Citrus Sinensis ID: 014260

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
Protein Sequence
MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSPFDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNGQVIDSSKQQLSCFSDSNAVFNFCPGDHDHLHNSQRSNQVYNNDNDLWSSFTKSSSSPSSSDPLCHLSV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccEEEEEEEEcEEcccccccccccccEEEEEccccccccccHHHHcccccccccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEcccccccccccccccccHHHHHHHHHHHHHccccccccEEEHEccccccccccHHHccccccccccEEEEccccccccccccccHHHHcccEEcccccccEcccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccccccccccHHcccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHccccccccccccccccHHHcccccccccccccccEccc
Coil and Loop (DISEMBL)
mledmnlsingqsqvppgfrfhpteEELLHYYLRKKVAYEkidldvirevdlnklepwdiqekckigstpqndwyffshkdkkyptgtrtnratAAGFWKATGRDKIIYSGFRRIGLRKTLVFykgraphgqksdwIMHEYRleesnnqqqdiminiqpsnssimgessesipedgwVVCRVFRKKnyqktlesprtitstsvmdsnnkshmligsSNDAVLNQLLLYMgsgsckmekvnggsssnttimnsnddddddMRITLTANINNNNSSITELLQERFmhlprleldgpsipinstspfdqdrmlKSCYQTVDDLAltgtaeaagigcgasdttkstglnDWVALDRLVASQLNgqvidsskqqlscfsdsnavfnfcpgdhdhlhnsqrsnqvynndndlwssftksssspsssdplchlsv
Flexible Loop (DISEMBL)
mledmnlsingqsqvppgfRFHPTEEELLHYYLRKKVAYEKIDLDvirevdlnklepwdiqekckigstpqndwyffshkdkkyptgtrtnrataagfwkatgrdkiiysgfrrIGLRKTLVfykgraphgqksDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKKnyqktlesprtitstsvmdsnNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSPFDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNGQVIDSSKQQLSCFSDSNAVFNFCPGDHDHLHNSQRSNQVYNNDNDLWSSFtksssspsssdplchlsv
Low Complexity Region (SEG)
MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPtgtrtnrataagFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEESnnqqqdiminiqpsnssimgessesipeDGWVVCRVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVnggsssnttimnsnddddddmRITLTAninnnnssiTELLQERFMHLPRLELDGPSIPINSTSPFDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNGQVIDSSKQQLSCFSDSNAVFNFCPGDHDHLHNSQRSNQVYNNDNDLWssftksssspsssDPLCHLSV
Disordered region (IsUnstruct)
*******************RFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYR********************************DGWVVCRVFRKKNYQ****************************NDAVLNQLLLYMGS*******************************************ITELLQERFMHLPRL******************RMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNGQVIDSSKQQLSCFSDSNAVFNFCPGD******************************************
Disordered Region (DISOPRED)
*****************GFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQ*******************SIPEDGWVVCRVFR*****************************************************************************************************************************************************************DWVALDRLVA*************************************************DLW**************PLCHLSV
Disordered Region (DISEMBL)
MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNS**********PEDGWVVCRVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSPFDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNGQVIDSSKQQLSCFSDSNAVFNFCPGDHDHLHNSQRSNQVYNNDNDLWSS*******************
Disordered Region (DISPRO)
*************QVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEE***************************PEDGWVVCRVFRKKN**********************************LNQLLLYMGSGSCKMEKVNGGSSSNTTIMNS*******MRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSP****************************************LNDWVALDRLVASQLN*********************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSPFDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNGQVIDSSKQQLSCFSDSNAVFNFCPGDHDHLHNSQRSNQVYNNDNDLWSSFTKSSSSPSSSDPLCHLSV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	428	2.2.26 [Sep-21-2011]
Q9LPI7	358	NAC domain-containing pro	yes	no	0.808	0.966	0.510	5e-90
Q84WP6	365	NAC domain-containing pro	no	no	0.803	0.942	0.462	8e-89
Q9M274	334	NAC domain-containing pro	no	no	0.642	0.823	0.478	2e-80
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.448	0.563	0.625	1e-73
Q9MA17	371	Protein SOMBRERO OS=Arabi	no	no	0.364	0.420	0.709	3e-72
Q5Z6B6	276	NAC domain-containing pro	no	no	0.376	0.583	0.673	1e-70
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.362	0.508	0.655	1e-69
Q9FWX2	395	NAC domain-containing pro	no	no	0.366	0.397	0.640	7e-65
Q9FLJ2	336	NAC domain-containing pro	no	no	0.352	0.449	0.502	3e-46
A2YMR0	425	NAC transcription factor	N/A	no	0.399	0.402	0.466	5e-46

>sp|Q9LPI7|NAC12_ARATH NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1

 Score =  332 bits (850), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 220/431 (51%), Positives = 255/431 (59%), Gaps = 85/431 (19%)

Query: 5   MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
           +NLSINGQS+VPPGFRFHPTEEELLHYYLRKKV  +KIDLDVIREVDLNKLEPWDIQE+C
Sbjct: 6   VNLSINGQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEEC 65

Query: 65  KIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFY 124
           +IGSTPQNDWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKII S  RRIGLRKTLVFY
Sbjct: 66  RIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFY 125

Query: 125 KGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFR 184
           KGRAPHGQKSDWIMHEYRL+++       M N     + ++ E   S  E+GWVVCRVFR
Sbjct: 126 KGRAPHGQKSDWIMHEYRLDDTP------MSN---GYADVVTEDPMSYNEEGWVVCRVFR 176

Query: 185 KKNYQKTLESPRTITSTSVMD--SNNKSHMLIGSSNDAVLNQLLLYM---GSGSCKMEKV 239
           KKNYQK  + P+ IT +S+ D     K      + N   L+ +LLYM   GS  C  E  
Sbjct: 177 KKNYQKIDDCPK-ITLSSLPDDTEEEKGPTFHNTQNVTGLDHVLLYMDRTGSNICMPE-- 233

Query: 240 NGGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPIN 299
                S TT  + +D                            FM LP LE         
Sbjct: 234 -----SQTTTQHQDD--------------------------VLFMQLPSLETP------K 256

Query: 300 STSPFDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLN 359
           S SP DQ       + T   L  +   E           T+    ++W +LDRLVA QLN
Sbjct: 257 SESPVDQS------FLTPSKLDFSPVQEK---------ITERPVCSNWASLDRLVAWQLN 301

Query: 360 GQVIDSSKQQLSCFSDSNAVFNFCPGDHDHLHNSQRSNQVYNNDN--DLWSSFTKSSSSP 417
                 +     C   S   F+    + D +   QR +  +NND+  DLWSSFT+SS   
Sbjct: 302 ------NGHHNPCHRKS---FDEEEENGDTM--MQRWDLHWNNDDNVDLWSSFTESS--- 347

Query: 418 SSSDPLCHLSV 428
           SS DPL HLSV
Sbjct: 348 SSLDPLLHLSV 358

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening and lignification of sclerenchymatous fibers and secondary xylem vessels (tracheary elements). Seems to repress the secondary cell wall thickening of xylary fibers. May also regulates the secondary cell wall lignification of other tissues. Binds to and activates the promoter of MYB46.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2

 Score =  327 bits (839), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 205/443 (46%), Positives = 252/443 (56%), Gaps = 99/443 (22%)

Query: 1   MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI 60
           M + M++S+NGQSQVPPGFRFHPTEEELL YYLRKKV   +IDLDVIR+VDLNKLEPWDI
Sbjct: 2   MSKSMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDI 61

Query: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT 120
           QE CKIG+TPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYS  RRIG+RKT
Sbjct: 62  QEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKT 121

Query: 121 LVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVC 180
           LVFYKGRAPHGQKSDWIMHEYRL+++    +D+ ++      SI+GE+S+   ++GWVVC
Sbjct: 122 LVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVH---EVVSIIGEASQ---DEGWVVC 175

Query: 181 RVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVN 240
           R+F+KKN  KTL SP                                 +G  S       
Sbjct: 176 RIFKKKNLHKTLNSP---------------------------------VGGASLS----G 198

Query: 241 GGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINS 300
           GG +  TT     ++D  D  + L        S   EL  + FM LP LE          
Sbjct: 199 GGDTPKTTSSQIFNEDTLDQFLELMG-----RSCKEELNLDPFMKLPNLE---------- 243

Query: 301 TSPFDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNG 360
            SP  Q   + +C+ +  D                S+   ++ +  W ALDRLVASQLNG
Sbjct: 244 -SPNSQ--AINNCHVSSPD---------TNHNIHVSNVVDTSFVTSWAALDRLVASQLNG 291

Query: 361 QVIDSSKQQLSCFSDSNAVFNFCPGDHDHLH-NSQRS---------------NQVYNNDN 404
                +   ++  ++S+         HDHL   S RS                Q Y  + 
Sbjct: 292 ----PTSYSITAVNESHV-------GHDHLALPSVRSPYPSLNRSASYHAGLTQEYTPEM 340

