Citrus Sinensis ID: 014429

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420----
MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLISNSQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKGGSFSQV
cccHHHHHHHHHHcccccccccccHHHHHHcccccccccEEEcccccccEEEEEcccccEEEEEEccccEEEEEEEccccccccccccccccccccHHHHHHHHHHcEEEEcccccEEEEEEEEEEEEccEEEEEEEcccccccccccccccccccccccEEEEEEEccccEEEEEEEEcccEEEEcccccEEEEccHHHHHHccEEEEEEEEEEccccEEEEEEEccccccccHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHHHEEEEEcccccEEEEEEccccccccccccccEEEEEEEEcccEEEEEEcccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHccccccccc
ccccHHHHHHHHHHHcccccccccHHHHHHHHHccccccEEEEcccccEEEEEEcccccEEEEEEccccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHEEEEEEcccccEEEEEEEEEEccccEEEEEEccccccccccccccccccccHccEEEEEEEccccEEEccEEccccEEEEEccccEEEHccEEEEEEEEEEEEEEEEEccccEEEEEEEccccccccHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccEEEEccccccEEEEEEEEcccEEEEEEcccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccc
MFRSINVTSRIFErqirtpapgtsvhcarrfyenivpsftvydiecpdhsfrkftddgQYLISFSRNhqdlivyrpmwlsfsckeedccrhdlppkakRFESFFTQLYSVTLASCNELICKDFflsmegnqfglfatstaqihdapttgraiqgvpfiEKITFHLLrledgvvldekVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTigsfcreddeLFLISNSQslatsersrlnpfpgnqvgnghnqvnqddsfLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKfgsvdggvsrnvdhhpAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCdhfhatsrnsLHMNFISSHSNNVYALEQLRSIknkggsfsqv
mfrsinvtsriferqirtpapgtsvhCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHIlqvrdlgnlVDVRTIGSFCREDDELFLISNSQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSiknkggsfsqv
MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLISNSQSLATSERSRLNPFPgnqvgnghnqvnqDDSFLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKGGSFSQV
*********RIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLIS*********************************FLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALE***************
***SINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFS***************KRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLISNSQS*****************************FLSGIKQRLLSFIFQGMWN**********SLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFG*************PAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLR************
MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLISNSQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKN********
*FRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLISNS****************************DDSFLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKG******
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MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLISNSQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKGGSFSQV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query424 2.2.26 [Sep-21-2011]
Q9ZNU6 523 Light-mediated developmen N/A no 0.966 0.783 0.767 0.0
P48732 543 Light-mediated developmen yes no 0.995 0.777 0.678 1e-167
Q9D0A0 550 DET1 homolog OS=Mus muscu yes no 0.908 0.7 0.322 1e-48
Q7L5Y6 550 DET1 homolog OS=Homo sapi yes no 0.908 0.7 0.322 2e-48
>sp|Q9ZNU6|DET1_SOLLC Light-mediated development protein DET1 OS=Solanum lycopersicum GN=DET1 PE=1 SV=1 Back     alignment and function desciption
 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/425 (76%), Positives = 366/425 (86%), Gaps = 15/425 (3%)

Query: 1   MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQY 60
           MF++ NVT+R+FERQI TPAPGTS+H ARRFYEN+VPS+T+YD+ECPDHSFRKFTDDG Y
Sbjct: 1   MFKTNNVTARLFERQICTPAPGTSIHRARRFYENVVPSYTIYDVECPDHSFRKFTDDGLY 60

Query: 61  LISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELIC 120
            +SFSRNHQDL+VYRP WL+FSCKEEDC  HDLP KA++FESFFTQLYSVTLAS  ELIC
Sbjct: 61  FVSFSRNHQDLVVYRPTWLTFSCKEEDCDTHDLPLKARKFESFFTQLYSVTLASSGELIC 120

Query: 121 KDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFH 180
           KDFFL ME NQFGLFATSTAQIHDAP TG AIQGVP +EKITFHLLRL DG +LDE+VFH
Sbjct: 121 KDFFLYMESNQFGLFATSTAQIHDAPPTGGAIQGVPSVEKITFHLLRLVDGAILDERVFH 180

Query: 181 NDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLIS 240
           ND++NLAH++G FLYDDLLAIVSLRYQ IHILQ+RD G+LVDVR IG FCREDDELFL S
Sbjct: 181 NDYVNLAHSIGAFLYDDLLAIVSLRYQRIHILQIRDSGDLVDVRAIGEFCREDDELFLNS 240

