct: 182 GHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFSG 240

Query: 243 GRYEVDGYVYDAA------EQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADA 296
            +      +Y  +      E+    ++G+W+ S      + + E       +  +  A  
Sbjct: 241 KKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEES------RLFYDAARI 294

Query: 297 PEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRA 356
           P             LN      +  L S         A++ GD +     K+ LEE QR 
Sbjct: 295 P----------AEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRE 344

Query: 357 EKRIREAKDDMFTPKWF-DLSDEVTP----TPWGDLEVY---RYNGKYSELRATLDNSES 408
            ++  EAK   +  +WF D    VTP          + +         S   A       
Sbjct: 345 LRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLASALNLSTKNAPSGTLVG 404

Query: 409 LGEINPETTEFNPWQYEDS 427
             E   E      W+++  
Sbjct: 405 DKEDRKEDLSSIHWRFQRE 423

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query430
d1zhxa1433 Oxysterol-binding protein homolog 4, KES1 {Baker's 100.0
>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Oxysterol-binding protein-like
superfamily: Oxysterol-binding protein-like
family: Oxysterol-binding protein
domain: Oxysterol-binding protein homolog 4, KES1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-85  Score=677.04  Aligned_cols=346  Identities=21%  Similarity=0.323  Sum_probs=287.1

Q ss_pred             cccchHHHHHhhcc---CccccCCcccCcccccccchhHHhhccccchHhhhcccCCCC----------------HHHHH
Q 014128           38 EERDNYWKMMQKYI---GADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECED----------------PYMRL   98 (430)
Q Consensus        38 ~~~~slw~~lk~~i---GkDLts~islPv~~~EP~S~Lqr~ae~~ey~~lL~~Aa~~~d----------------~~eRm   98 (430)
                      ....|.|+.+.++|   |+||+ +||||++||||+|+|||+|++|+|++||++||.++|                |++||
T Consensus         3 ~~~~s~w~~flk~i~s~~~DLs-~is~P~~i~eP~S~Le~~a~~~ey~~Ll~~aa~~~d~~~~~~~~~~~~~e~~p~eRm   81 (433)
T d1zhxa1           3 YASSSSWTSFLKSIASFNGDLS-SLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARM   81 (433)
T ss_dssp             HTTSHHHHHHHHTTTTCCSCGG-GSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHH
T ss_pred             cccccHHHHHHHHHhhcCCccc-eeeeCceecccccHHHHHHHHHhhHHHHHHHhhcccccccccccccccccCCHHHHH
Confidence            34578997666665   77997 499999999999999999999999999999987666                89999


Q ss_pred             HHHHHHHHhhhhh--------ccccCCCCCCCCCCeEEEEecC-------CeEEEEeecccCCCeeEEEEECC--CeEEE
Q 014128           99 VYASSWALSIYFA--------YRRAWKPFNPVLGETFEMVNHG-------GVTFIAEQVSHHPPMSAGHAENE--HFIYD  161 (430)
Q Consensus        99 ~~V~af~iS~~~~--------~~r~~KPfNPiLGETfe~~~~~-------g~~~iaEQVSHHPPIsA~~~e~~--~~~~~  161 (430)
                      ++|++|+||+|+.        ..+.+|||||||||||+|.+++       +++|+|||||||||||||||+++  +|.++
T Consensus        82 ~~V~~f~lS~~~~~~~~~~~~~~~~kKPfNPiLGETfe~~~~d~~~~~~~~~~~iaEQVSHHPPIsA~~~~~~~~~~~~~  161 (433)
T d1zhxa1          82 LAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQ  161 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEE
T ss_pred             HHHHHHHHHHhhhhhcccccccccccCCCCCcccceEEEEEecCCCCcCCcEEEEEeCCCCCCcceeEEEEcCCCCEEEE
Confidence            9999999999863        3578999999999999999843       58999999999999999999986  49999


