Citrus Sinensis ID: 014425


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-----
MRGNEPNGHRGVRRKDHVVQENGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLERKRR
cccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHHHcccccEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
mrgnepnghrgvrrkdhvvqengdtdtssgsdeldpwtawaykprtiSFLLIGACFLIwasgaldpqsdsgdvvTSVKRGIWAMIAVFLTYCLLqapstvlirphpAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFlhpdlgvelpersygadcriyvhenptsrfkNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMlpnfnecwwdSIILDILICNWFGIWAGMHtvryfdgktyewvgisrqpniiGKFKrtlgqftpaqwdkdewhpllgpwRFIQVLTLCIIFLTVELNTFFLKFclwvpprnpvIIYRLILWWLIAIPTIREYnsylqdrkpvkkvgAFCWLSLAICIIELLICIKfghglypnpmpLWLVIFWLCVGFCLIAFLIIWSYKSLERKRR
mrgnepnghrgvrrkdhvvqengdtdtssgsdeldpWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLhpdlgvelperSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLERKRR
MRGNEPNGHRGVRRKDHVVQENGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAiciielliciKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLERKRR
**********************************DPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYK*******
*****************************GSDELDPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISR******KFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLE****
************RRKDHVVQ************ELDPWTAWAYKPRTISFLLIGACFLIWASGALD*********TSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLERKRR
****************************SGSDELDPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLE****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
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oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
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MRGNEPNGHRGVRRKDHVVQENGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLERKRR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query425 2.2.26 [Sep-21-2011]
Q08D11474 Phosphatidylserine syntha yes no 0.948 0.850 0.376 5e-74
E7EY42452 Phosphatidylserine syntha yes no 0.922 0.867 0.370 2e-73
Q9Z1X2473 Phosphatidylserine syntha yes no 0.962 0.864 0.362 5e-72
Q9BVG9487 Phosphatidylserine syntha yes no 0.917 0.800 0.383 6e-72
O08888474 Phosphatidylserine syntha yes no 0.905 0.812 0.383 6e-72
B2GV22471 Phosphatidylserine syntha yes no 0.962 0.868 0.362 7e-72
E1BYA3442 Phosphatidylserine syntha yes no 0.981 0.943 0.359 6e-71
Q803C9465 Phosphatidylserine syntha no no 0.844 0.772 0.378 1e-63
Q5ZM65473 Phosphatidylserine syntha no no 0.828 0.744 0.379 1e-56
P48651473 Phosphatidylserine syntha no no 0.872 0.784 0.364 2e-56
>sp|Q08D11|PTSS2_XENTR Phosphatidylserine synthase 2 OS=Xenopus tropicalis GN=ptdss2 PE=2 SV=2 Back     alignment and function desciption
 Score =  278 bits (711), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 154/409 (37%), Positives = 229/409 (55%), Gaps = 6/409 (1%)

Query: 10  RGVRRKDHVVQENGDTDTSSGSDELDPWT-AWAYKPRTISFLLIGACFLIWASGALDPQS 68
           RG R   +     G+  +S+ S+  D  T  + ++  T++ L I  C L + +     + 
Sbjct: 28  RGNRNLGNKFSHRGELRSSTESEVFDDGTNTFFWRAHTLTVLFILTCSLGYVTLL---EE 84

Query: 69  DSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLF 128
              D   + KRGI A I VFL + + QA      RPHPA WR    ++VVY + L F+LF
Sbjct: 85  TPQDTAYNAKRGIIASILVFLCFGVTQAKDGPFSRPHPAYWRFWLCVSVVYELFLIFILF 144

Query: 129 QKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVLAHIFG 188
           Q   D RQFMKF+ P LGV LPER YG +C IY   N T  + N+++ + D FV AH  G
Sbjct: 145 QTVHDGRQFMKFIDPKLGVPLPERDYGGNCLIYDPGNKTDPYHNLWDKM-DGFVPAHFLG 203

Query: 189 WWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMH 248
           W+ K ++IR+  +  ++S+ FE +E +  H LPNF+ECWWD  I+D+L+CN FGI+ GM 
Sbjct: 204 WYIKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSECWWDHWIMDVLVCNGFGIYCGMK 263

