Citrus Sinensis ID: 014221

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
MEQPLLSEKRSKSGGKESGRWSSYEHVGRTNSFIPTASLAGTELSVEEIRSASGFSGHYPPSIHAPLISSPEPDPHQQAIVYQGQGGYFGGDYRAKANEFQGQILDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVIAERAHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKDYPSRFCWGLCPCLEWLKL
cccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEEEEEEEEEEEEEEEEEEEcccccccccccccccccccccccccEEcccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccEEcccccccccccccccccccEEEEEEEEEEEEEEEcccccEEcccccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEccEEEEEEEEEEEEEEccEEEEEEEEEcccEEcccccccccccccccccccccc
cccccccccccccccccccccccHHEEccccccccccccccccccHHHccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEccccEEEEEEEEEEEEccccEcccccccccccccccccccccccEccccccccccccccEEEEEEccccEEccccccccccEEEccccccccccccccccccEEcccccccEEEEccccccccccccccccEEEcccccccccEEccccccccEEEEEEEEEEEEEcccccEEEcccccccccHHHHHHccccEEEccccccEcccccccHHHHHHHHHHHHHHHHHccccHHHHHEEEEEEEEEEEEEEEEEccccEEEEEEEcccEEEcccccccccccccHHHHHHcc
meqpllsekrsksggkesgrwssyehvgrtnsfiptaslagtelSVEEIRsasgfsghyppsihaplisspepdphqqaivyqgqggyfggdyrAKANEFQGQILDEVEIRELLIDhvghrccwgsrpartwkihAVEDCNVYVGTLETFIEERetisetepylggnidgkdngpalgtweldlrsqfpvlfvphqetrvkvprsetikkcpdcvgrgnavcpscnanqepeyykekqmsqcfncygrgliahkdgsdtictkcngkgtipcatcgsrglikcrkcggsgsllTRSFAIVRWKTLStrkvsatsgsasvpdevfhrakgvqlcntqayqcspaffadsfflnKFSSEViaerahvpptariicerhtisvvpvtrvtmtqrgqsFSFYIIgnsrevylkdypsrfcwglcpclewlkl
meqpllsekrsksggkesgrwssyehvgrtnsFIPTASLAGTELSVEEIRSASGFSGHYPPSIHAPLISSPEPDPHQQAIVYQGQGGYFGGDYRAKANEFQGQILDEVEIRELLIDHVGHRCCWGsrpartwkihavEDCNVYVGTLETFIEERETisetepylggnidGKDNGPALGTWELDLRSQFPVLFVPhqetrvkvprsetikkcpdcvgrgnavcPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLstrkvsatsgsasvpdevFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVIAERAhvpptariicerhtisvvpvtrvtmtqrgQSFSFYIIGNSREVYLKDYPSRFCWGLCPCLEWLKL
MEQPLLsekrsksggkesgrwssYEHVGRTNSFIPTASLAGTELSVEEIRSASGFSGHYPPSIHAPLISSPEPDPHQQAIVyqgqggyfggDYRAKANEFQGQILDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVIAERAHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKDYPSRFCWGLCPCLEWLKL
******************************************************************************AIVYQGQGGYFGGDYRAKANEFQGQILDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLSTRKV*********PDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVIAERAHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKDYPSRFCWGLCPCLEWL**
************************************************************************************************************EIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISET*******************WELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPE*****QMSQCFNCYGRGL***********************TCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLSTR*VS*****ASVPDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKF***************RIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKDYPSRFCWGLCPCLEWLKL
***********************YEHVGRTNSFIPTASLAGTELSVEEIRSASGFSGHYPPSIHAPLISSPEPDPHQQAIVYQGQGGYFGGDYRAKANEFQGQILDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLS************VPDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVIAERAHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKDYPSRFCWGLCPCLEWLKL
*****************************TN**************************HYPPSIHAPLISSPEPDPHQQAIV**GQGGYFGGDYRAKANEFQGQILDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVIAERAHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKDYPSRFCWGLCPCLEWLKL
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MEQPLLSEKRSKSGGKESGRWSSYEHVGRTNSFIPTASLAGTELSVEEIRSASGFSGHYPPSIHAPLISSPEPDPHQQAIVYQGQGGYFGGDYRAKANEFQGQILDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVIAERAHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKDYPSRFCWGLCPCLEWLKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query428 2.2.26 [Sep-21-2011]
Q9Y2M2353 Protein SSUH2 homolog OS= yes no 0.691 0.838 0.291 5e-26
Q8C3L1340 Protein SSUH2 homolog OS= yes no 0.492 0.620 0.278 2e-14
>sp|Q9Y2M2|SSUH2_HUMAN Protein SSUH2 homolog OS=Homo sapiens GN=SSUH2 PE=1 SV=1 Back     alignment and function desciption
 Score =  119 bits (298), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 139/316 (43%), Gaps = 20/316 (6%)

Query: 105 LDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYL 164
           + E   RE L+  V  +CC+ S  A    I  ++   +    LETF E R +    +P+ 
Sbjct: 52  MTEEVAREALLSFVDSKCCYSSTVAGDLVIQELKRQTLCRYRLETFSESRISEWTFQPFT 111

