Citrus Sinensis ID: 014618

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-

MAGGAAPKADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSVTSTVSE

cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcHHcHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccc

cccccccccccccccccHHcccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcHHHHHHHHHHHHcccccccccccccHcHHEEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcEEEccccc

maggaapkadeplphpakdqlpsisycitspppwpeaILLGFQHYIVMLGTTvliptslvpqmgggneEKAKVIQTLLFVAGLNTLLQSLfgtrlpavmggsytfvpSTISIILAgrfsnysgdpvEKFKRTMRAIQGSLIVASTLQIVLGFSGLWrnvtrflsplsvvplislvgfglyefgfpgvakcveigLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVggayndaapktqascrtdraglidaapwirvpwpfqwgapsfdAGEAFAMMMASFVALVESTGAFFAVARyasatpmppsvlsrgvgwqGVGILLSGlfgtvngtsVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKfgavfasipAPIVAALYCLFFAYVLEVLASFSsvtstvse

maggaapkadeplphpaKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSsvtstvse

MAGGAAPKADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFlsplsvvplislvGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSVTSTVSE

***********************ISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFS********

****************************TSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSVTS****

***********PLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASF*********

********************LPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVLEVLASFSSVTSTV**

oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii

ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiii

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHooooooooooo

oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		421	2.2.26 [Sep-21-2011]
Q27GI3		532	Nucleobase-ascorbate tran	no	no	0.959	0.759	0.850	0.0
Q8RWE9		528	Nucleobase-ascorbate tran	no	no	0.950	0.757	0.803	0.0
Q0WPE9		538	Nucleobase-ascorbate tran	no	no	0.942	0.737	0.776	0.0
Q8VZQ5		539	Nucleobase-ascorbate tran	no	no	0.945	0.738	0.699	1e-166
O04472		541	Putative nucleobase-ascor	no	no	0.959	0.746	0.563	1e-140
Q94C70		524	Nucleobase-ascorbate tran	no	no	0.971	0.780	0.602	1e-139
P93039		526	Nucleobase-ascorbate tran	no	no	0.947	0.758	0.615	1e-139
Q41760		527	Nucleobase-ascorbate tran	N/A	no	0.940	0.751	0.586	1e-138
Q9SHZ3		520	Nucleobase-ascorbate tran	no	no	0.961	0.778	0.572	1e-129
Q8GZD4		551	Nucleobase-ascorbate tran	no	no	0.959	0.733	0.520	1e-115

>sp\|Q27GI3\|NAT6_ARATH Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2	Back alignment and function desciption

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/407 (85%), Positives = 383/407 (94%), Gaps = 3/407 (0%)

Query: 1   MAGGAAP--KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTS 58
           MAGG AP  KADEP PHP KDQLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+
Sbjct: 1   MAGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTA 60

Query: 59  LVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRF 118
           LVPQMGGG EEKAKVIQT+LFVAG+NTLLQ+LFGTRLPAV+G SYTFVP+TISIIL+GRF
Sbjct: 61  LVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRF 120

Query: 119 SNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFG 178
           S+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRNV RFLSP+S VPL+ LVGFG
Sbjct: 121 SDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFG 179

Query: 179 LYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLL 238
           LYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLL
Sbjct: 180 LYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLL 239

Query: 239 TVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 298
           TVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL
Sbjct: 240 TVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 299

Query: 299 VESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALT 358
           VESTGAF AV+RYASAT +PPS+LSRG+GWQGV IL+SGLFGT  G+SVSVENAGLLALT
Sbjct: 300 VESTGAFVAVSRYASATMLPPSILSRGIGWQGVAILISGLFGTGAGSSVSVENAGLLALT 359

Query: 359 RVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYV 405
           RVGSRRVVQI+AGFMIFFS+LGKFGAVFASIPAPI+AALYCLFFAYV
Sbjct: 360 RVGSRRVVQIAAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYV 406

Arabidopsis thaliana (taxid: 3702)

>sp\|Q8RWE9\|NAT5_ARATH Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1	Back alignment and function description