Query: 405 DLWSSFTKSSSSPSSSDPLCHLS 427
           +LW++ T S S  SS  P CH+S
Sbjct: 341 ELWNTTTSSLS--SSPGPFCHVS 361

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M274|NAC66_ARATH NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1

 Score =  300 bits (767), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/357 (47%), Positives = 206/357 (57%), Gaps = 82/357 (22%)

Query: 5   MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
           MN+S+NGQSQVPPGFRFHPTEEELL YYLRKK++  KIDLDVI ++DLNKLEPWDIQE C
Sbjct: 1   MNISVNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMC 60

Query: 65  KIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFY 124
           KIG+TPQNDWYF+SHKDKKYPTGTRTNRAT  GFWKATGRDK IY+   RIG+RKTLVFY
Sbjct: 61  KIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFY 120

Query: 125 KGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPED-GWVVCRVF 183
           KGRAPHGQKSDWIMHEYRL+ES      ++I+    +  +  E+ + I  D GWVVCRVF
Sbjct: 121 KGRAPHGQKSDWIMHEYRLDES------VLIS-SCGDHDVNVETCDVIGSDEGWVVCRVF 173

Query: 184 RKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGGS 243
           +K N  K +           + S+  S +   S N+  + QLL  MG  SCK        
Sbjct: 174 KKNNLCKNM-----------ISSSPASSVKTPSFNEETIEQLLEVMGQ-SCK-------- 213

Query: 244 SSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSP 303
                                            E++ + F+ LP LE             
Sbjct: 214 --------------------------------GEIVLDPFLKLPNLEC------------ 229

Query: 304 FDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNG 360
              +    + YQ + D  +          C  S     + +  W ALDRLVASQLNG
Sbjct: 230 --HNNTTITSYQWLIDDQVNN--------CHVSKVMDPSFITSWAALDRLVASQLNG 276

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues such as tracheary elements.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  277 bits (708), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 135/216 (62%), Positives = 164/216 (75%), Gaps = 24/216 (11%)

Query: 5   MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
           M  S NG   VPPGFRFHPT+EELLHYYL+KK++Y+K +++VIREVDLNKLEPWD+QE+C
Sbjct: 1   MGSSSNGG--VPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERC 58

Query: 65  KIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFY 124
           KIGSTPQN+WYFFSHKD+KYPTG+RTNRAT AGFWKATGRDK I + +++IG+RKTLVFY
Sbjct: 59  KIGSTPQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFY 118

Query: 125 KGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFR 184
           KGRAPHGQK+DWIMHEYRLE++++ Q +      PS             EDGWVVCRVF 
Sbjct: 119 KGRAPHGQKTDWIMHEYRLEDADDPQAN------PS-------------EDGWVVCRVFM 159

Query: 185 KKNYQKTL-ESPRTITSTSV--MDSNNKSHMLIGSS 217
           KKN  K + E   +I S      D++N +H L   S
Sbjct: 160 KKNLFKVVNEGSSSINSLDQHNHDASNNNHALQARS 195

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9MA17|SMB_ARATH Protein SOMBRERO OS=Arabidopsis thaliana GN=SMB PE=1 SV=1

 Score =  272 bits (696), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 127/179 (70%), Positives = 146/179 (81%), Gaps = 23/179 (12%)

Query: 11  GQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTP 70
           GQ  VPPGFRFHPTEEELL+YYL+KKV+YE IDLDVIREVDLNKLEPW+++EKC+IGS P
Sbjct: 13  GQLSVPPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKCRIGSGP 72

Query: 71  QNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIY-SGFRRIGLRKTLVFYKGRAP 129
           QN+WYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK I+ +  ++IGLRKTLVFY GRAP
Sbjct: 73  QNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAP 132

Query: 130 HGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKKNY 188
           HGQK++WIMHEYRL++S N+ Q                      EDGWVVCRVF+KKN+
Sbjct: 133 HGQKTEWIMHEYRLDDSENEIQ----------------------EDGWVVCRVFKKKNH 169

Transcription regulator. Together with BRN1 and BRN2, regulates cellular maturation of root cap. Represses stem cell-like divisions in the root cap daughter cells, and thus promotes daughter cell fate. Inhibits expression of its positive regulator FEZ in a feedback loop for controlled switches in cell division plane. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z6B6|NAC76_ORYSJ NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2

 Score =  267 bits (682), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 124/184 (67%), Positives = 146/184 (79%), Gaps = 23/184 (12%)

Query: 10  NGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGST 69
            G   VPPGFRFHPT+EELL+YYLRKKVAYE IDLDVIRE+DLNKLEPWD++++C+IG+ 
Sbjct: 5   GGALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTG 64

Query: 70  PQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIY-SGFRRIGLRKTLVFYKGRA 128
           PQN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK I+ +   RIG+RKTLVFY GRA
Sbjct: 65  PQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRA 124

Query: 129 PHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKKNY 188
           PHG+K+DWIMHEYRL++ N       +++Q               EDGWVVCRVF KK+Y
Sbjct: 125 PHGKKTDWIMHEYRLDQDN-------VDVQ---------------EDGWVVCRVFMKKSY 162

Query: 189 QKTL 192
           Q+ L
Sbjct: 163 QRGL 166

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  264 bits (674), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 116/177 (65%), Positives = 143/177 (80%), Gaps = 22/177 (12%)

Query: 15  VPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDW 74
           VPPGFRFHPT+EELLHYYL+KK++YEK +++VI+EVDLNK+EPWD+Q++CKIGSTPQN+W
Sbjct: 8   VPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEW 67

Query: 75  YFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKS 134
           YFFSHKD+KYPTG+RTNRAT +GFWKATGRDK I + +++IG+RKTLVFYKGRAPHGQK+
Sbjct: 68  YFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 127

Query: 135 DWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKKNYQKT 191
           DWIMHEYR+E++ +                         EDGWVVCRVF+KKN  K 
Sbjct: 128 DWIMHEYRIEDTEDDPC----------------------EDGWVVCRVFKKKNLFKV 162

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score =  248 bits (633), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 114/178 (64%), Positives = 133/178 (74%), Gaps = 21/178 (11%)

Query: 9   INGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGS 68
           +N  S VPPGFRFHPT+EEL+ YYLRKKVA ++I++D I+++DL K+EPWD+QE CKIG 
Sbjct: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query: 69  TPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRA 128
             Q+DWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK IY     IG+RKTLVFYKGRA
Sbjct: 61  EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA 120

Query: 129 PHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKK 186
           P+GQKSDWIMHEYRLE   N                      +  E+GWVVCRVF+K+
Sbjct: 121 PNGQKSDWIMHEYRLETDENG---------------------TPQEEGWVVCRVFKKR 157

Transcription factor probably involved in xylem formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  186 bits (472), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 89/177 (50%), Positives = 115/177 (64%), Gaps = 26/177 (14%)

Query: 12  QSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQ 71
           Q  +PPGFRFHPT+EEL+ +YL KKV         I EVDLNK EPW++    K+G   +
Sbjct: 13  QMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMG---E 69

Query: 72  NDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHG 131
            +WYFF  +D+KYPTG RTNRAT AG+WKATG+DK IY G   +G++KTLVFY+GRAP G
Sbjct: 70  KEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKG 129

Query: 132 QKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDG---WVVCRVFRK 185
           QK++W+MHEYRLE                       S+ ++P+     WV+CRVF+K
Sbjct: 130 QKTNWVMHEYRLEGKF--------------------SAHNLPKTAKNEWVICRVFQK 166

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  185 bits (470), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 83/178 (46%), Positives = 120/178 (67%), Gaps = 7/178 (3%)

Query: 14  QVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQND 73
           ++PPGFRFHPT+EEL+ +YL+KK A   + + +I EVDL K +PW++ EK   G   + +
Sbjct: 28  ELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFG---EQE 84

Query: 74  WYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK-IIYSGFRR--IGLRKTLVFYKGRAPH 130
           WYFFS +D+KYP G R NRA  +G+WKATG DK I+ SG  R  +G++K LVFY+G+ P 
Sbjct: 85  WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPK 144

Query: 131 GQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMG-ESSESIPEDGWVVCRVFRKKN 187
           G K++WIMHEYRL ++++    +    QP      G   + S+  D WV+CR+++K N
Sbjct: 145 GVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTN 202

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	428
224115540	422	NAC domain protein, IPR003441 [Populus t	0.925	0.938	0.627	1e-138
224061479	418	NAC domain protein, IPR003441 [Populus t	0.920	0.942	0.630	1e-137
255555777	425	NAC domain-containing protein, putative	0.927	0.934	0.625	1e-137
225426558	405	PREDICTED: NAC domain-containing protein	0.911	0.962	0.647	1e-136
147790455	401	hypothetical protein VITISV_042864 [Viti	0.901	0.962	0.644	1e-134
307159058	388	NAC trascription factor 3 [Gossypium hir	0.883	0.974	0.600	1e-130
302399027	400	NAC domain class transcription factor [M	0.871	0.932	0.591	1e-129
304569878	389	NAC domain-containing protein [Gossypium	0.894	0.984	0.618	1e-129
302398997	401	NAC domain class transcription factor [M	0.866	0.925	0.599	1e-128
307159054	387	NAC trascription factor 2 [Gossypium hir	0.859	0.950	0.611	1e-128

