Citrus Sinensis ID: 014367
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 426 | ||||||
| 18421489 | 457 | EXS (ERD1/XPR1/SYG1) domain protein [Ara | 0.990 | 0.923 | 0.814 | 0.0 | |
| 359485581 | 472 | PREDICTED: SPX and EXS domain-containing | 0.992 | 0.896 | 0.814 | 0.0 | |
| 356568338 | 420 | PREDICTED: SPX and EXS domain-containing | 0.985 | 1.0 | 0.791 | 0.0 | |
| 356530102 | 420 | PREDICTED: SPX and EXS domain-containing | 0.985 | 1.0 | 0.793 | 0.0 | |
| 449453179 | 477 | PREDICTED: SPX and EXS domain-containing | 0.995 | 0.888 | 0.777 | 0.0 | |
| 357507169 | 430 | SPX and EXS domain-containing protein [M | 0.985 | 0.976 | 0.788 | 0.0 | |
| 357453507 | 469 | Xenotropic and polytropic retrovirus rec | 0.992 | 0.901 | 0.769 | 0.0 | |
| 388514961 | 469 | unknown [Medicago truncatula] | 0.992 | 0.901 | 0.767 | 0.0 | |
| 356543746 | 472 | PREDICTED: SPX and EXS domain-containing | 0.992 | 0.896 | 0.774 | 0.0 | |
| 356550002 | 471 | PREDICTED: SPX and EXS domain-containing | 0.988 | 0.893 | 0.766 | 0.0 |
| >gi|18421489|ref|NP_568530.1| EXS (ERD1/XPR1/SYG1) domain protein [Arabidopsis thaliana] gi|17979075|gb|AAL49805.1| unknown protein [Arabidopsis thaliana] gi|21554193|gb|AAM63272.1| unknown [Arabidopsis thaliana] gi|25055013|gb|AAN71970.1| unknown protein [Arabidopsis thaliana] gi|332006626|gb|AED94009.1| EXS (ERD1/XPR1/SYG1) domain protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/426 (81%), Positives = 387/426 (90%), Gaps = 4/426 (0%)
Query: 1 MKSASSPVHRAAILPSPIFLWRFKVMLFLIWGIGCCKIGWESVLRMGVDLRDLFLYEAFL 60
+K ++SP+H ++PSPIFLWRFKV+LFL W + CCKIGW+SV+RM +DLRDLFLYEAFL
Sbjct: 36 LKGSNSPLHITTMVPSPIFLWRFKVVLFLFWALCCCKIGWDSVMRMSIDLRDLFLYEAFL 95
Query: 61 YYNPLLLVTMMVWLWGVNLWVFSQGSANYAKIFDLDQNHLTHHEIWKCSIWMTIIVPTSM 120
YYNPLLLVTMMVWLWGVNLWVFSQGS NY+K+FDLD NHLTH E+WKCS+WMTIIVPTSM
Sbjct: 96 YYNPLLLVTMMVWLWGVNLWVFSQGSVNYSKVFDLDHNHLTHREMWKCSMWMTIIVPTSM 155
Query: 121 TAYLYLYSHGEVSLAASQPVLLYIAIAIVLIFPFDIFYLSSRYFFLRTLWRIALPLQAIT 180
TAYLYLYSHGEVSLAASQPVLLYIA A+VLIFPFDIFYLSSRYF LRTLWRIA PLQ IT
Sbjct: 156 TAYLYLYSHGEVSLAASQPVLLYIAFALVLIFPFDIFYLSSRYFLLRTLWRIAFPLQPIT 215
Query: 181 FPDFFLADILTSMAKVFSDLERSICRMVHRQVATIAWFEADSVCGSHSIAIPLVLVFPYL 240
FPDFFLADILTSM KVFSDLERS+CRMVHRQVATIAWFEAD+VCGSH IAIPLVLVFPY+
Sbjct: 216 FPDFFLADILTSMVKVFSDLERSVCRMVHRQVATIAWFEADAVCGSHQIAIPLVLVFPYI 275
Query: 241 CRLLQCLRQYKDTKEKTTLLNALKYSTAVPVIFLSALKYHVFPHKWSSVYRPLWLLSSVI 300
CRLLQCLRQYKDTKEK++LLNALKYSTAVPVIFLSALKYHV P W+S YRPLWL SSVI