>sp\|Q0WPE9\|NAT7_ARATH Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2	Back alignment and function description

>sp\|Q8VZQ5\|NAT8_ARATH Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1	Back alignment and function description

>sp\|O04472\|NAT10_ARATH Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2	Back alignment and function description

>sp\|Q94C70\|NAT2_ARATH Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2	Back alignment and function description

>sp\|P93039\|NAT4_ARATH Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2	Back alignment and function description

>sp\|Q41760\|LPE1_MAIZE Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2	Back alignment and function description

>sp\|Q9SHZ3\|NAT1_ARATH Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1	Back alignment and function description

>sp\|Q8GZD4\|NAT3_ARATH Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		421
255540763		531	purine permease, putative [Ricinus commu	0.942	0.747	0.884	0.0
356516694		531	PREDICTED: nucleobase-ascorbate transpor	0.959	0.760	0.862	0.0
356508649		531	PREDICTED: nucleobase-ascorbate transpor	0.959	0.760	0.862	0.0
224121656		529	nucleobase ascorbate transporter [Populu	0.957	0.761	0.871	0.0
449440700		530	PREDICTED: nucleobase-ascorbate transpor	0.959	0.762	0.859	0.0
224135763		528	nucleobase ascorbate transporter [Populu	0.954	0.761	0.861	0.0
225457114		531	PREDICTED: nucleobase-ascorbate transpor	0.942	0.747	0.866	0.0
145334873		476	nucleobase-ascorbate transporter 6 [Arab	0.959	0.848	0.850	0.0
15241994		532	nucleobase-ascorbate transporter 6 [Arab	0.959	0.759	0.850	0.0
297793879		532	hypothetical protein ARALYDRAFT_496474 [	0.959	0.759	0.847	0.0

>gi\|255540763\|ref\|XP_002511446.1\| purine permease, putative [Ricinus communis] gi\|223550561\|gb\|EEF52048.1\| purine permease, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/398 (88%), Positives = 382/398 (95%), Gaps = 1/398 (0%)

Query: 8   KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGN 67
           K +EP PHP K+QLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+LVPQMGGGN
Sbjct: 9   KPEEPQPHPPKEQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGN 68

Query: 68  EEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVE 127
           +EKA+VIQTLLFVAGLNTLLQSLFGTRLPAV+GGSYTFVP+TISIILAGRFS+ + DP E
Sbjct: 69  KEKAQVIQTLLFVAGLNTLLQSLFGTRLPAVIGGSYTFVPTTISIILAGRFSD-ATDPEE 127

Query: 128 KFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGV 187
           +FK  MRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLS VPL++LVGFGLYE GFPGV
Sbjct: 128 RFKSIMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSAVPLVALVGFGLYELGFPGV 187

Query: 188 AKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDA 247
           AKCVEIGLP+L+I+VF+SQY+PHVIK  +++FDRFAVIFS+VIVWIYAHLLTVGGAYNDA
Sbjct: 188 AKCVEIGLPELIILVFVSQYMPHVIKSRRHVFDRFAVIFSIVIVWIYAHLLTVGGAYNDA 247

Query: 248 APKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFA 307
           APKTQ +CRTDRAGLIDAAPWIRVP+PFQWGAPSFDAGEAFAMMMASFVALVESTGAF A
Sbjct: 248 APKTQNTCRTDRAGLIDAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESTGAFIA 307

Query: 308 VARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQ 367
           V+RYASATPMPPSVLSRG+GWQGV ILLSGLFGTVN +SVSVENAGLLALTRVGSRRVVQ
Sbjct: 308 VSRYASATPMPPSVLSRGIGWQGVAILLSGLFGTVNASSVSVENAGLLALTRVGSRRVVQ 367

Query: 368 ISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYV 405
           ISAGFMIFFS+LGKFGAVFASIPAPI+AALYCLFFAYV
Sbjct: 368 ISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYV 405

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356516694\|ref\|XP_003527028.1\| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 1 [Glycine max] gi\|356516696\|ref\|XP_003527029.1\| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 2 [Glycine max]	Back alignment and taxonomy information