Query: 165 GGNIDGKDNGPALGTWELDLRSQFPVLFVPHQETR-VKVPRSETIKKCPDCVGRGNAVCP 223
             ++DG   G +   W  D++ Q P +F   ++TR  +VP S  +K+C  C GRG   C 
Sbjct: 112 NHSVDGPQRGASPRLW--DIKVQGPPMF--QEDTRKFQVPHSSLVKECHKCHGRGRYKCS 167

Query: 224 SCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKC 283
            C+              +C +C G      K      C  C G G   C+TC  RG   C
Sbjct: 168 GCHG---------AGTVRCPSCCG---AKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTC 215

Query: 284 RKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQCSPA 343
             C G   LL     ++ WK      VS      + P E+  +AKG  L   +     P 
Sbjct: 216 ATCKGEKKLLHFIQLVIMWKNSLFEFVS--EHRLNCPRELLAKAKGENLFKDENSVVYPI 273

Query: 344 FFADSFFLNKFSSEVIAER-AHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGN 402
                  ++  S   IAE  A +   AR++ +R TI ++P+T V    +G+++ +YI G 
Sbjct: 274 VDFPLRDISLASQRGIAEHSAALASRARVLQQRQTIELIPLTEVHYWYQGKTYVYYIYGT 333

Query: 403 SREVYLKDYPSRFCWG 418
             +VY  DYP R+C G
Sbjct: 334 DHQVYAVDYPERYCCG 349

Homo sapiens (taxid: 9606)
>sp|Q8C3L1|SSUH2_MOUSE Protein SSUH2 homolog OS=Mus musculus GN=Ssuh2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query428
255573913426 conserved hypothetical protein [Ricinus 0.992 0.997 0.797 0.0
225440582432 PREDICTED: uncharacterized protein C3orf 0.992 0.983 0.766 0.0
297740262426 unnamed protein product [Vitis vinifera] 0.992 0.997 0.766 0.0
356520977427 PREDICTED: uncharacterized protein C3orf 0.992 0.995 0.762 0.0
449460323430 PREDICTED: uncharacterized protein C3orf 0.992 0.988 0.706 1e-179
388511901426 unknown [Lotus japonicus] 0.978 0.983 0.740 1e-179
357451247423 hypothetical protein MTR_2g063200 [Medic 0.978 0.990 0.729 1e-178
147815967467 hypothetical protein VITISV_001136 [Viti 0.941 0.862 0.756 1e-173
449485217378 PREDICTED: uncharacterized protein C3orf 0.876 0.992 0.749 1e-169
312283315415 unnamed protein product [Thellungiella h 0.964 0.995 0.655 1e-164
>gi|255573913|ref|XP_002527875.1| conserved hypothetical protein [Ricinus communis] gi|223532726|gb|EEF34506.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/429 (79%), Positives = 377/429 (87%), Gaps = 4/429 (0%)

Query: 1   MEQPLLSEKRSKSGGKESGRWSSYEHVGRTNSFIPTASLAGTELSVEEIRSASGFSGHYP 60
           ME+PLLSEKRS+   KES +WSSY++VGRT S  PTASLAGTE+SVEEIRSAS    HYP
Sbjct: 1   MEEPLLSEKRSEVDEKESEKWSSYQYVGRTGSVFPTASLAGTEVSVEEIRSASVSDHHYP 60

Query: 61  PSIHAPLISSPEPDPHQQAIVYQGQGGYFGGDYRAKANEFQGQILDEVEIRELLIDHVGH 120
           PS+HA LISSPEPDP++QAI YQG    +GG+Y   + +F+GQILDEVEIRELLIDHVGH
Sbjct: 61  PSLHAALISSPEPDPNEQAIAYQGA---YGGEYGGTSTDFRGQILDEVEIRELLIDHVGH 117

Query: 121 RCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNGPALGTW 180
           RCCWGSRPARTWKIHA+EDCNVYVGTL+TF+EERETISETEPYL GNIDGK+ GP LG W
Sbjct: 118 RCCWGSRPARTWKIHAIEDCNVYVGTLDTFLEERETISETEPYLSGNIDGKEKGPELGVW 177

Query: 181 ELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMS 240
           ELDLRSQFPVLF PH+ETR ++P SE I+KC  C GRG+ VCP+CN +QEP +YKE QMS
Sbjct: 178 ELDLRSQFPVLFTPHKETRTRIPHSEIIEKCTGCKGRGDIVCPTCNTDQEPGFYKENQMS 237

Query: 241 QCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIV 300
            C  CYGRGLIAH+DGSDT+CT C+GKG +PCATCGSRGLIKC KC GSGSLLT + AIV
Sbjct: 238 PCPACYGRGLIAHRDGSDTVCTNCSGKGKVPCATCGSRGLIKCEKCRGSGSLLTYTVAIV 297

Query: 301 RWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVIA 360
           RWKTLSTRKVSATSG+ASVPDEVFHRAKGVQLCNTQAYQC+PAFFADSFFLNKFSSEVIA
Sbjct: 298 RWKTLSTRKVSATSGAASVPDEVFHRAKGVQLCNTQAYQCTPAFFADSFFLNKFSSEVIA 357

Query: 361 ERAHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKD-YPSRFCWGL 419
           ER  VP TAR+ICERHTISVVPVTRVTM  RG+SFSFYIIG SREVYLKD YPSRFCWGL
Sbjct: 358 ERPSVPITARVICERHTISVVPVTRVTMAHRGRSFSFYIIGFSREVYLKDYYPSRFCWGL 417