Sbjct: 276 CRLLQCLRQYKDTKEKSSLLNALKYSTAVPVIFLSALKYHVMPESWTSFYRPLWLFSSVI 335
Query: 301 NSLYSFYWDVTRDWDLSGFSRIFKFNKPSFFSNLLYGRQWIYFWVIGSNLILRCTWTYKL 360
NSLYSFYWDVTRDWDLSGF++IFKF++PS SNLLYGRQW+YFWVIGSNL+LRC WTYKL
Sbjct: 336 NSLYSFYWDVTRDWDLSGFTKIFKFSRPSTISNLLYGRQWVYFWVIGSNLVLRCAWTYKL 395
Query: 361 SAHLRHNHLTVFAVAVLEMLRRFQWIFFRVESEWNKITKSSFQLPTSEMLKEDEKLKLLA 420
SAHLRHN++TVF + +EMLRRFQW+FFRVE+EWNKITKS P E+ E++KL L +
Sbjct: 396 SAHLRHNYITVFTMTAMEMLRRFQWVFFRVENEWNKITKSH---PMGEISLEEDKL-LGS 451
Query: 421 STNHDI 426
+T HD+
Sbjct: 452 TTPHDV 457
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485581|ref|XP_002274355.2| PREDICTED: SPX and EXS domain-containing protein 1-like [Vitis vinifera] gi|297739314|emb|CBI28965.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356568338|ref|XP_003552368.1| PREDICTED: SPX and EXS domain-containing protein 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356530102|ref|XP_003533623.1| PREDICTED: SPX and EXS domain-containing protein 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449453179|ref|XP_004144336.1| PREDICTED: SPX and EXS domain-containing protein 1-like [Cucumis sativus] gi|449480887|ref|XP_004156022.1| PREDICTED: SPX and EXS domain-containing protein 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357507169|ref|XP_003623873.1| SPX and EXS domain-containing protein [Medicago truncatula] gi|355498888|gb|AES80091.1| SPX and EXS domain-containing protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357453507|ref|XP_003597031.1| Xenotropic and polytropic retrovirus receptor [Medicago truncatula] gi|355486079|gb|AES67282.1| Xenotropic and polytropic retrovirus receptor [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388514961|gb|AFK45542.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356543746|ref|XP_003540321.1| PREDICTED: SPX and EXS domain-containing protein 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356550002|ref|XP_003543379.1| PREDICTED: SPX and EXS domain-containing protein 1-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 426 | ||||||
| TAIR|locus:2177251 | 457 | AT5G35730 "AT5G35730" [Arabido | 0.938 | 0.875 | 0.82 | 1.1e-190 | |
| DICTYBASE|DDB_G0271664 | 923 | DDB_G0271664 "SPX/EXS domain-c | 0.732 | 0.338 | 0.342 | 3.6e-40 | |
| DICTYBASE|DDB_G0285957 | 919 | xpr1 "SPX/EXS domain-containin | 0.859 | 0.398 | 0.301 | 2.9e-37 | |
| DICTYBASE|DDB_G0290647 | 927 | DDB_G0290647 "SPX/EXS domain-c | 0.793 | 0.364 | 0.279 | 1.7e-36 | |