Query: 241 NSQSLATSERSRLNPFPGNQVGNG--HNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQA 298
           NSQ L             N VGNG  H+    + SFLSGIKQRLLS+IF+G+WN E DQ 
Sbjct: 241 NSQVLV------------NHVGNGFHHSLPQSETSFLSGIKQRLLSYIFRGIWN-EADQT 287

Query: 299 MRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNM 358
           MRVQ LKKKF+FHFQDY+DLIIWKVQFLDRHHLLIKFGSVDGGVSRN D HP+FFAVYNM
Sbjct: 288 MRVQCLKKKFYFHFQDYIDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADIHPSFFAVYNM 347

Query: 359 ETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKG 418
           ETTE+VAFYQNSA+ELYFLFE F DHFH +S++SLHMNF+SSHSNN++ALEQLR  KNK 
Sbjct: 348 ETTEIVAFYQNSADELYFLFELFSDHFHVSSKSSLHMNFMSSHSNNIHALEQLRCTKNKA 407

Query: 419 GSFSQ 423
            +FSQ
Sbjct: 408 TNFSQ 412
Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5.
Solanum lycopersicum (taxid: 4081)
>sp|P48732|DET1_ARATH Light-mediated development protein DET1 OS=Arabidopsis thaliana GN=DET1 PE=1 SV=2 Back     alignment and function description
>sp|Q9D0A0|DET1_MOUSE DET1 homolog OS=Mus musculus GN=Det1 PE=2 SV=2 Back     alignment and function description
>sp|Q7L5Y6|DET1_HUMAN DET1 homolog OS=Homo sapiens GN=DET1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query424
356497391 536 PREDICTED: light-mediated development pr 0.997 0.789 0.781 0.0
296089049 531 unnamed protein product [Vitis vinifera] 0.985 0.787 0.792 0.0
28439620524 deetiolated 1-like protein [Solanum tube 0.969 0.784 0.783 0.0
224127041 530 predicted protein [Populus trichocarpa] 0.985 0.788 0.790 0.0
357481305 549 Light-mediated development protein DET1 0.992 0.766 0.770 0.0
356497389 526 PREDICTED: light-mediated development pr 0.974 0.785 0.776 0.0
388512103 587 unknown [Medicago truncatula] 0.992 0.717 0.770 0.0
356538976 526 PREDICTED: light-mediated development pr 0.974 0.785 0.771 0.0
359489353510 PREDICTED: light-mediated development pr 0.941 0.782 0.775 0.0
350534582523 light-mediated development protein DET1 0.966 0.783 0.767 0.0
>gi|356497391|ref|XP_003517544.1| PREDICTED: light-mediated development protein DET1-like isoform 2 [Glycine max] Back     alignment and taxonomy information
 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/425 (78%), Positives = 375/425 (88%), Gaps = 2/425 (0%)

Query: 1   MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQY 60
           M+RS N+ +R+F+RQI TPAPGTSVH ARRFYEN+VPS TVY++ECPDHSFRKFTDDGQY
Sbjct: 1   MYRSSNIVARVFDRQICTPAPGTSVHHARRFYENLVPSHTVYEVECPDHSFRKFTDDGQY 60

Query: 61  LISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELIC 120
           LISFSRNHQ+LIVYRP WLSFSCK+EDC +HDLP +AKRF+SFF+QLY V LASCNELIC
Sbjct: 61  LISFSRNHQELIVYRPRWLSFSCKDEDCDKHDLPSRAKRFDSFFSQLYCVPLASCNELIC 120

Query: 121 KDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFH 180
           KDFFL ME NQFGLFATSTAQIHDAP  G A+ GVP IEKITFHLLRLEDG +LD+KVF 
Sbjct: 121 KDFFLYMESNQFGLFATSTAQIHDAPAVGGAVHGVPSIEKITFHLLRLEDGEILDKKVFS 180

Query: 181 NDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLIS 240
           NDF+NL HNMGVFLYDDLLAIVSLRYQTIHILQ+RD GNLVDVR IG FCREDDELFL S
Sbjct: 181 NDFVNLTHNMGVFLYDDLLAIVSLRYQTIHILQIRDSGNLVDVRAIGEFCREDDELFLNS 240

Query: 241 NSQSLATSERSRLNPFPGNQVGN--GHNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQA 298
           N+Q +A S++++    PGN + N     Q N  +SFLSGIKQRLLSFIFQG+WNEE D  
Sbjct: 241 NAQGMAFSDKNKQLQLPGNHIENHMHQGQPNLGNSFLSGIKQRLLSFIFQGLWNEERDDT 300

Query: 299 MRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNM 358
           +R+Q L+KKF+FHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRN DHHPAF AVYNM
Sbjct: 301 LRIQRLRKKFYFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADHHPAFVAVYNM 360