Query: 420 CPCLEWLKL 428
           CPCLEWLKL
Sbjct: 418 CPCLEWLKL 426

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225440582|ref|XP_002277232.1| PREDICTED: uncharacterized protein C3orf32-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740262|emb|CBI30444.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520977|ref|XP_003529135.1| PREDICTED: uncharacterized protein C3orf32-like [Glycine max] Back     alignment and taxonomy information
>gi|449460323|ref|XP_004147895.1| PREDICTED: uncharacterized protein C3orf32-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388511901|gb|AFK44012.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357451247|ref|XP_003595900.1| hypothetical protein MTR_2g063200 [Medicago truncatula] gi|355484948|gb|AES66151.1| hypothetical protein MTR_2g063200 [Medicago truncatula] Back     alignment and taxonomy information
>gi|147815967|emb|CAN72578.1| hypothetical protein VITISV_001136 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449485217|ref|XP_004157103.1| PREDICTED: uncharacterized protein C3orf32-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|312283315|dbj|BAJ34523.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query428
TAIR|locus:2065696419 AT2G38000 [Arabidopsis thalian 0.974 0.995 0.625 7.1e-148
UNIPROTKB|F1PZB5380 C3orf32 "Uncharacterized prote 0.677 0.763 0.309 7.4e-34
UNIPROTKB|G3N201375 Bt.74373 "Uncharacterized prot 0.705 0.805 0.295 2.9e-32
UNIPROTKB|I3LP29375 C3orf32 "Uncharacterized prote 0.707 0.808 0.3 5.4e-31
UNIPROTKB|Q9Y2M2353 SSUH2 "Protein SSUH2 homolog" 0.691 0.838 0.291 2.1e-29
ZFIN|ZDB-GENE-060421-4694382 zgc:136895 "zgc:136895" [Danio 0.591 0.662 0.279 2.3e-23
ZFIN|ZDB-GENE-070424-72417 zgc:162724 "zgc:162724" [Danio 0.593 0.609 0.284 2.7e-23
ZFIN|ZDB-GENE-060929-994361 zgc:153440 "zgc:153440" [Danio 0.495 0.587 0.282 1.7e-22
UNIPROTKB|F1N504340 Bt.74373 "Uncharacterized prot 0.427 0.538 0.308 3.5e-18
MGI|MGI:2443733340 Ssu2 "ssu-2 homolog (C. elegan 0.427 0.538 0.293 3.4e-15
TAIR|locus:2065696 AT2G38000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
 Identities = 269/430 (62%), Positives = 325/430 (75%)

Query:     1 MEQPLLXXXXXXXXXXXXXXXXXYEHVGRTNSFIPTASLAGTEL-SVEEIRSASGFSGHY 59
             M++PLL                 Y+++ R +S     S AG  + +VEEIR+AS  S   
Sbjct:     1 MDKPLLSGSEKTNESERLDS---YQYLQRNSSSARNPSFAGAGVVTVEEIRTASAVSSD- 56

Query:    60 PPSIHAPLISSPEPDPHQQAIVXXXXXXXXXXDYRAKANEFQGQILDEVEIRELLIDHVG 119
             PPS++ P+I +P   P  QAI            +  +    Q Q LDE+EIRELLIDH+G
Sbjct:    57 PPSLYPPVIKTPVSLPIPQAI---GYPSASGAGHELQ----QRQFLDEIEIRELLIDHIG 109

Query:   120 HRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNGPALGT 179
             HRCCWGSRPARTWKIHAVEDCNVYVGTL+TFIEERE +++T P+ GG  +GK +G   G 
Sbjct:   110 HRCCWGSRPARTWKIHAVEDCNVYVGTLDTFIEEREALTQTVPFTGGEFNGKKHGSEPGL 169

Query:   180 WELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQM 239
             WELDLR QFP LFVP++ET+V VP SET++KC  C GRG+ VCP+CNA+ EP +YKE QM
Sbjct:   170 WELDLRPQFPTLFVPYKETQVLVPNSETVEKCTGCTGRGDVVCPTCNADGEPGFYKENQM 229

Query:   240 SQCFNCYGRGLIAHKDGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAI 299
              +C  CYGRGL+AHKDGSDTICT CNGKG +PC TC SRGLIKC+ C  +GSLLT S A+
Sbjct:   230 MKCSTCYGRGLVAHKDGSDTICTNCNGKGKLPCPTCQSRGLIKCQTCDSTGSLLTSSIAV 289

Query:   300 VRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCNTQAYQCSPAFFADSFFLNKFSSEVI 359
             V+WKTLS RKVSAT G+ SVP+EVF RA+GVQLCNTQAYQC+PA+FADS+FLN+FSSEVI
Sbjct:   290 VKWKTLSKRKVSATRGAGSVPEEVFDRAEGVQLCNTQAYQCTPAYFADSYFLNRFSSEVI 349

Query:   360 AERAHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKDY-PSRFCWG 418
             + RA VPPTA ++CERHTISVVPVTRVTM  RG++FSFYIIG  +E+YLKDY P+RFCWG
Sbjct:   350 SLRAEVPPTANVVCERHTISVVPVTRVTMEDRGKAFSFYIIGFGKEIYLKDYYPARFCWG 409

