Citrus Sinensis ID: 014425
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 425 | ||||||
| 224099433 | 422 | predicted protein [Populus trichocarpa] | 0.988 | 0.995 | 0.869 | 0.0 | |
| 225424118 | 426 | PREDICTED: phosphatidylserine synthase 2 | 0.990 | 0.988 | 0.882 | 0.0 | |
| 224111574 | 423 | predicted protein [Populus trichocarpa] | 0.988 | 0.992 | 0.874 | 0.0 | |
| 356536262 | 426 | PREDICTED: phosphatidylserine synthase 2 | 0.988 | 0.985 | 0.849 | 0.0 | |
| 356575602 | 426 | PREDICTED: phosphatidylserine synthase 2 | 0.988 | 0.985 | 0.844 | 0.0 | |
| 449435204 | 426 | PREDICTED: phosphatidylserine synthase 2 | 0.964 | 0.962 | 0.834 | 0.0 | |
| 297734271 | 430 | unnamed protein product [Vitis vinifera] | 0.988 | 0.976 | 0.808 | 0.0 | |
| 449493488 | 426 | PREDICTED: LOW QUALITY PROTEIN: phosphat | 0.964 | 0.962 | 0.834 | 0.0 | |
| 255570711 | 423 | phosphatidylserine synthase, putative [R | 0.983 | 0.988 | 0.865 | 0.0 | |
| 297844412 | 424 | phosphatidyl serine synthase family prot | 0.983 | 0.985 | 0.828 | 0.0 |
| >gi|224099433|ref|XP_002311482.1| predicted protein [Populus trichocarpa] gi|222851302|gb|EEE88849.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/422 (86%), Positives = 390/422 (92%), Gaps = 2/422 (0%)
Query: 5 EPNGHRGVRRKDHVVQENGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGAL 64
E NG + RR DH+ Q NGD +S +DPWTAWAYKPRTIS LLIGACFLIWASGAL
Sbjct: 2 ELNGLKKERRTDHLNQTNGDLALAS-VGAVDPWTAWAYKPRTISLLLIGACFLIWASGAL 60
Query: 65 DPQ-SDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVAL 123
DP+ S SGDVVTSVKRG+WAMIAVFL YCLLQAPST+LIRPHPAIWRLVHG+A+VYLVAL
Sbjct: 61 DPEISTSGDVVTSVKRGVWAMIAVFLGYCLLQAPSTILIRPHPAIWRLVHGLAIVYLVAL 120
Query: 124 TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFDEFVL 183
TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR YV ENPTSRFKNV++TLFDEFVL
Sbjct: 121 TFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRFYVPENPTSRFKNVWDTLFDEFVL 180
Query: 184 AHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGI 243
AHIFGWWGKAILIRNQPLLW+LSIGFELME TFRHMLPNFNECWWDSI+LDILICNWFGI
Sbjct: 181 AHIFGWWGKAILIRNQPLLWVLSIGFELMEFTFRHMLPNFNECWWDSIVLDILICNWFGI 240
Query: 244 WAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVL 303
WAGMHTVRYFDGKTYEWVGISRQPNI+G+ KRTLGQFTPAQWDKDEWHPLLGPWRFIQVL
Sbjct: 241 WAGMHTVRYFDGKTYEWVGISRQPNIMGRVKRTLGQFTPAQWDKDEWHPLLGPWRFIQVL 300
Query: 304 TLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKPVKKV 363
TLCI+FL VELNTFFLKFCLWVPPRNP+I+YRLILWWLIAIPT REYNSYLQDRKPVKKV
Sbjct: 301 TLCIVFLMVELNTFFLKFCLWVPPRNPMIVYRLILWWLIAIPTTREYNSYLQDRKPVKKV 360
Query: 364 GAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGFCLIAFLIIWSYKSLERK 423
GAFCWLSLAICI+ELLICIKFGHGLYP PMP+WL IFW VG L+ FLI+WS+KSL RK
Sbjct: 361 GAFCWLSLAICIVELLICIKFGHGLYPKPMPVWLAIFWTSVGVGLVIFLIMWSWKSLGRK 420