>gi|224115540|ref|XP_002317059.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|118485140|gb|ABK94433.1| unknown [Populus trichocarpa] gi|222860124|gb|EEE97671.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|312618420|gb|ADR00330.1| wood-associated NAC domain transcription factor 1A [Populus trichocarpa]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 285/454 (62%), Positives = 325/454 (71%), Gaps = 58/454 (12%)

Query: 1   MLEDM-NLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWD 59
           M EDM NLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYE+IDLDVIREVDLNKLEPWD
Sbjct: 1   MPEDMVNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYERIDLDVIREVDLNKLEPWD 60

Query: 60  IQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRK 119
           IQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGF+RIGLRK
Sbjct: 61  IQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFKRIGLRK 120

Query: 120 TLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVV 179
           TLVFYKGRAPHGQKSDWIMHEYRL++S ++            +++     E+IPE+GWVV
Sbjct: 121 TLVFYKGRAPHGQKSDWIMHEYRLDDSTHE------------TNVSNPIGEAIPEEGWVV 168

Query: 180 CRVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKV 239
           CRVFRKKNYQKTLESP+   S+S +DS  K+H ++GS N+ VL+Q+L+YMG  +CKME  
Sbjct: 169 CRVFRKKNYQKTLESPK--GSSSSLDS--KAHQILGSGNEGVLDQILMYMGR-TCKME-- 221

Query: 240 NGGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDG-PSIPI 298
              + + + +  SN+ +   +R         +N+ I+E L ERFMHLPRLE    PSIPI
Sbjct: 222 ---NETFSNMNISNNSNSSSLRFL-------SNNCISEGLHERFMHLPRLESPTLPSIPI 271

Query: 299 NSTSPFDQDRMLKSCYQTVDDLALTGTAEAAG--IGCGASDTT---------KSTGLNDW 347
            S S FDQDR   SCY    D  LT    ++   +G G  D T         KS  LNDW
Sbjct: 272 RSPS-FDQDRSFISCYHQSYDEMLTENEPSSPNQVGNGIFDMTSSSMTDHDSKSGQLNDW 330

Query: 348 VALDRLVASQLNGQVIDSSKQQLSCFS-DSNAVFNFCPGD------HDHLHNSQRSN--- 397
           V LDRLVASQLNG  +++SK QLSCFS D NA F   P D        H H S  SN   
Sbjct: 331 VTLDRLVASQLNGHEVETSK-QLSCFSTDPNASFGLSPDDGMQLSHKQHSHGSSSSNIQA 389

Query: 398 ---QVYNNDNDLWSSFTKSSSSPSSSDPLCHLSV 428
               VY+N+NDLW S TKSSS  SSSDPLCHLSV
Sbjct: 390 NSSHVYSNENDLW-SLTKSSSPSSSSDPLCHLSV 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061479|ref|XP_002300500.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222847758|gb|EEE85305.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|312618422|gb|ADR00331.1| wood-associated NAC domain transcription factor 1B [Populus trichocarpa]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/452 (63%), Positives = 322/452 (71%), Gaps = 58/452 (12%)

Query: 1   MLEDM-NLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWD 59
           M EDM NLSINGQSQVPPGFRFHPTEEELLHYYLRKKVA EKIDLDVIREVDLNKLEPWD
Sbjct: 1   MPEDMMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVANEKIDLDVIREVDLNKLEPWD 60

Query: 60  IQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRK 119
           IQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGF+RIGLRK
Sbjct: 61  IQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFKRIGLRK 120

Query: 120 TLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVV 179
           TLVFY+GRAPHGQKSDWIMHEYRL++S N            ++++     E+IPE+GWVV
Sbjct: 121 TLVFYRGRAPHGQKSDWIMHEYRLDDSTN------------DTNVSNPIGEAIPEEGWVV 168

Query: 180 CRVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKV 239
           CRVFRKKNYQKTLESP+  +S+  +DS  K+H ++GS ND VL+Q+LLYMG  +CKME  
Sbjct: 169 CRVFRKKNYQKTLESPK--SSSCSLDS--KAHQILGSGNDGVLDQILLYMGR-TCKME-- 221

Query: 240 NGGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDG-PSIPI 298
                 N T  N N  +++     L+ N      SI++ L ERFMHLPRL+    PSIP+
Sbjct: 222 ------NETFSNMNISNNNSSLRFLSDN------SISDGLHERFMHLPRLDSPPLPSIPL 269

Query: 299 NSTSPFDQDRMLKSCYQTVDDLALTGTAEAAG--IGCGASDT--------TKSTGLNDWV 348
           +S S FDQDR  KSCY    D  LT    ++   IG G  D         +KS  LNDWV
Sbjct: 270 SSPS-FDQDRSFKSCYHQSYDEMLTENEPSSSNQIGNGTFDMISSSVIHGSKSGQLNDWV 328

Query: 349 ALDRLVASQLNGQVIDSSKQQLSCFSDS-NAVFNFCPGDH---DHLHNSQRS-------- 396
            LDRLVASQLNG   ++SK  LSCF+   NA F   P D     HL NS RS        
Sbjct: 329 TLDRLVASQLNGHEAETSK-HLSCFTTGPNASFGLSPDDDMQLSHLQNSHRSSSNIQANT 387

Query: 397 NQVYNNDNDLWSSFTKSSSSPSSSDPLCHLSV 428
           + VY N+NDLW  FTKSSS  SSSDPLCHLSV
Sbjct: 388 SHVYTNENDLW-GFTKSSSPSSSSDPLCHLSV 418

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555777|ref|XP_002518924.1| NAC domain-containing protein, putative [Ricinus communis] gi|223541911|gb|EEF43457.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/456 (62%), Positives = 330/456 (72%), Gaps = 59/456 (12%)

Query: 1   MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI 60
           M +DMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI
Sbjct: 1   MPDDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI 60

Query: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT 120
           QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT
Sbjct: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT 120

Query: 121 LVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVC 180
           LVFYKGRAPHGQKSDWIMHEYRL++S++           + S+ +G   + I E+GWVVC
Sbjct: 121 LVFYKGRAPHGQKSDWIMHEYRLDDSSHDT---------AGSNPIG---DGISEEGWVVC 168

Query: 181 RVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVN 240
           RVFRKKNYQKTLESP+   S+S MDS  +   ++GS ND VL+Q+LLYMG  +CKME   
Sbjct: 169 RVFRKKNYQKTLESPK--GSSSSMDSKTQ---ILGSGNDGVLDQILLYMGR-TCKMEN-- 220

Query: 241 GGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDG-PSIPIN 299
              S +  +  S+++ ++ +R  L+A   NN    TE L ERFMHLPRL+    PS+P++
Sbjct: 221 --ESFSHHMNLSSNNTNNSIRF-LSA---NNTGISTEGLHERFMHLPRLDSPTLPSVPLS 274

Query: 300 STSPFDQDRMLKSCYQTVDDLAL------------TGTAEAAGIG-----CGASDTTKST 342
           S S FDQ+R LKSCYQ+ D++              +      G G       A +  KS+
Sbjct: 275 SPS-FDQERNLKSCYQSYDEMLSSENNNEPSSTNNSNNHHHQGNGFDISSSSAQENCKSS 333

Query: 343 GLNDWVALDRLVASQLNGQVIDSSKQQLSCFSDSNAVFNFCPGDH---DHLH------NS 393
           G+NDWV  DRLVASQLNGQV   + +QLSCFSD N  F F   D     H+H      N 
Sbjct: 334 GVNDWVTFDRLVASQLNGQV--ETSKQLSCFSDPNGSFGFSTDDDMQLSHIHVQSNRSNQ 391

Query: 394 QRSNQVYN-NDNDLWSSFTKSSSSPSSSDPLCHLSV 428
             S+QVY+ N+NDLW SFTKSSS  SSSDPLCHLSV
Sbjct: 392 PNSHQVYSTNENDLW-SFTKSSSP-SSSDPLCHLSV 425

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426558|ref|XP_002279545.1| PREDICTED: NAC domain-containing protein 43-like [Vitis vinifera]

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 287/443 (64%), Positives = 328/443 (74%), Gaps = 53/443 (11%)

Query: 1   MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI 60
           M EDMNLS+NGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIR+VDLNKLEPWDI
Sbjct: 1   MSEDMNLSVNGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIRDVDLNKLEPWDI 60

Query: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT 120
           QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK+IYS FRRIG+RKT
Sbjct: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSSFRRIGMRKT 120