Query:   419 LCPCLEWLKL 428
             LCPCLEWLK+
Sbjct:   410 LCPCLEWLKV 419
GO:0005737 "cytoplasm" evidence=ISM
UNIPROTKB|F1PZB5 C3orf32 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|G3N201 Bt.74373 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LP29 C3orf32 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y2M2 SSUH2 "Protein SSUH2 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060421-4694 zgc:136895 "zgc:136895" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070424-72 zgc:162724 "zgc:162724" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060929-994 zgc:153440 "zgc:153440" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1N504 Bt.74373 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2443733 Ssu2 "ssu-2 homolog (C. elegans)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00021448001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (489 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query428
PRK14286372 PRK14286, PRK14286, chaperone protein DnaJ; Provis 1e-06
COG1107 715 COG1107, COG1107, Archaea-specific RecJ-like exonu 5e-06
TIGR02349354 TIGR02349, DnaJ_bact, chaperone protein DnaJ 6e-06
TIGR02349354 TIGR02349, DnaJ_bact, chaperone protein DnaJ 9e-06
COG0484371 COG0484, DnaJ, DnaJ-class molecular chaperone with 9e-06
COG0484371 COG0484, DnaJ, DnaJ-class molecular chaperone with 2e-05
PRK14298377 PRK14298, PRK14298, chaperone protein DnaJ; Provis 5e-05
cd1071965 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H 1e-04
PRK14283378 PRK14283, PRK14283, chaperone protein DnaJ; Provis 2e-04
PRK10767371 PRK10767, PRK10767, chaperone protein DnaJ; Provis 5e-04
PRK14282369 PRK14282, PRK14282, chaperone protein DnaJ; Provis 0.001
PRK14289386 PRK14289, PRK14289, chaperone protein DnaJ; Provis 0.001
pfam0068465 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain 0.002
PRK14290365 PRK14290, PRK14290, chaperone protein DnaJ; Provis 0.002
PRK14279392 PRK14279, PRK14279, chaperone protein DnaJ; Provis 0.002
PRK14294366 PRK14294, PRK14294, chaperone protein DnaJ; Provis 0.004
PTZ00037421 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov 0.004
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional Back     alignment and domain information 
 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 29/130 (22%)

Query: 165 GGNIDGKDNGPALGTWELDLRSQFPVLF---VPHQETRVKVPRSETIKKCPDCVGRGNAV 221
           GG+  G+ +GP  G+   DLR    V        +E ++++PR E+   C DC G G + 
Sbjct: 110 GGSGGGRRSGPQRGS---DLRYNLEVSLEDAALGREYKIEIPRLES---CVDCNGSGAS- 162

Query: 222 CPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDG---SDTICTKCNGKGTI---PCATC 275
                        K    + C +C G G I    G     T C  C GKGT+   PC TC
Sbjct: 163 -------------KGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTC 209