Q ss_pred             EEeceeeeEEeeEEEEEEeeEEEEEEecCCeEEEEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEecCcccc
Q 014128          162 VTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFG  241 (430)
Q Consensus       162 ~~~~~~~kF~G~sv~v~~~G~~~i~~~~~ge~Y~~~~P~~~v~nii~G~~~~e~~G~~~I~~~~tg~~a~i~F~~~~~fg  241 (430)
                      |+..++++|.| ++.|.+.|..++.|..++|+|+|++|+++|+|||+|++|+|++|+|.|+| +||++|+|+|+++||||
T Consensus       162 g~~~~~~~f~~-s~~i~~~g~~~~~l~~~~E~Y~~~~P~~~i~gii~G~~~vE~~G~~~I~~-~tg~~a~i~f~~kg~fs  239 (433)
T d1zhxa1         162 GYNQIKASFTK-SLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFS  239 (433)
T ss_dssp             EEEEEEEEECT-TCCEEEEEECCEEEEETTEEEEEECCCEEEECTTTTCCEEEECSEEEEEE-TTSCEEEEEEECSSSSC
T ss_pred             EEeeeeeeecc-eEEEEEcceEEEEEEecCcEEEEecCCEEEEEEEcCCceEEecceEEEEe-CCCCEEEEEEcCCCccC
Confidence            99999999954 66777777777777778999999999999999999999999999999998 79999999999999999


Q ss_pred             CcceEEEEEEECCCC------CceEEEeeeecceeeeeeCCCCCCCCCCCceeEEEeeccCCCCCccccceeeeecCCCC
Q 014128          242 AGRYEVDGYVYDAAE------QPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFD  315 (430)
Q Consensus       242 ~~~~~v~G~V~d~~g------~~~~~i~G~W~~~l~~~~~~~~g~~~~~~~~~~lW~~~~~p~~~~y~ft~fa~~LNe~~  315 (430)
                      +..|.|+|.|++.++      +.+++|.|+|++.+.+......      .....+|++.+.|           ..+|++.
T Consensus       240 g~~~~v~g~I~~~~~~~~~~~~~l~~i~G~W~~~~~~~~~~~~------~~~~~~~d~~~~~-----------~~~~~~~  302 (433)
T d1zhxa1         240 GKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK------EESRLFYDAARIP-----------AEHLNVK  302 (433)
T ss_dssp             SSSSEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG------GGCEEEEETTTSC-----------CCCCBCC
T ss_pred             CCcceEEEEEEeCCCCCccccceeEEEecccCceEEEEeCCCC------CcceEEEeCCcCC-----------cccccCC
Confidence            999999999998765      3579999999999998764321      1234577776554           3444444


Q ss_pred             CCC-CcCCCCCCccchhHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCCCCCCCCCCcc--eEEe
Q 014128          316 TAP-KKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLE--VYRY  392 (430)
Q Consensus       316 ~~~-~~~~ptDSR~RpD~rale~Gd~d~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~--~w~y  392 (430)
                      +.. ...+|||+|+|||++||++||++.|+++|.+|||+||++||+|+++|++|+||||++++++.+   ++..  .+.-
T Consensus       303 p~e~~~p~eS~~~wr~d~~ale~Gd~d~A~~eK~~LEe~QR~~Rk~re~~g~~w~Pr~F~~~~~~~~---~~~~~~~~~~  379 (433)
T d1zhxa1         303 PLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVT---PEEGALVPEK  379 (433)
T ss_dssp             CGGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEECSSS---CCTTSBCCCT
T ss_pred             CcccCCCCCCccccHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcEeccCCCCC---ccccccCCcc
Confidence            422 122456666899999999999999999999999999999999999999999999999877532   1111  1222


Q ss_pred             ccchhhhcccCCCC
Q 014128          393 NGKYSELRATLDNS  406 (430)
Q Consensus       393 ~g~Yw~~r~~~~~~  406 (430)
                      .-.|.+.+...+|+
T Consensus       380 ~~~~~~l~~~~~~~  393 (433)
T d1zhxa1         380 DDTFLKLASALNLS  393 (433)
T ss_dssp             TCHHHHHHHHHTBC
T ss_pred             chHHHHHhhccCCc
Confidence            23366666555554