Query: 424 RR 425
RR
Sbjct: 421 RR 422
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424118|ref|XP_002283058.1| PREDICTED: phosphatidylserine synthase 2 [Vitis vinifera] gi|297737747|emb|CBI26948.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224111574|ref|XP_002315905.1| predicted protein [Populus trichocarpa] gi|222864945|gb|EEF02076.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356536262|ref|XP_003536658.1| PREDICTED: phosphatidylserine synthase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356575602|ref|XP_003555928.1| PREDICTED: phosphatidylserine synthase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449435204|ref|XP_004135385.1| PREDICTED: phosphatidylserine synthase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297734271|emb|CBI15518.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449493488|ref|XP_004159313.1| PREDICTED: LOW QUALITY PROTEIN: phosphatidylserine synthase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255570711|ref|XP_002526310.1| phosphatidylserine synthase, putative [Ricinus communis] gi|223534391|gb|EEF36099.1| phosphatidylserine synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297844412|ref|XP_002890087.1| phosphatidyl serine synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297335929|gb|EFH66346.1| phosphatidyl serine synthase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 425 | ||||||
| TAIR|locus:2037788 | 453 | PSS1 "AT1G15110" [Arabidopsis | 0.898 | 0.843 | 0.826 | 6e-185 | |
| DICTYBASE|DDB_G0278159 | 487 | pssA "phosphatidylserine synth | 0.821 | 0.716 | 0.451 | 2e-81 | |
| UNIPROTKB|Q9BVG9 | 487 | PTDSS2 "Phosphatidylserine syn | 0.915 | 0.798 | 0.375 | 7.7e-71 | |
| UNIPROTKB|O08888 | 474 | PTDSS2 "Phosphatidylserine syn | 0.903 | 0.810 | 0.375 | 3.3e-70 | |
| UNIPROTKB|E1BYA3 | 442 | PTDSS1 "Phosphatidylserine syn | 0.903 | 0.868 | 0.377 | 4.3e-70 | |
| MGI|MGI:1351664 | 473 | Ptdss2 "phosphatidylserine syn | 0.903 | 0.811 | 0.372 | 4.3e-70 | |
| UNIPROTKB|E2R5C7 | 482 | PTDSS2 "Uncharacterized protei | 0.922 | 0.813 | 0.374 | 7e-70 | |
| RGD|1307914 | 471 | Ptdss2 "phosphatidylserine syn | 0.903 | 0.815 | 0.372 | 7e-70 | |
| ZFIN|ZDB-GENE-040426-837 | 465 | ptdss1 "phosphatidylserine syn | 0.849 | 0.776 | 0.360 | 2.3e-62 | |
| ZFIN|ZDB-GENE-081031-18 | 464 | si:ch211-153f2.6 "si:ch211-153 | 0.842 | 0.771 | 0.364 | 3.8e-62 |
| TAIR|locus:2037788 PSS1 "AT1G15110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1773 (629.2 bits), Expect = 6.0e-185, Sum P(2) = 6.0e-185
Identities = 325/393 (82%), Positives = 351/393 (89%)
Query: 5 EPNGHRGVRRKD-HVVQENG---DTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWA 60
EPNG+R RRK+ H+ + NG D +T +LDPWTAWAYKPRTIS LLIGACFLIWA
Sbjct: 2 EPNGYRKERRKEQHLGRMNGGGGDVET-----DLDPWTAWAYKPRTISLLLIGACFLIWA 56