>gi\|356508649\|ref\|XP_003523067.1\| PREDICTED: nucleobase-ascorbate transporter 6-like [Glycine max]	Back alignment and taxonomy information

>gi\|224121656\|ref\|XP_002318639.1\| nucleobase ascorbate transporter [Populus trichocarpa] gi\|222859312\|gb\|EEE96859.1\| nucleobase ascorbate transporter [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449440700\|ref\|XP_004138122.1\| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus] gi\|449477394\|ref\|XP_004155010.1\| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224135763\|ref\|XP_002322154.1\| nucleobase ascorbate transporter [Populus trichocarpa] gi\|222869150\|gb\|EEF06281.1\| nucleobase ascorbate transporter [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225457114\|ref\|XP_002283469.1\| PREDICTED: nucleobase-ascorbate transporter 6 [Vitis vinifera] gi\|297733828\|emb\|CBI15075.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|145334873\|ref\|NP_001078782.1\| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi\|222422853\|dbj\|BAH19413.1\| AT5G62890 [Arabidopsis thaliana] gi\|332010288\|gb\|AED97671.1\| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi|15241994|ref|NP_201094.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|79600443|ref|NP_851251.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|145323680|ref|NP_001032127.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|122064607|sp|Q27GI3.2|NAT6_ARATH RecName: Full=Nucleobase-ascorbate transporter 6; Short=AtNAT6 gi|21326025|gb|AAM47573.1|AF466198_1 putative permease 1 [Arabidopsis thaliana] gi|10177467|dbj|BAB10858.1| permease 1 [Arabidopsis thaliana] gi|332010285|gb|AED97668.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010286|gb|AED97669.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010287|gb|AED97670.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297793879\|ref\|XP_002864824.1\| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata] gi\|297310659\|gb\|EFH41083.1\| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		421
TAIR\|locus:2170783		532	AT5G62890 [Arabidopsis thalian	0.959	0.759	0.828	2e-182
TAIR\|locus:2158829		528	AT5G49990 [Arabidopsis thalian	0.950	0.757	0.781	5e-170
TAIR\|locus:2202700		538	NAT7 "nucleobase-ascorbate tra	0.954	0.747	0.750	4.3e-164
TAIR\|locus:2194631		539	NAT8 "nucleobase-ascorbate tra	0.945	0.738	0.679	2.3e-149
TAIR\|locus:2031085		526	AT1G49960 [Arabidopsis thalian	0.947	0.758	0.595	5.6e-132
TAIR\|locus:2040874		524	AT2G34190 [Arabidopsis thalian	0.964	0.774	0.589	4.8e-126
TAIR\|locus:2034104		541	AT1G65550 [Arabidopsis thalian	0.969	0.754	0.548	1.3e-125
TAIR\|locus:2060076		520	AT2G05760 [Arabidopsis thalian	0.959	0.776	0.556	1.1e-117
TAIR\|locus:2066190		551	PDE135 "pigment defective embr	0.959	0.733	0.503	1e-107
TAIR\|locus:2145507		419	AT5G25420 [Arabidopsis thalian	0.439	0.441	0.548	6.9e-93

TAIR\|locus:2170783 AT5G62890 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1770 (628.1 bits), Expect = 2.0e-182, P = 2.0e-182
 Identities = 337/407 (82%), Positives = 372/407 (91%)

Query:     1 MAGGAAP--KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTS 58
             MAGG AP  KADEP PHP KDQLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+
Sbjct:     1 MAGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTA 60

Query:    59 LVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRF 118
             LVPQMGGG EEKAKVIQT+LFVAG+NTLLQ+LFGTRLPAV+G SYTFVP+TISIIL+GRF
Sbjct:    61 LVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRF 120

Query:   119 SNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFG 178
             S+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRNV RF             GFG
Sbjct:   121 SDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFG 179

Query:   179 LYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLL 238
             LYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLL
Sbjct:   180 LYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLL 239

Query:   239 TVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 298
             TVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL
Sbjct:   240 TVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 299