Query: 276 GSRGLIKCRK 285
           G +GL + R+
Sbjct: 210 GGQGLQEKRR 219

Length = 372
>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ Back     alignment and domain information
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ Back     alignment and domain information
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40 Back     alignment and domain information
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain Back     alignment and domain information
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 428
KOG2813406 consensus Predicted molecular chaperone, contains 100.0
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 99.91
PRK14298377 chaperone protein DnaJ; Provisional 99.7
PRK14296372 chaperone protein DnaJ; Provisional 99.68
PRK14288369 chaperone protein DnaJ; Provisional 99.68
PRK14278378 chaperone protein DnaJ; Provisional 99.67
PRK14286372 chaperone protein DnaJ; Provisional 99.67
PRK14285365 chaperone protein DnaJ; Provisional 99.67
PRK14295389 chaperone protein DnaJ; Provisional 99.67
PTZ00037421 DnaJ_C chaperone protein; Provisional 99.67
PRK14276380 chaperone protein DnaJ; Provisional 99.66
PRK10767371 chaperone protein DnaJ; Provisional 99.65
PRK14280376 chaperone protein DnaJ; Provisional 99.64
PRK14287371 chaperone protein DnaJ; Provisional 99.63
PRK14277386 chaperone protein DnaJ; Provisional 99.63
PRK14294366 chaperone protein DnaJ; Provisional 99.63
PRK14300372 chaperone protein DnaJ; Provisional 99.63
PRK14284391 chaperone protein DnaJ; Provisional 99.62
PRK14297380 chaperone protein DnaJ; Provisional 99.62
PRK14279392 chaperone protein DnaJ; Provisional 99.6
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 99.6
PRK14282369 chaperone protein DnaJ; Provisional 99.59
PRK14283378 chaperone protein DnaJ; Provisional 99.57
PRK14281397 chaperone protein DnaJ; Provisional 99.57
PRK14291382 chaperone protein DnaJ; Provisional 99.55
PRK14301373 chaperone protein DnaJ; Provisional 99.55
PRK14290365 chaperone protein DnaJ; Provisional 99.52
PRK14292371 chaperone protein DnaJ; Provisional 99.48
PRK14289386 chaperone protein DnaJ; Provisional 99.46
PRK14293374 chaperone protein DnaJ; Provisional 99.43
KOG2813406 consensus Predicted molecular chaperone, contains 99.39
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 99.38
PF0068466 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0 98.87
PLN03165111 chaperone protein dnaJ-related; Provisional 98.6
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 98.4
PLN03165111 chaperone protein dnaJ-related; Provisional 98.16
COG1107 715 Archaea-specific RecJ-like exonuclease, contains D 97.87
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 97.46
COG1107 715 Archaea-specific RecJ-like exonuclease, contains D 97.17
PF0068466 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0 96.78
TIGR02642186 phage_xxxx uncharacterized phage protein. This unc 96.77
PRK14284391 chaperone protein DnaJ; Provisional 96.74
PRK14282369 chaperone protein DnaJ; Provisional 96.73
PRK14296372 chaperone protein DnaJ; Provisional 96.67
PRK14279392 chaperone protein DnaJ; Provisional 96.63
PRK14298377 chaperone protein DnaJ; Provisional 96.62
PTZ00037421 DnaJ_C chaperone protein; Provisional 96.5
PRK14288369 chaperone protein DnaJ; Provisional 96.49
PRK14285365 chaperone protein DnaJ; Provisional 96.46
PRK14278378 chaperone protein DnaJ; Provisional 96.38
PRK14276380 chaperone protein DnaJ; Provisional 96.37
PRK14300372 chaperone protein DnaJ; Provisional 96.29
PRK10767371 chaperone protein DnaJ; Provisional 96.28
PRK14280376 chaperone protein DnaJ; Provisional 96.24
PRK14287371 chaperone protein DnaJ; Provisional 96.18
PRK14286372 chaperone protein DnaJ; Provisional 96.17
PRK14290365 chaperone protein DnaJ; Provisional 96.16
PRK14281397 chaperone protein DnaJ; Provisional 96.14
PRK14295389 chaperone protein DnaJ; Provisional 96.08
PRK14289386 chaperone protein DnaJ; Provisional 96.04
PRK14301373 chaperone protein DnaJ; Provisional 95.99
PRK14277386 chaperone protein DnaJ; Provisional 95.97
PRK14297380 chaperone protein DnaJ; Provisional 95.96
PRK14294366 chaperone protein DnaJ; Provisional 95.82
PRK14293374 chaperone protein DnaJ; Provisional 95.62
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 95.36
KOG2824281 consensus Glutaredoxin-related protein [Posttransl 95.19
PRK14283378 chaperone protein DnaJ; Provisional 95.09
KOG2824281 consensus Glutaredoxin-related protein [Posttransl 94.85
PRK14292371 chaperone protein DnaJ; Provisional 94.77
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 94.66
PRK14291382 chaperone protein DnaJ; Provisional 94.46
TIGR02642186 phage_xxxx uncharacterized phage protein. This unc 94.08
cd03031147 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d 92.02
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 90.13
cd03031147 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d 90.11
TIGR03835871 termin_org_DnaJ terminal organelle assembly protei 87.65
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.1e-84  Score=632.30  Aligned_cols=396  Identities=28%  Similarity=0.470  Sum_probs=364.3

Q ss_pred             CCCcccccceeccccCCcccCCCCCCcc-chHHHHhhhcccCCCCCCCCCCCCCCCCCCCCccceeeecCCCCcCCcccc
Q 014221           16 KESGRWSSYEHVGRTNSFIPTASLAGTE-LSVEEIRSASGFSGHYPPSIHAPLISSPEPDPHQQAIVYQGQGGYFGGDYR   94 (428)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (428)
                      +++.+..+|||..+.++++.+.+.++++ |+++|||.|.+.+.- |||+.++.+.++.+++.++++.|.-.   .|    
T Consensus         7 ~~l~r~~~l~~~q~~s~sar~~~~~~~~ii~~~e~R~A~~~es~-~ps~kpp~vk~~v~~rIp~~t~~~~~---~~----   78 (406)
T KOG2813|consen    7 SLLPRDEDLEKHQKFSTSARSKMQYFDDIIPFFECREALEKESK-RPSWKPPTVKKMVFDRIPPSTSIHYI---LE----   78 (406)
T ss_pred             ccCcccccchhhhhhcccccCcccccCcccchhhhhhhcccccC-CcccCCCcccccccccCCcccccccc---cc----
Confidence            6778889999999999999999999888 899999999986644 67999999999999999988865443   22    