Query: 359 ETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKG 418
           +TTE+V+FYQNSA+ELY LFE+FCDHFHATSRNS++MNFISSHSNN++ALEQLRSIK+K 
Sbjct: 361 DTTEIVSFYQNSADELYLLFEQFCDHFHATSRNSMYMNFISSHSNNIHALEQLRSIKDKA 420

Query: 419 GSFSQ 423
            S +Q
Sbjct: 421 SSSAQ 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296089049|emb|CBI38752.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|28439620|gb|AAM18188.2| deetiolated 1-like protein [Solanum tuberosum] Back     alignment and taxonomy information
>gi|224127041|ref|XP_002319992.1| predicted protein [Populus trichocarpa] gi|222858368|gb|EEE95915.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357481305|ref|XP_003610938.1| Light-mediated development protein DET1 [Medicago truncatula] gi|355512273|gb|AES93896.1| Light-mediated development protein DET1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356497389|ref|XP_003517543.1| PREDICTED: light-mediated development protein DET1-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|388512103|gb|AFK44113.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356538976|ref|XP_003537976.1| PREDICTED: light-mediated development protein DET1-like [Glycine max] Back     alignment and taxonomy information
>gi|359489353|ref|XP_002270528.2| PREDICTED: light-mediated development protein DET1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|350534582|ref|NP_001234148.1| light-mediated development protein DET1 [Solanum lycopersicum] gi|55976635|sp|Q9ZNU6.1|DET1_SOLLC RecName: Full=Light-mediated development protein DET1; AltName: Full=Deetiolated1 homolog; AltName: Full=High pigmentation protein 2; AltName: Full=Protein dark green; AltName: Full=tDET1 gi|4038594|emb|CAA10993.1| tDET1 protein [Solanum lycopersicum] gi|4454332|emb|CAA11914.1| tDET1 protein [Solanum lycopersicum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query424
UNIPROTKB|Q9ZNU6 523 DET1 "Light-mediated developme 0.971 0.787 0.761 2e-175
TAIR|locus:2005505 543 DET1 "DE-ETIOLATED 1" [Arabido 0.995 0.777 0.669 4.5e-153
DICTYBASE|DDB_G0277075 1462 detA "putative chromatin-bindi 0.327 0.095 0.406 6.7e-55
UNIPROTKB|Q7L5Y6 550 DET1 "DET1 homolog" [Homo sapi 0.325 0.250 0.390 9.1e-45
MGI|MGI:1923625 550 Det1 "de-etiolated homolog 1 ( 0.325 0.250 0.390 9.1e-45
ZFIN|ZDB-GENE-030131-2809 563 det1 "de-etiolated homolog 1 ( 0.320 0.241 0.370 3.4e-41
FB|FBgn0000018539 abo "abnormal oocyte" [Drosoph 0.422 0.332 0.214 1.2e-05
UNIPROTKB|Q9ZNU6 DET1 "Light-mediated development protein DET1" [Solanum lycopersicum (taxid:4081)] Back     alignment and assigned GO terms
 Score = 1704 (604.9 bits), Expect = 2.0e-175, P = 2.0e-175
 Identities = 322/423 (76%), Positives = 361/423 (85%)

Query:     1 MFRSINVTSRIFERQIRTPAPGTSVHCARRFYENIVPSFTVYDIECPDHSFRKFTDDGQY 60
             MF++ NVT+R+FERQI TPAPGTS+H ARRFYEN+VPS+T+YD+ECPDHSFRKFTDDG Y
Sbjct:     1 MFKTNNVTARLFERQICTPAPGTSIHRARRFYENVVPSYTIYDVECPDHSFRKFTDDGLY 60

Query:    61 LISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELIC 120
              +SFSRNHQDL+VYRP WL+FSCKEEDC  HDLP KA++FESFFTQLYSVTLAS  ELIC
Sbjct:    61 FVSFSRNHQDLVVYRPTWLTFSCKEEDCDTHDLPLKARKFESFFTQLYSVTLASSGELIC 120

Query:   121 KDFFLSMEGNQFGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFH 180
             KDFFL ME NQFGLFATSTAQIHDAP TG AIQGVP +EKITFHLLRL DG +LDE+VFH
Sbjct:   121 KDFFLYMESNQFGLFATSTAQIHDAPPTGGAIQGVPSVEKITFHLLRLVDGAILDERVFH 180