Query:   299 VESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALT 358
             VESTGAF AV+RYASAT +PPS+LSRG+GWQGV IL+SGLFGT  G+SVSVENAGLLALT
Sbjct:   300 VESTGAFVAVSRYASATMLPPSILSRGIGWQGVAILISGLFGTGAGSSVSVENAGLLALT 359

Query:   359 RVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYV 405
             RVGSRRVVQI+AGFMIFFS+LGKFGAVFASIPAPI+AALYCLFFAYV
Sbjct:   360 RVGSRRVVQIAAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYV 406

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR\|locus:2158829 AT5G49990 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2202700 NAT7 "nucleobase-ascorbate transporter 7" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2194631 NAT8 "nucleobase-ascorbate transporter 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2031085 AT1G49960 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040874 AT2G34190 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2034104 AT1G65550 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2060076 AT2G05760 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2066190 PDE135 "pigment defective embryo 135" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2145507 AT5G25420 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		421
COG2233		451	COG2233, UraA, Xanthine/uracil permeases [Nucleoti	4e-43
pfam00860		389	pfam00860, Xan_ur_permease, Permease family	4e-42
TIGR03173		406	TIGR03173, pbuX, xanthine permease	1e-38
TIGR00801		412	TIGR00801, ncs2, uracil-xanthine permease	6e-28
PRK10720		428	PRK10720, PRK10720, uracil transporter; Provisiona	8e-13
TIGR03616		429	TIGR03616, RutG, pyrimidine utilization transport	1e-08
PRK11412		433	PRK11412, PRK11412, putative uracil/xanthine trans	8e-08

>gnl\|CDD\|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]	Back alignment and domain information

 Score =  156 bits (397), Expect = 4e-43
 Identities = 103/390 (26%), Positives = 169/390 (43%), Gaps = 58/390 (14%)

Query: 31  PPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL 90
             P  + +LLG QH + M G TVL+P  +   +G   E+ A +I   L  +G+ TLLQ L
Sbjct: 12  RLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLL 71

Query: 91  ----FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTL 146
                G+ LP+ +G S+ FV   I+I                    + A+ G +I A  +
Sbjct: 72  GTGPGGSGLPSYLGSSFAFVAPMIAIGGT-------------TGDGIAALLGGIIAAGLV 118

Query: 147 QIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGL------YEFGFPGVAKCVEIGLPQ--- 197
             ++      R + R   P+   P++ ++G  L         G PG A   + G  +   
Sbjct: 119 YFLISPIVKIR-LARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDFGSLENLG 177

Query: 198 -----LVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQ 252
                L+II+ I+++       GK    R  ++  +V+ ++ A  +       D +    
Sbjct: 178 LALVTLLIILLINRF-------GKGFLRRIPILIGLVVGYLLALFM----GMVDFSG--- 223

Query: 253 ASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYA 312
                     +  APW  +P PF +G  +FD G    M+  + V +VE TG   A     
Sbjct: 224 ----------VAEAPWFALPTPFYFG-MAFDWGAILTMLPVAIVTIVEHTGDITATGEIT 272

Query: 313 SATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGF 372
                    L RG+   G+  L++GLFG     +   +N G++ALT V SR V+  +A  
Sbjct: 273 GRDLDGKPRLRRGLLADGLATLIAGLFGGF-PNTTFAQNIGVVALTGVYSRYVIAGAAVI 331

Query: 373 MIFFSVLGKFGAVFASIPAPIVAALYCLFF 402
           +I   +  KFGA+  SIP+P++     + F
Sbjct: 332 LILLGLFPKFGALIQSIPSPVLGGAMLVLF 361

Length = 451

>gnl\|CDD\|216158 pfam00860, Xan_ur_permease, Permease family	Back alignment and domain information

>gnl\|CDD\|234136 TIGR03173, pbuX, xanthine permease	Back alignment and domain information

>gnl\|CDD\|233133 TIGR00801, ncs2, uracil-xanthine permease	Back alignment and domain information

>gnl\|CDD\|236744 PRK10720, PRK10720, uracil transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|132655 TIGR03616, RutG, pyrimidine utilization transport protein G	Back alignment and domain information