Query: 249 TVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCII 308
           T+ +   K Y+W G+   P   GK KR   QFTP  W K EW P     R++ V  +  +
Sbjct: 264 TLEWLSMKPYKWQGLWNIPTYRGKMKRIAFQFTPYSWVKFEWKPASSLRRWLAVCGIIFV 323

Query: 309 FLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKVGAFCW 368
           FL  ELNTF+LKF LW+PP + +++ RL+ +  +    +RE   ++ D K  KK+G   W
Sbjct: 324 FLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDLKFHKKLGQQAW 383

Query: 369 LSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSY 417
           +  AI + E LI +K+       P+P ++   W+ +G  L+    +W +
Sbjct: 384 MVAAITVTEFLIVVKYDPYTITLPLPFYVTQCWI-LGIVLVLTWTVWRF 431




Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) or phosphatidylcholine (PC) is replaced by L-serine. PTDSS2 is specific for phosphatatidylethanolamine and does not act on phosphatidylcholine.
Xenopus tropicalis (taxid: 8364)
EC: 2EC: .EC: 7EC: .EC: 8EC: .EC: 2EC: 9
>sp|E7EY42|PTSS2_DANRE Phosphatidylserine synthase 2 OS=Danio rerio GN=ptdss2 PE=3 SV=1 Back     alignment and function description
>sp|Q9Z1X2|PTSS2_MOUSE Phosphatidylserine synthase 2 OS=Mus musculus GN=Ptdss2 PE=2 SV=2 Back     alignment and function description
>sp|Q9BVG9|PTSS2_HUMAN Phosphatidylserine synthase 2 OS=Homo sapiens GN=PTDSS2 PE=1 SV=1 Back     alignment and function description
>sp|O08888|PTSS2_CRIGR Phosphatidylserine synthase 2 OS=Cricetulus griseus GN=PTDSS2 PE=2 SV=1 Back     alignment and function description
>sp|B2GV22|PTSS2_RAT Phosphatidylserine synthase 2 OS=Rattus norvegicus GN=Ptdss2 PE=2 SV=1 Back     alignment and function description
>sp|E1BYA3|PTSS2_CHICK Phosphatidylserine synthase 2 OS=Gallus gallus GN=PTDSS1 PE=3 SV=1 Back     alignment and function description
>sp|Q803C9|PTSS1_DANRE Phosphatidylserine synthase 1 OS=Danio rerio GN=ptdss1 PE=2 SV=2 Back     alignment and function description
>sp|Q5ZM65|PTSS1_CHICK Phosphatidylserine synthase 1 OS=Gallus gallus GN=PTDSS1 PE=2 SV=2 Back     alignment and function description
>sp|P48651|PTSS1_HUMAN Phosphatidylserine synthase 1 OS=Homo sapiens GN=PTDSS1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query425
224099433422 predicted protein [Populus trichocarpa] 0.988 0.995 0.869 0.0
225424118426 PREDICTED: phosphatidylserine synthase 2 0.990 0.988 0.882 0.0
224111574423 predicted protein [Populus trichocarpa] 0.988 0.992 0.874 0.0
356536262426 PREDICTED: phosphatidylserine synthase 2 0.988 0.985 0.849 0.0
356575602426 PREDICTED: phosphatidylserine synthase 2 0.988 0.985 0.844 0.0
449435204426 PREDICTED: phosphatidylserine synthase 2 0.964 0.962 0.834 0.0
297734271430 unnamed protein product [Vitis vinifera] 0.988 0.976 0.808 0.0
449493488426 PREDICTED: LOW QUALITY PROTEIN: phosphat 0.964 0.962 0.834 0.0
255570711423 phosphatidylserine synthase, putative [R 0.983 0.988 0.865 0.0
297844412424 phosphatidyl serine synthase family prot 0.983 0.985 0.828 0.0
>gi|224099433|ref|XP_002311482.1| predicted protein [Populus trichocarpa] gi|222851302|gb|EEE88849.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/422 (86%), Positives = 390/422 (92%), Gaps = 2/422 (0%)

Query: 5   EPNGHRGVRRKDHVVQENGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGAL 64
           E NG +  RR DH+ Q NGD   +S    +DPWTAWAYKPRTIS LLIGACFLIWASGAL
Sbjct: 2   ELNGLKKERRTDHLNQTNGDLALAS-VGAVDPWTAWAYKPRTISLLLIGACFLIWASGAL 60