Query:   181 NDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLIS 240
             ND++NLAH++G FLYDDLLAIVSLRYQ IHILQ+RD G+LVDVR IG FCREDDELFL S
Sbjct:   181 NDYVNLAHSIGAFLYDDLLAIVSLRYQRIHILQIRDSGDLVDVRAIGEFCREDDELFLNS 240

Query:   241 NSQSLATSERSRLNPFPXXXXXXXXXXXXXDDSFLSGIKQRLLSFIFQGMWNEETDQAMR 300
             NSQ L        N F              + SFLSGIKQRLLS+IF+G+WNE  DQ MR
Sbjct:   241 NSQVLVNHVG---NGF-------HHSLPQSETSFLSGIKQRLLSYIFRGIWNE-ADQTMR 289

Query:   301 VQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVDHHPAFFAVYNMET 360
             VQ LKKKF+FHFQDY+DLIIWKVQFLDRHHLLIKFGSVDGGVSRN D HP+FFAVYNMET
Sbjct:   290 VQCLKKKFYFHFQDYIDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADIHPSFFAVYNMET 349

Query:   361 TEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKNKGGS 420
             TE+VAFYQNSA+ELYFLFE F DHFH +S++SLHMNF+SSHSNN++ALEQLR  KNK  +
Sbjct:   350 TEIVAFYQNSADELYFLFELFSDHFHVSSKSSLHMNFMSSHSNNIHALEQLRCTKNKATN 409

Query:   421 FSQ 423
             FSQ
Sbjct:   410 FSQ 412
GO:0005515 "protein binding" evidence=IPI
TAIR|locus:2005505 DET1 "DE-ETIOLATED 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277075 detA "putative chromatin-binding protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q7L5Y6 DET1 "DET1 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1923625 Det1 "de-etiolated homolog 1 (Arabidopsis)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-2809 det1 "de-etiolated homolog 1 (Arabidopsis)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0000018 abo "abnormal oocyte" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZNU6DET1_SOLLCNo assigned EC number0.76700.96690.7839N/Ano
P48732DET1_ARATHNo assigned EC number0.67890.99520.7771yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_XIII000489
hypothetical protein (530 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pg.C_LG_I002797
hypothetical protein (1088 aa)
    • • 0.707
estExt_fgenesh4_pm.C_LG_I0627
hypothetical protein (558 aa)
      • 0.540

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
pfam09737 407 pfam09737, Det1, De-etiolated protein 1 Det1 1e-106
>gnl|CDD|220372 pfam09737, Det1, De-etiolated protein 1 Det1 Back     alignment and domain information 
 Score =  319 bits (818), Expect = e-106
 Identities = 129/316 (40%), Positives = 168/316 (53%), Gaps = 32/316 (10%)

Query: 121 KDFFLSMEGNQFGLFATSTAQIHDAP-------TTGRAIQGVPFIEKITFHLLRLEDGVV 173
           ++  L  E  ++ +   +TA              T  AI G P +E  TFHL+ L  GV+
Sbjct: 1   RECSLFTEDGRYVIVGAATAVPEAPYPRFYELYDTSEAISGNPPLEDYTFHLVDLHTGVI 60

Query: 174 LDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCRED 233
           LD + F ND I L+HN GV LY D LAI+S ++Q IHI QV   G  ++VRTIG FCRED
Sbjct: 61  LDARDFRNDKIVLSHNQGVSLYGDTLAILSRQHQRIHIFQVAAEGRFIEVRTIGRFCRED 120

Query: 234 DELFLISNSQSLATSERSRLNPFPGNQVGNGHNQVNQDDSFLSGIKQRLLSFIFQGMWNE 293
           DELFL   S                 +VG           F++G+KQRLLSF+++    +
Sbjct: 121 DELFLTEASSVH--------------EVGTNIIDRATRLPFITGLKQRLLSFLYRQAKAD 166

Query: 294 ETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNVD--HHPA 351
            +  A R     +KF+ +F++Y  LI+WK+Q LDR  LLIK+GS D    R  D    P+
Sbjct: 167 SSSGADR----LRKFYRNFEEYRHLIMWKMQLLDRDLLLIKYGSEDVVTLRTADPNIQPS 222

Query: 352 FFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQL 411
           FF VYN+  TEVV  YQN++ EL  LFE+FCD F   S      NF SSHS N YAL   
Sbjct: 223 FFVVYNITKTEVVGVYQNTSVELLELFEQFCDSFRNASL-HSTTNFRSSHSGNAYALPIH 281