Q ss_pred             CCCCcceeccCCHHHHHHHHHHHHhccCccCCCccceeEEEEeeeeeeEEEEEeeeeeeeccccccccCcCCCCCCCCCC
Q 014221           95 AKANEFQGQILDEVEIRELLIDHVGHRCCWGSRPARTWKIHAVEDCNVYVGTLETFIEERETISETEPYLGGNIDGKDNG  174 (428)
Q Consensus        95 ~~~~~~~~~~lsE~eaReal~~~v~~~cc~gs~pa~~~~i~~i~~~n~y~Y~LeTF~E~Rs~~~~~ePy~g~~vdg~~~g  174 (428)
                          .+.--.+||+++||||.++++++|||+|.+|++|+|++++.+|.|+|+|+||.|+|...|++.||++..+||+..|
T Consensus        79 ----s~~e~~~~ee~~real~~~~~~~cC~~S~~ag~l~i~~~e~~~~~~~~l~tfveer~~~~q~~PfT~~~~dG~~hg  154 (406)
T KOG2813|consen   79 ----SFTEARSTEEATREALFAAMSEACCSLSGGAGALSIWDFEVMPGHLFVLQTFVEERPGSSQINPFTACNSDGTIHG  154 (406)
T ss_pred             ----ccchhcccHHHHHHHHHHHhhchhhhcCCCcccccceehhcCcceEEeeeeeeccccccceecccccCCcCCcccc
Confidence                3332338999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccceeeeeeeeecCCcEEEEEeecCCCceeCCccccCceeecCCCCCCCCCccccCcccccCCccccccEEEEe
Q 014221          175 PALGTWELDLRSQFPVLFVPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHK  254 (428)
Q Consensus       175 p~~g~WevDl~~~lp~~F~~G~~~~i~vp~ss~V~~C~~C~G~G~~~C~~C~G~g~~g~~~~~~~~~C~~C~GsG~i~~~  254 (428)
                      ..|+.|++|+..+.|.||+.-+. .+.|||++.|+.|+.|.|+|+..|+.|+|+|. +.|+.+.++.|..|-|  ...+.
T Consensus       155 ~~prlw~~d~~~~gp~mf~~~~~-~~~vphs~~v~~ch~c~gRG~~vc~gc~g~G~-~~y~~~~~m~c~sc~G--~~~~k  230 (406)
T KOG2813|consen  155 FHPRLWGTDKCSRGPGMFSGVAH-PAVVPHSMIVTFCHACLGRGAMVCHGCSGSGS-NSYGIGTPMHCMSCTG--VPPPK  230 (406)
T ss_pred             cCccccccccccCCCCccccccc-ceeccchHhhhhhhcccCCCceeccCcCCCCc-cccccCcceecccccC--CCCCC
Confidence            99999999999999999976554 89999999999999999999999999999995 7888889999999998  44455


Q ss_pred             cCccccCCCCCCccEEeCcCCCCCCcccCCCCCCCceeEEEEEEEEEEeeeeeeeeecCCCCCCCCCcceEEecCcceeE
Q 014221          255 DGSDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLSTRKVSATSGSASVPDEVFHRAKGVQLCN  334 (428)
Q Consensus       255 ~G~~~~C~~C~G~G~~~C~tC~G~G~~~C~~C~G~G~l~~~~~l~V~~~~~v~~~v~a~~~~~g~p~dl~~rvkg~~lf~  334 (428)
                      +|+...|..|+|+|+..|++|+|+|+++|.+|+|.|.|+++.++.|.|++...++|+++..++.+|++||.+++|+.||+
T Consensus       231 ~gt~~~C~~C~G~G~~~C~tC~grG~k~C~TC~gtgsll~~t~~vV~wKn~~krkVSehr~~~~iPeell~~AeG~~~f~  310 (406)
T KOG2813|consen  231 IGTHDLCYMCHGRGIKECHTCKGRGKKPCTTCSGTGSLLNYTRIVVYWKNEKKRKVSEHRTESEIPEELLFQAEGKRIFE  310 (406)
T ss_pred             CCccchhhhccCCCcccCCcccCCCCcccccccCccceeeeEEEEEEeechhhhhhhhhcccccCcHHHHHhhhcchhhh
Confidence            67889999999999999999999999999999999999999999999999999999998777889999999999999999


Q ss_pred             ecCcEEEeee-ccchhhhchhhHHHHHhh-ccCCCCceeeecceEEEEEeceeEEEeecCceeEEEEEecCceecCCC-C
Q 014221          335 TQAYQCSPAF-FADSFFLNKFSSEVIAER-AHVPPTARIICERHTISVVPVTRVTMTQRGQSFSFYIIGNSREVYLKD-Y  411 (428)
Q Consensus       335 ~e~~~~~Pi~-F~d~~~l~~~sq~lI~eh-~~~~~~~RIl~QR~tI~~IPVTeV~y~~~gk~~~~yVyG~e~~V~a~d-Y  411 (428)
                      +++..++||. |+.++ +|.+|+..+++| +++++++|||+|||||++||||+|||+++||.|+|||||++++||+|| |
T Consensus       311 ~en~~iypis~~~~~D-v~~~sk~~~a~h~a~~~~~arVi~qRhti~~iPiT~Vh~~~~Gk~~~fYIyGt~k~~Y~~d~y  389 (406)
T KOG2813|consen  311 EENDYIYPISQYQEED-VNKMSKLFCAQHLAKCMGVARVIRQRHTINAIPITKVHFSLGGKKGIFYIYGTQKLCYFPDFY  389 (406)
T ss_pred             hccceEEeccccchhh-HHHHHHHHHHHHHHhccchhhhhhhhceeeeeeeeEEEEEecCceEEEEEEecCcEEeccccc
Confidence            9999999984 55443 788888889988 578999999999999999999999999999999999999999999999 9


Q ss_pred             ccccccCcccccccccC
Q 014221          412 PSRFCWGLCPCLEWLKL  428 (428)
Q Consensus       412 P~~cC~g~~~~~~~~~~  428 (428)
                      |.++|||.|+|++||+.
T Consensus       390 p~rfC~gic~~~~~l~~  406 (406)
T KOG2813|consen  390 PKRFCFGICYSNKYLTA  406 (406)
T ss_pred             ccceEeeecchhhhhcC
Confidence            99999999999999974