Query: 65  DPQ-SDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVAL 123
           DP+ S SGDVVTSVKRG+WAMIAVFL YCLLQAPST+LIRPHPAIWRLVHG+A+VYLVAL
Sbjct: 61  DPEISTSGDVVTSVKRGVWAMIAVFLGYCLLQAPSTILIRPHPAIWRLVHGLAIVYLVAL 120

Query: 124 TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVL 183
           TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR YV ENPTSRFKNV++TLFDEFVL
Sbjct: 121 TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRFYVPENPTSRFKNVWDTLFDEFVL 180

Query: 184 AHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGI 243
           AHIFGWWGKAILIRNQPLLW+LSIGFELME TFRHMLPNFNECWWDSI+LDILICNWFGI
Sbjct: 181 AHIFGWWGKAILIRNQPLLWVLSIGFELMEFTFRHMLPNFNECWWDSIVLDILICNWFGI 240

Query: 244 WAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVL 303
           WAGMHTVRYFDGKTYEWVGISRQPNI+G+ KRTLGQFTPAQWDKDEWHPLLGPWRFIQVL
Sbjct: 241 WAGMHTVRYFDGKTYEWVGISRQPNIMGRVKRTLGQFTPAQWDKDEWHPLLGPWRFIQVL 300

Query: 304 TLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKV 363
           TLCI+FL VELNTFFLKFCLWVPPRNP+I+YRLILWWLIAIPT REYNSYLQDRKPVKKV
Sbjct: 301 TLCIVFLMVELNTFFLKFCLWVPPRNPMIVYRLILWWLIAIPTTREYNSYLQDRKPVKKV 360

Query: 364 GAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLERK 423
           GAFCWLSLAICI+ELLICIKFGHGLYP PMP+WL IFW  VG  L+ FLI+WS+KSL RK
Sbjct: 361 GAFCWLSLAICIVELLICIKFGHGLYPKPMPVWLAIFWTSVGVGLVIFLIMWSWKSLGRK 420

Query: 424 RR 425
           RR
Sbjct: 421 RR 422




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424118|ref|XP_002283058.1| PREDICTED: phosphatidylserine synthase 2 [Vitis vinifera] gi|297737747|emb|CBI26948.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224111574|ref|XP_002315905.1| predicted protein [Populus trichocarpa] gi|222864945|gb|EEF02076.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356536262|ref|XP_003536658.1| PREDICTED: phosphatidylserine synthase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356575602|ref|XP_003555928.1| PREDICTED: phosphatidylserine synthase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449435204|ref|XP_004135385.1| PREDICTED: phosphatidylserine synthase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297734271|emb|CBI15518.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449493488|ref|XP_004159313.1| PREDICTED: LOW QUALITY PROTEIN: phosphatidylserine synthase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255570711|ref|XP_002526310.1| phosphatidylserine synthase, putative [Ricinus communis] gi|223534391|gb|EEF36099.1| phosphatidylserine synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297844412|ref|XP_002890087.1| phosphatidyl serine synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297335929|gb|EFH66346.1| phosphatidyl serine synthase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query425
TAIR|locus:2037788453 PSS1 "AT1G15110" [Arabidopsis 0.898 0.843 0.826 6e-185
DICTYBASE|DDB_G0278159487 pssA "phosphatidylserine synth 0.821 0.716 0.451 2e-81
UNIPROTKB|Q9BVG9487 PTDSS2 "Phosphatidylserine syn 0.915 0.798 0.375 7.7e-71
UNIPROTKB|O08888474 PTDSS2 "Phosphatidylserine syn 0.903 0.810 0.375 3.3e-70
UNIPROTKB|E1BYA3442 PTDSS1 "Phosphatidylserine syn 0.903 0.868 0.377 4.3e-70
MGI|MGI:1351664473 Ptdss2 "phosphatidylserine syn 0.903 0.811 0.372 4.3e-70
UNIPROTKB|E2R5C7482 PTDSS2 "Uncharacterized protei 0.922 0.813 0.374 7e-70
RGD|1307914471 Ptdss2 "phosphatidylserine syn 0.903 0.815 0.372 7e-70
ZFIN|ZDB-GENE-040426-837465 ptdss1 "phosphatidylserine syn 0.849 0.776 0.360 2.3e-62
ZFIN|ZDB-GENE-081031-18464 si:ch211-153f2.6 "si:ch211-153 0.842 0.771 0.364 3.8e-62
TAIR|locus:2037788 PSS1 "AT1G15110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1773 (629.2 bits), Expect = 6.0e-185, Sum P(2) = 6.0e-185
 Identities = 325/393 (82%), Positives = 351/393 (89%)