Query: 412 RSIK----NKGGSFSQ 423
           R  K    N  G   +
Sbjct: 282 RRFKQTIINARGGGHR 297

This is the C-terminal conserved 400 residues of Det1 proteins of approximately 550 amino acids. Det1 (de-etiolated-1) is an essential negative regulator of plant light responses, and it is a component of the Arabidopsis CDD complex containing DDB1 and COP10 ubiquitin E2 variant. Mammalian Det1 forms stable DDD-E2 complexes, consisting of DDB1, DDA1 (DET1, DDB1 Associated 1), and a member of the UBE2E group of canonical ubiquitin conjugating enzymes and modulates Cul4A function. Length = 407

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 424
PF09737 407 Det1: De-etiolated protein 1 Det1; InterPro: IPR01 100.0
KOG2558 532 consensus Negative regulator of histones [Transcri 100.0
KOG2558 532 consensus Negative regulator of histones [Transcri 99.85
KOG0275508 consensus Conserved WD40 repeat-containing protein 93.87
PRK11028330 6-phosphogluconolactonase; Provisional 92.98
KOG1446311 consensus Histone H3 (Lys4) methyltransferase comp 91.67
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 91.24
PRK11028330 6-phosphogluconolactonase; Provisional 87.66
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 87.16
PF05935477 Arylsulfotrans: Arylsulfotransferase (ASST); Inter 86.12
COG2706346 3-carboxymuconate cyclase [Carbohydrate transport 85.82
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 85.0
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 83.77
>PF09737 Det1: De-etiolated protein 1 Det1; InterPro: IPR019138 This entry represents Det1 family proteins [] Back     alignment and domain information 
Probab=100.00  E-value=4.4e-105  Score=812.19  Aligned_cols=277  Identities=52%  Similarity=0.851  Sum_probs=255.2

Q ss_pred             eeeeEEecCceEEEEEeeccccCCCCC-------CCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceee
Q 014429          121 KDFFLSMEGNQFGLFATSTAQIHDAPT-------TGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVF  193 (424)
Q Consensus       121 refsLft~dgryvivasa~~~~~~~~~-------~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~  193 (424)
                      ||||||||||||||||||+++++++++       +||+++|+|++|+||||||||+||+|||+++|++|+|+||||||||
T Consensus         1 refsLft~dgryvivasat~~~~~~~~~~~d~~~~~eav~~~~~lE~~tfhlVdL~~G~v~D~~~f~~D~I~LsHn~Gv~   80 (407)
T PF09737_consen    1 REFSLFTEDGRYVIVASATAVPEDPPPRFYDIYRNNEAVSPVPPLEDYTFHLVDLHDGVVCDRRTFKNDKIHLSHNQGVY   80 (407)
T ss_pred             CceEEEecCCCEEEEEecccCCCCCCchhhhhhhcCCCcCCCCChhhEEEEEEEccCCcEecceEecCcEEEeccCcceE
Confidence            899999999999999999999776665       9999999999999999999999999999999999999999999999


Q ss_pred             eecceeeeeeeceeEEEEEEEccCCeEEEeeeeCCccCcchHHHHhhccchhhhcccccCCCCCCCCCCCCCCCCCCCCc
Q 014429          194 LYDDLLAIVSLRYQTIHILQVRDLGNLVDVRTIGSFCREDDELFLISNSQSLATSERSRLNPFPGNQVGNGHNQVNQDDS  273 (424)
Q Consensus       194 Ly~dlLAILS~q~QtIhi~qI~~~G~fv~vrtIG~fc~eDD~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (424)
                      ||+|+|||||+||||||||||+++|+||+||+|||||+||||++++++.+... ..            .....+| ++++
T Consensus        81 Ly~dlLaILS~q~QtIhi~qI~~~G~fv~vr~IG~~c~eDDel~l~~~~~~~~-~~------------~~~~~~~-~~~p  146 (407)
T PF09737_consen   81 LYGDLLAILSLQHQTIHIFQIRPDGRFVDVRTIGRFCREDDELFLSSQSQAHE-RD------------QNNLDRP-FREP  146 (407)
T ss_pred             EecchHHHHhhhheEEEEEEEcCCCEEEEeEEECCCcCCcHHHHhhccccccc-cc------------ccccccc-cccc
Confidence            99999999999999999999999999999999999999999999999876310 00            0111234 6688