Query: 61 SGALDPQSD-SGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVHGMAVVY 119
SGALDP S S D+VTSVKRG+WAMIAVFL Y LLQAPSTVLIRPHPAIWRLVHGMAV+Y
Sbjct: 57 SGALDPDSTTSDDLVTSVKRGVWAMIAVFLAYSLLQAPSTVLIRPHPAIWRLVHGMAVIY 116
Query: 120 LVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYVHENPTSRFKNVYETLFD 179
LVALTFLLFQ+RDDARQFMKFLHPDLG+ELPE+SYGADCRIYV ++PT+RFKN+Y+T+FD
Sbjct: 117 LVALTFLLFQRRDDARQFMKFLHPDLGIELPEKSYGADCRIYVPDHPTNRFKNLYDTVFD 176
Query: 180 EFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICN 239
EF LAHIFGWWGKAILIRNQPLLW+LSIGFEL+E+TFRHMLPNFNECWWDSI+LDILICN
Sbjct: 177 EFFLAHIFGWWGKAILIRNQPLLWVLSIGFELLEVTFRHMLPNFNECWWDSIVLDILICN 236
Query: 240 WFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRF 299
WFGIWAGM+TVRYFDGKTYEWVGISRQPNIIGK KRTLGQFTPA WDKDEWHPL GPWRF
Sbjct: 237 WFGIWAGMYTVRYFDGKTYEWVGISRQPNIIGKVKRTLGQFTPAHWDKDEWHPLQGPWRF 296
Query: 300 IQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILWWLIAIPTIREYNSYLQDRKP 359
IQVLTLCIIFLTVELNTFFLKF LW+PPRNPVI+YRLILWWLIAIPT REYNSYLQDRKP
Sbjct: 297 IQVLTLCIIFLTVELNTFFLKFSLWIPPRNPVILYRLILWWLIAIPTTREYNSYLQDRKP 356
Query: 360 VKKVGAFCWLSLAXXXXXXXXXXKFGHG-LYPN 391
VKKVGAFCWLSL KFG G + PN
Sbjct: 357 VKKVGAFCWLSLGICIVELLICIKFGSGRIVPN 389
|
|
| DICTYBASE|DDB_G0278159 pssA "phosphatidylserine synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9BVG9 PTDSS2 "Phosphatidylserine synthase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O08888 PTDSS2 "Phosphatidylserine synthase 2" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BYA3 PTDSS1 "Phosphatidylserine synthase 2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1351664 Ptdss2 "phosphatidylserine synthase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R5C7 PTDSS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|1307914 Ptdss2 "phosphatidylserine synthase 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-837 ptdss1 "phosphatidylserine synthase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-081031-18 si:ch211-153f2.6 "si:ch211-153f2.6" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00081172 | CDP-diacylglycerol-serine O-phosphatidyltransferase (EC-2.7.8.8) (422 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| gw1.X.421.1 | • | • | 0.902 | ||||||||
| estExt_Genewise1_v1.C_LG_VIII2313 | • | • | 0.902 | ||||||||
| gw1.XVIII.245.1 | • | 0.899 | |||||||||
| gw1.XVI.1394.1 | • | 0.899 | |||||||||
| gw1.IX.3095.1 | • | 0.899 | |||||||||
| gw1.I.9205.1 | • | 0.899 | |||||||||
| gw1.40.286.1 | • | 0.899 | |||||||||
| gw1.1077.3.1 | • | 0.899 | |||||||||
| grail3.0068004901 | • | 0.899 | |||||||||
| grail3.0005029501 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 425 | |||
| PLN02930 | 353 | PLN02930, PLN02930, CDP-diacylglycerol-serine O-ph | 0.0 | |