Query:     5 EPNGHRGVRRKD-HVVQENG---DTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWA 60
             EPNG+R  RRK+ H+ + NG   D +T     +LDPWTAWAYKPRTIS LLIGACFLIWA
Sbjct:     2 EPNGYRKERRKEQHLGRMNGGGGDVET-----DLDPWTAWAYKPRTISLLLIGACFLIWA 56

Query:    61 SGALDPQSD-SGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVY 119
             SGALDP S  S D+VTSVKRG+WAMIAVFL Y LLQAPSTVLIRPHPAIWRLVHGMAV+Y
Sbjct:    57 SGALDPDSTTSDDLVTSVKRGVWAMIAVFLAYSLLQAPSTVLIRPHPAIWRLVHGMAVIY 116

Query:   120 LVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFD 179
             LVALTFLLFQ+RDDARQFMKFLHPDLG+ELPE+SYGADCRIYV ++PT+RFKN+Y+T+FD
Sbjct:   117 LVALTFLLFQRRDDARQFMKFLHPDLGIELPEKSYGADCRIYVPDHPTNRFKNLYDTVFD 176

Query:   180 EFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICN 239
             EF LAHIFGWWGKAILIRNQPLLW+LSIGFEL+E+TFRHMLPNFNECWWDSI+LDILICN
Sbjct:   177 EFFLAHIFGWWGKAILIRNQPLLWVLSIGFELLEVTFRHMLPNFNECWWDSIVLDILICN 236

Query:   240 WFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRF 299
             WFGIWAGM+TVRYFDGKTYEWVGISRQPNIIGK KRTLGQFTPA WDKDEWHPL GPWRF
Sbjct:   237 WFGIWAGMYTVRYFDGKTYEWVGISRQPNIIGKVKRTLGQFTPAHWDKDEWHPLQGPWRF 296

Query:   300 IQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKP 359
             IQVLTLCIIFLTVELNTFFLKF LW+PPRNPVI+YRLILWWLIAIPT REYNSYLQDRKP
Sbjct:   297 IQVLTLCIIFLTVELNTFFLKFSLWIPPRNPVILYRLILWWLIAIPTTREYNSYLQDRKP 356

Query:   360 VKKVGAFCWLSLAXXXXXXXXXXKFGHG-LYPN 391
             VKKVGAFCWLSL           KFG G + PN
Sbjct:   357 VKKVGAFCWLSLGICIVELLICIKFGSGRIVPN 389