Query: 121 LVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVC 180
           LVFYKGRAPHGQKSDWIMHEYRLEE N    D M       S+ +G   ES+PEDGWVVC
Sbjct: 121 LVFYKGRAPHGQKSDWIMHEYRLEE-NTPVHDTMA------SNSLG---ESMPEDGWVVC 170

Query: 181 RVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVN 240
           RVFRKKNYQKTLESP++ +++  MDS  +   ++ SSND VL+Q+L YMG  +CK E   
Sbjct: 171 RVFRKKNYQKTLESPKSTSNS--MDSRTQ---MLNSSNDGVLDQILSYMGR-TCKQE--- 221

Query: 241 GGSSSNTTIMNSN-DDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDG-PSIPI 298
                N  I N N  D ++ MR      +N NN+ I+E LQERFMHLPRLE    PS+P 
Sbjct: 222 -----NEAISNVNFSDSNNTMRF-----LNQNNTGISEGLQERFMHLPRLESPTLPSLP- 270

Query: 299 NSTSPFDQDRMLK-SCYQTVDDLALTG---TAEAAGIGCGASDT-TKSTGLNDWVALDRL 353
           N++S FDQ+R    +C Q++D++ L G   ++E  G GC  +       GLNDWVA DRL
Sbjct: 271 NNSSHFDQERCFNIACLQSIDEM-LRGSEPSSENQGSGCNTTPVHDPKAGLNDWVAFDRL 329

Query: 354 VASQLNGQVIDSSKQQLSCFS-DSNAVFNFCPGDHD----HLHNSQRSN---QVYNNDND 405
           VASQLNGQV     +QLSCFS D N  F   P DHD    HL +S R N   Q YN++ D
Sbjct: 330 VASQLNGQV---DTKQLSCFSTDPNMGFCLSP-DHDVELSHLRSS-RPNPNPQNYNSEMD 384

Query: 406 LWSSFTKSSSSPSSSDPLCHLSV 428
           LW +FT+SSSS SSSDPL HLSV
Sbjct: 385 LW-NFTRSSSS-SSSDPLGHLSV 405

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790455|emb|CAN76671.1| hypothetical protein VITISV_042864 [Vitis vinifera]

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 283/439 (64%), Positives = 324/439 (73%), Gaps = 53/439 (12%)

Query: 5   MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
           MNLS+NGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIR+VDLNKLEPWDIQEKC
Sbjct: 1   MNLSVNGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIRDVDLNKLEPWDIQEKC 60

Query: 65  KIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFY 124
           KIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK+IYS FRRIG+RKTLVFY
Sbjct: 61  KIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSSFRRIGMRKTLVFY 120

Query: 125 KGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFR 184
           KGRAPHGQKSDWIMHEYRLEE N    D M       S+ +G   ES+PEDGWVVCRVFR
Sbjct: 121 KGRAPHGQKSDWIMHEYRLEE-NTPVHDTMA------SNSLG---ESMPEDGWVVCRVFR 170

Query: 185 KKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGGSS 244
           KKNYQKTLESP++ +++  MDS  +   ++ S ND VL+Q+L YMG  +CK E       
Sbjct: 171 KKNYQKTLESPKSTSNS--MDSRTQ---MLNSXNDGVLDQILSYMGR-TCKQE------- 217

Query: 245 SNTTIMNSN-DDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDG-PSIPINSTS 302
            N  I N N  D ++ MR      +N NN+ I+E LQERFMHLPRLE    PS+P N++S
Sbjct: 218 -NEAISNVNFSDSNNTMRF-----LNQNNTGISEGLQERFMHLPRLESPTLPSLP-NNSS 270

Query: 303 PFDQDRMLK-SCYQTVDDLALTG---TAEAAGIGCGASDT-TKSTGLNDWVALDRLVASQ 357
            FDQ+R    +C Q++D++ L G   ++E  G GC  +       GLNDWVA DRLVASQ
Sbjct: 271 HFDQERCFNIACLQSIDEM-LRGSEPSSENQGSGCNTTPVHDPKXGLNDWVAFDRLVASQ 329

Query: 358 LNGQVIDSSKQQLSCFS-DSNAVFNFCPGDHD----HLHNSQRSN---QVYNNDNDLWSS 409
           LNGQV     +QLSCFS D N  F   P DHD    HL +S R N   Q YN++ DLW +
Sbjct: 330 LNGQV---DTKQLSCFSTDPNMGFCLSP-DHDVELSHLRSS-RPNPNPQNYNSEMDLW-N 383

Query: 410 FTKSSSSPSSSDPLCHLSV 428
           FT+SSSS SSSDPL HLSV
Sbjct: 384 FTRSSSS-SSSDPLGHLSV 401

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307159058|gb|ADN39415.1| NAC trascription factor 3 [Gossypium hirsutum]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/438 (60%), Positives = 311/438 (71%), Gaps = 60/438 (13%)

Query: 1   MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI 60
           M EDMNLSINGQ +VPPGFRFHPTEEELLHYYLRKKVA++KIDLDVIREVDLNKLEPW+I
Sbjct: 1   MSEDMNLSINGQFRVPPGFRFHPTEEELLHYYLRKKVAFQKIDLDVIREVDLNKLEPWEI 60

Query: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT 120
           QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSG +RIGLRKT
Sbjct: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGLKRIGLRKT 120

Query: 121 LVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVC 180
           LVFYKGRAPHGQKSDWIMHEYRL+ ++    D       + S+ +G   +S+PE+GWVVC
Sbjct: 121 LVFYKGRAPHGQKSDWIMHEYRLDHNSTSTHD------ATASNGIG---DSVPEEGWVVC 171

Query: 181 RVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVN 240
           RVFRKKNYQKTLESP++ +S++ +DS  K   ++GS ND VL+Q+L +MG   CKME   
Sbjct: 172 RVFRKKNYQKTLESPKS-SSSTCLDSKGK---MLGSCNDGVLDQILFHMGRTCCKME--- 224

Query: 241 GGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINS 300
            GS SN  +                 +I N N+ +     ERFMHLPRLE         S
Sbjct: 225 NGSLSNNNV-----------------DIPNTNNGV----HERFMHLPRLE---------S 254

Query: 301 TSPFDQDR--MLKSCYQTVDDLALTGTAEAAGIGCGASDTTKS-TGLNDWVALDRLVASQ 357
            + FDQDR  +   CY ++DD+ LT T  ++    G +   +S  G+NDWV LDRLVASQ
Sbjct: 255 PTLFDQDRSFIKPCCYHSIDDM-LTETEPSSINQRGTAGVCESNNGVNDWVTLDRLVASQ 313

Query: 358 LNGQVIDSSKQQLSCFSDSNAVFNFCPGD-----HDHLHNSQRSNQVYNNDNDLWSSFTK 412
           LNGQ    + +QL CF+D NA F  C  D     H +L  S +++ VY ++NDLW S TK
Sbjct: 314 LNGQ--QETSKQLWCFNDPNAAFRLCHDDDVQLSHLNLLRSNQNSNVYRDENDLW-SLTK 370

Query: 413 --SSSSPSSSDPLCHLSV 428
             S S  SSSDPLCHLSV
Sbjct: 371 SSSPSPSSSSDPLCHLSV 388

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399027|gb|ADL36808.1| NAC domain class transcription factor [Malus x domestica]

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/450 (59%), Positives = 306/450 (68%), Gaps = 77/450 (17%)

Query: 3   EDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQE 62
           + M+LSINGQSQVPPGFRFHPTEEELLHYYLRKKVA+E+IDLDVIREVDLNKLEPWDIQE
Sbjct: 4   DQMSLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAFERIDLDVIREVDLNKLEPWDIQE 63

Query: 63  KCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLV 122
           KCKIGSTPQNDWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKIIYSGF+RIGLRKTLV
Sbjct: 64  KCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKIIYSGFKRIGLRKTLV 123

Query: 123 FYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRV 182
           FYKGRAPHGQKSDWIMHEYRL+ESN  +  +        SS MG   ES+ E+GWVVCRV
Sbjct: 124 FYKGRAPHGQKSDWIMHEYRLDESNTHETTV--------SSSMG---ESMTEEGWVVCRV 172

Query: 183 FRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGG 242
           F+KKNYQK LESP+   S S+  SNN+ H   GS ND VL+Q+L+YMG  +CK+E     
Sbjct: 173 FKKKNYQKALESPK--ASFSMDSSNNQMH---GSRNDGVLDQILMYMGRTTCKLE----- 222

Query: 243 SSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTS 302
                                     N++ S     + ERFMHLPRLE   P++P   T 
Sbjct: 223 --------------------------NHDQSLTMNNISERFMHLPRLE--SPTLPNLPT- 253

Query: 303 PFDQDRMLKSCYQTVDDLAL---TGTAEAAGIGCGASDTT-----KSTGLNDWVALDRLV 354
            FDQ+R  K+CY  +DD+ +     +      GC  +D         T LNDW  LDRLV
Sbjct: 254 -FDQERSFKACYSAIDDMFIETEPSSTNQPSNGCHNNDLVDDHEYPKTRLNDWATLDRLV 312