| pfam03034 | 278 | pfam03034, PSS, Phosphatidyl serine synthase | 1e-146 |
| >gnl|CDD|178518 PLN02930, PLN02930, CDP-diacylglycerol-serine O-phosphatidyltransferase | Back alignment and domain information |
|---|
Score = 700 bits (1809), Expect = 0.0
Identities = 319/353 (90%), Positives = 341/353 (96%), Gaps = 1/353 (0%)
Query: 41 AYKPRTISFLLIGACFLIWASGALDPQS-DSGDVVTSVKRGIWAMIAVFLTYCLLQAPST 99
AYKP TIS LLIGACFLIWASGALDP+S SGD+VTSVKRG+WAMIAVFL YCLLQAPST
Sbjct: 1 AYKPHTISLLLIGACFLIWASGALDPESTTSGDLVTSVKRGVWAMIAVFLAYCLLQAPST 60
Query: 100 VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR 159
VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR
Sbjct: 61 VLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCR 120
Query: 160 IYVHENPTSRFKNVYETLFDEFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHM 219
IY E+P+SRFKNVY+TLFDEFV+AHI GWWGKAI+IRNQPLLW+LSIGFELMELTFRHM
Sbjct: 121 IYTPEHPSSRFKNVYDTLFDEFVVAHILGWWGKAIMIRNQPLLWVLSIGFELMELTFRHM 180
Query: 220 LPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKFKRTLGQ 279
LPNFNECWWDSI+LD+LICNWFGIWAGMHTV+YFDGKTYEWVGISRQPNIIGK KRTLGQ
Sbjct: 181 LPNFNECWWDSIVLDVLICNWFGIWAGMHTVKYFDGKTYEWVGISRQPNIIGKVKRTLGQ 240
Query: 280 FTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILW 339
FTPAQWDKDEWHPL GPWRF+QVL LC++FLTVELNTFFLKFCLW+PPRNP+I+YRLILW
Sbjct: 241 FTPAQWDKDEWHPLQGPWRFLQVLFLCVVFLTVELNTFFLKFCLWIPPRNPLIVYRLILW 300
Query: 340 WLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNP 392
WLIAIPTIREYNS+LQDRKPVKK+GAFCWLSLAICI+ELLICIKFGHGL+P P
Sbjct: 301 WLIAIPTIREYNSFLQDRKPVKKLGAFCWLSLAICIVELLICIKFGHGLFPKP 353
|
Length = 353 |
| >gnl|CDD|145924 pfam03034, PSS, Phosphatidyl serine synthase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 425 | |||
| KOG2735 | 466 | consensus Phosphatidylserine synthase [Lipid trans | 100.0 | |
| PLN02930 | 353 | CDP-diacylglycerol-serine O-phosphatidyltransferas | 100.0 | |
| PF03034 | 280 | PSS: Phosphatidyl serine synthase; InterPro: IPR00 | 100.0 |
| >KOG2735 consensus Phosphatidylserine synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-155 Score=1157.73 Aligned_cols=384 Identities=51% Similarity=0.950 Sum_probs=365.8
Q ss_pred CCCCCCCCCCcccCCccceeecchHHHHHHHHHHHHHHHhcccCCCCCCCCcccchhhhhHHHHHHHHhhhhccCCCCcc
Q 014425 22 NGDTDTSSGSDELDPWTAWAYKPRTISFLLIGACFLIWASGALDPQSDSGDVVTSVKRGIWAMIAVFLTYCLLQAPSTVL 101 (425)
Q Consensus 22 ~~~~~~~~~~~~~D~~~~ffykPhTit~L~~~~~~l~y~a~~~~~~~~~~~~~~n~~~G~~a~~~~Fl~~~~l~~pdgpf 101 (425)
.-+.+..+++.++|+|+||||||||||+|++++|.++|+|++.+. +++++.|+|||++|++++||++|++|||||||
T Consensus 40 ~~~~~~~ne~~vdDit~dffykphTiTlL~i~~~~l~y~a~~~~~---~~~t~~N~~rGil~~i~~FL~~svlafpngpF 116 (466)
T KOG2735|consen 40 KMHFRMINERVVDDITTDFFYKPHTITLLLILICFLIYKAFTGDT---ENTTETNVKRGILAMIAVFLIISVLAFPNGPF 116 (466)