GO:0003882 "CDP-diacylglycerol-serine O-phosphatidyltransferase activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006659 "phosphatidylserine biosynthetic process" evidence=IEA;ISS;IMP
GO:0005634 "nucleus" evidence=IDA
GO:0005789 "endoplasmic reticulum membrane" evidence=IDA
DICTYBASE|DDB_G0278159 pssA "phosphatidylserine synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BVG9 PTDSS2 "Phosphatidylserine synthase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O08888 PTDSS2 "Phosphatidylserine synthase 2" [Cricetulus griseus (taxid:10029)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYA3 PTDSS1 "Phosphatidylserine synthase 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1351664 Ptdss2 "phosphatidylserine synthase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2R5C7 PTDSS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1307914 Ptdss2 "phosphatidylserine synthase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-837 ptdss1 "phosphatidylserine synthase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081031-18 si:ch211-153f2.6 "si:ch211-153f2.6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B2GV22PTSS2_RAT2, ., 7, ., 8, ., 2, 90.36210.96230.8683yesno
Q08D11PTSS2_XENTR2, ., 7, ., 8, ., 2, 90.37650.94820.8502yesno
O08888PTSS2_CRIGR2, ., 7, ., 8, ., 2, 90.38360.90580.8122yesno
E1BYA3PTSS2_CHICK2, ., 7, ., 8, ., 2, 90.35940.98110.9434yesno
Q9Z1X2PTSS2_MOUSE2, ., 7, ., 8, ., 2, 90.36210.96230.8646yesno
Q9BVG9PTSS2_HUMAN2, ., 7, ., 8, ., 2, 90.38380.91760.8008yesno
E7EY42PTSS2_DANRE2, ., 7, ., 8, ., 2, 90.37080.92230.8672yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.8LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00081172
CDP-diacylglycerol-serine O-phosphatidyltransferase (EC-2.7.8.8) (422 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.X.421.1
ethanolaminephosphotransferase (EC-2.7.8.1) (383 aa)
     •• 0.902
estExt_Genewise1_v1.C_LG_VIII2313
ethanolaminephosphotransferase (EC-2.7.8.1) (389 aa)
     •• 0.902
gw1.XVIII.245.1
SubName- Full=Putative uncharacterized protein; (138 aa)
     •  0.899
gw1.XVI.1394.1
hypothetical protein (823 aa)
     •  0.899
gw1.IX.3095.1
hypothetical protein (501 aa)
     •  0.899
gw1.I.9205.1
hypothetical protein (822 aa)
     •  0.899
gw1.40.286.1
phospholipase A1 (EC-3.1.1.32) (357 aa)
     •  0.899
gw1.1077.3.1
annotation not avaliable (431 aa)
     •  0.899
grail3.0068004901
hypothetical protein (535 aa)
     •  0.899
grail3.0005029501
hypothetical protein (517 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query425
PLN02930353 PLN02930, PLN02930, CDP-diacylglycerol-serine O-ph 0.0
pfam03034278 pfam03034, PSS, Phosphatidyl serine synthase 1e-146
>gnl|CDD|178518 PLN02930, PLN02930, CDP-diacylglycerol-serine O-phosphatidyltransferase Back     alignment and domain information
 Score =  700 bits (1809), Expect = 0.0
 Identities = 319/353 (90%), Positives = 341/353 (96%), Gaps = 1/353 (0%)

Query: 41  AYKPRTISFLLIGACFLIWASGALDPQS-DSGDVVTSVKRGIWAMIAVFLTYCLLQAPST 99
           AYKP TIS LLIGACFLIWASGALDP+S  SGD+VTSVKRG+WAMIAVFL YCLLQAPST
Sbjct: 1   AYKPHTISLLLIGACFLIWASGALDPESTTSGDLVTSVKRGVWAMIAVFLAYCLLQAPST 60

Query: 100 VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR 159
           VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR
Sbjct: 61  VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR 120

Query: 160 IYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHM 219
           IY  E+P+SRFKNVY+TLFDEFV+AHI GWWGKAI+IRNQPLLW+LSIGFELMELTFRHM
Sbjct: 121 IYTPEHPSSRFKNVYDTLFDEFVVAHILGWWGKAIMIRNQPLLWVLSIGFELMELTFRHM 180

Query: 220 LPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQ 279
           LPNFNECWWDSI+LD+LICNWFGIWAGMHTV+YFDGKTYEWVGISRQPNIIGK KRTLGQ
Sbjct: 181 LPNFNECWWDSIVLDVLICNWFGIWAGMHTVKYFDGKTYEWVGISRQPNIIGKVKRTLGQ 240

Query: 280 FTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILW 339
           FTPAQWDKDEWHPL GPWRF+QVL LC++FLTVELNTFFLKFCLW+PPRNP+I+YRLILW
Sbjct: 241 FTPAQWDKDEWHPLQGPWRFLQVLFLCVVFLTVELNTFFLKFCLWIPPRNPLIVYRLILW 300

Query: 340 WLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNP 392
           WLIAIPTIREYNS+LQDRKPVKK+GAFCWLSLAICI+ELLICIKFGHGL+P P
Sbjct: 301 WLIAIPTIREYNSFLQDRKPVKKLGAFCWLSLAICIVELLICIKFGHGLFPKP 353


Length = 353

>gnl|CDD|145924 pfam03034, PSS, Phosphatidyl serine synthase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 425
KOG2735466 consensus Phosphatidylserine synthase [Lipid trans 100.0
PLN02930353 CDP-diacylglycerol-serine O-phosphatidyltransferas 100.0
PF03034280 PSS: Phosphatidyl serine synthase; InterPro: IPR00 100.0
>KOG2735 consensus Phosphatidylserine synthase [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=7.1e-155  Score=1157.73  Aligned_cols=384  Identities=51%  Similarity=0.950  Sum_probs=365.8