Query: 355 AS---QLNGQVIDSSKQQLSCFSDSNAVFNFCPGDHD----------HLHNSQRSN---Q 398
           AS   QLNGQ  ++ K  LSCF D N  F   P  +D          +L  S+ S+   +
Sbjct: 313 ASQLGQLNGQDQETPK-HLSCFGDPNMAFCSSPHPNDQDNDVQLSYPYLRTSRSSDHQSE 371

Query: 399 VYNNDNDLWSSFTKSSSSPSSSDPLCHLSV 428
           VYNN+NDLW +FTKSSSSPSSSDPLCHLSV
Sbjct: 372 VYNNENDLW-NFTKSSSSPSSSDPLCHLSV 400

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|304569878|gb|ADM45312.1| NAC domain-containing protein [Gossypium hirsutum] gi|307752651|gb|ADN39414.1| NAC trascription factor 1 [Gossypium hirsutum]

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/430 (61%), Positives = 307/430 (71%), Gaps = 47/430 (10%)

Query: 5   MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
           MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVI+EVDLNKLEPWDIQEKC
Sbjct: 1   MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIQEVDLNKLEPWDIQEKC 60

Query: 65  KIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFY 124
           +IGSTPQN+WYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFY
Sbjct: 61  RIGSTPQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFY 120

Query: 125 KGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFR 184
           KGRAPHGQKSDWIMHEYRL++          N    +S+      +S+ EDGWVVCRVFR
Sbjct: 121 KGRAPHGQKSDWIMHEYRLDD----------NTTTHDSNGSNPIGDSVTEDGWVVCRVFR 170

Query: 185 KKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGGSS 244
           KKNY KTLESP++ +S++  D   K+HML    ND VL+Q+L YMG  +CKME  +  + 
Sbjct: 171 KKNYLKTLESPKSNSSSTGHDL--KTHMLSSGGNDGVLDQILHYMGR-TCKMESDSLNNI 227

Query: 245 SNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSPF 304
           +N  I     D++  M +     IN+          ERFMHLPRLE   P++P       
Sbjct: 228 NNIPI----PDNNPRMLVGNNGGINDGFHD-----HERFMHLPRLE--SPTLP------- 269

Query: 305 DQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNGQVID 364
                   CYQ+++D+ LT T    G   G  +     G+NDWV LD+LVASQL+GQV  
Sbjct: 270 ------SLCYQSIEDM-LTETEHRGGCCGGGGNNETKNGVNDWVTLDQLVASQLSGQV-- 320

Query: 365 SSKQQLSCFSDSNAVFNFCPGD-----HDHLHNSQRSNQVY-NNDNDLWSSFTKSSSSPS 418
            + +QLSCFSD NAVF+ C  D     H +L  S +S+QVY NNDNDLW S TKSS SP 
Sbjct: 321 ETSKQLSCFSDPNAVFSLCHDDGIQLSHLNLQRSNQSSQVYSNNDNDLW-SLTKSSFSPF 379

Query: 419 SSDPLCHLSV 428
           SSDPLCHLSV
Sbjct: 380 SSDPLCHLSV 389

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398997|gb|ADL36793.1| NAC domain class transcription factor [Malus x domestica]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/449 (59%), Positives = 305/449 (67%), Gaps = 78/449 (17%)

Query: 5   MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
           M+LSINGQSQVPPGFRFHPTEEELLHYYLRKKVA+E+IDLDVIREVDLNKLEPWDIQEKC
Sbjct: 6   MSLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAFERIDLDVIREVDLNKLEPWDIQEKC 65

Query: 65  KIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFY 124
           KIGSTPQNDWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKIIYSGF+RIGLRKTLVFY
Sbjct: 66  KIGSTPQNDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKIIYSGFKRIGLRKTLVFY 125

Query: 125 KGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFR 184
           KGRAPHGQKSDWIMHEYRLEESN+     +       SS MG   ES+ E+GWVVCRVF+
Sbjct: 126 KGRAPHGQKSDWIMHEYRLEESNSTHDTTV-------SSSMG---ESMTEEGWVVCRVFK 175

Query: 185 KKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVNGGSS 244
           KKNYQK LESP+   S S+  SNN+ H   GS ND VL+Q+L+YMG  +CK+E       
Sbjct: 176 KKNYQKALESPK--ASFSMDSSNNQIH---GSRNDGVLDQILMYMGR-TCKLE------- 222

Query: 245 SNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSPF 304
                       + D  +T+    NN        + ERFMHLPRLE   P++P  +   F
Sbjct: 223 ------------NHDEPLTM----NN--------ISERFMHLPRLE--SPTLP--NLPAF 254

Query: 305 DQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTK--------STGLNDWVALDRLVAS 356
           DQDR  K+CYQ +DD+ +     +        D  +           +NDWV LDRLVAS
Sbjct: 255 DQDRSFKACYQAIDDMFIETEPPSTNQQSNGCDNNELVDDHEDPKRRVNDWVTLDRLVAS 314

Query: 357 ---QLNGQVIDSSKQQLSCFSDSNAVFNFCP---GDHDH--------LHNSQRSNQ---V 399
              QLNGQ   + K  LSCF D N  F   P    DHDH        L  S  S+    V
Sbjct: 315 QLGQLNGQDQVTPK-HLSCFGDPNMAFCSSPPPRNDHDHDVQLSYPYLRTSSSSHHQSDV 373

Query: 400 YNNDNDLWSSFTKSSSSPSSSDPLCHLSV 428
           YNN+NDLW +FTKSSSSPSS+DPLCHLSV
Sbjct: 374 YNNENDLW-NFTKSSSSPSSTDPLCHLSV 401

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307159054|gb|ADN39413.1| NAC trascription factor 2 [Gossypium hirsutum]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/414 (61%), Positives = 292/414 (70%), Gaps = 46/414 (11%)

Query: 1   MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI 60
           M EDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVI+EVDLNKLEPWDI
Sbjct: 1   MSEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIQEVDLNKLEPWDI 60

Query: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT 120
           QEKC+IGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT
Sbjct: 61  QEKCRIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT 120

Query: 121 LVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVC 180
           LVFYKGRAPHGQKSDWIMHEYRL++          N    +S+      +S+ EDGWVVC
Sbjct: 121 LVFYKGRAPHGQKSDWIMHEYRLDD----------NTTTHDSNGSNPIGDSVTEDGWVVC 170

Query: 181 RVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSSNDAVLNQLLLYMGSGSCKMEKVN 240
           RVFRKKNY KTLESP++ +S++  D   K+HML    ND VL+Q+L YMG  +CKME   
Sbjct: 171 RVFRKKNYLKTLESPKSNSSSTGHDL--KTHMLSSGGNDGVLDQILHYMGR-TCKME--- 224

Query: 241 GGSSSNTTIMNSNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINS 300
               S++    +N    ++    L  N    N    +   ERFMHLPRLE   P++P   
Sbjct: 225 ----SDSLNNINNMPIPNNNPRMLVGNNAGTNDGFHD--HERFMHLPRLE--SPTLP--- 273

Query: 301 TSPFDQDRMLKSCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWVALDRLVASQLNG 360
                       CYQ+++D+ LT T    G   G  +     G+NDWV LD+LVASQL+G
Sbjct: 274 ----------SLCYQSIEDM-LTETEHQGGGCGGGGNNETKNGVNDWVTLDQLVASQLSG 322

Query: 361 QVIDSSKQQLSCFSDSNAVFNFCPGD-----HDHLHNSQRSNQVY-NNDNDLWS 408
           QV   + +QLSCFSD NAVF+ C  D     H +L  S +S+QVY NNDNDLWS
Sbjct: 323 QV--ETSKQLSCFSDPNAVFSLCHDDGIQLSHLNLQRSNQSSQVYSNNDNDLWS 374

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	428
TAIR|locus:2035604	358	NAC012 "NAC domain containing	0.521	0.622	0.621	5.2e-77
TAIR|locus:2044360	365	NST1 "NAC SECONDARY WALL THICK	0.532	0.624	0.588	2.5e-75
TAIR|locus:2079562	334	NAC066 "NAC domain protein 66"	0.467	0.598	0.601	6e-70
TAIR|locus:2122804	341	NAC070 "NAC domain containing	0.327	0.410	0.704	2.5e-68
TAIR|locus:2019833	371	SMB "SOMBRERO" [Arabidopsis th	0.317	0.366	0.729	1.3e-63
TAIR|locus:2122219	377	NAC076 "NAC domain containing	0.320	0.363	0.664	1.3e-61
TAIR|locus:2196641	305	NAC015 "NAC domain containing	0.320	0.449	0.690	1.6e-61
UNIPROTKB|Q5Z6B6	276	NAC76 "NAC domain-containing p	0.315	0.489	0.705	4.8e-60
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.317	0.344	0.676	8.4e-59
TAIR|locus:2026232	394	ANAC026 "Arabidopsis NAC domai	0.322	0.350	0.673	8.4e-59