Q ss_pred             ccchhhhHHHHHhhccccccccchHHHHHHHHHHHhhchHHHhhhhhhhhhhccCCeeeEeecccccccccCC--CCCce
Q 014429          274 FLSGIKQRLLSFIFQGMWNEETDQAMRVQSLKKKFFFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGVSRNV--DHHPA  351 (424)
Q Consensus       274 ~i~giKqRlLsfLyr~a~~~~~~~~~~~~~l~~~Fy~~F~~~~~L~MWKmQlLD~~hLLIky~s~D~~~~r~~--~~~~s  351 (424)
                      +||||||||||||||+|++++++++   +++| +||++||+|++||||||||||++||||||++||++++|.+  ++||+
T Consensus       147 ~i~~iKqRlLsfLyr~~~~~~~~~~---~~~r-~Fy~~F~~~~~L~MWKmQlLD~~hLLIky~s~D~~~~r~~d~~~~~s  222 (407)
T PF09737_consen  147 FINGIKQRLLSFLYRRAWRESSDPA---DRLR-RFYFNFDQYRSLRMWKMQLLDEDHLLIKYGSEDVVTLRVSDPNSQPS  222 (407)
T ss_pred             cccchhHHhHHHHHhhhhhcCCcch---hhHH-HHHHHHHHHHHHHhhhhhhcchhheeeeeccccceeeccCCCCCCce
Confidence            9999999999999999987777774   4457 9999999999999999999999999999999999999954  46999


Q ss_pred             EEEEEeeccceEEEEEcCChHHHHHHHHHhhhccccccCCCCCcccccCCCccHHHHHHHHHHHh
Q 014429          352 FFAVYNMETTEVVAFYQNSAEELYFLFEKFCDHFHATSRNSLHMNFISSHSNNVYALEQLRSIKN  416 (424)
Q Consensus       352 ffvvYnm~t~eVl~vyen~S~eLl~lfe~f~d~fr~~~~~~~~~~f~~s~snn~~ar~~~~r~k~  416 (424)
                      |||||||+||||||||||+|+|||+|||||||+|||+++++++ +|+||+|||+|||+++||+|.
T Consensus       223 ffvvYn~~t~eV~~vyen~S~eLl~l~e~f~d~f~~~~~~~~~-~f~~s~s~n~~a~~~~~~~k~  286 (407)
T PF09737_consen  223 FFVVYNMETTEVLGVYENSSEELLKLFEQFCDHFRNAPLNSPN-NFRSSPSNNIYARPQHRRFKQ  286 (407)
T ss_pred             EEEEEeeccceEEEEEcCChHHHHHHHHHHHHHhhcccccccc-CCccCCCCChhhhHHHHHHHH
Confidence            9999999999999999999999999999999999999999985 999999999999999999994

Det1 (de-etiolated-1) is an essential negative regulator of plant light responses, and it is a component of the Arabidopsis CDD complex containing DDB1 and COP10 ubiquitin E2 variant. Mammalian Det1 forms stable DDD-E2 complexes, consisting of DDB1, DDA1 (DET1, DDB1 Associated 1), is a member of the UBE2E group of canonical ubiquitin conjugating enzymes and modulates Cul4A function [].
>KOG2558 consensus Negative regulator of histones [Transcription] Back     alignment and domain information
>KOG2558 consensus Negative regulator of histones [Transcription] Back     alignment and domain information
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins Back     alignment and domain information
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 73/486 (15%), Positives = 134/486 (27%), Gaps = 150/486 (30%)

Query: 2   FRSINVTSRIFERQIRT------PAPGTSVH----CARRFYENIVPSFTVYDIE-CPDHS 50
           F   NV+      ++R       PA    +       +          T   ++ C  + 
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK----------TWVALDVCLSYK 175

Query: 51  FRKFTDDGQYLISFSRNHQDLIVYRPMW-LSFSCKEEDCCRHDLPPKAK-RFES------ 102
            +   D   + ++    +    V   +  L +        R D     K R  S      
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 103 --FFTQLYSVTLASCNELICKDFFLSMEGNQFG-----LFATSTAQIHDAPTTGRAIQGV 155
               ++ Y   L     L+  +   +   N F      L  T   Q+ D           
Sbjct: 236 RLLKSKPYENCL-----LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD----------- 279

Query: 156 PFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHILQVR 215
                            +      H   I+L H+      D++ +++    + +   + +
Sbjct: 280 ----------------FLSAATTTH---ISLDHHSMTLTPDEVKSLLL---KYLDC-RPQ 316

Query: 216 DL------GNLVDVRTIGSFCRED----DELFLISNSQSLATSERS--RLNP-------- 255
           DL       N   +  I    R+     D    ++  +     E S   L P        
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

Query: 256 ----FPGNQVGNGHNQVNQDDSFLSGIKQRLLSFIFQGMWNEETDQAM---RVQSL---- 304
               FP +         +        I   LLS I+  +   +    +      SL    
Sbjct: 377 RLSVFPPS--------AH--------IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 305 KKKFFFHFQD-YVDLIIWKVQFLDR---HHLLI-------KFGSVDGGVSRNVDHHPAFF 353
            K+        Y++L   KV+  +    H  ++        F S D  +   +D +    
Sbjct: 421 PKESTISIPSIYLEL---KVKLENEYALHRSIVDHYNIPKTFDS-DDLIPPYLDQYFYSH 476