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation Back     alignment and domain information
>PLN03165 chaperone protein dnaJ-related; Provisional Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN03165 chaperone protein dnaJ-related; Provisional Back     alignment and domain information
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] Back     alignment and domain information
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] Back     alignment and domain information
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation Back     alignment and domain information
>TIGR02642 phage_xxxx uncharacterized phage protein Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02642 phage_xxxx uncharacterized phage protein Back     alignment and domain information
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query428
2ctt_A104 DNAJ homolog subfamily A member 3; ZING finger, be 4e-05
2ctt_A104 DNAJ homolog subfamily A member 3; ZING finger, be 2e-04
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 6e-05
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 2e-04
1exk_A79 DNAJ protein; extended beta-hairpin, CXXCXGXG, zin 5e-04
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104 Back     alignment and structure
 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 21/91 (23%), Positives = 27/91 (29%), Gaps = 28/91 (30%)

Query: 239 MSQCFNCYGRGLIAHKDGSDTICTKCNGKGTI-----------PCATCGSRGLI---KCR 284
           M  C  C G+G           C  C G G              C  CG RG I    C 
Sbjct: 28  MDTCERCNGKG--NEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCV 85

Query: 285 KCGGSGSLLTRSFAIVRWKTLSTRKVSATSG 315
            C G+G            +    ++   +SG
Sbjct: 86  VCRGAG------------QAKQKKRSGPSSG 104
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104 Back     alignment and structure
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248 Back     alignment and structure
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248 Back     alignment and structure
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query428
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 99.74
2ctt_A104 DNAJ homolog subfamily A member 3; ZING finger, be 99.48
1exk_A79 DNAJ protein; extended beta-hairpin, CXXCXGXG, zin 99.12
1exk_A79 DNAJ protein; extended beta-hairpin, CXXCXGXG, zin 97.38
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 97.31
2ctt_A104 DNAJ homolog subfamily A member 3; ZING finger, be 97.1
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 97.08
3lcz_A53 YCZA, inhibitor of trap, regulated by T-box (Trp) 97.02
3agx_A181 DNAJ homolog subfamily B member 1; chaperone; 1.85 96.72
2bx9_A53 Anti-trap, AT, tryptophan RNA-binding attenuator p 96.32
2bx9_A53 Anti-trap, AT, tryptophan RNA-binding attenuator p 95.99
3lcz_A53 YCZA, inhibitor of trap, regulated by T-box (Trp) 95.82
3pmq_A 669 Decaheme cytochrome C MTRF; greek KEY, C type cyto 95.57
2q2g_A180 HSP40 protein, heat shock 40 kDa protein, putative 95.14
1c3g_A170 Heat shock protein 40; beta sheets, short helices, 81.98
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Back     alignment and structure
Probab=99.74  E-value=8.2e-18  Score=162.43  Aligned_cols=199  Identities=16%  Similarity=0.323  Sum_probs=132.5

Q ss_pred             CCCCCCcccceeeeeeeee---cCCcEEEEEeecCCCceeCCccccCceeecCCCCCCCCCccccCcccccCCccccccE
Q 014221          174 GPALGTWELDLRSQFPVLF---VPHQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGL  250 (428)
Q Consensus       174 gp~~g~WevDl~~~lp~~F---~~G~~~~i~vp~ss~V~~C~~C~G~G~~~C~~C~G~g~~g~~~~~~~~~C~~C~GsG~  250 (428)
                      ++.++.   |+.+.+.++|   ++|++++|++++.   +.|..|+|+|..          ++    . ..+|+.|+|+|+
T Consensus         7 ~~~~g~---d~~~~l~vslee~~~G~~k~i~~~r~---~~C~~C~G~G~~----------~g----~-~~~C~~C~G~G~   65 (248)
T 1nlt_A            7 GPQRGK---DIKHEISASLEELYKGRTAKLALNKQ---ILCKECEGRGGK----------KG----A-VKKCTSCNGQGI   65 (248)
T ss_dssp             -CCBCC---CEEEEEEECTTHHHHCEEEEEEEEEE---EECTTTTTCSBS----------TT----T-CCCCTTSSSSSC
T ss_pred             CCCCCC---CEEEEEEecHHHhcCCceEEEEeeEE---EeCCCCcCccCC----------CC----C-CccCCCCCCCcE
Confidence            345567   7777777777   6799999999998   999999999987          32    2 488999999998


Q ss_pred             EEEec--C-----ccccCCCCCCccEEeCcCCCCCCcccCCCCCCCceeEEEEEEEEEEeeeee--------eeeecCCC
Q 014221          251 IAHKD--G-----SDTICTKCNGKGTIPCATCGSRGLIKCRKCGGSGSLLTRSFAIVRWKTLST--------RKVSATSG  315 (428)
Q Consensus       251 i~~~~--G-----~~~~C~~C~G~G~~~C~tC~G~G~~~C~~C~G~G~l~~~~~l~V~~~~~v~--------~~v~a~~~  315 (428)
                      +....  |     .+.+|+.|+|+|+++      ..+++|++|+|.|.+...+.|+|+||.++.        +++.+.  
T Consensus        66 ~~~~~~~g~~~~~~~~~C~~C~G~G~~i------~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~--  137 (248)
T 1nlt_A           66 KFVTRQMGPMIQRFQTECDVCHGTGDII------DPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQA--  137 (248)
T ss_dssp             EEEEEESSSEEEEEECSCTTCSSSSSCC------CTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCC--
T ss_pred             EEEEEecCceEEEEEEcCCCCCCcCEEe------ccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCC--
Confidence            75432  2     356899999988877      447899999999999999999999996663        233221  