TAIR|locus:2035604 NAC012 "NAC domain containing protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 724 (259.9 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
 Identities = 148/238 (62%), Positives = 164/238 (68%)

Query:     5 MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
             +NLSINGQS+VPPGFRFHPTEEELLHYYLRKKV  +KIDLDVIREVDLNKLEPWDIQE+C
Sbjct:     6 VNLSINGQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEEC 65

Query:    65 KIGSTPQNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFY 124
             +IGSTPQNDWYFFSHKDKKYP            FWKATGRDKII S  RRIGLRKTLVFY
Sbjct:    66 RIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFY 125

Query:   125 KGRAPHGQKSDWIMHEYRLEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGWVVCRVFR 184
             KGRAPHGQKSDWIMHEYRL+++                            +GWVVCRVFR
Sbjct:   126 KGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNE---------EGWVVCRVFR 176

Query:   185 KKNYQKTLESPRTITSTSVMDSNN--KSHMLIGSSNDAVLNQLLLYM---GSGSCKME 237
             KKNYQK  + P+ IT +S+ D     K      + N   L+ +LLYM   GS  C  E
Sbjct:   177 KKNYQKIDDCPK-ITLSSLPDDTEEEKGPTFHNTQNVTGLDHVLLYMDRTGSNICMPE 233

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IGI;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0010047 "fruit dehiscence" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2044360 NST1 "NAC SECONDARY WALL THICKENING PROMOTING FACTOR1" [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
 Identities = 140/238 (58%), Positives = 159/238 (66%)

Query:     1 MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI 60
             M + M++S+NGQSQVPPGFRFHPTEEELL YYLRKKV   +IDLDVIR+VDLNKLEPWDI
Sbjct:     2 MSKSMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDI 61

Query:    61 QEKCKIGSTPQNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKT 120
             QE CKIG+TPQNDWYFFSHKDKKYP            FWKATGRDKIIYS  RRIG+RKT
Sbjct:    62 QEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKT 121

Query:   121 LVFYKGRAPHGQKSDWIMHEYRLEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGWVVC 180
             LVFYKGRAPHGQKSDWIMHEYRL+++                            +GWVVC
Sbjct:   122 LVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQD------EGWVVC 175

Query:   181 RVFRKKNYQKTLESPRTITSTSVMDSNNKSHMLIGSS-NDAVLNQLLLYMGSGSCKME 237
             R+F+KKN  KTL SP  +   S+    +          N+  L+Q L  MG  SCK E
Sbjct:   176 RIFKKKNLHKTLNSP--VGGASLSGGGDTPKTTSSQIFNEDTLDQFLELMGR-SCKEE 230

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IGI;IMP

GO:0009901 "anther dehiscence" evidence=IGI

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0010047 "fruit dehiscence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2079562 NAC066 "NAC domain protein 66" [Arabidopsis thaliana (taxid:3702)]

 Score = 653 (234.9 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
 Identities = 124/206 (60%), Positives = 141/206 (68%)

Query:     5 MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
             MN+S+NGQSQVPPGFRFHPTEEELL YYLRKK++  KIDLDVI ++DLNKLEPWDIQE C
Sbjct:     1 MNISVNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMC 60

Query:    65 KIGSTPQNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFY 124
             KIG+TPQNDWYF+SHKDKKYP            FWKATGRDK IY+   RIG+RKTLVFY
Sbjct:    61 KIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFY 120

Query:   125 KGRAPHGQKSDWIMHEYRLEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGWVVCRVFR 184
             KGRAPHGQKSDWIMHEYRL+ES                            +GWVVCRVF+
Sbjct:   121 KGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSD------EGWVVCRVFK 174

Query:   185 KKNYQKTLESPRTITSTSVMDSNNKS 210
             K N  K + S    +S      N ++
Sbjct:   175 KNNLCKNMISSSPASSVKTPSFNEET 200

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0009901 "anther dehiscence" evidence=IGI

GO:0016020 "membrane" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2122804 NAC070 "NAC domain containing protein 70" [Arabidopsis thaliana (taxid:3702)]

 Score = 583 (210.3 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
 Identities = 100/142 (70%), Positives = 120/142 (84%)

Query:     5 MNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKC 64
             M  S NG   VPPGFRFHPT+EELLHYYL+KK++Y+K +++VIREVDLNKLEPWD+QE+C
Sbjct:     1 MGSSSNGG--VPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERC 58

Query:    65 KIGSTPQNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFY 124
             KIGSTPQN+WYFFSHKD+KYP            FWKATGRDK I + +++IG+RKTLVFY
Sbjct:    59 KIGSTPQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFY 118

Query:   125 KGRAPHGQKSDWIMHEYRLEES 146
             KGRAPHGQK+DWIMHEYRLE++
Sbjct:   119 KGRAPHGQKTDWIMHEYRLEDA 140

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2019833 SMB "SOMBRERO" [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 1.3e-63, Sum P(3) = 1.3e-63
 Identities = 100/137 (72%), Positives = 116/137 (84%)

Query:    11 GQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTP 70
             GQ  VPPGFRFHPTEEELL+YYL+KKV+YE IDLDVIREVDLNKLEPW+++EKC+IGS P
Sbjct:    13 GQLSVPPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKCRIGSGP 72

Query:    71 QNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIY-SGFRRIGLRKTLVFYKGRAP 129
             QN+WYFFSHKDKKYP            FWKATGRDK I+ +  ++IGLRKTLVFY GRAP
Sbjct:    73 QNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAP 132

Query:   130 HGQKSDWIMHEYRLEES 146
             HGQK++WIMHEYRL++S
Sbjct:   133 HGQKTEWIMHEYRLDDS 149

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010455 "positive regulation of cell fate commitment" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0003002 "regionalization" evidence=IMP

TAIR|locus:2122219 NAC076 "NAC domain containing protein 76" [Arabidopsis thaliana (taxid:3702)]

 Score = 526 (190.2 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
 Identities = 91/137 (66%), Positives = 109/137 (79%)

Query:     8 SINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIG 67
             S++    VPPGFRFHPT+EEL+ YYLRKKVA +KIDLDVIR++DL ++EPWD+QE C+IG
Sbjct:     3 SVDQSCSVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIG 62

Query:    68 STPQNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFYKGR 127
                +N+WYFFSHKDKKYP            FWKATGRDK +Y   + IG+RKTLVFYKGR
Sbjct:    63 YEERNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKSKLIGMRKTLVFYKGR 122

Query:   128 APHGQKSDWIMHEYRLE 144
             AP+GQK+DWIMHEYRLE
Sbjct:   123 APNGQKTDWIMHEYRLE 139

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

TAIR|locus:2196641 NAC015 "NAC domain containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
 Identities = 96/139 (69%), Positives = 119/139 (85%)

Query:     8 SINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIG 67
             S NG   VPPGFRFHPT+EELLHYYL+KK++YEK +++VI+EVDLNK+EPWD+Q++CKIG
Sbjct:     3 SSNGG--VPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIG 60

Query:    68 STPQNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFYKGR 127
             STPQN+WYFFSHKD+KYP            FWKATGRDK I + +++IG+RKTLVFYKGR
Sbjct:    61 STPQNEWYFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGR 120

Query:   128 APHGQKSDWIMHEYRLEES 146
             APHGQK+DWIMHEYR+E++
Sbjct:   121 APHGQKTDWIMHEYRIEDT 139

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

UNIPROTKB|Q5Z6B6 NAC76 "NAC domain-containing protein 76" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 551 (199.0 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
 Identities = 96/136 (70%), Positives = 113/136 (83%)

Query:    11 GQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTP 70
             G   VPPGFRFHPT+EELL+YYLRKKVAYE IDLDVIRE+DLNKLEPWD++++C+IG+ P
Sbjct:     6 GALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGP 65

Query:    71 QNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIY-SGFRRIGLRKTLVFYKGRAP 129
             QN+WYFFSHKDKKYP            FWKATGRDK I+ +   RIG+RKTLVFY GRAP
Sbjct:    66 QNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAP 125

Query:   130 HGQKSDWIMHEYRLEE 145
             HG+K+DWIMHEYRL++
Sbjct:   126 HGKKTDWIMHEYRLDQ 141

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=ISS

GO:0048829 "root cap development" evidence=ISS

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
 Identities = 92/136 (67%), Positives = 107/136 (78%)

Query:     9 INGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGS 68
             +N  S VPPGFRFHPT+EEL+ YYLRKKVA ++I++D I+++DL K+EPWD+QE CKIG 
Sbjct:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query:    69 TPQNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFYKGRA 128
               Q+DWYFFSHKDKKYP            FWKATGRDK IY     IG+RKTLVFYKGRA
Sbjct:    61 EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA 120