>gnl\|CDD\|183124 PRK11412, PRK11412, putative uracil/xanthine transporter; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		421
COG2233		451	UraA Xanthine/uracil permeases [Nucleotide transpo	100.0
KOG1292		510	consensus Xanthine/uracil transporters [Nucleotide	100.0
PRK11412		433	putative uracil/xanthine transporter; Provisional	100.0
PRK10720		428	uracil transporter; Provisional	100.0
TIGR03616		429	RutG pyrimidine utilization transport protein G. T	100.0
PF00860		389	Xan_ur_permease: Permease family; InterPro: IPR006	100.0
TIGR00801		415	ncs2 uracil-xanthine permease. NCS2 family appears	100.0
TIGR03173		406	pbuX xanthine permease. All the seed members of th	100.0
COG2252		436	Xanthine/uracil/vitamin C permease [Nucleotide tra	100.0
TIGR00843		395	benE benzoate transporter. The benzoate transporte	99.96
PF03594		378	BenE: Benzoate membrane transport protein; InterPr	99.95
COG0659		554	SUL1 Sulfate permease and related transporters (MF	99.94
COG3135		402	BenE Uncharacterized protein involved in benzoate	99.93
PRK11660		568	putative transporter; Provisional	99.9
TIGR00815		563	sulP high affinity sulphate transporter 1. (2) SO4	99.88
PF00916		280	Sulfate_transp: Sulfate transporter family; InterP	99.67
KOG0236		665	consensus Sulfate/bicarbonate/oxalate exchanger SA	99.58
TIGR00834		900	ae anion exchange protein. They preferentially cat	98.66
KOG1172		876	consensus Na+-independent Cl/HCO3 exchanger AE1 an	98.36
PF11840		492	DUF3360: Protein of unknown function (DUF3360); In	97.7
PF00955		510	HCO3_cotransp: HCO3- transporter family Only parti	97.17
TIGR00815		563	sulP high affinity sulphate transporter 1. (2) SO4	82.69

>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=9e-63  Score=494.30  Aligned_cols=357  Identities=28%  Similarity=0.483  Sum_probs=329.4

Q ss_pred             CcccccCCCCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hCCCccee
Q 014618           23 SISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL----FGTRLPAV   98 (421)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~----~G~rlPiv   98 (421)
                      +.....|||+|++|.+++|+||+++|+.+.+++|++++++.+++++|+.++++++++.||++|++|.+    +|.|+|.+
T Consensus         4 ~~~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~   83 (451)
T COG2233           4 LIYVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSY   83 (451)
T ss_pred             cccCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCee
Confidence            34556788889999999999999999999999999999999999999999999999999999999997    46699999


Q ss_pred             eecccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhccCccchHHHHHHHHh
Q 014618           99 MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWR-NVTRFLSPLSVVPLISLVGF  177 (421)
Q Consensus        99 ~gps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~gl~~-~l~~~iPp~V~g~~l~~IGl  177 (421)
                      +|+||+++.+++++.++++             .+.+.++|+++++|+++++++..  ++ |++|+|||.|+|.+++.||+
T Consensus        84 lG~sFafi~p~i~~~~~~g-------------~~~~~~~G~ii~ag~~~~li~~~--~~~~l~rlfPPvVtG~Vi~~IGl  148 (451)
T COG2233          84 LGSSFAFVAPMIAIGGTTG-------------DGIAALLGGIIAAGLVYFLISPI--VKIRLARLFPPVVTGPVVLVIGL  148 (451)
T ss_pred             EechHHHHHHHHHHHhccC-------------CchHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCCceEEeEeeeehh
Confidence            9999999999988876543             25899999999999999999976  46 99999999999999999999