Q ss_pred             CCCCCCcceE--EecCcceeEecC---cEEEeeeccchhhhchhhHH--HHHhh-ccCC-CCceeeecceEEE----EEe
Q 014221          316 SASVPDEVFH--RAKGVQLCNTQA---YQCSPAFFADSFFLNKFSSE--VIAER-AHVP-PTARIICERHTIS----VVP  382 (428)
Q Consensus       316 ~~g~p~dl~~--rvkg~~lf~~e~---~~~~Pi~F~d~~~l~~~sq~--lI~eh-~~~~-~~~RIl~QR~tI~----~IP  382 (428)
                      ..+.++||++  +++.|.+|++++   ++..||+|.+-  |..+.-.  -+..+ ..+. +...|++-..+++    +||
T Consensus       138 ~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eA--llG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp  215 (248)
T 1nlt_A          138 PDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTA--IAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMP  215 (248)
T ss_dssp             TTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHH--HHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCB
T ss_pred             CCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHH--hcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCc
Confidence            2245778764  558999999877   44556765532  2221100  00111 1111 1112344444444    677


Q ss_pred             ceeEEEeecCceeEEEEEecCce
Q 014221          383 VTRVTMTQRGQSFSFYIIGNSRE  405 (428)
Q Consensus       383 VTeV~y~~~gk~~~~yVyG~e~~  405 (428)
                      ...-.  -+|++|+-|.+=+..+
T Consensus       216 ~~~~~--~~GDL~V~~~V~~P~~  236 (248)
T 1nlt_A          216 IPKYG--GYGNLIIKFTIKDPEN  236 (248)
T ss_dssp             CSSSC--SBCCEEEEEEEECCC-
T ss_pred             cCCCC--CcCCEEEEEEEECCCC
Confidence            64321  3688888887777654
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Back     alignment and structure
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Back     alignment and structure
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Back     alignment and structure
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A Back     alignment and structure
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Back     alignment and structure
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C* Back     alignment and structure
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C* Back     alignment and structure
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A Back     alignment and structure
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis} Back     alignment and structure
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Back     alignment and structure
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 428
d1m1qa_90 a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum 5e-05
d1nlta374 g.54.1.1 (A:139-212) Mitochondrial protein import 0.004
>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90 Back     information, alignment and structure

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 39.8 bits (92), Expect = 5e-05
 Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 10/71 (14%)

Query: 219 NAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIA-------HKDGSDTICTKCNGKGTI- 270
           +  C SC+ +  P      + +QC +C+G+             +     C   +      
Sbjct: 11  SGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQ 70

Query: 271 --PCATCGSRG 279
              C +C   G
Sbjct: 71  KPTCESCHDDG 81
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query428
d1exka_79 Cysteine-rich domain of the chaperone protein DnaJ 99.28
d1nlta374 Mitochondrial protein import protein mas5 (Hsp40, 98.95
d1exka_79 Cysteine-rich domain of the chaperone protein DnaJ 97.39
d1nlta374 Mitochondrial protein import protein mas5 (Hsp40, 96.99
d1m1qa_90 Flavocytochrome c3 (respiratory fumarate reductase 96.67
d1m1qa_90 Flavocytochrome c3 (respiratory fumarate reductase 93.63
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.28  E-value=4.7e-13  Score=105.85  Aligned_cols=75  Identities=29%  Similarity=0.731  Sum_probs=61.7

Q ss_pred             CcEEEEEeecCCCceeCCccccCceeecCCCCCCCCCccccCcccccCCccccccEEEEecC---ccccCCCCCCccEEe
Q 014221          195 HQETRVKVPRSETIKKCPDCVGRGNAVCPSCNANQEPEYYKEKQMSQCFNCYGRGLIAHKDG---SDTICTKCNGKGTIP  271 (428)
Q Consensus       195 G~~~~i~vp~ss~V~~C~~C~G~G~~~C~~C~G~g~~g~~~~~~~~~C~~C~GsG~i~~~~G---~~~~C~~C~G~G~~~  271 (428)
                      |++++|+|++.   +.|+.|+|+|..          +    .....+|+.|+|+|++....+   +.++|+.|+|+|+++
T Consensus         1 G~~k~i~i~~~---~~C~~C~G~G~~----------~----g~~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i   63 (79)
T d1exka_           1 GVTKEIRIPTL---EECDVCHGSGAK----------P----GTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI   63 (79)
T ss_dssp             CTTTSCCCCCE---EECGGGTTTSBC----------S----SSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC
T ss_pred             CceEEEEeeee---ccCCCCcCcccC----------C----CccceeCCCccceeEEEEecccceeeEECcccCcceeEC
Confidence            34556888888   999999999987          2    235688999999999876655   356899999999999


Q ss_pred             CcCCCCCCcccCCCCCCCceeEE
Q 014221          272 CATCGSRGLIKCRKCGGSGSLLT  294 (428)
Q Consensus       272 C~tC~G~G~~~C~~C~G~G~l~~  294 (428)
                              .++|..|+|+|++..
T Consensus        64 --------~~~C~~C~G~G~v~k   78 (79)
T d1exka_          64 --------KDPCNKCHGHGRVER   78 (79)
T ss_dssp             --------SSBCGGGTTSSEEEC
T ss_pred             --------CCCCCCCCCceEeec
Confidence                    889999999998763
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Back     information, alignment and structure
>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Back     information, alignment and structure