Query:   129 PHGQKSDWIMHEYRLE 144
             P+GQKSDWIMHEYRLE
Sbjct:   121 PNGQKSDWIMHEYRLE 136

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2026232 ANAC026 "Arabidopsis NAC domain containing protein 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 518 (187.4 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
 Identities = 93/138 (67%), Positives = 110/138 (79%)

Query:     9 INGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGS 68
             +N  SQVPPGFRFHPT+EEL+ YYLRKKVA ++I++D+I++VDL K+EP D+QE CKIG+
Sbjct:     1 MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGN 60

Query:    69 TPQNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFYKGRA 128
               Q++WYFFSHKDKKYP            FWKATGRDK IY     IG+RKTLVFYKGRA
Sbjct:    61 EEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYIRHSLIGMRKTLVFYKGRA 120

Query:   129 PHGQKSDWIMHEYRLEES 146
             P+GQKSDWIMHEYRLE S
Sbjct:   121 PNGQKSDWIMHEYRLETS 138

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LPI7	NAC12_ARATH	No assigned EC number	0.5104	0.8084	0.9664	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00000504001 SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (401 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	428
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	5e-74

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  227 bits (581), Expect = 5e-74
 Identities = 78/131 (59%), Positives = 101/131 (77%), Gaps = 4/131 (3%)

Query: 16  PPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIREVDLNKLEPWDIQEKCKIGSTPQNDW 74
           PPGFRFHPT+EEL+ YYL++KV  + + L DVI EVD+ K EPWD+ +    G     +W
Sbjct: 2   PPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGG--DREW 59

Query: 75  YFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRR-IGLRKTLVFYKGRAPHGQK 133
           YFFS +D+KYP G+RTNRAT +G+WKATG+DK + S     +G++KTLVFYKGRAP G+K
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 134 SDWIMHEYRLE 144
           +DW+MHEYRLE
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	428
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=7e-42  Score=299.92  Aligned_cols=127  Identities=52%  Similarity=1.052  Sum_probs=96.9

Q ss_pred             CCCCceecCChHHHHHHHHHHHhccCCCCC-CceeeccCCCCCCchhhhhhccCCCCCCeeEEEecCCCCCCCCCccccc
Q 014260           15 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRA   93 (428)
Q Consensus        15 LPpGfRF~PTDeELV~~YL~~Kv~g~pl~~-~~I~evDVy~~ePWdL~~~~~~gs~~e~eWYFFs~r~kK~~~G~R~nR~   93 (428)
                      |||||||+|||+|||.+||++|+.|++++. .+|+++|||.+|||+|++....   .+++||||+++++++.+|.|.+|+
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~---~~~~~yFF~~~~~~~~~~~r~~R~   77 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKG---GDEEWYFFSPRKKKYPNGGRPNRV   77 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS----SSEEEEEEE----------S-EE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccC---CCceEEEEEecccccCCccccccc
Confidence            899999999999999999999999999887 7999999999999999953222   367999999999999999999999


Q ss_pred             ccCceeeecCCCeEEec-CcEEEEEEEEEEeeeCCCCCCCCcCeEEEEEEeC
Q 014260           94 TAAGFWKATGRDKIIYS-GFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLE  144 (428)
Q Consensus        94 tg~G~WK~tG~dk~I~~-~g~~IG~KktLvFy~gr~p~g~KT~WiMhEY~L~  144 (428)
                      +++|+||.+|+++.|.. ++++||+||+|+||.++.+++.||+|+||||+|.
T Consensus        78 ~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   78 TGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             ETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             ccceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            99999999999999988 8999999999999998888899999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	428
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		3e-34
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-33
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		1e-33

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 17/177 (9%)
Query: 11  GQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTP 70
            +  +PPGFRFHPT++EL+ +YL +K A +++ + +I EVDL K +PWD+ E+   G+  
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGA-- 68
Query: 71  QNDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPH 130
             +WYFF+ +D+KYP            +WKATG DK +    R +G++K LVFY G+AP 
Sbjct: 69  -REWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPR 127
Query: 131 GQKSDWIMHEYRLEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGWVVCRVFRKKN 187
           G K+DWIMHEYRL ++                            D WV+CR++ KKN
Sbjct: 128 GVKTDWIMHEYRLADA--------------GRAAAGAKKGSLRLDDWVLCRLYNKKN 170

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 22/176 (12%)
Query: 12  QSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQ 71
           Q  +PPGFRF+PT+EEL+  YL +K A     L +I E+DL K +PW +  K   G   +
Sbjct: 17  QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---E 73
Query: 72  NDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHG 131
            +WYFFS +D+KYP            +WKATG DKII +  +R+G++K LVFY G+AP G
Sbjct: 74  KEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG 133
Query: 132 QKSDWIMHEYRLEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGWVVCRVFRKKN 187
            K++WIMHEYRL E                             D WV+CR+++K++
Sbjct: 134 TKTNWIMHEYRLIEP-------------------SRRNGSTKLDDWVLCRIYKKQS 170

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 22/176 (12%)
Query: 12  QSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQ 71
           Q  +PPGFRF+PT+EEL+  YL +K A     L +I E+DL K +PW +  K   G   +
Sbjct: 14  QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---E 70
Query: 72  NDWYFFSHKDKKYPXXXXXXXXXXXXFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHG 131
            +WYFFS +D+KYP            +WKATG DKII +  +R+G++K LVFY G+AP G
Sbjct: 71  KEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG 130
Query: 132 QKSDWIMHEYRLEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGWVVCRVFRKKN 187
            K++WIMHEYRL E                             D WV+CR+++K++
Sbjct: 131 TKTNWIMHEYRLIEP-------------------SRRNGSTKLDDWVLCRIYKKQS 167

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	428
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-99
1ut7_A	171	No apical meristem protein; transcription regulati	5e-97
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  293 bits (753), Expect = 1e-99
 Identities = 79/187 (42%), Positives = 113/187 (60%), Gaps = 17/187 (9%)

Query: 1   MLEDMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDI 60
           M          +  +PPGFRFHPT++EL+ +YL +K A +++ + +I EVDL K +PWD+
Sbjct: 1   MGMRRERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDL 60

Query: 61  QEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKT 120
            E+   G+    +WYFF+ +D+KYP G+R NRA   G+WKATG DK +    R +G++K 
Sbjct: 61  PERALFGA---REWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKA 117

Query: 121 LVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVC 180
           LVFY G+AP G K+DWIMHEYRL ++                   G    S+  D WV+C
Sbjct: 118 LVFYAGKAPRGVKTDWIMHEYRLADAGRAAA--------------GAKKGSLRLDDWVLC 163

Query: 181 RVFRKKN 187
           R++ KKN
Sbjct: 164 RLYNKKN 170

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  287 bits (736), Expect = 5e-97
 Identities = 77/181 (42%), Positives = 109/181 (60%), Gaps = 22/181 (12%)

Query: 10  NGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGST 69
             Q  +PPGFRF+PT+EEL+  YL +K A     L +I E+DL K +PW +  K   G  
Sbjct: 12  LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGE- 70

Query: 70  PQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAP 129
              +WYFFS +D+KYP G+R NR   +G+WKATG DKII +  +R+G++K LVFY G+AP
Sbjct: 71  --KEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP 128

Query: 130 HGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKKNYQ 189
            G K++WIMHEYRL E +                     + S   D WV+CR+++K++  
Sbjct: 129 KGTKTNWIMHEYRLIEPSR-------------------RNGSTKLDDWVLCRIYKKQSSA 169

Query: 190 K 190
           +
Sbjct: 170 Q 170

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 54/337 (16%), Positives = 102/337 (30%), Gaps = 77/337 (22%)

Query: 30  HYYL-----RKKVAYEKIDLDVIREVDLNKLEPWDIQEKCK-IGSTPQNDWYFFSHKDKK 83
           H+++       +  Y+ I L V  +  ++  +  D+Q+  K I S  + D +    KD  
Sbjct: 4   HHHMDFETGEHQYQYKDI-LSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDAV 61

Query: 84  YPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 143
               + T R     FW    + + +   F    LR     Y           ++M   + 
Sbjct: 62  ----SGTLRL----FWTLLSKQEEMVQKFVEEVLRIN---Y----------KFLMSPIKT 100

Query: 144 EESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKKNYQKTLESPRTITSTSV 203
           E             QPS  + M        +  +   +VF K N    +   +       
Sbjct: 101 E-----------QRQPSMMTRMYIEQR---DRLYNDNQVFAKYN----VSRLQPYLKL-- 140

Query: 204 MDSNNKSHMLIGSSNDAVLNQLLLY-M-GSG-------SCKMEKVNGGSSSNT---TIMN 251
                +  +L       VL    +  + GSG        C   KV            + N
Sbjct: 141 -----RQALLELRPAKNVL----IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191

Query: 252 SNDDDDDDMRITLTANINNNNSSITELLQERFMHLPRLELDGPSIPINSTSPFDQDRMLK 311
            N  +       +   +      I      R  H   ++L   SI         + +  +
Sbjct: 192 CNSPET------VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI-QAELRRLLKSKPYE 244