| FB|FBgn0035649 | 671 | CG10483 [Drosophila melanogast | 0.776 | 0.493 | 0.300 | 2.5e-35 | |
| FB|FBgn0030890 | 674 | CG7536 [Drosophila melanogaste | 0.755 | 0.477 | 0.301 | 5.4e-35 | |
| ZFIN|ZDB-GENE-060503-362 | 692 | xpr1 "xenotropic and polytropi | 0.765 | 0.471 | 0.301 | 1.9e-32 | |
| UNIPROTKB|G4MSE3 | 417 | MGG_11390 "Uncharacterized pro | 0.492 | 0.503 | 0.388 | 4.3e-32 | |
| ZFIN|ZDB-GENE-060503-266 | 693 | si:dkey-60b12.7 "si:dkey-60b12 | 0.765 | 0.470 | 0.289 | 1.9e-31 | |
| UNIPROTKB|Q6K991 | 815 | PHO1-2 "Phosphate transporter | 0.769 | 0.402 | 0.295 | 6.1e-31 |
| TAIR|locus:2177251 AT5G35730 "AT5G35730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1848 (655.6 bits), Expect = 1.1e-190, P = 1.1e-190
Identities = 328/400 (82%), Positives = 361/400 (90%)
Query: 1 MKSASSPVHRAAILPSPIFLWRFKVMLFLIWGIGCCKIGWESVLRMGVDLRDLFLYEAFL 60
+K ++SP+H ++PSPIFLWRFKV+LFL W + CCKIGW+SV+RM +DLRDLFLYEAFL
Sbjct: 36 LKGSNSPLHITTMVPSPIFLWRFKVVLFLFWALCCCKIGWDSVMRMSIDLRDLFLYEAFL 95
Query: 61 YYNPLLLVTMMVWLWGVNLWVFSQGSANYAKIFDLDQNHLTHHEIWKCSIWMTIIVPTSM 120
YYNPLLLVTMMVWLWGVNLWVFSQGS NY+K+FDLD NHLTH E+WKCS+WMTIIVPTSM
Sbjct: 96 YYNPLLLVTMMVWLWGVNLWVFSQGSVNYSKVFDLDHNHLTHREMWKCSMWMTIIVPTSM 155
Query: 121 TAYLYLYSHGEVSLAASQPXXXXXXXXXXXXFPFDIFYLSSRYFFLRTLWRIALPLQAIT 180
TAYLYLYSHGEVSLAASQP FPFDIFYLSSRYF LRTLWRIA PLQ IT
Sbjct: 156 TAYLYLYSHGEVSLAASQPVLLYIAFALVLIFPFDIFYLSSRYFLLRTLWRIAFPLQPIT 215
Query: 181 FPDFFLADILTSMAKVFSDLERSICRMVHRQVATIAWFEADSVCGSHSIAIPLVLVFPYL 240
FPDFFLADILTSM KVFSDLERS+CRMVHRQVATIAWFEAD+VCGSH IAIPLVLVFPY+
Sbjct: 216 FPDFFLADILTSMVKVFSDLERSVCRMVHRQVATIAWFEADAVCGSHQIAIPLVLVFPYI 275
Query: 241 CRLLQCLRQYKDTKEKTTLLNALKYSTAVPVIFLSALKYHVFPHKWSSVYRPLWLLSSVI 300
CRLLQCLRQYKDTKEK++LLNALKYSTAVPVIFLSALKYHV P W+S YRPLWL SSVI
Sbjct: 276 CRLLQCLRQYKDTKEKSSLLNALKYSTAVPVIFLSALKYHVMPESWTSFYRPLWLFSSVI 335
Query: 301 NSLYSFYWDVTRDWDLSGFSRIFKFNKPSFFSNLLYGRQWIYFWVIGSNLILRCTWTYKL 360
NSLYSFYWDVTRDWDLSGF++IFKF++PS SNLLYGRQW+YFWVIGSNL+LRC WTYKL
Sbjct: 336 NSLYSFYWDVTRDWDLSGFTKIFKFSRPSTISNLLYGRQWVYFWVIGSNLVLRCAWTYKL 395
Query: 361 SAHLRHNHLTVFAVAVLEMLRRFQWIFFRVESEWNKITKS 400
SAHLRHN++TVF + +EMLRRFQW+FFRVE+EWNKITKS
Sbjct: 396 SAHLRHNYITVFTMTAMEMLRRFQWVFFRVENEWNKITKS 435
|
|