Query: 354 AVYNMETTEVVAFYQNSAEELYFLFEK-FCD-HF-HATSRNSLHMNFISSHSNNVYALEQ 410
             ++++  E          E   LF   F D  F     R+       S    N   L+Q
Sbjct: 477 IGHHLKNIE--------HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT--LQQ 526

Query: 411 LRSIKN 416
           L+  K 
Sbjct: 527 LKFYKP 532

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query424
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 94.55
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 94.15
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 93.67
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 93.1
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 92.83
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 92.75
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 92.02
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 91.54
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 91.35
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 90.71
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 90.38
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 90.37
1jof_A365 Carboxy-CIS,CIS-muconate cyclase; beta-propeller, 90.33
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 90.12
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 89.39
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 89.17
2gop_A347 Trilobed protease; beta propeller, open velcro, hy 88.74
1jof_A365 Carboxy-CIS,CIS-muconate cyclase; beta-propeller, 88.68
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 87.35
2j04_A 588 TAU60, YPL007P, hypothetical protein YPL007C; beta 87.24
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 87.2
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 86.23
1xfd_A 723 DIP, dipeptidyl aminopeptidase-like protein 6, dip 86.09
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 84.97
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 84.87
2z3z_A 706 Dipeptidyl aminopeptidase IV; peptidase family S9, 84.58
3dw8_B447 Serine/threonine-protein phosphatase 2A 55 kDa RE 84.33
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 84.31
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 83.94
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 83.44
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 83.01
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 82.98
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 82.4
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 82.3
3vu4_A355 KMHSV2; beta-propeller fold, protein transport; 2. 81.5
3azo_A 662 Aminopeptidase; POP family, hydrolase; 2.00A {Stre 81.37
2pm7_B297 Protein transport protein SEC13, protein transport 81.06
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 81.03
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 80.92
3pe7_A388 Oligogalacturonate lyase; seven-bladed beta-propel 80.83
3vu4_A355 KMHSV2; beta-propeller fold, protein transport; 2. 80.53
3azo_A 662 Aminopeptidase; POP family, hydrolase; 2.00A {Stre 80.4
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 80.23
1qks_A567 Cytochrome CD1 nitrite reductase; enzyme, oxidored 80.13
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
Probab=94.55  E-value=2.1  Score=39.72  Aligned_cols=133  Identities=16%  Similarity=0.177  Sum_probs=74.2

Q ss_pred             eeeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCce
Q 014429           52 RKFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQ  131 (424)
Q Consensus        52 RKFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgr  131 (424)
                      -.|+|||++|++-+.....+.||+....+.... .+    .....        ...-...+..+.. . + ...|..||+
T Consensus       160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~-~~----~l~~~--------~~~~~~~~~~~~~-~-~-~~~~spdg~  223 (361)
T 3scy_A          160 VRITPDGKYLLADDLGTDQIHKFNINPNANADN-KE----KFLTK--------GTPEAFKVAPGSG-P-R-HLIFNSDGK  223 (361)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTCCTTT-CC----CCEEE--------EEEEEEECCTTCC-E-E-EEEECTTSS
T ss_pred             EEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc-cc----ceeec--------ccccceecCCCCC-C-e-EEEEcCCCC
Confidence            479999999988887788899998862110000 00    00000        0001112222221 1 1 356789999


Q ss_pred             EEEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccc--------eEEeeccceeeeecceeeeee
Q 014429          132 FGLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHND--------FINLAHNMGVFLYDDLLAIVS  203 (424)
Q Consensus       132 yvivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D--------~I~LsHN~Gv~Ly~dlLAILS  203 (424)
                      ++.++...                    +=++.++|+.+|.+.-...+...        -|.++.+      +..|++..
T Consensus       224 ~l~v~~~~--------------------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spd------g~~l~v~~  277 (361)
T 3scy_A          224 FAYLINEI--------------------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPD------GKYLYASN  277 (361)
T ss_dssp             EEEEEETT--------------------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTT------SSEEEEEE
T ss_pred             EEEEEcCC--------------------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCC------CCEEEEEC
Confidence            98886321                    12478899999876433333221        2333332      23455555