Query: 312 SCYQTVDDLALTGTAEAAGIGCGASDTTKSTGLNDWV 348
           +C   + ++       A  + C    TT+   + D++
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 7e-04
 Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 6/64 (9%)

Query: 4   DMNLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREV-DLNKLEPWDIQE 62
           D N +           R H  + EL      K   YE   L V+  V +      +++  
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP--YEN-CLLVLLNVQNAKAWNAFNLS- 265

Query: 63  KCKI 66
            CKI
Sbjct: 266 -CKI 268

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	428
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=6.1e-55  Score=402.23  Aligned_cols=162  Identities=48%  Similarity=1.001  Sum_probs=137.8

Q ss_pred             cCCCCCCCCCceecCChHHHHHHHHHHHhccCCCCCCceeeccCCCCCCchhhhhhccCCCCCCeeEEEecCCCCCCCCC
Q 014260            9 INGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGT   88 (428)
Q Consensus         9 ~ng~~~LPpGfRF~PTDeELV~~YL~~Kv~g~pl~~~~I~evDVy~~ePWdL~~~~~~gs~~e~eWYFFs~r~kK~~~G~   88 (428)
                      ..+++.|||||||+|||||||.|||++|+.|.+++..+|+++|||++|||+|++.+..+   +++||||+++++||++|.
T Consensus         9 ~~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g---~~ewYFFs~r~~ky~~g~   85 (174)
T 3ulx_A            9 AEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG---AREWYFFTPRDRKYPNGS   85 (174)
T ss_dssp             CCSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSC---SSEEEEEEECCC-----C
T ss_pred             cccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccC---CceEEEEeccccccCCCC
Confidence            45678999999999999999999999999999999999999999999999999987544   679999999999999999


Q ss_pred             cccccccCceeeecCCCeEEecCcEEEEEEEEEEeeeCCCCCCCCcCeEEEEEEeCCCCccchhhhhccCCCCCcccCCC
Q 014260           89 RTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGES  168 (428)
Q Consensus        89 R~nR~tg~G~WK~tG~dk~I~~~g~~IG~KktLvFy~gr~p~g~KT~WiMhEY~L~~~~~~~~~~~~~~~~~~~~~~g~~  168 (428)
                      |++|+|++||||++|+++.|..+|++||+||+|+||+|+++++.||+|+||||+|.+.....          ..+.    
T Consensus        86 R~nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~----------~~~~----  151 (174)
T 3ulx_A           86 RPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAA----------AGAK----  151 (174)
T ss_dssp             CSCEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC---------------------
T ss_pred             CceeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcc----------cccc----
Confidence            99999999999999999999988999999999999999999999999999999999876410          0000    


Q ss_pred             CCCCCCCceEEEEEEEecC
Q 014260          169 SESIPEDGWVVCRVFRKKN  187 (428)
Q Consensus       169 ~~~~~~~~wVLCRIykKk~  187 (428)
                      ......++|||||||+|++
T Consensus       152 ~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          152 KGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             ----CCSSEEEEEEEESCC
T ss_pred             cCCCCCCCEEEEEEEEcCC
Confidence            0224578999999999986

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=5.4e-54  Score=395.02  Aligned_cols=157  Identities=49%  Similarity=0.990  Sum_probs=132.7

Q ss_pred             CCCCCCCCCceecCChHHHHHHHHHHHhccCCCCCCceeeccCCCCCCchhhhhhccCCCCCCeeEEEecCCCCCCCCCc
Q 014260           10 NGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTR   89 (428)
Q Consensus        10 ng~~~LPpGfRF~PTDeELV~~YL~~Kv~g~pl~~~~I~evDVy~~ePWdL~~~~~~gs~~e~eWYFFs~r~kK~~~G~R   89 (428)
                      ..+..|||||||+|||||||.|||++|+.|.+++.++|+++|||.+|||+|++....+   +++||||+++++||++|.|
T Consensus        12 ~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g---~~ewyFFs~r~~k~~~g~R   88 (171)
T 1ut7_A           12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPNGSR   88 (171)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC---SSEEEEEEECCC-------
T ss_pred             ccccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcC---CccEEEEeccccccCCCCc
Confidence            3467899999999999999999999999999999999999999999999999986543   7899999999999999999


Q ss_pred             ccccccCceeeecCCCeEEecCcEEEEEEEEEEeeeCCCCCCCCcCeEEEEEEeCCCCccchhhhhccCCCCCcccCCCC
Q 014260           90 TNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESS  169 (428)
Q Consensus        90 ~nR~tg~G~WK~tG~dk~I~~~g~~IG~KktLvFy~gr~p~g~KT~WiMhEY~L~~~~~~~~~~~~~~~~~~~~~~g~~~  169 (428)
                      ++|+|++|+||++|+++.|+.++.+||+||+|+||+|+++++.||+|+||||+|.....  .                 .
T Consensus        89 ~~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~--~-----------------~  149 (171)
T 1ut7_A           89 PNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR--R-----------------N  149 (171)
T ss_dssp             CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC----------------------
T ss_pred             ccccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCcc--c-----------------c
Confidence            99999999999999999999888999999999999999999999999999999998752  0                 0


Q ss_pred             CCCCCCceEEEEEEEecCc
Q 014260          170 ESIPEDGWVVCRVFRKKNY  188 (428)
Q Consensus       170 ~~~~~~~wVLCRIykKk~~  188 (428)
                      .....++|||||||+|+..
T Consensus       150 ~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A          150 GSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             -----CCEEEEEEEECC--
T ss_pred             CcccCCCEEEEEEEEcCCC
Confidence            1245789999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	428
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	5e-65

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  203 bits (518), Expect = 5e-65
 Identities = 77/175 (44%), Positives = 109/175 (62%), Gaps = 22/175 (12%)

Query: 12  QSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQ 71
           Q  +PPGFRF+PT+EEL+  YL +K A     L +I E+DL K +PW +  K   G   +
Sbjct: 14  QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---E 70

Query: 72  NDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHG 131
            +WYFFS +D+KYP G+R NR   +G+WKATG DKII +  +R+G++K LVFY G+AP G
Sbjct: 71  KEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG 130

Query: 132 QKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMGESSESIPEDGWVVCRVFRKK 186
            K++WIMHEYRL E + +                   + S   D WV+CR+++K+
Sbjct: 131 TKTNWIMHEYRLIEPSRR-------------------NGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	428
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6e-52  Score=376.58  Aligned_cols=158  Identities=49%  Similarity=0.978  Sum_probs=131.9

Q ss_pred             cccCCCCCCCCCceecCChHHHHHHHHHHHhccCCCCCCceeeccCCCCCCchhhhhhccCCCCCCeeEEEecCCCCCCC
Q 014260            7 LSINGQSQVPPGFRFHPTEEELLHYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPT   86 (428)
Q Consensus         7 ~~~ng~~~LPpGfRF~PTDeELV~~YL~~Kv~g~pl~~~~I~evDVy~~ePWdL~~~~~~gs~~e~eWYFFs~r~kK~~~   86 (428)
                      -+...++.|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+|++....+   +++||||+++++++++
T Consensus         9 ~~~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~---~~~wyFft~~~~k~~~   85 (166)
T d1ut7a_           9 TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPN   85 (166)
T ss_dssp             ---CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC---SSEEEEEEECCC----
T ss_pred             cCccccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccC---cceEEEEeeeccccCC
Confidence            3455678999999999999999999999999999999999999999999999999875433   6789999999999999


Q ss_pred             CCcccccccCceeeecCCCeEEecCcEEEEEEEEEEeeeCCCCCCCCcCeEEEEEEeCCCCccchhhhhccCCCCCcccC
Q 014260           87 GTRTNRATAAGFWKATGRDKIIYSGFRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEESNNQQQDIMINIQPSNSSIMG  166 (428)
Q Consensus        87 G~R~nR~tg~G~WK~tG~dk~I~~~g~~IG~KktLvFy~gr~p~g~KT~WiMhEY~L~~~~~~~~~~~~~~~~~~~~~~g  166 (428)
                      |.|.+|++++|+||++|++++|.++|.+||+||+|+||+++.+++.||+|+||||+|.+....                 
T Consensus        86 g~r~~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~-----------------  148 (166)
T d1ut7a_          86 GSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR-----------------  148 (166)
T ss_dssp             ---CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-------------------
T ss_pred             CCccccccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccc-----------------
Confidence            999999999999999999999999999999999999999999999999999999999887531                 


Q ss_pred             CCCCCCCCCceEEEEEEEec
Q 014260          167 ESSESIPEDGWVVCRVFRKK  186 (428)
Q Consensus       167 ~~~~~~~~~~wVLCRIykKk  186 (428)
                        ......++|||||||+|+
T Consensus       149 --~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         149 --NGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             --------CCEEEEEEEECC
T ss_pred             --cCccccCCEEEEEEEecC
Confidence              022456799999999986