| DICTYBASE|DDB_G0271664 DDB_G0271664 "SPX/EXS domain-containing protein 1" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0285957 xpr1 "SPX/EXS domain-containing protein 3" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0290647 DDB_G0290647 "SPX/EXS domain-containing protein 5" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| FB|FBgn0035649 CG10483 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030890 CG7536 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-060503-362 xpr1 "xenotropic and polytropic retrovirus receptor 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4MSE3 MGG_11390 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-060503-266 si:dkey-60b12.7 "si:dkey-60b12.7" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6K991 PHO1-2 "Phosphate transporter PHO1-2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 426 | |||
| pfam03124 | 337 | pfam03124, EXS, EXS family | 1e-92 | |
| COG5409 | 384 | COG5409, COG5409, EXS domain-containing protein [S | 4e-32 |
| >gnl|CDD|217378 pfam03124, EXS, EXS family | Back alignment and domain information |
|---|
Score = 282 bits (724), Expect = 1e-92
Identities = 139/349 (39%), Positives = 199/349 (57%), Gaps = 27/349 (7%)
Query: 58 AFLYYNPLLLVTMMVWLWGVNLWVFSQGSANYAKIFDLDQNH-LTHHEIWKCSIWMTIIV 116
F Y L+ + +WLWG+NL+V+ + NY IF+ D L+H E+ + + + T++
Sbjct: 2 LFPLYRGFFLLILGLWLWGLNLYVWKRSGINYVFIFEFDPRTSLSHRELLELASFFTVLW 61
Query: 117 PTSMTAYLYLYSHGEVSLAASQ--PVLLYIAIAIVLIFPFDIFYLSSRYFFLRTLWRIAL 174
S YL L A+ P++L + + ++L PF+IFY S R++ LRTL+RI L
Sbjct: 62 LLSFLLYLLLEHLELTKPASWVQVPLVLLLIVLLILFLPFNIFYRSGRFWLLRTLFRILL 121
Query: 175 -PLQAITFPDFFLADILTSMAKVFSDLERSICRMVHRQVATIAWFEADSVCG-SHSIAIP 232
P + F DFFLAD LTS+ KV +DLE ++C + +D+ CG S +P
Sbjct: 122 APFYPVKFRDFFLADQLTSLVKVLADLEYTVCYYFNN------GDSSDNTCGSSKVYVLP 175
Query: 233 LVLVFPYLCRLLQCLRQYKDTKEKTT-LLNALKYSTAVPVIFLSALKYHVFPHKWSSVYR 291
+V PY R LQCLR+Y+DT + L NALKYSTA+PV+ LS L YR
Sbjct: 176 IVACLPYWIRFLQCLRRYRDTGDAFPHLANALKYSTAIPVVVLSTLYRKYNTSDA---YR 232
Query: 292 PLWLLSSVINSLYSFYWDVTRDWDLSGFSRIFKFNKPSFF---SNLLYGRQWIYFWVIGS 348
LW++ S+INS+YSFYWDV DW L F+ N LLY R+W+Y++ I
Sbjct: 233 ILWIVFSIINSIYSFYWDVKMDWGL------FQKNSSKNRFLRDKLLYPRKWVYYFAIVL 286
Query: 349 NLILRCTWTYKLS---AHLRHNHLTVFAVAVLEMLRRFQWIFFRVESEW 394
+LILR W +S ++H+ L VF +A+LE++RRF W FFRVE+E
Sbjct: 287 DLILRFAWLLTVSPLQHSIQHSELGVFLLALLEIIRRFIWNFFRVENEH 335
|
We have named this region the EXS family after (ERD1, XPR1, and SYG1). This family includes C-terminus portions from the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be murine leukaemia virus (MLV) receptors (XPR1). N-terminus portions from these proteins are aligned in the SPX pfam03105 family. The previously noted similarity between SYG1 and MLV receptors over their