Q ss_pred             HhhhhhcCCccc--------------hhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCC
Q 014618          178 GLYEFGFPGVAK--------------CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGA  243 (421)
Q Consensus       178 ~l~~~~~~~~~~--------------~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~  243 (421)
                      +|.+.+++++.+              +..+++.+++++++++++.|+       ++|+.++|+|+++||++++.+|.   
T Consensus       149 sL~~vai~~~~G~~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~g-------~~~~i~ILiGlv~G~~la~~~G~---  218 (451)
T COG2233         149 SLAPVAINMAGGGPGAAGNPDFGSLENLGLALVTLLIILLINRFGKG-------FLRRIPILIGLVVGYLLALFMGM---  218 (451)
T ss_pred             hhHHHHHHHhhCCCCCCCCcccCchhHHHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHHHHhCC---
Confidence            999998865431              456888888888888888766       58899999999999999999984   


Q ss_pred             CCCCCcccccccccCccCcCCCCCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCC
Q 014618          244 YNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLS  323 (421)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~  323 (421)
                                   +|++. +.++||+++|.+++|++ +|||.+++.+++++++.+.|++|++.+.++.++++..++++++
T Consensus       219 -------------vdf~~-v~~a~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~  283 (451)
T COG2233         219 -------------VDFSG-VAEAPWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLR  283 (451)
T ss_pred             -------------cCccc-cccCceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccc
Confidence                         47776 78999999999999998 9999999999999999999999999999999998766679999


Q ss_pred             cceehhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHH
Q 014618          324 RGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFA  403 (421)
Q Consensus       324 r~l~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g  403 (421)
                      |++++||++++++|+||++|.|+|+ ||+|+++.||+.||++...+++++++++++||+++++++||.||+||+.+++||
T Consensus       284 rg~~aDGlat~iag~fg~~p~Ttfa-qNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG  362 (451)
T COG2233         284 RGLLADGLATLIAGLFGGFPNTTFA-QNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFG  362 (451)
T ss_pred             cceeeccHHHHHHHhcCCCCCCchh-hceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHH
Confidence            9999999999999999999999999 999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhHhcCCCC
Q 014618          404 YVLEVLASFSSVTSTVS  420 (421)
Q Consensus       404 ~i~~~gi~~i~~~d~~~  420 (421)
                      ++..+|+|++...|+|.
T Consensus       363 ~Ia~sGir~l~~~~~~~  379 (451)
T COG2233         363 MIAASGIRILIRNKVDR  379 (451)
T ss_pred             HHHHHHHHHHHhccccc
Confidence            99999999999999876

>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK11412 putative uracil/xanthine transporter; Provisional	Back alignment and domain information

>PRK10720 uracil transporter; Provisional	Back alignment and domain information

>TIGR03616 RutG pyrimidine utilization transport protein G	Back alignment and domain information

>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []	Back alignment and domain information

>TIGR00801 ncs2 uracil-xanthine permease	Back alignment and domain information

>TIGR03173 pbuX xanthine permease	Back alignment and domain information

>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]	Back alignment and domain information

>TIGR00843 benE benzoate transporter	Back alignment and domain information

>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]	Back alignment and domain information

>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PRK11660 putative transporter; Provisional	Back alignment and domain information

>TIGR00815 sulP high affinity sulphate transporter 1	Back alignment and domain information

>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related	Back alignment and domain information

>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00834 ae anion exchange protein	Back alignment and domain information

>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised	Back alignment and domain information

>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells	Back alignment and domain information

>TIGR00815 sulP high affinity sulphate transporter 1	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		421
3qe7_A		429	Crystal Structure Of Uracil Transporter--Uraa Lengt		3e-08

>pdb|3QE7|A Chain A, Crystal Structure Of Uracil Transporter--Uraa Length = 429

Back alignment and structure

Iteration: 1

Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 5/148 (3%) Query: 261 GLIDAAPWIRVPW---PFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPM 317 G++D P I W P + P F+ ++ A+ V + E G A + Sbjct: 200 GIVDTTPIINAHWFALPTLY-TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLL 258 Query: 318 PPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFS 377 L R + G+ ++SG FG+ T+ EN G++A+TRV S V+ +A F I S Sbjct: 259 RDPGLHRSMFANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIFAILLS 317 Query: 378 VLGKFGAVFASIPAPIVAALYCLFFAYV 405 +GK A IP P++ + L + + Sbjct: 318 CVGKLAAAIQMIPLPVMGGVSLLLYGVI 345