T ss_pred hhccCccceeeeccchhhheecCceehHHHHHHHHHHHHHHhCCC---CcchHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 556778888889999999999999999999999999999998764 44579999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHcCCCC--CCCCccccCCCceeeccCCCCccchhhhhcccc
Q 014425 102 IRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKFLHPDLG--VELPERSYGADCRIYVHENPTSRFKNVYETLFD 179 (425)
Q Consensus 102 ~RPHPa~WR~V~g~~vlYll~LvFLLFQ~~~daR~~l~~ldP~Lg--~~l~eksYa~nC~i~tpe~p~~~f~ni~~~~~D 179 (425)
+|||||+||+|||+||+|+++|+|+||||.+|+||+|+|+||+|| .++|||+||.||++|+|| |+|++ +|
T Consensus 117 ~RPHPa~WR~vfg~SViYll~L~FlLFQ~~~d~r~~l~wldPkl~~~~~l~EkeYg~nC~~~spd-------ri~sh-~D 188 (466)
T KOG2735|consen 117 IRPHPALWRIVFGVSVIYLLFLQFLLFQTFDDIRQFLKWLDPKLGGQIELPEKEYGVNCSIYSPD-------RIWSH-LD 188 (466)
T ss_pred CCCCchHHHHHHHhHHHHHHHHHHHHHhhhHHHHhHheeeCcccCCCcccchhhhcCccccCCHH-------HHhhh-hh
Confidence 999999999999999999999999999999999999999999999 889999999999999875 47877 69
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhcCCCCcchhhhHHHHHHHhhhhHHHHHHHHhhhhccCccce
Q 014425 180 EFVLAHIFGWWGKAILIRNQPLLWLLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYE 259 (425)
Q Consensus 180 iF~~aH~~GW~~KaliiRd~~l~w~~SI~fEl~Elsf~H~LPNF~ECWWDh~iLDVL~CN~lGI~lGm~~~~~l~mk~Y~ 259 (425)
+|++|||+||++||++|||+++||++||+||++|++|+|+||||+||||||||||||+|||+|||+||++||+|+||+|+
T Consensus 189 ~Fa~aHf~GW~mKalLIR~~~lcw~iSI~wEltE~~f~hlLPNFaECWWD~iILDVLiCNglGI~~Gmk~c~~L~mrty~ 268 (466)
T KOG2735|consen 189 IFAFAHFLGWAMKALLIRHWVLCWVISIMWELTELTFRHLLPNFAECWWDSIILDVLICNGLGIWAGMKTCRWLSMRTYH 268 (466)
T ss_pred hhHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHHHHheecccchhhhHhHHHhhhccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccCCCcccchhhhccCcCCCccccccccCCCChhHHHHHHHHHHHHHHhhhhhhhhhhheecCCCCchHHHHHHHH
Q 014425 260 WVGISRQPNIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLTVELNTFFLKFCLWVPPRNPVIIYRLILW 339 (425)
Q Consensus 260 W~g~~~i~~~~gK~kR~~~QFtP~sw~~~~W~~~~s~~R~~~v~~l~~~~ll~ELN~FFLK~~Lwipp~h~l~~~RL~l~ 339 (425)
|+|+++|||++||+||++.||||+||+++||+|.+|++|+++|+.++++||++|||||||||+|||||+||++++||++|
T Consensus 269 W~sik~i~t~~GK~KR~~lQFTPasW~~~~W~p~ss~~R~~~V~~lviiwlltELNTFFlKhvf~ipp~Hpvv~~RlIli 348 (466)
T KOG2735|consen 269 WESIKNIPTTRGKMKRAALQFTPASWSKFEWHPASSLRRFAAVYTLVIIWLLTELNTFFLKHVFWIPPKHPVVLWRLILI 348 (466)
T ss_pred eeeeccCcccchhHHHHhhccCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHheeEecCCCCceeehhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccchhHHHHHHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHHHHH---HHHHHHHHHH
Q 014425 340 WLIAIPTIREYNSYLQDRKPVKKVGAFCWLSLAICIIELLICIKFGHGLYPNPMPLWLVIFWLCVGF---CLIAFLIIWS 416 (425)
Q Consensus 340 ~l~~~pa~rEyY~yitd~~~~krlG~~~Wl~~ai~~~E~li~iKfg~~~f~~p~P~~i~~~W~~~~~---~~~~~~~~~~ 416 (425)
+++++|++||||.|+||+.| ||+|+|||+++||+++|++||||||+++|+.+.+.+|++ |+..++ ..++|..+|.