whole sequences is thus borne out in pfam03105 and this family. While the N-termini aligned in pfam03105 are thought to be involved in signal transduction, the role of the C-terminus sequences aligned in this family is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) yeast proteins. ERD1 proteins are involved in the localisation of endogenous endoplasmic reticulum (ER) proteins. erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localisation label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles. Length = 337 |
| >gnl|CDD|227696 COG5409, COG5409, EXS domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 426 | |||
| PF03124 | 345 | EXS: EXS family; InterPro: IPR004342 The EXS domai | 100.0 | |
| KOG1162 | 617 | consensus Predicted small molecule transporter [In | 100.0 | |
| COG5409 | 384 | EXS domain-containing protein [Signal transduction | 100.0 |
| >PF03124 EXS: EXS family; InterPro: IPR004342 The EXS domain is named after ERD1/XPR1/SYG1 and proteins containing this motif include the C-terminal of the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be Murine leukemia virus (MLV) receptors (XPR1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-84 Score=657.10 Aligned_cols=331 Identities=43% Similarity=0.756 Sum_probs=291.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCCCeeeEeecCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc---
Q 014367 59 FLYYNPLLLVTMMVWLWGVNLWVFSQGSANYAKIFDLDQ-NHLTHHEIWKCSIWMTIIVPTSMTAYLYLYSHGEVSL--- 134 (426)
Q Consensus 59 ~l~y~~~~Li~l~~~l~g~nl~vw~~~~INy~~IFe~~~-~~l~~~~~~~~a~~ltii~~~s~~~~l~~~~~g~~~~--- 134 (426)
++.||+.+++.+++|+||+|+++|+++||||++|||+|+ ++++++|+++.++.+++++++++..++.....+....
T Consensus 2 ~~~~R~~~L~~l~~~l~~~nl~v~~~~~Iny~~If~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 81 (345)
T PF03124_consen 2 PPPFRGLLLLILGLWLWGINLYVWSRYRINYVFIFELDPRNSLSYRQLFELASFLTIIWLLCFLIYLASVSPSIISFANW 81 (345)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHhcCCcccCCcHHHHHhhhHHHHHHHHHHHHHHHHHHcCCcccccch
Confidence 467999999999999999999999999999999999994 6789999999999999999888877766544332211
Q ss_pred --hhhhhHHHHHHHHHHHhhcccccchhhHHHHHHHHhHhh-cCCceeccchhhhHHhhhhHHHhhcccceeEEEEeccc
Q 014367 135 --AASQPVLLYIAIAIVLIFPFDIFYLSSRYFFLRTLWRIA-LPLQAITFPDFFLADILTSMAKVFSDLERSICRMVHRQ 211 (426)
Q Consensus 135 --~~~~Pl~l~~~~~~~l~~P~~i~~~~~R~~llr~l~Ril-~pf~~V~F~DfflaDqLtSl~~~l~Dl~~~~C~y~~~~ 211 (426)
.+..|+++++++++++++|++++++++|+|++++++|++ +|+.+|+|+|||+||||||++|+++|+++++|+|.++.