PyMOL of 3qe7

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		421
3qe7_A		429	Uracil permease; uracil transporter, URAA, transpo	3e-39

>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429	Back alignment and structure

 Score =  144 bits (366), Expect = 3e-39
 Identities = 79/382 (20%), Positives = 137/382 (35%), Gaps = 80/382 (20%)

Query: 32  PPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL- 90
           PP  + I L  QH   M G TVL     VP +   N        T+L   G+ TLL    
Sbjct: 12  PPLLQTIPLSLQHLFAMFGATVL-----VPVLFHIN------PATVLLFNGIGTLLYLFI 60

Query: 91  FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVL 150
              ++PA +G S+ F+   + ++  G                     G  I+   L  ++
Sbjct: 61  CKGKIPAYLGSSFAFISPVLLLLPLG----------------YEVALGGFIMCGVLFCLV 104

Query: 151 GF---SGLWRNVTRFLSPLSVVPLISLVGFGL-----------YEFGFPGVAKCVEIGLP 196
            F         +     P ++  +++++G  L              G    +K + I + 
Sbjct: 105 SFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISIT 164

Query: 197 QLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCR 256
            L + V  S          +       ++  V++ +  +  +                  
Sbjct: 165 TLAVTVLGSVL-------FRGFLAIIPILIGVLVGYALSFAM------------------ 199

Query: 257 TDRAGLID-----AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARY 311
               G++D      A W  +P  +    P F+      ++ A+ V + E  G     A  
Sbjct: 200 ----GIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANI 252

Query: 312 ASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAG 371
                +    L R +   G+  ++SG FG+   T+   EN G++A+TRV S  V+  +A 
Sbjct: 253 VKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAI 311

Query: 372 FMIFFSVLGKFGAVFASIPAPI 393
           F I  S +GK  A    IP P+
Sbjct: 312 FAILLSCVGKLAAAIQMIPLPV 333

PyMOL of 3qe7

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		421
3qe7_A		429	Uracil permease; uracil transporter, URAA, transpo	100.0

>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}	Back alignment and structure

Probab=100.00  E-value=2.3e-59  Score=477.18  Aligned_cols=344  Identities=22%  Similarity=0.375  Sum_probs=305.7

Q ss_pred             CCcccccCCCCChHHHHHHHHHHHHHHhcceehhhhHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHh-CCCcceeee
Q 014618           22 PSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLF-GTRLPAVMG  100 (421)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~Glq~~l~m~~~~v~~p~il~~a~gl~~~~~~~~i~a~~~~~gi~tllq~~~-G~rlPiv~g  100 (421)
                      .|+.|++|||+|+++++.+|+||+++|+++++++|+++    |+|++       +++++||++|++|+++ |+|+|.++|
T Consensus         2 ~~~~~~~~~~~~~~~~i~~GlQh~lam~~~~v~~Plil----Gl~~~-------~~l~~agi~Tllq~~~~~~~lP~~~G   70 (429)
T 3qe7_A            2 TRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINPA-------TVLLFNGIGTLLYLFICKGKIPAYLG   70 (429)
T ss_dssp             --CCBCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----TSCHH-------HHHHHHHHHHHHHHHHTTTCCCCCEE
T ss_pred             CCcccCcccCCCHHHHHHHHHHHHHHHHHHHHHhHHHh----CCCHH-------HHHHHHHHHHHHHHHHcCCCCCeEec
Confidence            46889999999999999999999999999999999996    88873       8999999999999986 899999999


Q ss_pred             cccchHHHHHHHHHhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhh--hhh-hhhhhccCccchHHHHHHHHh
Q 014618          101 GSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS--GLW-RNVTRFLSPLSVVPLISLVGF  177 (421)
Q Consensus       101 ps~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ga~lv~Gll~~llg~~--gl~-~~l~~~iPp~V~g~~l~~IGl  177 (421)
                      +||+|++++..+.+                ++|++++|+++++|+++++++++  |++ +|++|+|||.|+|.+++.||+
T Consensus        71 ~sfafi~~~~~i~~----------------~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl  134 (429)
T 3qe7_A           71 SSFAFISPVLLLLP----------------LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGL  134 (429)
T ss_dssp             ECGGGHHHHHHHGG----------------GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHh----------------cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHH
Confidence            99999998776643                26999999999999999999988  664 799999999999999999999