Q ss_pred             CCCCCCCCCCcccCCccceeecchHHHHHHHHHHHHHHHhcccCCCCCCCCcccchhhhhHHHHHHHHhhhhccCCCCcc
Q 014425           22 NGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVL  101 (425)
Q Consensus        22 ~~~~~~~~~~~~~D~~~~ffykPhTit~L~~~~~~l~y~a~~~~~~~~~~~~~~n~~~G~~a~~~~Fl~~~~l~~pdgpf  101 (425)
                      .-+.+..+++.++|+|+||||||||||+|++++|.++|+|++.+.   +++++.|+|||++|++++||++|++|||||||
T Consensus        40 ~~~~~~~ne~~vdDit~dffykphTiTlL~i~~~~l~y~a~~~~~---~~~t~~N~~rGil~~i~~FL~~svlafpngpF  116 (466)
T KOG2735|consen   40 KMHFRMINERVVDDITTDFFYKPHTITLLLILICFLIYKAFTGDT---ENTTETNVKRGILAMIAVFLIISVLAFPNGPF  116 (466)
T ss_pred             hhccCccceeeeccchhhheecCceehHHHHHHHHHHHHHHhCCC---CcchHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            556778888889999999999999999999999999999998764   44579999999999999999999999999999


Q ss_pred             cCCChhHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHcCCCC--CCCCccccCCCceeeccCCCCccchhhhhcccc
Q 014425          102 IRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLG--VELPERSYGADCRIYVHENPTSRFKNVYETLFD  179 (425)
Q Consensus       102 ~RPHPa~WR~V~g~~vlYll~LvFLLFQ~~~daR~~l~~ldP~Lg--~~l~eksYa~nC~i~tpe~p~~~f~ni~~~~~D  179 (425)
                      +|||||+||+|||+||+|+++|+|+||||.+|+||+|+|+||+||  .++|||+||.||++|+||       |+|++ +|
T Consensus       117 ~RPHPa~WR~vfg~SViYll~L~FlLFQ~~~d~r~~l~wldPkl~~~~~l~EkeYg~nC~~~spd-------ri~sh-~D  188 (466)
T KOG2735|consen  117 IRPHPALWRIVFGVSVIYLLFLQFLLFQTFDDIRQFLKWLDPKLGGQIELPEKEYGVNCSIYSPD-------RIWSH-LD  188 (466)
T ss_pred             CCCCchHHHHHHHhHHHHHHHHHHHHHhhhHHHHhHheeeCcccCCCcccchhhhcCccccCCHH-------HHhhh-hh
Confidence            999999999999999999999999999999999999999999999  889999999999999875       47877 69


Q ss_pred             hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhcCCCCcchhhhHHHHHHHhhhhHHHHHHHHhhhhccCccce
Q 014425          180 EFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYE  259 (425)
Q Consensus       180 iF~~aH~~GW~~KaliiRd~~l~w~~SI~fEl~Elsf~H~LPNF~ECWWDh~iLDVL~CN~lGI~lGm~~~~~l~mk~Y~  259 (425)
                      +|++|||+||++||++|||+++||++||+||++|++|+|+||||+||||||||||||+|||+|||+||++||+|+||+|+
T Consensus       189 ~Fa~aHf~GW~mKalLIR~~~lcw~iSI~wEltE~~f~hlLPNFaECWWD~iILDVLiCNglGI~~Gmk~c~~L~mrty~  268 (466)
T KOG2735|consen  189 IFAFAHFLGWAMKALLIRHWVLCWVISIMWELTELTFRHLLPNFAECWWDSIILDVLICNGLGIWAGMKTCRWLSMRTYH  268 (466)
T ss_pred             hhHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHHHHheecccchhhhHhHHHhhhccccee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecccCCCcccchhhhccCcCCCccccccccCCCChhHHHHHHHHHHHHHHhhhhhhhhhhheecCCCCchHHHHHHHH
Q 014425          260 WVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILW  339 (425)
Q Consensus       260 W~g~~~i~~~~gK~kR~~~QFtP~sw~~~~W~~~~s~~R~~~v~~l~~~~ll~ELN~FFLK~~Lwipp~h~l~~~RL~l~  339 (425)
                      |+|+++|||++||+||++.||||+||+++||+|.+|++|+++|+.++++||++|||||||||+|||||+||++++||++|
T Consensus       269 W~sik~i~t~~GK~KR~~lQFTPasW~~~~W~p~ss~~R~~~V~~lviiwlltELNTFFlKhvf~ipp~Hpvv~~RlIli  348 (466)
T KOG2735|consen  269 WESIKNIPTTRGKMKRAALQFTPASWSKFEWHPASSLRRFAAVYTLVIIWLLTELNTFFLKHVFWIPPKHPVVLWRLILI  348 (466)
T ss_pred             eeeeccCcccchhHHHHhhccCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHheeEecCCCCceeehhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccccchhHHHHHHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHHHHH---HHHHHHHHHH
Q 014425          340 WLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGF---CLIAFLIIWS  416 (425)
Q Consensus       340 ~l~~~pa~rEyY~yitd~~~~krlG~~~Wl~~ai~~~E~li~iKfg~~~f~~p~P~~i~~~W~~~~~---~~~~~~~~~~  416 (425)
                      +++++|++||||.|+||+.| ||+|+|||+++||+++|++||||||+++|+.+.+.+|++ |+..++   ..++|..+|.
T Consensus       349 ~~i~aptiRqyy~y~tD~~~-KrvG~qcWv~~aI~~~El~IciKfg~~~f~~t~~~~Ivl-w~l~~v~~t~~~v~~~v~~  426 (466)
T KOG2735|consen  349 ALIAAPTIRQYYVYLTDKPC-KRVGMQCWVFLAICALELLICIKFGSHMFIKTQINYIVL-WLLMGVIGTFTCVLLAVWW  426 (466)
T ss_pred             HhhccchHHHHHHHccCchh-hhcchhHHHHHHHHHHHhhhheeeCCceeeecchhHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999887 999999999999999999999999999999999999755 987655   5566666664