T Consensus 82 ~~~~~~Pll~~~~~~~~l~~P~~~~~~~~R~~~~~~l~ril~~~~~~v~f~d~~laD~LtS~~~~l~D~~~~~c~~~~~~ 161 (345)
T PF03124_consen 82 YFVEYIPLLLLLILLLLLFFPFNIFYRSSRRWFLRTLKRILLAPFYPVRFRDFFLADQLTSLSKVLGDLEFTICYYFSGS 161 (345)
T ss_pred hhHHHhhHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHhcccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc
Confidence 236899999999999999999999999999999999998 68999999999999999999999999999999997632
Q ss_pred ccccccccCCCccCCccchh-hhHhhhhHHHHHHHHHHHhhhcCCc-chhhhHHHHhhhHHHHHHHHhhhhccCCCCccc
Q 014367 212 VATIAWFEADSVCGSHSIAI-PLVLVFPYLCRLLQCLRQYKDTKEK-TTLLNALKYSTAVPVIFLSALKYHVFPHKWSSV 289 (426)
Q Consensus 212 ~~~~~w~~~~~~c~~~~~~~-p~~~~lP~~iR~~QClRry~dt~~~-~hL~Na~KY~sa~~vi~~s~l~~~~~~~~~~~~ 289 (426)
+.++++.|++++... |+++++|++||++||+|||+||+++ +||.||+||++|+++++++++.....++.+...
T Consensus 162 -----~~~~~~~c~~~~~~~~~~~~~lP~~iR~~QClrry~~~~~~~~hL~Na~KY~~~~~v~~~~~~~~~~~~~~~~~~ 236 (345)
T PF03124_consen 162 -----FTSPSNQCGSSSWYIDPIVASLPYWIRFLQCLRRYRDTGDRFPHLFNALKYSSSIPVIILSALYRFYPSSDSSIW 236 (345)
T ss_pred -----ccCCCCcCccccHhHHhHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 225678898876654 9999999999999999999999999 999999999999999999988655443333334
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhcCCCCCcccccccCCCCcccccccCccchhHHHHhhhhHHHHHhhhhcccc----cc
Q 014367 290 YRPLWLLSSVINSLYSFYWDVTRDWDLSGFSRIFKFNKPSFFSNLLYGRQWIYFWVIGSNLILRCTWTYKLSAH----LR 365 (426)
Q Consensus 290 ~~~lWi~~~~inS~Ys~~WDv~mDWgL~~~~~~~~~~~~~LR~~l~y~~~~~YY~Aiv~n~iLRf~W~~~l~~~----~~ 365 (426)
.+.+|++++++||+||++||++|||||++.++ +.+++.||++++|++|++||+||+.|+++||+|++++++. ..
T Consensus 237 ~~~~w~~~~~i~s~Ys~~WDv~~DWgL~~~~~--~~~~~~LR~~l~~~~~~~Yy~ai~~n~ilRf~W~~~~~~~~~~~~~ 314 (345)
T PF03124_consen 237 LFILWIIFALINSLYSFYWDVKMDWGLFQPKK--KSKNWLLRRRLLYPRKWFYYFAIILNFILRFAWILTLSPPHFSHID 314 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCCcc--ccCCCCCccccccCCcchhhhHHHHHHHHHHHHHHHHHHhhcchhh
Confidence 68999999999999999999999999987542 2367889999999999999999999999999999998763 33
Q ss_pred hhhHHHHHHHHHHHHhhhcceeeeeehhhhh
Q 014367 366 HNHLTVFAVAVLEMLRRFQWIFFRVESEWNK 396 (426)
Q Consensus 366 ~~~~~~f~~a~lEI~RR~iWnffRvEnEhi~ 396 (426)
+++...++++++||+||++||||||||||+|
T Consensus 315 ~~~~~~~~~~~lEi~RR~iWnffRlE~Ehin 345 (345)
T PF03124_consen 315 NSEIFIFILAILEIFRRFIWNFFRLENEHIN 345 (345)
T ss_pred hHHHHHHHHHHHHHHHHHhhheeeeeHhhcC
Confidence 5678889999999999999999999999986
|
The N-terminal of these proteins often have an SPX domain (IPR004331 from INTERPRO) []. While the N-terminal is thought to be involved in signal transduction, the role of the C-terminal is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) S. cerevisiae proteins. ERD1 proteins are involved in the localization of endogenous endoplasmic reticulum (ER) proteins. Erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localization label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles [].; GO: 0016021 integral to membrane |
| >KOG1162 consensus Predicted small molecule transporter [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5409 EXS domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00