Q ss_pred             HhhhhhcCCcc-----------chhhchHHHHHHHHHHHHHhhhhhhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014618          178 GLYEFGFPGVA-----------KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYND  246 (421)
Q Consensus       178 ~l~~~~~~~~~-----------~~~~v~~~~l~~~~~l~~~~~~~~~~~~~~~~~~aiLigiv~g~~~a~~~g~~~~~~~  246 (421)
                      ++.+.++++.+           .++.+++.+++++++++++.|+       ++|++++|+|+++||++++.+|..     
T Consensus       135 ~l~~~~~~~~~~~~~~~~~~~~~~~~la~~tl~iii~~~~~~kg-------~~~~~aiLigivvg~~~a~~~G~~-----  202 (429)
T 3qe7_A          135 ELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRG-------FLAIIPILIGVLVGYALSFAMGIV-----  202 (429)
T ss_dssp             HHHHHHHHHHTSSCBTTBCCCHHHHHHHHHHHHHHHHHHHSSST-------TTTTHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHhccccCCCCccccHHHHHHHHHHHHHHHHHHHHhcc-------cchhhHHHHHHHHHHHHHHHhcCC-----
Confidence            99887664321           2567888888888777666554       578999999999999999999863     


Q ss_pred             CCcccccccccCccCcCCCCCceecCCCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCccCCcce
Q 014618          247 AAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGV  326 (421)
Q Consensus       247 ~~~~~~~~~~~~~~~~i~~~~~~~~P~~~~~~~p~f~~~~i~~~~~~~lv~~~es~g~~~a~~~~~~~~~~~~~~~~r~l  326 (421)
                                 |++. +.+++|+++|.   |..|+||++.+..++++++++++|+++++.++++..+++..++++.||++
T Consensus       203 -----------d~~~-v~~a~~~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l  267 (429)
T 3qe7_A          203 -----------DTTP-IINAHWFALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSM  267 (429)
T ss_dssp             -----------TSSH-HHHSCSSCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHH
T ss_pred             -----------Cccc-ccccccccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHH
Confidence                       4432 45678999884   56789999999999999999999999999999999986554678999999


Q ss_pred             ehhhhHHHHhhhcCCCCCCcccccchhhhhhccCCchhHHHHHHHHHHHHHhhhHHHHHHhhCChHHHHHHHHHHHHHHH
Q 014618          327 GWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVL  406 (421)
Q Consensus       327 ~~~Gl~~i~sgl~G~~~~t~~~~~n~g~i~~tg~~sr~~~~~a~~~ll~l~~~p~~~~l~~~IP~avlggvll~~~g~i~  406 (421)
                      .+||++|+++|+||++|.|+|+ ||+|.+..||++||++...+|+++++++++||++++++.||.+|+||+++++||++.
T Consensus       268 ~adGla~i~~glfGg~p~Tt~~-en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~lfg~i~  346 (429)
T 3qe7_A          268 FANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIG  346 (429)
T ss_dssp             HHHHHHHHHHHHHTCCCEEECH-HHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCcchHH-HhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999 999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHh--HhcCCCC
Q 014618          407 EVLASFS--SVTSTVS  420 (421)
Q Consensus       407 ~~gi~~i--~~~d~~~  420 (421)
                      .+|+|++  +..|+++
T Consensus       347 ~~Gi~~l~~~~v~~~~  362 (429)
T 3qe7_A          347 ASGIRVLIESKVDYNK  362 (429)
T ss_dssp             HHHHHHHHHTTSCTTS
T ss_pred             HHHHHHHHhcCCCCCC
Confidence            9999999  7778764

PyMOL of 3qe7

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00