T Consensus 349 ~~i~aptiRqyy~y~tD~~~-KrvG~qcWv~~aI~~~El~IciKfg~~~f~~t~~~~Ivl-w~l~~v~~t~~~v~~~v~~ 426 (466)
T KOG2735|consen 349 ALIAAPTIRQYYVYLTDKPC-KRVGMQCWVFLAICALELLICIKFGSHMFIKTQINYIVL-WLLMGVIGTFTCVLLAVWW 426 (466)
T ss_pred HhhccchHHHHHHHccCchh-hhcchhHHHHHHHHHHHhhhheeeCCceeeecchhHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887 999999999999999999999999999999999999755 987655 5566666664
Q ss_pred HH
Q 014425 417 YK 418 (425)
Q Consensus 417 ~~ 418 (425)
.+
T Consensus 427 ~~ 428 (466)
T KOG2735|consen 427 AE 428 (466)
T ss_pred Hh
Confidence 43
|
|
| >PLN02930 CDP-diacylglycerol-serine O-phosphatidyltransferase | Back alignment and domain information |
|---|
| >PF03034 PSS: Phosphatidyl serine synthase; InterPro: IPR004277 Phosphatidyl serine synthase is also known as serine exchange enzyme (2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 425 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 3e-04
Identities = 53/389 (13%), Positives = 105/389 (26%), Gaps = 99/389 (25%)
Query: 4 NEPNGHRGVRR-----KDHVVQENGDTDTSSGSDELD-PWTAWAYKPRTISFLLIGACFL 57
+ G R QE ++ + K ++ +
Sbjct: 56 MSKDAVSGTLRLFWTLLSK--QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY- 112
Query: 58 IWASGALDPQSDSGDVVT--SVKRG--IWAMIAVFLTYCLLQAPSTVLIRPHPAIWRLVH 113
D + V +V R L LL+ +RP + L+
Sbjct: 113 ---IEQRDRLYNDNQVFAKYNVSRLQPYLK-----LRQALLE------LRPAKNV--LID 156
Query: 114 GMA-----VVYLVALTFLLFQKRDDARQF-MKFLH---PDLGVELPER-SYGADCRIYVH 163
G+ V L Q + D + F + + P+ +E+ ++ Y D
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 164 ENPTSRFKNVYETLFDEFVLAHIFGWWG--KAILI-RNQPLLWLLSI--GFEL---MELT 215
+ +S K ++ E L + +L+ N + F L + LT
Sbjct: 217 SDHSSNIKLRIHSIQAE--LRRLLKSKPYENCLLVLLN---VQNAKAWNAFNLSCKILLT 271
Query: 216 FRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYF-DGKTYE----WVGISRQ---- 266
R + D L + H + ++ Q
Sbjct: 272 TR-----------FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 267 ------P---NIIGKFKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLTLCIIFLT-VELNT 316
P +II + R A W D W + + ++ + L E
Sbjct: 321 EVLTTNPRRLSIIAESIRDG----LATW--DNW-KHVNCDKLTTIIESSLNVLEPAEYRK 373
Query: 317 FFLKFCL-----WVPPRNPVIIYRLILWW 340
F + + +P ++ ++W+
Sbjct: 374 MFDRLSVFPPSAHIPTI--LLS---LIWF 397
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00