Q ss_pred             HH
Q 014425          417 YK  418 (425)
Q Consensus       417 ~~  418 (425)
                      .+
T Consensus       427 ~~  428 (466)
T KOG2735|consen  427 AE  428 (466)
T ss_pred             Hh
Confidence            43



>PLN02930 CDP-diacylglycerol-serine O-phosphatidyltransferase Back     alignment and domain information
>PF03034 PSS: Phosphatidyl serine synthase; InterPro: IPR004277 Phosphatidyl serine synthase is also known as serine exchange enzyme (2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query425
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 53/389 (13%), Positives = 105/389 (26%), Gaps = 99/389 (25%)

Query: 4   NEPNGHRGVRR-----KDHVVQENGDTDTSSGSDELD-PWTAWAYKPRTISFLLIGACFL 57
              +   G  R          QE            ++  +     K       ++   + 
Sbjct: 56  MSKDAVSGTLRLFWTLLSK--QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY- 112

Query: 58  IWASGALDPQSDSGDVVT--SVKRG--IWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVH 113
                  D   +   V    +V R           L   LL+      +RP   +  L+ 
Sbjct: 113 ---IEQRDRLYNDNQVFAKYNVSRLQPYLK-----LRQALLE------LRPAKNV--LID 156

Query: 114 GMA-----VVYLVALTFLLFQKRDDARQF-MKFLH---PDLGVELPER-SYGADCRIYVH 163
           G+       V L        Q + D + F +   +   P+  +E+ ++  Y  D      
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 164 ENPTSRFKNVYETLFDEFVLAHIFGWWG--KAILI-RNQPLLWLLSI--GFEL---MELT 215
            + +S  K    ++  E  L  +         +L+  N   +        F L   + LT
Sbjct: 217 SDHSSNIKLRIHSIQAE--LRRLLKSKPYENCLLVLLN---VQNAKAWNAFNLSCKILLT 271

Query: 216 FRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYF-DGKTYE----WVGISRQ---- 266
            R              + D L        +  H        +       ++    Q    
Sbjct: 272 TR-----------FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 267 ------P---NIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLT-VELNT 316
                 P   +II +  R       A W  D W   +   +   ++   +  L   E   
Sbjct: 321 EVLTTNPRRLSIIAESIRDG----LATW--DNW-KHVNCDKLTTIIESSLNVLEPAEYRK 373

Query: 317 FFLKFCL-----WVPPRNPVIIYRLILWW 340
            F +  +      +P    ++    ++W+
Sbjct: 374 MFDRLSVFPPSAHIPTI--LLS---LIWF 397


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00