Q ss_pred             ec-eeEEEEEEEc-cCCeEEEeeee
Q 014429          204 LR-YQTIHILQVR-DLGNLVDVRTI  226 (424)
Q Consensus       204 ~q-~QtIhi~qI~-~~G~fv~vrtI  226 (424)
                      .. .-+|.||.+. .+|++..+..+
T Consensus       278 ~~~~~~i~v~~~~~~~g~~~~~~~~  302 (361)
T 3scy_A          278 RLKADGVAIFKVDETNGTLTKVGYQ  302 (361)
T ss_dssp             CSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred             CCCCCEEEEEEEcCCCCcEEEeeEe
Confidence            55 6899999996 46887666654
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} Back     alignment and structure
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Back     alignment and structure
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Back     alignment and structure
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} Back     alignment and structure
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Back     alignment and structure
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query424
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 94.88
d1qksa2432 C-terminal (heme d1) domain of cytochrome cd1-nitr 94.25
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 93.8
d1pbyb_337 Quinohemoprotein amine dehydrogenase B chain {Para 92.71
d1hzua2426 C-terminal (heme d1) domain of cytochrome cd1-nitr 92.19
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 92.08
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 91.56
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 90.97
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 90.92
d1jofa_365 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu 90.23
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 89.03
d1pgua1325 Actin interacting protein 1 {Baker's yeast (Saccha 86.38
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 85.71
d1sq9a_393 Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac 85.65
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 84.75
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 84.01
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 83.01
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 82.95
d1tbga_340 beta1-subunit of the signal-transducing G protein 82.08
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 81.67
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=94.88  E-value=0.26  Score=41.87  Aligned_cols=122  Identities=20%  Similarity=0.183  Sum_probs=66.4

Q ss_pred             eeCCCCCeEEEeeCCCceEEEEeecCCCCCcCcccccCCCCCccccchhhhhheeeEEEcCCCCeeeeeeeeEEecCceE
Q 014429           53 KFTDDGQYLISFSRNHQDLIVYRPMWLSFSCKEEDCCRHDLPPKAKRFESFFTQLYSVTLASCNELICKDFFLSMEGNQF  132 (424)
Q Consensus        53 KFTpDG~yLIaFS~dq~sL~vYry~g~~~~~~~~e~~~~~~~~r~~~F~~fF~~~~~~~la~~~e~L~refsLft~dgry  132 (424)
                      .|||||++|.+=+.+...+.+|+........                     +..-.......-.     ..-+.+||+|
T Consensus        43 a~spDG~~L~v~~~~d~~i~~~~i~~~~~~~---------------------~~~~~~~~~~~p~-----~l~~spDg~~   96 (333)
T d1ri6a_          43 VVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL---------------------TFAAESALPGSLT-----HISTDHQGQF   96 (333)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEECTTTCCE---------------------EEEEEEECSSCCS-----EEEECTTSSE
T ss_pred             EEeCCCCEEEEEECCCCeEEEEEEeCCCCcE---------------------EEeeecccCCCce-----EEEEcCCCCE
Confidence            6999999998878888889999875211000                     0011111111111     2457789999


Q ss_pred             EEEEeeccccCCCCCCCCCCcCCCCcceeEEEEEEccCceEeeeeeeccceEEeeccceeeeecceeeeeeeceeEEEEE
Q 014429          133 GLFATSTAQIHDAPTTGRAIQGVPFIEKITFHLLRLEDGVVLDEKVFHNDFINLAHNMGVFLYDDLLAIVSLRYQTIHIL  212 (424)
Q Consensus       133 vivasa~~~~~~~~~~ne~v~~~P~le~ytfhlVdL~~G~v~D~~~f~~D~I~LsHN~Gv~Ly~dlLAILS~q~QtIhi~  212 (424)
                      +.+++..                    +.++.+++..++..........- ....|.-.+.-.+..+.+.+..-.+|.+|
T Consensus        97 l~v~~~~--------------------~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~v~~s~d~~~~~~~~~~~~~i~~~  155 (333)
T d1ri6a_          97 VFVGSYN--------------------AGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLF  155 (333)
T ss_dssp             EEEEETT--------------------TTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred             EeecccC--------------------CCceeeeccccccceecccccCC-CccceEEEeeecceeeeccccccceeeEE
Confidence            9886321                    12344555555544333221110 00112222233456677888888899999


Q ss_pred             EEccCCeEE
Q 014429          213 QVRDLGNLV  221 (424)
Q Consensus       213 qI~~~G~fv  221 (424)
                      .....+...
T Consensus       156 ~~~~~~~~~  164 (333)
T d1ri6a_         156 TVSDDGHLV  164 (333)
T ss_dssp             EECTTSCEE
T ss_pred             EeccCCcce
Confidence            987655444
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure