Citrus Sinensis ID: 014631

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-
Protein Sequence
MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccHHHHHHHHHHHccccccccEEEcccccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHcccEEEEEEccccccccccHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccEEEEcccccccccccccccHHcccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHccEEEEccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHcccEEEEccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccHHHEEEEcHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHcccEEEEEEccHHHcccccHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHHHHccEEEEEccccccEcccccEEEEEEccccccEEEEEEcccccccHHHccEEEEEEccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccEccccEccEEEEEEcHHHEcccccHHHHHHHHHHHHcEEcEEHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHEHcc
Coil and Loop (DISEMBL)
mesgavkkkwgfqvkqeHITATATLTVRSALTIIKQNlkendprpiiplghgdpsafpcfrttpvaADAVVDAVRSaefdcyspsvgilPARRAIADYLnselpcklspddvyltAGCKQAIQVILTVLarpganillpkpgfplyeanARHTRLEirhfdllpekgwevdLDGLEALADENTVAMVIVnpgnpcgnvfTYQQLQKIAEKARKLGIMVISDevydhltfgstpyvrmgvfgsTVPVItlgsmskrwivpgwrlgwlvtsdpsgilqELRIVDSIKGylnissgpatfvqgavpqifkntkEDFFSKIVDILRDTADICYdrikeipcitcprkpegsmFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ
Flexible Loop (DISEMBL)
mesgavkkkwgfqvkqehitatatltvRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFdcyspsvgilPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEipcitcprkpeGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ
Low Complexity Region (SEG)
MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPvaadavvdavRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ
Disordered region (IsUnstruct)
********KWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC*******
Disordered Region (DISOPRED)
**********************ATLTVRSALTIIK******DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF*QRH****
Disordered Region (DISEMBL)
*********WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF********
Disordered Region (DISPRO)
********KWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	421	2.2.26 [Sep-21-2011]
Q9FN30	414	Probable aminotransferase	yes	no	0.954	0.971	0.595	1e-146
Q9LVY1	420	Tyrosine aminotransferase	no	no	0.990	0.992	0.573	1e-146
Q9ST03	551	Nicotianamine aminotransf	N/A	no	0.980	0.749	0.572	1e-143
Q9ST02	461	Nicotianamine aminotransf	N/A	no	0.997	0.911	0.560	1e-141
Q9SIV0	462	S-alkyl-thiohydroximate l	no	no	0.973	0.887	0.523	1e-138
Q67Y55	449	Probable aminotransferase	no	no	0.973	0.913	0.503	1e-125
Q9SK47	445	Probable aminotransferase	no	no	0.969	0.916	0.480	1e-114
Q9SUR6	422	Cystine lyase CORI3 OS=Ar	no	no	0.881	0.879	0.451	4e-99
Q8VYP2	424	Probable aminotransferase	no	no	0.850	0.844	0.469	9e-99
Q8QZR1	454	Tyrosine aminotransferase	yes	no	0.947	0.878	0.362	1e-78

>sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2 OS=Arabidopsis thaliana GN=At5g53970 PE=2 SV=1

 Score =  520 bits (1338), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 241/405 (59%), Positives = 317/405 (78%), Gaps = 3/405 (0%)

Query: 20  TATATLTVRSALTIIKQNL---KENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS 76
           T T+T+T++  L+++ +++   ++   + +I LG GDP+ + CFRTT V+  AV D++ S
Sbjct: 6   TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQAVSDSLLS 65

Query: 77  AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANI 136
            +F  YSP+VG+  ARRAIA+YL+ +LP KLS DDV++T+GC QAI V L++LARP ANI
Sbjct: 66  NKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSMLARPRANI 125

Query: 137 LLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCG 196
           LLP+PGFP+YE  A+   LE+R+ DLLPE GWE+DLD +EALADENTVA+V++NPGNPCG
Sbjct: 126 LLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVINPGNPCG 185

Query: 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256
           NV++YQ L KIAE A+KLG +VI+DEVY HL FGS P+V MGVFGS VPV+TLGS+SKRW
Sbjct: 186 NVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRW 245

Query: 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSK 316
           IVPGWRLGW VT+DPSG  ++ +I++  K Y +I  GPATF+Q AVP I + T E FF K
Sbjct: 246 IVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAVPTILEQTDESFFKK 305

Query: 317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376
            ++ L++++DIC D IKEIPCI    +PEGSM +MVKLNLSLLE +SDD++F  +LA+EE
Sbjct: 306 TLNSLKNSSDICCDWIKEIPCIDSSHRPEGSMAMMVKLNLSLLEDVSDDIDFCFKLAREE 365

Query: 377 SVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
           SVI+LPG AVG+KNWLRITFA + +++EE   RIK F  RHAK Q
Sbjct: 366 SVILLPGTAVGLKNWLRITFAADATSIEEAFKRIKCFYLRHAKTQ 410

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: -

>sp|Q9LVY1|TAT_ARATH Tyrosine aminotransferase OS=Arabidopsis thaliana GN=TAT PE=2 SV=1

 Score =  520 bits (1338), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 241/420 (57%), Positives = 321/420 (76%), Gaps = 3/420 (0%)

Query: 2   ESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFR 61
           E+GA  K+W F    E +  + +LT+R  L  +   L   D RP+IPLGHGDPS FP FR
Sbjct: 3   ENGA--KRWNFGA-NEVVERSNSLTIRDYLNTLINCLDGGDVRPVIPLGHGDPSPFPSFR 59

Query: 62  TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121
           T   A +A+ DAVRS +F+ YS S G+  AR+A+A+YL+S+L  ++SP+DV++TAGC QA
Sbjct: 60  TDQAAVEAICDAVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQA 119

Query: 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE 181
           I+++++ LA PGANILLP+P +P+Y++ A   +LE+R+FDLLPE GW+VDLDG+EALAD+
Sbjct: 120 IEILISALAIPGANILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADD 179

Query: 182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241
            TVA++++NP NPCGNVF+ Q LQKIAE A KLGI+VI+DEVYDH  FG  P+V M  F 
Sbjct: 180 KTVAILVINPCNPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFA 239

Query: 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGA 301
             VPVI LG++SKRW VPGWRLGW+VT DP GI+++   V ++   +N+S+ PATF+QGA
Sbjct: 240 ELVPVIVLGAISKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQGA 299

Query: 302 VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361
           +P I  NTKE+FFS  +++++  A+ICY+ + +IPCITCP KPEGSMF MVKLN SLLE 
Sbjct: 300 MPDIIGNTKEEFFSSKLEMVKKCAEICYEELMKIPCITCPCKPEGSMFTMVKLNFSLLED 359

Query: 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
           ISDD++F  +LAKEES+I+LPG AVG+KNWLRITFA+E   L EG  R+K F +RH+K Q
Sbjct: 360 ISDDLDFCSKLAKEESMIILPGQAVGLKNWLRITFAVELELLIEGFSRLKNFTERHSKNQ 419

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using L-glutamate in vitro. Can convert phenylalanine to phenylpyruvate and catalyze the reverse reaction in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ST03|NAATB_HORVU Nicotianamine aminotransferase B OS=Hordeum vulgare GN=naat-B PE=1 SV=2

 Score =  507 bits (1306), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/416 (57%), Positives = 316/416 (75%), Gaps = 3/416 (0%)

Query: 9   KWGFQVKQEHITAT--ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVA 66
           +W F   ++ + A   A +++R+    I  +++E  PRP++PL HGDPS FP FRT   A
Sbjct: 131 EWNFAGAKDGVLAATGANMSIRAIRYKISASVQEKGPRPVLPLAHGDPSVFPAFRTAVEA 190

Query: 67  ADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVIL 126
            DAV  AVR+ +F+CY   VG+  AR A+A++L+  +P  LS DDV+LTAG  QAI+VI+
Sbjct: 191 EDAVAAAVRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVII 250

Query: 127 TVLAR-PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185
            VLA+  GANILLP+PG+P YEA A   RLE+RHFDL+P+KGWE+D+D LE++AD+NT A
Sbjct: 251 PVLAQTAGANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTA 310

Query: 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245
           MVI+NP NPCG+V++Y  L K+AE A++LGI+VI+DEVY  L  GS P++ MGVFG   P
Sbjct: 311 MVIINPNNPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITP 370

Query: 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI 305
           V+++GS+SK WIVPGWRLGW+   DP  ILQE +I  SI  YLN+S+ PATF+Q A+PQI
Sbjct: 371 VLSIGSLSKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAALPQI 430

Query: 306 FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDD 365
            +NTKEDFF  I+ +L+++++ICY +IKE   ITCP KPEGSMFVMVKLNL LLE I DD
Sbjct: 431 LENTKEDFFKAIIGLLKESSEICYKQIKENKYITCPHKPEGSMFVMVKLNLHLLEEIDDD 490

Query: 366 MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
           ++F  +LAKEESVI+ PG  +GM NW+RITFA  PS+L++GLGRIK+FCQR+ K+ 
Sbjct: 491 IDFCCKLAKEESVILCPGSVLGMANWVRITFACVPSSLQDGLGRIKSFCQRNKKRN 546

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9ST02|NAATA_HORVU Nicotianamine aminotransferase A OS=Hordeum vulgare GN=naat-A PE=1 SV=2

 Score =  502 bits (1293), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 237/423 (56%), Positives = 321/423 (75%), Gaps = 3/423 (0%)

Query: 2   ESGAVKKKWGFQVKQEHITAT--ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPC 59
            + A   +W F   ++ I AT  A  ++R+    I  +++E+ PRP++PL HGDPS FP 
Sbjct: 34  HAAAAAVEWNFARGKDGILATTGAKNSIRAIRYKISASVEESGPRPVLPLAHGDPSVFPA 93

Query: 60  FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119
           FRT   A DAV  A+R+ +F+CY+  VG+  AR A+A++L+  +P KLS DDV+LTAG  
Sbjct: 94  FRTAVEAEDAVAAALRTGQFNCYAAGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAGGT 153

Query: 120 QAIQVILTVLAR-PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178
           QAI+VI+ VLA+  GANILLP+PG+P YEA A   +LE+RHFDL+P+KGWE+D+D LE++
Sbjct: 154 QAIEVIIPVLAQTAGANILLPRPGYPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLESI 213

Query: 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238
           AD+NT AMVI+NP NPCG+V++Y  L K+AE ARKLGI+VI+DEVY  L  GS P++ MG
Sbjct: 214 ADKNTTAMVIINPNNPCGSVYSYDHLAKVAEVARKLGILVIADEVYGKLVLGSAPFIPMG 273

Query: 239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFV 298
           VFG   PV+++GS+SK WIVPGWRLGW+   DP+ IL++ +I  SI  YLN+S+ PATFV
Sbjct: 274 VFGHIAPVLSIGSLSKSWIVPGWRLGWVAVYDPTKILEKTKISTSITNYLNVSTDPATFV 333

Query: 299 QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL 358
           Q A+P+I +NTK DFF +I+ +L+++++ICY  IKE   ITCP KPEGSMFVMVKLNL L
Sbjct: 334 QEALPKILENTKADFFKRIIGLLKESSEICYREIKENKYITCPHKPEGSMFVMVKLNLHL 393

Query: 359 LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
           LE I DD++F  +LAKEESVI+ PG  +GM+NW+RITFA  PS+L++GL R+K+FCQR+ 
Sbjct: 394 LEEIHDDIDFCCKLAKEESVILCPGSVLGMENWVRITFACVPSSLQDGLERVKSFCQRNK 453

Query: 419 KQQ 421
           K+ 
Sbjct: 454 KKN 456

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9SIV0|SUR1_ARATH S-alkyl-thiohydroximate lyase SUR1 OS=Arabidopsis thaliana GN=SUR1 PE=1 SV=1

 Score =  491 bits (1263), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 215/411 (52%), Positives = 304/411 (73%), Gaps = 1/411 (0%)

Query: 10  WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADA 69
           W F    +   A+ T+T+R  + ++  N  ++  + I+PLGHGDPS +PCFRT   A DA
Sbjct: 33  WRFGGSDKAAKAS-TVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDA 91

Query: 70  VVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL 129
           VVD +RS + + Y P  GILPARRA+ADY+N +LP KL+P+D++LTAGC Q I+++   L
Sbjct: 92  VVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESL 151

Query: 130 ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189
           ARP ANILLP+PGFP Y+A A ++ LE+R FDLLPEK WE+DL+G+EA+ADENTVAMV++
Sbjct: 152 ARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVI 211

Query: 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249
           NP NPCGNV+++  L+K+AE ARKLGIMVISDEVYD   FG  P+V MG F S VPV+TL
Sbjct: 212 NPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTL 271

Query: 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT 309
             +SK W+VPGW++GW+  +DP G+ +  +++ SIK  L+++  PAT +Q A+P I +  
Sbjct: 272 AGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA 331

Query: 310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
            ++FF+K   IL+   D+  DR+K+IPC+ CP+KPE   +++ KL LSL++ I DD++F 
Sbjct: 332 DKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFC 391

Query: 370 LQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           ++LA+EE+++ LPG A+G+KNW+RIT  +E   LE+ L R+K FC RHAK+
Sbjct: 392 VKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442

C-S lyase involved in glucosinolate biosynthesis. Converts S-(alkylacetohydroximoyl)-L-cysteine to thiohydroximate. Functions in auxin homeostasis. Probably required for glucosinolate activation in response to pathogens.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q67Y55|TAT1_ARATH Probable aminotransferase TAT1 OS=Arabidopsis thaliana GN=At4g28420 PE=2 SV=1

 Score =  449 bits (1156), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 207/411 (50%), Positives = 295/411 (71%), Gaps = 1/411 (0%)

Query: 10  WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADA 69
           W F+   ++    +++T+R  +  +      +  +P++PL HGDPS +PC+RT+ +  +A
Sbjct: 27  WRFR-GSDNAAKASSVTMRVIVYKLFDECSLDVKKPLLPLAHGDPSVYPCYRTSILVENA 85

Query: 70  VVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL 129
           VVD +RS + + Y P+ GILPAR+A+ADY+N +L  K+ P+DV++T GC Q I+V+L  L
Sbjct: 86  VVDVLRSGKGNSYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSL 145

Query: 130 ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189
           ARP ANILLP+P +P YEA A ++ LE+R FDLLPEK WE+DL G+EA+ADENTVAMVI+
Sbjct: 146 ARPNANILLPRPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVII 205

Query: 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249
           NP NPCGNV++Y  L+K+AE A+KLGIMVI+DEVY    FG  P+V MG F S  PVITL
Sbjct: 206 NPNNPCGNVYSYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITL 265

Query: 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT 309
           G +SK WIVPGWR+GW+  +DP GIL+   +V SI+  L+I+    T VQ A+P+I    
Sbjct: 266 GGISKGWIVPGWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQAALPEILGKA 325

Query: 310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
            ++ F+K   +L+   ++  DR+KEIPC+ C +KPE   +++ KL L LLE I DDM+F 
Sbjct: 326 NKELFAKKNSMLKQNVELVCDRLKEIPCLVCNKKPESCTYLLTKLKLPLLEDIEDDMDFC 385

Query: 370 LQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           ++LAKEE++++LPG+A+G+KNW+RIT  +E   LE+ L R+  FC+RH K+
Sbjct: 386 MKLAKEENLVLLPGVALGLKNWIRITIGVEAQMLEDALERLNGFCKRHLKK 436

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SK47|TAT3_ARATH Probable aminotransferase TAT3 OS=Arabidopsis thaliana GN=TAT3 PE=2 SV=1

 Score =  413 bits (1062), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/410 (48%), Positives = 279/410 (68%), Gaps = 2/410 (0%)

Query: 10  WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADA 69
           W F+       A A    + A  + K N   N  + I+    G+PSA   FRT P A +A
Sbjct: 16  WRFKGNGATSDAAAVTLRKLAFGMFK-NCTMNSGKTILFPTPGEPSAHSNFRTCPEAEEA 74

Query: 70  VVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL 129
           V  A RS   + Y+PS G+  ARRA+A+YLN ELP KL  +DVY+T GC QAI++++  L
Sbjct: 75  VAAAARSGMANSYAPSPGVFKARRAVAEYLNGELPTKLKAEDVYITGGCNQAIEIVIDSL 134

Query: 130 A-RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI 188
           A  P ANILLP+PG+P Y+A A ++ LEIR +DLLPE  WE++LDGLEA ADENTVAMVI
Sbjct: 135 AGNPSANILLPRPGYPHYDARAVYSGLEIRKYDLLPESDWEINLDGLEAAADENTVAMVI 194

Query: 189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248
           +NP NPCGNV+TY  L K+AE ARKLGIM+ISDEVYDH+ +G  P++ MG F S  PVIT
Sbjct: 195 INPNNPCGNVYTYDHLNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASIAPVIT 254

Query: 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKN 308
           LGS+SK W+ PGWR+GW+  +DP+GI     +V +I+ +L+++  P+  +Q A+P I + 
Sbjct: 255 LGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQAIEDFLDLTPQPSFILQEALPDILEK 314

Query: 309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF 368
           T ++FF K +  +R   ++  +R+K+IPC+ CP+KPE   ++ +KL+ S+L  I +D +F
Sbjct: 315 TPKEFFEKKIKAMRRNVELSCERLKDIPCLFCPKKPESCSYLWLKLDTSMLNNIKNDFDF 374

Query: 369 ALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
             +L  EES+I++PG+A+G +NW+RI+   + S ++E   R+K F  RHA
Sbjct: 375 CTKLVSEESLILIPGVALGAENWVRISIGTDESVVQEIFDRLKGFYDRHA 424

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SUR6|CORI3_ARATH Cystine lyase CORI3 OS=Arabidopsis thaliana GN=CORI3 PE=1 SV=1

 Score =  362 bits (928), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 169/374 (45%), Positives = 245/374 (65%), Gaps = 3/374 (0%)

Query: 51  HGDPSAFP---CFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKL 107
           HG P   P      T+  A  AVV AV     + Y+PS+G+  A+ A+A+YLN  LP KL
Sbjct: 39  HGKPILPPRNEILETSNTAEKAVVKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKL 98

Query: 108 SPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG 167
           + DDV++T GCKQAI++ + +LA+P AN+LLP PGFP     + +  LE+RH++ LPEK 
Sbjct: 99  TADDVFMTLGCKQAIELAVDILAKPKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEKN 158

Query: 168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL 227
           +E+D D + AL DENT A+ I+NP NP GN ++   L+++AE A++L IMV+SDEV+   
Sbjct: 159 FEIDFDSVRALVDENTFAIFIINPHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRWT 218

Query: 228 TFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY 287
            FGS P+V MG F S VPV+TLGS+SK W VPGWR GWL   D  G+ +  +++ + + +
Sbjct: 219 LFGSNPFVPMGKFSSIVPVVTLGSISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQDF 278

Query: 288 LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS 347
           L I++ P T +Q A+P I + T ++FF K    L+D  +  Y ++K IP +TC  KPE  
Sbjct: 279 LQINNNPPTVIQAAIPDILEKTPQEFFDKRQSFLKDKVEFGYSKLKYIPSLTCYMKPEAC 338

Query: 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGL 407
            F+  +L+LS    I DD +F  +LAKEE+++VLPG+A   KNWLR +  +E   LE+ L
Sbjct: 339 TFLWTELDLSSFVDIEDDQDFCNKLAKEENLVVLPGIAFSQKNWLRHSIDMETPVLEDAL 398

Query: 408 GRIKAFCQRHAKQQ 421
            R+K+FC RH+ ++
Sbjct: 399 ERLKSFCDRHSNKK 412

Possesses cystine lyase and tyrosine aminotransferase activities in vitro. May be required for the synthesis of homogentisate a precursor of tocopherols and plastoquinones.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VYP2|TAT4_ARATH Probable aminotransferase TAT4 OS=Arabidopsis thaliana GN=At4g23590 PE=2 SV=1

 Score =  360 bits (925), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 168/358 (46%), Positives = 241/358 (67%)

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
            T+  A  AVV AV     + Y+PS+G+  A+RA+A+YLN +L  KL+ DDVY+T GCKQ
Sbjct: 52  ETSHTAEKAVVKAVLCGTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQ 111

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI++ +++LA+P ANILLP+PGFP    ++ +  LE+R ++ +PE+ +E+D + +  + D
Sbjct: 112 AIELAVSILAKPKANILLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVD 171

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENT A+ I+NP NP GN +T   L+++A  AR+LGIMV+SDEVY    FGS P+V MG F
Sbjct: 172 ENTFAIFIINPHNPNGNYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKF 231

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
            S VPVITLGS+SK WIVPGWR GWL   D +G+ +  +++ + K +L I+S P T +Q 
Sbjct: 232 SSIVPVITLGSISKGWIVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQA 291

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           A+P I + T +DFF K    L+D  D  Y ++K IP +TC  KPE   F+  KL+     
Sbjct: 292 AIPTILEKTPQDFFEKRGIFLKDKVDFGYSKLKNIPTLTCYMKPESCTFLWTKLDPLHFV 351

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
            I DD +F  +LAKEE+++VLPG+A G  NWLR +  +E   LE+   R+K+FC+RH+
Sbjct: 352 DIEDDHDFCRKLAKEENLVVLPGIAFGQNNWLRHSIDMETPRLEDAFERLKSFCERHS 409

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q8QZR1|ATTY_MOUSE Tyrosine aminotransferase OS=Mus musculus GN=Tat PE=1 SV=1

 Score =  293 bits (751), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 151/416 (36%), Positives = 236/416 (56%), Gaps = 17/416 (4%)

Query: 7   KKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVA 66
           K +W   V+   ++      +R+ +  +K  +K N  + +I L  GDP+ F    T P  
Sbjct: 38  KARW--NVRPSDMSNKTFNPIRAIVDNMK--VKPNPNKTVISLSIGDPTVFGNLPTDPEV 93

Query: 67  ADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNS-ELPCKLSPDDVYLTAGCKQAIQVI 125
             A+ DA+ S +++ Y+PS+G L +R  +A Y +  E P  L   DV LT+GC QAI++ 
Sbjct: 94  TQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELC 151

Query: 126 LTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185
           L VLA PG NIL+P+PGF LY   A    +E++ ++LLPEK WE+DL  LE+L DE T  
Sbjct: 152 LAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTAC 211

Query: 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245
           +V+ NP NPCG+VF+ + LQKI   A +  + +++DE+Y  + F    Y  M    + VP
Sbjct: 212 LVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVP 271

Query: 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGIL-QELRIVDSIKGYLNISS---GPATFVQGA 301
           +++ G ++KRW+VPGWRLGW++  D   I   E+R      G + +S    GP T VQGA
Sbjct: 272 ILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIR-----DGLVKLSQRILGPCTIVQGA 326

Query: 302 VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361
           +  I + T ++F+   +  L+  AD+CY  +  IP +  P +P G+M++MV + +     
Sbjct: 327 LKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQ-PVRPSGAMYLMVGIEMEHFPE 385

Query: 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH 417
             +D+EF  +L  E+SV  LP       N+ R+   +    + E   RI+ FC++H
Sbjct: 386 FENDVEFTERLIAEQSVHCLPATCFEYPNFFRVVITVPEVMMLEACSRIQEFCEQH 441

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using glutamic acid, with 2-oxoglutarate as cosubstrate (in vitro). Has no transaminase activity towards phenylalanine.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	421
224133454	418	aminotransferase family protein [Populus	0.992	1.0	0.719	0.0
225446437	419	PREDICTED: tyrosine aminotransferase [Vi	0.995	1.0	0.698	1e-178
224133458	418	aminotransferase family protein [Populus	0.990	0.997	0.710	1e-177
255553657	419	tyrosine aminotransferase, putative [Ric	0.995	1.0	0.703	1e-177
359485208	419	PREDICTED: LOW QUALITY PROTEIN: tyrosine	0.995	1.0	0.691	1e-177
224133450	417	aminotransferase family protein [Populus	0.961	0.971	0.679	1e-174
325516250	422	tyrosine aminotransferase 2 [Solanum pen	0.997	0.995	0.666	1e-171
225446435	419	PREDICTED: tyrosine aminotransferase iso	0.995	1.0	0.676	1e-168
302143330	518	unnamed protein product [Vitis vinifera]	0.995	0.808	0.676	1e-168
225446431	419	PREDICTED: tyrosine aminotransferase [Vi	0.995	1.0	0.669	1e-167

>gi|224133454|ref|XP_002328046.1| aminotransferase family protein [Populus trichocarpa] gi|222837455|gb|EEE75834.1| aminotransferase family protein [Populus trichocarpa]

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/421 (71%), Positives = 365/421 (86%), Gaps = 3/421 (0%)

Query: 1   MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
           ME+G+  KKWGFQ  +   T++A +TVR  L +++ NL + D R ++PL HGDPSAFPCF
Sbjct: 1   MENGS--KKWGFQANKSLSTSSA-VTVRGVLNVLQDNLNKEDTRQVMPLAHGDPSAFPCF 57

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           RTT VA +AVVDAVRSA+++ Y+P+VG+LPARR++AD+LN +LP KLSPDDV+LT GC Q
Sbjct: 58  RTTTVADEAVVDAVRSAKYNHYAPTVGLLPARRSVADFLNRDLPYKLSPDDVFLTLGCTQ 117

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI++ +TVLARPGANILLP+PGFP YEA A H+ LE RHFDL+PEKGWEVDLD +EALAD
Sbjct: 118 AIEITITVLARPGANILLPRPGFPYYEARAAHSHLEARHFDLIPEKGWEVDLDAVEALAD 177

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENTVAMV++NPGNPCG+V++YQ LQKIAE ARKLGIMVI+DEVY HLTFG++P+V MGVF
Sbjct: 178 ENTVAMVVINPGNPCGSVYSYQHLQKIAETARKLGIMVIADEVYGHLTFGNSPFVPMGVF 237

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
           GS VPV+TLGS+SKRWIVPGWR+GWLVTSDP+GILQE  +V+SIKG LNISS P TF+QG
Sbjct: 238 GSIVPVLTLGSISKRWIVPGWRIGWLVTSDPNGILQESGVVESIKGCLNISSDPVTFIQG 297

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           A+PQI  NT EDFF+KI +ILR+ ADICY++I++IPCIT P KPEGSMFVMVKLNLS LE
Sbjct: 298 AIPQIIDNTTEDFFTKINNILREAADICYEKIQDIPCITLPHKPEGSMFVMVKLNLSSLE 357

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           GI DDM+F L+LAKEESV++LPG AVGMKN+LRITFAIEPSALE GL R+KAF +RHAK 
Sbjct: 358 GIGDDMDFCLKLAKEESVMILPGTAVGMKNFLRITFAIEPSALEVGLERLKAFYERHAKI 417

Query: 421 Q 421
           Q
Sbjct: 418 Q 418

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446437|ref|XP_002276551.1| PREDICTED: tyrosine aminotransferase [Vitis vinifera] gi|302143331|emb|CBI21892.3| unnamed protein product [Vitis vinifera]

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 294/421 (69%), Positives = 359/421 (85%), Gaps = 2/421 (0%)

Query: 1   MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
           ME+G+ KK+WGFQ  QE +   A +T+R  L  +  NL E D RP+IPLGHGDPSAFPCF
Sbjct: 1   MENGS-KKRWGFQGNQE-LNMAAAVTIRGVLGKVMSNLSEEDNRPVIPLGHGDPSAFPCF 58

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           RTTPVA DA+ DAVRSA+F+ Y+P+VG+LPARRA+A+YL+ +LP +LSPDD+YLT GC Q
Sbjct: 59  RTTPVAEDAIADAVRSAKFNSYAPTVGLLPARRAVAEYLSRDLPYQLSPDDIYLTIGCTQ 118

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI++++ VLARPGANILLP+PGFP YEA A    LE+RHFDLLPE+GWEVDL+ ++ALAD
Sbjct: 119 AIEIMIQVLARPGANILLPRPGFPYYEARAAADNLEVRHFDLLPEQGWEVDLEAVKALAD 178

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENTVAMVIVNPGNP G+VFTY+ L+K+AE AR LGIMVISDEVY HL FGS P+V MGVF
Sbjct: 179 ENTVAMVIVNPGNPSGSVFTYEHLKKVAETARNLGIMVISDEVYGHLAFGSKPFVPMGVF 238

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
           GS VP++T+GS+SKRW+VPGWRLGWLVT+D +GIL +  +V+SI   LNISS PATF+QG
Sbjct: 239 GSIVPIVTVGSISKRWVVPGWRLGWLVTNDLNGILHKSGVVESIISCLNISSDPATFIQG 298

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           A+P+I + TKEDFFS  + ILR+ ADI +DRIK IPCITCP+KPEGSMFVMVKLNLSLLE
Sbjct: 299 AIPEILEKTKEDFFSNTISILRECADIIHDRIKGIPCITCPQKPEGSMFVMVKLNLSLLE 358

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
            I DD+EF ++L+KEESVIVLPG++VGMKNWLR+TFAI+P +LE+GLGRIKAF QRHAK+
Sbjct: 359 DIDDDVEFCMKLSKEESVIVLPGVSVGMKNWLRVTFAIDPPSLEDGLGRIKAFYQRHAKK 418

Query: 421 Q 421
           +
Sbjct: 419 E 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133458|ref|XP_002328047.1| aminotransferase family protein [Populus trichocarpa] gi|222837456|gb|EEE75835.1| aminotransferase family protein [Populus trichocarpa]

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/421 (71%), Positives = 357/421 (84%), Gaps = 4/421 (0%)

Query: 1   MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
           ME+G   +KW FQ  +  + +TA++TVR  L  + + L + D R +IPL HGDPSAFPCF
Sbjct: 1   MENGT--EKWSFQASK-GMNSTASITVRGVLNRLAETLNKEDKREVIPLAHGDPSAFPCF 57

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           RTTPVA +A+ DAVRSA+ + Y+P+VG+LPARRA ADYLN +LP KLSPDDV+LT GCKQ
Sbjct: 58  RTTPVADEAIFDAVRSAKNNHYAPTVGLLPARRAAADYLNRDLPYKLSPDDVFLTLGCKQ 117

Query: 121 AIQVILTVLAR-PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179
           AI++ +TVLA  PGAN+LLP+PGFP YEA A H+ L++RHFDLLPEKGWEVDL+ +EALA
Sbjct: 118 AIEIAVTVLAAIPGANVLLPRPGFPYYEARAAHSCLDVRHFDLLPEKGWEVDLEAVEALA 177

Query: 180 DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV 239
           DENTVAMVI+NPGNPCG+V++YQ L+K+AE AR LGIMVISDEVY HLTFGS P+V MGV
Sbjct: 178 DENTVAMVIINPGNPCGSVYSYQHLEKVAETARMLGIMVISDEVYGHLTFGSAPFVPMGV 237

Query: 240 FGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQ 299
           F STVPV+TLGS+SKRWIVPGWR+GWLVT+DP+GILQ+  IV SIK YLNISS P TF+Q
Sbjct: 238 FASTVPVLTLGSISKRWIVPGWRMGWLVTNDPNGILQDSGIVASIKDYLNISSDPPTFIQ 297

Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359
            AVPQI +NTK+ FFSKI +IL + ADICY +I++IPCI CP KPEGSMFVMVKLNL+LL
Sbjct: 298 AAVPQIIENTKDGFFSKINNILGEAADICYGKIQDIPCIICPHKPEGSMFVMVKLNLTLL 357

Query: 360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
           EGI DD++F L+LAKEESV+VLPG+AVGMKNWLRITFAIEPSALE G  R+K FCQRHAK
Sbjct: 358 EGIDDDVDFCLKLAKEESVMVLPGIAVGMKNWLRITFAIEPSALEVGFERLKVFCQRHAK 417

Query: 420 Q 420
           Q
Sbjct: 418 Q 418

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553657|ref|XP_002517869.1| tyrosine aminotransferase, putative [Ricinus communis] gi|223542851|gb|EEF44387.1| tyrosine aminotransferase, putative [Ricinus communis]

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 296/421 (70%), Positives = 352/421 (83%), Gaps = 2/421 (0%)

Query: 1   MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
           ME+G V  KWGF+   E +TA A +TVR  L  +  NL + D R +IPLGHGDPSAFP F
Sbjct: 1   MENG-VSTKWGFRA-NEGLTAAAAVTVRGVLDALNSNLNKEDERTVIPLGHGDPSAFPSF 58

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
            T   A DA+VDA++SA+++CYSP+VG+LPARRAIADYLN +LP +LSPDDV++T GC Q
Sbjct: 59  LTASAAEDAIVDALKSAKYNCYSPTVGLLPARRAIADYLNIDLPYELSPDDVFVTLGCTQ 118

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI+V LTVL RPGANILLP+PGFP Y   A  T LE+RHFDLLPEKGWEV+ + +EALAD
Sbjct: 119 AIEVSLTVLGRPGANILLPRPGFPYYTGIAAQTHLEVRHFDLLPEKGWEVNFEAVEALAD 178

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENT AMVI+NPGNPCGNV++Y+ L+KIAE ARKLGI+VI+DEVY HLTFGSTP+V MGVF
Sbjct: 179 ENTAAMVIINPGNPCGNVYSYEHLKKIAETARKLGILVIADEVYAHLTFGSTPFVPMGVF 238

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
           GS VPV+TLGS+SKRWIVPGWRLGWLV SDP GILQE  +VDSI   LNISS PATF+QG
Sbjct: 239 GSVVPVLTLGSISKRWIVPGWRLGWLVLSDPKGILQETGVVDSITSCLNISSDPATFIQG 298

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           A+PQI  NTK+DFF KI ++L++ A++CYDRI++IPCITC RKPEGSMF+M KLNLS L+
Sbjct: 299 AIPQILTNTKKDFFFKINNLLQEAAELCYDRIQDIPCITCLRKPEGSMFLMAKLNLSSLK 358

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           GI DDM+F L+LAKEESVIVLPG+ VG+KNWLRITFAIE S LE GLGRI+AF +RHAK+
Sbjct: 359 GIEDDMDFCLKLAKEESVIVLPGITVGLKNWLRITFAIELSTLEVGLGRIRAFYERHAKK 418

Query: 421 Q 421
           Q
Sbjct: 419 Q 419

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485208|ref|XP_003633232.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine aminotransferase-like [Vitis vinifera]

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 291/421 (69%), Positives = 354/421 (84%), Gaps = 2/421 (0%)

Query: 1   MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
           ME+G  +K+WGFQ  +E +   A++T+R  L  +  NL   D RP+IPLGHGDPSAF CF
Sbjct: 1   MENGG-RKRWGFQGNEE-LDKAASITIRGVLNKVMSNLNPQDHRPVIPLGHGDPSAFSCF 58

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           RTTPVA DA+VDA+RS +F+ Y+P+VGILPARRAIA++L+ +LP KLSPDD++LT GC Q
Sbjct: 59  RTTPVAEDAIVDALRSRKFNSYAPAVGILPARRAIAEHLSHDLPYKLSPDDIFLTIGCSQ 118

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI++I+ VLARPGANILLP+PG+P YE++A    LE RHFDLLPEKGWEVDL+G++ALAD
Sbjct: 119 AIELIIKVLARPGANILLPRPGYPFYESHAAANHLEFRHFDLLPEKGWEVDLEGVKALAD 178

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENTVAMVI+NPGNPCGN+FT++ L+K+AE AR LGI+VISDEVY HL FG  PYV MG F
Sbjct: 179 ENTVAMVIINPGNPCGNIFTHEHLKKVAETARMLGILVISDEVYAHLAFGGNPYVSMGAF 238

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
           GS  PVITLGS+SKRWIVPGWRLGWLVT+DP+GIL +  +V+SI   LNISS PATF+QG
Sbjct: 239 GSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILHKSGVVESIVSSLNISSDPATFIQG 298

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           AVPQI + T +DF+ KI+ ILR+TA  C+D I++IPC+TCP KPEGSMFVMVKLNLSLLE
Sbjct: 299 AVPQIIEKTTDDFYLKIISILRETAGTCFDGIEDIPCLTCPHKPEGSMFVMVKLNLSLLE 358

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
            I DD++F ++L+KEESVIV PG AVGMKNWLRITFAIEP +LE+GLGRIKAF QRHAK+
Sbjct: 359 DIEDDIDFCMKLSKEESVIVFPGFAVGMKNWLRITFAIEPPSLEDGLGRIKAFYQRHAKK 418

Query: 421 Q 421
           Q
Sbjct: 419 Q 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133450|ref|XP_002328045.1| aminotransferase family protein [Populus trichocarpa] gi|222837454|gb|EEE75833.1| aminotransferase family protein [Populus trichocarpa]

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 275/405 (67%), Positives = 348/405 (85%)

Query: 16  QEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVR 75
            E +  TA  ++R  L ++  +L ++D RP++PL HGDPSAF CFRT+P A DA+V AV+
Sbjct: 13  NELLDETAATSIRGYLIMLYDHLDKDDQRPVVPLSHGDPSAFACFRTSPEAVDAIVHAVQ 72

Query: 76  SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135
           SAEF+ Y+P++GILPARRA+A+YL+++LP  LS DD+YLT GC Q+I+VIL+ LARPGAN
Sbjct: 73  SAEFNSYAPTIGILPARRAVAEYLSADLPYNLSADDIYLTVGCTQSIEVILSALARPGAN 132

Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195
           ILLP+PG+PLYE+ A  ++LE+RHFDL+PEKGWEVDL+ +EALADENT A+VI++PGNPC
Sbjct: 133 ILLPRPGYPLYESRASFSKLEVRHFDLIPEKGWEVDLESVEALADENTAAIVIISPGNPC 192

Query: 196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKR 255
           GNVF+YQ L+K+AE ARKLGI VI+DEVY H+ FGS PYV MG FGS VPV++LGS+SKR
Sbjct: 193 GNVFSYQHLKKVAETARKLGIFVIADEVYGHIAFGSNPYVPMGEFGSIVPVLSLGSISKR 252

Query: 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFS 315
           WIVPGWRLGW+ T DP+GIL++  IVDSIK Y NISS PATFVQ A+PQIF+ TKEDFFS
Sbjct: 253 WIVPGWRLGWIATCDPNGILKKYGIVDSIKSYFNISSNPATFVQAAIPQIFEKTKEDFFS 312

Query: 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE 375
           K ++I+R+ ADICY++ KEIPC+TCP KP+GSMF MVKLNLSLLE ISDDM+F L+LA+E
Sbjct: 313 KTINIMREAADICYEKTKEIPCVTCPHKPDGSMFAMVKLNLSLLEDISDDMDFCLKLARE 372

Query: 376 ESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           ESVI+LPG+AVG+KNWLRITF+IEP +LE+GL R+KAFCQRH+++
Sbjct: 373 ESVIILPGVAVGLKNWLRITFSIEPQSLEQGLDRMKAFCQRHSRK 417

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325516250|gb|ADZ24703.1| tyrosine aminotransferase 2 [Solanum pennellii]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 282/423 (66%), Positives = 353/423 (83%), Gaps = 3/423 (0%)

Query: 1   MESGAV--KKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFP 58
           ME+G    +++W F+ + E + + + LTVRS L  +   +   D RP IPLGHGDPSAFP
Sbjct: 1   MENGTTTGRRRWNFK-ENEKLVSVSDLTVRSVLNKLMCCVDPADTRPTIPLGHGDPSAFP 59

Query: 59  CFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118
           CFRTTP+A DA+ DAVRSA F+ YS +VGILPARRA+A+YL+ +LP KLSPDD+YLT+GC
Sbjct: 60  CFRTTPIAEDAISDAVRSAMFNGYSSTVGILPARRAVAEYLSQDLPYKLSPDDIYLTSGC 119

Query: 119 KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178
            QAI+++L  LARP ANILLP PGFP YEA    T++E+RHF+LLPEK WEVDL+ +E+L
Sbjct: 120 GQAIEILLNALARPNANILLPTPGFPYYEAWGGFTQMEMRHFNLLPEKEWEVDLNAVESL 179

Query: 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238
           ADENTVAMVI+NPGNPCGNV++ + L+K+AE ARKLGI+VISDEVY HL FGS P+V MG
Sbjct: 180 ADENTVAMVIINPGNPCGNVYSEEHLKKVAETARKLGILVISDEVYAHLAFGSKPFVPMG 239

Query: 239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFV 298
           +FGS  PV+TLGS+SKRWIVPGWRLGWLVT+DP+GIL+E   +DSI GYLNIS+ PATF+
Sbjct: 240 IFGSIAPVVTLGSISKRWIVPGWRLGWLVTNDPNGILKEHGDIDSIMGYLNISTDPATFI 299

Query: 299 QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL 358
           QGA+PQI   TK+DFFSKIV++LR+ ADICY+RIK+IPCITCP KP+GSMF+MV+L+L+L
Sbjct: 300 QGAIPQILHETKDDFFSKIVNMLREDADICYERIKDIPCITCPSKPQGSMFLMVQLHLNL 359

Query: 359 LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
           LE I DD++F  +LAKEES+I+LPG+AVG+KNWLRITFA EPS LE+G  R+ AF +RHA
Sbjct: 360 LEDIEDDLDFCAKLAKEESLIILPGVAVGLKNWLRITFACEPSYLEDGFQRLNAFYKRHA 419

Query: 419 KQQ 421
           K+Q
Sbjct: 420 KKQ 422

Source: Solanum pennellii

Species: Solanum pennellii

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446435|ref|XP_002276464.1| PREDICTED: tyrosine aminotransferase isoform 1 [Vitis vinifera]

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 285/421 (67%), Positives = 343/421 (81%), Gaps = 2/421 (0%)

Query: 1   MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
           ME+GA ++ WGF+  Q  +   A++TVR  L  +  NL   D RP+I LG GDPSAF CF
Sbjct: 1   MENGAAER-WGFRGNQV-LDKAASITVRGVLRKVISNLNPQDRRPVITLGQGDPSAFSCF 58

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           RT P A +A+VDAVRS EFD Y P VG+LPARRAIA+YL+++LP KLSPDDVYLT GC Q
Sbjct: 59  RTAPEAEEAIVDAVRSREFDSYPPDVGVLPARRAIAEYLSTDLPYKLSPDDVYLTVGCGQ 118

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI++I+ VLARPGANILLP+PG+  YEA A    LE R FDLLPEK WEVDL+G++ALAD
Sbjct: 119 AIELIIKVLARPGANILLPRPGYAFYEALAAANHLEFRRFDLLPEKVWEVDLEGVKALAD 178

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENTVAMVI+NPGNPCGNVFT+Q L+K+AE AR LGI+VI+DEVY HL FGS P+V MGVF
Sbjct: 179 ENTVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPFVPMGVF 238

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
           GS  PVITLGS+SKRWIVPGWRLGWLVT+DP+GIL +  IV++I  YLNI + P +F+QG
Sbjct: 239 GSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGIVETIVSYLNICADPTSFIQG 298

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           AVPQI + T +DFFS+I+ +L  TADIC+D + +IPCITCP KPEG+M VMVKLN+SLLE
Sbjct: 299 AVPQIIEKTTDDFFSRIISLLGKTADICFDGLADIPCITCPHKPEGAMSVMVKLNVSLLE 358

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
            I DDM+F ++L+KEESVI+L G AVGMKNWLRITFA EP  LE+G+GRIKAFCQRHAK+
Sbjct: 359 DIDDDMDFCMKLSKEESVIILAGFAVGMKNWLRITFATEPPFLEDGIGRIKAFCQRHAKK 418

Query: 421 Q 421
           Q
Sbjct: 419 Q 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143330|emb|CBI21891.3| unnamed protein product [Vitis vinifera]

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 285/421 (67%), Positives = 343/421 (81%), Gaps = 2/421 (0%)

Query: 1   MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
           ME+GA ++ WGF+  Q  +   A++TVR  L  +  NL   D RP+I LG GDPSAF CF
Sbjct: 100 MENGAAER-WGFRGNQV-LDKAASITVRGVLRKVISNLNPQDRRPVITLGQGDPSAFSCF 157

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           RT P A +A+VDAVRS EFD Y P VG+LPARRAIA+YL+++LP KLSPDDVYLT GC Q
Sbjct: 158 RTAPEAEEAIVDAVRSREFDSYPPDVGVLPARRAIAEYLSTDLPYKLSPDDVYLTVGCGQ 217

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI++I+ VLARPGANILLP+PG+  YEA A    LE R FDLLPEK WEVDL+G++ALAD
Sbjct: 218 AIELIIKVLARPGANILLPRPGYAFYEALAAANHLEFRRFDLLPEKVWEVDLEGVKALAD 277

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENTVAMVI+NPGNPCGNVFT+Q L+K+AE AR LGI+VI+DEVY HL FGS P+V MGVF
Sbjct: 278 ENTVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPFVPMGVF 337

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
           GS  PVITLGS+SKRWIVPGWRLGWLVT+DP+GIL +  IV++I  YLNI + P +F+QG
Sbjct: 338 GSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGIVETIVSYLNICADPTSFIQG 397

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           AVPQI + T +DFFS+I+ +L  TADIC+D + +IPCITCP KPEG+M VMVKLN+SLLE
Sbjct: 398 AVPQIIEKTTDDFFSRIISLLGKTADICFDGLADIPCITCPHKPEGAMSVMVKLNVSLLE 457

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
            I DDM+F ++L+KEESVI+L G AVGMKNWLRITFA EP  LE+G+GRIKAFCQRHAK+
Sbjct: 458 DIDDDMDFCMKLSKEESVIILAGFAVGMKNWLRITFATEPPFLEDGIGRIKAFCQRHAKK 517

Query: 421 Q 421
           Q
Sbjct: 518 Q 518

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446431|ref|XP_002275047.1| PREDICTED: tyrosine aminotransferase [Vitis vinifera] gi|302143327|emb|CBI21888.3| unnamed protein product [Vitis vinifera]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 282/421 (66%), Positives = 345/421 (81%), Gaps = 2/421 (0%)

Query: 1   MESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
           ME+GA ++ WGF+  Q  +   +++TVR  L  +  NL   D RP+I LG GDPSAF  F
Sbjct: 1   MENGAAER-WGFRGNQV-LHKASSITVRGVLGKVISNLNPQDRRPVITLGQGDPSAFSSF 58

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           RT+P A +A+VDAVRS +F+ YSP VG+L ARRAIA+YL+++LP KLSPDDVYLT GC Q
Sbjct: 59  RTSPEAEEAIVDAVRSRKFNSYSPDVGVLTARRAIAEYLSADLPYKLSPDDVYLTIGCAQ 118

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI++I+ VLA PGANILLP+PG+ LYEA+A    LE R FDLLPEKGWEVDL+G++ALAD
Sbjct: 119 AIKLIIKVLALPGANILLPRPGYALYEAHAAANHLEFRRFDLLPEKGWEVDLEGVKALAD 178

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENTVAMVI+NPGNPCGNVFT+Q L+K+AE AR LGI+VI+DEVY HL FGS PYV MGVF
Sbjct: 179 ENTVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPYVPMGVF 238

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
           GS  PVITLGS+SKRWIVPGWRLGWLVT+DP+GIL +  +V++I   LNI + PATF+ G
Sbjct: 239 GSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGVVETIVSSLNICTDPATFIHG 298

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           AVPQI + T +DFFS+I+ +LR TADIC+D + +IPCITCP KPEG+M VMV LN+SLLE
Sbjct: 299 AVPQIIEKTTDDFFSRIIGLLRKTADICFDGLADIPCITCPHKPEGAMSVMVNLNVSLLE 358

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
            I DDM+F ++L+KEESVI+LPG  VGM+NWLRITFA EP +LE+GLGRIKAFCQRHAK+
Sbjct: 359 DIEDDMDFCVKLSKEESVIILPGFTVGMENWLRITFATEPPSLEDGLGRIKAFCQRHAKK 418

Query: 421 Q 421
           Q
Sbjct: 419 Q 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	421
TAIR|locus:2154714	414	TAT7 "tyrosine aminotransferas	0.954	0.971	0.590	1e-130
TAIR|locus:2158926	420	AT5G36160 [Arabidopsis thalian	0.990	0.992	0.561	2.8e-130
UNIPROTKB|Q9ST03	551	naat-B "Nicotianamine aminotra	0.978	0.747	0.563	9.3e-130
UNIPROTKB|Q9ST02	461	naat-A "Nicotianamine aminotra	0.992	0.906	0.551	1.7e-128
TAIR|locus:2046056	462	SUR1 "SUPERROOT 1" [Arabidopsi	0.973	0.887	0.508	5.1e-122
TAIR|locus:2121407	449	AT4G28420 [Arabidopsis thalian	0.973	0.913	0.493	1.7e-114
TAIR|locus:2121382	447	AT4G28410 [Arabidopsis thalian	0.976	0.919	0.480	5.9e-112
TAIR|locus:2047441	445	TAT3 "tyrosine aminotransferas	0.966	0.914	0.472	5.1e-106
TAIR|locus:2128434	424	AT4G23590 [Arabidopsis thalian	0.805	0.799	0.474	5.3e-88
TAIR|locus:2128459	422	CORI3 "CORONATINE INDUCED 1" [	0.812	0.810	0.461	5.3e-88

TAIR|locus:2154714 TAT7 "tyrosine aminotransferase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
 Identities = 239/405 (59%), Positives = 310/405 (76%)

Query:    20 TATATLTVRSALTIIKQNLK-ENDP--RPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRS 76
             T T+T+T++  L+++ +++  E D   + +I LG GDP+ + CFRTT            S
Sbjct:     6 TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQAVSDSLLS 65

Query:    77 AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANI 136
              +F  YSP+VG+  ARRAIA+YL+ +LP KLS DDV++T+GC QAI V L++LARP ANI
Sbjct:    66 NKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSMLARPRANI 125

Query:   137 LLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCG 196
             LLP+PGFP+YE  A+   LE+R+ DLLPE GWE+DLD +EALADENTVA+V++NPGNPCG
Sbjct:   126 LLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVINPGNPCG 185

Query:   197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256
             NV++YQ L KIAE A+KLG +VI+DEVY HL FGS P+V MGVFGS VPV+TLGS+SKRW
Sbjct:   186 NVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRW 245

Query:   257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSK 316
             IVPGWRLGW VT+DPSG  ++ +I++  K Y +I  GPATF+Q AVP I + T E FF K
Sbjct:   246 IVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAVPTILEQTDESFFKK 305

Query:   317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376
              ++ L++++DIC D IKEIPCI    +PEGSM +MVKLNLSLLE +SDD++F  +LA+EE
Sbjct:   306 TLNSLKNSSDICCDWIKEIPCIDSSHRPEGSMAMMVKLNLSLLEDVSDDIDFCFKLAREE 365

Query:   377 SVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
             SVI+LPG AVG+KNWLRITFA + +++EE   RIK F  RHAK Q
Sbjct:   366 SVILLPGTAVGLKNWLRITFAADATSIEEAFKRIKCFYLRHAKTQ 410

GO:0005737 "cytoplasm" evidence=ISM

GO:0008483 "transaminase activity" evidence=ISS

GO:0009058 "biosynthetic process" evidence=ISS

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IGI;IMP;IDA;TAS

GO:0010189 "vitamin E biosynthetic process" evidence=IEP;IMP

TAIR|locus:2158926 AT5G36160 [Arabidopsis thaliana (taxid:3702)]

 Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
 Identities = 236/420 (56%), Positives = 314/420 (74%)

Query:     2 ESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFR 61
             E+GA  K+W F    E +  + +LT+R  L  +   L   D RP+IPLGHGDPS FP FR
Sbjct:     3 ENGA--KRWNFGAN-EVVERSNSLTIRDYLNTLINCLDGGDVRPVIPLGHGDPSPFPSFR 59

Query:    62 TTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121
             T            RS +F+ YS S G+  AR+A+A+YL+S+L  ++SP+DV++TAGC QA
Sbjct:    60 TDQAAVEAICDAVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQA 119

Query:   122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE 181
             I+++++ LA PGANILLP+P +P+Y++ A   +LE+R+FDLLPE GW+VDLDG+EALAD+
Sbjct:   120 IEILISALAIPGANILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADD 179

Query:   182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241
              TVA++++NP NPCGNVF+ Q LQKIAE A KLGI+VI+DEVYDH  FG  P+V M  F 
Sbjct:   180 KTVAILVINPCNPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFA 239

Query:   242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGA 301
               VPVI LG++SKRW VPGWRLGW+VT DP GI+++   V ++   +N+S+ PATF+QGA
Sbjct:   240 ELVPVIVLGAISKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQGA 299

Query:   302 VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361
             +P I  NTKE+FFS  +++++  A+ICY+ + +IPCITCP KPEGSMF MVKLN SLLE 
Sbjct:   300 MPDIIGNTKEEFFSSKLEMVKKCAEICYEELMKIPCITCPCKPEGSMFTMVKLNFSLLED 359

Query:   362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
             ISDD++F  +LAKEES+I+LPG AVG+KNWLRITFA+E   L EG  R+K F +RH+K Q
Sbjct:   360 ISDDLDFCSKLAKEESMIILPGQAVGLKNWLRITFAVELELLIEGFSRLKNFTERHSKNQ 419

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IDA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IGI

GO:0006572 "tyrosine catabolic process" evidence=IGI

UNIPROTKB|Q9ST03 naat-B "Nicotianamine aminotransferase B" [Hordeum vulgare (taxid:4513)]

 Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
 Identities = 234/415 (56%), Positives = 310/415 (74%)

Query:     9 KWGFQ-VKQEHITAT-ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPXX 66
             +W F   K   + AT A +++R+    I  +++E  PRP++PL HGDPS FP FRT    
Sbjct:   131 EWNFAGAKDGVLAATGANMSIRAIRYKISASVQEKGPRPVLPLAHGDPSVFPAFRTAVEA 190

Query:    67 XXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVIL 126
                     R+ +F+CY   VG+  AR A+A++L+  +P  LS DDV+LTAG  QAI+VI+
Sbjct:   191 EDAVAAAVRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVII 250

Query:   127 TVLARP-GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185
              VLA+  GANILLP+PG+P YEA A   RLE+RHFDL+P+KGWE+D+D LE++AD+NT A
Sbjct:   251 PVLAQTAGANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTA 310

Query:   186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245
             MVI+NP NPCG+V++Y  L K+AE A++LGI+VI+DEVY  L  GS P++ MGVFG   P
Sbjct:   311 MVIINPNNPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITP 370

Query:   246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI 305
             V+++GS+SK WIVPGWRLGW+   DP  ILQE +I  SI  YLN+S+ PATF+Q A+PQI
Sbjct:   371 VLSIGSLSKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAALPQI 430

Query:   306 FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDD 365
              +NTKEDFF  I+ +L+++++ICY +IKE   ITCP KPEGSMFVMVKLNL LLE I DD
Sbjct:   431 LENTKEDFFKAIIGLLKESSEICYKQIKENKYITCPHKPEGSMFVMVKLNLHLLEEIDDD 490

Query:   366 MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
             ++F  +LAKEESVI+ PG  +GM NW+RITFA  PS+L++GLGRIK+FCQR+ K+
Sbjct:   491 IDFCCKLAKEESVILCPGSVLGMANWVRITFACVPSSLQDGLGRIKSFCQRNKKR 545

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

UNIPROTKB|Q9ST02 naat-A "Nicotianamine aminotransferase A" [Hordeum vulgare (taxid:4513)]

 Score = 1261 (449.0 bits), Expect = 1.7e-128, P = 1.7e-128
 Identities = 232/421 (55%), Positives = 315/421 (74%)

Query:     3 SGAVKKKWGFQVKQEHITAT--ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCF 60
             + A   +W F   ++ I AT  A  ++R+    I  +++E+ PRP++PL HGDPS FP F
Sbjct:    35 AAAAAVEWNFARGKDGILATTGAKNSIRAIRYKISASVEESGPRPVLPLAHGDPSVFPAF 94

Query:    61 RTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
             RT            R+ +F+CY+  VG+  AR A+A++L+  +P KLS DDV+LTAG  Q
Sbjct:    95 RTAVEAEDAVAAALRTGQFNCYAAGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAGGTQ 154

Query:   121 AIQVILTVLARP-GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179
             AI+VI+ VLA+  GANILLP+PG+P YEA A   +LE+RHFDL+P+KGWE+D+D LE++A
Sbjct:   155 AIEVIIPVLAQTAGANILLPRPGYPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLESIA 214

Query:   180 DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV 239
             D+NT AMVI+NP NPCG+V++Y  L K+AE ARKLGI+VI+DEVY  L  GS P++ MGV
Sbjct:   215 DKNTTAMVIINPNNPCGSVYSYDHLAKVAEVARKLGILVIADEVYGKLVLGSAPFIPMGV 274

Query:   240 FGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQ 299
             FG   PV+++GS+SK WIVPGWRLGW+   DP+ IL++ +I  SI  YLN+S+ PATFVQ
Sbjct:   275 FGHIAPVLSIGSLSKSWIVPGWRLGWVAVYDPTKILEKTKISTSITNYLNVSTDPATFVQ 334

Query:   300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359
              A+P+I +NTK DFF +I+ +L+++++ICY  IKE   ITCP KPEGSMFVMVKLNL LL
Sbjct:   335 EALPKILENTKADFFKRIIGLLKESSEICYREIKENKYITCPHKPEGSMFVMVKLNLHLL 394

Query:   360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
             E I DD++F  +LAKEESVI+ PG  +GM+NW+RITFA  PS+L++GL R+K+FCQR+ K
Sbjct:   395 EEIHDDIDFCCKLAKEESVILCPGSVLGMENWVRITFACVPSSLQDGLERVKSFCQRNKK 454

Query:   420 Q 420
             +
Sbjct:   455 K 455

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

TAIR|locus:2046056 SUR1 "SUPERROOT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
 Identities = 209/411 (50%), Positives = 297/411 (72%)

Query:    10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPXXXXX 69
             W F    +   A+ T+T+R  + ++  N  ++  + I+PLGHGDPS +PCFRT       
Sbjct:    33 WRFGGSDKAAKAS-TVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDA 91

Query:    70 XXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL 129
                  RS + + Y P  GILPARRA+ADY+N +LP KL+P+D++LTAGC Q I+++   L
Sbjct:    92 VVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESL 151

Query:   130 ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189
             ARP ANILLP+PGFP Y+A A ++ LE+R FDLLPEK WE+DL+G+EA+ADENTVAMV++
Sbjct:   152 ARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVI 211

Query:   190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249
             NP NPCGNV+++  L+K+AE ARKLGIMVISDEVYD   FG  P+V MG F S VPV+TL
Sbjct:   212 NPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTL 271

Query:   250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT 309
               +SK W+VPGW++GW+  +DP G+ +  +++ SIK  L+++  PAT +Q A+P I +  
Sbjct:   272 AGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA 331

Query:   310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
              ++FF+K   IL+   D+  DR+K+IPC+ CP+KPE   +++ KL LSL++ I DD++F 
Sbjct:   332 DKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFC 391

Query:   370 LQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
             ++LA+EE+++ LPG A+G+KNW+RIT  +E   LE+ L R+K FC RHAK+
Sbjct:   392 VKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;RCA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0016846 "carbon-sulfur lyase activity" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA;IMP

GO:0080108 "S-alkylthiohydroximate lyase activity" evidence=IMP

GO:0001560 "regulation of cell growth by extracellular stimulus" evidence=IMP

GO:0048830 "adventitious root development" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=IMP;RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019760 "glucosinolate metabolic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TAIR|locus:2121407 AT4G28420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
 Identities = 203/411 (49%), Positives = 288/411 (70%)

Query:    10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPXXXXX 69
             W F+   ++    +++T+R  +  +      +  +P++PL HGDPS +PC+RT+      
Sbjct:    27 WRFR-GSDNAAKASSVTMRVIVYKLFDECSLDVKKPLLPLAHGDPSVYPCYRTSILVENA 85

Query:    70 XXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL 129
                  RS + + Y P+ GILPAR+A+ADY+N +L  K+ P+DV++T GC Q I+V+L  L
Sbjct:    86 VVDVLRSGKGNSYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSL 145

Query:   130 ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189
             ARP ANILLP+P +P YEA A ++ LE+R FDLLPEK WE+DL G+EA+ADENTVAMVI+
Sbjct:   146 ARPNANILLPRPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVII 205

Query:   190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249
             NP NPCGNV++Y  L+K+AE A+KLGIMVI+DEVY    FG  P+V MG F S  PVITL
Sbjct:   206 NPNNPCGNVYSYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITL 265

Query:   250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT 309
             G +SK WIVPGWR+GW+  +DP GIL+   +V SI+  L+I+    T VQ A+P+I    
Sbjct:   266 GGISKGWIVPGWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQAALPEILGKA 325

Query:   310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
              ++ F+K   +L+   ++  DR+KEIPC+ C +KPE   +++ KL L LLE I DDM+F 
Sbjct:   326 NKELFAKKNSMLKQNVELVCDRLKEIPCLVCNKKPESCTYLLTKLKLPLLEDIEDDMDFC 385

Query:   370 LQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
             ++LAKEE++++LPG+A+G+KNW+RIT  +E   LE+ L R+  FC+RH K+
Sbjct:   386 MKLAKEENLVLLPGVALGLKNWIRITIGVEAQMLEDALERLNGFCKRHLKK 436

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2121382 AT4G28410 [Arabidopsis thaliana (taxid:3702)]

 Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
 Identities = 198/412 (48%), Positives = 290/412 (70%)

Query:    10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPXXXXX 69
             W F+  +    A A+++++  L  +     ++  + I+PLGHGDPS +PCF+T+      
Sbjct:    35 WRFKGNKAAKEA-ASVSMKGTLARLFDCCSKDVKKTILPLGHGDPSVYPCFQTSVDAEEA 93

Query:    70 XXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL 129
                  RS   + Y+P VGILPARRA+A+YLN +LP K+  DD+++T GC Q I+ ++  L
Sbjct:    94 VVESLRSGAANSYAPGVGILPARRAVANYLNRDLPHKIHSDDIFMTVGCCQGIETMIHAL 153

Query:   130 ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189
             A P ANILLP   +PLY ++A H+ +EIR ++LLP+  WE+DL G+EA+ADENT+A+VI+
Sbjct:   154 AGPKANILLPTLIYPLYNSHAIHSLVEIRKYNLLPDLDWEIDLQGVEAMADENTIAVVIM 213

Query:   190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249
             NP NPCGNV+TY+ L+K+AE ARKLGIMVISDEVY+   +G   +V MG+F S  PV+TL
Sbjct:   214 NPHNPCGNVYTYEHLKKVAEVARKLGIMVISDEVYNQTIYGENKFVPMGIFSSITPVVTL 273

Query:   250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT 309
             GS+SK W+VPGWR+GW+  +DP  + +  R+V+SIK +L+IS  P+T +Q A+P I + T
Sbjct:   274 GSISKGWLVPGWRIGWIAMNDPKNVFKTTRVVESIKEHLDISPDPSTILQFALPNILEKT 333

Query:   310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
             K++FF K   IL    D  +D +K+IPC+TCP+KPE   +++ KL+LSLLE I++D +F 
Sbjct:   334 KKEFFEKNNSILSQNVDFAFDALKDIPCLTCPKKPESCTYLVTKLDLSLLEDITNDFDFC 393

Query:   370 LQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
             ++LA+EE+++ LPG  +G+KNW+R +  +E S LE+   R+K F  RH K Q
Sbjct:   394 MKLAQEENLVFLPGEVLGLKNWVRFSIGVERSMLEDAFMRLKGFFARHTKTQ 445

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2047441 TAT3 "tyrosine aminotransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
 Identities = 194/411 (47%), Positives = 277/411 (67%)

Query:    10 WGFQVKQEHITA-TATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPXXXX 68
             W F  K    T+  A +T+R     + +N   N  + I+    G+PSA   FRT P    
Sbjct:    16 WRF--KGNGATSDAAAVTLRKLAFGMFKNCTMNSGKTILFPTPGEPSAHSNFRTCPEAEE 73

Query:    69 XXXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTV 128
                   RS   + Y+PS G+  ARRA+A+YLN ELP KL  +DVY+T GC QAI++++  
Sbjct:    74 AVAAAARSGMANSYAPSPGVFKARRAVAEYLNGELPTKLKAEDVYITGGCNQAIEIVIDS 133

Query:   129 LA-RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV 187
             LA  P ANILLP+PG+P Y+A A ++ LEIR +DLLPE  WE++LDGLEA ADENTVAMV
Sbjct:   134 LAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDLLPESDWEINLDGLEAAADENTVAMV 193

Query:   188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI 247
             I+NP NPCGNV+TY  L K+AE ARKLGIM+ISDEVYDH+ +G  P++ MG F S  PVI
Sbjct:   194 IINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASIAPVI 253

Query:   248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFK 307
             TLGS+SK W+ PGWR+GW+  +DP+GI     +V +I+ +L+++  P+  +Q A+P I +
Sbjct:   254 TLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQAIEDFLDLTPQPSFILQEALPDILE 313

Query:   308 NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDME 367
              T ++FF K +  +R   ++  +R+K+IPC+ CP+KPE   ++ +KL+ S+L  I +D +
Sbjct:   314 KTPKEFFEKKIKAMRRNVELSCERLKDIPCLFCPKKPESCSYLWLKLDTSMLNNIKNDFD 373

Query:   368 FALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
             F  +L  EES+I++PG+A+G +NW+RI+   + S ++E   R+K F  RHA
Sbjct:   374 FCTKLVSEESLILIPGVALGAENWVRISIGTDESVVQEIFDRLKGFYDRHA 424

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=ISS

TAIR|locus:2128434 AT4G23590 [Arabidopsis thaliana (taxid:3702)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 161/339 (47%), Positives = 233/339 (68%)

Query:    80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139
             + Y+PS+G+  A+RA+A+YLN +L  KL+ DDVY+T GCKQAI++ +++LA+P ANILLP
Sbjct:    71 NAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQAIELAVSILAKPKANILLP 130

Query:   140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
             +PGFP    ++ +  LE+R ++ +PE+ +E+D + +  + DENT A+ I+NP NP GN +
Sbjct:   131 RPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVDENTFAIFIINPHNPNGNYY 190

Query:   200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259
             T   L+++A  AR+LGIMV+SDEVY    FGS P+V MG F S VPVITLGS+SK WIVP
Sbjct:   191 TEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKFSSIVPVITLGSISKGWIVP 250

Query:   260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319
             GWR GWL   D +G+ +  +++ + K +L I+S P T +Q A+P I + T +DFF K   
Sbjct:   251 GWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQAAIPTILEKTPQDFFEKRGI 310

Query:   320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379
              L+D  D  Y ++K IP +TC  KPE   F+  KL+      I DD +F  +LAKEE+++
Sbjct:   311 FLKDKVDFGYSKLKNIPTLTCYMKPESCTFLWTKLDPLHFVDIEDDHDFCRKLAKEENLV 370

Query:   380 VLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
             VLPG+A G  NWLR +  +E   LE+   R+K+FC+RH+
Sbjct:   371 VLPGIAFGQNNWLRHSIDMETPRLEDAFERLKSFCERHS 409

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2128459 CORI3 "CORONATINE INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 158/342 (46%), Positives = 233/342 (68%)

Query:    80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139
             + Y+PS+G+  A+ A+A+YLN  LP KL+ DDV++T GCKQAI++ + +LA+P AN+LLP
Sbjct:    71 NAYAPSLGLAAAKSAVAEYLNQGLPKKLTADDVFMTLGCKQAIELAVDILAKPKANVLLP 130

Query:   140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
              PGFP     + +  LE+RH++ LPEK +E+D D + AL DENT A+ I+NP NP GN +
Sbjct:   131 SPGFPWDLVRSIYKNLEVRHYNFLPEKNFEIDFDSVRALVDENTFAIFIINPHNPNGNTY 190

Query:   200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259
             +   L+++AE A++L IMV+SDEV+    FGS P+V MG F S VPV+TLGS+SK W VP
Sbjct:   191 SEAHLKQLAELAKELKIMVVSDEVFRWTLFGSNPFVPMGKFSSIVPVVTLGSISKGWKVP 250

Query:   260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319
             GWR GWL   D  G+ +  +++ + + +L I++ P T +Q A+P I + T ++FF K   
Sbjct:   251 GWRTGWLTLHDLDGVFRNTKVLQAAQDFLQINNNPPTVIQAAIPDILEKTPQEFFDKRQS 310

Query:   320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379
              L+D  +  Y ++K IP +TC  KPE   F+  +L+LS    I DD +F  +LAKEE+++
Sbjct:   311 FLKDKVEFGYSKLKYIPSLTCYMKPEACTFLWTELDLSSFVDIEDDQDFCNKLAKEENLV 370

Query:   380 VLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
             VLPG+A   KNWLR +  +E   LE+ L R+K+FC RH+ ++
Sbjct:   371 VLPGIAFSQKNWLRHSIDMETPVLEDALERLKSFCDRHSNKK 412

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IEP

GO:0008483 "transaminase activity" evidence=IEA;ISS;NAS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0010188 "response to microbial phytotoxin" evidence=IEP

GO:0004021 "L-alanine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004121 "cystathionine beta-lyase activity" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=TAS

GO:0050362 "L-tryptophan:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ST02	NAATA_HORVU	2, ., 6, ., 1, ., 8, 0	0.5602	0.9976	0.9110	N/A	no
Q8QZR1	ATTY_MOUSE	2, ., 6, ., 1, ., 5	0.3629	0.9477	0.8788	yes	no
Q54K95	ATTY_DICDI	2, ., 6, ., 1, ., 5	0.3325	0.9809	0.9904	yes	no
Q9FN30	TAT2_ARATH	2, ., 6, ., 1, ., -	0.5950	0.9548	0.9710	yes	no
P17735	ATTY_HUMAN	2, ., 6, ., 1, ., 5	0.3766	0.8836	0.8193	yes	no
P04694	ATTY_RAT	2, ., 6, ., 1, ., 5	0.3557	0.9477	0.8788	yes	no
Q58CZ9	ATTY_BOVIN	2, ., 6, ., 1, ., 5	0.3629	0.9691	0.9127	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	421
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	0.0
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	0.0
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	0.0
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	0.0
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	1e-170
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	1e-118
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	5e-95
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	7e-87
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	5e-78
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	6e-65
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	4e-56
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	3e-55
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	2e-47
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	4e-47
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	2e-40
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	1e-38
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	1e-37
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	6e-37
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	3e-34
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	2e-33
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	4e-33
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	3e-31
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	8e-31
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	2e-30
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	3e-30
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	1e-29
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	2e-29
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	2e-29
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	5e-29
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	2e-28
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	2e-27
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	5e-26
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	3e-25
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	1e-24
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	4e-24
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	9e-24
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	5e-23
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	5e-22
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	7e-22
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	1e-20
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	5e-20
PLN02231	534	PLN02231, PLN02231, alanine transaminase	1e-19
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	3e-19
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	7e-19
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	1e-18
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	4e-18
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	5e-18
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	6e-18
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	2e-16
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	3e-16
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	3e-16
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	6e-16
PLN02368	407	PLN02368, PLN02368, alanine transaminase	7e-16
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	1e-15
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	1e-15
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	2e-15
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	2e-15
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	3e-15
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	1e-14
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	1e-14
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	8e-14
PRK08636	403	PRK08636, PRK08636, aspartate aminotransferase; Pr	1e-12
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	4e-12
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	1e-11
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	1e-11
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	3e-11
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	5e-11
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	7e-11
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	2e-10
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	2e-10
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	6e-10
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	1e-09
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	2e-09
PLN02450	468	PLN02450, PLN02450, 1-aminocyclopropane-1-carboxyl	1e-08
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	1e-08
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	1e-08
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	2e-08
PRK07366	388	PRK07366, PRK07366, succinyldiaminopimelate transa	1e-07
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	2e-07
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	7e-07
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	2e-06
cd00614	369	cd00614, CGS_like, CGS_like: Cystathionine gamma-s	3e-06
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	5e-06
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	7e-06
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	7e-06
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	1e-05
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	3e-05
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	4e-05
PRK00451	447	PRK00451, PRK00451, glycine dehydrogenase subunit	4e-05
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	5e-05
pfam00266	370	pfam00266, Aminotran_5, Aminotransferase class-V	1e-04
PRK02610	374	PRK02610, PRK02610, histidinol-phosphate aminotran	2e-04
pfam01053	382	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP	2e-04
PRK03321	352	PRK03321, PRK03321, putative aminotransferase; Pro	3e-04
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	6e-04
cd00613	398	cd00613, GDC-P, Glycine cleavage system P-protein,	6e-04
COG2873	426	COG2873, MET17, O-acetylhomoserine sulfhydrylase [	6e-04
PRK06084	425	PRK06084, PRK06084, O-acetylhomoserine aminocarbox	0.001
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	0.001
cd06453	373	cd06453, SufS_like, Cysteine desulfurase (SufS)-li	0.002
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	0.002
PRK03317	368	PRK03317, PRK03317, histidinol-phosphate aminotran	0.002
PRK13360	442	PRK13360, PRK13360, omega amino acid--pyruvate tra	0.003
TIGR01326	418	TIGR01326, OAH_OAS_sulfhy, OAH/OAS sulfhydrylase	0.003
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	0.004

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  712 bits (1839), Expect = 0.0
 Identities = 278/419 (66%), Positives = 347/419 (82%), Gaps = 1/419 (0%)

Query: 2   ESGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKEND-PRPIIPLGHGDPSAFPCF 60
             G    +W F+     + A   L++R+ L  +K  +     PRP++PLGHGDPSAFPCF
Sbjct: 9   GGGHATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCF 68

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           RT P A DAV  A+RS +++ YS  VG+LPARRAIA+YL+ +LP +LS DD+YLTAGC Q
Sbjct: 69  RTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQ 128

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180
           AI++I++VLA+PGANILLP+PG+PLYEA A  + LE+RHFDLLPE+GWEVDL+G+EALAD
Sbjct: 129 AIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD 188

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           ENTVAMVI+NP NPCG+V++Y+ L KIAE ARKLGI+VI+DEVYDHLTFGS P+V MGVF
Sbjct: 189 ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVF 248

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
           G   PV+TLGS+SKRW+VPGWRLGW+ T DP+GIL+E ++VDSI+ YLNIS+ PATFVQG
Sbjct: 249 GEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQG 308

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360
           A+PQI  NTKE+FF+K + +L++TADICY++IKEI CITCP KPEGSMFVMVKL+LS L 
Sbjct: 309 AIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLS 368

Query: 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
           GI DDM+F  +LAKEESV+VLPG A+GMKNWLRITFAI+P +LE+GL R+K+FC RHAK
Sbjct: 369 GIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAK 427

Length = 430

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  619 bits (1598), Expect = 0.0
 Identities = 260/401 (64%), Positives = 322/401 (80%)

Query: 20  TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF 79
           T   + ++  A+  +K+N  E+D R  I  G GDPS F CFRTT +A DA+V+AVRSA+F
Sbjct: 8   TEPPSYSIDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKF 67

Query: 80  DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139
           + Y+P+ GILPARRAIADYL+++LP +LSPDDVYLT GCK A ++I+ VLARP ANILLP
Sbjct: 68  NSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLP 127

Query: 140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
           +PGFP  E  A    LEIRHFDLLPEKGWEVDLD +EA+ADENT+AMVI+NPGNPCG+V+
Sbjct: 128 RPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVY 187

Query: 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259
           +Y+ L KIAE ARKLGI+VI+DEVY H+ FGS P+V MG+F S VPVITLGS+SKRW++P
Sbjct: 188 SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIP 247

Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319
           GW LGWLVT DPSG+LQ   I DSIK  LN +  P TF+Q A+P+I + T EDFFSK ++
Sbjct: 248 GWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTIN 307

Query: 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379
           ILR     CYD++KEIPCI CP+K EG+ F +VKLNL LLE I DDMEF L+LAKEES+I
Sbjct: 308 ILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLI 367

Query: 380 VLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           +LPG+ VG+KNWLRITFA+E S+LE+GLGR+K+FC RHAK+
Sbjct: 368 ILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408

Length = 409

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score =  604 bits (1560), Expect = 0.0
 Identities = 260/403 (64%), Positives = 329/403 (81%), Gaps = 1/403 (0%)

Query: 20  TATATLTVRSALTIIKQNLK-ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE 78
             T T+T++  L+++ +++  E + + +I LG GDP+A+ CF TT VA +AVVDA++S +
Sbjct: 6   DTTKTITIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNK 65

Query: 79  FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
           F+ Y+P+VG+  ARRAIA+YL+ +LP KLS DDV++T+GC QAI V L++LARPGANILL
Sbjct: 66  FNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILL 125

Query: 139 PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNV 198
           P+PGFP+YE  A    LE+R+ DLLPEKGWEVDLD +EALAD+NTVA+VI+NPGNPCGNV
Sbjct: 126 PRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNV 185

Query: 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258
           ++YQ L+KIAE A KL I+VI+DEVY HL FGS P+V MGVFGS VPV+TLGS+SKRWIV
Sbjct: 186 YSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIV 245

Query: 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIV 318
           PGWRLGW VT+DPSG  ++ +IV+ IK Y +I  GPATF+Q AVP I + T E FF K +
Sbjct: 246 PGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTI 305

Query: 319 DILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESV 378
           +IL+ ++DIC DRIKEIPCITCP KPEGSM VMVKLNLSLLE ISDD++F  +LA+EESV
Sbjct: 306 NILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESV 365

Query: 379 IVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
           I+LPG AVG+KNWLRITFA +PS+LEE LGRIK+F  RH+K Q
Sbjct: 366 IILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKTQ 408

Length = 409

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score =  584 bits (1508), Expect = 0.0
 Identities = 212/405 (52%), Positives = 287/405 (70%), Gaps = 4/405 (0%)

Query: 14  VKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDA 73
            K    +      +R+ +  +K        +P+IPL HGDPS F   RT P A +AV DA
Sbjct: 3   FKGSDHSNKTVNPIRAIVDNLKVKPNPE--KPVIPLSHGDPSVFGNLRTDPEAEEAVKDA 60

Query: 74  VRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG 133
           +RS +F+ Y+PSVG L AR A+A+YL+S+LP KL+ DDV LT+GC QAI++ +  LA PG
Sbjct: 61  LRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPG 120

Query: 134 ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193
           ANIL+P+PGFPLY+  A  + LE+R +DLLPEK WE+DLDGLE+LADE TVA+V++NP N
Sbjct: 121 ANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLESLADEKTVAIVVINPSN 180

Query: 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS 253
           PCG+VF+   LQKIAE A KLGI +I+DE+Y H+ FG  P++ M  F S VPV++LG +S
Sbjct: 181 PCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGIS 240

Query: 254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDF 313
           KRW+VPGWRLGW++  DP GI ++  ++  +K  L    GPAT VQGA+P I +NT ++F
Sbjct: 241 KRWVVPGWRLGWIIIHDPHGIFRD-TVLQGLKNLLQRILGPATIVQGALPDILENTPQEF 299

Query: 314 FSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLA 373
           F   + +L+  A++CY+ +K+IP + CP KPEG+M++MVKL L L   I DD++F  +LA
Sbjct: 300 FDGKISVLKSNAELCYEELKDIPGLVCP-KPEGAMYLMVKLELELFPEIKDDVDFCEKLA 358

Query: 374 KEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
           +EESVI LPG A G+ NW+RIT  +  S LEE   RIK FC+RHA
Sbjct: 359 REESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCERHA 403

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score =  483 bits (1245), Expect = e-170
 Identities = 212/398 (53%), Positives = 300/398 (75%)

Query: 23  ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCY 82
           +T+T+R  + ++  N  ++  + I+PLGHGDPS +PCFRT   A DAVVD +RS + + Y
Sbjct: 45  STVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSY 104

Query: 83  SPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPG 142
            P  GILPARRA+ADY+N +LP KL+P+D++LTAGC Q I+++   LARP ANILLP+PG
Sbjct: 105 GPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPG 164

Query: 143 FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202
           FP Y+A A ++ LE+R FDLLPEK WE+DL+G+EA+ADENTVAMV++NP NPCGNV+++ 
Sbjct: 165 FPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHD 224

Query: 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262
            L+K+AE ARKLGIMVISDEVYD   FG  P+V MG F S VPV+TL  +SK W+VPGW+
Sbjct: 225 HLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWK 284

Query: 263 LGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR 322
           +GW+  +DP G+ +  +++ SIK  L+++  PAT +Q A+P I +   ++FF+K   IL+
Sbjct: 285 IGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILK 344

Query: 323 DTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382
              D+  DR+K+IPC+ CP+KPE   +++ KL LSL++ I DD++F ++LA+EE+++ LP
Sbjct: 345 HNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLP 404

Query: 383 GMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           G A+G+KNW+RIT  +E   LE+ L R+K FC RHAK+
Sbjct: 405 GDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442

Length = 462

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score =  349 bits (896), Expect = e-118
 Identities = 143/380 (37%), Positives = 222/380 (58%), Gaps = 4/380 (1%)

Query: 39  KENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98
           K N  +P+I L  GDP+ F    T P    A+ D++ S +++ Y+P+VG L AR AIA Y
Sbjct: 26  KPNPEKPVIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASY 85

Query: 99  LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIR 158
            ++     +  DDV L +GC  AI++ +  LA  G NIL+P+PGFPLY   A    +E++
Sbjct: 86  YHN-PDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYRTLAESMGIEVK 144

Query: 159 HFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV 218
            ++LLP+K WE+DL  LE+L DE T A+V+ NP NPCG+VF+ Q L++I   A +  + +
Sbjct: 145 LYNLLPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAVAERQCLPI 204

Query: 219 ISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278
           I+DE+Y  + F    +  +    S VP+++ G ++KRW+VPGWRLGW++  D  GIL+++
Sbjct: 205 IADEIYGDMVFSGATFEPVASLSSNVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDI 264

Query: 279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI 338
           R  D +        GP T VQGA+P I   T +++F   + +L   A +CY  +  +P +
Sbjct: 265 R--DGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGL 322

Query: 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAI 398
             P  P G+M++MV + +       +D+EF  +L  E+SV  LPG       + R+   +
Sbjct: 323 Q-PVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLIAEQSVFCLPGSCFEYPGFFRVVLTV 381

Query: 399 EPSALEEGLGRIKAFCQRHA 418
               +EE   RI+ FC+RH 
Sbjct: 382 PVVMMEEACSRIQEFCERHY 401

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score =  290 bits (745), Expect = 5e-95
 Identities = 142/383 (37%), Positives = 209/383 (54%), Gaps = 9/383 (2%)

Query: 43  PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY---- 98
           P+ II L  GDP+      T  +   A+V+AV S E + Y P+VG   AR A+A Y    
Sbjct: 32  PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNS 91

Query: 99  --LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
                 L   +  D+V L +G   AI + LT L   G NIL+P PGFP YE   +   +E
Sbjct: 92  FVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIE 151

Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           +R ++  PEK WE DLD +  L D+ T A+++ NP NPCG+ F+ + ++ I     +L +
Sbjct: 152 MRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRL 211

Query: 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276
            +ISDE+Y  + F    +  +  F +TVP + LG  +K  +VPGWRLGWL+  DP G   
Sbjct: 212 PLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGG 271

Query: 277 ELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336
           +   +D +K    +  GP + VQ A+ +   NT ++   +IV  L + A + Y+ I E  
Sbjct: 272 DF--LDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECI 329

Query: 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF 396
            ++    P GSMF+M +L+L     I  D+EF  +L +EE+V VLPG    M  + R+T 
Sbjct: 330 GLSPTM-PRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTI 388

Query: 397 AIEPSALEEGLGRIKAFCQRHAK 419
           +     L E + RIKAFC+RH K
Sbjct: 389 SRPVEVLREAVERIKAFCERHKK 411

Length = 412

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  268 bits (686), Expect = 7e-87
 Identities = 113/369 (30%), Positives = 181/369 (49%), Gaps = 22/369 (5%)

Query: 47  IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK 106
           I L  G+P     F   P   +A+  A   A    Y P  G+   R AIA++L       
Sbjct: 1   IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVD 56

Query: 107 LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK 166
           + P+++ +T G ++A+ ++L  L  PG  +L+P P +P YEA AR    E+    L  E 
Sbjct: 57  VPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEG 116

Query: 167 GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226
           G+ +DL+ LEA     T  + + NP NP G V + ++L+++AE A+K GI++ISDE Y  
Sbjct: 117 GFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAE 176

Query: 227 LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG 286
           L +   P   + +  +   VI L S SK + +PG R+G+L+            +++ +K 
Sbjct: 177 LVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------ELLERLKK 229

Query: 287 YL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345
            L   +SGP+T  Q A      +  E+   ++ +  R   D   + +KE+  +    KP 
Sbjct: 230 LLPYTTSGPSTLSQAAAAAALDDG-EEHLEELRERYRRRRDALLEALKELGPLVV-VKPS 287

Query: 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSAL 403
           G  F+ + L         DD EF  +L  E  V+V PG A G   + ++R++FA     L
Sbjct: 288 GGFFLWLDLP------EGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEEL 341

Query: 404 EEGLGRIKA 412
           EE L R+  
Sbjct: 342 EEALERLAE 350

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  246 bits (631), Expect = 5e-78
 Identities = 110/383 (28%), Positives = 189/383 (49%), Gaps = 23/383 (6%)

Query: 43  PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSE 102
              +I L  G+P     F T     +A ++A+       Y+PS GI   R AIA+     
Sbjct: 27  KEDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGTH-YTPSAGIPELREAIAEKYKRR 81

Query: 103 LPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFD 161
               + P+ ++ +TAG K+A+ +    L  PG  +L+P PG+P YEA  +    +     
Sbjct: 82  YGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVP 141

Query: 162 LL-PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
           L   E G++ DL+ LEA     T A+++ +P NP G V++ ++L+ I E AR+  I++IS
Sbjct: 142 LDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIIS 201

Query: 221 DEVYDHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
           DE+Y+ L + G+     + + G+    IT+ S SK + + GWR+GW+V   P  ++  LR
Sbjct: 202 DEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVV-GPPEELIAALR 260

Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCI 338
            + S      ++S   T  Q A        + D    ++ +  R+  D+  + + EI  +
Sbjct: 261 KLKS-----YLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGL 315

Query: 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRIT 395
           +  + PEG+ ++  K+       + D  EFA +L +E  V V+PG   G    + ++R++
Sbjct: 316 SVVKPPEGAFYLFPKIP-----ELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS 370

Query: 396 FAIEPSALEEGLGRIKAFCQRHA 418
            A     LEE L R+  F   + 
Sbjct: 371 LATSEETLEEALRRLARFLAEYR 393

Length = 393

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  212 bits (543), Expect = 6e-65
 Identities = 112/383 (29%), Positives = 186/383 (48%), Gaps = 30/383 (7%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIADYLN 100
           R +I LG G+P  F     TP   + + +A   A       Y+P+ GI   R AIA  L 
Sbjct: 31  RDVISLGAGEPD-FD----TP---EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLK 82

Query: 101 SELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHF 160
            +      P  V +T G KQA+      L  PG  +++P P +  Y    +         
Sbjct: 83  RDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFV 142

Query: 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
               E G+++ ++ LEA     T A+++ +P NP G V++ ++L+ IA+ A +  I V+S
Sbjct: 143 PTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLS 202

Query: 221 DEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275
           DE+Y+ L +    +  +    S  P      IT+   SK + + GWRLG+     P  ++
Sbjct: 203 DEIYEKLVYDGAEFTSI---ASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG--PKELI 257

Query: 276 QELRIVDSIKGYLNISSGPATFVQ-GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334
           + +  + S     + +S P +  Q  AV  +  N  +D   ++     +  D+  D + E
Sbjct: 258 KAMSKLQS-----HSTSNPTSIAQYAAVAAL--NGPQDEVEEMRQAFEERRDLMVDGLNE 310

Query: 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI 394
           IP + CP KPEG+ +V   ++  L + I+D +EFA  L +E  V V+PG+A G   ++R+
Sbjct: 311 IPGLECP-KPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRL 369

Query: 395 TFAIEPSALEEGLGRIKAFCQRH 417
           ++A     LEEGL RI+ F +  
Sbjct: 370 SYATSLEDLEEGLERIERFLESL 392

Length = 393

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score =  189 bits (482), Expect = 4e-56
 Identities = 111/377 (29%), Positives = 178/377 (47%), Gaps = 12/377 (3%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +I L  GDP  F  F+      +A   A++    + Y PS G+   R AI      +   
Sbjct: 32  VIRLNIGDPVKFD-FQPPEHMKEAYCRAIKEGH-NYYGPSEGLPELREAIVKREKRKNGV 89

Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
            ++PDDV +TA   +A+Q+I   L  PG  IL+P P +P Y    +        +  + E
Sbjct: 90  DITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEE 149

Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
           +GW+ D+D +     E T A+ ++NP NP G ++  + L++I + A +  + VISDE+YD
Sbjct: 150 EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD 209

Query: 226 HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285
            +T+    +V  G     VPVI +  +SK +   GWRLG++   DP G L E+R  ++I 
Sbjct: 210 LMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVR--EAID 266

Query: 286 GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345
               I   P T  Q A          D+  + +  L++  D  Y R+ EIP I+   KP+
Sbjct: 267 KLARIRLCPNTPAQFAAIA-GLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTT-KPQ 324

Query: 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNW-LRITFAIEPSAL 403
           G+ ++  ++     +   DD EF L +  E  V+ + G   G       R+ F      L
Sbjct: 325 GAFYIFPRIEEGPWK---DDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEIL 381

Query: 404 EEGLGRIKAFCQRHAKQ 420
           EE + R + F +     
Sbjct: 382 EEAMDRFEEFMRERLGS 398

Length = 398

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  186 bits (474), Expect = 3e-55
 Identities = 95/378 (25%), Positives = 159/378 (42%), Gaps = 32/378 (8%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
              I LG  +        T P  A A  DA+     + Y P+ G+   R A+A +L    
Sbjct: 1   TDKINLGSNEYLGDS--GTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSP 58

Query: 104 PCKLSPDD-VYLTAGCKQAIQVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFD 161
             KL  +  V   +G    I+ ++ +L   PG  IL+P P +P Y    R    E+  + 
Sbjct: 59  VLKLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYP 118

Query: 162 LLPEKGWEVDLDGLEALADENT---VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV 218
           L     + +D D LEA   E T     ++  +P NP G V T ++L+K+ + A++  I++
Sbjct: 119 LYSSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILL 178

Query: 219 ISDEVYDHLTFGSTPYVRMGVFGST-VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277
           + DE Y    FGS   V      +    ++ +GS SK + + GWR+G+++ +    ++ +
Sbjct: 179 LVDEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAA--VISQ 236

Query: 278 LRIVDSIKGYLNISSGPATFVQGAVPQIFKNT--KEDFFSKIVDILRDTADICYDRIKEI 335
           LR +         SS   T +Q A      +         ++   +++  D   D ++  
Sbjct: 237 LRKLAR----PFYSS---THLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAA 289

Query: 336 --PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLR 393
               +      +   F++  L+          +  A  L +E  V V PG + G   WLR
Sbjct: 290 GLSVL----PSQAGFFLLTGLDPEA------ALALAQVLLEEVGVYVTPGSSFGGPGWLR 339

Query: 394 ITFA-IEPSALEEGLGRI 410
           IT A      LEE L  I
Sbjct: 340 ITVAGGTEEELEELLEAI 357

Length = 357

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score =  166 bits (424), Expect = 2e-47
 Identities = 107/408 (26%), Positives = 184/408 (45%), Gaps = 60/408 (14%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           E +   I+ L  G+P+ F  F         V+  + +A+   YS S G+  AR+AI  Y 
Sbjct: 29  EEEGHKILKLNIGNPAPFG-FEAPDEILRDVIRNLPTAQ--GYSDSKGLFSARKAIMQYY 85

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA-------NARH 152
             +    +  DD+Y+  G  + I + +  L   G  +L+P P +PL+ A          H
Sbjct: 86  QQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVH 145

Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
              +        E GW  DLD + +     T A+VI+NP NP G V++ + L++I E AR
Sbjct: 146 YLCD-------EEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIAR 198

Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272
           +  +++ +DE+YD + +    ++ +      +  +T   +SK + V G+R+GW+V S P 
Sbjct: 199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPK 258

Query: 273 GILQELRIVDSIKGYLNISSG-------PATF-VQGAV--PQIFKNTKEDFFSKIVDI-- 320
                      I+G L++ +        PA   +Q A+   Q            I ++  
Sbjct: 259 K-----HAKGYIEG-LDMLASMRLCANVPAQHAIQTALGGYQ-----------SINELIL 301

Query: 321 ----LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376
               L +  D  ++ +  IP ++C  KP+G+++   KL+  +   I DD +F L L  +E
Sbjct: 302 PGGRLYEQRDRAWELLNAIPGVSC-VKPKGALYAFPKLDPKVYP-IHDDEQFVLDLLLQE 359

Query: 377 SVIVLPGMAVGMKNW-----LRITFAIEPSALEEGLGRIKAFCQRHAK 419
            V+++ G      NW      RI        LEE +GRI  F   + +
Sbjct: 360 KVLLVQGTGF---NWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGYRQ 404

Length = 404

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score =  165 bits (420), Expect = 4e-47
 Identities = 112/396 (28%), Positives = 178/396 (44%), Gaps = 64/396 (16%)

Query: 46  IIPL--GHGDPSAFPCFRTTP-VAADAVVDAVRSAE-FDCYSPSVGILPARRAIADYLNS 101
           ++PL  G  D         TP    DA   A+   E F  Y+ ++GI   R A+A Y++ 
Sbjct: 26  VLPLWFGESD-------LPTPDFIRDAAAAALADGETF--YTHNLGIPELREALARYVSR 76

Query: 102 ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP-LYEA----NARHTRLE 156
                  P+ + +T+   QA+ +    L  PG  ++   P +P L  A     AR   + 
Sbjct: 77  LHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVP 136

Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           +         GW +DLD L A     T A+ I +P NP G   +   L+ I    R+ G+
Sbjct: 137 LDF----GGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGL 192

Query: 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVP-----------VITLGSMSKRWIVPGWRLGW 265
            +++DEVY+ L +           G   P           +I + S SK W + GWRLGW
Sbjct: 193 WIVADEVYERLYYAP---------GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW 243

Query: 266 LVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQ-GAVPQIFKNTKEDFFSKIVDILR 322
           LV   P  + Q L         L    +S  A FVQ  AV  +  +  EDF +++V  LR
Sbjct: 244 LVA--PPALGQVL-------EKLIEYNTSCVAQFVQRAAVAAL--DEGEDFVAELVARLR 292

Query: 323 DTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382
            + D   D ++ +P +    KP+G+M+   +     + G++D +  A +L  E  + + P
Sbjct: 293 RSRDHLVDALRALPGVEVA-KPDGAMYAFFR-----IPGVTDSLALAKRLVDEAGLGLAP 346

Query: 383 GMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQR 416
           G A G   + +LR  FA +P+ L+E + R++ F  R
Sbjct: 347 GTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLAR 382

Length = 382

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score =  150 bits (380), Expect = 2e-40
 Identities = 102/383 (26%), Positives = 181/383 (47%), Gaps = 34/383 (8%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVGILPARRAIADYLNSEL 103
           I+ L  G+P+ F  FRT     D VV  +     D   YS S G+  AR+AI  Y   + 
Sbjct: 148 ILKLNIGNPAPFG-FRT----PDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKG 202

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163
              +  DD+Y   G  + I + ++ L   G  +L+P P +PL+ A          H+   
Sbjct: 203 LPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCD 262

Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223
            +  W  D+D + +     T A+VI+NP NP G ++  + LQ+I + AR+  +++ SDE+
Sbjct: 263 EQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEI 322

Query: 224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
           YD L      +  +      +  +T   +SK  ++ G+R+GW++ S    I +     D 
Sbjct: 323 YDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK-----DY 377

Query: 284 IKGYLNI-------SSGPA-TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335
           I+G LN+       S+ PA + VQ A+      + +D+       + +  ++ Y+ +  I
Sbjct: 378 IEG-LNMLANMRLCSNVPAQSIVQTALGG--HQSVKDYLVP-GGRVYEQRELVYNALNAI 433

Query: 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW---- 391
           P I+   KP+ + ++  K+++     I DD +FAL L  ++ V+++ G      NW    
Sbjct: 434 PGISA-VKPKAAFYIFPKIDVKKFN-IHDDEQFALDLLHDKKVLIVQGTGF---NWDKPD 488

Query: 392 -LRITFAIEPSALEEGLGRIKAF 413
             R+ +      LE+ + R+  F
Sbjct: 489 HFRVVYLPRLEDLEDAMDRLADF 511

Length = 517

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score =  144 bits (365), Expect = 1e-38
 Identities = 100/396 (25%), Positives = 169/396 (42%), Gaps = 40/396 (10%)

Query: 41  NDPRPIIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98
            D   +I    G  DPS FP       A   V+    ++    Y P+ G+   R AIA Y
Sbjct: 86  EDDPSVIDFAGGLPDPSLFP-LEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAY 144

Query: 99  LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIR 158
           L +       P+ + +T+G +QA+ ++L +L  PG  +L+  P +P            + 
Sbjct: 145 LLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVI 204

Query: 159 HFDLLP--EKGWEVDLDGLEALADENTVAMVIVNP--GNPCGNVFTYQQLQKIAEKARKL 214
               +P  E G   D + LE    +     V V P   NP G   + ++ + +   A K 
Sbjct: 205 ---PVPVDEDGI--DPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKY 259

Query: 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI 274
            +++I D+ Y  L +   P   +    +   VI LGS SK  + PG RLG++V   P  +
Sbjct: 260 DVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVA--PPEL 316

Query: 275 LQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA----DICYD 330
           +++L      +       GP++  Q A+     +     + + +  LR       D   +
Sbjct: 317 IEKLL-----RLKQAADLGPSSLSQAALAAFLLS---GHYDRHLRRLRREYARRRDALLE 368

Query: 331 RIKEI-PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM- 388
            + E  P +    +PEG +F+ ++L     EGI D  E  L  A E+ V+V P  +    
Sbjct: 369 ALAEYLPELATWTRPEGGLFLWLELP----EGI-DAREL-LAAALEKGVVVTPLGSAFSA 422

Query: 389 ----KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419
               +N LR++F+      +EEG+ R+ A  +  A 
Sbjct: 423 DGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA 458

Length = 459

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score =  139 bits (353), Expect = 1e-37
 Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 17/332 (5%)

Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+ S G +     I  Y +         +++  T G    + + L  +  PG  +++ +P
Sbjct: 62  YTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEP 121

Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            F  Y+        +    +   E G+++++  LEAL    T A+++ +P NP G VF+ 
Sbjct: 122 YFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSK 181

Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPG 260
           + L++IA+ A +  + +ISDEVYD  +F    +V M    G     IT GS SK + + G
Sbjct: 182 ETLEEIAKIAIEYDLFIISDEVYDGFSF-YEDFVPMATLAGMPERTITFGSFSKDFAMTG 240

Query: 261 WRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320
           WR+G+++   P  I++  +I++       I     T  Q A     K+        I + 
Sbjct: 241 WRIGYVIA--PDYIIETAKIINE-----GICFSAPTISQRAAIYALKHRDT-IVPLIKEE 292

Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV 380
            +   +  Y RI+ IP ++    P+GS++  + +  + L      +EF  +L KE  V+V
Sbjct: 293 FQKRLEYAYKRIESIPNLSL-HPPKGSIYAFINIKKTGL----SSVEFCEKLLKEAHVLV 347

Query: 381 LPGMAVGM--KNWLRITFAIEPSALEEGLGRI 410
           +PG A G   + ++R+   +    LEE   RI
Sbjct: 348 IPGKAFGESGEGYIRLACTVGIEVLEEAFNRI 379

Length = 384

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score =  138 bits (350), Expect = 6e-37
 Identities = 100/360 (27%), Positives = 174/360 (48%), Gaps = 35/360 (9%)

Query: 63  TPVAADAVVDAVRSAEFDC--YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
           TP   +   +A+++ + +   YS S GI   R A A Y        + PD++ +T G  +
Sbjct: 44  TP---EVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKK-WGIDVEPDEILITNGGSE 99

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV-DLDGLEALA 179
           AI   +  +  PG  IL+P+P +  Y   A    ++I       E+G+ +   + +E L 
Sbjct: 100 AILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLI 159

Query: 180 DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV 239
              T A++I NPGNP G V+T ++L+ +AE A+K  + +ISDEVY    +    Y     
Sbjct: 160 TPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALS 219

Query: 240 F-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFV 298
             G    VI + S+SKR+   G R+G L++ +   I   +++  +      +S  P T  
Sbjct: 220 LEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQA-----RLS--PPTLE 272

Query: 299 Q-GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357
           Q GA   +  +T E +F ++ +  +   DI Y+ + +IP + C  KP+G+ +++ KL   
Sbjct: 273 QIGAAALL--DTPESYFDEVREEYKKRRDILYEELNKIPGVVCE-KPKGAFYIIAKLP-- 327

Query: 358 LLEGISDDMEFALQLAKE-----ESVIVLPGMAV----GM-KNWLRITFAIEPSALEEGL 407
               + D  +FA  L  +     E+V+V P        G+ KN +RI + +    L+  +
Sbjct: 328 ----VDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAM 383

Length = 397

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score =  131 bits (330), Expect = 3e-34
 Identities = 102/372 (27%), Positives = 178/372 (47%), Gaps = 27/372 (7%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +I LG G+P     F T     +A   A+    +  Y+P+ GI   R AIA+Y       
Sbjct: 35  VISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYGV 89

Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
            +  D+V +TAG  +A  +    L   G  +++P P F  Y  +A+    +     L  E
Sbjct: 90  DVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREE 149

Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
             ++ D D L  L  + T  +VI  P NP G     +  + IA+ A    I ++SDE Y+
Sbjct: 150 NEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE 209

Query: 226 HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285
           H  +    +  M  +      I   S SK + + GWRLG+++   P  +++++     IK
Sbjct: 210 HFLYEGAKHYPMIKYAPD-NTILANSFSKTFAMTGWRLGFVIA--PEQVIKDM-----IK 261

Query: 286 GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD----ICYDRIKEIPCITCP 341
            +  I    A+FVQ A  +  ++ KE +  K V+ +R   +    +   R+KE+P I   
Sbjct: 262 LHAYIIGNVASFVQIAGIEALRS-KESW--KAVEEMRKEYNERRKLVLKRLKEMPHIK-V 317

Query: 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIE 399
            +P+G+ +V   ++ +   G+S + +FA  L ++  V+V+PG A G   + ++RI++A  
Sbjct: 318 FEPKGAFYVFANIDET---GMSSE-DFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATS 373

Query: 400 PSALEEGLGRIK 411
              L E + R++
Sbjct: 374 KEKLIEAMERME 385

Length = 391

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score =  130 bits (329), Expect = 2e-33
 Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 66/387 (17%)

Query: 82  YSPSVGILPARRAIADYLN--SELPCKLSPDDVYLTAGCKQAIQVILTVLAR-PGANILL 138
           Y+ S G    R+A+A ++     +P    P D++LT G    I+++L +L   P   +++
Sbjct: 111 YTDSAGYPFVRKAVAAFIERRDGVPK--DPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI 168

Query: 139 PKPGFPLYEA-----NARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMV 187
           P P +PLY A       +        + L  EKGW +D + LE   ++         A+V
Sbjct: 169 PIPQYPLYSAAITLLGGKQV-----PYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALV 223

Query: 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY------DHLTFGSTPYVRMGV-- 239
           ++NPGNP G V T   +++I +   + GI++++DEVY          F S   V + +  
Sbjct: 224 VINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPA 283

Query: 240 -FGSTVPVITLGSMSKRWIVP-GWRLGW--LVTSDPSGILQELRIVDSIKGYLNISSG-- 293
            + + V +++  S SK  I   G R G+  L    P    Q  ++  SI    N+ S   
Sbjct: 284 EYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLA-SI----NLCSNVV 338

Query: 294 ----------PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343
                     P      + P  +K  ++  F      L+  A++  D + +I  ++C + 
Sbjct: 339 GQLMTGLMCNPPREGDASYPL-YKRERDAIF----TSLKRRAELLTDELNKIEGVSC-QP 392

Query: 344 PEGSMFVMVKLNLS-------LLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLR 393
            EG+M+   ++ L           G++ D+ + L+L +   ++V+PG   G K      R
Sbjct: 393 VEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFR 452

Query: 394 ITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           IT       +EE + +IK F +   K+
Sbjct: 453 ITILPPEEQIEEMVKKIKEFHESFMKK 479

Length = 481

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score =  128 bits (323), Expect = 4e-33
 Identities = 108/399 (27%), Positives = 183/399 (45%), Gaps = 66/399 (16%)

Query: 46  IIPLGHGDPSAFPCFRTTP----VAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNS 101
           I+ L  G+P     F TTP     AA   +DA +S     Y+   G+L  R+A AD++  
Sbjct: 32  ILKLTLGEPD----F-TTPDHVKEAAKRAIDANQSH----YTGMAGLLELRQAAADFVKE 82

Query: 102 ELPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE--ANARH-TRLEI 157
           +     +P++ + +T G  +A+   LT +  PG  +LLP P +P YE   N      +EI
Sbjct: 83  KYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEI 142

Query: 158 ----RHFDLLPEKGWEVDLDGLEA--LADENTVAMVIVN-PGNPCGNVFTYQQLQKIAEK 210
                 F L PE         LE   L   + +  VI+N P NP G  ++ +Q++ +A+ 
Sbjct: 143 DTTENDFVLTPEM--------LEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADV 194

Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVT 268
            +K  I VISDEVY  LT+   P+V +  +   +P   I +  +SK   + GWR+G +  
Sbjct: 195 LKKYDIFVISDEVYSELTYTGEPHVSIAEY---LPDQTILINGLSKSHAMTGWRIGLIFA 251

Query: 269 SDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDF------FSKIVD-IL 321
                   E      IK +  + +   T  Q A  +   N K+D       + K  D I+
Sbjct: 252 P------AEF-TAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYII 304

Query: 322 RDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL 381
               D+ +  I          KP+G+ ++  K+     +   D  +F    A++++V  +
Sbjct: 305 EKMTDLGFKII----------KPDGAFYIFAKIPAGYNQ---DSFKFLQDFARKKAVAFI 351

Query: 382 PGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
           PG A G   + ++R+++A     ++E + R+K + + HA
Sbjct: 352 PGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEHA 390

Length = 391

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score =  122 bits (308), Expect = 3e-31
 Identities = 105/372 (28%), Positives = 167/372 (44%), Gaps = 23/372 (6%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +I LG GDP   P   T     +A+  A  + E   Y    G+L  R+A+AD+       
Sbjct: 31  VISLGIGDPD-LP---TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGV 86

Query: 106 KLSPDDVYLT-AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
           +L P+   L+  G K+ I  I      PG  +L+P PG+P+Y         E     L  
Sbjct: 87  ELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKE 146

Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
           E G+  D D +     +    M I  P NP G V   +  +++ E A++  I+V  D  Y
Sbjct: 147 ENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAY 206

Query: 225 DHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
             +TF G      + V G+    I   S+SK + + GWR+G  V +  + ++  L  V +
Sbjct: 207 SEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN--ADLIAGLGKVKT 264

Query: 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343
                N+ SG    +Q A      N  +D   +I  I +   D+  + +K+I  I    K
Sbjct: 265 -----NVDSGVFQAIQYAAIAAL-NGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDV-EK 316

Query: 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPS 401
           P+ + +V V +     EG +   EFA +L +E  V+V PG+  G   + ++RI+  +   
Sbjct: 317 PKATFYVWVPVP----EGYT-SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDE 371

Query: 402 ALEEGLGRIKAF 413
            LEE + RIK  
Sbjct: 372 RLEEAVARIKKL 383

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score =  121 bits (306), Expect = 8e-31
 Identities = 95/400 (23%), Positives = 161/400 (40%), Gaps = 59/400 (14%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
           R I+ L  G+P     F T      A V A+   E   Y+   G    R+AI   L    
Sbjct: 33  RSIVDLTVGEPD----FDTPDHIKQAAVAAIERGETK-YTLVNGTPALRKAIIAKLERRN 87

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP-------------GFPLYEANA 150
               + +++ +  G KQAI + L      G  +++P P             G P+  A  
Sbjct: 88  GLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACP 147

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
                    F L PE         LEA     T  +++  P NP G V++  +L+ +A+ 
Sbjct: 148 EEQG-----FKLTPEA--------LEAAITPRTRWLILNAPSNPTGAVYSRAELRALADV 194

Query: 211 -ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLG 264
             R   ++V++D++YDH+ F   P        +  P     V+    +SK + + GWR+G
Sbjct: 195 LLRHPHVLVLTDDIYDHIRFDDEP---TPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIG 251

Query: 265 WLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324
           +     P+ ++  +  + S       SS P++  Q A      N  + F ++ V + +  
Sbjct: 252 YAA--GPADLIAAINKLQS-----QSSSCPSSISQAAAAAAL-NGDQSFVTESVAVYKQR 303

Query: 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG--------ISDDMEFALQLAKEE 376
            D     +  IP ++C   P+G+ ++ V  N + L G        +  D +  L L    
Sbjct: 304 RDYALALLNAIPGLSC-LVPDGAFYLYV--NCAGLIGKTTPEGKVLETDQDVVLYLLDSA 360

Query: 377 SVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
            V V+ G A G+  + R++ A     LEE   RI+     
Sbjct: 361 GVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAA 400

Length = 402

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score =  120 bits (304), Expect = 2e-30
 Identities = 91/357 (25%), Positives = 166/357 (46%), Gaps = 56/357 (15%)

Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y P+ G    R AIA+ LN      L+ D + +T G   A+ V L  +  PG  +++  P
Sbjct: 69  YMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAP 128

Query: 142 GFPLYEANARHTRLEIRHFDLLP--EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
            F  Y     +   ++    ++P     ++ DLD LEA     T A++I +P NP G V+
Sbjct: 129 YFVEYRFYVDNHGGKLV---VVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVY 185

Query: 200 TYQQLQKIA----EKARKLG--IMVISDEVYDHLTFGST--PYVRMGVFGSTVPVITLGS 251
           + + L+ +A    EK+++ G  I +ISDE Y  + +     PY+    + +++ V+   S
Sbjct: 186 SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYI-FKYYDNSI-VVY--S 241

Query: 252 MSKRWIVPGWRLGWLVTS----DPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFK 307
            SK   +PG R+G++  +    D   ++  L   + I G++N    PA   Q  V     
Sbjct: 242 FSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVN---APALM-QRVV----- 292

Query: 308 NTKEDFFSKIVDILRDTA------DICYDRIKEI--PCITCPRKPEGSMFVMVKLNLSLL 359
                  +K +D   D +      D+ YD + E+   C+    KP+G+ ++  K   S  
Sbjct: 293 -------AKCLDATVDVSIYKRNRDLLYDGLTELGFECV----KPQGAFYLFPK---SPE 338

Query: 360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
           E   DD+ F  + AK+ +++++PG   G   + R+++ ++   +E  L   +   + 
Sbjct: 339 E---DDVAF-CEKAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKE 391

Length = 394

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score =  119 bits (301), Expect = 3e-30
 Identities = 100/362 (27%), Positives = 156/362 (43%), Gaps = 38/362 (10%)

Query: 65  VAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQ 123
            A +A+   V       Y P  GI   R AIA         +  PD +V +T G  +AI 
Sbjct: 45  AAQEAIAGGVNQ-----YPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIA 99

Query: 124 VILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLP-EKGWEVDLDGLEALA 179
             +  L  PG  +LL +P +  Y A    A   R       L+P  +G+ +DLD L A  
Sbjct: 100 AAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHR---VPVPLVPDGRGFALDLDALRAAV 156

Query: 180 DENTVAMVIVN-PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238
              T   +IVN P NP G V T  +L  IAE A +  ++VI+DEVY+HL F    ++ + 
Sbjct: 157 TPRT-RALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLA 215

Query: 239 VF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPAT 296
              G     +T+ S +K + V GW++GW     P+ ++  +R   + K YL  +   P  
Sbjct: 216 TLPGMRERTVTISSAAKTFNVTGWKIGW--ACGPAPLIAAVR---AAKQYLTYVGGAP-- 268

Query: 297 FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356
             Q AV     + ++ + + + D L+   D     + E           G+ F+    + 
Sbjct: 269 -FQPAVAHAL-DHEDAWVAALRDSLQAKRDRLAAGLAEAGFEVHD--SAGTYFLCA--DP 322

Query: 357 SLLEGISDDMEFALQLAKEESVIVLPGMAV------GMKNWLRITFAIEPSALEEGLGRI 410
             L G  D  EF   L +   V  +P M+V         + +R  F      L+E + R+
Sbjct: 323 RPL-GYDDGTEFCRALPERVGVAAIP-MSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRL 380

Query: 411 KA 412
           +A
Sbjct: 381 RA 382

Length = 387

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score =  118 bits (297), Expect = 1e-29
 Identities = 101/377 (26%), Positives = 169/377 (44%), Gaps = 28/377 (7%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSEL 103
           +I LG G+P     F T     +A   ++RS E  +  Y+ + G+L  R+ IA YL    
Sbjct: 22  VISLGVGEPD----FVTPWNVREA---SIRSLEQGYTSYTANAGLLELRQEIAKYLKKRF 74

Query: 104 PCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL 162
                P+D + +T G  QA+ V +  +  PG  +L+ +P F  Y                
Sbjct: 75  AVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVAT 134

Query: 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
             E  ++V    +EA     T A+++ +P NP G V    +L++IA    K  ++V+SDE
Sbjct: 135 TLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDE 194

Query: 223 VYDHLTFGSTPYVRMG-VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           +Y  LT+    Y     + G     I +   SK + + GWRLG+   + P    + +   
Sbjct: 195 IYAELTY-DEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF--IAAPVYFSEAML-- 249

Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP 341
             I  Y ++   P T  Q A  +  +   +D   ++ D  R   +       EI  +TC 
Sbjct: 250 -KIHQY-SMMCAP-TMAQFAALEALRAGNDD-VIRMRDSYRKRRNFFVTSFNEIG-LTCH 304

Query: 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIE 399
             P G+ +    ++ +   G+S + EFA QL  EE V V+PG   G   + ++R ++A  
Sbjct: 305 -VPGGAFYAFPSISST---GLSSE-EFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATS 359

Query: 400 PSALEEGLGRIKAFCQR 416
              L+E + R+K F + 
Sbjct: 360 LEQLQEAMKRMKRFVEN 376

Length = 378

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score =  117 bits (296), Expect = 2e-29
 Identities = 98/384 (25%), Positives = 166/384 (43%), Gaps = 40/384 (10%)

Query: 47  IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK 106
           I LG G  S  P     P A +A+ + + + E   Y    GI P   AI   L  +   +
Sbjct: 30  ISLGQGVVSYPP----PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIE 85

Query: 107 LSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP- 164
           L+ +  + +TAG   A    +  +  PG  I+L  P    Y  N  H  + I      P 
Sbjct: 86  LNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTP----YYFN--H-EMAITMAGCQPI 138

Query: 165 ----EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
               +  +++  + +E      T A+V ++P NP G V+    L+ + +   + GI  IS
Sbjct: 139 LVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHIS 198

Query: 221 DEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL- 278
           DE Y++ T+    +   G   GS    I+L S+SK +    WR+G++V   P  +L+ + 
Sbjct: 199 DEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVI--PIHLLEAIK 256

Query: 279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI 338
           +I D+I     I   P    Q A     +   + +  + +  +     I    + ++   
Sbjct: 257 KIQDTIL----IC--PPVVSQYAALGALQ-VGKSYCQQHLPEIAQVRQILLKSLGQLQDR 309

Query: 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN--WLRITF 396
                  G+ +  +K+N  L     +D E   QL +E  V V+PG   GMKN  +LRI +
Sbjct: 310 CTLHPANGAFYCFLKVNTDL-----NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAY 364

Query: 397 -AIEPSALEEGLGR----IKAFCQ 415
            A++ +  +EG+ R    +K   Q
Sbjct: 365 GALQKATAKEGIERLVQGLKTIVQ 388

Length = 389

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score =  118 bits (296), Expect = 2e-29
 Identities = 99/375 (26%), Positives = 167/375 (44%), Gaps = 33/375 (8%)

Query: 47  IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK 106
           I LG G    FP F       +A + A+R  + + Y+   G+     AIA+    +    
Sbjct: 57  INLGQG----FPNFDGPDFVKEAAIQAIRDGK-NQYARGFGVPELNSAIAERFKKDTGLV 111

Query: 107 LSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
           + P+ +V +T+GC +AI   +  L  PG  ++L  P +  YEA       +I+   L P 
Sbjct: 112 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP 171

Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
             + V  D L+A     T A++I  P NP G +FT ++L+ IA   ++  ++  +DEVYD
Sbjct: 172 D-FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYD 230

Query: 226 HLTFGSTPYVRM----GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
            L F    ++ M    G++  TV   T+ S+ K + + GW++GW +   P  +   +R  
Sbjct: 231 KLAF-EGDHISMASLPGMYERTV---TMNSLGKTFSLTGWKIGWAIA--PPHLTWGVRQA 284

Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP 341
            S      ++   AT +Q A     +   E ++ ++        DI  + +KE+     P
Sbjct: 285 HS-----FLTFATATPMQWAAVAALR-APESYYEELKRDYSAKKDILVEGLKEVGFKVYP 338

Query: 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-----KNWLRITF 396
               G+ FVMV        G  +D+ F   L +E  V  +P     +     KN +R  F
Sbjct: 339 --SSGTYFVMVDHTPF---GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF 393

Query: 397 AIEPSALEEGLGRIK 411
             +   L   + R+K
Sbjct: 394 CKDEETLRAAVERMK 408

Length = 413

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score =  116 bits (292), Expect = 5e-29
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 27/263 (10%)

Query: 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221
           L  E GW  DLD L  L   NT  + I N  NP G +     L++I E AR +   V+SD
Sbjct: 133 LKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSD 192

Query: 222 EVYDHLTFGSTPYVRMGVFGSTVPV----ITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277
           EVY  L          G   S   +    I+  SMSK + +PG R+GW+  +      +E
Sbjct: 193 EVYRPLD-------EDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN------EE 239

Query: 278 L-RIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336
           +  I+   + Y  I +G        +  +    ++    +   I+R    I  + + + P
Sbjct: 240 VIDILRKYRDYTMICAG---VFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEP 296

Query: 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF 396
            ++   KP+      VKL++ +        +F L+L KE  V+++PG    ++  +RI +
Sbjct: 297 RVSYV-KPKAVSTSFVKLDVDM-----PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGY 350

Query: 397 AIEPSALEEGLGRIKAFCQRHAK 419
             +   L++GL ++  F +    
Sbjct: 351 CCDTETLKKGLKKLSEFLREFDS 373

Length = 373

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score =  114 bits (288), Expect = 2e-28
 Identities = 94/386 (24%), Positives = 168/386 (43%), Gaps = 41/386 (10%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +I L  G P  FP       AA   +       +  Y+ + G+L  R+A  +++  +   
Sbjct: 30  LISLTIGQPD-FPTPSHVKEAAKRAITE----NYTSYTHNAGLLELRKAACNFVKDKYDL 84

Query: 106 KLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
             SP+ ++ +T G  +AI +    +  PG  ++LP P +P YE   R    +    D   
Sbjct: 85  HYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS 144

Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
             G+ +  + LE    E T  +V+  P NP G   + ++LQ IA+  +   I V+SDE+Y
Sbjct: 145 T-GFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIY 203

Query: 225 DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI 284
             L +                 I +  +SK   + GWR+G+L    PS + + +     +
Sbjct: 204 SELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA--PSYLAKHI-----L 256

Query: 285 KGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT----ADICYDRIKE--IPCI 338
           K +    +  ++  Q A  +     K+D       ++R       D  Y+R+    +   
Sbjct: 257 KVHQYNVTCASSISQYAALEALTAGKDD-----AKMMRHQYKKRRDYVYNRLISMGLDVE 311

Query: 339 TCPRKPEGSMFV---MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLR 393
               KP G+ ++   +    +S         +FAL L +E  + V+PG A     + ++R
Sbjct: 312 ----KPTGAFYLFPSIGHFTMS-------SFDFALDLVEEAGLAVVPGSAFSEYGEGYVR 360

Query: 394 ITFAIEPSALEEGLGRIKAFCQRHAK 419
           +++A     L+EGL R++AF Q+ AK
Sbjct: 361 LSYAYSIETLKEGLDRLEAFLQQKAK 386

Length = 387

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score =  111 bits (280), Expect = 2e-27
 Identities = 96/393 (24%), Positives = 164/393 (41%), Gaps = 51/393 (12%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           E   R II +G G+P     F       +A   A+R      Y+ ++G+ P R AIA + 
Sbjct: 26  ERAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRGVTQ-YTSALGLAPLREAIAAWY 80

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH 159
                  ++P+ + +TAG   A+ +    L   G  +L+P P +P    N        RH
Sbjct: 81  ARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYP---CN--------RH 129

Query: 160 F--------DLLP---EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIA 208
           F         L+P    + +++    +EA   E T  +++ +P NP G      +L++I 
Sbjct: 130 FVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIV 189

Query: 209 EKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268
           E  R  G   I DE+Y  L++ + P   +   G    VIT+ S SK + + GWRLGWLV 
Sbjct: 190 EAVRARGGFTIVDEIYQGLSYDAAPVSALS-LGDD--VITINSFSKYFNMTGWRLGWLVV 246

Query: 269 SDP-----SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323
            +        + Q L I  S    L   +  A F    +  I++  + +F  +     RD
Sbjct: 247 PEALVGTFEKLAQNLFICASA---LAQHAALACFEPDTL-AIYERRRAEFKRR-----RD 297

Query: 324 TADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383
                 + +        P  P+G+ +V             D       +  +  V+++PG
Sbjct: 298 FIVPALESLG----FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPG 353

Query: 384 MAVGM---KNWLRITFAIEPSALEEGLGRIKAF 413
              G    ++++R+++A   S LEE + R+   
Sbjct: 354 RDFGPHAPRDYIRLSYATSMSRLEEAVARLGKL 386

Length = 388

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score =  107 bits (269), Expect = 5e-26
 Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 48/312 (15%)

Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
           ++A+ADY        + P+ + L  G  + I++++     PG  +L+P P + +YE +A+
Sbjct: 60  KQALADYYG------VDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAK 113

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
               E+    L  +   ++DL+ +    D+    + + +P NP GN+ +   ++ + E+ 
Sbjct: 114 IHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERT 171

Query: 212 RKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-------VITLGSMSKRWIVPGWRLG 264
            +  ++V+ DE Y    F   P        ST+P       +I L ++SK + + G R+G
Sbjct: 172 PEDALVVV-DEAYGE--FSGEP--------STLPLLAEYPNLIVLRTLSKAFGLAGLRIG 220

Query: 265 WLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324
           + + ++   I    ++        N+S   A     A+  +     +DF  K V+ +   
Sbjct: 221 YAI-ANAEIIDALNKVRAP----FNLSR-LA--QAAAIAAL---RDDDFIEKTVEEINAE 269

Query: 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP-G 383
            +  YD +K++P +     P  + FV+++           D +   +   E+ +IV    
Sbjct: 270 RERLYDGLKKLPGLEV--YPSDANFVLIRFP--------RDADALFEALLEKGIIVRDLN 319

Query: 384 MAVGMKNWLRIT 395
              G+ N LRIT
Sbjct: 320 SYPGLPNCLRIT 331

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score =  105 bits (263), Expect = 3e-25
 Identities = 94/339 (27%), Positives = 146/339 (43%), Gaps = 36/339 (10%)

Query: 83  SPSVGILPARRAIADYLNSELPCKLSPDD---VYLTAGCKQAIQVILTVLARPGANILLP 139
            PS+G    R AIAD        +    D   V  T G  +AI ++LT L RPG  +++ 
Sbjct: 48  GPSLGGEGLRAAIAD--------RWRGGDAHVVMTTHGSSEAIYLVLTALLRPGDEVVVV 99

Query: 140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN-PGNPCGNV 198
            P +      A  T  E+R + LL  +G+  DLD L AL    T   V+VN P NP G  
Sbjct: 100 DPAYHSLSHLAVATGCEVRPWPLLAVRGFRPDLDALRALLTPRT-RAVVVNFPHNPTGAS 158

Query: 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258
            T ++L ++ E+A + G +++ D  +  L   + P            VI+ G++SK + +
Sbjct: 159 VTPRELDELLERAARSGAVLLWDNAFADLVHDAPPLPDPSALYDR--VISFGTLSKAFGL 216

Query: 259 PGWRLGWLVTSDPSGILQEL-RIVDSIKGYLNISSGPAT--FVQGAVPQIFKNTKEDFFS 315
           PG R+GW V   P+ +L EL R+ D    Y  +S  P      + AV        +    
Sbjct: 217 PGLRVGWCVG--PADLLAELVRLRD----YTTLSLSPLVELLAEVAV-----EHADALIG 265

Query: 316 KIVDILRDTADICYDRIKEIP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAK 374
             +   R       D     P  + C   PEG +    +       G +D  +   +L  
Sbjct: 266 PRLAEARANRRRLLDWAAAHPDVVRCT-PPEGGVAAFPR-----FPGHADVTDLCRRLLA 319

Query: 375 EESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413
              V+++PG   G  + +R+ F    + L  GL R+ AF
Sbjct: 320 RHGVLLVPGSCFGAADRMRLGFGGSSAELRAGLARLSAF 358

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  103 bits (259), Expect = 1e-24
 Identities = 68/306 (22%), Positives = 136/306 (44%), Gaps = 34/306 (11%)

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
            R A+A+Y        + P++V +  G  + I++++     PG  +L+P+P F +YE  A
Sbjct: 62  LRAALAEYYGV-----VDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAA 116

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
           +    E+      P K + +DLD + A   + T  + + NP NP G +   ++L+ + E 
Sbjct: 117 QLAGAEVVKV---PLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEA 173

Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
             + G++VI DE Y    F     + +  +     +I L + SK + + G R+G+ + + 
Sbjct: 174 LPEGGLVVI-DEAYIE--FSPESSLELLKYPP--NLIVLRTFSKAFGLAGLRVGYAIANP 228

Query: 271 PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD 330
              ++  L  V   +   N+SS        A+         D+  + V+ +R+  +  Y 
Sbjct: 229 --ELIAALNKV---RPPFNVSSPALAAAIAAL------RDADYLEESVERIREERERLYA 277

Query: 331 RIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-K 389
            +K +        P  + FV+V++          +     +   ++ ++V    +VG+  
Sbjct: 278 ALKALGLFGVF--PSQANFVLVRVP-------DAEAAALAEALLKKGILVRDCSSVGLLP 328

Query: 390 NWLRIT 395
            +LRIT
Sbjct: 329 GYLRIT 334

Length = 356

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score =  102 bits (257), Expect = 4e-24
 Identities = 95/365 (26%), Positives = 161/365 (44%), Gaps = 31/365 (8%)

Query: 60  FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119
           F T P   +A+ + V    F  Y      L A  AIA +       ++ P+ +    G  
Sbjct: 37  FPTPPEIIEALRERVDHGVFG-YPYGSDELYA--AIAHWFKQRHQWEIKPEWIVFVPGVV 93

Query: 120 QAIQVILTVLARPGANILLPKPGF-PLYEANARHTRLEIRHFDLLPEKG-WEVDLDGLE- 176
             I + +  L +PG  +++  P + P Y A   + R ++    L+ + G +E+D D LE 
Sbjct: 94  PGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGR-KVIENPLVEDDGRYEIDFDALEK 152

Query: 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236
           A  DE     ++ NP NP G V+T ++L+KIAE   + G+ VISDE++  L  G   ++ 
Sbjct: 153 AFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIP 212

Query: 237 MGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI-KGYLNISSG 293
                       ITL S SK + + G +  +++ S+     + L+ +        +    
Sbjct: 213 FASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGI 272

Query: 294 PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-KEIPCITCPRKPEGSMFVMV 352
            AT           N  E +  ++++ L+D  D   D + K +P +    +P+G+    +
Sbjct: 273 IATEAA-------YNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKV-TEPQGTYLAWL 324

Query: 353 ---KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGL 407
              +L L       DD E A  L +E  V + PG   G     ++R+ FA   + LEE L
Sbjct: 325 DCRELGL-------DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEAL 377

Query: 408 GRIKA 412
            R+K 
Sbjct: 378 ERLKR 382

Length = 388

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score =  101 bits (254), Expect = 9e-24
 Identities = 97/394 (24%), Positives = 164/394 (41%), Gaps = 31/394 (7%)

Query: 26  TVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS 85
           ++ S L   K+  K      +I L  G+P   P         + +V      E   Y+ S
Sbjct: 15  SIFSELGAYKKE-KIAAGHKMIDLSIGNPDMPP----ADFVREEMVHTANQKESYGYTLS 69

Query: 86  VGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFP 144
            GI     A+ +Y N+     L+ D +V L  G +  +  +  V A PG  IL+P PG+ 
Sbjct: 70  -GIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYT 128

Query: 145 LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVN-PGNPCGNVFTY 201
            YE   +       +  L  E  +  D   LE + +E  +   M+I+N PGNP   +   
Sbjct: 129 AYETGIQMAGATSYYMPLKKENDFLPD---LELIPEEIADKAKMMILNFPGNPVPAMAHE 185

Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260
              +++   A+K  I+V+ D  Y    F G+ P   + V G+    + + S+SK + + G
Sbjct: 186 DFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAG 245

Query: 261 WRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320
            R+G+++ ++   I++ L    S     N   G    +Q A     +N    F  K   I
Sbjct: 246 SRIGYMIGNEE--IVRALTQFKS-----NTDYGVFLPIQKAACAALRNG-AAFCEKNRGI 297

Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV 380
            ++  D   D  +         KP GSMFV  ++           + FA  L    +V+V
Sbjct: 298 YQERRDTLVDGFRTFGWNV--DKPAGSMFVWAEIPKGW-----TSLSFAYALMDRANVVV 350

Query: 381 LPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412
            PG A G   + ++RI    +   L++ +  I+ 
Sbjct: 351 TPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384

Length = 399

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score =  100 bits (250), Expect = 5e-23
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 6/203 (2%)

Query: 68  DAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILT 127
           + V + V   +   Y P+ G+L  R  +A+  N     +++PDD+    G   AI  I  
Sbjct: 55  EIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG 114

Query: 128 VLARPGANILLPKPGFPLYE-ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN--TV 184
           +L R  A ++ P P +  +  A A H       + L PE  W  DLD LE     N    
Sbjct: 115 LL-RREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIA 173

Query: 185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF-GSTPYVRMGVFGST 243
            ++++NP NP G V+  + L++I + AR+  + +I DE+Y+++ + G        V G  
Sbjct: 174 GILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD- 232

Query: 244 VPVITLGSMSKRWIVPGWRLGWL 266
           VP I L  +SK    PG R GW+
Sbjct: 233 VPGIALKGISKELPWPGSRCGWI 255

Length = 433

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 96.5 bits (241), Expect = 5e-22
 Identities = 97/372 (26%), Positives = 163/372 (43%), Gaps = 27/372 (7%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +I LG GDP   P   T     +A+  AV   E   Y    G+L  R+A+AD+       
Sbjct: 33  VISLGIGDPD-LP---TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGV 88

Query: 106 KLSPDDVYLTA-GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
           +L P+   ++  G K+ I  I      PG  +L+P PG+P+Y+        E     L  
Sbjct: 89  ELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKE 148

Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
           E G+  DLD +     +    M I  P NP G V   +  +++ + A+K  I+V  D  Y
Sbjct: 149 ENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAY 208

Query: 225 DHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
             + + G  P   + V G+    I   S+SK + + GWR+G+ V +  + ++  L  V S
Sbjct: 209 SEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN--ADLIAGLGKVKS 266

Query: 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--PCITCP 341
                N+ SG    +Q A      N  ++   ++  I ++  DI  + ++++        
Sbjct: 267 -----NVDSGVFQAIQEAGIAAL-NGPQEVVEELRKIYQERRDILVEGLRKLGLEV---- 316

Query: 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIE 399
             P+ + +V   +     +G +   EFA  L  +  V+V PG   G   + + RI   + 
Sbjct: 317 EPPKATFYVWAPVP----KGYT-SAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVP 371

Query: 400 PSALEEGLGRIK 411
              +EE + RIK
Sbjct: 372 DERIEEAVERIK 383

Length = 385

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 96.1 bits (240), Expect = 7e-22
 Identities = 94/385 (24%), Positives = 146/385 (37%), Gaps = 74/385 (19%)

Query: 22  TATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC 81
           T   TV SAL               I L  G    FP F   P   +A+  A+  A  + 
Sbjct: 17  TTIFTVMSALAAEHG---------AINLSQG----FPDFDGPPYLVEALAYAMA-AGHNQ 62

Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPK 140
           Y P  G+   R AIA         +   D ++ +TAG  +A+   +  L RPG  +++  
Sbjct: 63  YPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFD 122

Query: 141 PGFPLYEAN-------ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN-PG 192
           P +  Y          A    L+   F         VD     A     T  ++I+N P 
Sbjct: 123 PSYDSYAPAIELAGGRAVRVALQPPDF--------RVDWQRFAAAISPRT-RLIILNTPH 173

Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGS 251
           NP G V++   ++ + +      I V+SDEVY+H+ F    +  +            + S
Sbjct: 174 NPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSS 233

Query: 252 MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS------GPATFVQG----- 300
             K + V GW++G+ V   P+ +  E R V     Y   +         A +++      
Sbjct: 234 FGKTYHVTGWKVGYCVA--PAALSAEFRKVHQ---YNTFTVNTPAQLALADYLRAEPEHY 288

Query: 301 -AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359
             +P  F   K D F      L ++      R K +PC       EG+ F +V  +    
Sbjct: 289 LELPA-FYQAKRDRF---RAALANS------RFKLLPC-------EGTYFQLVDYS---- 327

Query: 360 EGISD--DMEFALQLAKEESVIVLP 382
             ISD  D+EF   L +E  V  +P
Sbjct: 328 -AISDLDDVEFCQWLTREHGVAAIP 351

Length = 386

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 92.4 bits (230), Expect = 1e-20
 Identities = 83/352 (23%), Positives = 146/352 (41%), Gaps = 46/352 (13%)

Query: 82  YSPSVGILPA-RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140
           Y+ + G LPA R AIA +        + P+ + +T G   A+ +  ++L  PG + LL  
Sbjct: 65  YTAARG-LPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLAD 123

Query: 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200
           PG+P      R      +   + P+  +++    +E   + +TV  ++ +P NP G + +
Sbjct: 124 PGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLS 183

Query: 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260
             +L  +++  R  G  ++ DE+Y  LT+G      + V         L S SK + + G
Sbjct: 184 RDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDD---AFVLNSFSKYFGMTG 240

Query: 261 WRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV-----PQ---IFKNTKED 312
           WRLGWLV   P   + EL   + +   L IS   +T  Q A      P+   I +  + +
Sbjct: 241 WRLGWLVA--PPAAVPEL---EKLAQNLYIS--ASTPAQHAALACFEPETLAILEARRAE 293

Query: 313 FFSKIVDILRDTADICYDRIKEIPCIT-----CPRKPEGSMFVMVKLNLSLLEGISDDME 367
           F  +     RD           +P +         +P+G+ ++    ++S   G  D   
Sbjct: 294 FARR-----RDFL---------LPALRELGFGIAVEPQGAFYLYA--DISAFGG--DAFA 335

Query: 368 FALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQR 416
           F     + E V   PG+  G       +R  +      L+E + RI    + 
Sbjct: 336 FCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLRS 387

Length = 387

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 90.8 bits (226), Expect = 5e-20
 Identities = 99/386 (25%), Positives = 169/386 (43%), Gaps = 42/386 (10%)

Query: 47  IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK 106
           I LG G P           AADA++D       + Y P +G+   R+A+A +        
Sbjct: 29  INLGQGFPDDPGPEDVRRAAADALLDG-----SNQYPPMMGLPELRQAVAAHYARFQGLD 83

Query: 107 LSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY-------EANARHTRLEIR 158
           L P+ +V +T+G  +A+   L  L  PG  ++L +P +  Y           R  RLE  
Sbjct: 84  LDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPP 143

Query: 159 HFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV 218
           H        W +    L A     T A+++ NP NP G VF  ++L  +AE  ++   + 
Sbjct: 144 H--------WRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVA 195

Query: 219 ISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277
           I DEV++H+ F    ++  M + G     + +GS  K + + GW++G+ V + P      
Sbjct: 196 ICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGF-VCAAPP----L 250

Query: 278 LRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI-- 335
           LR++     +L  ++ P   +Q AV        +D+F  +   L  + D     ++ I  
Sbjct: 251 LRVLAKAHQFLTFTTPP--NLQAAVAYGL-GKPDDYFEGMRADLARSRDRLAAGLRRIGF 307

Query: 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV----GMKNW 391
           P +      +G+ F+ V L    L    DD+ F  +L +E  V  +P  A      + + 
Sbjct: 308 PVLPS----QGTYFLTVDLAPLGLAE--DDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSV 361

Query: 392 LRITFAIEPSALEEGLGRIKAFCQRH 417
           +R  FA   + L+E + R+ A  +R 
Sbjct: 362 VRFCFAKRDATLDEAVERLAAARRRR 387

Length = 387

>gnl|CDD|177876 PLN02231, PLN02231, alanine transaminase

 Score = 90.8 bits (225), Expect = 1e-19
 Identities = 92/363 (25%), Positives = 165/363 (45%), Gaps = 33/363 (9%)

Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN-ILLPK 140
           YS S GI   R AIA  + +       P+D++LT G   A+ +++ +L R   + IL P 
Sbjct: 164 YSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPI 223

Query: 141 PGFPLYEAN-ARHTRLEIRHFDLLPEKGWEVDLDGLEA-LADENTV-----AMVIVNPGN 193
           P +PLY A+ A H    + ++ L    GW +++  L+  L D  +      A+V++NPGN
Sbjct: 224 PQYPLYSASIALHGGTLVPYY-LDEATGWGLEISELKKQLEDARSKGITVRALVVINPGN 282

Query: 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVY------DHLTFGSTPYV--RMGVFGSTVP 245
           P G V   +  + I E  ++ G+++++DEVY          F S   V   MG     + 
Sbjct: 283 PTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDIS 342

Query: 246 VITLGSMSKRWIVP-GWRLGWL-VTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVP 303
           +++  S+SK +    G R G++ VT   S + +++  V S+    NIS      +  + P
Sbjct: 343 LVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPP 402

Query: 304 QIFKNTKEDFFSK---IVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-- 358
           +    + E + ++   I+  L   A    D +  +  +TC  K EG+M++  +++L    
Sbjct: 403 KPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTC-NKAEGAMYLFPRIHLPQKA 461

Query: 359 -----LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNW-LRITFAIEPSALEEGLGRI 410
                    + D  +  +L     ++V+PG   G     W  R T   +   +   + R+
Sbjct: 462 IKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRL 521

Query: 411 KAF 413
             F
Sbjct: 522 TEF 524

Length = 534

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 89.0 bits (221), Expect = 3e-19
 Identities = 88/351 (25%), Positives = 148/351 (42%), Gaps = 32/351 (9%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           II LG G+P       T     D + +  +      YS S GI   RRA A Y       
Sbjct: 32  IIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGV 87

Query: 106 KLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
           KL+PD  V  T G K+    +   +  PG  IL P P +P++          IR     P
Sbjct: 88  KLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEP 147

Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
           ++ +   L+     +    +A+++  P NP   V      + +   A+K  I+++SD  Y
Sbjct: 148 DEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAY 207

Query: 225 DHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
             + F G+ P   + V G+    +   SMSK + + GWR+G+ V ++        R++ +
Sbjct: 208 SEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE--------RLIAA 259

Query: 284 ---IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK----EIP 336
              +K YL+   G  T +Q A      N  +D  +++ ++ +   D+  +       +IP
Sbjct: 260 LTRVKSYLDY--GAFTPIQVAATAAL-NGPQDCIAEMRELYKKRRDVLVESFGRAGWDIP 316

Query: 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
                  P  SMF    +  +     S  +EF+  L ++  V V PG+  G
Sbjct: 317 ------PPAASMFAWAPIPEAFRHLGS--LEFSKLLVEKADVAVAPGVGFG 359

Length = 405

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 87.2 bits (216), Expect = 7e-19
 Identities = 100/396 (25%), Positives = 172/396 (43%), Gaps = 45/396 (11%)

Query: 32  TIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPA 91
           T+I Q   ++D    + L  G P+ F      P   + V  A+R    + Y+P  GI   
Sbjct: 20  TVIGQLAAQHDA---LNLSQGAPN-FAP---DPALVEGVARAMRDGH-NQYAPMAGIAAL 71

Query: 92  RRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
           R A+A+        +  P  +V + A   + +   ++ L  PG  ++  +P F  Y    
Sbjct: 72  REALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIV 131

Query: 151 R---HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN-PGNPCGNVFTYQQLQK 206
           R    T + I+    L  + + V+ D + A     T  M+IVN P NP   VF+   L +
Sbjct: 132 RLQGATPVAIK----LSPEDFRVNWDEVAAAITPRT-RMIIVNTPHNPSATVFSAADLAR 186

Query: 207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV--PVITLGSMSKRWIVPGWRLG 264
           +A+  R   I+++SDEVY+H+ F    +  M          VI + S  K + V GWR+G
Sbjct: 187 LAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVI-VSSFGKSYHVTGWRVG 245

Query: 265 WLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG-AVPQIFKNTKEDFFSKIVDILRD 323
           + +   P+ ++ E+R V     +   +     F +  A P  +      F+ +  D+L  
Sbjct: 246 YCLA--PAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLG-AFYQRKRDLL-- 300

Query: 324 TADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD--DMEFALQLAKEESVIVL 381
             ++   R + +P        EGS F+     L+     SD  D +F L+L ++  V  +
Sbjct: 301 ARELAGSRFELLP-------SEGSFFM-----LARFRHFSDESDSDFVLRLIRDARVATI 348

Query: 382 PGMAV---GMKNWL-RITFAIEPSALEEGLGRIKAF 413
           P  A    G    L R++F+ + + L EG  R+ + 
Sbjct: 349 PLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCSL 384

Length = 384

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score = 86.7 bits (215), Expect = 1e-18
 Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 23/291 (7%)

Query: 64  PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123
               +A++  +   E+  Y P  G    R  I   L       L  D+  +TAG  +++ 
Sbjct: 44  EEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDDEALITAGATESLY 97

Query: 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL-PEKGWEVDLDGLEALADEN 182
           +++     PG N + P PG+ + +  A     E+    +   E  +++  + ++   DEN
Sbjct: 98  LVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDEN 157

Query: 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242
           T  + +++P NP G+ +T +++++ AE AR     ++ D  Y       T         +
Sbjct: 158 TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHT 217

Query: 243 TVPVITLGSMSKRWIVPGWRLGWLV-TSDPSGILQELRIVDSIKGYLNISSGPATFVQGA 301
               +T  S SK + + G R+G +V T D         +++ +K  +    G     Q A
Sbjct: 218 ----VTSYSFSKIFGMAGLRIGAVVATPD---------LIEVVKSIVINDLGTNVIAQEA 264

Query: 302 VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-EGSMFVM 351
                K  K+++  +I         +  + + EI  +  P  P  G+M V+
Sbjct: 265 AIAGLK-VKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVI 314

Length = 380

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 85.1 bits (211), Expect = 4e-18
 Identities = 78/347 (22%), Positives = 146/347 (42%), Gaps = 24/347 (6%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           II    G+P       T P   + + +  +  +   YS S GI   RRAI+ +       
Sbjct: 31  IIDFSMGNPDG----PTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDV 86

Query: 106 KLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
            + P+ +  +T G K+ +  ++      G  +L+P P +P++   A     ++R   L+ 
Sbjct: 87  DIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVE 146

Query: 165 EKGWEVDLDGLEALADE-NTVAMVIVN-PGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
              +  +L+   A+ +      M+I+  P NP       +  +K+   A++  ++V+ D 
Sbjct: 147 GVDFFNELE--RAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDL 204

Query: 223 VYDHLTFGS--TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280
            Y  + +     P + M V G+    +   ++SK + + GWR+G++V  +P  +    R 
Sbjct: 205 AYADIVYDGWKAPSI-MQVPGAKDVAVEFFTLSKSYNMAGWRIGFMV-GNPELVSALAR- 261

Query: 281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC 340
              IK Y +   G  T +Q A     +   +     I +  +   D+    + E   +  
Sbjct: 262 ---IKSYHDY--GTFTPLQVAAIAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMV- 314

Query: 341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
              P+ SM+V  K+        S  +EFA +L  E  V V PG+  G
Sbjct: 315 -EMPKASMYVWAKIPEPYAAMGS--LEFAKKLLNEAKVCVSPGIGFG 358

Length = 395

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 85.2 bits (211), Expect = 5e-18
 Identities = 89/374 (23%), Positives = 158/374 (42%), Gaps = 31/374 (8%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +I LG G+P         PV  +A + A+   +   Y P  G    R+AI D+ +     
Sbjct: 37  LIDLGMGNPDGAA---PQPVI-EAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGV 92

Query: 106 KLSPDDVYLT-AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
           +L PD   L   G K+ +  +      PG  +L+P P +P +         +I    L P
Sbjct: 93  ELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKP 152

Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
           E  W +DL  +     +    +    P NP       +  ++I   ARK  IM++ D  Y
Sbjct: 153 ENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCY 212

Query: 225 DHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
             L F G  P   + + G+    +   ++SK + + GWR+G++V +    I+Q LR + +
Sbjct: 213 AELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN--RHIIQGLRTLKT 270

Query: 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE----IPCIT 339
                N+  G  + +Q A  +      + +  ++ +  R   D     + E    IP   
Sbjct: 271 -----NLDYGIFSALQKAA-ETALQLPDSYLQQVQERYRTRRDFLIQGLGELGWNIP--- 321

Query: 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA 397
                + +M++ V   + +        +FAL + ++  V+V PG A G   + ++RI+  
Sbjct: 322 ---PTKATMYLWVPCPVGM-----GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI 373

Query: 398 IEPSALEEGLGRIK 411
            +   L E L R+K
Sbjct: 374 ADCDRLGEALDRLK 387

Length = 394

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 84.2 bits (208), Expect = 6e-18
 Identities = 95/368 (25%), Positives = 151/368 (41%), Gaps = 38/368 (10%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +   G GDP       T P    A++DAV   E   Y  ++G    R AI+ +       
Sbjct: 2   LFDFGTGDPKE----PTPPFIRKALIDAV--PEVSQYPSALGTKALREAISGWFERRFGV 55

Query: 106 KLSPD-DVYLTAGCKQAIQVILTVLARPGAN---ILLPKPGFPLYEANARHTRLEIRHFD 161
           KL PD  V  +AG K+AI     V   P  +   ++   PG+P+YE  A     E     
Sbjct: 56  KLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVK 115

Query: 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221
           L  E G+ + L+ +E    E T  + I  P NP G       L++     R+ GI++ SD
Sbjct: 116 LKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSD 175

Query: 222 EVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           E Y  + FG  P+  + V      V+   S+SKR  + G+R G  V  D           
Sbjct: 176 ECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSGMTGYRSG-FVAGDE---------- 222

Query: 282 DSIKGYLNISSGPA----TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC 337
             I     + +        FVQ A    + +  ++   +   I +   D+  +   ++  
Sbjct: 223 KLISFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGL 280

Query: 338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA 397
                 P+ + ++ VK+      GI D  ++AL+L  E  ++V PG   G      +  A
Sbjct: 281 EYLY--PDATFYLWVKVP----SGI-DAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVA 332

Query: 398 IEPSALEE 405
           + P+ LEE
Sbjct: 333 LVPT-LEE 339

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 80.0 bits (198), Expect = 2e-16
 Identities = 75/331 (22%), Positives = 130/331 (39%), Gaps = 67/331 (20%)

Query: 80  DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139
           D Y+P +     R  +A +L       +  + +   AG  + IQ+I   L  PG N ++ 
Sbjct: 63  DGYAPEL-----RTKVAKHLG------VDEEQLLFGAGLDEVIQMISRALLNPGTNTVMA 111

Query: 140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
           +P F  Y  NA     E+R    +P K    DL+ +    DE T  + I NP NP G   
Sbjct: 112 EPTFSQYRHNAIIEGAEVRE---VPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYV 168

Query: 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-------VITLGSM 252
            +++L    E      ++V+ DE Y         YV    +  T+P       +I L + 
Sbjct: 169 NHEELLSFLESVPS-HVLVVLDEAY-------YEYVTAEDYPDTLPLLEKYENLIVLRTF 220

Query: 253 SKRWIVPGWRLGWLVTSDPSGILQELRI------VDSIKGYLNISS-GPATFVQGAVPQI 305
           SK + +   R+G+ + S+   ++++L I         I  Y  I++     F++  V   
Sbjct: 221 SKAYGLAALRVGYGIASEE--LIEKLNIARPPFNTTRIAQYAAIAALEDQAFLKECVE-- 276

Query: 306 FKNTKE-DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD 364
            KN +  + +        +     Y              P  + F+ V          ++
Sbjct: 277 -KNAEGLEQYYAFCK---EYGLFYY--------------PSQTNFIFVDTGRD-----AN 313

Query: 365 DMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395
           ++  AL    ++  IV  G A+G    +RIT
Sbjct: 314 ELFEALL---KKGYIVRSGAALGFPTGVRIT 341

Length = 359

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 79.4 bits (196), Expect = 3e-16
 Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 34/230 (14%)

Query: 63  TPVAADAVVDAVR-----SAEFDCYSPSVGILPARRAIADYLNSELPCK-LSPDDVYLTA 116
           TPV  D V   +R     +A+   Y  + G    R AI D+L        L P  V    
Sbjct: 30  TPV--DPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVI 87

Query: 117 GCKQAIQVILTVLA-RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175
           G K+ +  + T+L   PG  +++P+  +P YE  A                   V  D  
Sbjct: 88  GTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATP------------VAADDP 135

Query: 176 EALADENTVAMVIVN-PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY 234
             L D     ++ +N PGNP G V +  +L+ I   AR+ G +V SDE Y  L +   P 
Sbjct: 136 TEL-DPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRP- 193

Query: 235 VRMGVF------GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278
             + +       G    ++ + S+SKR  + G+R G+ V  DP+ ++ EL
Sbjct: 194 --VSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGF-VAGDPA-LVAEL 239

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 79.9 bits (197), Expect = 3e-16
 Identities = 86/338 (25%), Positives = 147/338 (43%), Gaps = 44/338 (13%)

Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLP 164
           +  PD + LTAG   A +++  +LA PG  +L+P P +P ++ + R  T ++I       
Sbjct: 117 RFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDS 176

Query: 165 EKGWEVDLDGLEALADENTVAM-------VIVNPGNPCGNVFTYQQLQKIAEKARKLGIM 217
              ++V    LEA A +   A        +I NP NP G       L+ I +   +  I 
Sbjct: 177 SNNFQVTPQALEA-AYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIH 235

Query: 218 VISDEVYDHLTFGSTPYVRM-------GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
           ++SDE+Y    F ++ +V +       G  G    V  + S+SK   +PG+R+G  + S 
Sbjct: 236 LVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVG-TIYSY 294

Query: 271 PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD 330
              ++   R + S   +  +SS      Q  +  +  +  E+F    +   R+     Y+
Sbjct: 295 NDKVVTTARRMSS---FTLVSSQ----TQHLLASMLSD--EEFTENYIRTNRERLRKRYE 345

Query: 331 RIKE------IPCITCPRKPEGSMFVMVKLNLS-LLEGISDDMEFAL--QLAKEESVIVL 381
            I +      I C+      +G+  +   +NLS LLE  + + E AL   + +E  + + 
Sbjct: 346 MIVQGLRRAGIECL------KGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNIS 399

Query: 382 PGMA--VGMKNWLRITFA-IEPSALEEGLGRIKAFCQR 416
           PG +       W R+ FA +    LE  L RI  F  R
Sbjct: 400 PGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437

Length = 447

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 78.9 bits (195), Expect = 6e-16
 Identities = 97/394 (24%), Positives = 163/394 (41%), Gaps = 59/394 (14%)

Query: 35  KQNLKENDP-RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-----CYSPSVGI 88
           K+  KE  P   +I +G G+P            AD  V  V   E        Y+ + GI
Sbjct: 34  KRAAKEKHPDMELIDMGVGEPDE---------MADESVVEVLCEEAKKPENRGYADN-GI 83

Query: 89  LPARRAIADYLNSELPCK-LSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY 146
              + A A Y+      K + P  +V  + G K A+ ++ +    PG   L+  PG+P+ 
Sbjct: 84  QEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVT 143

Query: 147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQK 206
             + ++   E+ +  LL E  +  DLD +     E    + +  P NP G V T +  ++
Sbjct: 144 GTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEE 203

Query: 207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL 266
           + + A++  I+V+ D  Y  LTF   P   + V G+    + + S+SK + + GWRL ++
Sbjct: 204 VVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFV 263

Query: 267 VTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAV------PQIFKNTKEDF--- 313
           V ++         IV   K +     N  SG    +Q A       P+I +  +E +   
Sbjct: 264 VGNE--------LIV---KAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRR 312

Query: 314 FSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI--SDDMEFALQ 371
             K+V IL +                    P G+ ++ VK       GI   +  EF+  
Sbjct: 313 LDKLVKILNEVGFKA-------------EMPGGTFYLYVKAPKGTKSGIKFENAEEFSQY 359

Query: 372 LAKEESVIVLPGMAVGMKNWLRITFAIEPSALEE 405
           L KE+ +  +P    G  ++LR +   E    EE
Sbjct: 360 LIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEE 391

Length = 410

>gnl|CDD|177996 PLN02368, PLN02368, alanine transaminase

 Score = 78.7 bits (194), Expect = 7e-16
 Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 23/241 (9%)

Query: 67  ADAVVDA-----VRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121
           ADA+  A     + S     YS S G+   R+ +A+++         P+ ++LT G  + 
Sbjct: 83  ADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKG 142

Query: 122 IQVILTVLAR-PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL----- 175
           +  IL  + R     +L+P P +PLY A        +  + L   + W +D++ L     
Sbjct: 143 VMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVA 202

Query: 176 EALADENTV-AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY------DHLT 228
           +A +   TV AMVI+NPGNP G   +   L++I +   +  ++++ DEVY      D   
Sbjct: 203 QARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERP 262

Query: 229 FGSTPYVRMGV---FGSTVPVITLGSMSK-RWIVPGWRLGWL-VTSDPSGILQELRIVDS 283
           F S   V M +       V +++  ++SK  W   G R G+  +T+ P   ++E+  V S
Sbjct: 263 FISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS 322

Query: 284 I 284
           I
Sbjct: 323 I 323

Length = 407

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 77.8 bits (192), Expect = 1e-15
 Identities = 96/428 (22%), Positives = 156/428 (36%), Gaps = 93/428 (21%)

Query: 31  LTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRS--AEFDCYSPSVG 87
           L  +   +     +P I L  G+P    P F         V++A+R        Y  + G
Sbjct: 15  LAALLAGVTPPASKPPIALSIGEPKHPTPAF---------VLEALRENLHGLSTYPTTKG 65

Query: 88  ILPARRAIADYLNS--ELPCKLSPDDVYLTA-GCKQAIQVIL-TVLARPG-ANILLPKPG 142
           +   R+AIA +L    +LP  + P+   L   G ++A+      V+       +++P P 
Sbjct: 66  LPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPF 125

Query: 143 FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202
           + +YE  A     E    +   E G+  D D +          + + +PGNP G V +  
Sbjct: 126 YQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLD 185

Query: 203 QLQKIAEKARKLGIMVISDEVYDHLTF----------------GSTPYVRMGVFGSTVPV 246
            L+K+ E A + G ++ SDE Y  L F                G   + R  VF      
Sbjct: 186 TLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVF------ 239

Query: 247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS--GPAT--FVQGAV 302
               S+SKR  +PG R G+ V  D           + +K +L   +  G A     Q A 
Sbjct: 240 ---HSLSKRSNLPGLRSGF-VAGD----------AEILKAFLRYRTYHGCAMPIPTQLAS 285

Query: 303 ------PQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--PCITCPRKPEGSMFVMVKL 354
                  Q  +  +  +  K            +  + EI    +     P+   ++  K+
Sbjct: 286 IAAWNDEQHVRENRALYREK------------FAAVLEILGQVLDLEL-PDAGFYLWPKV 332

Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--------KNWLRITFAIEPSALEEG 406
                    DD  FA  L +EE+V VLPG  +          +  +RI          E 
Sbjct: 333 PG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEA 385

Query: 407 LGRIKAFC 414
             RI++F 
Sbjct: 386 AERIRSFI 393

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 77.6 bits (192), Expect = 1e-15
 Identities = 100/407 (24%), Positives = 169/407 (41%), Gaps = 73/407 (17%)

Query: 45  PIIPLGHGDPSAFP----CFRTTPVAADAVVDAVRSAEFD---C-YSPSVGILPARRAIA 96
             I LG G+P+  P     FR      D + D + S +       Y    G      A+A
Sbjct: 31  GAIMLGGGNPAHIPEMEDYFR------DLLADLLASGKLTEALGNYDGPQGKDELIEALA 84

Query: 97  DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN-----ILLP-KPGFPLYEANA 150
             LN      +SP ++ LT G + A   +  + A   A+     IL P  P +  Y    
Sbjct: 85  ALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGY---- 140

Query: 151 RHTRLEIRHF-------DLLPEK--GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
               LE   F       +LLPE    + VD + L    DE+T A+ +  P NP GNV T 
Sbjct: 141 ADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLHI--DEDTGAICVSRPTNPTGNVLTD 198

Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG-SMSKRWIVPG 260
           ++L+K+   AR+  I ++ D  Y    F    +       +  P I L  S+SK  + PG
Sbjct: 199 EELEKLDALARQHNIPLLIDNAYG-PPFPGIIFSEATPLWN--PNIILCMSLSKLGL-PG 254

Query: 261 WRLGWLVTSDPSGILQELRIVDSIKGYLNISS---GPA----TFVQGAVPQIFKNTKEDF 313
            R G +V +D   I      + ++ G ++++    GPA        G + ++ +     F
Sbjct: 255 VRCG-IVIADEEII----EALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPF 309

Query: 314 FSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKL-NLSLLEGISDDMEFALQL 372
           + + V +           + + PC+    KPEG++F+ +   +L     I+   E   +L
Sbjct: 310 YRQKVQLAIALLR---RYLPDEPCLI--HKPEGAIFLWLWFKDLP----IT-TEELYQRL 359

Query: 373 AKEESVIVLPG--MAVGMK-NW------LRITFAIEPSALEEGLGRI 410
            K   V+V+PG     G+  +W      +R+ +  +   +E+G+  +
Sbjct: 360 -KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAIL 405

Length = 416

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 77.0 bits (190), Expect = 2e-15
 Identities = 66/337 (19%), Positives = 139/337 (41%), Gaps = 29/337 (8%)

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEAN 149
              A+ ++L      ++ P+ +    G   ++   +  L  PG  +++  P + P   A 
Sbjct: 65  LYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRALTAPGEGVIVQTPVYPPFLSAV 124

Query: 150 ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE 209
             + R  + +   L    +  DL+ LE    E    +++ +P NP G V+T ++L ++AE
Sbjct: 125 KSNGRELVLNPLKLDPGRYRFDLEDLEDAITEKARLLLLCSPHNPVGRVWTREELTRLAE 184

Query: 210 KARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLV 267
              +  ++V+SDE++  L +    ++ +      +    +TL S  K + + G  + + +
Sbjct: 185 LCLRHNVVVVSDEIHADLVYPPNKHIPLASLSPEIAERTVTLLSPGKTFNIAGLNISFAI 244

Query: 268 TSDP---SGILQELRIVDSIKGY--LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR 322
             +P       +  + V  I+        +  A + +G          E +   ++  LR
Sbjct: 245 IPNPELRRAFQEAAQRV-HIQHGNLFGYVAFEAAYREG----------EPWLDALLAYLR 293

Query: 323 DTADICYDRI-KEIPCITCPRKPEGSMFVMVKLN-LSLLEGISDDMEFALQLAKEESVIV 380
              D+  + I K +P I   R PE +    +    L L     DD +      ++  + +
Sbjct: 294 GNRDLVEEFIAKRLPQIRV-RPPEATYLAWLDCRALGL-----DDADLRAFFIEQAGLGL 347

Query: 381 LPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415
            PG++ G     ++R+ F    S LE+ L R++    
Sbjct: 348 NPGISFGDGGSGFMRLNFGCPRSTLEQALERLRQALA 384

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 46/240 (19%)

Query: 68  DAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILT 127
            A+ +A        Y P  G+   R A A + +      +SP+ V++T+GC QA    + 
Sbjct: 49  RALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMV 108

Query: 128 VLARPGANILLPKPGF-----------------PLYEANARHTRLEIRHFDLLPEKGWEV 170
            LA  G  ++LP P +                 P  E              LLP      
Sbjct: 109 TLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGP-----------GLLP------ 151

Query: 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTF 229
           D    EAL    T A+ +V P NP G V+  + L ++ + AR+ GI +I DE Y D  + 
Sbjct: 152 DPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSG 211

Query: 230 GSTPYVRMGVF-----GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI 284
           G  P+    +F       T  ++ L S SK + + G R+G +V S P+ I +  + +D++
Sbjct: 212 GGAPH---DLFADPDWDDT--LVHLYSFSKSYALTGHRVGAVVAS-PARIAEIEKFMDTV 265

Length = 386

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 75.7 bits (187), Expect = 3e-15
 Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
            R A A Y        L    V    G ++AI ++  +LA     +L+  P +  Y    
Sbjct: 52  LRAAAAAYY------GLPAASVLPVNGAQEAIYLLPRLLAP--GRVLVLAPTYSEYARAW 103

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
           R    E+             DLD L A  +E  +  V+ NP NP G +   + L  +A +
Sbjct: 104 RAAGHEVVELP---------DLDRLPAALEEADLL-VVCNPNNPTGRLIPPETLLALAAR 153

Query: 211 ARKLGIMVISDEVYDHLT--FGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLV 267
            R  G  ++ DE +   T      P        +  P ++ L S++K + + G RLG++V
Sbjct: 154 LRARGGWLVVDEAFIDFTPDASLAPQA------ARFPGLVVLRSLTKFFGLAGLRLGFVV 207

Query: 268 TSDPS--GILQELR 279
            + P+    L+E  
Sbjct: 208 -AHPALIARLREAL 220

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 89/401 (22%), Positives = 155/401 (38%), Gaps = 62/401 (15%)

Query: 36  QNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI 95
           + +  N     + L  G+P     F T     DA+ +   +   + Y  S G    R A 
Sbjct: 16  KEITPNKEYKGLDLTIGEPQ----FETPKFIQDALKN--NAHLLNKYPKSAGEESLREAQ 69

Query: 96  ADYLNSELPCKLSPDDVYLTAGCKQAI----QVILTVLARPGANILLPKPGFPLYEANAR 151
             +       +L  +++  T G ++ +    Q +L     P   I  P P + +YE  A 
Sbjct: 70  RGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNP--TIAYPNPFYQIYEGAAI 127

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLE-ALADENTVAMVIVN-PGNPCGNVFTYQQLQKIAE 209
            +R ++    L  E  +   L+  E    D     +VI+N P NP G   + ++L +  +
Sbjct: 128 ASRAKVLLMPLTKENDFTPSLNEKELQEVD-----LVILNSPNNPTGRTLSLEELIEWVK 182

Query: 210 KARKLGIMVISDEVYDHLTFGSTP--------YVRMGVFGSTVPVITLGSMSKRWIVPGW 261
            A K   ++I+DE Y  +   + P         V    F +   V+ + S+SKR   PG 
Sbjct: 183 LALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKN---VLVINSISKRSSAPGL 239

Query: 262 RLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFS--KIVD 319
           R G+        I  +  I   +K Y        T++  A P   +      +   +  +
Sbjct: 240 RSGF--------IAGDASI---LKKYKAYR----TYLGCASPLPLQKAAAVAWLDDEHAE 284

Query: 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379
             R+         +EI  IT    P  + +V +         + +D EF  +L + E + 
Sbjct: 285 FFRNIYAKNLKLAREILGIT---IPPATFYVWLP--------VDNDEEFTKKLYQNEGIK 333

Query: 380 VLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKAFCQR 416
           VLPG  +G     K ++RI    +   LE+ L  IK + + 
Sbjct: 334 VLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLEN 374

Length = 374

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 74.6 bits (184), Expect = 1e-14
 Identities = 95/395 (24%), Positives = 161/395 (40%), Gaps = 43/395 (10%)

Query: 30  ALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPS 85
           A  + K N K  +   +I LG G+P      + TP   + +V+A++ A        YSP 
Sbjct: 18  ASLVAKVNKKVAEGHDVINLGQGNPD-----QPTP---EHIVEALQEAAENPANHKYSPF 69

Query: 86  VGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFP 144
            G    + A AD+   E    L P+ +V +  G K  +  +   L  PG  IL+P PG+P
Sbjct: 70  RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYP 129

Query: 145 LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL 204
            Y +     R +     L+ E  +  D   +     E    M +  P NP G V T    
Sbjct: 130 DYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFF 189

Query: 205 QKIAEKARKLGIMVISDEVYDHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263
           ++    A+K  I V+ D  Y  + F G  P   +   G+    I L ++SK + + GWR+
Sbjct: 190 EETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRV 249

Query: 264 GWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323
            + V     G    +  ++ ++ +L +S   A  +Q A  +   + +       V  L  
Sbjct: 250 AFAV-----GNESVIEAINLLQDHLFVSLFGA--IQDAAIEALLSDQSC-----VAELVA 297

Query: 324 TADICYDRIKEIPCITC------PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
                Y+  +      C         P+GS F      + + +G + + +FA  L ++  
Sbjct: 298 R----YESRRNAFISACREIGWEVDAPKGSFFAW----MPVPKGYTSE-QFADLLLEKAH 348

Query: 378 VIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRI 410
           V V PG   G   + ++R+    +   L E + RI
Sbjct: 349 VAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERI 383

Length = 389

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 71.9 bits (177), Expect = 8e-14
 Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 34/230 (14%)

Query: 63  TPVAADAVVDAVR-----SAEFDCYSPSVGILPARRAIADYLNSELPC-KLSPDDVYLTA 116
           TPV  D V   ++     +A+   Y  + G    R AI  +L        L P  V    
Sbjct: 36  TPV--DPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVI 93

Query: 117 GCKQAIQVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175
           G K+ +  + T+L   PG  +++P+  +P YE  AR     +            V  D L
Sbjct: 94  GSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATV------------VRADSL 141

Query: 176 EALADENTVAMVIVN-PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY 234
             L  +   A++ +N P NP G V     L+K+   AR+ G +V SDE Y  L + + P 
Sbjct: 142 TELGPQR-PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEP- 199

Query: 235 VRMGVF------GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278
             + +       G    ++ + S+SK+  + G+R G+ V  DP+ ++ EL
Sbjct: 200 --VSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGF-VAGDPA-LVAEL 245

Length = 364

>gnl|CDD|236316 PRK08636, PRK08636, aspartate aminotransferase; Provisional

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 85/325 (26%), Positives = 141/325 (43%), Gaps = 41/325 (12%)

Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPK 140
           YS S GI   R AI ++   +    L P+ +V  T G K+    ++  +  PG   ++P 
Sbjct: 67  YSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPD 126

Query: 141 PGFPLYE-------ANARHTRLEI-RHFDLLPEKGWEVDLDGLEALADENT--VAMVIVN 190
           P +P++         N     LE    F+L  ++ +E     LE    E++     V+VN
Sbjct: 127 PAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFE----NLEKALRESSPKPKYVVVN 182

Query: 191 -PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS--TPYVRMGVFGSTVPVI 247
            P NP          +++   A+K    +ISD  Y  +TF    TP + + V G+    +
Sbjct: 183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSI-LEVEGAKDVAV 241

Query: 248 TLGSMSKRWIVPGWRLGWLVTSDP-SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIF 306
              ++SK + + GWR+G++V +    G L++      IK +L+   G  T +Q A   I 
Sbjct: 242 ESYTLSKSYNMAGWRVGFVVGNKKLVGALKK------IKSWLDY--GMFTPIQVAA-TIA 292

Query: 307 KNTKEDFFSKIVDILRDTADICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLLEGI 362
            +  +    +I +  R   D+  +       E+      +KP  SMFV  K+        
Sbjct: 293 LDGDQSCVEEIRETYRKRRDVLIESFANAGWEL------QKPRASMFVWAKIPEPARHLG 346

Query: 363 SDDMEFALQLAKEESVIVLPGMAVG 387
           S  +EF+ QL  E  V V PG+  G
Sbjct: 347 S--LEFSKQLLTEAKVAVSPGIGFG 369

Length = 403

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 67.0 bits (164), Expect = 4e-12
 Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 21/267 (7%)

Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
           R+ IA +   +L      ++V L  G  + I  I+ V  +P   +L+  P F  YE   +
Sbjct: 60  RKRIASFEQLDL------ENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYERALK 111

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
               EI + +L  E  +  +   LE +  E    + + NP NP G + + ++++KI +K 
Sbjct: 112 AFDAEIEYAELTEETNFAANEIVLEEI-KEEIDLVFLCNPNNPTGQLISKEEMKKILDKC 170

Query: 212 RKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
            K  I +I DE +      +     +    +   +I + + +K + +PG RLG+ +TS+ 
Sbjct: 171 EKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK 230

Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331
           +  L E   +  ++   +I+    TF   A   +  +   ++  K +  +++  D  Y+ 
Sbjct: 231 N--LAE--KLLQMREPWSIN----TFADLAGQTLLDDK--EYIKKTIQWIKEEKDFLYNG 280

Query: 332 IKEIPCITCPRKPEGSMFVMVKLNLSL 358
           + E   I    KP  + F+  KL   +
Sbjct: 281 LSEFKGIK-VYKPSVN-FIFFKLEKPI 305

Length = 354

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 85/387 (21%), Positives = 154/387 (39%), Gaps = 33/387 (8%)

Query: 43  PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSE 102
           P   +   HGD  A      TP A +     V       Y+   G    R  +A  L + 
Sbjct: 38  PGRPVDFSHGDVDAH---EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAF 94

Query: 103 LPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFD 161
               +   D++ +T G + A+ + +      G  + + +P    Y AN +   +E    +
Sbjct: 95  TGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPD---YFANRK--LVEFFEGE 149

Query: 162 LLP--------EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213
           ++P        +K   +DLD LE          +  NP NP G V++ +++ +IA  AR+
Sbjct: 150 MVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARR 209

Query: 214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTSDPS 272
            G  VI D++Y  L +  T Y  +         VIT+   SK   + G+RLG  V     
Sbjct: 210 YGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLG--VAFGSP 267

Query: 273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
            I+  +  + +I     +S   A + Q AV + + +  + +    +   +   D     +
Sbjct: 268 AIIDRMEKLQAI-----VSLRAAGYSQ-AVLRTWFSEPDGWMKDRIARHQAIRDDLLRVL 321

Query: 333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--MKN 390
           + +  +   R P+   ++  +L   L   + D   F   L  +  VIV PG        +
Sbjct: 322 RGVEGVFV-RAPQAGSYLFPRLP-RLAVSLHD---FVKILRLQAGVIVTPGTEFSPHTAD 376

Query: 391 WLRITFAIEPSALEEGLGRIKAFCQRH 417
            +R+ F+ + +A      RI    +R+
Sbjct: 377 SIRLNFSQDHAAAVAAAERIAQLIERY 403

Length = 405

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 65.5 bits (160), Expect = 1e-11
 Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 51/274 (18%)

Query: 34  IKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--------EFDCYSPS 85
           + +  K+N    II LG GD        T P+ A +V++A  +A         F  Y P 
Sbjct: 23  VAEFRKKNPSADIIRLGIGDT-------TQPLPA-SVIEAFHNAVDELASPETFRGYGPE 74

Query: 86  VGILPARRAIA--DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF 143
            G    R AIA  DY       ++ P++++++ G K  +  + ++   P   + +  P +
Sbjct: 75  QGYPFLREAIAENDYRG-----RIDPEEIFISDGAKCDVFRLQSLF-GPDNTVAVQDPVY 128

Query: 144 PLY-----------EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192
           P Y             +      +I +     E  +  +L       + +   + + +P 
Sbjct: 129 PAYLDSNVMAGRAGVLDDDGRYSKITYLPCTAENNFIPELP-----EEPHIDIIYLCSPN 183

Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF---GSTVPVITL 249
           NP G V T +QL+++ + A + G +++ D  Y    F S P +   +F   G+    I  
Sbjct: 184 NPTGTVLTKEQLKELVDYANEHGSLILFDAAYS--AFISDPSLPHSIFEIPGARFCAIEF 241

Query: 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
            S SK     G RLGW V      + +EL   D 
Sbjct: 242 RSFSKTAGFTGVRLGWTV------VPKELTYADG 269

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 64.4 bits (157), Expect = 3e-11
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 38/216 (17%)

Query: 69  AVVDAVRSAEFDCYSPSVGILPA------RRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122
           A V+A+R A     +  V   P         A+AD  +      +SP+ V+L  G   A+
Sbjct: 47  AAVEAIREA-----AERVHSYPKASHADLTAALADRWD------VSPEQVWLANGGDGAL 95

Query: 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG-LEALADE 181
             +   +  PG  +L+P PGF  Y  +AR+   E+R + +     +E   D  L+A   E
Sbjct: 96  DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGE 155

Query: 182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241
             V   + +P NP G+     +++ +AE+  +   +V+ DE Y    F   P        
Sbjct: 156 RIV--YLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGE--FAERP-------- 202

Query: 242 STVPVI-------TLGSMSKRWIVPGWRLGWLVTSD 270
           S V ++        L + SK + + G RLG+ V  +
Sbjct: 203 SAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE 238

Length = 357

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 63.2 bits (154), Expect = 5e-11
 Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 4/164 (2%)

Query: 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE 169
           D + L  G +  I VI   + RPG  ++   P FPL+E         +    + P+ G  
Sbjct: 89  DRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLG-- 146

Query: 170 VDLDGL-EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT 228
            DLD L  A+A    + M   NP NP G+  T  QL ++ +      ++V+ +   ++  
Sbjct: 147 FDLDALCAAVARAPRMLM-FSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA 205

Query: 229 FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272
               P     +    +P I L + SK + + G R+G+ + SDP 
Sbjct: 206 GDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPE 249

Length = 371

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score = 62.8 bits (153), Expect = 7e-11
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 19/148 (12%)

Query: 137 LLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCG 196
           ++  PGF  Y    +    EIR + L    GW++    LEAL  +    + +  P NP G
Sbjct: 98  MIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLD-CLFLCTPNNPTG 156

Query: 197 NVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVIT------- 248
            +   Q LQ IAE+ + L I +I DE + D +          G     +P +        
Sbjct: 157 LLPERQLLQAIAERCKSLNIALILDEAFIDFIP------DETGF----IPQLADNPHLWV 206

Query: 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQ 276
           L S++K + +PG RLG+LV SD + + +
Sbjct: 207 LRSLTKFYAIPGLRLGYLVNSDDAAVAR 234

Length = 356

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 96/405 (23%), Positives = 170/405 (41%), Gaps = 73/405 (18%)

Query: 47  IPLGHGDPSAFP----CFRTTP---VAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           I LG G+P+  P     F+      +A+    +A+ +     Y    G      A+A  L
Sbjct: 33  IMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCN-----YDGPQGKAVLIDALAKML 87

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL---YEANARHTRLE 156
             E    ++  ++ LT G + A   +  + A   ++    K   PL   Y   A    LE
Sbjct: 88  RREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYA-DAGLE 146

Query: 157 IRHF-------DLLPEK--GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKI 207
              F       +LLP     + VD + L     E+T A+ +  P NP GNV T ++L K+
Sbjct: 147 EDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GESTGAICVSRPTNPTGNVLTDEELAKL 204

Query: 208 AEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWR 262
              AR+ GI +I D  Y        P+  + +F    P     +I   S+SK  + PG R
Sbjct: 205 DALARQHGIPLIIDNAY------GVPFPGI-IFSDATPLWNENIILCMSLSKLGL-PGSR 256

Query: 263 LGWLVTSDPSGILQELRIVDSIKGYLNISS---GPATFVQ----GAVPQIFKNTKEDFFS 315
            G ++ ++     + ++ + ++ G ++++    GPA   +    G + ++ +     F+ 
Sbjct: 257 CGIIIANE-----KVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYR 311

Query: 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKL-NLSLLEGISDDMEFALQLAK 374
             V     T  I    + E  C+    KPEG++F+ +   +L     I+   E   Q  K
Sbjct: 312 NRVQT---TIAILRRYLPEYRCLI--HKPEGAIFLWLWFKDLP----ITT--EELYQRLK 360

Query: 375 EESVIVLPG--MAVGM-KNW------LRITFAIEPSALEEGLGRI 410
              V+++PG     G+ K W      +R+ +  EP  +E+G+  +
Sbjct: 361 ARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAIL 405

Length = 417

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 27/257 (10%)

Query: 84  PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF 143
           P  G    R+ IA+ L+ ++      + V   +G  + IQ+I   + + G NI+     F
Sbjct: 62  PDGGATTLRQTIANKLHVKM------EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATF 115

Query: 144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203
           P Y  +A     E++    +       DLD + ++ D +T  + I NP NP G     ++
Sbjct: 116 PQYRHHAIIEGCEVKE---VALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRK 172

Query: 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263
           L +  E   +  ++VI +  Y+++T    P   + +      ++ L + SK + +  +R+
Sbjct: 173 LTQFIEGISENTLIVIDEAYYEYVTAKDFPET-LPLLEKHKNILVLRTFSKAYGLASFRV 231

Query: 264 GWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI--- 320
           G+ V  +   ++++L +V   +   N+SS      Q A    F +  ++F  +IV +   
Sbjct: 232 GYAVGHEE--LIEKLNVV---RLPFNVSS----LAQKAATIAFGD--DEFIEEIVRVNTE 280

Query: 321 -LRDTADICYDRIKEIP 336
            LR     C +   EIP
Sbjct: 281 GLRQYESFCKE--NEIP 295

Length = 366

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 59.9 bits (145), Expect = 6e-10
 Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 39/229 (17%)

Query: 72  DAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR 131
           + V+S++ + Y         R  +A Y      C + P ++++  G  + I +I+     
Sbjct: 46  EIVKSSQVNIYPDPTAE-KLREELARY------CSVVPTNIFVGNGSDEIIHLIMLAFIN 98

Query: 132 PGANILLPKPGFPLYE-----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAM 186
            G  ++ P P F +Y      A A    ++++       + +  D+     + ++    +
Sbjct: 99  KGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK-------EDYTYDVGSFIKVIEKYQPKL 151

Query: 187 VIV-NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245
           V + NP NP G+V   + + KI EK+R  GI+V+ DE Y    +G+T    +  F +   
Sbjct: 152 VFLCNPNNPTGSVIEREDIIKIIEKSR--GIVVV-DEAYFEF-YGNTIVDVINEFEN--- 204

Query: 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGP 294
           +I L ++SK + + G R+G+ V +            ++I  YLN+   P
Sbjct: 205 LIVLRTLSKAFGLAGLRVGYAVAN------------ENILKYLNLVKSP 241

Length = 351

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 59.1 bits (144), Expect = 1e-09
 Identities = 65/256 (25%), Positives = 97/256 (37%), Gaps = 38/256 (14%)

Query: 31  LTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILP 90
           L  +   +      P I L  G+P       T     DA+   +       Y  + G+  
Sbjct: 16  LRALFAGVTPPADLPPISLSIGEPK----HPTPAFIKDALAANL--DGLASYPTTAGLPA 69

Query: 91  ARRAIADYLNS--ELPCKLSPDDVYLTA-GCKQAI-QVILTVLAR--PGANILLPKPGFP 144
            R AIA +L     LP  L P    L   G ++A+     TV+ R  PG  ++ P P + 
Sbjct: 70  LREAIAAWLERRYGLP-ALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQ 128

Query: 145 LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL 204
           +YE  A     E    +  P   +  D D + A     T  + + +PGNP G V      
Sbjct: 129 IYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDW 188

Query: 205 QKIAEKARKLGIMVISDEVYDHLTF----------------GSTPYVRMGVFGSTVPVIT 248
           +K+   + + G ++ SDE Y  + F                G   + R+ VF        
Sbjct: 189 KKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVF-------- 240

Query: 249 LGSMSKRWIVPGWRLG 264
             S+SKR  VPG R G
Sbjct: 241 -HSLSKRSNVPGLRSG 255

Length = 396

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 58.7 bits (143), Expect = 2e-09
 Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 6/115 (5%)

Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170
           DV L  G  + IQ++    A+PGA +L P+PGF +Y  +A+   LE     L  +  + +
Sbjct: 83  DVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD--FTL 140

Query: 171 DLDG-LEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
           DL   L A+A+     + +  P NP GN+F    +++I E A   G++V+ DE Y
Sbjct: 141 DLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAP--GLVVV-DEAY 192

Length = 356

>gnl|CDD|178069 PLN02450, PLN02450, 1-aminocyclopropane-1-carboxylate synthase

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 25/204 (12%)

Query: 89  LPA-RRAIADYLNSEL---PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP 144
           LPA + A+A+++ SE+        P+ + LTAG   A + ++  LA PG   LLP P +P
Sbjct: 88  LPAFKNALAEFM-SEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYP 146

Query: 145 LYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGN 197
            ++ + +  T +EI         G+++    LE    +          ++I NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGT 206

Query: 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF-----GST-----VPV 246
             T  +L  + +      I +ISDE+Y    F S  +V  M V       +T     V +
Sbjct: 207 TTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHI 266

Query: 247 ITLGSMSKRWIVPGWRLGWLVTSD 270
           +   S+SK   +PG+R+G + ++D
Sbjct: 267 VY--SLSKDLGLPGFRVGAIYSND 288

Length = 468

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 59/269 (21%)

Query: 74  VRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG 133
           ++   F+ Y P +   P R AIA++        L  +++ +  G  + I  ++ +    G
Sbjct: 44  LKRVPFNRY-PHITSDPLREAIAEFYG------LDAENIAVGNGSDELISYLVKLFE--G 94

Query: 134 ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193
            +I++  P F +Y   A+   + +    L  ++ + +D + +   A  N  A+ I +P N
Sbjct: 95  KHIVITPPTFGMYSFYAKLNGIPVIDVPL--KEDFTIDGERIAEKAK-NASAVFICSPNN 151

Query: 194 PCGNVFTYQQLQKIAE--KARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGS 251
           P GN      LQ   E  K  + G  V+ DE Y   +  S     +G+      +I L +
Sbjct: 152 PTGN------LQPEEEILKVLETGKPVVLDEAYAEFSGKSL----IGLIDEYPNLILLRT 201

Query: 252 MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG-----YLNISSGPATFVQGAVPQIF 306
            SK + + G R G+ + ++         I+D++        LNI +              
Sbjct: 202 FSKAFGLAGIRAGYAIANE--------EIIDALYRIKPPFSLNILT-------------- 239

Query: 307 KNTKEDFFSKIVDILRDTADICYDRIKEI 335
                    KIV +  D  D+  +RI  I
Sbjct: 240 --------MKIVRLALDHYDLIEERIDYI 260

Length = 337

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 55.9 bits (136), Expect = 1e-08
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
           + A+A+         + P+ + L  G  + ++++      PG  ++  + GF +Y   A+
Sbjct: 73  KAALAEK------FGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQ 126

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
               +      +P K +  DLD + A     T  + I NP NP G     +++++     
Sbjct: 127 AVGAKPVE---VPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGV 183

Query: 212 RKLGIMVISDEVY 224
               ++V+ DE Y
Sbjct: 184 PP-DVLVVLDEAY 195

Length = 367

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 17/195 (8%)

Query: 87  GILPARRAIADYLNSELPCKLS--PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP 144
           G+   R+AIA ++      K++  P+ V ++ G   A + I+  LA PG   L+P P + 
Sbjct: 95  GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYA 154

Query: 145 LYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLE------ALADENTVAMVIVNPGNPCGN 197
            ++ + R  T +EI          +++ +D  +        +++    +++ NP NP G 
Sbjct: 155 AFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214

Query: 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG------- 250
           +     L  +     +  I ++ DE+Y    F    +V +    + V +  +        
Sbjct: 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274

Query: 251 -SMSKRWIVPGWRLG 264
            S+SK   +PG+R+G
Sbjct: 275 YSLSKDMGLPGFRVG 289

Length = 496

>gnl|CDD|180947 PRK07366, PRK07366, succinyldiaminopimelate transaminase; Validated

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 85/376 (22%), Positives = 142/376 (37%), Gaps = 57/376 (15%)

Query: 64  PVAADAVVDAVRSAEFDCYSPSV-------GILPARRAIADYLNSELPCKLSPD-DVYLT 115
           P  A   ++A+  +  D   PS        G L  R A A +        + P+ +V   
Sbjct: 43  PAPAH-ALEAIAQSLHD---PSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPL 98

Query: 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175
            G ++    +   +  PG   LL  PG+P +         +I    L  E  +      +
Sbjct: 99  IGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADI 158

Query: 176 EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV 235
                     MV+  P NP   +      Q+     ++  ++++ D       F   PYV
Sbjct: 159 PTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHD-------F---PYV 208

Query: 236 RMGVFGSTVPV-------------ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282
            + VF   V               I   ++SK + + G+R+G+ + +  + ++Q LR V 
Sbjct: 209 DL-VFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN--AQLIQALRQVK 265

Query: 283 SI---KGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339
           ++     Y  I +G    + G  PQ           + V I R   D   + + +I    
Sbjct: 266 AVVDFNQYRGILNGAIAALTG--PQ-------ATVQQTVQIFRQRRDAFINALHQIGW-P 315

Query: 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA 397
            P  PE +M+V  KL     +G S  +EF  QL  +  V   PG   G   + ++R    
Sbjct: 316 VP-LPEATMYVWAKL-PEPWQGNS--VEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV 371

Query: 398 IEPSALEEGLGRIKAF 413
            +P  LEE + RI AF
Sbjct: 372 HDPDILEEAVERIAAF 387

Length = 388

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 70  VVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL 129
           V++A+ + +F    P       R A+A+         L  +++ +  G  + I +++  +
Sbjct: 70  VLEALGNMKFPYVYPDPESRRLRAALAED------SGLESENILVGCGADELIDLLMRCV 123

Query: 130 ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG-LEALADENTVAMVI 188
             PG  I+   P F +Y  +A     E+      P   + +D+   +EA+       + +
Sbjct: 124 LDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTP--DFSLDVPRIVEAVETHKPKLLFL 181

Query: 189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248
            +P NP G++ +   L KI E    L I+V+ DE Y  + F +    RM        +I 
Sbjct: 182 TSPNNPDGSIISDDDLLKILE----LPILVVLDEAY--IEFSTQE-SRMKWVKKYDNLIV 234

Query: 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278
           L + SKR  + G R+G+   + P  I++ L
Sbjct: 235 LRTFSKRAGLAGLRVGY--GAFPLSIIEYL 262

Length = 380

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 50.8 bits (122), Expect = 7e-07
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 25/142 (17%)

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR---PGANILLPKPGFPL-Y 146
           AR A+A +LN++     S D++  T G  +A+ ++   L R   PG  I++      L +
Sbjct: 71  AREAVARFLNAD-----SSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVV----SDLEH 121

Query: 147 EAN-------ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
            +N       A+ T  ++R   L  +    +DLD LE L    T  + + +  N  G V 
Sbjct: 122 HSNIVPWQELAKRTGAKVRVIPLDDD--GLLDLDALEKLITPKTKLVALSHVSNVTGTV- 178

Query: 200 TYQQLQKIAEKARKLGIMVISD 221
               +++IAE A + G +V+ D
Sbjct: 179 --NPVKEIAELAHEHGALVLVD 198

Length = 405

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 49.9 bits (120), Expect = 2e-06
 Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 20/120 (16%)

Query: 154 RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE---K 210
            LE+ H +   E  W+     LE L D +  A+ +VNP NP     + + L+KIA+   +
Sbjct: 213 DLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNE 272

Query: 211 ARKLGIMVISDEVY----DHLTFGSTPYVRMGVFGSTVPVITLG--SMSKRWIVPGWRLG 264
            R   +M+I+D+VY    D   F S          + +P  T+   S SK +   GWRLG
Sbjct: 273 KRP-DLMIITDDVYGTFVDD--FRS--------LFAVLPYNTILVYSFSKYFGATGWRLG 321

Length = 527

>gnl|CDD|99738 cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

 Score = 48.7 bits (117), Expect = 3e-06
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 23/122 (18%)

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV------DLDG 174
           AI  +L  L + G +++       LY      T        LLP+ G EV      D + 
Sbjct: 67  AISTVLLALLKAGDHVVASDD---LYGG----TYRLFER--LLPKLGIEVTFVDPDDPEA 117

Query: 175 LEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY 234
           LEA     T  + + +P NP   V     ++ IAE A + G +++ D      TF +   
Sbjct: 118 LEAAIKPETKLVYVESPTNPTLKVV---DIEAIAELAHEHGALLVVDN-----TFATPYL 169

Query: 235 VR 236
            R
Sbjct: 170 QR 171

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life. Length = 369

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 48.0 bits (115), Expect = 5e-06
 Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 17/171 (9%)

Query: 68  DAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL---TAGCKQAIQV 124
             +++ +   E   Y+P  GI   R    + +  E P  LS   + L   T      + +
Sbjct: 26  QDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSL 84

Query: 125 ILTVLARPGANILLPKPGFPLYEA--NARHTRLEIRHFDLLPEKGWEVDLDGLEAL---A 179
           +  +    G  +LLP   +  Y+   N R    EI  + +  E G   D D L+     A
Sbjct: 85  VADLFVDQGDTVLLPDHNWGNYKLTFNTRR-GAEIVTYPIFDEDG-GFDTDALKEALQAA 142

Query: 180 DENTVAMVIVN-PGNPCGNVFTYQQLQKIAEKARKLG-----IMVISDEVY 224
                 +VI+N P NP G   T ++   I E  ++L      ++ + D+ Y
Sbjct: 143 YNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAY 193

Length = 388

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 47.2 bits (113), Expect = 7e-06
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)

Query: 107 LSPDDVYLTAGCKQAIQVILTVLARPGA-NILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
           + P+ V ++ G  + I++++     PG   IL   P + +Y  +A    +EIR    L  
Sbjct: 72  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL-- 129

Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
             W++DL  +    D     + + +P NP GN+   Q L+ + E  R   I+V  DE Y
Sbjct: 130 DNWQLDLPAIADNLD-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVA-DEAY 186

Length = 351

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 47.6 bits (114), Expect = 7e-06
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 27/122 (22%)

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFD-LLPEKGWEV-------DL 172
           AI   L  L + G ++LLP     LY      T    R F+ +L + G EV       D 
Sbjct: 90  AISTALLALLKAGDHVLLPDD---LYGG----TY---RLFEKILQKFGVEVTFVDPGDDE 139

Query: 173 DGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST 232
               A+ + NT  + +  P NP   V     +  IA  A+  G +V+ D      TF +T
Sbjct: 140 ALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDN-----TF-AT 190

Query: 233 PY 234
           P 
Sbjct: 191 PV 192

Length = 396

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 47.3 bits (113), Expect = 1e-05
 Identities = 53/202 (26%), Positives = 78/202 (38%), Gaps = 51/202 (25%)

Query: 95  IADYLNSELPCKLSPD---DVYLTAGCKQAIQVILTVLA-----RPGANILLPKPGFPLY 146
           +  YL  E+     P    D++   G   A+  I   L      + G  I L  P F  Y
Sbjct: 138 VHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPY 197

Query: 147 EANARHTRLEIRH-----FDLLPEKGWEVDLDG----------LEALADENTVAMVIVNP 191
                   LEI       F+++  K  E+  DG          LE L D +  A+ +VNP
Sbjct: 198 --------LEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNP 249

Query: 192 GNPCGNVF---TYQQLQKIAEKARKLGIMVISDEVY----DHLT--FGSTPYVRMGVFGS 242
            NP        + +++  I    R   +M+++D+VY    D     F   PY  +GV+  
Sbjct: 250 SNPPSVAMSDESIEKIVDIVANDRP-DLMILTDDVYGTFVDDFRSLFAELPYNTIGVY-- 306

Query: 243 TVPVITLGSMSKRWIVPGWRLG 264
                   S SK +   GWRLG
Sbjct: 307 --------SFSKYFGATGWRLG 320

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 17/141 (12%)

Query: 135 NILLPKPGFPLYEANA--RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192
           NI++ +P F  Y+  A     R+    F+L+     E+       L + N   + IV+P 
Sbjct: 81  NIIIVEPNFNEYKGYAFTHGIRISALPFNLI-NNNPEI-------LNNYNFDLIFIVSPD 132

Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMG-VFGSTVPVITLG 250
           NP GN+ +   L  I+E  RK G ++  DE + D +   +   V +   +G+      +G
Sbjct: 133 NPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNV----IIG 188

Query: 251 -SMSKRWIVPGWRLGWLVTSD 270
            S++K   +P  R+G++ T D
Sbjct: 189 RSLTKILGIPSLRIGYIATDD 209

Length = 332

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 44.9 bits (107), Expect = 4e-05
 Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 27/232 (11%)

Query: 42  DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCY-SPSVGILPARRAIADYLN 100
           DP  II LG    S       +P A +A+   +       Y  P    L  R A++ Y  
Sbjct: 32  DPESIIKLG----SNENPLGPSPKAVEAIEKELSKIHR--YPEPDAPEL--REALSKYTG 83

Query: 101 SELPCKLSPDDVYLTA-GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH 159
                 +  +++ +   G  + I  ++     PG  +++P P F  YE +A+    +  +
Sbjct: 84  ------VPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVY 137

Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
                E+ + +D+D +     E T  + +  P NP GN+   + ++KI E    L   V 
Sbjct: 138 --AKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDAL---VF 192

Query: 220 SDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
            DE Y  + F    Y      + +   +I   + SK + + G R+G+    +
Sbjct: 193 VDEAY--VEFAEYDYTPLALEYDN---LIIGRTFSKVFGLAGLRIGYGFVPE 239

Length = 361

>gnl|CDD|234769 PRK00451, PRK00451, glycine dehydrogenase subunit 1; Validated

 Score = 45.1 bits (108), Expect = 4e-05
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 13/89 (14%)

Query: 136 ILLPKPGFPLY----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191
           +L+     P Y    +   +   +E+             DL+ LEA  D++T A+V+  P
Sbjct: 157 VLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGV---TDLEALEAAVDDDTAAVVVQYP 213

Query: 192 GNPCGNVF-TYQQLQKIAEKARKLGIMVI 219
                N F   + L++IAE A   G + I
Sbjct: 214 -----NFFGVIEDLEEIAEIAHAGGALFI 237

Length = 447

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
           KL  + + +TAG  +A+  ++ +LA     +++P+  +  YE  AR     I      PE
Sbjct: 51  KLFGEPIVITAGITEALY-LIGILALRDRKVIIPRHTYGEYERVARFFAARIIKGPNDPE 109

Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY- 224
           K        LE L + N+V +   NP NP G  + +++L+ + +       ++I DE + 
Sbjct: 110 K--------LEELVERNSV-VFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFI 160

Query: 225 DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265
           D +    +P            +I L + +K + +PG R+G+
Sbjct: 161 DFVKKPESP--------EGENIIKLRTFTKSYGLPGIRVGY 193

Length = 311

>gnl|CDD|215829 pfam00266, Aminotran_5, Aminotransferase class-V

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 21/140 (15%)

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR---PGANILLPKPG----- 142
           AR  +A+++N+      S +++  T+G  +AI ++   L R   PG  IL+ +       
Sbjct: 48  AREKVAEFINAP-----SDEEIIFTSGTTEAINLVAISLGRSLKPGDEILVTEMEHHANL 102

Query: 143 FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF-TY 201
            P  E  A+ T   +R   + P     +DLD LE L    T  +V +   +   NV  T 
Sbjct: 103 VPWQEL-AKRTGATVRVIPVDPN--GLLDLDALEKLLTPRT-KLVAITHVS---NVTGTV 155

Query: 202 QQLQKIAEKARKLGIMVISD 221
             +++I + A + G +V+ D
Sbjct: 156 NPVEEIGKLAHEYGALVVVD 175

This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 370

>gnl|CDD|235053 PRK02610, PRK02610, histidinol-phosphate aminotransferase; Provisional

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 28/157 (17%)

Query: 84  PSVGILPARRAIADYLN--SELPCKLSPDDVYLTAGCKQAIQVIL--TVLARPGANILLP 139
           P  G    ++AIA+Y+N  +    +++P ++ +  G  + I+ +L  T L   G+ IL+ 
Sbjct: 64  PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGS-ILVA 122

Query: 140 KPGFPLYEANARHTRLEI------RHFDLLPEKGWEVDLDGLEALADENTVAMV----IV 189
           +P F +Y   A+   L I      R       + +E+DL   ++  ++     V    +V
Sbjct: 123 EPTFSMYGILAQ--TLGIPVVRVGRD-----PETFEIDLAAAQSAIEQTQNPPVRVVFVV 175

Query: 190 NPGNPCGNVFTYQQLQKIAEKARKL--GIMVISDEVY 224
           +P +P GN  T  +L    E  R L   I+V+ DE Y
Sbjct: 176 HPNSPTGNPLTAAEL----EWLRSLPEDILVVIDEAY 208

Length = 374

>gnl|CDD|216267 pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 20/118 (16%)

Query: 121 AIQVILTVLARPGANILLPK----PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176
           AI   L  L + G +++         + L+E       +E+   D         DLD LE
Sbjct: 79  AIFAALLALLKAGDHVVATDDLYGGTYRLFEKVLPRFGIEVTFVDPS-------DLDALE 131

Query: 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY 234
           A    NT A+ +  P NP   V     ++ IA+ A+K G +V+ D      TF S PY
Sbjct: 132 AAIKPNTKAVFLETPTNPLLKV---VDIEAIAKIAKKHGALVVVDN-----TFAS-PY 180

This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. Length = 382

>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 46/234 (19%)

Query: 64  PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG----CK 119
           P    A+  A   A  + Y P +G +  R A+A++L       + P+ V +  G    C+
Sbjct: 38  PSVRAAIARAA--AGVNRY-PDMGAVELRAALAEHLG------VPPEHVAVGCGSVALCQ 88

Query: 120 QAIQVILTVLARPGANILLPKPGFPLYE-----ANARHTRLEIRHFDLLPEKGWEVDLDG 174
           Q +Q      A PG  ++     F  Y      A A   ++      L P+     DLD 
Sbjct: 89  QLVQA----TAGPGDEVIFAWRSFEAYPILVQVAGATPVQVP-----LTPDHT--HDLDA 137

Query: 175 LEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY 234
           + A   + T  + + NP NP G V T  +L +  +      ++V+ DE Y         Y
Sbjct: 138 MAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPA-DVLVVLDEAYVE-------Y 189

Query: 235 VR-------MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           VR       + +      V+ L + SK + + G R+G+ V      ++  LR V
Sbjct: 190 VRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPE--VIAALRKV 241

Length = 352

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 41.4 bits (98), Expect = 6e-04
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 34/210 (16%)

Query: 34  IKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--------EFDCYSPS 85
           +    + N    II LG GD         T     AV++A+  A         F  Y P 
Sbjct: 24  VNAFREANPEAKIIRLGIGD--------VTQPLPPAVIEAMHKAVDEMGTAETFRGYGPE 75

Query: 86  VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL 145
            G    R  IA+       C +S D+++++ G K     IL +   P   I +  P +P+
Sbjct: 76  QGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNILDIFG-PDNTIAVTDPVYPV 134

Query: 146 Y-----------EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194
           Y           EAN       I +     E  +      +  L +E    + +  P NP
Sbjct: 135 YVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNF------VPELPEEKVDIIYLCFPNNP 188

Query: 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
            G V T +QL+   + A++ G +++ D  Y
Sbjct: 189 TGTVLTKEQLKAWVDYAKENGSLILFDAAY 218

Length = 409

>gnl|CDD|99737 cd00613, GDC-P, Glycine cleavage system P-protein, alpha- and beta-subunits

 Score = 41.4 bits (98), Expect = 6e-04
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 125 ILTVLARPGAN-ILLPKPGFPLYEANARHTRLEIRHFDLLP---EKGWEVDLDGLEALAD 180
           +  + A    N +L+P    P   A AR TR E    +++    ++G  VDL+ L+    
Sbjct: 99  LAAIRAYHKRNKVLVPDSAHPTNPAVAR-TRGEPLGIEVVEVPSDEGGTVDLEALKEEVS 157

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221
           E   A+++  P N  G       +++IA+ A   G +V  D
Sbjct: 158 EEVAALMVQYP-NTLGVF--EDLIKEIADIAHSAGALVYVD 195

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <=> S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life. Length = 398

>gnl|CDD|225428 COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 37/120 (30%), Positives = 48/120 (40%), Gaps = 24/120 (20%)

Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV------DLDG 174
           AI   +  LA  G NI+       LY     +          L   G EV      D + 
Sbjct: 89  AITYAILNLAGAGDNIV---SSSKLY--GGTYNLFSH----TLKRLGIEVRFVDPDDPEN 139

Query: 175 LEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY 234
            EA  DENT A+     GNP  +V     ++ IAE A + G+ +I D      TF  TPY
Sbjct: 140 FEAAIDENTKAVFAETIGNPGLDVL---DIEAIAEIAHRHGVPLIVDN-----TFA-TPY 190

Length = 426

>gnl|CDD|180392 PRK06084, PRK06084, O-acetylhomoserine aminocarboxypropyltransferase; Validated

 Score = 41.0 bits (96), Expect = 0.001
 Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 24/129 (18%)

Query: 163 LPEKGWEV------DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           LP  G E       D+  LEAL DE T A+   + GNP GN+     +Q +A+ A + G+
Sbjct: 118 LPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNII---DIQALADAAHRHGV 174

Query: 217 MVISDEV---------YDH----LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263
            +I D           ++H    +    T Y  +G  G+++  I + S    W     R 
Sbjct: 175 PLIVDNTVATPVLCRPFEHGADIVVHSLTKY--IGGHGTSIGGIVVDSGKFPWAEHKERF 232

Query: 264 GWLVTSDPS 272
             L T DPS
Sbjct: 233 ALLNTPDPS 241

Length = 425

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)

Query: 121 AIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG-LEA 177
           A++V    LAR  P A + +  P +P ++A      LE+  +     +   +D DG L  
Sbjct: 106 ALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLAD 165

Query: 178 L--ADENTVAMVIVNP--GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
           L  A E +V  V+++    NP G   T +Q Q++A+  ++ G++   D  Y
Sbjct: 166 LKTAPEGSV--VLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY 214

Length = 396

>gnl|CDD|99746 cd06453, SufS_like, Cysteine desulfurase (SufS)-like

 Score = 40.1 bits (95), Expect = 0.002
 Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 33/146 (22%)

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAI---------------QVILTVLARPGAN 135
           AR  +A ++N+      SPD++  T    +AI               +++ +V+    +N
Sbjct: 48  AREKVARFINAP-----SPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEH-HSN 101

Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195
           I+      P  +  A  T  +++   +  + G ++DL+ LE L  E T  + + +  N  
Sbjct: 102 IV------PWQQL-AERTGAKLKVVPVDDD-G-QLDLEALEKLLTERTKLVAVTHVSNVL 152

Query: 196 GNVFTYQQLQKIAEKARKLGIMVISD 221
           G +     +++I E A + G+ V+ D
Sbjct: 153 GTI---NPVKEIGEIAHEAGVPVLVD 175

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine. Length = 373

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 15/138 (10%)

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
               +A  L          D          A +  L  L  PG  +++   G        
Sbjct: 5   LEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGH--GSRYW 56

Query: 151 RHTRL---EIRHFDLLPEKGWEVDLDGLE-ALADENTVAMVIVNPGNPCGNVFTYQQLQK 206
               L   +     +       +D+  LE   A  N   +VI       G +   ++++K
Sbjct: 57  VAAELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRK 116

Query: 207 IAEKARKLGIMVISDEVY 224
           IA++    GI+++ D   
Sbjct: 117 IAKEY---GILLLVDAAS 131

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|235115 PRK03317, PRK03317, histidinol-phosphate aminotransferase; Provisional

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 45/209 (21%)

Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-------P 144
           R  +A YL ++    L+ ++V+   G  + +Q +L     PG   L    GF       P
Sbjct: 71  RADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTAL----GFVPSYSMHP 126

Query: 145 LYEANARHTR-LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV-NPGNPCGNVFTYQ 202
           +  A   HT  +E           + +D+D   A   E+   +V + +P NP G      
Sbjct: 127 II-ARGTHTEWVEGPR-----AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLD 180

Query: 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI----------TLGSM 252
            ++ I + A     +V+ DE Y       TP        S + ++          T   M
Sbjct: 181 DVEAILDAAPG---IVVVDEAYAEFRRSGTP--------SALTLLPEYPRLVVSRT---M 226

Query: 253 SKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           SK +   G RLG+L  + P  ++  LR+V
Sbjct: 227 SKAFAFAGGRLGYLA-AAP-AVVDALRLV 253

Length = 368

>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase; Provisional

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 163 LPEKGWEV--DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ--LQKIAEKARKLGIMV 218
            PE G E+  +L+ L  L D +T+A VIV P      V    +  LQ++ E   K GI++
Sbjct: 193 QPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILL 252

Query: 219 ISDEV 223
           I DEV
Sbjct: 253 IFDEV 257

Length = 442

>gnl|CDD|130393 TIGR01326, OAH_OAS_sulfhy, OAH/OAS sulfhydrylase

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)

Query: 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG 230
           D +  E   DENT A+     GNP  NV     ++ IAE A   G+ +I D      TF 
Sbjct: 131 DPEEFEKAIDENTKAVFAETIGNPAINVP---DIEAIAEVAHAHGVPLIVDN-----TFA 182

Query: 231 STPY 234
            TPY
Sbjct: 183 -TPY 185

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities [Amino acid biosynthesis, Aspartate family, Amino acid biosynthesis, Serine family]. Length = 418

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 26/180 (14%)

Query: 90  PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN 149
            AR A+A           +PD+V L AG  +   ++  +  R  A +    P F   EA 
Sbjct: 62  RARAAVAARHG------RTPDEVLLLAGAAEGFALLARLRPRRAAVV---HPSFTEPEAA 112

Query: 150 ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE 209
            R   + +    L P       LD      D + V  VI NP NP   +   +QL  +  
Sbjct: 113 LRAAGIPVHRVVLDPP----FRLDPAAVPDDADLV--VIGNPTNPTSVLHPAEQLLALRR 166

Query: 210 KARKLGIMVISDEVYDHLTFGST-PYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLV 267
             R   I+V+ DE      F    P     + G  +P V+ L S++K W + G R+G+ +
Sbjct: 167 PGR---ILVV-DE-----AFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYAL 217

Length = 349

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	421
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02187	462	rooty/superroot1	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PLN02656	409	tyrosine transaminase	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PRK06855	433	aminotransferase; Validated	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PRK09148	405	aminotransferase; Validated	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PLN02231	534	alanine transaminase	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK07324	373	transaminase; Validated	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK07777	387	aminotransferase; Validated	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK08175	395	aminotransferase; Validated	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PLN02368	407	alanine transaminase	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PLN02397	423	aspartate transaminase	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	100.0
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	100.0
PRK10874	401	cysteine sulfinate desulfinase; Provisional	100.0
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	100.0
PLN02822	481	serine palmitoyltransferase	100.0
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	100.0
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	100.0
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	100.0
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	100.0
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	100.0
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	100.0
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	100.0
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	100.0
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	100.0
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	100.0
PRK02627	396	acetylornithine aminotransferase; Provisional	100.0
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	100.0
PLN02483	489	serine palmitoyltransferase	100.0
PRK13392	410	5-aminolevulinate synthase; Provisional	100.0
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	100.0
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	100.0
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	100.0
PRK01278	389	argD acetylornithine transaminase protein; Provisi	100.0
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	100.0
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.98
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.98
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.98
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.98
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.98
PRK02948	381	cysteine desulfurase; Provisional	99.98
PRK07179	407	hypothetical protein; Provisional	99.98
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.97
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.97
PRK09064	407	5-aminolevulinate synthase; Validated	99.97
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.97
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.97
PLN02409	401	serine--glyoxylate aminotransaminase	99.97
PLN02721	353	threonine aldolase	99.97
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.97
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
PRK10534	333	L-threonine aldolase; Provisional	99.97
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.97
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.97
PRK13393	406	5-aminolevulinate synthase; Provisional	99.97
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.97
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.97
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.97
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.97
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.96
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.96
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.96
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.96
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.96
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.96
PRK14012	404	cysteine desulfurase; Provisional	99.96
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.96
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.96
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.96
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.96
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.96
PLN02651	364	cysteine desulfurase	99.96
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.96
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.96
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.96
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.96
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.95
PLN00144	382	acetylornithine transaminase	99.95
PRK07049	427	methionine gamma-lyase; Validated	99.95
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.95
PRK04260	375	acetylornithine aminotransferase; Provisional	99.95
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.95
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.95
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.95
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.95
PRK07505	402	hypothetical protein; Provisional	99.95
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.95
PLN02955	476	8-amino-7-oxononanoate synthase	99.95
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.95
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.95
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.95
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.94
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.94
PLN02242	418	methionine gamma-lyase	99.94
PRK06234	400	methionine gamma-lyase; Provisional	99.94
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.94
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.94
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.94
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.94
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.94
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.94
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.94
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.94
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.94
PRK06767	386	methionine gamma-lyase; Provisional	99.93
PRK08776	405	cystathionine gamma-synthase; Provisional	99.93
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.93
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.93
PRK06460	376	hypothetical protein; Provisional	99.93
PLN02624	474	ornithine-delta-aminotransferase	99.93
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.93
PRK08045	386	cystathionine gamma-synthase; Provisional	99.93
PRK08249	398	cystathionine gamma-synthase; Provisional	99.93
PRK08861	388	cystathionine gamma-synthase; Provisional	99.93
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.93
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.93
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.93
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.93
PRK09028	394	cystathionine beta-lyase; Provisional	99.93
PRK07811	388	cystathionine gamma-synthase; Provisional	99.93
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.93
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.93
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.93
PRK07503	403	methionine gamma-lyase; Provisional	99.93
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.93
PRK08574	385	cystathionine gamma-synthase; Provisional	99.93
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.92
PRK07582	366	cystathionine gamma-lyase; Validated	99.92
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.92
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.92
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.92
PRK05968	389	hypothetical protein; Provisional	99.92
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.92
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.92
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.92
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.92
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.92
PRK07050	394	cystathionine beta-lyase; Provisional	99.92
PLN02724	805	Molybdenum cofactor sulfurase	99.91
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.91
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.91
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.91
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.91
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.91
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.91
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.91
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.91
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.91
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.91
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.9
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.9
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK03080	378	phosphoserine aminotransferase; Provisional	99.9
PRK08064	390	cystathionine beta-lyase; Provisional	99.9
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.9
PRK05939	397	hypothetical protein; Provisional	99.9
PRK06541	460	hypothetical protein; Provisional	99.9
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.9
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.9
PLN02509	464	cystathionine beta-lyase	99.89
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.89
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.89
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.89
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.89
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.89
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.89
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.89
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.89
PRK05967	395	cystathionine beta-lyase; Provisional	99.89
PRK07678	451	aminotransferase; Validated	99.89
PRK07671	377	cystathionine beta-lyase; Provisional	99.89
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.89
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.89
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.88
PRK07482	461	hypothetical protein; Provisional	99.88
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.88
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.88
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.88
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.88
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.87
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.87
PRK05965	459	hypothetical protein; Provisional	99.87
PRK02769	380	histidine decarboxylase; Provisional	99.87
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.87
PRK06105	460	aminotransferase; Provisional	99.87
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.87
PRK06062	451	hypothetical protein; Provisional	99.87
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.87
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.87
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.87
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.87
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.86
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.86
PRK08114	395	cystathionine beta-lyase; Provisional	99.86
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.86
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.86
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.86
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.86
PRK07046	453	aminotransferase; Validated	99.86
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.86
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.86
PRK07483	443	hypothetical protein; Provisional	99.86
PRK12403	460	putative aminotransferase; Provisional	99.86
PLN02880	490	tyrosine decarboxylase	99.85
PLN02590	539	probable tyrosine decarboxylase	99.85
PRK07481	449	hypothetical protein; Provisional	99.85
PRK06917	447	hypothetical protein; Provisional	99.85
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.85
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.85
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.85
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.85
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.85
PRK07036	466	hypothetical protein; Provisional	99.85
PRK06148	1013	hypothetical protein; Provisional	99.85
PRK06149	972	hypothetical protein; Provisional	99.85
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.85
PRK07480	456	putative aminotransferase; Validated	99.85
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.84
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.84
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.84
PLN03032	374	serine decarboxylase; Provisional	99.84
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.84
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.84
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.84
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.84
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.83
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.83
PLN02271	586	serine hydroxymethyltransferase	99.83
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.83
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.82
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.82
PRK06434	384	cystathionine gamma-lyase; Validated	99.82
PRK08297	443	L-lysine aminotransferase; Provisional	99.82
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.82
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.81
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.8
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.8
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.8
PRK13237	460	tyrosine phenol-lyase; Provisional	99.8
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.8
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.79
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.79
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.79
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.79
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.77
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.77
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.77
PLN02452	365	phosphoserine transaminase	99.77
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.77
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.76
PRK15029	755	arginine decarboxylase; Provisional	99.76
PRK05367	954	glycine dehydrogenase; Provisional	99.76
PLN02263	470	serine decarboxylase	99.76
PRK04311	464	selenocysteine synthase; Provisional	99.75
PRK12566	954	glycine dehydrogenase; Provisional	99.73
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.73
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.72
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.7
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.68
PRK12462	364	phosphoserine aminotransferase; Provisional	99.68
PRK13578	720	ornithine decarboxylase; Provisional	99.67
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.66
PRK15400	714	lysine decarboxylase CadA; Provisional	99.66
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.65
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.65
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.63
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.62
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.62
PRK05367	954	glycine dehydrogenase; Provisional	99.61
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.6
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.58
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	99.55
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	99.53
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.52
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.51
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.5
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.32
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.26
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.23
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.17
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	99.15
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	99.11
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.06
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	99.03
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.02
KOG0629	510	consensus Glutamate decarboxylase and related prot	99.0
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.89
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	98.84
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.79
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.77
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	98.74
COG4100	416	Cystathionine beta-lyase family protein involved i	98.64
PRK12566	954	glycine dehydrogenase; Provisional	98.55
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	98.11
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	97.59
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	97.57
PLN02672	1082	methionine S-methyltransferase	96.64
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	90.45
COG2102	223	Predicted ATPases of PP-loop superfamily [General	88.04
KOG1465	353	consensus Translation initiation factor 2B, beta s	80.75
KOG1467	556	consensus Translation initiation factor 2B, delta	80.1

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.2e-64  Score=437.46  Aligned_cols=409  Identities=58%  Similarity=1.084  Sum_probs=388.8

Q ss_pred             ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631           10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL   89 (421)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~   89 (421)
                      |.|..+ +..++.+.+++|.+...+..-.+...+.++|.+++|+|+.+++++..+.+.+|+.+.+..+..++|+|+.|+.
T Consensus        28 W~f~gs-~~a~ka~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~  106 (447)
T KOG0259|consen   28 WRFKGS-DAAKKAASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGIL  106 (447)
T ss_pred             eeeccc-hhhhhhccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccH
Confidence            999999 6666677899999999888888777677999999999999999999999999999999999899999999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE  169 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  169 (421)
                      ..|+++|+|+++...-..++++|++|+|.++|++.++.+|.+||-.|+++.|+|+-|...+...|.+++++.+.++.+|.
T Consensus       107 ~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~we  186 (447)
T KOG0259|consen  107 PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWE  186 (447)
T ss_pred             HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccce
Confidence            99999999999888878899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      +|++.++.+++++|.++++.||+||+|.+++.+-|++|++.|+++++++|.||+|..+.|++.++.++..+....+++.+
T Consensus       187 IDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitl  266 (447)
T KOG0259|consen  187 IDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITL  266 (447)
T ss_pred             echHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988899999


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY  329 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  329 (421)
                      +|+||.|..||||+||++..|+.+++.+..+.+.+++.......|+++.|.|+...|+...+++++.....++.+.+..+
T Consensus       267 ggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y  346 (447)
T KOG0259|consen  267 GGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCY  346 (447)
T ss_pred             cccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHH
Confidence            99999999999999999999999999887788899998887789999999999999998889999999999999999999


Q ss_pred             HHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631          330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR  409 (421)
Q Consensus       330 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~  409 (421)
                      +.|+++|++.|...|++.+|+|+.++..-++.+.++.+|+.+|.+|+.+.+.||..|+.++|+|++++.+.+.+++++++
T Consensus       347 ~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~R  426 (447)
T KOG0259|consen  347 SRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSR  426 (447)
T ss_pred             HHHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHH
Confidence            99999999998889999999999998877777788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhh
Q 014631          410 IKAFCQRHAK  419 (421)
Q Consensus       410 l~~~~~~~~~  419 (421)
                      |+++..++.+
T Consensus       427 ik~Fc~RH~~  436 (447)
T KOG0259|consen  427 IKEFCDRHSK  436 (447)
T ss_pred             HHHHHHhhhh
Confidence            9999988764

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=2.3e-60  Score=455.28  Aligned_cols=415  Identities=67%  Similarity=1.210  Sum_probs=356.0

Q ss_pred             ccccccCCCchhHHhhhhhhhHHHHHHHHHHhccccC-CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC
Q 014631            6 VKKKWGFQVKQEHITATATLTVRSALTIIKQNLKEND-PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP   84 (421)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~   84 (421)
                      ....|.|..++..+.+.....++..+......++... +.++|+|++|+|+..+.+++++.+.+++.+.+.....+.|++
T Consensus        13 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~   92 (430)
T PLN00145         13 ATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYST   92 (430)
T ss_pred             ccccccccCchhhHHHhcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCC
Confidence            3456999999544565566778888777766665553 789999999999988888999999999999988765568999


Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP  164 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~  164 (421)
                      ..|++++|+++++++++.+|.++++++|++|+|+++++.+++..+.++||+|++++|+|+.|...+...|++++.+++.+
T Consensus        93 ~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~  172 (430)
T PLN00145         93 CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLP  172 (430)
T ss_pred             CccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCc
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999999999877


Q ss_pred             CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       165 ~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                      +++|.+|+++++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.|++..+.++..++..+
T Consensus       173 ~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~  252 (430)
T PLN00145        173 ERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVA  252 (430)
T ss_pred             ccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccC
Confidence            77899999999999988999999999999999999999999999999999999999999999988776555665566667


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT  324 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (421)
                      ++++++||||.|++||+|+||++++++..+....++.+.++.......+++.+.|.++..+|+...+.++++.++.++++
T Consensus       253 ~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~  332 (430)
T PLN00145        253 PVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKET  332 (430)
T ss_pred             cEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            89999999999999999999999866544432223445555555444467889999999999754468899999999999


Q ss_pred             HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHH
Q 014631          325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALE  404 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~  404 (421)
                      ++.+.+.|++++++.++..|++++|+|++++....++..++.+++.++++++||.+.||..|+..+++||+++.+.++++
T Consensus       333 ~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~  412 (430)
T PLN00145        333 ADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLE  412 (430)
T ss_pred             HHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHH
Confidence            99999999998888754579999999999875322222256788888999999999999999988999999999899999


Q ss_pred             HHHHHHHHHHHHhhhc
Q 014631          405 EGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~~  420 (421)
                      +++++|.+++.++.++
T Consensus       413 ~al~rl~~~~~~~~~~  428 (430)
T PLN00145        413 DGLERLKSFCLRHAKL  428 (430)
T ss_pred             HHHHHHHHHHHHhccc
Confidence            9999999999988765

>PLN02187 rooty/superroot1

Probab=100.00  E-value=3e-59  Score=450.19  Aligned_cols=409  Identities=51%  Similarity=1.015  Sum_probs=347.4

Q ss_pred             ccccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 014631            8 KKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVG   87 (421)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g   87 (421)
                      ..|.|..+ .........+||.+...+.+.++++.++++|+|++|+|+..+.+.+++.+.+++.+.+..+....|++..|
T Consensus        31 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G  109 (462)
T PLN02187         31 SVWRFGGS-DKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAG  109 (462)
T ss_pred             cccccCcc-hhhhhhhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            44999998 66777777899999888876676677899999999999987777888999999999888765568999999


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG  167 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  167 (421)
                      ++++|+++|+|+++.++.++++++|++|+|+++++..++.++++|||+|++++|+|+.|...+...|++++.+++.++++
T Consensus       110 ~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~  189 (462)
T PLN02187        110 ILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKE  189 (462)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccC
Confidence            99999999999999888889999999999999999999999999999999999999999999999999999999876678


Q ss_pred             ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631          168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI  247 (421)
Q Consensus       168 ~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  247 (421)
                      |++|+++++++++++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++..+.++..++...+++
T Consensus       190 ~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi  269 (462)
T PLN02187        190 WEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVL  269 (462)
T ss_pred             CccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEE
Confidence            99999999999888899999999999999999999999999999999999999999999988776555555555445799


Q ss_pred             EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT  324 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (421)
                      +++||||.|++||+|+||++++++....   ++++.+....   ....+++.+.|.++..+|+...+.++++.++.++++
T Consensus       270 ~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~  346 (462)
T PLN02187        270 TLAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHN  346 (462)
T ss_pred             EEecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence            9999999999999999999986543221   1223443333   223356889999999999754468899999999999


Q ss_pred             HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHH
Q 014631          325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALE  404 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~  404 (421)
                      ++.+.+.|++++++.++..|++|+|+|++++.....+..++.+++.++++++||.+.||..|+..+++||+++.++++++
T Consensus       347 r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~  426 (462)
T PLN02187        347 VDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLE  426 (462)
T ss_pred             HHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHH
Confidence            99999999988655434478899999998864211112246678888889999999999999888999999998899999


Q ss_pred             HHHHHHHHHHHHhhhc
Q 014631          405 EGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~~  420 (421)
                      +++++|.++++++.++
T Consensus       427 ~al~rL~~~l~~~~~~  442 (462)
T PLN02187        427 DALERLKGFCTRHAKK  442 (462)
T ss_pred             HHHHHHHHHHHHhhhc
Confidence            9999999999887654

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-59  Score=441.41  Aligned_cols=357  Identities=29%  Similarity=0.523  Sum_probs=319.5

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEcCCHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD-VYLTAGCKQAI  122 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~-i~~~~g~~~al  122 (421)
                      .++|+|++|+|+    ++.|+.+.+++.+.+..+.. .|.+..|+++||++|++++.+++|...++++ |++|+|+++|+
T Consensus        28 ~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al  102 (393)
T COG0436          28 EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL  102 (393)
T ss_pred             CCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence            689999999987    68999999999999988643 6779999999999999999999998888877 99999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      .+++.++++|||+|++++|.|..|.......|++++.+++..+ ++|.+|+|++++.+.+++|++++++||||||.++++
T Consensus       103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~  182 (393)
T COG0436         103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSK  182 (393)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCH
Confidence            9999999999999999999999999999999999999998655 489999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      +++++|+++|++||++||+||+|..+.|++..+.++..+.. .+++|.+.||||.|+++|||+||+++++       +++
T Consensus       183 ~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~-------~~l  255 (393)
T COG0436         183 EELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP-------EEL  255 (393)
T ss_pred             HHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh-------HHH
Confidence            99999999999999999999999999999864555555544 5789999999999999999999999963       357


Q ss_pred             HHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631          281 VDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL  358 (421)
Q Consensus       281 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  358 (421)
                      .+.+.... ....+++.+.|.++.++|+... ....+..++.++++++.+.+.|.+++|+.+...|++++|+|+.++.. 
T Consensus       256 ~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~-  334 (393)
T COG0436         256 IAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL-  334 (393)
T ss_pred             HHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-
Confidence            77776554 3456899999999999998643 35778888999999999999999998898664489999999999854 


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                          .++.+|+.+|+++.||.+.||+.|+..   +++|+|++.+.+++++++++|.++++..
T Consensus       335 ----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~  392 (393)
T COG0436         335 ----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY  392 (393)
T ss_pred             ----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence                278999999999999999999999975   7999999988899999999999998764

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=4.4e-57  Score=431.69  Aligned_cols=396  Identities=65%  Similarity=1.149  Sum_probs=335.1

Q ss_pred             hHHHHHHHHHHhc-cccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 014631           26 TVRSALTIIKQNL-KENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELP  104 (421)
Q Consensus        26 ~~~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~  104 (421)
                      .|+..+..+++.+ .+..+.++|+|++|+|...+.+++++.+.+++.+.+.......|++..|.+++|++++++++..+|
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g   91 (409)
T PLN02656         12 TIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLP   91 (409)
T ss_pred             hhhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence            3667666666555 445789999999999986666788999999999988876566899999999999999999999888


Q ss_pred             CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCce
Q 014631          105 CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV  184 (421)
Q Consensus       105 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~  184 (421)
                      ..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|++++.+++.+++++.+|++++++.++++++
T Consensus        92 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~  171 (409)
T PLN02656         92 YKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTV  171 (409)
T ss_pred             CCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCce
Confidence            88999999999999999999999999999999999999999988888999999999987666788999999998888899


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631          185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG  264 (421)
Q Consensus       185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  264 (421)
                      ++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..++..+++|+++||||.|+++|+|+|
T Consensus       172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG  251 (409)
T PLN02656        172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLG  251 (409)
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEE
Confidence            99999999999999999999999999999999999999999998877554555555556689999999999999999999


Q ss_pred             EEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          265 WLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      |++++++..+...+++++.+........+++.+.|.++..+|+...+.++++.+++++++++.+.+.|++++++..+..|
T Consensus       252 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p  331 (409)
T PLN02656        252 WFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKP  331 (409)
T ss_pred             EEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCC
Confidence            99996543322224577777665443446788999999999975446788999999999999999999987655423478


Q ss_pred             CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhhcC
Q 014631          345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ  421 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~~  421 (421)
                      ++|+|+|++++.....+..++.+++.++++++||.+.||+.|+..+++||+++.+++++++++.+|++++.++..+|
T Consensus       332 ~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~~~  408 (409)
T PLN02656        332 EGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKTQ  408 (409)
T ss_pred             CeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcccc
Confidence            99999999986421111113556777788899999999999988899999999889999999999999998887654

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=2.4e-56  Score=426.32  Aligned_cols=394  Identities=66%  Similarity=1.160  Sum_probs=325.9

Q ss_pred             HHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC
Q 014631           27 VRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK  106 (421)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~  106 (421)
                      |+..+..+++.+....++++|+|+.|+|..+..+++|+.+.+++.+.++......|++..|.+++|+++++|+++.+|.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~   94 (409)
T PLN00143         15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ   94 (409)
T ss_pred             HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence            33334444444455568999999999987555578999999999999887655679999999999999999999988888


Q ss_pred             CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631          107 LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAM  186 (421)
Q Consensus       107 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i  186 (421)
                      +++++|++|+|+++++.+++++++++||.|++++|+|+.+...+...|.+++.+++.++++|.+|++++++++.++++.+
T Consensus        95 ~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~  174 (409)
T PLN00143         95 LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM  174 (409)
T ss_pred             CCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEE
Confidence            99999999999999999999999999999999999999999999999999999988666778899999999888888999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEE
Q 014631          187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL  266 (421)
Q Consensus       187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  266 (421)
                      ++++||||||.+++.+++++|+++|++||++||+||+|.++.+++....++..++..+++++++||||.|+++|+|+||+
T Consensus       175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~  254 (409)
T PLN00143        175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWL  254 (409)
T ss_pred             EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEE
Confidence            99999999999999999999999999999999999999999887654445555555568999999999999999999999


Q ss_pred             EeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          267 VTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                      +++++....+..++.+.+.........++.+.|.++..+|+.....++++.+++++++++.+.+.|.++++..+...|++
T Consensus       255 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~g  334 (409)
T PLN00143        255 VTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEG  334 (409)
T ss_pred             EeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCe
Confidence            98654322211123444444433223457789999999997544678899999999999999999998755442346889


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      |+|+|++++....++..++.+++.++++++||.+.||..|+..+++||+++.+.+++++++++|.++++++.++
T Consensus       335 g~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~  408 (409)
T PLN00143        335 AFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK  408 (409)
T ss_pred             eEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence            99999999742111112466787788889999999999998889999999988999999999999999887653

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=5.1e-54  Score=410.37  Aligned_cols=402  Identities=53%  Similarity=1.000  Sum_probs=337.3

Q ss_pred             ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631           10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL   89 (421)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~   89 (421)
                      |.|.-+ .|.++. .++|+++...+++..  ..+.++++|+.|.|...+.+++++.+.+++.+.+.......|++..|..
T Consensus         1 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~   76 (403)
T TIGR01265         1 WNFKGS-DHAKKT-VNPIRAIVDNLKVKP--NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGAL   76 (403)
T ss_pred             CCCchH-HHHHHH-HHHHHHHHHHHHHHH--hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCH
Confidence            566666 556655 588999888777653  2368999999999986667888999999999988765556898899999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE  169 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  169 (421)
                      ++|++++++++..++..+++++|++|+|+++++.+++.++.++||+|++++|+|..+...+...|.+++.++++++++++
T Consensus        77 ~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  156 (403)
T TIGR01265        77 AAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWE  156 (403)
T ss_pred             HHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCc
Confidence            99999999999877877889999999999999999999999999999999999999999999999999999886666788


Q ss_pred             CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      +|++++++.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+++.+++....++..++...++|++
T Consensus       157 ~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~  236 (403)
T TIGR01265       157 IDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSL  236 (403)
T ss_pred             cCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEE
Confidence            99999999888889999999999999999999999999999999999999999999998877555566666666679999


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY  329 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  329 (421)
                      +||||.|++||+|+||++++++..++. .++.+.+........+++.++|.++..++....+.++++.+++++++++.+.
T Consensus       237 ~S~SK~~~~pGlRiG~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  315 (403)
T TIGR01265       237 GGISKRWVVPGWRLGWIIIHDPHGIFR-DTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCY  315 (403)
T ss_pred             eecccccCCCcceEEEEEEeCchhhhH-HHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999865432221 1244545444433346788999999999975456788999999999999999


Q ss_pred             HHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631          330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR  409 (421)
Q Consensus       330 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~  409 (421)
                      +.|+.++++. +..|.+|+|+|++++.....+..++.+++..+++++||.+.||..|+..+++|+|++.+++++++++++
T Consensus       316 ~~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~  394 (403)
T TIGR01265       316 EELKDIPGLV-CPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSR  394 (403)
T ss_pred             HHHhcCCCce-ecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHH
Confidence            9999887876 457999999999997532111124677888878889999999999988899999999888999999999


Q ss_pred             HHHHHHHh
Q 014631          410 IKAFCQRH  417 (421)
Q Consensus       410 l~~~~~~~  417 (421)
                      |.++++++
T Consensus       395 l~~~~~~~  402 (403)
T TIGR01265       395 IKEFCERH  402 (403)
T ss_pred             HHHHHHhc
Confidence            99998654

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=5.4e-54  Score=410.43  Aligned_cols=400  Identities=37%  Similarity=0.760  Sum_probs=329.6

Q ss_pred             ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631           10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL   89 (421)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~   89 (421)
                      |.++.+ .|.+.. .++++.+....+.+.  +.+.++++|+.|.|.....+++++.+.+++.+.+.......|++..|..
T Consensus         1 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   76 (401)
T TIGR01264         1 WSVKPS-DHSKNT-VNPIRAIVDNMKVKP--NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGAL   76 (401)
T ss_pred             CCcChH-HHHhhh-hhHHHHHHHHHHhhh--hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCH
Confidence            677777 555554 355888777666433  3467899999999864344678899999999988765456799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE  169 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  169 (421)
                      ++|+++++++++. +..+++++|++|+|+++++.+++.+++++||+|++++|+|..+...++..|++++.++++.+++++
T Consensus        77 ~lr~aia~~~~~~-~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~  155 (401)
T TIGR01264        77 SAREAIASYYHNP-DGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWE  155 (401)
T ss_pred             HHHHHHHHHHhhc-CCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCC
Confidence            9999999999874 556889999999999999999999999999999999999999999999999999999887666788


Q ss_pred             CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      +|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++|++
T Consensus       156 ~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~  235 (401)
T TIGR01264       156 IDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSC  235 (401)
T ss_pred             CCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEE
Confidence            99999999888788999999999999999999999999999999999999999999998877555555556554468999


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY  329 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  329 (421)
                      +||||.|+++|+|+||++++++....  .++++.+........+++.+.|.++..+|....+.++++.++.++++++.+.
T Consensus       236 ~SfSK~~~~~GlRiG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~  313 (401)
T TIGR01264       236 GGLAKRWLVPGWRLGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCY  313 (401)
T ss_pred             ccCcccCCCccceEEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999987532211  2345555544332346788999999999875446888999999999999999


Q ss_pred             HHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631          330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR  409 (421)
Q Consensus       330 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~  409 (421)
                      +.|++++++. +..|.+|+|+|++++....++..++.+++..+++++||.+.||..|+..+++|++++.+++++++++++
T Consensus       314 ~~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~r  392 (401)
T TIGR01264       314 GALAAVPGLR-PVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSR  392 (401)
T ss_pred             HHHHhCCCCc-ccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHH
Confidence            9999987876 457999999999986421111224677888887789999999999987899999999889999999999


Q ss_pred             HHHHHHHh
Q 014631          410 IKAFCQRH  417 (421)
Q Consensus       410 l~~~~~~~  417 (421)
                      |.++++++
T Consensus       393 l~~~~~~~  400 (401)
T TIGR01264       393 IQEFCERH  400 (401)
T ss_pred             HHHHHhcc
Confidence            99998764

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=2.4e-53  Score=406.64  Aligned_cols=375  Identities=38%  Similarity=0.677  Sum_probs=316.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhC------CCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL------PCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~------~~~~~~~~i~~~  115 (421)
                      .+.++|+|+.|.|+..+.+.+++.+.+++.+.+.......|++..|.++||+++++|+++.+      |..+++++|++|
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it  110 (412)
T PTZ00433         31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC  110 (412)
T ss_pred             CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence            58899999999988554456789999999998876555689999999999999999998754      456889999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC  195 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt  195 (421)
                      +|+++++.+++.+++++||+|+++.|+|..+...++..|++++.++.++++++++|++++++.+.++++++++++|||||
T Consensus       111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPt  190 (412)
T PTZ00433        111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPC  190 (412)
T ss_pred             CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCC
Confidence            99999999999999999999999999999999999999999999998766678899999999888889999999999999


Q ss_pred             ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631          196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL  275 (421)
Q Consensus       196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  275 (421)
                      |.+++.+++++|+++|+++|++||+||+|.++.+++....++..++...++++++||||.|+++|+|+||++++++....
T Consensus       191 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~  270 (412)
T PTZ00433        191 GSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNG  270 (412)
T ss_pred             CcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccH
Confidence            99999999999999999999999999999999887654445555554446899999999999999999999984332111


Q ss_pred             hHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecC
Q 014631          276 QELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLN  355 (421)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~  355 (421)
                        +++++.+........+++.+.|.++..++....+.++++.++.++++++.+.+.|+++.++. +..|++|+|+|++++
T Consensus       271 --~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~f~~~~l~  347 (412)
T PTZ00433        271 --GDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPRGSMFLMSRLD  347 (412)
T ss_pred             --HHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCeeEEEEEEec
Confidence              34666666654433468889999999888754467889999999999999999999866777 557899999999987


Q ss_pred             cccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .....+..++.+++..+++++||.+.||..|+..+++|++++.+++++++++++|.++++++++
T Consensus       348 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~~  411 (412)
T PTZ00433        348 LEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHKK  411 (412)
T ss_pred             hhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence            4211111135678888877789999999999888999999998899999999999999987653

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=2.8e-53  Score=416.07  Aligned_cols=398  Identities=23%  Similarity=0.443  Sum_probs=321.0

Q ss_pred             ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631           10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL   89 (421)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~   89 (421)
                      |-+..+ ..+..+..+.++.+....++.  +..|.++|+|+.|+|..+ ++++|+.+.+++.+.+..  ...|++..|++
T Consensus       115 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~  188 (517)
T PRK13355        115 RTFKKS-HKLDNVLYDVRGPVVDEANRM--EAAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLF  188 (517)
T ss_pred             cCCChh-HHhhccCccHHHHHHHHHHHH--HHcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChH
Confidence            445555 566666666665565555432  335889999999998632 357788999999888764  35799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE  169 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  169 (421)
                      +||++|++|++.+.+.++++++|++|+|+++++.+++.+++++||+|++++|+|..|...+...|++++.++.+++++|.
T Consensus       189 ~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~  268 (517)
T PRK13355        189 SARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY  268 (517)
T ss_pred             HHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence            99999999998876666899999999999999999999999999999999999999999999999999999987777899


Q ss_pred             CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      +|++++++.+.++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++....++..+..+..++++
T Consensus       269 ~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~  348 (517)
T PRK13355        269 PDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTF  348 (517)
T ss_pred             CCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEE
Confidence            99999999998899999999999999999999999999999999999999999999999877555555555444457778


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADI  327 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~  327 (421)
                      +||||.|+++|+|+||++++.+....  +++.+.+........+.+.++|.++..+|....  ..++.+. +++.++++.
T Consensus       349 ~S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~  425 (517)
T PRK13355        349 SGLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQREL  425 (517)
T ss_pred             ecchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHH
Confidence            99999999999999999975432211  124444443333334678899999999886421  3455544 344566899


Q ss_pred             HHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHH
Q 014631          328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEE  405 (421)
Q Consensus       328 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~  405 (421)
                      +.+.|+++||+. +..|++++|+|++++.... +..++.+++..+++++||.+.||..|+.  ++++|++++.+++++++
T Consensus       426 l~~~L~~~~g~~-~~~p~g~fy~~~~l~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~  503 (517)
T PRK13355        426 VYNALNAIPGIS-AVKPKAAFYIFPKIDVKKF-NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLED  503 (517)
T ss_pred             HHHHHhcCCCcc-cCCCCeeeEEEeecCcccC-CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHH
Confidence            999999988988 5589999999998874211 1124667888888999999999999963  68999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 014631          406 GLGRIKAFCQRHA  418 (421)
Q Consensus       406 ~~~~l~~~~~~~~  418 (421)
                      ++++|.+++++++
T Consensus       504 a~~rl~~~~~~~~  516 (517)
T PRK13355        504 AMDRLADFFSYYR  516 (517)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998664

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=8.3e-53  Score=404.20  Aligned_cols=374  Identities=24%  Similarity=0.384  Sum_probs=305.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .+.++++++.|+|..+ .+++|+.+.+++.+.+.......|++..|.++||+++++|+++.+|+.+++++|++|+|++++
T Consensus        30 ~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a  108 (433)
T PRK06855         30 LGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA  108 (433)
T ss_pred             ccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence            4778999999998532 368899999999988766555689999999999999999999988999999999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHH-hhcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeCCCCCcccc
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANA-RHTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVNPGNPCGNV  198 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~p~nptG~~  198 (421)
                      +.+++. ++++||.|++++|+|+.+.... ...|.+++.++++++++|++|++++++.+.  ++++++++++||||||.+
T Consensus       109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~  187 (433)
T PRK06855        109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAV  187 (433)
T ss_pred             HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcC
Confidence            999985 7799999999999999876543 456888888888766778899999999886  357889999999999999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      +|.+++++|+++|++||++||+||+|.++.|.+..+.++..+..+.++|+++||||.|++||+|+||++++++.......
T Consensus       188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~  267 (433)
T PRK06855        188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK  267 (433)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence            99999999999999999999999999999887755556555544446799999999999999999999985321100001


Q ss_pred             HHHHHHhhhcccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631          279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS  357 (421)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  357 (421)
                      .+.+.+........+++.+.|.++..+++... +.++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~w~~l~~~  346 (433)
T PRK06855        268 KYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK-VNRTNGAFYMTVVFEDG  346 (433)
T ss_pred             HHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-ccCCCeeEEEeeccccc
Confidence            23444433332334678899999999997643 67889999999999999999999887877 55899999999999853


Q ss_pred             cc--------c-------------C-CCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec-CCHHHHHHHHHHHHHH
Q 014631          358 LL--------E-------------G-ISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA-IEPSALEEGLGRIKAF  413 (421)
Q Consensus       358 ~~--------~-------------~-~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~-~~~e~l~~~~~~l~~~  413 (421)
                      ..        .             + ..++.+++..+++++||.+.||..|+. ..++|+|++ .+++++++++++|.++
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~  426 (433)
T PRK06855        347 VLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEK  426 (433)
T ss_pred             cccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHH
Confidence            10        0             0 013567888888999999999999965 357999999 5899999999999999


Q ss_pred             HHHhh
Q 014631          414 CQRHA  418 (421)
Q Consensus       414 ~~~~~  418 (421)
                      ++++-
T Consensus       427 ~~~~~  431 (433)
T PRK06855        427 IEEYL  431 (433)
T ss_pred             HHHHh
Confidence            98653

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=2e-52  Score=399.10  Aligned_cols=371  Identities=25%  Similarity=0.423  Sum_probs=313.8

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ..++.++.+.++.+.....       +.++|+|+.|.|.    +++++.+.+++.+.+... ...|++..|.++||++++
T Consensus        34 ~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia  101 (413)
T PLN00175         34 KRLEKFKTTIFTQMSSLAI-------KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIA  101 (413)
T ss_pred             HHhhcCCCCHHHHHHHHhh-------cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHH
Confidence            3455566666666655432       4689999999987    466788999999988763 468999999999999999


Q ss_pred             HHHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631           97 DYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus        97 ~~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +++++++|+.++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.+++++++ +.+|++++
T Consensus       102 ~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l  180 (413)
T PLN00175        102 ERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDEL  180 (413)
T ss_pred             HHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHH
Confidence            99999889888887 79999999999999999999999999999999999999999999999999986543 78999999


Q ss_pred             HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccc
Q 014631          176 EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSK  254 (421)
Q Consensus       176 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK  254 (421)
                      ++.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|..+.+++. ..++..+.. .+++|+++||||
T Consensus       181 ~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK  259 (413)
T PLN00175        181 KAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGK  259 (413)
T ss_pred             HHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchh
Confidence            999888899999999999999999999999999999999999999999999988653 234444433 468999999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .|+++|+|+||++++        +++++.+..... ...+++.+.|.++..+|+. .+.++++.++.++++++.+.+.|+
T Consensus       260 ~~~~~G~RiG~~v~~--------~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~  330 (413)
T PLN00175        260 TFSLTGWKIGWAIAP--------PHLTWGVRQAHSFLTFATATPMQWAAVAALRA-PESYYEELKRDYSAKKDILVEGLK  330 (413)
T ss_pred             hccCcchheeeeEeC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999986        357777766543 3457888999999999975 357889999999999999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-----KNWLRITFAIEPSALEEGLG  408 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~~~  408 (421)
                      +. |+. +..|.+++|+|++++...   ..++.+++..+++++||.+.||..|+.     .+++|++++.++++++++++
T Consensus       331 ~~-g~~-~~~p~g~~f~~~~~~~~~---~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~  405 (413)
T PLN00175        331 EV-GFK-VYPSSGTYFVMVDHTPFG---FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVE  405 (413)
T ss_pred             HC-CCe-ecCCCeeEEEEEeccccC---CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHH
Confidence            87 777 557899999999874211   124678888888888999999998842     46899999989999999999


Q ss_pred             HHHHHHH
Q 014631          409 RIKAFCQ  415 (421)
Q Consensus       409 ~l~~~~~  415 (421)
                      +|.++++
T Consensus       406 rL~~~~~  412 (413)
T PLN00175        406 RMKTKLK  412 (413)
T ss_pred             HHHHHHh
Confidence            9998875

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-52  Score=396.44  Aligned_cols=377  Identities=22%  Similarity=0.321  Sum_probs=310.8

Q ss_pred             hhHHHHHHHHHHhcccc-CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhC
Q 014631           25 LTVRSALTIIKQNLKEN-DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL  103 (421)
Q Consensus        25 ~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~  103 (421)
                      .++|+-...+.+.+..- -..+.++|+.|.|..   +++++.+.+++.+.+.......|++..|.++||+++++++++.+
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~   95 (405)
T PRK06207         19 QEVRQSAAGLEALLRGEPLPGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFT   95 (405)
T ss_pred             HHHHhhhhhhhhhhcCCcCCCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHh
Confidence            44554444444333111 145779999999772   25667888888888776545689999999999999999999988


Q ss_pred             CCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc---CCCCccCCHHHHHhhh
Q 014631          104 PCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL---PEKGWEVDLDGLEALA  179 (421)
Q Consensus       104 ~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~d~e~l~~~~  179 (421)
                      |..+++ ++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.++++   .++++++|++++++.+
T Consensus        96 g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~  175 (405)
T PRK06207         96 GAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAF  175 (405)
T ss_pred             CCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhh
Confidence            988888 899999999999999999999999999999999999999999999999999875   2346889999999998


Q ss_pred             ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccccCC
Q 014631          180 DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRWIV  258 (421)
Q Consensus       180 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~  258 (421)
                      .++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+.+....++..++ ..+++++++||||.|++
T Consensus       176 ~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l  255 (405)
T PRK06207        176 KAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESL  255 (405)
T ss_pred             hhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccC
Confidence            88899999999999999999999999999999999999999999999988775544444332 24689999999999999


Q ss_pred             CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      +|+|+||++++        +++++.+...... ..+.+.+.|.++..+|+. ...++++..+.++++++.+.+.|+++++
T Consensus       256 pGlRiG~ii~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~  326 (405)
T PRK06207        256 SGYRLGVAFGS--------PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEG  326 (405)
T ss_pred             cccceEEEEcC--------HHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999985        3577777665432 345667889999888864 2356777788888899999999988878


Q ss_pred             ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      +. +..|++|+|+|++++...    .++.+++..+++++||.+.||..|+.  .+++|||++.+.+++++++++|.++++
T Consensus       327 ~~-~~~p~gg~fl~~~l~~~~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~  401 (405)
T PRK06207        327 VF-VRAPQAGSYLFPRLPRLA----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIE  401 (405)
T ss_pred             ce-ecCCCeeEEEEEeCcccC----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence            77 557889999999997421    14567887776788999999998864  579999999889999999999999998


Q ss_pred             Hhh
Q 014631          416 RHA  418 (421)
Q Consensus       416 ~~~  418 (421)
                      +++
T Consensus       402 ~~~  404 (405)
T PRK06207        402 RYR  404 (405)
T ss_pred             Hhh
Confidence            765

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=2e-51  Score=391.15  Aligned_cols=375  Identities=23%  Similarity=0.349  Sum_probs=308.1

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ..+..+.+..+..+........  ..++++++|+.|.|.    ++.++.+.+++.+.+.......|++..|.++||++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia   80 (389)
T PRK08068          7 ELLKQLPKQFFASLVAKVNKKV--AEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAA   80 (389)
T ss_pred             hHhhhcCccHHHHHHHHHHHHH--hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Confidence            3455555566666555443222  236789999999876    4566788999998887655568998999999999999


Q ss_pred             HHHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631           97 DYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus        97 ~~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +|+++.+|.+++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++++.++++.+|++++
T Consensus        81 ~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l  160 (389)
T PRK08068         81 DFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKI  160 (389)
T ss_pred             HHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHH
Confidence            99998888888888 89999999999999999999999999999999999999999999999999987666788999999


Q ss_pred             HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc-cCCCCCEEEEccccc
Q 014631          176 EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV-FGSTVPVITLGSMSK  254 (421)
Q Consensus       176 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK  254 (421)
                      ++.+.++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++.. .+..+++++++||||
T Consensus       161 ~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK  240 (389)
T PRK08068        161 PEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSK  240 (389)
T ss_pred             HHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchh
Confidence            9988778899999999999999999999999999999999999999999998876543333222 233457899999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .|+++|+|+||++++        +++++.+...... ..+.++..|.++..++.. ...++++.++.++++++.+.+.|+
T Consensus       241 ~~g~~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~  311 (389)
T PRK08068        241 TFNMAGWRVAFAVGN--------ESVIEAINLLQDHLFVSLFGAIQDAAIEALLS-DQSCVAELVARYESRRNAFISACR  311 (389)
T ss_pred             ccCCccceeEeEecC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999975        4577777666532 234555677877777753 347788899999999999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIK  411 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~  411 (421)
                      ++ |+. +..|.+|+|+|+.++..     .++.++...+++++||.+.||..|+.  .+++||+++.+++++.+++++|.
T Consensus       312 ~~-g~~-~~~~~g~~~~~v~~~~~-----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~  384 (389)
T PRK08068        312 EI-GWE-VDAPKGSFFAWMPVPKG-----YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIG  384 (389)
T ss_pred             HC-CCc-ccCCCeeEEEEEECCCC-----CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHH
Confidence            87 777 55788899999998742     14677888877778999999998875  57999999988889999998887


Q ss_pred             HH
Q 014631          412 AF  413 (421)
Q Consensus       412 ~~  413 (421)
                      ++
T Consensus       385 ~~  386 (389)
T PRK08068        385 KL  386 (389)
T ss_pred             Hh
Confidence            63

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.1e-51  Score=392.03  Aligned_cols=371  Identities=22%  Similarity=0.354  Sum_probs=309.8

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +..+.++.+.++.+...+.  +..+.++++|+.|.|.    +++++.+.+++.+.+.......|+ ..|.++||+++++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~   81 (399)
T PRK07681          9 MKAFQSSIFSELGAYKKEK--IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEY   81 (399)
T ss_pred             HhhcCccHHHHHHHHHHHh--hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHH
Confidence            3334455555555443322  1237789999999876    466788999998887654333454 47999999999999


Q ss_pred             HhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           99 LNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        99 l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      +++.+|..+++ ++|++|+|+++++..++.+++++||.|++++|+|+.+...++..|++++.++++.+++|.+|++++++
T Consensus        82 ~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~  161 (399)
T PRK07681         82 YNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPE  161 (399)
T ss_pred             HHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHH
Confidence            99988988998 89999999999999999999999999999999999999999999999999998766678899999998


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~  256 (421)
                      .+.++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++..++. .+++|+++||||.|
T Consensus       162 ~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~  241 (399)
T PRK07681        162 EIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSY  241 (399)
T ss_pred             hccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccccc
Confidence            88778899999999999999999999999999999999999999999999887655445444443 35789999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+|+||++++        +++++.+..... ...+++.+.|.++..+|+.. ..++++.++.++++++.+.+.|+++
T Consensus       242 ~~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~  312 (399)
T PRK07681        242 SLAGSRIGYMIGN--------EEIVRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTF  312 (399)
T ss_pred             CCccceeEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999985        357777766653 23477888999999999753 4678888889999999999999987


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                       |+. +..|.+|+|+|++++..     .++.+++.++++++||.+.||..|+.  ++++|++++.+++++++++++|++
T Consensus       313 -g~~-~~~p~~g~f~~~~l~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~  384 (399)
T PRK07681        313 -GWN-VDKPAGSMFVWAEIPKG-----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN  384 (399)
T ss_pred             -CCc-ccCCCeeeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence             777 44788999999999742     24677888888778999999998865  469999999888999999999988

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=3.2e-51  Score=389.48  Aligned_cols=375  Identities=21%  Similarity=0.354  Sum_probs=314.9

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      .++.+.+..+.++....++..  ..++++++|+.|.|.    +++++.+.+++.+.+.... ..|++..|.+++|+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~   80 (387)
T PRK08960          8 RSRDIEPFHVMALLARANELE--AAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALREAIAG   80 (387)
T ss_pred             HHHhCCchHHHHHHHHHHHHH--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHH
Confidence            355566677777776655432  247889999999976    5678999999999887543 479889999999999999


Q ss_pred             HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      ++++.+|+++++++|++|+|++++++.++.+++++||+|++++|+|+.+...+...|.+++.++++.++++.+|++++++
T Consensus        81 ~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  160 (387)
T PRK08960         81 FYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVER  160 (387)
T ss_pred             HHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHH
Confidence            99998898899999999999999999999999999999999999999999999999999999998766678899999999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI  257 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  257 (421)
                      .++++++.+++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++. ..++...  .+++++++||||.|+
T Consensus       161 ~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~SK~~g  237 (387)
T PRK08960        161 HWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFSKYFG  237 (387)
T ss_pred             HhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeecccccC
Confidence            9888889999999999999999999999999999999999999999999877543 2233332  457999999999999


Q ss_pred             CCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      ++|+|+||++++        +++++.+..... ...+++.+.|.++..++......++.+.++.++++++.+.+.|+++ 
T Consensus       238 ~~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-  308 (387)
T PRK08960        238 MTGWRLGWLVAP--------PAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-  308 (387)
T ss_pred             CcccEEEEEEcC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            999999999986        356777766543 3446788999998888865345788888999999999999999987 


Q ss_pred             CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      ++.++..|.+|+|+|++++...    .++.+++.++++++||.+.||..|+.   .+++|++++.+.+++.+++++|.++
T Consensus       309 ~~~~~~~p~g~~f~~~~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~  384 (387)
T PRK08960        309 GFGIAVEPQGAFYLYADISAFG----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARG  384 (387)
T ss_pred             CCcCCcCCCeeEEEEEeccccC----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence            6653346889999999987421    14677887887888999999998864   4699999998889999999999887


Q ss_pred             HH
Q 014631          414 CQ  415 (421)
Q Consensus       414 ~~  415 (421)
                      ++
T Consensus       385 ~~  386 (387)
T PRK08960        385 LR  386 (387)
T ss_pred             Hh
Confidence            64

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=1.5e-51  Score=392.19  Aligned_cols=355  Identities=19%  Similarity=0.305  Sum_probs=296.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~  120 (421)
                      .+.++|+|+.|.|.    +++++.+.+++.+.+.......|++..|.++||+++++|+.+.+|++++++ +|++|+|+++
T Consensus        28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~  103 (388)
T PRK07366         28 AGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE  103 (388)
T ss_pred             cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence            37889999999976    567888999999887655456799989999999999999999889889998 6999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      ++.+++.+++++||+|++++|+|+.+...++..|++++.++++.++++.+|++++++.+.++++++++++||||||.++|
T Consensus       104 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s  183 (388)
T PRK07366        104 GTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAP  183 (388)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCC
Confidence            99999999999999999999999999999999999999999876667888999998877777899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCC-cccccccCCC-CCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP-YVRMGVFGST-VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      .+++++|+++|++||++||+||+|.++.+++.. ..++..++.. +++++++||||.|+++|+|+||++++        +
T Consensus       184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~--------~  255 (388)
T PRK07366        184 LSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN--------A  255 (388)
T ss_pred             HHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC--------H
Confidence            999999999999999999999999999886643 3344444433 46899999999999999999999985        4


Q ss_pred             HHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631          279 RIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS  357 (421)
Q Consensus       279 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  357 (421)
                      ++++.+....... .+.++..+.++.+.+.. .+.++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++..
T Consensus       256 ~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~~~~~  332 (388)
T PRK07366        256 QLIQALRQVKAVVDFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPEATMYVWAKLPEP  332 (388)
T ss_pred             HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEEEECCcc
Confidence            5777777665432 23323334444444532 36788999999999999999999987 776 44789999999999742


Q ss_pred             cccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          358 LLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       358 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      ..   .++.+++..+++++||.+.||..|+.  .+++|++++.+++++++++++|.+++
T Consensus       333 ~~---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l  388 (388)
T PRK07366        333 WQ---GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL  388 (388)
T ss_pred             cC---CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence            10   13567777787888999999998865  47999999988999999999998753

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.2e-51  Score=387.39  Aligned_cols=370  Identities=25%  Similarity=0.460  Sum_probs=307.4

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      .++.+....++.+....+.      .+++++|+.|.|.    +++++.+.+++.+.... ....|++..|.+++|+++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~------~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~   77 (384)
T PRK06348          9 KYQQMEVNIMAEIATLAKK------FPDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIK   77 (384)
T ss_pred             HHhcCCccHHHHHHHHHHh------cCCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHH
Confidence            3445555666666665432      3578999999876    45567776666555443 34689999999999999999


Q ss_pred             HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      ++++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++..+++++.+|++++++
T Consensus        78 ~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~  157 (384)
T PRK06348         78 YYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEA  157 (384)
T ss_pred             HHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHH
Confidence            99988898999999999999999999999999999999999999999999999999999998887656678899999999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~  256 (421)
                      .+.++++++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++. ..++..++. .+++++++||||.|
T Consensus       158 ~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~  236 (384)
T PRK06348        158 LITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKDF  236 (384)
T ss_pred             hhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhcc
Confidence            8888889999999999999999999999999999999999999999999987653 334444432 46899999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+|+||++++        +++++.+..... ...+++.+.|.++..++.. .+.+.++.++.++++++.+.+.|+++
T Consensus       237 ~l~GlRiG~~v~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~  307 (384)
T PRK06348        237 AMTGWRIGYVIAP--------DYIIETAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESI  307 (384)
T ss_pred             CCccccceeeecC--------HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999986        356677766553 2346788999999888864 45678888999999999999999988


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      +++. +..|++|+|+|++++...    .++.+++..+++++||.+.||+.|+.  ++++|+|++.+++++++++++|++.
T Consensus       308 ~~~~-~~~p~gg~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~  382 (384)
T PRK06348        308 PNLS-LHPPKGSIYAFINIKKTG----LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM  382 (384)
T ss_pred             CCce-eccCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence            7776 557889999999987421    14677888877788999999999875  4799999998899999999998764

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=3.5e-51  Score=398.14  Aligned_cols=398  Identities=22%  Similarity=0.373  Sum_probs=308.8

Q ss_pred             hHHhhhhhhhHHHHHHHHHHh---cccc----CCCCeeeccCCCCC----------------CCC-C--------CCCcH
Q 014631           17 EHITATATLTVRSALTIIKQN---LKEN----DPRPIIPLGHGDPS----------------AFP-C--------FRTTP   64 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~i~l~~g~~~----------------~~~-~--------~~~~~   64 (421)
                      ..+..++.+...++..+.++.   +.+.    ++.++|+|++|+|.                ... .        ...|.
T Consensus        12 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~   91 (481)
T PTZ00377         12 PRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPA   91 (481)
T ss_pred             HHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCH
Confidence            345555555444444333332   2121    46899999999985                211 0        01255


Q ss_pred             HHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCC
Q 014631           65 VAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKP  141 (421)
Q Consensus        65 ~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p  141 (421)
                      .+.+++.+.++..  ....|++..|+++||+++++|+++.+|+.+++++|++|+|+++++..++.+++ ++||.|+++.|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P  171 (481)
T PTZ00377         92 DVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIP  171 (481)
T ss_pred             HHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCC
Confidence            7778877766542  34579999999999999999999988999999999999999999999999998 79999999999


Q ss_pred             CCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631          142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG  215 (421)
Q Consensus       142 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~  215 (421)
                      +|+.|...++..|.+++.++++.+++|++|++++++.+.+      +++++++++||||||.++|.+++++|+++|++||
T Consensus       172 ~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~  251 (481)
T PTZ00377        172 QYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKG  251 (481)
T ss_pred             CchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCC
Confidence            9999999999999999999988777899999999998764      6888999999999999999999999999999999


Q ss_pred             cEEEEcccccccccCC-CCccccc----ccCCC----CCEEEEcccccc-cCCCCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631          216 IMVISDEVYDHLTFGS-TPYVRMG----VFGST----VPVITLGSMSKR-WIVPGWRLGWLVTSDPSGILQELRIVDSIK  285 (421)
Q Consensus       216 ~~li~De~~~~~~~~~-~~~~~~~----~~~~~----~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~  285 (421)
                      ++||+||+|..+.|++ ..+.++.    .++..    .++++++||||. ++++|+|+||+++.+..     +++++.+.
T Consensus       252 ~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p-----~~li~~l~  326 (481)
T PTZ00377        252 IVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP-----PEVREQIY  326 (481)
T ss_pred             CEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC-----HHHHHHHH
Confidence            9999999999998853 2333322    22221    268999999997 58899999999873100     35777776


Q ss_pred             hhcccccCCchHHHHHHHHHhhcc---c---hhH---HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631          286 GYLNISSGPATFVQGAVPQIFKNT---K---EDF---FSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~l~~~---~---~~~---~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      .......+++.++|.++..+++..   .   +.+   +.+..+.++++++.+.+.|++++|+. +..|++|+|+|++++.
T Consensus       327 ~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~gg~fl~~~~~l  405 (481)
T PTZ00377        327 KLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVEGAMYAFPRIEL  405 (481)
T ss_pred             HHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCCeeEEEEeeccC
Confidence            665444468889999999998631   1   123   33334457899999999999988888 5589999999987642


Q ss_pred             cc--c-----cCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631          357 SL--L-----EGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       357 ~~--~-----~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      +.  .     .+..++..++..+++++||.+.||+.|+.   .+++|+|++.+++++++++++|.++++++.++
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~  479 (481)
T PTZ00377        406 PEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKK  479 (481)
T ss_pred             chhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHh
Confidence            10  0     00112455677888999999999999974   35899999988899999999999999887653

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.5e-51  Score=387.83  Aligned_cols=381  Identities=21%  Similarity=0.330  Sum_probs=307.9

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +..++...+.++....+ ++.+ .+.++++|+.|.|.    .+.++.+.+++.+.+.......|++..|.++||+++++|
T Consensus        10 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~   83 (403)
T PRK08636         10 IKRLPKYVFAEVNELKM-AARR-AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNW   83 (403)
T ss_pred             HHhCCccHHHHHHHHHH-HHHh-cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHH
Confidence            44445555555555443 2322 36789999999877    344666777777766554457899999999999999999


Q ss_pred             HhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH--
Q 014631           99 LNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL--  175 (421)
Q Consensus        99 l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l--  175 (421)
                      +++.+|+.++++ +|++|+|+++++..++++++++||.|++++|+|+.+...++..|++++.++++.++++++|++.+  
T Consensus        84 l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  163 (403)
T PRK08636         84 YKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFE  163 (403)
T ss_pred             HHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhh
Confidence            999889888887 79999999999999999999999999999999999999999999999999986556678998754  


Q ss_pred             --Hhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEE
Q 014631          176 --EALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITL  249 (421)
Q Consensus       176 --~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~  249 (421)
                        ++.++   ++++.+++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++..++. .+.++++
T Consensus       164 ~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~  243 (403)
T PRK08636        164 NLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVES  243 (403)
T ss_pred             HHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEE
Confidence              45443   46788999999999999999999999999999999999999999999887654455555543 2467889


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC  328 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  328 (421)
                      +||||.|+++|+|+||++++        +++++.+...... ..+++.+.|.++..+++. ...++++.++.++++++.+
T Consensus       244 ~S~SK~~~~~GlRiG~iv~~--------~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l  314 (403)
T PRK08636        244 YTLSKSYNMAGWRVGFVVGN--------KKLVGALKKIKSWLDYGMFTPIQVAATIALDG-DQSCVEEIRETYRKRRDVL  314 (403)
T ss_pred             EecccccCCccceeeeeeCC--------HHHHHHHHHHHHHhcccCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999985        3567776665432 235566778777766653 3678888899999999999


Q ss_pred             HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHH
Q 014631          329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEG  406 (421)
Q Consensus       329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~  406 (421)
                      .+.|++. ++. +..|.+|+|+|++++....  ..++.+++..+++++||.+.||..|+.  .+++||+++.++++++++
T Consensus       315 ~~~L~~~-~~~-~~~p~~g~~~~~~l~~~~~--~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~  390 (403)
T PRK08636        315 IESFANA-GWE-LQKPRASMFVWAKIPEPAR--HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQA  390 (403)
T ss_pred             HHHHHHC-CCc-ccCCCcceEEEEECCCccC--CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHH
Confidence            9999987 776 5578999999999974310  013567887878889999999998865  479999999889999999


Q ss_pred             HHHHHHHHHHhh
Q 014631          407 LGRIKAFCQRHA  418 (421)
Q Consensus       407 ~~~l~~~~~~~~  418 (421)
                      +++|+++++.+.
T Consensus       391 ~~rl~~~l~~~~  402 (403)
T PRK08636        391 ARNIKKFLKELE  402 (403)
T ss_pred             HHHHHHHHHhhc
Confidence            999999997753

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-50  Score=385.31  Aligned_cols=351  Identities=25%  Similarity=0.436  Sum_probs=299.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~  120 (421)
                      .++++++|+.|.|.    +++++.+.+++.+.+.......|++..|.+++|+++++|+++.+|..++++ +|++|+|+++
T Consensus        29 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~  104 (385)
T PRK09276         29 RGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE  104 (385)
T ss_pred             cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence            37789999999876    466788999999888754456899989999999999999998888878887 5899999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      ++..++..++++||+|++++|+|..+...++..|.+++.++.+.++++.+|++++++.+.++++++++++||||||.+++
T Consensus       105 ~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  184 (385)
T PRK09276        105 GIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVAD  184 (385)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999876667888999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      .+++++|+++|++||++||+||+|.++.+++....++..++. .+++++++||||.|+++|+|+||++++        ++
T Consensus       185 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~--------~~  256 (385)
T PRK09276        185 LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN--------AD  256 (385)
T ss_pred             HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC--------HH
Confidence            999999999999999999999999998876655555555543 356899999999999999999999985        35


Q ss_pred             HHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631          280 IVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL  358 (421)
Q Consensus       280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  358 (421)
                      +++.+..... ...+.+.+.|.++..++.. .+.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++.. 
T Consensus       257 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~v~~~~~-  332 (385)
T PRK09276        257 LIAGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPKATFYVWAPVPKG-  332 (385)
T ss_pred             HHHHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEECCCC-
Confidence            6777766543 2345667788888888864 36788888999999999999999987 777 55788899999998743 


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                          .++.+++.++++++||.+.||..|+.  ++++||+++.+++++.+++++|.+
T Consensus       333 ----~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~  384 (385)
T PRK09276        333 ----YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK  384 (385)
T ss_pred             ----CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence                24677888887788999999998865  469999999888899999988864

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=1.5e-50  Score=384.77  Aligned_cols=351  Identities=27%  Similarity=0.458  Sum_probs=300.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~  120 (421)
                      .++++++|+.|.|.    +++++.+.+++.+.+.......|++..|++++|+++++|+++.+|.+++++ +|++|+|+++
T Consensus        27 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~  102 (383)
T TIGR03540        27 EGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE  102 (383)
T ss_pred             cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence            37899999999976    466788999999887765557899999999999999999998888877776 6899999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      ++..++..++++||+|++++|+|..+...++..|++++.++.+.++++.+|++++++.+.++++++++++||||||.+++
T Consensus       103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~  182 (383)
T TIGR03540       103 GIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAP  182 (383)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCC
Confidence            99999999999999999999999999999999999999999876667888999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      .+++++|+++|++||++||+||+|.++.+.+....++..++. .+++++++||||.|+++|+|+||++++        ++
T Consensus       183 ~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~--------~~  254 (383)
T TIGR03540       183 LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN--------AD  254 (383)
T ss_pred             HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC--------HH
Confidence            999999999999999999999999998886655555555543 357899999999999999999999985        35


Q ss_pred             HHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631          280 IVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL  358 (421)
Q Consensus       280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  358 (421)
                      +++.+..... ...+++.+.|.++..+++. ...++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++.. 
T Consensus       255 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~~~~~~l~~~-  330 (383)
T TIGR03540       255 LIAGLGKVKTNVDSGVFQAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPKATFYVWVPVPEG-  330 (383)
T ss_pred             HHHHHHHHHHhcccCCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCCcceEEEEECCCC-
Confidence            7777766543 2346677889998888875 36788888999999999999999987 787 55788899999998742 


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                          .++.+++.++++++||.+.||..|+.  .+++|++++.+++++.+++++|.+
T Consensus       331 ----~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~  382 (383)
T TIGR03540       331 ----YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK  382 (383)
T ss_pred             ----CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence                24677888887888999999998865  468999999888999999988764

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-50  Score=385.77  Aligned_cols=361  Identities=23%  Similarity=0.398  Sum_probs=308.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      ++.++++|+.|.|.    ++.++.+.+++.+.+... ...|++..|.+++|+++++++++.+|..+++++|++|+|+++|
T Consensus        31 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a  105 (402)
T PRK06107         31 AGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERG-ETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQA  105 (402)
T ss_pred             ccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            37789999999977    456788999999988753 3579999999999999999999888988899999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ++.++.+++++||+|++++|+|..|...+...+.+++.++.+.++++.+|++++++.+.++++++++++|+||||.++|.
T Consensus       106 l~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~  185 (402)
T PRK06107        106 IFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSR  185 (402)
T ss_pred             HHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCH
Confidence            99999999999999999999999998888888888888887655678899999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHhc-CcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          202 QQLQKIAEKARKL-GIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       202 ~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      +++++|+++|+++ |+++|+||+|+.+.+.+....++.....  .+++++++||||.|+++|+|+||++++        +
T Consensus       186 ~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~--------~  257 (402)
T PRK06107        186 AELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGP--------A  257 (402)
T ss_pred             HHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecC--------H
Confidence            9999999999998 9999999999998887655444444432  358999999999999999999999985        3


Q ss_pred             HHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631          279 RIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS  357 (421)
Q Consensus       279 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  357 (421)
                      ++++.+..... ...+++.+.|.++..+|.. .+.++++.++.++++++.+.+.|++++|+. +..|++|+|+|++++..
T Consensus       258 ~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~-~~~p~gg~~~~~~~~~~  335 (402)
T PRK06107        258 DLIAAINKLQSQSSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLS-CLVPDGAFYLYVNCAGL  335 (402)
T ss_pred             HHHHHHHHHHHhcccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCcceEEeeecccc
Confidence            57777777654 2457889999999999964 357888889999999999999999887887 55889999999988421


Q ss_pred             ---ccc-C--CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          358 ---LLE-G--ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       358 ---~~~-~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                         ..+ +  ..++.+++..+++++||.+.||..|+..+++|++++.++|++++++++|.+.+.++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~  401 (402)
T PRK06107        336 IGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAAL  401 (402)
T ss_pred             cccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence               000 0  11456788888889999999999998889999999999999999999999998765

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=1e-50  Score=387.21  Aligned_cols=369  Identities=22%  Similarity=0.376  Sum_probs=305.1

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL   99 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l   99 (421)
                      .+++...++.+...++. .+...|.++++|+.|.|.    +++++.+.+++.+.+..  ...|++..|.++||+++++|+
T Consensus         6 ~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~   78 (396)
T PRK09147          6 DRLQPYPFEKLRALFAG-VTPPADLPPISLSIGEPK----HPTPAFIKDALAANLDG--LASYPTTAGLPALREAIAAWL   78 (396)
T ss_pred             hcCCcchHHHHHHHHHh-hhhccCCCeEecCCCCCC----CCCCHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHH
Confidence            34445556666655543 223458899999999976    46678899999887653  468999999999999999999


Q ss_pred             hhhCCCC-CCCC-cEEEcCCHHHHHHHHHHHhcCC---CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHH
Q 014631          100 NSELPCK-LSPD-DVYLTAGCKQAIQVILTVLARP---GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG  174 (421)
Q Consensus       100 ~~~~~~~-~~~~-~i~~~~g~~~al~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~  174 (421)
                      ++.+|.. ++++ +|++|+|+++++..++++++++   ||.|++++|+|..+...++..|++++.+|++.+++|++|+++
T Consensus        79 ~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~  158 (396)
T PRK09147         79 ERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDA  158 (396)
T ss_pred             HHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHH
Confidence            9888887 8885 8999999999999999999999   899999999999999999999999999998777778999999


Q ss_pred             HHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Cccc-cc---ccC--CCCCEE
Q 014631          175 LEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVR-MG---VFG--STVPVI  247 (421)
Q Consensus       175 l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~---~~~--~~~~~i  247 (421)
                      +++.+.++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++. ...+ +.   ..+  ..++++
T Consensus       159 l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi  238 (396)
T PRK09147        159 VPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLV  238 (396)
T ss_pred             HHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEE
Confidence            9887777899999999999999999999999999999999999999999999887653 1111 11   121  236899


Q ss_pred             EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD  326 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  326 (421)
                      +++||||.|+++|+|+||++++        +++++.+..... ...+++.+.|.++.+.+..  ..++.+.++.++++++
T Consensus       239 ~~~S~SK~~~~~GlRiG~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~  308 (396)
T PRK09147        239 VFHSLSKRSNVPGLRSGFVAGD--------AALLKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFD  308 (396)
T ss_pred             EEeccccccCCccceeeeecCC--------HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHH
Confidence            9999999999999999999986        356777765543 2346777888887777743  5678888999999999


Q ss_pred             HHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--------CCeEEEEecC
Q 014631          327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--------KNWLRITFAI  398 (421)
Q Consensus       327 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~iRi~~~~  398 (421)
                      .+.+.|++.  +. +..|++|+|+|++++.       ++.+++..+++++||.+.||..|+.        .+++||+++.
T Consensus       309 ~~~~~L~~~--~~-~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~  378 (396)
T PRK09147        309 AVTPILAPV--LD-VQLPDAGFYLWAKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA  378 (396)
T ss_pred             HHHHHHHHh--cC-CCCCCeeEEEEEECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC
Confidence            999999874  44 3478999999999872       4677888888888999999998752        4689999998


Q ss_pred             CHHHHHHHHHHHHHHHH
Q 014631          399 EPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       399 ~~e~l~~~~~~l~~~~~  415 (421)
                      +++++++++++|.+++.
T Consensus       379 ~~~~l~~~l~rl~~~~~  395 (396)
T PRK09147        379 PLAECVEAAERIVDFCR  395 (396)
T ss_pred             CHHHHHHHHHHHHHHhc
Confidence            89999999999998763

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=3.6e-50  Score=384.25  Aligned_cols=391  Identities=25%  Similarity=0.440  Sum_probs=307.9

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +.+++...+.++....++.  +..++++++|+.|+|+.. .+++++.+.+++.+.+..  ...|++..|.++||++++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~   84 (404)
T PRK09265         10 LENVCYDIRGPVLKEAKRL--EEEGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQY   84 (404)
T ss_pred             HHhcCcchhHHHHHHHHHH--HHcCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHH
Confidence            4444444444444444432  345789999999998742 256788888888877653  35899999999999999999


Q ss_pred             HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631           99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus        99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      ++...+.++++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.+.++++.+|++++++.
T Consensus        85 ~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~  164 (404)
T PRK09265         85 YQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSK  164 (404)
T ss_pred             HhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHh
Confidence            98654447889999999999999999999999999999999999999999999999999888876556678999999998


Q ss_pred             hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631          179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV  258 (421)
Q Consensus       179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  258 (421)
                      +.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++++++||||.|++
T Consensus       165 ~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~  244 (404)
T PRK09265        165 ITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRV  244 (404)
T ss_pred             ccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccC
Confidence            88889999999999999999999999999999999999999999999998876555555555544568999999999999


Q ss_pred             CCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      +|+|+||++++.+....  +.+++.+........+++.+.|.++..+|..... ..+.+..+++.++++.+.+.|+++++
T Consensus       245 pGlRiG~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~  322 (404)
T PRK09265        245 AGFRVGWMVLSGPKKHA--KGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPG  322 (404)
T ss_pred             cccceEEEEEeCchHHH--HHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999975432111  2244444433233346788899999888864211 11222234677888999999988888


Q ss_pred             ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      +. +..|.+|+|+|++++.... +..++.+++.+++.++||.+.||..|+.  .+++|++++.+++++++++++|.++++
T Consensus       323 ~~-~~~p~~g~~l~~~~~~~~~-~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~  400 (404)
T PRK09265        323 VS-CVKPKGALYAFPKLDPKVY-PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLS  400 (404)
T ss_pred             Cc-ccCCCcceEEEEEeccccc-CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence            87 5589999999999874311 0113556677788899999999999853  579999999889999999999999987


Q ss_pred             Hhh
Q 014631          416 RHA  418 (421)
Q Consensus       416 ~~~  418 (421)
                      .+.
T Consensus       401 ~~~  403 (404)
T PRK09265        401 GYR  403 (404)
T ss_pred             Hhc
Confidence            654

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=8.9e-51  Score=385.67  Aligned_cols=353  Identities=25%  Similarity=0.452  Sum_probs=300.0

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAI  122 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al  122 (421)
                      ..+|+|+.|.|.    +++++.+.+++.+.+... ...|++..|++++|+++++++++.+|..++++ +|++|+|+++++
T Consensus        20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al   94 (378)
T PRK07682         20 EGVISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL   94 (378)
T ss_pred             CCeEEeCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            478999999977    355677888888877643 45798889999999999999999888888876 799999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .+++++++++||+|++++|+|+.+...++..|.+++.++.+.++++++|++++++.+.++++++++++|+||||.++|.+
T Consensus        95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~  174 (378)
T PRK07682         95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS  174 (378)
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence            99999999999999999999999999999999999999876556788999999999888899999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++++|+++|++||+++|+||+|.++.+++. ..++..+.. .+++++++||||.|+++|+|+||++++        ++++
T Consensus       175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~i  245 (378)
T PRK07682        175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP--------VYFS  245 (378)
T ss_pred             HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcC--------HHHH
Confidence            999999999999999999999999988653 223333332 467999999999999999999999985        3577


Q ss_pred             HHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          282 DSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       282 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      +.+..... ...+++.+.|.++..+|+.. +.++++.++.++++++.+.+.|+++ ++. +..|++++|+|+.++...  
T Consensus       246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~~~~~~~~--  320 (378)
T PRK07682        246 EAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAFPSISSTG--  320 (378)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEEEeccCCC--
Confidence            77765543 23467789999999999753 4567888899999999999999987 877 557889999999885321  


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                        .++.+++..+++++||.+.||..|+.  ++++|+|++.+++++++++++|+++++++
T Consensus       321 --~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        321 --LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             --CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence              24677888877788999999998865  58999999988999999999999998764

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=4.3e-50  Score=383.02  Aligned_cols=360  Identities=23%  Similarity=0.376  Sum_probs=299.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a  121 (421)
                      +.++++|+.|.|.    +++++.+.+++.+.+.......|++..|.++||+++++|+++++|..++++ +|++|+|++++
T Consensus        29 ~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a  104 (405)
T PRK09148         29 GADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG  104 (405)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence            6789999999876    456788888888877654456899999999999999999998888888887 89999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +..++.+++++||+|++++|+|+.+...+...|++++.++.+.++.+..++++..+...++++.+++++||||||.++|.
T Consensus       105 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~  184 (405)
T PRK09148        105 FANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADL  184 (405)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCH
Confidence            99999999999999999999999999999999999999998665554445555444444678899999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      +++++|+++|++||++||+||+|.++.+++..+.++..++. .+++++++||||.|+++|+|+||++++        +++
T Consensus       185 ~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~--------~~~  256 (405)
T PRK09148        185 DFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGN--------ERL  256 (405)
T ss_pred             HHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCC--------HHH
Confidence            99999999999999999999999998876654444444432 346788999999999999999999985        357


Q ss_pred             HHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          281 VDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       281 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      ++.+...... ..+++.+.|.++..+|+. .+.++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++....
T Consensus       257 i~~l~~~~~~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~l~~~~~  333 (405)
T PRK09148        257 IAALTRVKSYLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRA-GWD-IPPPAASMFAWAPIPEAFR  333 (405)
T ss_pred             HHHHHHHHHHhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cCCCCeeEEEEEECCCccC
Confidence            7777766542 346778899999998864 35788888999999999999999987 776 4478999999999874210


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                        ..+..++...+++++||.+.||..|+.  .+++||+++.+.+++.+++++|.+++.++..
T Consensus       334 --~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~~~  393 (405)
T PRK09148        334 --HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSSADE  393 (405)
T ss_pred             --CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence              013567777777788999999998865  4799999998899999999999999987643

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=6.4e-50  Score=380.90  Aligned_cols=377  Identities=23%  Similarity=0.429  Sum_probs=308.5

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +.....+.++.+.....+ .. ..++.+++|+.|.|.    +++++.+.+++.+.+... ...|++..|.+++|+++++|
T Consensus         7 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~   79 (388)
T PRK07337          7 VDAIEPFYVMELAKEAQA-LE-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAW   79 (388)
T ss_pred             hHhcCchHHHHHHHHHHH-HH-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            444445555555544432 21 247789999999976    456788899998887653 45799889999999999999


Q ss_pred             HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631           99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus        99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +++.+|+.+++++|++|+|+++++..++.+++++||+|++++|+|.++...+...|++++.++.+.++++++|++++++.
T Consensus        80 ~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  159 (388)
T PRK07337         80 YARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAA  159 (388)
T ss_pred             HHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhh
Confidence            99988988999999999999999999999999999999999999999999999999999999987666788999999999


Q ss_pred             hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631          179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV  258 (421)
Q Consensus       179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  258 (421)
                      +.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+.+.. .+....  .+++++++||||.|++
T Consensus       160 ~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~~S~SK~~~~  236 (388)
T PRK07337        160 WGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITINSFSKYFNM  236 (388)
T ss_pred             cCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEEEechhhcCC
Confidence            9888999999999999999999999999999999999999999999998776542 222222  3568999999999999


Q ss_pred             CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      +|+|+||++++        +++.+.+..... ...+.+.+.|.++..++......++.+.++.++++++.+.+.|+++ +
T Consensus       237 ~G~RiG~~~~~--------~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~  307 (388)
T PRK07337        237 TGWRLGWLVVP--------EALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-G  307 (388)
T ss_pred             chhheeeeecC--------HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence            99999999986        356677766543 3346788899998888864333556778889999999999999986 6


Q ss_pred             ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      +.+...|++|+|+|++++....++..++.+++.++++++||.+.||..|+.   .+++|++++.+++++++++++|.+++
T Consensus       308 ~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        308 FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF  387 (388)
T ss_pred             CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence            653236889999999997421111124677888888889999999999865   47999999988999999999998865

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.5e-50  Score=381.69  Aligned_cols=352  Identities=22%  Similarity=0.388  Sum_probs=297.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD-VYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~-i~~~~g~~~  120 (421)
                      .|.++++|+.|+|.    ++.|+.+.+++.+.+.......|++..|.++||+++++|+++.+|..+++++ |++|+|+++
T Consensus        33 ~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~  108 (394)
T PRK05942         33 QGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE  108 (394)
T ss_pred             cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence            36789999999876    3456777787777765544568999999999999999999988888888884 899999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      ++..++.+++++||+|++++|+|..+...+...|++++.++++.+++|.+|++++++.+.++++++++++||||||.++|
T Consensus       109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s  188 (394)
T PRK05942        109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAP  188 (394)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCC
Confidence            99999999999999999999999999888899999999999876677889999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      .+++++|+++|+++|+++|+||+|.++.+++....++..++. .+.+++++||||.|+++|+|+||++++        ++
T Consensus       189 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~--------~~  260 (394)
T PRK05942        189 REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN--------RH  260 (394)
T ss_pred             HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC--------HH
Confidence            999999999999999999999999998876654445444432 345788999999999999999999985        45


Q ss_pred             HHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631          280 IVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL  358 (421)
Q Consensus       280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  358 (421)
                      +++.+..... ...+.+.+.|.++..+++. .+.+.++.+++++++++.+.+.|++. ++. +..|++++|+|++++.. 
T Consensus       261 l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~f~~~~~~~~-  336 (394)
T PRK05942        261 IIQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGEL-GWN-IPPTKATMYLWVPCPVG-  336 (394)
T ss_pred             HHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeeEEEEECCCC-
Confidence            7777776553 2346777889998888864 45678888999999999999999887 777 55788899999998742 


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                          .++.+++.++++++||.+.||..|+.  .+++|++++.+.+.+.+++++|.++
T Consensus       337 ----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~  389 (394)
T PRK05942        337 ----MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA  389 (394)
T ss_pred             ----CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence                14667777788889999999998864  5799999997788888888888764

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-49  Score=379.36  Aligned_cols=370  Identities=27%  Similarity=0.461  Sum_probs=309.1

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL   99 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l   99 (421)
                      ..+....++++......      ...+++|+.|.|.    +++++.+.+++.+.+.... ..|++..|.+++|+++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~------~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~   74 (382)
T PRK06108          6 RALPESGIREVANAGRG------REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYV   74 (382)
T ss_pred             hhCCchHHHHHHHHHhc------cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHH
Confidence            33444556665544331      3578999999976    5778899999999887643 46999999999999999999


Q ss_pred             hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHHhh
Q 014631          100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLEAL  178 (421)
Q Consensus       100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~  178 (421)
                      ++.+|..+++++|++|+|+++++..++..++++||+|++++|+|..+...++..|++++.++.+.+ ++|.+|++++++.
T Consensus        75 ~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~  154 (382)
T PRK06108         75 SRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAA  154 (382)
T ss_pred             HHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHh
Confidence            988888889999999999999999999999999999999999999999999999999999998653 4577999999998


Q ss_pred             hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC-CCCccccccc-CCCCCEEEEccccccc
Q 014631          179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG-STPYVRMGVF-GSTVPVITLGSMSKRW  256 (421)
Q Consensus       179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~s~sK~~  256 (421)
                      ++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.++ +.....+..+ +..+++++++||||.|
T Consensus       155 ~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~  234 (382)
T PRK06108        155 ITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNW  234 (382)
T ss_pred             cCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhc
Confidence            8888899999999999999999999999999999999999999999999876 3222222232 2346799999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+|+||++++        +++++.+..... ...+++.+.|.++..+|.. ...++++.+++++++++.+.+.|+++
T Consensus       235 g~~G~RiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~  305 (382)
T PRK06108        235 AMTGWRLGWLVAP--------PALGQVLEKLIEYNTSCVAQFVQRAAVAALDE-GEDFVAELVARLRRSRDHLVDALRAL  305 (382)
T ss_pred             cCcccceeeeeCC--------HHHHHHHHHHHHhcccCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999985        356676665543 2356788899999888875 35677888999999999999999988


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      +++. +..|++|+|+|++++..     .++.+++..+++++||.+.||..|+.  .+++|+|++.+++++++++++|+++
T Consensus       306 ~~~~-~~~p~~g~~~~~~l~~~-----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  379 (382)
T PRK06108        306 PGVE-VAKPDGAMYAFFRIPGV-----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRF  379 (382)
T ss_pred             CCCc-ccCCCeeEEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHH
Confidence            8888 55788999999998742     14667888888889999999998864  5799999999999999999999988


Q ss_pred             HH
Q 014631          414 CQ  415 (421)
Q Consensus       414 ~~  415 (421)
                      ++
T Consensus       380 l~  381 (382)
T PRK06108        380 LA  381 (382)
T ss_pred             Hh
Confidence            74

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.3e-50  Score=381.12  Aligned_cols=373  Identities=25%  Similarity=0.434  Sum_probs=310.5

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +.+.....++.+......      ...+++|+.|.|.    +++++.+.+++.+.+... ...|.+..|.++||++++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~   82 (391)
T PRK08361         14 INLIQRSKIRELFERASK------MENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEY   82 (391)
T ss_pred             HHhCCccHHHHHHHHHHh------hcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence            434444555555543321      3578999999977    455788999998887653 45788889999999999999


Q ss_pred             HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631           99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus        99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +++.+|.++++++|++|+|+++++..++.+++++||+|++++|+|.++...+...|++++.+++++++++.+|++++++.
T Consensus        83 ~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~  162 (391)
T PRK08361         83 YKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLEL  162 (391)
T ss_pred             HHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHh
Confidence            99888888999999999999999999999999999999999999999999999999999999987766788999999999


Q ss_pred             hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631          179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV  258 (421)
Q Consensus       179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  258 (421)
                      +.++++++++++|+||||.++|.+++++|+++|+++++++|+||+|.++.+.+....++...+ .+++++++||||.|++
T Consensus       163 i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~  241 (391)
T PRK08361        163 ITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSFSKTFAM  241 (391)
T ss_pred             cccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecCchhcCC
Confidence            988899999999999999999999999999999999999999999999887654433443333 2578999999999999


Q ss_pred             CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      +|+|+||++++        +++++.+..... ...+.+.+.|.++..+++... ..++++.++.++++++.+.+.|++++
T Consensus       242 ~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~  313 (391)
T PRK08361        242 TGWRLGFVIAP--------EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMP  313 (391)
T ss_pred             cHhhhhhhccC--------HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999985        346666655443 234677888999988887533 35688889999999999999999988


Q ss_pred             CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      ++. +..|.+|+|+|++++...    .++.+++..+++++||.+.||..|+.  .+++|++++.+++++++++++|++++
T Consensus       314 ~~~-~~~p~g~~~~~~~l~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l  388 (391)
T PRK08361        314 HIK-VFEPKGAFYVFANIDETG----MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKAL  388 (391)
T ss_pred             CCe-ecCCCEEEEEEEECCCCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            887 557889999999997421    14677887777778999999998865  47999999988899999999999988


Q ss_pred             HH
Q 014631          415 QR  416 (421)
Q Consensus       415 ~~  416 (421)
                      ++
T Consensus       389 ~~  390 (391)
T PRK08361        389 EE  390 (391)
T ss_pred             hc
Confidence            65

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=3.8e-51  Score=363.17  Aligned_cols=349  Identities=29%  Similarity=0.482  Sum_probs=297.3

Q ss_pred             ccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHHHHHHHH
Q 014631           49 LGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQAIQVILT  127 (421)
Q Consensus        49 l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~  127 (421)
                      |+.|.|+    +++|+.+.+++++.+.....++|....|+++|++++++.+.+++|...++ ++|++|.|+.+++...+.
T Consensus        36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~  111 (420)
T KOG0257|consen   36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL  111 (420)
T ss_pred             ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence            9999977    79999999999999998777899999999999999999999988876666 469999999999999999


Q ss_pred             HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc------CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          128 VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL------PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       128 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +++++||+|++.+|.|..|....+..|..++.++..      ..+.|.+|.++++..+.++||+|++++||||||.++|.
T Consensus       112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR  191 (420)
T KOG0257|consen  112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR  191 (420)
T ss_pred             HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence            999999999999999999999999999999999987      34678899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      ++|++|+++|++||+++|+||+|..+.+++.....+..+ +..++++.++|+||+|++.|||+||++++        +.+
T Consensus       192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp--------~~L  263 (420)
T KOG0257|consen  192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGP--------KHL  263 (420)
T ss_pred             HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeech--------HHh
Confidence            999999999999999999999999999999755555554 45778999999999999999999999994        245


Q ss_pred             HHHHhhhc-ccccCCchHHHHHHHHHhhccc-------hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631          281 VDSIKGYL-NISSGPATFVQGAVPQIFKNTK-------EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV  352 (421)
Q Consensus       281 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~  352 (421)
                      ........ +.....+++.|.|...++....       ..+..+..+.++++++.+.+.|.++ |+. +..|++++|+|+
T Consensus       264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~-v~~p~gayyl~a  341 (420)
T KOG0257|consen  264 YSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK-VTGPEGAYYLWA  341 (420)
T ss_pred             hhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-cccCCCceEEEE
Confidence            55555543 3344666677777766665322       1344558999999999999999999 999 669999999999


Q ss_pred             ecCccc-------ccCCCChHHHHHHHHhhcCeeEEeCCCCCCC-------CeEEEEecCCHHHHHHHHHHHH
Q 014631          353 KLNLSL-------LEGISDDMEFALQLAKEESVIVLPGMAVGMK-------NWLRITFAIEPSALEEGLGRIK  411 (421)
Q Consensus       353 ~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~-------~~iRi~~~~~~e~l~~~~~~l~  411 (421)
                      +++...       .....++..+..+++++.|+.+.|++.|+.+       +.+|+++..+++.++.+.++|+
T Consensus       342 dfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~  414 (420)
T KOG0257|consen  342 DFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK  414 (420)
T ss_pred             eccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence            998211       1112356778999999999999999999874       3567777777888888888877

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-49  Score=375.60  Aligned_cols=357  Identities=24%  Similarity=0.380  Sum_probs=302.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~a  121 (421)
                      .+++++|+.|.|.    +++++.+.+++.+.+.......|++..|.+++|+++++++.+++|..++ +++|++|+|++++
T Consensus        26 ~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~  101 (389)
T PRK05957         26 NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMA  101 (389)
T ss_pred             CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHH
Confidence            3578999999977    5678899999998876554467999999999999999999998887777 7789999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +..++..++++||+|++++|+|..+...++..|++++.++.+  +++++|+|++++.++++++++++++|+||||.++|.
T Consensus       102 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~  179 (389)
T PRK05957        102 FMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPE  179 (389)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCH
Confidence            999999999999999999999999988888999999998864  457799999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      +++++|+++|+++|+++|+||+|.++.+++....+...+ +...++|+++||||.|+++|+|+||++++        +++
T Consensus       180 ~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~--------~~~  251 (389)
T PRK05957        180 ALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIP--------IHL  251 (389)
T ss_pred             HHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecC--------HHH
Confidence            999999999999999999999999998765432232232 44568999999999999999999999985        357


Q ss_pred             HHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc-cccCCCCceeEEEEecCccc
Q 014631          281 VDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI-TCPRKPEGSMFVMVKLNLSL  358 (421)
Q Consensus       281 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~  358 (421)
                      ++++...... ..+++.+.|.++..+|+. ...++++..+.++++++.+.+.|++++++ . +..|.+|+|+|++++.. 
T Consensus       252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~gg~~~~~~~~~~-  328 (389)
T PRK05957        252 LEAIKKIQDTILICPPVVSQYAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCT-LHPANGAFYCFLKVNTD-  328 (389)
T ss_pred             HHHHHHHHhhcccCCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-ccCCCeeEEEEEeCCCC-
Confidence            7777766542 346677899998888864 34677888888999999999999988774 4 55788899999998642 


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                          .++.+++.++++++||.+.||+.|+.  .+++|+|++ .+++++++++++|.+.++++.+|
T Consensus       329 ----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~~  389 (389)
T PRK05957        329 ----LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQQ  389 (389)
T ss_pred             ----CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhcC
Confidence                25778888888788999999998865  468999998 68999999999999999887553

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=2.9e-49  Score=377.49  Aligned_cols=367  Identities=29%  Similarity=0.528  Sum_probs=301.7

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..+.++++|+.|.|.. ..+++++.+.+++.+.+... ...|++..|.++||+++++|++..+|+++++++|++|+|+++
T Consensus        27 ~~~~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~  104 (398)
T PRK08363         27 KKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTE  104 (398)
T ss_pred             hcCCCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence            3478999999999852 23577899999999888654 347988899999999999999998898999999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      ++.+++.+++++||.|++++|+|.++...+...|.+++.++...++++.+|++++++.+.++++++++++||||||.+++
T Consensus       105 al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  184 (398)
T PRK08363        105 ALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYE  184 (398)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcC
Confidence            99999999999999999999999999999999998888774333456778999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      .+++++|+++|+++|+++|+||+|.++.+.+. ..++..++...++++++||||.|+++|+|+||+++.++....  ..+
T Consensus       185 ~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~--~~l  261 (398)
T PRK08363        185 KKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKL--AEV  261 (398)
T ss_pred             HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHH--HHH
Confidence            99999999999999999999999999887653 233444555567999999999999999999999983221111  122


Q ss_pred             HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      ...+........+++.++|.++..+|.. ...++++.+++++++++.+.+.|.+++++. +..|.+++|+|+.++...  
T Consensus       262 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~~~l~~~~--  337 (398)
T PRK08363        262 REAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPRIEEGP--  337 (398)
T ss_pred             HHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE-ecCCCeEEEEEEEeccCC--
Confidence            2222222222246788899999888864 467888889999999999999999887877 557899999998887421  


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                       ..++.+++.++++++||.+.||..|+.  ++++|+|++.+++++++++++|++++++.
T Consensus       338 -~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~  395 (398)
T PRK08363        338 -WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRER  395 (398)
T ss_pred             -CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence             013567777778899999999998865  47999999988999999999999988764

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.7e-49  Score=376.59  Aligned_cols=356  Identities=23%  Similarity=0.361  Sum_probs=296.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC-CCCC-cEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK-LSPD-DVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~-~~~~-~i~~~~g~~  119 (421)
                      .+..+++|+.|.|.    +++++.+.+++.+.+.......|++ .|.++||+++++|+++.+|+. ++++ +|++|+|++
T Consensus        42 ~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~  116 (410)
T PRK06290         42 PDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSK  116 (410)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHH
Confidence            47789999999976    4567888888888775444456864 899999999999999988887 8886 799999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631          120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF  199 (421)
Q Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~  199 (421)
                      +++..++.+++++||.|++++|+|..+...++..|++++.++++.++++.+|++++++.+.++++++++++||||||.++
T Consensus       117 ~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~  196 (410)
T PRK06290        117 PALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVA  196 (410)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCC
Confidence            99999999999999999999999999999999999999999987777788899999998887899999999999999999


Q ss_pred             CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      |.+++++|+++|++||++||+||+|.++.+++.. .++..+.. .+++|+++||||.|+++|+|+||++++        +
T Consensus       197 s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~-~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~--------~  267 (410)
T PRK06290        197 TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP-LSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN--------E  267 (410)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC-cChhcCCCccccEEEEeechhhcCCchhheEeEEeC--------H
Confidence            9999999999999999999999999998876532 23333332 356799999999999999999999985        3


Q ss_pred             HHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631          279 RIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS  357 (421)
Q Consensus       279 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  357 (421)
                      ++++.+...... ..+++.+.|.++..+|++  ..+.++.+++++++++.+.+.|++. |+. +..|++++|+|++++..
T Consensus       268 ~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~f~l~v~lp~~  343 (410)
T PRK06290        268 LIVKAFATVKDNNDSGQFIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFK-AEMPGGTFYLYVKAPKG  343 (410)
T ss_pred             HHHHHHHHHHhccccCCcHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCeeeEEEEECCCc
Confidence            567777665432 345566888888888875  3567888999999999999999987 777 55788999999998753


Q ss_pred             cccC--CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631          358 LLEG--ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       358 ~~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ...+  ..++.+++..|+++.++.+.||..|+  +++||+++   .++|+-++++++|.+.+..+
T Consensus       344 ~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~  406 (410)
T PRK06290        344 TKSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV  406 (410)
T ss_pred             cccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence            2100  02467888888887788888987664  79999998   47789999999999988764

>PLN02231 alanine transaminase

Probab=100.00  E-value=9.1e-50  Score=387.95  Aligned_cols=381  Identities=20%  Similarity=0.335  Sum_probs=299.6

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc--C-CCCCCCCCCCCHHHHHHHH
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS--A-EFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~l~~~ia   96 (421)
                      .+.++.-+|+++...+       .+++|+|+.+.+.    +|.  .+++...+.+..  + ....|+++.|++++|++|+
T Consensus       112 ~~~~~~~~r~v~~~~~-------~p~~i~~~~~~~~----fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA  178 (534)
T PLN02231        112 GQQPITFFREVLALCD-------HPSLLDKSETHGL----FSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIA  178 (534)
T ss_pred             CCCccHHHHHHHHhcc-------CCccCCCCCcccc----CCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHH
Confidence            3445566666665443       4688888865433    333  455555556654  2 3567999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +|+.+++|.++++++|++|+|+++++..++++++ .+||.|+++.|+|+.|...+...|++++.++++.+++|++|++++
T Consensus       179 ~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~L  258 (534)
T PLN02231        179 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISEL  258 (534)
T ss_pred             HHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHH
Confidence            9999988999999999999999999999999998 489999999999999999999999999999998777899999999


Q ss_pred             Hhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC-CCCcccccccC-------
Q 014631          176 EALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG-STPYVRMGVFG-------  241 (421)
Q Consensus       176 ~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~-------  241 (421)
                      ++.+++      ++++++++||+||||.+++.+++++|+++|++||++||+||+|.++.|. +..+.++..+.       
T Consensus       259 e~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~  338 (534)
T PLN02231        259 KKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGE  338 (534)
T ss_pred             HHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhcccc
Confidence            998754      5788999999999999999999999999999999999999999999985 34444443331       


Q ss_pred             CCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc-----c-hh--
Q 014631          242 STVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT-----K-ED--  312 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~-~~--  312 (421)
                      ...++++++||||.| +++|+|+||+++....     +++++.+........+++...|.++..+++..     . +.  
T Consensus       339 ~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~-----~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~  413 (534)
T PLN02231        339 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFT-----SDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYM  413 (534)
T ss_pred             CCceEEEEeccCcccccCCccceEEEEEecCC-----HHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHH
Confidence            123689999999975 7899999999874211     35667666554444567778888888888531     1 12  


Q ss_pred             -HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecC--cccc-----cCCCChHHHHHHHHhhcCeeEEeCC
Q 014631          313 -FFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLN--LSLL-----EGISDDMEFALQLAKEESVIVLPGM  384 (421)
Q Consensus       313 -~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~ll~~~gv~v~~g~  384 (421)
                       +.+++++.++++++.+.+.|++++|+. +..|++|+|+|+++.  ....     .+...+..++.+++++.||+++||+
T Consensus       414 ~~~~~i~~~~~~r~~~l~~~L~~~~gi~-~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs  492 (534)
T PLN02231        414 AEKDGILSSLARRAKTLEDALNSLEGVT-CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGS  492 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCc
Confidence             233457889999999999999988998 558999999996553  2110     0011244566778888999999999


Q ss_pred             CCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          385 AVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       385 ~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .|+.   ..++|+++..+++++++++++|.++++++-+
T Consensus       493 ~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~~  530 (534)
T PLN02231        493 GFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFMD  530 (534)
T ss_pred             ccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9975   3469999999999999999999999887654

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.1e-49  Score=376.56  Aligned_cols=384  Identities=27%  Similarity=0.479  Sum_probs=322.0

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ..+++.+++.++++....++..  ..+.++++|+.|.|.    +++++.+.+++.+.+.... ..|++..|..+||++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia   78 (393)
T PRK05764          6 KRVSRVTPSATLAVTAKAKELK--AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPELREAIA   78 (393)
T ss_pred             hhhhhcCchHHHHHHHHHHHHH--hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHHHHHHHH
Confidence            4566777888888777665432  236789999999976    4667899999988887643 46999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      +++.+.+|.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.+++.++.++++++.+|+++++
T Consensus        79 ~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  158 (393)
T PRK05764         79 AKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLE  158 (393)
T ss_pred             HHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHH
Confidence            99998888788899999999999999999999999999999999999999999999999999999876667889999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc--CCCCCEEEEccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF--GSTVPVITLGSMSK  254 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK  254 (421)
                      +.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..+  +..+++++++||||
T Consensus       159 ~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK  238 (393)
T PRK05764        159 AAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSK  238 (393)
T ss_pred             HhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcc
Confidence            9988888999999999999999999999999999999999999999999988766543344443  33457899999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .++++|+|+||++++        +++.+.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|+
T Consensus       239 ~~~~~G~RiG~i~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~  309 (393)
T PRK05764        239 AYAMTGWRLGYAAGP--------KELIKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLN  309 (393)
T ss_pred             cccCccceeEEEecC--------HHHHHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999975        356777766543 3457788999998888863 457788888999999999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      +++++. +..|.+++|+|+.++........++.++...+++++||.+.||..|+..+++|+|++.+++++++++++|.++
T Consensus       310 ~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~  388 (393)
T PRK05764        310 EIPGLE-CPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERF  388 (393)
T ss_pred             hCCCCc-ccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHH
Confidence            988888 5578889999998875321101124677777878889999999988778999999998999999999999999


Q ss_pred             HHHh
Q 014631          414 CQRH  417 (421)
Q Consensus       414 ~~~~  417 (421)
                      ++++
T Consensus       389 ~~~~  392 (393)
T PRK05764        389 LESL  392 (393)
T ss_pred             HHhh
Confidence            8764

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=1.4e-49  Score=380.53  Aligned_cols=359  Identities=21%  Similarity=0.279  Sum_probs=289.7

Q ss_pred             HHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 014631           29 SALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIADYLNSELP  104 (421)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~l~~~ia~~l~~~~~  104 (421)
                      .+..+.++...+..++++++|+.|+|.    +++++.+.+++.+.+...    ....|++..|.++||+++++|+.+.+|
T Consensus        19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g   94 (409)
T PRK07590         19 EIARRVNAFREANPEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARG   94 (409)
T ss_pred             HHHHHHHHHhhhcCCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcC
Confidence            344444444333346789999999977    467788899998887652    345899999999999999999988889


Q ss_pred             CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCce-----------eEeeeccCCCCccCCHH
Q 014631          105 CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE-----------IRHFDLLPEKGWEVDLD  173 (421)
Q Consensus       105 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~e  173 (421)
                      +++++++|++|+|+++++.++. .++.+||+|++++|+|..+...++..|.+           ++.++++.++++.+|.+
T Consensus        95 ~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~  173 (409)
T PRK07590         95 CDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP  173 (409)
T ss_pred             CcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc
Confidence            8999999999999999999875 45589999999999999999999999986           88888765555555533


Q ss_pred             HHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccc
Q 014631          174 GLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSM  252 (421)
Q Consensus       174 ~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~  252 (421)
                      +      ++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++..++. .+++|+++||
T Consensus       174 ~------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf  247 (409)
T PRK07590        174 E------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSF  247 (409)
T ss_pred             c------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecC
Confidence            2      57889999999999999999999999999999999999999999998876643344555543 3468999999


Q ss_pred             ccccCCCCceEEEEEeeCCCcchhHHHHHHH------------Hhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDS------------IKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      ||.|+++|+|+||+++++        ++++.            +.... ....+++.+.|.++..++......++++.++
T Consensus       248 SK~~~~pGlRiG~~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~  319 (409)
T PRK07590        248 SKTAGFTGTRCAYTVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELID  319 (409)
T ss_pred             ccccCCcCceeEEEEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHH
Confidence            999999999999999963        34441            11111 1223578889999888886434578888899


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA  397 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~  397 (421)
                      .++++++.+.+.|+++ ++. +..|.+++|+|++++..     .++.+++..+++++||.+.||..|+.  .+++|||+.
T Consensus       320 ~~~~~r~~l~~~L~~~-~~~-~~~~~g~~f~wi~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~  392 (409)
T PRK07590        320 YYMENAKIIREGLESA-GFE-VYGGVNAPYIWVKTPDG-----MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF  392 (409)
T ss_pred             HHHHHHHHHHHHHHhc-CCc-eecCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc
Confidence            9999999999999987 777 54678999999999742     14567888887888999999998865  469999987


Q ss_pred             CCHHHHHHHHHHHHHH
Q 014631          398 IEPSALEEGLGRIKAF  413 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~  413 (421)
                      .+++++++++++|.++
T Consensus       393 ~~~~~l~~~l~rl~~~  408 (409)
T PRK07590        393 GSRENVLEAMERIKKA  408 (409)
T ss_pred             CCHHHHHHHHHHHHhh
Confidence            8899999999999875

>PRK07324 transaminase; Validated

Probab=100.00  E-value=7.2e-50  Score=377.37  Aligned_cols=347  Identities=23%  Similarity=0.377  Sum_probs=298.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .+..+++|+.|+|.    ++.|+.+ +++.+.+.... ..|++..|.++||++++++++     .+++++|++|+|++++
T Consensus        24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a   92 (373)
T PRK07324         24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKK-LTYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA   92 (373)
T ss_pred             ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCC-ccCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence            47899999999976    4566667 78877777644 489999999999999999985     3678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +.+++.+++++||+|+++.|+|..+...++..|.+++.++++.+++|.+|++++++.+.++++++++++|+||||.+++.
T Consensus        93 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~  172 (373)
T PRK07324         93 NFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDR  172 (373)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999998877778899999999888889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|+++|++||+++|+||+|.++.+++. ..++...  .+++|+++||||.|+++|+|+||++++        ++++
T Consensus       173 ~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~--------~~li  241 (373)
T PRK07324        173 AYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAAN--------EEVI  241 (373)
T ss_pred             HHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecC--------HHHH
Confidence            9999999999999999999999999887643 2233222  356899999999999999999999985        3577


Q ss_pred             HHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          282 DSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       282 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      +.+...... +.+++.+.|.++..+++. .+.++++.++.++++++.+.+.|++.+++. +..|.+|++.|+.++..   
T Consensus       242 ~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~gg~~~~i~~~~~---  316 (373)
T PRK07324        242 DILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKPKAVSTSFVKLDVD---  316 (373)
T ss_pred             HHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECCCceEEEEEEeCCC---
Confidence            777776543 346777888888888863 456778888899999999999999877777 44889899989888753   


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                        .++.+++.++++++||.+.||..|+.++++|+|++.+++.+++++++|.++++++
T Consensus       317 --~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~  371 (373)
T PRK07324        317 --MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF  371 (373)
T ss_pred             --CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence              2577888888888999999999998889999999988999999999999999765

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=3.3e-49  Score=375.85  Aligned_cols=372  Identities=24%  Similarity=0.362  Sum_probs=304.6

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +..++...+..+....+       +..+++|+.|.|.    .+.|+.+.+++.+.+... ...|++..|.+++|++++++
T Consensus         8 ~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~   75 (387)
T PRK08912          8 FADLPTTIFEVMSQLAR-------EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAH   75 (387)
T ss_pred             HhhCCCCHHHHHHHHHh-------hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence            34444455555444333       4678999999987    345677888887776543 45799999999999999999


Q ss_pred             HhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           99 LNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        99 l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      +++.+|+.++++ +|++|+|+++++..++..++++||+|++++|+|..+...++..|++++.+++++ +++++|++++++
T Consensus        76 ~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~  154 (387)
T PRK08912         76 YARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAA  154 (387)
T ss_pred             HHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHH
Confidence            998888888998 999999999999999999999999999999999999999999999999998753 357899999999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~  256 (421)
                      .+.++++++++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++....++..+.. .+++++++||||.|
T Consensus       155 ~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~  234 (387)
T PRK08912        155 AFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIF  234 (387)
T ss_pred             HhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhc
Confidence            98888899999999999999999999999999999999999999999998887644444444432 46789999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+|+||++++        +++++.+...... ..+.++..|.++..++.. .+.++++.+++++++++.+.+.|++.
T Consensus       235 g~~GlRiG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~  305 (387)
T PRK08912        235 SLTGWKVGFVCAA--------PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRI  305 (387)
T ss_pred             cCcCceeEEEecC--------HHHHHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999985        3566766655432 235566678887777753 35678888999999999999999987


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIK  411 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~  411 (421)
                       |+. +..|.+++|+|+.++....  ..++.+++..+++++||.+.||..|+.    .+++|++++.+++++++++++|.
T Consensus       306 -g~~-~~~~~g~~~l~~~l~~~~~--~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~  381 (387)
T PRK08912        306 -GFP-VLPSQGTYFLTVDLAPLGL--AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLA  381 (387)
T ss_pred             -CCc-ccCCCcceEEEecccccCC--CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHH
Confidence             777 5578889999998864210  124677888887888999999998843    47999999988999999999999


Q ss_pred             HHHHH
Q 014631          412 AFCQR  416 (421)
Q Consensus       412 ~~~~~  416 (421)
                      +++++
T Consensus       382 ~~l~~  386 (387)
T PRK08912        382 AARRR  386 (387)
T ss_pred             HHHhc
Confidence            88753

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.8e-49  Score=376.92  Aligned_cols=365  Identities=22%  Similarity=0.390  Sum_probs=299.3

Q ss_pred             hhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhh
Q 014631           22 TATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNS  101 (421)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~  101 (421)
                      ++.+.++.+...+.+. ...++.++++|+.|.|.    +++++.+.+++.+.+..  ...|++..|.+++|+++|+|+++
T Consensus         7 ~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~   79 (393)
T TIGR03538         7 LQPYPFEKLAALLAGV-TPPASKPPIALSIGEPK----HPTPAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLER   79 (393)
T ss_pred             CCccHHHHHHHHHHhh-hhhcCCCeEEecCCCCC----CCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHH
Confidence            3344555555554332 12247899999999977    46788999999987653  46899999999999999999999


Q ss_pred             hCCCC--CCCC-cEEEcCCHHHHHHHHHHHhcCCCCe--EEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631          102 ELPCK--LSPD-DVYLTAGCKQAIQVILTVLARPGAN--ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus       102 ~~~~~--~~~~-~i~~~~g~~~al~~~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      .+|++  ++++ +|++|+|+++++..++++++++||.  |++++|+|..+...++..|++++.++++.+++|.+|+++++
T Consensus        80 ~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  159 (393)
T TIGR03538        80 RFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVP  159 (393)
T ss_pred             hhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHH
Confidence            88775  6775 7999999999999999999999986  99999999999999999999999999876777889999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Ccccc----ccc--CCCCCEEEE
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRM----GVF--GSTVPVITL  249 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~----~~~--~~~~~~i~~  249 (421)
                      +.+.++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++. ...+.    ...  +..++++++
T Consensus       160 ~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i  239 (393)
T TIGR03538       160 ESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVF  239 (393)
T ss_pred             HHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEE
Confidence            88877889999999999999999999999999999999999999999999887642 22111    111  134689999


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC  328 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  328 (421)
                      +||||.|+++|+|+||++++        +++++.+..... ...+.+.+.|.++...+..  +.++++.++.++++++.+
T Consensus       240 ~S~SK~~~~~GlRvG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~  309 (393)
T TIGR03538       240 HSLSKRSNLPGLRSGFVAGD--------AEILKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAV  309 (393)
T ss_pred             ecchhhcCCcccceEEEecC--------HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHH
Confidence            99999989999999999985        356777766553 2346778888888777753  567888899999999999


Q ss_pred             HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--------CCeEEEEecCCH
Q 014631          329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--------KNWLRITFAIEP  400 (421)
Q Consensus       329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~iRi~~~~~~  400 (421)
                      .+.|+++  +. +..|.+|+|+|++++.       ++.+++..+++++||.+.||+.|+.        .+++||+++.++
T Consensus       310 ~~~L~~~--~~-~~~p~gg~f~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~  379 (393)
T TIGR03538       310 LEILGQV--LD-LELPDAGFYLWPKVPG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPL  379 (393)
T ss_pred             HHHHHhh--Cc-ccCCCeeEEEEEECCC-------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCH
Confidence            9999875  34 3478999999999971       3567887877888999999998852        368999999889


Q ss_pred             HHHHHHHHHHHHH
Q 014631          401 SALEEGLGRIKAF  413 (421)
Q Consensus       401 e~l~~~~~~l~~~  413 (421)
                      +++++++++|+++
T Consensus       380 ~~l~~~l~~l~~~  392 (393)
T TIGR03538       380 EECVEAAERIRSF  392 (393)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999875

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=8.9e-49  Score=372.24  Aligned_cols=372  Identities=24%  Similarity=0.462  Sum_probs=309.2

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      .++......++++...+..      .+.+++|+.|.|.    ++.++.+.+++.+.+... ...|++..|.++||+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~   76 (387)
T PRK07683          8 RVKDIQISGIRQFSNMVQN------YDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACN   76 (387)
T ss_pred             HHHhCCccHHHHHHHHHHh------cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence            3444555666676665432      4678999999976    466788999999988753 4589988999999999999


Q ss_pred             HHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           98 YLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        98 ~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      ++++.+|+.++++ +|++|+|+++++.+++++++++||+|+++.|+|..+...++..|+++++++.+ ++++.+|.++++
T Consensus        77 ~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~  155 (387)
T PRK07683         77 FVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRLTAEALE  155 (387)
T ss_pred             HHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCCCHHHHH
Confidence            9998888888898 99999999999999999999999999999999999999999999999999875 356778899999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKR  255 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~  255 (421)
                      +.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+.+.. .++..+ +..+++++++||||.
T Consensus       156 ~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~vi~~~s~SK~  234 (387)
T PRK07683        156 NAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH-TSIAHFPEMREKTIVINGLSKS  234 (387)
T ss_pred             HhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc-CChhhccCCcCCeEEEeecccc
Confidence            988888899999999999999999999999999999999999999999998876533 344444 334579999999999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |++||+|+||++++        +++++.+...... ..+++.+.|.++..+|.. ...+.++.+++++++++.+.+.|++
T Consensus       235 ~~~pGlRiG~i~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~  305 (387)
T PRK07683        235 HSMTGWRIGFLFAP--------SYLAKHILKVHQYNVTCASSISQYAALEALTA-GKDDAKMMRHQYKKRRDYVYNRLIS  305 (387)
T ss_pred             ccCccceeEEEEcC--------HHHHHHHHHHHHhccCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999986        3566766654332 345677889999888875 3456778888999999999999998


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                      . ++. +..|++++|+|+.++...    .++.+++..+++++||.+.||..|+.  .+++||+++.+++++.+++++|.+
T Consensus       306 ~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~  379 (387)
T PRK07683        306 M-GLD-VEKPTGAFYLFPSIGHFT----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEA  379 (387)
T ss_pred             c-CCc-ccCCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence            7 776 557889999998886421    14667777778889999999998865  479999999889999999999999


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      ++.+-
T Consensus       380 ~l~~~  384 (387)
T PRK07683        380 FLQQK  384 (387)
T ss_pred             HHHhh
Confidence            88653

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=3.9e-49  Score=374.34  Aligned_cols=349  Identities=22%  Similarity=0.418  Sum_probs=293.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a  121 (421)
                      ..++|+|+.|.|.    +++++.+.+++.+.+... ...|++..|++++|+++++++++.+|...++ ++|++|+|++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a  102 (384)
T PRK12414         28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG  102 (384)
T ss_pred             hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence            4678999999976    467888999998887654 3589999999999999999999988877665 689999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +..++++++++||+|++++|+|..+...++..|.+++.++++. +++.+|++.+++.++++++++++++||||||.+++.
T Consensus       103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~  181 (384)
T PRK12414        103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA  181 (384)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999998754 357899999999988889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      +++++|+++|++||+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||++++        +++
T Consensus       182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~--------~~l  253 (384)
T PRK12414        182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP--------AEL  253 (384)
T ss_pred             HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC--------HHH
Confidence            99999999999999999999999998887654434444432 457999999999999999999999986        356


Q ss_pred             HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      ++.+..... ...+++.+.|.++..+|+..  .+..+.++.++++++.+.+.|++. |+. +..|.+|+|+|++++... 
T Consensus       254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~~~-  328 (384)
T PRK12414        254 MDEIRKVHQFMVFSADTPMQHAFAEALAEP--ASYLGLGAFYQRKRDLLARELAGS-RFE-LLPSEGSFFMLARFRHFS-  328 (384)
T ss_pred             HHHHHHHHhheecCCCcHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCcceEEEEcccccC-
Confidence            677766553 23467889999999988752  234457788999999999999987 777 557889999998886321 


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                       + ..+.+++.++++++||.+.||..|+.    .+++||+++.+++++++++++|.+
T Consensus       329 -~-~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~  383 (384)
T PRK12414        329 -D-ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS  383 (384)
T ss_pred             -C-CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence             0 13567777788889999999998853    468999999889999999999865

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1e-48  Score=374.39  Aligned_cols=379  Identities=26%  Similarity=0.454  Sum_probs=309.6

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +.....+.++.+........  ..+..+++|+.|.|.    ++.++.+.+++.+...  ....|++..|.+++|++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ia~~   78 (397)
T PRK07568          7 VLNMPASPIRKLVPYADEAK--KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELREAFAKY   78 (397)
T ss_pred             hhhCCcchHHHHHHHHHHHH--hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHHHHHH
Confidence            33444566777665443211  125679999999976    4567888888877653  245799999999999999999


Q ss_pred             HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC-CHHHHHh
Q 014631           99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV-DLDGLEA  177 (421)
Q Consensus        99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~-d~e~l~~  177 (421)
                      +. .+|.++++++|++|+|+++++..++..++++||+|++++|+|..+...++..|.+++.++.+.++++.. +++++++
T Consensus        79 ~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~  157 (397)
T PRK07568         79 YK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEK  157 (397)
T ss_pred             HH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHH
Confidence            98 467788999999999999999999999999999999999999999888899999999998865555543 6799999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~  256 (421)
                      .++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..++. .+++++++||||.|
T Consensus       158 ~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~  237 (397)
T PRK07568        158 LITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRY  237 (397)
T ss_pred             hcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhc
Confidence            88888999999999999999999999999999999999999999999999887654444444443 56899999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      +++|+|+||+++++       +++++.+........+++.+.|.++..+++. .+.++++.++.++++++.+.+.|++++
T Consensus       238 ~~~G~R~G~~~~~~-------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (397)
T PRK07568        238 SACGARIGCLISKN-------KELIAAAMKLCQARLSPPTLEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIP  309 (397)
T ss_pred             cCCCcceEEEecCC-------HHHHHHHHHHhhccCCCCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999853       2455655444332346788899999999974 357888889999999999999999887


Q ss_pred             CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhh-----cCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE-----ESVIVLPGMAVGM-----KNWLRITFAIEPSALEEG  406 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~  406 (421)
                      ++. +..|.+|+|+|++++..      ++.++..+++++     +||.+.||..|+.     ++++|++++.++++++++
T Consensus       310 ~~~-~~~p~g~~~~~~~l~~~------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~  382 (397)
T PRK07568        310 GVV-CEKPKGAFYIIAKLPVD------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRA  382 (397)
T ss_pred             Cce-ecCCCcceEEEEecCCC------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHH
Confidence            777 55789999999998742      456777777654     6999999998832     369999999888999999


Q ss_pred             HHHHHHHHHHhhhcC
Q 014631          407 LGRIKAFCQRHAKQQ  421 (421)
Q Consensus       407 ~~~l~~~~~~~~~~~  421 (421)
                      +++|.++++++.+++
T Consensus       383 ~~~l~~~l~~~~~~~  397 (397)
T PRK07568        383 MEILKEALEKYNKRK  397 (397)
T ss_pred             HHHHHHHHHHhhccC
Confidence            999999999887764

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=1.3e-48  Score=371.59  Aligned_cols=373  Identities=25%  Similarity=0.451  Sum_probs=304.0

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +..+....++.+.....      ..+++++|+.|.|.    +++++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus        11 ~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~   79 (391)
T PRK07309         11 LDKIEVSLIRQFDQSIS------DIPGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADF   79 (391)
T ss_pred             hhhcCccHHHHHHHHHH------hcCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence            44444445555554332      13679999999976    455788888988887643 34798999999999999999


Q ss_pred             HhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           99 LNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        99 l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      ++..+|+.+++ ++|++|+|+++++++++.+++++||+|++++|+|.++...++..|.+++.++.+ ++++.+|++.+++
T Consensus        80 ~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~  158 (391)
T PRK07309         80 VKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEMLEK  158 (391)
T ss_pred             HHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHHHHH
Confidence            99888877765 789999999999999999999999999999999999999999999999998864 3457799999998


Q ss_pred             hhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          178 LADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       178 ~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                      .++.   +++++++++|+||||.+++.+++++|+++|++||+++|+|++|+++.+.+....++..+. .+++++++||||
T Consensus       159 ~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK  237 (391)
T PRK07309        159 AILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSK  237 (391)
T ss_pred             HhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChh
Confidence            8753   578999999999999999999999999999999999999999999988665444444433 357999999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .|+++|+|+||++++        +++++.+..... ...+++.+.|.++..+++.. ..+....++.++++++.+.+.|+
T Consensus       238 ~~g~~GlRvG~~v~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~  308 (391)
T PRK07309        238 SHAMTGWRIGLIFAP--------AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMT  308 (391)
T ss_pred             hccCccceeEEEEeC--------HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999986        357777765543 23467888999999998753 23345667788899999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIK  411 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~  411 (421)
                      +. ++. +..|++|+|+|++++...   ..++.+++..+++++||.+.||..|+.  ++++|++++.+.+++++++++|+
T Consensus       309 ~~-~~~-~~~p~gg~~~~~~l~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~  383 (391)
T PRK07309        309 DL-GFK-IIKPDGAFYIFAKIPAGY---NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLK  383 (391)
T ss_pred             HC-CCe-ecCCCeeEEEEEECCCCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHH
Confidence            87 777 557889999999887431   013567777788889999999998865  57999999988899999999999


Q ss_pred             HHHHHhh
Q 014631          412 AFCQRHA  418 (421)
Q Consensus       412 ~~~~~~~  418 (421)
                      ++++++.
T Consensus       384 ~~~~~~~  390 (391)
T PRK07309        384 EYMEEHA  390 (391)
T ss_pred             HHHHhhc
Confidence            9997764

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=6e-49  Score=345.75  Aligned_cols=357  Identities=25%  Similarity=0.422  Sum_probs=310.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..+++.+-+.+    ..++.||.+++|+++.++.+.. +|+  .+-.++-+++++|..++++...+++.|++++|...++
T Consensus        24 ~~DvlPmWVAD----MDf~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi   96 (388)
T COG1168          24 NEDVLPMWVAD----MDFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI   96 (388)
T ss_pred             CCCcceeeeec----ccCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence            46777777776    4489999999999999998643 775  4557899999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC-CCCccCCHHHHHhhhccC-ceEEEEeCCCCCcccccC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP-EKGWEVDLDGLEALADEN-TVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~~~~~-~~~i~~~~p~nptG~~~~  200 (421)
                      ..+++.+.++||.|++..|.|+++....+..|.++...|+.. +..|.+|+++||+++.+. .+..++||||||||.+++
T Consensus        97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt  176 (388)
T COG1168          97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT  176 (388)
T ss_pred             HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence            999999999999999999999999999999999999999864 445889999999987654 588999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC--CCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST--VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      .++|.+|.++|.+||++||+||+|+++.+.|+...++..++..  ++.+.+.|.||+|..+|+.+++++.+++...   .
T Consensus       177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr---~  253 (388)
T COG1168         177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELR---A  253 (388)
T ss_pred             HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHH---H
Confidence            9999999999999999999999999999999777777666553  7889999999999999999999999864311   1


Q ss_pred             HHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCcc
Q 014631          279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLS  357 (421)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~  357 (421)
                      .+.+++..  ....++|.++..|..++.+. .+.|+++..++++.+++++.+.+.+ +|++. +..|++++..|+++...
T Consensus       254 ~~~~~l~~--~~~~~~n~lg~~A~~aAY~~-G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~gTYL~WLD~r~l  329 (388)
T COG1168         254 KFLKRLKR--NGLHGPSALGIIATEAAYNQ-GEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQGTYLAWLDCREL  329 (388)
T ss_pred             HHHHHHHH--hcCCCCchHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCCCceeeeeecccc
Confidence            22333332  23458999999999999985 6799999999999999999999996 69999 66999999999999875


Q ss_pred             cccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          358 LLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       358 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ..    ++.+....++.+.+|.+.+|..||.  .+++|++++++++-+++++++|..++++.
T Consensus       330 ~l----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~~  387 (388)
T COG1168         330 GL----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKKR  387 (388)
T ss_pred             CC----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence            43    4567788899999999999999987  47899999999999999999999888654

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=4.9e-49  Score=374.12  Aligned_cols=350  Identities=21%  Similarity=0.346  Sum_probs=297.4

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a  121 (421)
                      +.++|+|+.|.|+    ++.++.+.+++.+.+... ...|++..|.+++|+++++++++.+|...+++ +|++|+|++++
T Consensus        29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a  103 (386)
T PRK09082         29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA  103 (386)
T ss_pred             hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence            4678999999876    456788899998887653 35799899999999999999998888777775 79999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +..++.+++++||+|++++|+|.++...++..|.+++.++++. +++.+|++++++.++++++++++++|+||||.+++.
T Consensus       104 l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~  182 (386)
T PRK09082        104 LFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSA  182 (386)
T ss_pred             HHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999999854 357899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      +++++|+++|++||+++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||++++        +++
T Consensus       183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~--------~~l  254 (386)
T PRK09082        183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP--------AAL  254 (386)
T ss_pred             HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC--------HHH
Confidence            99999999999999999999999999887654444444433 468999999999999999999999985        357


Q ss_pred             HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      ++.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|++. ++. +..+++|+|+|++++..  
T Consensus       255 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~g~~~~~~~~~~~--  329 (386)
T PRK09082        255 SAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFK-LLPCEGTYFQLVDYSAI--  329 (386)
T ss_pred             HHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCeeEEEEEecccc--
Confidence            777766643 3456788999998888863 45778888899999999999999986 777 55788999999998741  


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                      ++ .++.+++.++++++||.+.||+.|+.    .+++|+|++.+++++++++++|++
T Consensus       330 ~~-~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~  385 (386)
T PRK09082        330 SD-LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ  385 (386)
T ss_pred             CC-CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence            01 24678888888899999999998742    468999999889999999999875

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=1.9e-48  Score=370.75  Aligned_cols=371  Identities=24%  Similarity=0.402  Sum_probs=305.9

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      ++.++...++++.....       ..++++|+.|.|..    +.++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~   73 (387)
T PRK07777          6 LRPFGTTIFAEMSALAV-------RTGAVNLGQGFPDE----DGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQ   73 (387)
T ss_pred             hhhcCccHHHHHHHHHh-------hCCeEEccCCCCCC----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            44555666777776654       45889999999873    34566778877777653 35799889999999999999


Q ss_pred             HhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHH
Q 014631           99 LNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLE  176 (421)
Q Consensus        99 l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~  176 (421)
                      +.+.+|...+++ +|++|+|+++++.+++..++++||+|+++.|+|.++...+...|.+++.++.+++ +++.+|+++++
T Consensus        74 ~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~  153 (387)
T PRK07777         74 RRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALR  153 (387)
T ss_pred             HHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHH
Confidence            998888887776 7999999999999999999999999999999999999999999999999988665 36789999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKR  255 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~  255 (421)
                      +.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+.+....++..++. .+++++++||||.
T Consensus       154 ~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~  233 (387)
T PRK07777        154 AAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKT  233 (387)
T ss_pred             HhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhh
Confidence            988888999999999999999999999999999999999999999999998886654444444432 4578999999999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |+++|+|+||++++        +++++.+..... ...+.+.+.|.++..++.. .+.+.++.++.++++++.+.+.|++
T Consensus       234 ~g~~GlRiG~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~  304 (387)
T PRK07777        234 FNVTGWKIGWACGP--------APLIAAVRAAKQYLTYVGGAPFQPAVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAE  304 (387)
T ss_pred             ccCcCceeEEEecC--------HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999985        356666665543 2335667778888888864 3577888889999999999999998


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-----KNWLRITFAIEPSALEEGLGR  409 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~~~~  409 (421)
                      + ++. +..|++++|+|++++...   ..++.+++..+++++||.|.||..|+.     .+++|++++.+++++++++++
T Consensus       305 ~-~~~-~~~~~g~~~~~~~~~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~  379 (387)
T PRK07777        305 A-GFE-VHDSAGTYFLCADPRPLG---YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRR  379 (387)
T ss_pred             C-CCC-ccCCCcceEEEecccccC---CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHH
Confidence            7 777 557888999998875311   124678888887888999999998753     358999999889999999999


Q ss_pred             HHHHHH
Q 014631          410 IKAFCQ  415 (421)
Q Consensus       410 l~~~~~  415 (421)
                      |.++..
T Consensus       380 l~~~~~  385 (387)
T PRK07777        380 LRALRG  385 (387)
T ss_pred             HHHHhc
Confidence            988754

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=2.5e-48  Score=369.75  Aligned_cols=374  Identities=24%  Similarity=0.325  Sum_probs=308.0

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +.++.+..++.+...+...-  ..+.+.++|+.|.|.    .++++.+.+++.+.+.......|++..|.++||++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~   79 (386)
T PRK07550          6 IAALFPPPIPEVRAWLAGYD--GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAH   79 (386)
T ss_pred             hhhcCChHHHHHHHHHHHHh--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHH
Confidence            33344556677776554322  236789999999976    356788889888877554456798889999999999999


Q ss_pred             HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631           99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus        99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +++.+|...++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.++++++.+|++++++.
T Consensus        80 ~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~  159 (386)
T PRK07550         80 YSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEAL  159 (386)
T ss_pred             HHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHH
Confidence            99988888999999999999999999999999999999999999999999999999999999987666778899999999


Q ss_pred             hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccC
Q 014631          179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWI  257 (421)
Q Consensus       179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~  257 (421)
                      ++++++++++++|+||||.++|.+++++|+++|++||++||+||+|+++.+++....++... +..++++++.||||.|+
T Consensus       160 ~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g  239 (386)
T PRK07550        160 ITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA  239 (386)
T ss_pred             hcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence            98889999999999999999999999999999999999999999999986543322222222 23457899999999999


Q ss_pred             CCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      ++|+|+||++++        +++++.+..... ...+++.+.|.++..+++. .+.+.++.++.++++++.+.+.|.+++
T Consensus       240 ~~G~RiG~i~~~--------~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~  310 (386)
T PRK07550        240 LTGHRVGAVVAS--------PARIAEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFARLP  310 (386)
T ss_pred             CcccceEeeecC--------HHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999985        246666665543 3456788899999888864 457778888899999999999999876


Q ss_pred             CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLGRIKAF  413 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~~l~~~  413 (421)
                      ++. + .+.+++|+|+.++...    .++.+++..+++++||.+.||..|+.  .+++|++++ .+++++++++++|.++
T Consensus       311 ~~~-~-~~~g~~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        311 GWE-L-LASGAYFAYVRHPFPD----RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF  384 (386)
T ss_pred             Cce-e-CCCceEEEEecCCCCC----CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence            665 3 4778999999986411    25778888888889999999998864  579999999 5789999999999875

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=8.5e-49  Score=378.32  Aligned_cols=361  Identities=21%  Similarity=0.368  Sum_probs=290.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHhhhCCC--CCCC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-----------AEFDCYSPSVGILPARRAIADYLNSELPC--KLSP  109 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~--~~~~  109 (421)
                      ...+|+|+.+.+..     ..+.+.+.+.+....           .....|++..|.++||+++|+|+++.++.  ++++
T Consensus        37 p~g~i~L~~~En~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~  111 (468)
T PLN02450         37 PSGIIQMGLAENQL-----SFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP  111 (468)
T ss_pred             CCeeEEeehhHhHh-----hHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence            44789999998542     225555555543220           12345888899999999999999987774  4689


Q ss_pred             CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631          110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------N  182 (421)
Q Consensus       110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~  182 (421)
                      ++|++|+|+++++..++.++++|||.|++++|+|..+...+. ..|++++.++.+.++++.+|++++++.+.+      +
T Consensus       112 ~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~  191 (468)
T PLN02450        112 NKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLK  191 (468)
T ss_pred             HHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999987777 589999999987677888999999887743      6


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc---------CCCCCEEEEcccc
Q 014631          183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF---------GSTVPVITLGSMS  253 (421)
Q Consensus       183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~s~s  253 (421)
                      ++++++++||||||.++|.+++++|+++|++||++||+||+|+++.|++..+.++...         +..+++++++|||
T Consensus       192 ~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S  271 (468)
T PLN02450        192 VKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS  271 (468)
T ss_pred             eeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence            7899999999999999999999999999999999999999999988876544332211         2356899999999


Q ss_pred             cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHH
Q 014631          254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       254 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      |.|+++|+|+||+++++       +.+.+.+..... ..+.+.+.|.++..+|++..  ..++.+.+++++++++.+.+.
T Consensus       272 K~~~l~GlRiG~li~~~-------~~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~  343 (468)
T PLN02450        272 KDLGLPGFRVGAIYSND-------EMVVSAATKMSS-FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSG  343 (468)
T ss_pred             ccCCCCCccEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999863       224444444432 23568899999999997643  246788899999999999999


Q ss_pred             hhcCCCccccCCCCceeEEEEecCccccc-CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHH
Q 014631          332 IKEIPCITCPRKPEGSMFVMVKLNLSLLE-GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGL  407 (421)
Q Consensus       332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~  407 (421)
                      |+++ |+. +..|.+|+|+|++++..... ......++...+++++||.+.||..|+.  ++++|++++ .+++++++++
T Consensus       344 L~~~-gi~-~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l  421 (468)
T PLN02450        344 LEAA-GIK-CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAM  421 (468)
T ss_pred             HHHc-CCc-ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHH
Confidence            9988 887 55788999999998642110 1112345777788889999999998865  579999999 5899999999


Q ss_pred             HHHHHHHHHhh
Q 014631          408 GRIKAFCQRHA  418 (421)
Q Consensus       408 ~~l~~~~~~~~  418 (421)
                      ++|++++.+..
T Consensus       422 ~ri~~~l~~~~  432 (468)
T PLN02450        422 KRLKSFVESDS  432 (468)
T ss_pred             HHHHHHHHhcc
Confidence            99999987765

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=7.3e-48  Score=364.09  Aligned_cols=339  Identities=22%  Similarity=0.381  Sum_probs=280.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .+.++++|+.|.|.    +++++.+.+++.+....  ...|++..|.++||+++++|+++++|.++++++|++|+|++++
T Consensus        22 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a   95 (374)
T PRK05839         22 KEYKGLDLTIGEPQ----FETPKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV   95 (374)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence            37799999999977    46678888888876543  4689999999999999999999988988999999999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631          122 IQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF  199 (421)
Q Consensus       122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~  199 (421)
                      +..++.+++  ++||.|++++|+|..+...+...|++++.++.+.+++|.+|+++.+  + ++++++++++||||||.++
T Consensus        96 l~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~  172 (374)
T PRK05839         96 LFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTL  172 (374)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCccc
Confidence            999888764  5789999999999999999999999999999876667777765442  2 4689999999999999999


Q ss_pred             CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc------CCCCCEEEEcccccccCCCCceEEEEEeeCCCc
Q 014631          200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF------GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG  273 (421)
Q Consensus       200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  273 (421)
                      +.+++++|+++|+++|++||+||+|.++.+++ ...++...      ...+++++++||||.|++||+|+||++++    
T Consensus       173 s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~----  247 (374)
T PRK05839        173 SLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD----  247 (374)
T ss_pred             CHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC----
Confidence            99999999999999999999999999976433 22222211      12368999999999999999999999985    


Q ss_pred             chhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631          274 ILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV  352 (421)
Q Consensus       274 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~  352 (421)
                          +++++.+..... ...+.+.+.|.++..++..  +.++++.+++++++++.+.+.|    ++.   .|++|+|+|+
T Consensus       248 ----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l----~~~---~p~gg~fi~~  314 (374)
T PRK05839        248 ----ASILKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL----GIT---IPPATFYVWL  314 (374)
T ss_pred             ----HHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc----CCC---CCCeeEEEEE
Confidence                357777766543 2346677888888777753  5678888889999988887765    333   5789999999


Q ss_pred             ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      +++        +..+++.++++++||.+.||..|+.    .+++|+|++.+++++.+++++|.++++
T Consensus       315 ~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        315 PVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE  373 (374)
T ss_pred             eCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence            986        3567888877779999999988764    479999999889999999999998874

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=4.7e-48  Score=371.04  Aligned_cols=354  Identities=25%  Similarity=0.424  Sum_probs=302.9

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--C-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--E-FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~-~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      +.+++|+.|.|..  ...+.....+++.+.+...  . ...|++..|.++||+.+++++...+|+.+++++|++|+|+++
T Consensus        89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~  166 (459)
T COG1167          89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ  166 (459)
T ss_pred             CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence            8899999998663  2345566666776666432  2 457888899999999999999988999999999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCC--CCCccc
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNP--GNPCGN  197 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p--~nptG~  197 (421)
                      |++++++.+++|||+|++++|+|++...+++..|++++.+|++.   .++|+|++++.+.. ++|++ ++.|  |||||.
T Consensus       167 al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~---~G~~~e~le~~~~~~~~k~~-y~~P~~qNPtG~  242 (459)
T COG1167         167 ALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDE---DGIDPEALEEALAQWKPKAV-YVTPTFQNPTGV  242 (459)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC---CCCCHHHHHHHHhhcCCcEE-EECCCCCCCCCC
Confidence            99999999999999999999999999999999999999999862   35999999998876 45655 4444  899999


Q ss_pred             ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                      +||.++.++|+++|++||++||+||+|+.+.+++.+..++..++..+++|+++||||+ .+||+|+||++++        
T Consensus       243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p--------  313 (459)
T COG1167         243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAP--------  313 (459)
T ss_pred             ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCC--------
Confidence            9999999999999999999999999999999998888788899988999999999999 5999999999997        


Q ss_pred             HHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcC-C-CccccCCCCceeEEEEe
Q 014631          278 LRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEI-P-CITCPRKPEGSMFVMVK  353 (421)
Q Consensus       278 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~-g~~~~~~~~~~~~~~~~  353 (421)
                      +++++++...+. ...+++.+.|.+++..+..+. +.++.++++.++++++.+.++|.+. + .+. +..|.+|+|+|++
T Consensus       314 ~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~-~~~p~gG~flwl~  392 (459)
T COG1167         314 PELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELAT-WTRPEGGLFLWLE  392 (459)
T ss_pred             HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCee-eecCCceEEEEEE
Confidence            367788877654 356888999999999998533 7889999999999999999999986 4 344 6789999999999


Q ss_pred             cCcccccCCCChHHHHHHHHhhcCeeEEe-CCCCCC----CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631          354 LNLSLLEGISDDMEFALQLAKEESVIVLP-GMAVGM----KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~~----~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++..     .+...++.. +.++||.+.| |..|..    .+++|++++ .+.+++++++.+|.+++++..+
T Consensus       393 l~~~-----~~~~~l~~~-a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~  458 (459)
T COG1167         393 LPEG-----IDARELLAA-ALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA  458 (459)
T ss_pred             cCCC-----CCHHHHHHH-HHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            9864     246666665 4667999999 888865    348999999 7799999999999999987643

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=5.9e-48  Score=373.41  Aligned_cols=380  Identities=19%  Similarity=0.340  Sum_probs=292.8

Q ss_pred             hhhHHHHHHHHHHh-ccccC-CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHH
Q 014631           24 TLTVRSALTIIKQN-LKEND-PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-----------AEFDCYSPSVGILP   90 (421)
Q Consensus        24 ~~~~~~~~~~~~~~-~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~   90 (421)
                      .+.....+..+... ++... ...+|+|+.+.-.     ...+.+.+.+.+....           .....|++..|.++
T Consensus        24 ~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~   98 (496)
T PLN02376         24 NSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQ-----LCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKK   98 (496)
T ss_pred             CCchHHHHHHHhCCCCCcccCCCceEEeecchhh-----hhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHH
Confidence            34455544444442 33222 3468999988622     1223333444332211           22346888899999


Q ss_pred             HHHHHHHHHhhhCC--CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCC
Q 014631           91 ARRAIADYLNSELP--CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKG  167 (421)
Q Consensus        91 l~~~ia~~l~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~  167 (421)
                      ||+++|+|+++.+|  +.+++++|++|+|+++++..++.++++|||.|++++|+|.++...+. ..|++++.++++.+++
T Consensus        99 LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~  178 (496)
T PLN02376         99 FRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDN  178 (496)
T ss_pred             HHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCcc
Confidence            99999999998887  56899999999999999999999999999999999999999988776 5899999999876677


Q ss_pred             ccCCHHHHHhhh------ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-
Q 014631          168 WEVDLDGLEALA------DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-  240 (421)
Q Consensus       168 ~~~d~e~l~~~~------~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-  240 (421)
                      +++|++++++++      ..+++++++++||||||.++|.+++++|+++|++||++||+||+|..+.|.+..+.++..+ 
T Consensus       179 ~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~  258 (496)
T PLN02376        179 FKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVV  258 (496)
T ss_pred             CcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhh
Confidence            889999997653      2367889999999999999999999999999999999999999999998877655554443 


Q ss_pred             ---CC----CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--h
Q 014631          241 ---GS----TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--E  311 (421)
Q Consensus       241 ---~~----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~  311 (421)
                         +.    .+++++++||||.|++||+|+||+++++       +.+.+.+..... ....+.+.|.++..+|+...  +
T Consensus       259 ~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~-------~~l~~~~~~~~~-~~~vs~~~Q~a~~~~L~d~~~~~  330 (496)
T PLN02376        259 NDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFN-------DSVVSCARKMSS-FGLVSSQTQLMLASMLSDDQFVD  330 (496)
T ss_pred             ccccccccCCCeEEEEEeccccCCCCcceEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCChhHHH
Confidence               11    1346778999999999999999999853       234444433332 33578899999999997633  3


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCC-
Q 014631          312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGM-  388 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-  388 (421)
                      .++.+.+++++++++.+.+.|++. ++. +..|.+|+|+|++++....  .......++...++++.||.+.||..|+. 
T Consensus       331 ~~l~~~r~~l~~r~~~l~~~L~~~-gi~-~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~  408 (496)
T PLN02376        331 NFLMESSRRLGIRHKVFTTGIKKA-DIA-CLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT  408 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC
Confidence            556677888999999999999986 777 4478999999999964311  00112356777777778999999999864 


Q ss_pred             -CCeEEEEec-CCHHHHHHHHHHHHHHHHHhh
Q 014631          389 -KNWLRITFA-IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       389 -~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~  418 (421)
                       ++++|||++ .+++++++++++|++++.+.+
T Consensus       409 ~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~  440 (496)
T PLN02376        409 EPGWFRICFANMDDDTLHVALGRIQDFVSKNK  440 (496)
T ss_pred             CCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence             689999999 588999999999999997654

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=8.5e-48  Score=361.07  Aligned_cols=342  Identities=25%  Similarity=0.423  Sum_probs=287.1

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQ  123 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al~  123 (421)
                      ++++|+.|.|.    +++++.+.+++.+....  ...|++..|.++||+++++|+++.+|++++++ +|++|+|+++++.
T Consensus         1 ~~~~~~~g~p~----~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~   74 (350)
T TIGR03537         1 RLFDFGTGDPK----EPTPPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIF   74 (350)
T ss_pred             CeEeccCCCCC----CCCCHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence            36899999876    56678899999887653  46799889999999999999999889889998 9999999999999


Q ss_pred             HHHHHhcCCC---CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          124 VILTVLARPG---ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       124 ~~~~~l~~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      .++..++++|   |+|+++.|+|..+...++..|++++.++.+.++++.+|++++++++.++++++++++|+||||.+++
T Consensus        75 ~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~  154 (350)
T TIGR03537        75 HFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAP  154 (350)
T ss_pred             HHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccC
Confidence            9999998887   6999999999999999999999999999876677889999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      .+++++|+++|++||+++|+||+|..+.+++. ..++...+ .+++++++||||.++++|+|+||++++        +++
T Consensus       155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~--------~~~  224 (350)
T TIGR03537       155 RSYLKETIAMCREHGIILCSDECYTEIYFGEP-PHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGD--------EKL  224 (350)
T ss_pred             HHHHHHHHHHHHHcCcEEEEeccccccccCCC-CCchhhcC-cCCEEEEeecccccCCccccceeeecC--------HHH
Confidence            99999999999999999999999998766542 22333333 358999999999999999999999874        356


Q ss_pred             HHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          281 VDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       281 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      .+.+...... ..+++.+.|.++.+++..  ..+..+.+++++++++.+.+.|++. |+. +..|.+|+|+|++++..  
T Consensus       225 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~~~~~~~--  298 (350)
T TIGR03537       225 ISFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLWVKVPSG--  298 (350)
T ss_pred             HHHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEEEECCCC--
Confidence            6666665432 234555677777777653  4677888899999999999999987 777 55788899999999742  


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                         .++.+++..|+ ++||.+.||..|+.  .+++|++++.+++++++++++|++
T Consensus       299 ---~~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       299 ---IDAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER  349 (350)
T ss_pred             ---CCHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence               14667777765 57999999998865  579999998888999999998865

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=6.4e-48  Score=369.31  Aligned_cols=363  Identities=22%  Similarity=0.379  Sum_probs=292.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHhhhCC--CCCC
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-----------AEFDCYSPSVGILPARRAIADYLNSELP--CKLS  108 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~ia~~l~~~~~--~~~~  108 (421)
                      +...+|+|+.+.     |....+.+.+.+.+....           .....|.+..|.++||+++|+++++.+|  .+++
T Consensus        45 np~g~i~l~~ae-----N~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~  119 (447)
T PLN02607         45 NPSGVIQMGLAE-----NQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFD  119 (447)
T ss_pred             CCCceEEEechh-----hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcC
Confidence            355699999886     234566777777665331           1234578889999999999999998777  3588


Q ss_pred             CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCCccCCHHHHHhhhcc------
Q 014631          109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------  181 (421)
Q Consensus       109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------  181 (421)
                      +++|++|+|+++++..++.++++|||.|+++.|.|.++...+. ..|+++++++.+.+++|.+|++++++++.+      
T Consensus       120 p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~  199 (447)
T PLN02607        120 PDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANI  199 (447)
T ss_pred             HHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999999977665 579999999887677788999999988753      


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-------CCCCCEEEEccccc
Q 014631          182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-------GSTVPVITLGSMSK  254 (421)
Q Consensus       182 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~s~sK  254 (421)
                      ++++++++|||||||.++|.+++++|+++|++||+++|+||+|.++.|++..+.++..+       +..++++++.||||
T Consensus       200 ~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK  279 (447)
T PLN02607        200 RVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSK  279 (447)
T ss_pred             CeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchh
Confidence            67899999999999999999999999999999999999999999988876555554332       11467999999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l  332 (421)
                      .||++|+|+||+++.+       +++...+..... +..++.+.|.++..+|++..  +.++.+.+++++++++.+.+.|
T Consensus       280 ~fg~~GlRvG~ivs~n-------~~l~~~~~~~~~-~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L  351 (447)
T PLN02607        280 DLGLPGFRVGTIYSYN-------DKVVTTARRMSS-FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGL  351 (447)
T ss_pred             cCCCCcceEEEEEEcC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999843       345555554432 23567789999999997633  3567788899999999999999


Q ss_pred             hcCCCccccCCCCceeEEEEecCccccc-CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHH
Q 014631          333 KEIPCITCPRKPEGSMFVMVKLNLSLLE-GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLG  408 (421)
Q Consensus       333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~  408 (421)
                      ++. |+. +..+.+|+|+|++++..... ......++..++++++||.+.||..|+.  ++|+|++++ .++++++++++
T Consensus       352 ~~~-gi~-~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~  429 (447)
T PLN02607        352 RRA-GIE-CLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALK  429 (447)
T ss_pred             HhC-CCC-cccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHH
Confidence            987 787 44788999999999642100 0011345666777888999999998865  689999999 48999999999


Q ss_pred             HHHHHHHHhhh
Q 014631          409 RIKAFCQRHAK  419 (421)
Q Consensus       409 ~l~~~~~~~~~  419 (421)
                      +|.+++++.+.
T Consensus       430 Ri~~~l~~~~~  440 (447)
T PLN02607        430 RIHRFMDRRKT  440 (447)
T ss_pred             HHHHHHHHHHh
Confidence            99999977643

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=3.1e-47  Score=362.91  Aligned_cols=355  Identities=20%  Similarity=0.365  Sum_probs=295.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a  121 (421)
                      +.++++|+.|.|..    +.++.+.+++.+.+.......|++..|.+++|+++++|+++.+|+.++++ +|++|+|++++
T Consensus        28 ~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~  103 (395)
T PRK08175         28 GEDIIDFSMGNPDG----PTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG  103 (395)
T ss_pred             CCCeEEcCCCCCCC----CCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence            68899999998773    45667778887777655557899999999999999999998888888887 79999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---cCceEEEEeCCCCCcccc
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---ENTVAMVIVNPGNPCGNV  198 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~~~~~i~~~~p~nptG~~  198 (421)
                      ++.++..+++|||+|++++|+|..+...++..|++++.++.+.++.   +++++++.++   ++++++++++|+||||.+
T Consensus       104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~  180 (395)
T PRK08175        104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQC  180 (395)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence            9999999999999999999999999888899999999998865433   4677877665   367889999999999999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                      ++.+++++|+++|++||+++|+||+|.++.+++....++..++. .+.+++++||||.|++||+|+||++++        
T Consensus       181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~--------  252 (395)
T PRK08175        181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN--------  252 (395)
T ss_pred             CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC--------
Confidence            99999999999999999999999999998886654445444432 356788999999999999999999985        


Q ss_pred             HHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631          278 LRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       278 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      +++++.+.+.... ..+++.+.|.++..++.. .+.++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++.
T Consensus       253 ~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~i~l~~  329 (395)
T PRK08175        253 PELVSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVWAKIPE  329 (395)
T ss_pred             HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEEEECCc
Confidence            4677777765532 345667788888888864 35678888999999999999999988 776 5578899999999975


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ...  ..++.+++..+++++||.|.||..|+.  ++++|++++.+++.+.+++++|.+++++.
T Consensus       330 ~~~--~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~  390 (395)
T PRK08175        330 PYA--AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD  390 (395)
T ss_pred             ccC--CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence            320  013577887787889999999998865  46899999988999999999999998753

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-47  Score=366.46  Aligned_cols=374  Identities=20%  Similarity=0.302  Sum_probs=286.8

Q ss_pred             HHHHHHHHHHhccccCCC-------CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631           27 VRSALTIIKQNLKENDPR-------PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL   99 (421)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l   99 (421)
                      ..++..+|...+.++.+.       ++|+|+.|.|.    +++|+.+.+++ +.+..   .+|+++.|.+++|+++++++
T Consensus        76 ~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~~  147 (527)
T PRK09275         76 KEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKDY  147 (527)
T ss_pred             cccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHHH
Confidence            446777777777766543       57999999976    67788888854 44433   36999999999999999955


Q ss_pred             h-hhCCCCC-C--CCcEEEcCCHHHHHHHHHHH-----hcCCCCeEEEcCCCCcchHHHHhhcCcee--EeeeccCCCCc
Q 014631          100 N-SELPCKL-S--PDDVYLTAGCKQAIQVILTV-----LARPGANILLPKPGFPLYEANARHTRLEI--RHFDLLPEKGW  168 (421)
Q Consensus       100 ~-~~~~~~~-~--~~~i~~~~g~~~al~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~--~~~~~~~~~~~  168 (421)
                      . +.++... .  +++|++|+|+++++..++.+     +++|||+|++++|+|+.|...+...|.++  +.++.+++++|
T Consensus       148 ~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f  227 (527)
T PRK09275        148 LRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEW  227 (527)
T ss_pred             HHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCC
Confidence            4 3333222 2  34899999999999999886     68999999999999999999988876555  44444456679


Q ss_pred             cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631          169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV  246 (421)
Q Consensus       169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  246 (421)
                      .+|+++++++++++++++++++||||||.+++.+++++|+++|++  +|++||+||+|..+.+.   +.++... ..+++
T Consensus       228 ~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~~  303 (527)
T PRK09275        228 QYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYNT  303 (527)
T ss_pred             CCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCCE
Confidence            999999999988899999999999999999999999999999964  59999999999998642   2232222 23589


Q ss_pred             EEEcccccccCCCCceEEEEEeeCCCcchhHHHHH----------------------------HHH----hhh-cccccC
Q 014631          247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV----------------------------DSI----KGY-LNISSG  293 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~----------------------------~~~----~~~-~~~~~~  293 (421)
                      |++.||||.|+++|+|+||+++++.. ++  .+++                            +++    ... ...+.+
T Consensus       304 I~v~SfSK~f~mtG~RlG~i~~~~~~-v~--~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~  380 (527)
T PRK09275        304 ILVYSFSKYFGATGWRLGVIALHEDN-VF--DKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAG  380 (527)
T ss_pred             EEEeehhhhccCcHhHHhhhhcCchh-HH--HHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccC
Confidence            99999999999999999999997531 11  1122                            122    122 223457


Q ss_pred             CchHHHHHH-----HHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc---------
Q 014631          294 PATFVQGAV-----PQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL---------  359 (421)
Q Consensus       294 ~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~---------  359 (421)
                      .+.+.|.++     .++++ ..+.+.++.++.++++++.+.+.|. . ++. ...|.+++|+|++++....         
T Consensus       381 ~s~p~Q~a~al~~~~all~-~~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~-~~~p~g~fY~~~di~~~~~~~~g~~f~~  456 (527)
T PRK09275        381 LSTPQQVQMALFSLFALLD-EEDAYKKAMKDIIRRRYKALYEGLG-L-PEP-EDPNNAAYYTLIDLEEWAEKNYGKEFAD  456 (527)
T ss_pred             CCCHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHcC-C-CCc-CCCCCeeEEEEEEhHHhhhhccCchhhh
Confidence            777888862     33454 3457888899999999999988883 2 232 2368999999998864210         


Q ss_pred             --cCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631          360 --EGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       360 --~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                        ....++.+++.+|+++.||.+.||..|+. ++++|+|++ .+++++.+++++|++++.++.+
T Consensus       457 ~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~  520 (527)
T PRK09275        457 YLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE  520 (527)
T ss_pred             hhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence              01125788999999999999999999986 568999999 5889999999999999988754

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=1.3e-46  Score=359.28  Aligned_cols=344  Identities=20%  Similarity=0.272  Sum_probs=276.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      .+.++++|+.|.|.    +++++.+.+++.+.+...    ....|++..|.++||+++|+++.+.   .+++++|++|+|
T Consensus        31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~G  103 (402)
T TIGR03542        31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDG  103 (402)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCC
Confidence            46889999999866    467888999998887652    2346988899999999999986431   378899999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCc-----------eeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631          118 CKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRL-----------EIRHFDLLPEKGWEVDLDGLEALADENTVAM  186 (421)
Q Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i  186 (421)
                      +++++..++ .++.+||+|++++|+|..+...++..|+           +++.++.+.++++.++++.     .++++++
T Consensus       104 a~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i  177 (402)
T TIGR03542       104 AKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDII  177 (402)
T ss_pred             cHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEE
Confidence            999999865 4558999999999999999999999999           8888887655555555432     1468899


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEE
Q 014631          187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      ++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++..++. .+++++++||||.|++||+|+||
T Consensus       178 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~  257 (402)
T TIGR03542       178 YLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW  257 (402)
T ss_pred             EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence            99999999999999999999999999999999999999998876543334444443 35789999999999999999999


Q ss_pred             EEeeCCCcchhHHHHH--------HHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          266 LVTSDPSGILQELRIV--------DSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      ++++.        +++        ..+... .....+++.++|.++..++......+..+.++.++++++.+.+.|++. 
T Consensus       258 ~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-  328 (402)
T TIGR03542       258 TVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-  328 (402)
T ss_pred             EEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            99963        232        222221 122335778899988888865344556677788999999999999986 


Q ss_pred             CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      ++. +..|.+++|+|++++..     .++.+++..+++++||.+.||+.|+.  .+++|++++.+++++++++++|+++
T Consensus       329 ~~~-~~~~~~~~f~~v~l~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~  401 (402)
T TIGR03542       329 GFK-VYGGEHAPYLWVKTPEG-----ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA  401 (402)
T ss_pred             Cce-ecCCCceeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence            776 54677899999999742     24667888888888999999998865  4799999887899999999999875

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.9e-46  Score=354.32  Aligned_cols=370  Identities=22%  Similarity=0.353  Sum_probs=295.8

Q ss_pred             hhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhh
Q 014631           25 LTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSE  102 (421)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~  102 (421)
                      ..+++++..........+..++++|+.|.|.    +++++.+.+++.+.+...  ....|++..|++++|+.+++++++.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~   89 (394)
T PRK06836         14 SWIRKMFEEGARLKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRR   89 (394)
T ss_pred             cHHHHHHHHHHHHHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHH
Confidence            3455555444322112235678999999866    467889999998887642  2468988899999999999999998


Q ss_pred             CCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC
Q 014631          103 LPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN  182 (421)
Q Consensus       103 ~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~  182 (421)
                      ++..+++++|++|+|++++++.+++.++++||.|++++|+|..+...++..|.+++.++.+++ ++++|++++++.++++
T Consensus        90 ~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~  168 (394)
T PRK06836         90 FGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPK  168 (394)
T ss_pred             hCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcC
Confidence            888889999999999999999999999999999999999999999999999999999998643 4679999999999888


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHHh------cCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARK------LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      ++++++++|+||||.++|.+++++|+++|++      ||+++|+||+|.++.+++.....+..  ..+++++++||||.|
T Consensus       169 ~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~  246 (394)
T PRK06836        169 TKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSKSL  246 (394)
T ss_pred             ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchhhc
Confidence            9999999999999999999999999999999      89999999999999876644333222  235789999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      ++||+|+||+++++..  .....+...+.....  ...+++.+.|.++..++...      ..++.++++++.+.+.|++
T Consensus       247 ~~pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~  318 (394)
T PRK06836        247 SLPGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTE  318 (394)
T ss_pred             cCcceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHh
Confidence            9999999999986321  100112222222211  12356778888888888641      1256778888999999988


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      + |+. +..|.+|+|+|+.++..      +..+++. .+.++||.+.||..|+..+++||+++.+++++++++.+|++++
T Consensus       319 ~-g~~-~~~~~gg~~~~~~~~~~------~~~~~~~-~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l  389 (394)
T PRK06836        319 L-GFE-CVKPQGAFYLFPKSPEE------DDVAFCE-KAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLA  389 (394)
T ss_pred             C-CCE-eecCCceEEEEEeCCCC------CHHHHHH-HHHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            7 777 55788899999988642      4566765 4577899999999998788999999989999999999999999


Q ss_pred             HHhh
Q 014631          415 QRHA  418 (421)
Q Consensus       415 ~~~~  418 (421)
                      +++.
T Consensus       390 ~~~~  393 (394)
T PRK06836        390 KEYK  393 (394)
T ss_pred             HHhc
Confidence            8764

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=2.6e-47  Score=363.62  Aligned_cols=370  Identities=19%  Similarity=0.212  Sum_probs=284.4

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSA-FPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      ..++++.++.+...++...    .+++|+|+.|.|.. ...+|..+.+.+++.+.++......|++..|.++||+++++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~   81 (396)
T PRK09257          6 EAAPADPILGLMEAFRADP----RPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL   81 (396)
T ss_pred             CCCCCChHHHHHHHHhhCC----CcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence            3445666777666665422    35789999997531 111222478888888877654455899999999999999999


Q ss_pred             HhhhCCCCCCCCcE--EEcCCHHHHHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHH
Q 014631           99 LNSELPCKLSPDDV--YLTAGCKQAIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG  174 (421)
Q Consensus        99 l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~  174 (421)
                      +....+..+++++|  ++|+|+++++.++++++  ++|||+|++++|+|..+...++..|++++.++....+++++|+++
T Consensus        82 ~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~  161 (396)
T PRK09257         82 LFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDA  161 (396)
T ss_pred             hcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHH
Confidence            97765545578887  99999999999998766  489999999999999999999999999999987434457899999


Q ss_pred             HHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC-CCcccccccC-CCCCEEEE
Q 014631          175 LEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS-TPYVRMGVFG-STVPVITL  249 (421)
Q Consensus       175 l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~~~i~~  249 (421)
                      +++.+.   +++.++++++||||||.++|.+++++|+++|++||++||+||+|.++.++. ....++..+. ..++++++
T Consensus       162 l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i  241 (396)
T PRK09257        162 MLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVA  241 (396)
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEE
Confidence            998765   234556679999999999999999999999999999999999999987642 2223333333 23579999


Q ss_pred             cccccccCCCCceEEEEEeeC-CCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSD-PSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDILR  322 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~  322 (421)
                      +||||.|+++|+|+||+++.. +....  ..+...+.... ..+.+++.+.|.++..++....     ..++++.+++++
T Consensus       242 ~SfSK~~~~~GlRiG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~  319 (396)
T PRK09257        242 SSFSKNFGLYGERVGALSVVAEDAEEA--DRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIK  319 (396)
T ss_pred             EEcCCcCccccccceeEEEEeCCHHHH--HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998521 11000  12344443332 2344678889999988887532     356777889999


Q ss_pred             HHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-C
Q 014631          323 DTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-I  398 (421)
Q Consensus       323 ~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~  398 (421)
                      ++++.+.+.|+++.   ++. +..|.+|+|+|++++          .+++.++++++||.+.|.      +  |++++ .
T Consensus       320 ~rr~~l~~~L~~~~~~~~~~-~~~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~------~--ri~~~~~  380 (396)
T PRK09257        320 AMRQLLVEALKAKGPSRDFD-FIARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGS------G--RINVAGL  380 (396)
T ss_pred             HHHHHHHHHHHhcCCCCCcc-cccccceEEEecCCC----------HHHHHHHHHcCCEEEcCC------C--eEEEeeC
Confidence            99999999999862   355 457999999998774          246677889999999873      1  99998 7


Q ss_pred             CHHHHHHHHHHHHHHH
Q 014631          399 EPSALEEGLGRIKAFC  414 (421)
Q Consensus       399 ~~e~l~~~~~~l~~~~  414 (421)
                      +++++++++++|++++
T Consensus       381 ~~~~i~~~~~~i~~~~  396 (396)
T PRK09257        381 NESNIDYVAEAIAAVL  396 (396)
T ss_pred             CHHHHHHHHHHHHhhC
Confidence            9999999999998763

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=2.5e-46  Score=360.54  Aligned_cols=338  Identities=17%  Similarity=0.208  Sum_probs=277.9

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      ..+++|+.|.|.    .+.++.+.+++.+....  ...|++..|.++||+++++|++...+   .+++|++|+|+++++.
T Consensus        85 ~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~  155 (431)
T PRK15481         85 TPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIE  155 (431)
T ss_pred             chhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHH
Confidence            356888888765    34455677777775543  35799999999999999999876332   3569999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe-CCCCCcccccCHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV-NPGNPCGNVFTYQ  202 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~-~p~nptG~~~~~~  202 (421)
                      .+++++++|||.|++++|+|..+...++..|++++.++++. +  ++|+|++++.+++++++++++ +||||||.++|.+
T Consensus       156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~  232 (431)
T PRK15481        156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA-E--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSAR  232 (431)
T ss_pred             HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC-C--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHH
Confidence            99999999999999999999999999999999999998753 2  489999999887788888876 9999999999999


Q ss_pred             HHHHHHHHHHhc-CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          203 QLQKIAEKARKL-GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       203 ~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++++|+++|+++ |++||+||+|.++.+.+.  .+.... ..+++++++||||.|+ +|+|+||++++        +++.
T Consensus       233 ~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~--------~~~~  300 (431)
T PRK15481        233 RAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASD--------SATS  300 (431)
T ss_pred             HHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCC--------HHHH
Confidence            999999999999 999999999999875432  121122 2358999999999998 99999999985        3566


Q ss_pred             HHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          282 DSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       282 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      +.+..... ...+.+.++|.++..+|+... ..++++.++.++++++.+.+.|++. ++. +..|++|+|+|++++.   
T Consensus       301 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~~~l~~---  375 (431)
T PRK15481        301 ARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLWLPLDT---  375 (431)
T ss_pred             HHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEEEECCC---
Confidence            76655433 234578899999999998643 4678889999999999999999987 776 4479999999999973   


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec-CCHHHHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA-IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~-~~~e~l~~~~~~l~~~~~  415 (421)
                          +..+++..+ .++||.+.||..|+.   .+++|+|++ .+++++++++++|++++.
T Consensus       376 ----~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        376 ----DSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN  430 (431)
T ss_pred             ----CHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence                355666665 578999999998854   368999999 678999999999999864

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-46  Score=358.66  Aligned_cols=372  Identities=16%  Similarity=0.175  Sum_probs=278.9

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      +...+.+.++.+...+++..    +++++||+.|.|. ..+.....+.+.+++.+.........|++..|.+++|+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~   83 (404)
T PTZ00376          8 VPLGPPDPILGLAAAFKADP----SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQK   83 (404)
T ss_pred             CCcCCCChHHHHHHHHhhcC----CcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Confidence            33445566777777665322    4688999999863 211112233444444433332344689999999999999999


Q ss_pred             HHhhhCCCCCCCCcEE--EcCCHHHHHHHHHH---HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCH
Q 014631           98 YLNSELPCKLSPDDVY--LTAGCKQAIQVILT---VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL  172 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~--~~~g~~~al~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  172 (421)
                      |+....+..+++++|+  .|.|+++++.+++.   .+++|||+|++++|+|+.|...++..|++++.+++.+++++++|+
T Consensus        84 ~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~  163 (404)
T PTZ00376         84 LLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDF  163 (404)
T ss_pred             HhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCH
Confidence            9976555557888998  48999999988875   567999999999999999999999999999999985555688999


Q ss_pred             HHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--CcccccccC-CCCCE
Q 014631          173 DGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVFG-STVPV  246 (421)
Q Consensus       173 e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~  246 (421)
                      +.+++.+.   ++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++.  ...++..+. ..+++
T Consensus       164 ~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~v  243 (404)
T PTZ00376        164 DGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEF  243 (404)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcE
Confidence            99999874   3456777899999999999999999999999999999999999999887541  122222222 23479


Q ss_pred             EEEcccccccCCCCceEEEEEee-CCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc--h---hHHHHHHH
Q 014631          247 ITLGSMSKRWIVPGWRLGWLVTS-DPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK--E---DFFSKIVD  319 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~---~~~~~~~~  319 (421)
                      ++++||||.|+++|+|+||+++. .+....  ..+.+.+.... ....+++.+.|.++..+++...  +   ....+.++
T Consensus       244 i~i~SfSK~~~~~GlRvG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~  321 (404)
T PTZ00376        244 LVAQSFSKNMGLYGERIGALHIVCANKEEA--ANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSG  321 (404)
T ss_pred             EEEEeCCCcccccccccceEEEEeCCHHHH--HHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999998531 111000  12333443322 2334567789999999997522  2   23455667


Q ss_pred             HHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe
Q 014631          320 ILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF  396 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~  396 (421)
                      +++++++.+.+.|+++.   ++. ...|.+|+|+|+.++          .+++.+|++++||.+.||.        ||++
T Consensus       322 ~~~~~r~~l~~~L~~~~~~~~~~-~~~p~gg~f~~~~~~----------~~~~~~L~~~~~v~v~p~~--------Ris~  382 (404)
T PTZ00376        322 RIQNMRQLLYDELKALGSPGDWE-HIINQIGMFSFTGLT----------KEQVERLIEKYHIYLLDNG--------RISV  382 (404)
T ss_pred             HHHHHHHHHHHHHHhcCCCCccc-ccccCceEEEecCCC----------HHHHHHHHHhCCEeecCCC--------eEEE
Confidence            89999999999999862   244 347899999998773          4678888888899999971        9999


Q ss_pred             c-CCHHHHHHHHHHHHHHHH
Q 014631          397 A-IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       397 ~-~~~e~l~~~~~~l~~~~~  415 (421)
                      + .+.+++++++++|++++.
T Consensus       383 ~~~~~~~~~~~~~~l~~~~~  402 (404)
T PTZ00376        383 AGLTSKNVDYVAEAIHDVVR  402 (404)
T ss_pred             eccCHHhHHHHHHHHHHHHh
Confidence            7 899999999999999875

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=4.8e-47  Score=358.94  Aligned_cols=349  Identities=30%  Similarity=0.551  Sum_probs=294.3

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVD-AVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAI  122 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al  122 (421)
                      .+|||+.|++......+.++.+.+++.+ .........|++..|.+++|+++++|+++..|...+++ +|++++|+.+++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            5899999997743233355556666655 33444567999999999999999999997778788898 999999999999


Q ss_pred             HHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCc
Q 014631          123 QVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPC  195 (421)
Q Consensus       123 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~npt  195 (421)
                      ..+...+ .++||+|++++|+|+.+...++..|.+++.+++..++++.+|++++++.+++      +++++++++|+|||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt  161 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT  161 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence            9999999 7899999999999999999999999999999987778889999999998876      56889999999999


Q ss_pred             ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcc
Q 014631          196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI  274 (421)
Q Consensus       196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  274 (421)
                      |..+|.+++++|+++|++||+++|+||+|.++.++...+.+ ....+...+++++.|+||.|+++|+|+||++++     
T Consensus       162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~-----  236 (363)
T PF00155_consen  162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP-----  236 (363)
T ss_dssp             TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE-----
T ss_pred             ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch-----
Confidence            99999999999999999999999999999999887554433 344555566999999999999999999999995     


Q ss_pred             hhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631          275 LQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV  352 (421)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~  352 (421)
                         +++.+.+......... +.+.+.++..++....  ..++++.+++++++++.+.+.|++. ++. +..+.+++|.|+
T Consensus       237 ---~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~  310 (363)
T PF00155_consen  237 ---PELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT-VLPPEAGFFLWV  310 (363)
T ss_dssp             ---HHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHHSBSSEEEE
T ss_pred             ---hhhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh-eeeccCccEEEE
Confidence               4677877777654333 7788888888877533  2388999999999999999999988 888 446778999999


Q ss_pred             ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-cCCHHHHHHHHHHH
Q 014631          353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-AIEPSALEEGLGRI  410 (421)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~~~~e~l~~~~~~l  410 (421)
                      .++..      ++.++..+|+++.||.+.||..|+.++++|+++ +.+++++++++++|
T Consensus       311 ~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  311 RLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             EESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             Ecccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence            88753      357888888777799999999999899999999 58999999999986

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.3e-45  Score=346.79  Aligned_cols=349  Identities=19%  Similarity=0.326  Sum_probs=286.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++|+|+.|.+.    +++++.+.+++.+.+.......|++..|++++|+++++++      ++++++|++|+|+++++
T Consensus        27 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al   96 (380)
T PRK06225         27 DKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL   96 (380)
T ss_pred             cCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence            5689999998755    5788999999999987655567988889999999999998      46788999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC-CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP-EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ..++++++.+||+|++++|+|..+...++..|.+++.++++. ++++.+|++++++.++++++++++++|+||||.++|.
T Consensus        97 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~  176 (380)
T PRK06225         97 YLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE  176 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence            999999999999999999999998888899999999998743 3467899999999988889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|+++|+++|+++|+||+|.++..+. .  ....++ .++++++.||||.|+++|+|+||++++        ++++
T Consensus       177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~--~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~--------~~l~  244 (380)
T PRK06225        177 EEIKEFAEIARDNDAFLLHDCTYRDFAREH-T--LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVAT--------PDLI  244 (380)
T ss_pred             HHHHHHHHHHHHCCcEEEEehhHHHHhccC-C--chhhcC-CCCEEEEeechhhcCCccceeEEEecC--------HHHH
Confidence            999999999999999999999998865321 1  222222 357899999999999999999999985        3566


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+........+.+.+.|.++..++.. ...+.++.++.++++++.+.+.|++++++.+...|.+|+|+|+.++...   
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~---  320 (380)
T PRK06225        245 EVVKSIVINDLGTNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG---  320 (380)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc---
Confidence            666655433446778888888888864 3466777777888888889999998777542335667888999886421   


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       .+..++...+ .++||.+.||..|+.   .+++|++++.++|++++++++|++++++++.
T Consensus       321 -~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~  379 (380)
T PRK06225        321 -IDPEDLVEYL-LERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT  379 (380)
T ss_pred             -CCHHHHHHHH-HHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence             1466777766 478999999976643   4689999998899999999999999998875

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=4.1e-45  Score=344.92  Aligned_cols=330  Identities=21%  Similarity=0.343  Sum_probs=269.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC-CCCCcEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK-LSPDDVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~-~~~~~i~~~~g~~~a  121 (421)
                      +.++++|+.|.|.    .+.++.+.+++.+....   ..|++..|.+++|+++++|+.+.+|+. +++++|++|+|++++
T Consensus        26 ~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~   98 (364)
T PRK07865         26 PDGIVDLSVGTPV----DPVPPVIQEALAAAADA---PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKEL   98 (364)
T ss_pred             CCCEEEcCCCCCC----CCCCHHHHHHHHHHHhh---CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHH
Confidence            5679999999865    35578888888776532   479988999999999999999988886 899999999999999


Q ss_pred             HHHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          122 IQVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       122 l~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      +..++..+ +++||.|++++|+|..+...++..|++++.++         ++++++.   ++++++++++||||||.+++
T Consensus        99 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~~~l~~---~~~~~v~~~~p~NPtG~~~~  166 (364)
T PRK07865         99 VAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD---------SLTELGP---QRPALIWLNSPSNPTGRVLG  166 (364)
T ss_pred             HHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC---------ChhhCCc---ccceEEEEcCCCCCCCccCC
Confidence            99988888 79999999999999999999999999887763         2233322   56789999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc---CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF---GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                      .+++++|+++|+++|++||+||+|.++.+++.....+...   ...+++++++||||.|+++|+|+||++++        
T Consensus       167 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~--------  238 (364)
T PRK07865        167 VDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGD--------  238 (364)
T ss_pred             HHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecC--------
Confidence            9999999999999999999999999988765322222110   12357999999999999999999999885        


Q ss_pred             HHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631          278 LRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       278 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      +++++.+..... ...+.+.+.|.++..++..  ..+.++.++.++++++.+.+.|++. |+. +..|++|+|+|+.++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~  314 (364)
T PRK07865        239 PALVAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAA-GFR-VDHSEAGLYLWATRGE  314 (364)
T ss_pred             HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCccEEEEEeCCC
Confidence            356777765542 2346778899998888864  5677888889999999999999987 777 5578889999998742


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHH
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIK  411 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~  411 (421)
                             +..++.. .+.++||.+.||..|+.  .+++||+++.+++++++++++|+
T Consensus       315 -------~~~~~~~-~l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~  363 (364)
T PRK07865        315 -------DCWDTVA-WLAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA  363 (364)
T ss_pred             -------CHHHHHH-HHHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence                   3445554 45778999999998864  57999999878999999999875

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=2.4e-45  Score=351.26  Aligned_cols=377  Identities=20%  Similarity=0.295  Sum_probs=280.3

Q ss_pred             HHHHHHHHHHhccccCC-------CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH-HH
Q 014631           27 VRSALTIIKQNLKENDP-------RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA-DY   98 (421)
Q Consensus        27 ~~~~~~~~~~~~~~~~~-------~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia-~~   98 (421)
                      ..++..+|...+.++.+       .++|+|+.|.|.    +++++.+ +++.+.+..   .+|+++.|..+++++++ +|
T Consensus        70 ~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~~-~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y  141 (521)
T TIGR03801        70 KEGIEERFETFLAENKSQPGAEFLRDIISYVIDQLG----FDPDAFL-YEMCDGIIG---DNYPVPDRMLPHSEKIVHQY  141 (521)
T ss_pred             cchHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHH-HHHHHHhhc---CCCCCCCCCHHHHHHHHHHH
Confidence            45677777777766543       257999999977    4555444 556555533   26876777777777776 57


Q ss_pred             HhhhCCCCCCC-C--cEEEcCCHHHHHHHHHHH-----hcCCCCeEEEcCCCCcchHHHHhhc--CceeEeeeccCCCC-
Q 014631           99 LNSELPCKLSP-D--DVYLTAGCKQAIQVILTV-----LARPGANILLPKPGFPLYEANARHT--RLEIRHFDLLPEKG-  167 (421)
Q Consensus        99 l~~~~~~~~~~-~--~i~~~~g~~~al~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~-  167 (421)
                      +.+.++....+ +  +|++|+|+++++..++.+     +++|||+|++++|+|+.|...+...  |.+++.++.+.+++ 
T Consensus       142 ~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~  221 (521)
T TIGR03801       142 LIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTED  221 (521)
T ss_pred             HHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeeccccccc
Confidence            77665433333 3  899999999999999887     6899999999999999999887776  56666666654433 


Q ss_pred             ----ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--CcEEEEcccccccccCCCCcccccccC
Q 014631          168 ----WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       168 ----~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                          |.+|+++++++++++++++++++|+||||.+++.+++++|+++|++|  |++||+||+|..+.+.   +.++... 
T Consensus       222 g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~-  297 (521)
T TIGR03801       222 GTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAE-  297 (521)
T ss_pred             ccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhh-
Confidence                88999999998888999999999999999999999999999999986  9999999999987742   2233232 


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH------HHHHHHH------------------------hhhc-cc
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE------LRIVDSI------------------------KGYL-NI  290 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~------~~~~~~~------------------------~~~~-~~  290 (421)
                      ..++++++.||||.|+++|+|+||+++++. .+++.      ++..+.+                        .... ..
T Consensus       298 ~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~-~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~  376 (521)
T TIGR03801       298 LPYNTIGVYSFSKYFGATGWRLGTIALHKD-NIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNH  376 (521)
T ss_pred             CCCCEEEEEcchhhccCchhhhhhhhcCch-HHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhc
Confidence            235799999999999999999999998642 11100      0011111                        1111 22


Q ss_pred             ccCCchHHHH--H---HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc------
Q 014631          291 SSGPATFVQG--A---VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL------  359 (421)
Q Consensus       291 ~~~~~~~~~~--~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~------  359 (421)
                      +.+.+.+.|.  +   +.++++ ..+.+.++.++.++++++.+.+.| .+ .+. ...|.+++|+|++++....      
T Consensus       377 ~~g~s~p~Q~q~al~a~~all~-~~~~y~~~~~~~~~~R~~~l~~~L-g~-~~~-~~~~~g~~Y~~~di~~~~~~~~~~~  452 (521)
T TIGR03801       377 TAGLSTPQQVQMALFSLFALMD-KENAYKAETKDICRRREKLLFRGL-GL-PLQ-EDPNDVAYYTLIDLEEWAEKNYGEE  452 (521)
T ss_pred             cCCCCcHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHHhc-CC-CCc-CCCCCeEEEEEeehHHHHHHhcchH
Confidence            3455666665  3   344454 345788889999999999999888 22 222 2368889999999874211      


Q ss_pred             -----cCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          360 -----EGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA-IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       360 -----~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                           ....++.+++.+|+++.||.+.||..|+. .+++|||++ .+++++.+++++|+++++++.++
T Consensus       453 f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~~  520 (521)
T TIGR03801       453 FSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYEA  520 (521)
T ss_pred             HHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence                 00125788999999999999999999986 457999999 68899999999999999887653

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PLN02368 alanine transaminase

Probab=100.00  E-value=4.8e-46  Score=351.75  Aligned_cols=331  Identities=22%  Similarity=0.378  Sum_probs=260.8

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCC----CCC----------------------CCcHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAF----PCF----------------------RTTPVAADAVV   71 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~----~~~----------------------~~~~~v~~a~~   71 (421)
                      ++.+++.+.++.+..+.++.  +..+.++|+|++|+|...    ..+                      .+++.+.+++.
T Consensus        14 ~~~~~~~~~~~~~~~~a~~~--~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~   91 (407)
T PLN02368         14 NVKKCQYAVRGELYLRASEL--QKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKH   91 (407)
T ss_pred             HHHhhhhhcCCHHHHHHHHH--HHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHH
Confidence            44555555555544443332  224789999999998521    001                      24556666654


Q ss_pred             HHHh-cCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCcchHHH
Q 014631           72 DAVR-SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFPLYEAN  149 (421)
Q Consensus        72 ~~~~-~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~  149 (421)
                      .... ......|++..|.++||+++++|+++++|..+++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...
T Consensus        92 ~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~  171 (407)
T PLN02368         92 YLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSAT  171 (407)
T ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHH
Confidence            4322 2235689999999999999999999988888999999999999999999999987 7999999999999999999


Q ss_pred             HhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631          150 ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV  223 (421)
Q Consensus       150 ~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~  223 (421)
                      +...|++++.++++.+++|++|++++++.+++      +++++++++||||||.+++.+++++|+++|++||++||+||+
T Consensus       172 ~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~  251 (407)
T PLN02368        172 ISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEV  251 (407)
T ss_pred             HHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence            99999999999987777899999999998763      678899999999999999999999999999999999999999


Q ss_pred             ccccccCCC-Ccccccc----cC----CCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccC
Q 014631          224 YDHLTFGST-PYVRMGV----FG----STVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSG  293 (421)
Q Consensus       224 ~~~~~~~~~-~~~~~~~----~~----~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (421)
                      |.++.|++. .+.++..    ++    ..+++|+++||||.| +++|+|+||+++.+..     +++++.+........+
T Consensus       252 Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~-----~~li~~~~~~~~~~~~  326 (407)
T PLN02368        252 YQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP-----PKTVEEIYKVASIALS  326 (407)
T ss_pred             ccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC-----HHHHHHHHHHhcccCC
Confidence            999998764 3333222    22    234799999999998 7999999999952111     3567777665433456


Q ss_pred             CchHHHHHHHHHhhccc------hhHH---HHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631          294 PATFVQGAVPQIFKNTK------EDFF---SKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       294 ~~~~~~~~~~~~l~~~~------~~~~---~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      ++.++|.++.++++...      ..+.   ++..+.++++++.+.+.|+++||+.+ ..|+|++|+|++++.
T Consensus       327 ~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~-~~P~Gafy~~~~i~l  397 (407)
T PLN02368        327 PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVC-NFTEGAMYSFPQIKL  397 (407)
T ss_pred             CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEe-CCCCeeeEeccCCCC
Confidence            88899999999996421      1223   44678999999999999999999984 489999999987764

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.1e-44  Score=338.80  Aligned_cols=345  Identities=21%  Similarity=0.306  Sum_probs=276.1

Q ss_pred             hhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 014631           25 LTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELP  104 (421)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~  104 (421)
                      .+++.+++...+.. + .+..+++|+.|+|.    ++.++.+.+++.+...   ...|++..|.++||+++++|+++++|
T Consensus         4 ~~~~~~~~~~~~~~-~-~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~   74 (357)
T TIGR03539         4 FPWDSLAPYKAKAA-S-HPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRG   74 (357)
T ss_pred             chHHHHHHHHHHhh-h-CCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcC
Confidence            44556665555432 2 36789999999875    4667888888877653   25799999999999999999999888


Q ss_pred             CC-CCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC
Q 014631          105 CK-LSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN  182 (421)
Q Consensus       105 ~~-~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~  182 (421)
                      +. +++++|++|+|+++++..++..+ .++||.|++++|+|.++...++..|++++.++         +++.+.   .++
T Consensus        75 ~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~  142 (357)
T TIGR03539        75 VPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVG  142 (357)
T ss_pred             CCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccC
Confidence            86 99999999999999999998887 79999999999999999988899998877653         223322   246


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc--c-CCCCCEEEEcccccccCCC
Q 014631          183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV--F-GSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~-~~~~~~i~~~s~sK~~~~~  259 (421)
                      ++++++++|+||||.+++.+++++|.++|++||+++|+||+|.++.+++.....+..  . ...+++++++||||.|+++
T Consensus       143 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~  222 (357)
T TIGR03539       143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA  222 (357)
T ss_pred             ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCC
Confidence            889999999999999999999999999999999999999999988876542222211  0 1235789999999999999


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI  338 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  338 (421)
                      |+|+||++++        +++++.+..... ...+++.+.|.++..+|+.  ..+..+.++.++++++.+.+.|.+. |+
T Consensus       223 G~R~G~~i~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-g~  291 (357)
T TIGR03539       223 GYRAGFVAGD--------PALVAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-GF  291 (357)
T ss_pred             ceeEEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence            9999999975        356666655543 2346788899998888864  4667778889999999999999986 77


Q ss_pred             cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHH
Q 014631          339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                      . +..|.+|+|+|++++.       +..++... +.++||.+.||..|+.  ++++|+|++.+++++++++++|
T Consensus       292 ~-~~~p~~~~~~~~~~~~-------~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l  356 (357)
T TIGR03539       292 R-IDHSEAGLYLWATRGE-------DAWDTVDR-LAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL  356 (357)
T ss_pred             C-CcCCCccEEEEEECCC-------CHHHHHHH-HHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence            7 5578899999998752       34556654 5788999999998764  4799999998889999999876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3.2e-45  Score=344.00  Aligned_cols=330  Identities=20%  Similarity=0.300  Sum_probs=272.1

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++|+|+.|.+.    +++++.+++++.+.+...  ..| |..|.++||+++++|+      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~~--~~Y-p~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i   94 (366)
T PRK01533         28 DHSFVKLASNENP----FGCSPRVLDELQKSWLDH--ALY-PDGGATTLRQTIANKL------HVKMEQVLCGSGLDEVI   94 (366)
T ss_pred             CCceEEeCCCCCC----CCCCHHHHHHHHHHHHhc--CcC-CCCCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            5689999999865    688899999998876552  346 5678899999999998      47899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++.+++++||+|++++|+|..|...+...|.+++.++.+   ++++|++++++.++++++++++++||||||.+++.+
T Consensus        95 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~  171 (366)
T PRK01533         95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR  171 (366)
T ss_pred             HHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence            99999999999999999999999999999999999999874   346899999998888899999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|+++|++++ ++|+||+|.++.+.+.....+..++..+++|+++||||.|+++|+|+||++++        +++++
T Consensus       172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~--------~~~~~  242 (366)
T PRK01533        172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH--------EELIE  242 (366)
T ss_pred             HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC--------HHHHH
Confidence            9999999998876 56779999988765432222333445568999999999999999999999985        45777


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+..... ..+.+.++|.++..+|+.  ..+.++.++..+++++.+.+.++.+ |+. + .+..++|+|+.++       
T Consensus       243 ~l~~~~~-~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~~~~nf~~~~~~-------  309 (366)
T PRK01533        243 KLNVVRL-PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQSQTNFIFLPVE-------  309 (366)
T ss_pred             HHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCcCcEEEEeCC-------
Confidence            7776653 357889999999999964  5777888888888888888888877 777 4 3446779999885       


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~  418 (421)
                       +...+...+ .++||.|++   |  ++++||+++.. ++.++++++|+++++..+
T Consensus       310 -~~~~~~~~l-~~~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~~~  357 (366)
T PRK01533        310 -NGGEIYEAC-AHAGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFENKK  357 (366)
T ss_pred             -CHHHHHHHH-HHCCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHhcc
Confidence             245566555 578999997   3  57899998754 677899999988876543

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-44  Score=340.94  Aligned_cols=328  Identities=20%  Similarity=0.356  Sum_probs=271.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++++|+.|.+.    +++++.+.+++.+.+..  ...|+ ..|.++||+++++++      ++++++|++|+|+++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al   95 (357)
T PRK14809         29 PDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYP-KASHADLTAALADRW------DVSPEQVWLANGGDGAL   95 (357)
T ss_pred             ccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            5689999999865    56778888999887764  45786 467899999999998      47899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .+++++++++||.|++++|+|..+...+...|.+++.++++.++++.++.+++++.. ++++++++++||||||.++|.+
T Consensus        96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~  174 (357)
T PRK14809         96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD  174 (357)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence            999999999999999999999988888888999999999866667788888887765 3578999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|+++|++ +++||+||+|.++.+.+.   .+...+..+++++++||||.|+++|+|+||++++        +++++
T Consensus       175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~--------~~~~~  242 (357)
T PRK14809        175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP--------EEWAD  242 (357)
T ss_pred             HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecC--------HHHHH
Confidence            99999999975 789999999999875432   2223344568999999999999999999999986        35777


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+..... ..+.+.++|.++..++..  ..++++.++.++++++.+.+.|...     . .|.+|+|+|++++       
T Consensus       243 ~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~g~f~~~~~~-------  306 (357)
T PRK14809        243 AYARVNT-PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-----T-WESAGNFVLAEVG-------  306 (357)
T ss_pred             HHHHhCC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-----c-CCCCCCEEEEECC-------
Confidence            7766543 346778888888888864  5778888889999999999988653     1 2567889998874       


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                       +..+++.. ++++||.+.||..|+.++++|++++. .+++++++++|+++++
T Consensus       307 -~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        307 -DASAVAEA-AQERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA  356 (357)
T ss_pred             -CHHHHHHH-HHHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence             35667766 47789999999999878899999874 6899999999998764

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=1.3e-44  Score=366.37  Aligned_cols=356  Identities=15%  Similarity=0.271  Sum_probs=285.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~  119 (421)
                      .++.++|+|+.|++.    +++|+.+++++.+.+.+.   .+  ..|++++++++++|+++++|+..++ ++|++++|++
T Consensus       694 ~~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~  764 (1082)
T PLN02672        694 SQESSLIHMDVDESF----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSL  764 (1082)
T ss_pred             cCCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHH
Confidence            347799999999966    688999999999887553   22  3456789999999999999988765 5899999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCC-CCccc
Q 014631          120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPG-NPCGN  197 (421)
Q Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~-nptG~  197 (421)
                      +++..++.++++|||.|+++.|+|+.|...++..|++++.++++.+++|.+|++++++++++ +.+.+++++|+ ||||.
T Consensus       765 elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~  844 (1082)
T PLN02672        765 ALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGL  844 (1082)
T ss_pred             HHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCc
Confidence            99999999999999999999999999999999999999999987667899999999998865 35678999997 99999


Q ss_pred             ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc--cccc----ccCC---CCCEEEEcccccccCCCCceEEEEEe
Q 014631          198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY--VRMG----VFGS---TVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~----~~~~---~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      +++.+++++|+++|++||++||+||+|+++.|++...  .++.    .++.   ..++++++||||.|+++|+|+||+++
T Consensus       845 v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIa  924 (1082)
T PLN02672        845 LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLAL  924 (1082)
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEe
Confidence            9999999999999999999999999999988876431  1111    1221   23789999999999999999999998


Q ss_pred             eCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHh---hccc---hhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          269 SDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIF---KNTK---EDFFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                      ++       +++++.+...... ..+....+.++..++   ....   ..++.+.++.++++++++.+.|++. |+. +.
T Consensus       925 p~-------~eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~-v~  994 (1082)
T PLN02672        925 ND-------SVLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWD-VL  994 (1082)
T ss_pred             CC-------HHHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-Ee
Confidence            64       2366777654322 233334444444433   2111   3456777888999999999999987 887 55


Q ss_pred             CCCceeEEEEecCccc-------ccC-----CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHH
Q 014631          343 KPEGSMFVMVKLNLSL-------LEG-----ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       343 ~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                      .|++|+|+|+.++...       .+.     ..++.++..+++++.||.+.||..|+.++++||+++.+++++++++++|
T Consensus       995 ~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL 1074 (1082)
T PLN02672        995 EPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAI 1074 (1082)
T ss_pred             cCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHH
Confidence            8999999999764210       000     1246788888888889999999988888999999999999999999999


Q ss_pred             HHHHH
Q 014631          411 KAFCQ  415 (421)
Q Consensus       411 ~~~~~  415 (421)
                      +++.+
T Consensus      1075 ~kf~~ 1079 (1082)
T PLN02672       1075 ARFKE 1079 (1082)
T ss_pred             HHHHH
Confidence            98754

>PLN02397 aspartate transaminase

Probab=100.00  E-value=1.3e-44  Score=346.11  Aligned_cols=371  Identities=16%  Similarity=0.189  Sum_probs=270.5

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCC-CCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGD-PSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      +++..+.++|+.+...++.+.    +...++|+.|. |+..+....-+.+.++..+.+.......|++..|.++||++++
T Consensus        26 ~~~~~~~~~i~~~~~~~~~~~----~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia  101 (423)
T PLN02397         26 HVEPAPPDPILGVTEAFLADP----SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSA  101 (423)
T ss_pred             cCCcCCCChHHHHHHHHhhCC----CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHH
Confidence            344556677888777766433    66789999996 4521111123456666544444344457999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEE--cCCHHHH--HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCH
Q 014631           97 DYLNSELPCKLSPDDVYL--TAGCKQA--IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL  172 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~--~~g~~~a--l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  172 (421)
                      +|+....+....+++|..  +.+++++  +...+..++.|||+|++++|+|+.|...++..|++++.++..+++++++|+
T Consensus       102 ~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~  181 (423)
T PLN02397        102 KLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF  181 (423)
T ss_pred             HHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH
Confidence            999654432333334311  2233233  333333445699999999999999999999999999999874444578999


Q ss_pred             HHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--CcccccccC-CCCCE
Q 014631          173 DGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVFG-STVPV  246 (421)
Q Consensus       173 e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~  246 (421)
                      +.+++.+.   ++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++.  ...++..+. ..+++
T Consensus       182 ~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v  261 (423)
T PLN02397        182 DGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEI  261 (423)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcE
Confidence            98887664   4567788899999999999999999999999999999999999999988541  222332232 23469


Q ss_pred             EEEcccccccCCCCceEEEEE--eeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc--hhH---HHHHH
Q 014631          247 ITLGSMSKRWIVPGWRLGWLV--TSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK--EDF---FSKIV  318 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--~~~---~~~~~  318 (421)
                      |+++||||.|+++|+|+||++  ++.++ ..  ..+.+.+..... ...+++.+.|.++..+|+...  ..+   +++.+
T Consensus       262 I~~~SfSK~~~~~G~RvG~~v~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~  338 (423)
T PLN02397        262 LVAQSYAKNMGLYGERVGALSVVCKSAD-VA--VRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMA  338 (423)
T ss_pred             EEEEECcccCCCccccceEEEEEeCCHH-HH--HHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            999999999999999999986  32211 00  123333433332 234677788988888887521  123   67778


Q ss_pred             HHHHHHHHHHHHHhhcCCC----ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631          319 DILRDTADICYDRIKEIPC----ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI  394 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi  394 (421)
                      ++++++++.+.+.|+++ +    +. ...|++|+|+|+.++          .+++.+|++++||.+.++      +  |+
T Consensus       339 ~~~~~rr~~l~~~L~~~-~~~~~~~-~~~p~gg~fl~~~l~----------~~~~~~Ll~~~~V~v~~~------~--Ri  398 (423)
T PLN02397        339 DRIISMRQKLYDALEAR-GSPGDWS-HITKQIGMFSFTGLN----------KEQVDRMTKEYHIYMTRD------G--RI  398 (423)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCCCCC-cccCCceEEEecCCC----------HHHHHHHHHhCCEEECCC------C--eE
Confidence            89999999999999987 5    66 347999999998773          358889999999999743      1  99


Q ss_pred             Eec-CCHHHHHHHHHHHHHHHH
Q 014631          395 TFA-IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       395 ~~~-~~~e~l~~~~~~l~~~~~  415 (421)
                      +++ .+.+++++++++|++++.
T Consensus       399 ~~~~~~~~~i~~~~~~i~~~~~  420 (423)
T PLN02397        399 SMAGLSSKNVPYLADAIHAVVT  420 (423)
T ss_pred             EEeeCCHHHHHHHHHHHHHHHh
Confidence            997 899999999999999975

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.9e-45  Score=343.54  Aligned_cols=331  Identities=21%  Similarity=0.295  Sum_probs=275.4

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..++++|+.|.+.    +++++.+.+++.+.+..   ..|.+..|.+++|+++++++      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   94 (359)
T PRK03158         28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI   94 (359)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence            4488999999866    45678899999888764   24556678999999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++++++++||+|++++|+|+.+...+...|.++..++.+   ++++|++++++.++++++++++++|+||||.+++.+
T Consensus        95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~  171 (359)
T PRK03158         95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE  171 (359)
T ss_pred             HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999875   356899999998888889999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++.++++.|+ +|+++|+||+|.++.+.+.....+...+..+++++++||||.|+++|+|+||++++        +++++
T Consensus       172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~  242 (359)
T PRK03158        172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS--------EELIE  242 (359)
T ss_pred             HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC--------HHHHH
Confidence            9999998874 69999999999998765543323333344568999999999999999999999985        35777


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+...... .+++.++|.++..+++.  ..+.++.++.++++++.+.+.|.+. ++. + .|.+|+|+|++++.      
T Consensus       243 ~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~~g~~i~~~~~~------  310 (359)
T PRK03158        243 KLNIARPP-FNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPSQTNFIFVDTGR------  310 (359)
T ss_pred             HHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCCcCcEEEEECCC------
Confidence            77666543 46788999999999964  4677788888889999999999887 776 4 45667899988752      


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                       ++.+++..++ ++||.+.||..|+.++++||+++ +.++.++++++|+++
T Consensus       311 -~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~  358 (359)
T PRK03158        311 -DANELFEALL-KKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL  358 (359)
T ss_pred             -CHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence             3567777764 67999999999987889999988 567889999988775

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.5e-44  Score=337.44  Aligned_cols=334  Identities=19%  Similarity=0.333  Sum_probs=271.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..++++|+.|.+.    .++|+.+.+++.+.+..  ...|++ .+.++||+++++|+      ++++++|++|+|+++++
T Consensus        18 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l   84 (354)
T PRK06358         18 KNMILDFSANINP----LGVPESLKQAITENLDK--LVEYPD-PDYLELRKRIASFE------QLDLENVILGNGATELI   84 (354)
T ss_pred             ccceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCC-ccHHHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence            3458999998755    35578899999887754  457865 46889999999998      47899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..+++++ .+ +.|++++|+|+.|...++..|++++.++.+.++++.+| +++++.+.++++++++++||||||.+++.+
T Consensus        85 ~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~  161 (354)
T PRK06358         85 FNIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKE  161 (354)
T ss_pred             HHHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHH
Confidence            9999887 44 68999999999999999999999999998766678889 666666666789999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|+++|++||+++|+||+|.++.+++.....+..++..+++++++||||.|+++|+|+||+++++       +.+.+
T Consensus       162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~-------~~~~~  234 (354)
T PRK06358        162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN-------KNLAE  234 (354)
T ss_pred             HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence            99999999999999999999999998776543334445556789999999999999999999999853       34666


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+..... ..+.+.++|.++..+++.  ..++++.++.++++++.+.+.|++++++. +..|. |.|+|++++.      
T Consensus       235 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~~-g~f~~~~~~~------  303 (354)
T PRK06358        235 KLLQMRE-PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKPS-VNFIFFKLEK------  303 (354)
T ss_pred             HHHHhCC-CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCCc-ceEEEEEcCc------
Confidence            6666554 346788899999888863  45678888999999999999999887876 44565 5589988862      


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                        ..+++..++ ++||.+.||..|+.  ++++|++++.+ ++.+++++.|++++
T Consensus       304 --~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~  353 (354)
T PRK06358        304 --PIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL  353 (354)
T ss_pred             --hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence              456777665 57999999999853  47899998754 55577777777654

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.7e-44  Score=339.97  Aligned_cols=336  Identities=19%  Similarity=0.313  Sum_probs=269.8

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhC--CCCCCCCcEEEcCCHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSVGILPARRAIADYLNSEL--PCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l~~~ia~~l~~~~--~~~~~~~~i~~~~g~~~a  121 (421)
                      .+++|+.|.|.    +++++.+.+++.+.+.... ...|+ ..|.++||+++++|+++.+  |+.+++++|++|+|++++
T Consensus        29 ~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a  103 (374)
T PRK02610         29 QLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL  103 (374)
T ss_pred             ceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence            58999999866    6788999999998877642 34685 4799999999999998876  566889999999999999


Q ss_pred             HHHHHHHhcCCCC-eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeCCCCCcc
Q 014631          122 IQVILTVLARPGA-NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVNPGNPCG  196 (421)
Q Consensus       122 l~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG  196 (421)
                      +..++.+++.+|| +|++++|+|..+...++..|++++.++.+ ++++++|++++++.+.    ++++++++++||||||
T Consensus       104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG  182 (374)
T PRK02610        104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG  182 (374)
T ss_pred             HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence            9988877777886 89999999999999999999999999874 3457899999998875    4789999999999999


Q ss_pred             cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631          197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ  276 (421)
Q Consensus       197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  276 (421)
                      .+++.++++++.++|  +|++||+||+|.++.+.  .  .+..+...+++|+++||||.||++|+|+||++++       
T Consensus       183 ~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~--~--~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~-------  249 (374)
T PRK02610        183 NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT--T--LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH-------  249 (374)
T ss_pred             CCCCHHHHHHHHhcc--CCcEEEEeccccccCcc--c--hHHHHhcCCCEEEEEecchhccCcccceeeeecC-------
Confidence            999999999999987  49999999999987532  1  1223333457899999999999999999999985       


Q ss_pred             HHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631          277 ELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                       +++++.+...... .+.+.+.|.++..+++. .+.+.+..++.++ .++.+.+.|++++++. + .|++|+|+|++++.
T Consensus       250 -~~l~~~l~~~~~~-~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~-~r~~l~~~L~~~~~~~-~-~p~~g~f~~~~l~~  323 (374)
T PRK02610        250 -PELIAVLEKVRLP-YNLPSFSQLAAQLALEH-RQELLAAIPEILQ-ERDRLYQALQELPQLR-V-WPSAANFLYLRLSQ  323 (374)
T ss_pred             -HHHHHHHHHhcCC-CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHH-HHHHHHHHHHhCCCcE-e-CCCcceEEEEeCCC
Confidence             3577777666533 35678899998888864 3445555554444 4777888898887776 4 58889999999874


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                      .     .++.+++.. +.++||.+.++     .+++|++++.+ +++++++++|+++++++
T Consensus       324 ~-----~~~~~~~~~-l~~~gi~v~~~-----~~~lRls~~~~-~~~~~~l~~l~~~l~~~  372 (374)
T PRK02610        324 D-----AALAALHQA-LKAQGTLVRHT-----GGGLRITIGTP-EENQRTLERLQAALTQL  372 (374)
T ss_pred             C-----CCHHHHHHH-HHHCCEEEEeC-----CCeEEEeCCCH-HHHHHHHHHHHHHHhhc
Confidence            2     145666665 47789999864     46899999864 56899999999988764

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=6.1e-44  Score=342.99  Aligned_cols=357  Identities=22%  Similarity=0.305  Sum_probs=272.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..++|+|+.|.|...  .++.+.+.+++.+.+...    ....|++..|.++||+++++|+++.+|+++++++|++|+|+
T Consensus        29 ~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga  106 (416)
T PRK09440         29 TPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGS  106 (416)
T ss_pred             CCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCh
Confidence            467899999998731  123356677777766542    23579999999999999999999989999999999999999


Q ss_pred             HHHHHHHHHHhcC-----CCCeEEE-cCCCCcchHHHHhhcC----ceeEeeeccCCC-CccCCHHHHHhhhccCceEEE
Q 014631          119 KQAIQVILTVLAR-----PGANILL-PKPGFPLYEANARHTR----LEIRHFDLLPEK-GWEVDLDGLEALADENTVAMV  187 (421)
Q Consensus       119 ~~al~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~~g----~~~~~~~~~~~~-~~~~d~e~l~~~~~~~~~~i~  187 (421)
                      ++++.+++.++++     +||.|++ .+|+|+.|...+...+    .....+++..++ ++++|+++++  +.+++++++
T Consensus       107 ~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~  184 (416)
T PRK09440        107 QSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAIC  184 (416)
T ss_pred             HHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEE
Confidence            9999999999984     6899999 7999999987665433    222333332221 4678999987  355778999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +++||||||.+++.+++++|+++|++||++||+||+|..+.... ....... ...+++|+++||||. +++|+|+||++
T Consensus       185 l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~i  261 (416)
T PRK09440        185 VSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATP-LWNPNIILCMSLSKL-GLPGVRCGIVI  261 (416)
T ss_pred             EecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCc-cccCCeEEEeccccc-CCCcceEEEEe
Confidence            99999999999999999999999999999999999997642110 0111111 114689999999997 99999999999


Q ss_pred             eeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccc-hhHHHH-HHHHHHHHHHHHHHHhhcC-CC--cccc
Q 014631          268 TSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTK-EDFFSK-IVDILRDTADICYDRIKEI-PC--ITCP  341 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~~-~g--~~~~  341 (421)
                      ++        +++++.+...... ..+++.+.|.++..+++... ..+..+ .++.++++++.+.+.|.+. ++  +. +
T Consensus       262 ~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~-~  332 (416)
T PRK09440        262 AD--------EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCL-I  332 (416)
T ss_pred             CC--------HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeE-E
Confidence            85        3577777766543 34678899999999997633 233333 5677888888888888753 33  34 3


Q ss_pred             CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---------CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---------KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                      ..|.+|+|+|++++...    .++.++... +.++||.+.||..|+.         .+++|||++.+++++++++++|.+
T Consensus       333 ~~p~gg~fiw~~~~~~~----~~~~~~~~~-l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~  407 (416)
T PRK09440        333 HKPEGAIFLWLWFKDLP----ITTEELYQR-LKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAE  407 (416)
T ss_pred             ecCCCceEEEEECCCCC----CCHHHHHHH-HHHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHH
Confidence            47889999999997421    145666665 4778999999998843         248999998789999999999999


Q ss_pred             HHHHhhhc
Q 014631          413 FCQRHAKQ  420 (421)
Q Consensus       413 ~~~~~~~~  420 (421)
                      ++++..++
T Consensus       408 ~~~~~~~~  415 (416)
T PRK09440        408 EVEKAYAE  415 (416)
T ss_pred             HHHHHhhc
Confidence            99887653

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.1e-43  Score=331.87  Aligned_cols=334  Identities=19%  Similarity=0.327  Sum_probs=267.3

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++++|+.|.+.    +++|+.+++++.+.+..  ...|++ .++.++|+++++++      ++++++|++|+|+++++
T Consensus        19 ~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l   85 (356)
T PRK08056         19 PDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETESI   85 (356)
T ss_pred             hhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            5678999999855    57889999999887764  346765 46899999999998      47899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..+++++ .+|+ +++.+|+|..|...++..|.+++.++.++++++.+| +++++.+.++++++++++||||||..++.+
T Consensus        86 ~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~  162 (356)
T PRK08056         86 FAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQ  162 (356)
T ss_pred             HHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHH
Confidence            9999887 6775 777899999999999999999999998766677776 455565667889999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|+++|+++|++||+||+|.++.+.+....+.  +...+++++++||||.|+++|+|+||+++++       +++++
T Consensus       163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~-------~~~~~  233 (356)
T PRK08056        163 LLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSD-------DAAVA  233 (356)
T ss_pred             HHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence            99999999999999999999999987655322222  2234578999999999999999999999853       24556


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+..... ..+++.+.|.++..+++.  ..+..+.++.++++++.+.+.|++++++. + .|.+++|+|++++.      
T Consensus       234 ~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~------  302 (356)
T PRK08056        234 RMRRQQM-PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLT-V-WPGRANYLFLRCER------  302 (356)
T ss_pred             HHHHhCC-CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCCCCcEEEEEcCC------
Confidence            6655433 245677888888888853  56677888899999999999999887876 4 35568899998863      


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                       +..+++..++ ++||.+.+|..|..  .+++||+++. .++.+.+++.|+++++
T Consensus       303 -~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~  354 (356)
T PRK08056        303 -PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVLT  354 (356)
T ss_pred             -ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHHc
Confidence             3456777665 68999999998843  4699999984 4666777777777653

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.6e-43  Score=333.17  Aligned_cols=333  Identities=22%  Similarity=0.331  Sum_probs=267.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +..+++|+.|.+.    +.+++.+.+++.+....  ...|++..| .++|+++++++      ++++++|++|+|+++++
T Consensus        35 ~~~~i~l~~~~~~----~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l  101 (371)
T PRK05166         35 VPRIAKLGSNENP----LGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLI  101 (371)
T ss_pred             CcceEEcCCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            5689999999865    35678888888876543  457988888 59999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++.+++++||.|+++.|+|..+...++..|.+++.++.+.  ++++|++++++.++++++++++++|+||||.+++.+
T Consensus       102 ~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~  179 (371)
T PRK05166        102 AVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD  179 (371)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999999999999999998753  457899999998888889999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++++|+++|++ ++++|+||+|.++.+++.....+..+. ..+++|+++||||.|+++|+|+||+++++       +++.
T Consensus       180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~-------~~l~  251 (371)
T PRK05166        180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD-------PELV  251 (371)
T ss_pred             HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC-------HHHH
Confidence            99999999875 889999999999885443222222222 23579999999999999999999988753       3566


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+++.++|.++..++..  ..++++..+.++++++.+.+.|++. ++. + .|.+|+|+|++++.     
T Consensus       252 ~~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~~g~fl~~~~~~-----  320 (371)
T PRK05166        252 GLLDRVRTP-FNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-GYR-I-APSRANFLFFDARR-----  320 (371)
T ss_pred             HHHHHhccC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCCcCCEEEEeCCC-----
Confidence            666655433 46788888888887754  4678888899999999999999987 776 4 56678899998753     


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                        ++.++...++ ++||.+.||..++..+++|++++. .++.+++.+.|+++
T Consensus       321 --~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~-~~~~~~l~~~l~~i  368 (371)
T PRK05166        321 --PASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGS-PEENDHFVAALDKV  368 (371)
T ss_pred             --CHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCC-HHHHHHHHHHHHHH
Confidence              3567777665 569999999877778899999995 33345555555444

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-42  Score=330.62  Aligned_cols=358  Identities=17%  Similarity=0.222  Sum_probs=264.8

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC---CCcEEEcCCHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS---PDDVYLTAGCKQA  121 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~---~~~i~~~~g~~~a  121 (421)
                      ..++.++|...........+.+.+++.+. .......|+++.|.++||+++++++.+.++ ...   .++|++|+|++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~a   81 (388)
T PRK08637          4 TKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHG   81 (388)
T ss_pred             cceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHH
Confidence            44677777654322222333444433332 223456899999999999999999987553 232   3678999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHH-hhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeCCCCCcc
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANA-RHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVNPGNPCG  196 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG  196 (421)
                      +..++.+++++||.|++++|+|+.+...+ ...|++++.+++..+ ++++|++++++.++    +.+.++++++||||||
T Consensus        82 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG  160 (388)
T PRK08637         82 LSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPNNPTG  160 (388)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCC
Confidence            99999999999999999999999998875 468999999987422 34689999988776    4455677889999999


Q ss_pred             cccCHHHHHHHHHHHHh-----cCcEEEEcccccccccCCCCcccc-ccc-CCCCCE--EEEcccccccCCCCceEEEEE
Q 014631          197 NVFTYQQLQKIAEKARK-----LGIMVISDEVYDHLTFGSTPYVRM-GVF-GSTVPV--ITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       197 ~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~-~~~-~~~~~~--i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      .+++.+++++|+++|++     ||++||+||+|.++.+++....++ ..+ +..+++  ++++|+||.|++||+|+||++
T Consensus       161 ~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~  240 (388)
T PRK08637        161 YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFIT  240 (388)
T ss_pred             CCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEE
Confidence            99999999999999875     899999999999998877543332 222 334464  445699999999999999999


Q ss_pred             eeCCCcchhHHHHHHHHhhh----c-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcC---CCc
Q 014631          268 TSDPSGILQELRIVDSIKGY----L-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEI---PCI  338 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~---~g~  338 (421)
                      ++.+.+  .++++.+.+...    . ....++|.+.|.++..+|+... ..+..+.+..++++++.+.+.|++.   +++
T Consensus       241 ~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~  318 (388)
T PRK08637        241 FGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAW  318 (388)
T ss_pred             EccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence            753100  012455555431    1 1234678899999999997522 2344555667888888888888754   256


Q ss_pred             cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631          339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~  417 (421)
                      . +..|++|+|+|++++..      ++.+++..+++++||.+.+.    .++++|++++ .+.+++++++++|.++++.+
T Consensus       319 ~-~~~~~~g~~~~~~l~~~------~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~  387 (388)
T PRK08637        319 Q-AYPFNSGYFMCLKLKGV------DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL  387 (388)
T ss_pred             c-cccccceEEEEecCChH------HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence            6 45788999999998621      35678887777889988753    2578999998 68999999999999998765


Q ss_pred             h
Q 014631          418 A  418 (421)
Q Consensus       418 ~  418 (421)
                      +
T Consensus       388 ~  388 (388)
T PRK08637        388 R  388 (388)
T ss_pred             C
Confidence            3

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.7e-43  Score=331.39  Aligned_cols=335  Identities=20%  Similarity=0.326  Sum_probs=270.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS--AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..++|+.|.+.    +++++.+.+++.+.+..  .....|++ .|.++||+++++|+++.+|.++++++|++|+|+++++
T Consensus        27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l  101 (368)
T PRK03317         27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL  101 (368)
T ss_pred             ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence            56999999866    58889999999988753  23457854 6889999999999999889889999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~  201 (421)
                      .+++++++++||.|+++.|+|..+...+...|.+++.++.  ++++++|++++++.+. .+++++++++|+||||.+++.
T Consensus       102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~  179 (368)
T PRK03317        102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL  179 (368)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999999999989988777764  3467899999999886 467889999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|+++|   ++++|+||+|+++.+.+.. ......+..+++++++||||.|+++|+|+||++++        ++++
T Consensus       180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~--------~~~~  247 (368)
T PRK03317        180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA--------PAVV  247 (368)
T ss_pred             HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC--------HHHH
Confidence            9999888877   6899999999998765532 22222233457899999999999999999999985        4677


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+..... ..+.+++.|.++.++++.  ...+.+..++++++++.+.+.|++. |+. +..|.+++++|..++      
T Consensus       248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~------  316 (368)
T PRK03317        248 DALRLVRL-PYHLSAVTQAAARAALRH--ADELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLFGRFA------  316 (368)
T ss_pred             HHHHhcCC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEEeccC------
Confidence            77766553 346788999998888864  2344455677888899999999887 777 446777777775553      


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                        +...+...+ .++||.+.+.   +.++++|++++ +.+++++++++|++++..
T Consensus       317 --~~~~~~~~l-~~~Gv~v~~~---~~~~~iRi~~~-~~~~~~~~~~~l~~~~~~  364 (368)
T PRK03317        317 --DRHAVWQGL-LDRGVLIRDV---GIPGWLRVTIG-TPEENDAFLAALAEVLAT  364 (368)
T ss_pred             --CHHHHHHHH-HHCCEEEEeC---CCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence              345565554 6789999874   34689999997 457889999999888754

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=9.6e-43  Score=328.11  Aligned_cols=329  Identities=17%  Similarity=0.279  Sum_probs=259.4

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..++++|+.|.+.    +++++.+.+++.+.+..  ...|++. +..+||+++|+|+      ++++++|++|+|+++++
T Consensus        21 ~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~i   87 (360)
T PRK07392         21 PDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAELL   87 (360)
T ss_pred             cccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            4578999998744    57788999998887764  4578765 4689999999998      47899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCc---cCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGW---EVDLDGLEALADENTVAMVIVNPGNPCGNVF  199 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~  199 (421)
                      ..+++++. +||.|++++|+|..+...++..|.+++.++.+.++++   ..+++++++.. ++++++++++||||||.++
T Consensus        88 ~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~  165 (360)
T PRK07392         88 TWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLW  165 (360)
T ss_pred             HHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCc
Confidence            99998875 6899999999999999999999999999998765543   24566665543 4678899999999999999


Q ss_pred             CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      +.+++.+   +++++++ +|+||+|.++.+.+.....+..++..+++++++||||.|+++|+|+||++++        ++
T Consensus       166 ~~~~l~~---l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~--------~~  233 (360)
T PRK07392        166 SREAILP---LLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH--------PD  233 (360)
T ss_pred             CHHHHHH---HHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC--------HH
Confidence            9766554   5567785 6669999999876542222233445568999999999999999999999986        34


Q ss_pred             HHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      +++.+..... ..+++.+.|.++..+++.  ..+.+..++.++++++.+.+.|++++++. + .|.+++|+|++++.   
T Consensus       234 ~~~~~~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~fl~~~~~~---  305 (360)
T PRK07392        234 RLQRWQQWRD-PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPSAANFLLVQSQG---  305 (360)
T ss_pred             HHHHHHhhCC-CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCCEEEEEcCC---
Confidence            6666665443 246888999999999974  45666677788999999999999888887 4 45778999988763   


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCH--HHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEP--SALEEGLGRI  410 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~--e~l~~~~~~l  410 (421)
                          ++.++...+++++||.+.||..|+.  ++++||+++...  +++.++++++
T Consensus       306 ----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~  356 (360)
T PRK07392        306 ----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI  356 (360)
T ss_pred             ----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence                3667777777888999999999864  479999998643  4666655553

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-42  Score=329.12  Aligned_cols=327  Identities=19%  Similarity=0.319  Sum_probs=264.4

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++|+|+.|.+.    +++++.+++++.+..   ..+.|++ .+..+||+++++++      ++++++|++|+|+++++
T Consensus        51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i  116 (380)
T PLN03026         51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI  116 (380)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence            5689999999855    467777888886531   2245754 46799999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ..++.+++++||+|++++|+|..|...++..|++++.++.+  +++++|++++++.+ .++++++++++|+||||.+++.
T Consensus       117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~  194 (380)
T PLN03026        117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD  194 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999988899999999998874  35779999999988 6789999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|++.+    +++|+||+|.++.+.+..   ....+..+++++++||||.|+++|+|+||++++        ++++
T Consensus       195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~--------~~~i  259 (380)
T PLN03026        195 DDLLKILELP----ILVVLDEAYIEFSTQESR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSII  259 (380)
T ss_pred             HHHHHHHhcC----CEEEEECcchhhcCCcch---HHHHHhCCCEEEEecchHhhcCccccceeeecC--------HHHH
Confidence            9999888753    899999999998754321   222334568999999999999999999999985        3577


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+.+.++|.++.++|+.  ..++++.++.++++++.+.+.|++++++. + .|.+++|+|+.++..    
T Consensus       260 ~~l~~~~~~-~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~~~~f~~~~~~~~----  330 (380)
T PLN03026        260 EYLWRAKQP-YNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPSDANFILCRVTSG----  330 (380)
T ss_pred             HHHHHhcCC-CCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCCCCeEEEEECCCC----
Confidence            777666543 46778889998888864  46788889999999999999999885454 4 678899999988632    


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                       .++.++...++ ++||.++++..++..+++|||++. .++.+++++.|++
T Consensus       331 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~  378 (380)
T PLN03026        331 -RDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ  378 (380)
T ss_pred             -CCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence             14567777665 789999998766557899999984 4566777776654

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.4e-42  Score=328.56  Aligned_cols=335  Identities=20%  Similarity=0.308  Sum_probs=275.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++++|+.|.+.    +++++.+.+++.+.+..  ...|++.. ..++|+++++++      ++++++|++|+|+++++
T Consensus        31 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   97 (367)
T PRK02731         31 IADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEIL   97 (367)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            6789999999865    34578889999888764  45787654 479999999998      46788999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++.+++++||+|++++|+|..+...+...|.+++.++.   +++++|++++++.++++++++++++|+||||.+++.+
T Consensus        98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~  174 (367)
T PRK02731         98 ELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAE  174 (367)
T ss_pred             HHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHH
Confidence            9999999999999999999999888888899999998876   3467899999999888889999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      +++++++.|+ +|+++|+||+|..+.+.+.....+..++..+++++++||||.|+++|+|+||++++        +++++
T Consensus       175 ~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~--------~~~~~  245 (367)
T PRK02731        175 EVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP--------PEIID  245 (367)
T ss_pred             HHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC--------HHHHH
Confidence            9999999875 69999999999988765543333333344567999999999999999999999986        35677


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+...... .+.+.+.|.++..+++.  ..++++.++.++++++.+.+.|++. |+. + .|.+|+|+|++++..     
T Consensus       246 ~l~~~~~~-~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~g~~~~i~~~~~-----  314 (367)
T PRK02731        246 ALNRVRQP-FNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPSVGNFILVDFDDG-----  314 (367)
T ss_pred             HHHHccCC-CCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCceEEEEECCCC-----
Confidence            77665443 35677889998888864  5677888889999999999999987 777 4 355688999988532     


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      .++.++...| .++||.+.++..|+.++++|++++ +.++++++++.|+++++
T Consensus       315 ~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        315 KDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLA  365 (367)
T ss_pred             CCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence            2466777765 568999999988876789999997 56788999999998864

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.3e-43  Score=328.37  Aligned_cols=327  Identities=21%  Similarity=0.318  Sum_probs=267.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a  121 (421)
                      +.++++|+.|.+.    +++++.+++++.+.+.......|++ .|.+++|+++++|++      ..+ ++|++|+|++++
T Consensus        25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~   93 (356)
T PRK04870         25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL   93 (356)
T ss_pred             CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence            5689999999865    6889999999999887544567876 678999999999984      333 589999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccC
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~  200 (421)
                      +..++.+++++||+|++++|+|..+...++..|++++.++++  +++++|++++++.+. .+++++++++||||||.+++
T Consensus        94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~  171 (356)
T PRK04870         94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD  171 (356)
T ss_pred             HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999875  347799999999885 47899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      .+++++|+++|   +.++|+||+|..+...  ...+  .+...+++++++|||| ++++|+|+||++++        +++
T Consensus       172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~--~~~~--~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~--------~~~  235 (356)
T PRK04870        172 DADVERIIEAA---PGLVVVDEAYQPFAGD--SWLP--RLARFPNLLVMRTVSK-LGLAGLRLGYLAGH--------PAW  235 (356)
T ss_pred             HHHHHHHHHHC---CCEEEEECCchhhcCc--chHH--HHhhCCCEEEEecchh-hhhHHHhhhhhhCC--------HHH
Confidence            99999999998   6789999999987532  1111  2234457999999999 79999999999985        356


Q ss_pred             HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      ++.+...... .+.+.+.|.++..+++.  ...+++.+++++++++.+.+.|++++++. + .|.+++|+|++++     
T Consensus       236 i~~~~~~~~~-~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~-----  305 (356)
T PRK04870        236 IAELDKVRPP-YNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPSAANFILVRVP-----  305 (356)
T ss_pred             HHHHHHccCC-CcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC-----
Confidence            7777665532 35777888888777764  34578888899999999999999888886 4 4667789999886     


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                         +..++.. +++++||.|.+|..|+.  .+++|++++. .++.++++++|.++
T Consensus       306 ---~~~~~~~-~l~~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~  355 (356)
T PRK04870        306 ---DAAAVFD-GLKTRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA  355 (356)
T ss_pred             ---CHHHHHH-HHHHCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence               2455554 55788999999988853  5799999994 57778888888765

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=2e-42  Score=318.94  Aligned_cols=332  Identities=20%  Similarity=0.386  Sum_probs=279.2

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      ..+++|+.+.-.    +++++.+++++.+.+..  ++.|++. ...+++++++++++.     .++++|++++|+++.+.
T Consensus        22 ~~~i~LssNenP----~gp~~~~~~~~~~~~~~--~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i~   89 (356)
T COG0079          22 PGIIKLSSNENP----YGPPPKVIEAIRAALDK--LNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELIE   89 (356)
T ss_pred             ccceeecCCCCC----CCCCHHHHHHHHHHHHh--hccCCCC-cHHHHHHHHHHHhCC-----CCcceEEEcCChHHHHH
Confidence            368999988733    47779999999888773  5688766 579999999999842     67899999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      .++++++.+||+|+++.|+|..|...++..|++++.++..+   |.+|++.+.+.+.++++++++||||||||..++.++
T Consensus        90 ~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~  166 (356)
T COG0079          90 LLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREE  166 (356)
T ss_pred             HHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHH
Confidence            99999999999999999999999999999999999998754   789999999998888999999999999999999999


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      ++++.+.+.+ +.++|+||+|.+|..  .....  .....+++++++||||+||++|+|+||++++        +++++.
T Consensus       167 l~~l~~~~~~-~~~vVvDEAY~eF~~--~~~~~--l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~--------~~~i~~  233 (356)
T COG0079         167 LRALLEALPE-GGLVVIDEAYIEFSP--ESSLE--LLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN--------PELIAA  233 (356)
T ss_pred             HHHHHHhCCC-CcEEEEeCchhhcCC--chhhh--hccCCCCEEEEEecHHhhhcchhceeeccCC--------HHHHHH
Confidence            9999999988 999999999999763  22222  2224567999999999999999999998875        579999


Q ss_pred             HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631          284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS  363 (421)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (421)
                      +.+.+..+ +.|.+++.++.++++.  .+++++..+.....++++.+.|++++ +..+ .|+.++|++++++..      
T Consensus       234 l~~vr~p~-~v~~~a~~aa~aal~~--~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS~aNFvlv~~~~~------  302 (356)
T COG0079         234 LNKVRPPF-NVSSPALAAAIAALRD--ADYLEESVERIREERERLYAALKALG-LFGV-FPSQANFVLVRVPDA------  302 (356)
T ss_pred             HHHhcCCC-CCCHHHHHHHHHHccc--HHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCCCCcEEEEECCCc------
Confidence            99998754 7888999999999975  48899999999999999999999984 4413 677799999998741      


Q ss_pred             ChHHHHHHHHhhcCeeEEeCCC-CCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          364 DDMEFALQLAKEESVIVLPGMA-VGMKNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       364 ~~~~~~~~ll~~~gv~v~~g~~-~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                      ....+... +.++||+++.... ...++++||++++.+|. ++++++|.++++.
T Consensus       303 ~~~~l~~~-L~~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~  354 (356)
T COG0079         303 EAAALAEA-LLKKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG  354 (356)
T ss_pred             cHHHHHHH-HHHCCEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence            22345554 4667999999865 22367999999987777 9999999988764

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.3e-42  Score=323.55  Aligned_cols=336  Identities=18%  Similarity=0.266  Sum_probs=272.4

Q ss_pred             CCCe-eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           43 PRPI-IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~-i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      |.++ ++|+.|++.    +++++.+.+++.+.+..  ...|++. +..+||+++|+++      ++++++|++|+|++++
T Consensus        30 g~~~~~~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~   96 (369)
T PRK08153         30 GRPFRARIGANESG----FGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGL   96 (369)
T ss_pred             CCcceeEecCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHH
Confidence            5554 699999865    67888999999887653  3468765 4799999999998      4788999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccCceEEEEeCCCCCcccccC
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~  200 (421)
                      +..++.+++++||.|++++|+|+.+...+...|.+++.+|.+.+   .+|++++++.+ .++++++++++|+||||.++|
T Consensus        97 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~  173 (369)
T PRK08153         97 LGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHP  173 (369)
T ss_pred             HHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999999888889999998887432   47899987765 457889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      .+++++|+++|+ +|++||+||+|..+.+++. ..++..  ..+++++++||||.|+++|+|+||++++        +++
T Consensus       174 ~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~--------~~~  241 (369)
T PRK08153        174 AADIVAFIEALP-ETTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGA--------PGT  241 (369)
T ss_pred             HHHHHHHHHhCC-CCcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecC--------HHH
Confidence            999999999887 4999999999999876543 223222  2357999999999999999999999985        357


Q ss_pred             HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      ++.+...... .+.+.++|.++.++|+.  ..++++.++.++++++.+.+.|++. |+. . .|.+++|+|+.++...  
T Consensus       242 ~~~l~~~~~~-~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~-~p~~~~f~~~~~~~~~--  313 (369)
T PRK08153        242 IKAFDKVRNH-FGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN-GLT-P-LPSATNFVAIDCGRDG--  313 (369)
T ss_pred             HHHHHHhhcC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCcCcEEEEECCCCc--
Confidence            7777665543 46889999999999963  5678888899999999999999876 766 4 4788999998875211  


Q ss_pred             CCCChHHHHHHHHhhcCeeEE-eCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          361 GISDDMEFALQLAKEESVIVL-PGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                        .....+..++ .++||.+. |+.. ...+++|++++ ++++++.+++.|.++++.+++
T Consensus       314 --~~a~~l~~~l-~~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~~  368 (369)
T PRK08153        314 --AFARAVLDGL-IARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAARK  368 (369)
T ss_pred             --ccHHHHHHHH-HHCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence              1345666655 56799995 6543 23569999998 678999999999999987664

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4e-42  Score=323.83  Aligned_cols=328  Identities=17%  Similarity=0.316  Sum_probs=263.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++|+|+.|.+.    +++++.+.+++.+.+... ...|++. +.++||+++|+++      ++++++|++|+|+++++
T Consensus        23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al   90 (353)
T PRK05387         23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL   90 (353)
T ss_pred             ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence            4578999999966    466788999998877643 3578654 6699999999998      47889999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++++++++||+|++++|+|..+...++..|.+++.++.+  +++++|++++++    .++++++++||||||.++|.+
T Consensus        91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~  164 (353)
T PRK05387         91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA  164 (353)
T ss_pred             HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999998899999999998874  356789998864    356789999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|+++++  |+++|+||+|..+.  +....++  .+..+++++++||||.|+++|+|+||++++        +++.+
T Consensus       165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~~~  230 (353)
T PRK05387        165 EIERILAANP--DSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGH--------PELIE  230 (353)
T ss_pred             HHHHHHHhCC--CcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecC--------HHHHH
Confidence            9999998654  99999999998753  3322222  233467899999999999999999999985        35677


Q ss_pred             HHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          283 SIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       283 ~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      .+......  ..+.+.+.|.++..++..  ..++++.+++++++++.+.+.|+++ |+. + .|.+++|+|+.++.    
T Consensus       231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~----  301 (353)
T PRK05387        231 ALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEAL-GFE-V-LPSKANFVFARHPS----  301 (353)
T ss_pred             HHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCcCcEEEEECCC----
Confidence            77665432  235778899998888864  4667788889999999999999987 776 4 46678899988763    


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                        .+..++...+ .++||.+.+.......+++|++++ +.+++++++++|++++.
T Consensus       302 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        302 --HDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA  352 (353)
T ss_pred             --CCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence              1466777665 677999986433333579999998 56899999999998764

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=5.5e-42  Score=322.83  Aligned_cols=325  Identities=17%  Similarity=0.215  Sum_probs=260.9

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      +++++|+.|.+.    +++|+.+.+++.+.+...  ..|++.. ..+||+++++++      ++++++|++|+|+++++.
T Consensus        43 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~--~~Y~~~~-~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~  109 (370)
T PRK09105         43 EGAVFLNANECP----LGPSPAARDAAARSAALS--GRYDLEL-EDDLRTLFAAQE------GLPADHVMAYAGSSEPLN  109 (370)
T ss_pred             CCcEEecCCCCC----CCCCHHHHHHHHHHHHHh--cCCCCch-HHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence            568999999865    578899999998887542  4686554 789999999987      478999999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      .++.+++++||+|++++|+|..+...++..|.+++.++.+.  ++.+|++++++. .++++++++++||||||.+++.++
T Consensus       110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~  186 (370)
T PRK09105        110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD  186 (370)
T ss_pred             HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence            99999999999999999999999999999999999998753  467899999876 457889999999999999999999


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      ++++++.++ +|+++|+||+|..+..  .. ......+..+++++++||||.||++|+|+||++++        +++++.
T Consensus       187 l~~l~~~~~-~~~~lIvDEaY~~f~~--~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~--------~~~i~~  254 (370)
T PRK09105        187 IEWLLANKP-AGSVLLVDEAYIHFSD--AP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR--------PDLLAK  254 (370)
T ss_pred             HHHHHHhCC-CCcEEEEECchHHhcc--Cc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecC--------HHHHHH
Confidence            999999764 5999999999987642  11 11112233568999999999999999999999985        356677


Q ss_pred             HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631          284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS  363 (421)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (421)
                      +... . ...++.+.+.++..++..  ..++++.+++++++++.+.+.|+++ ++. +..|++++| +++++.       
T Consensus       255 l~~~-~-~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~~f~-~~~~~~-------  320 (370)
T PRK09105        255 LARF-G-HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPSQANCF-MVDVKR-------  320 (370)
T ss_pred             HHhc-C-CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCCCCcEE-EEeCCC-------
Confidence            6665 2 235777888888888864  5778888899999999999999987 777 446666654 566642       


Q ss_pred             ChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          364 DDMEFALQLAKEESVIVLPGMAVG-MKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       364 ~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      +..++...|+ ++||.+.  ..|. .++++|++++. +++++++++.|++++
T Consensus       321 ~~~~l~~~L~-~~gI~v~--~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~  368 (370)
T PRK09105        321 PAKAVADAMA-KQGVFIG--RSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM  368 (370)
T ss_pred             CHHHHHHHHH-HCCcEEe--cCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence            4567777775 5599983  3343 36899999984 577888888888765

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2e-41  Score=317.85  Aligned_cols=327  Identities=19%  Similarity=0.315  Sum_probs=260.9

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      ...++|+.|.+.    +++|+.+.+++.+.+.......|++. +..++|+++|+++      ++++++|++|+|+++++.
T Consensus        22 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~   90 (351)
T PRK14807         22 PYKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEIIH   90 (351)
T ss_pred             CceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHHH
Confidence            356899999875    67889999999988765445678654 4689999999997      477899999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .++.+++++||+|++++|+|..+...++..|++++.++.+  +++++|++++++.+++ +++++++++|+||||.+++.+
T Consensus        91 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~  168 (351)
T PRK14807         91 LIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERE  168 (351)
T ss_pred             HHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999999899999999998875  3467999999998865 789999999999999999988


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      +++++++   +++.++|+||+|.++.  +....+  ..+..+++++++||||.|+++|+|+||++++        +++++
T Consensus       169 ~l~~l~~---~~~~~~ivDe~y~~~~--~~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~--------~~~~~  233 (351)
T PRK14807        169 DIIKIIE---KSRGIVVVDEAYFEFY--GNTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVAN--------ENILK  233 (351)
T ss_pred             HHHHHHH---hCCCEEEEeCcchhhc--ccchHH--HhhhCCCEEEEecchHhcccchhceeeeecC--------HHHHH
Confidence            8777765   5567899999998863  332222  1233468999999999999999999999985        35777


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+...... .+.+.+.|.++..+++.   .++++..+.++++++.+.+.|++++|+. + .|.+|+|+|++++       
T Consensus       234 ~~~~~~~~-~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~~~~~~~i~~~-------  300 (351)
T PRK14807        234 YLNLVKSP-YNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIK-V-YPSKTNFILVKFK-------  300 (351)
T ss_pred             HHHHccCC-CCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcCCccEEEEEcC-------
Confidence            77665443 45678899999888864   4567777788899999999998888887 4 4566889998886       


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCC-CCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMA-VGMKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~-~~~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                       +...+... +.++||.+.++.. ++..+++|++++.. ++.+++++.|++++
T Consensus       301 -~~~~~~~~-l~~~gV~v~~~~~~~~~~~~iRis~~~~-~~~~~l~~~l~~~~  350 (351)
T PRK14807        301 -DADYVYQG-LLERGILVRDFSKVEGLEGALRITVSSC-EANDYLINGLKELL  350 (351)
T ss_pred             -CHHHHHHH-HHHCCEEEEECCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHhh
Confidence             34555555 4567999988653 34468999999853 55677777777653

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=1.8e-41  Score=318.44  Aligned_cols=328  Identities=22%  Similarity=0.411  Sum_probs=268.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .+.++|+|++|.+.    ++.|+.+.+++.++...  ...|++..+ +++|++++++++      +++++|++|+|++++
T Consensus        17 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~G~~~~   83 (346)
T TIGR01141        17 GGKEVIKLNSNENP----FGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYYG------VDPEQILLGNGSDEI   83 (346)
T ss_pred             CCCceEEccCCCCC----CCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHhC------cChHHEEEcCCHHHH
Confidence            35689999999965    57788899999988653  357876665 999999999983      678899999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +..++.++.++||+|++++|+|..+...++..|.+++.++.+.+  +.+|++++++.+.++++++++++|+||||..++.
T Consensus        84 l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~  161 (346)
T TIGR01141        84 IELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSR  161 (346)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999888888999999999987543  5689999999888889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++++++++.++ +|+++|+|++|+.+...+. ..+  .....+++++++|+||+|+++|+|+||++++        +++.
T Consensus       162 ~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~  229 (346)
T TIGR01141       162 SDIEAVLERTP-EDALVVVDEAYGEFSGEPS-TLP--LLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN--------AEII  229 (346)
T ss_pred             HHHHHHHHhCC-CCcEEEEECchhhhcCCcc-HHH--HHhhCCCEEEEehhhHhhhchhhhceeeecC--------HHHH
Confidence            99999999887 7999999999997664322 112  1222346899999999999999999999985        3577


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+.+.+.|.++..+++.  ..++++.+++++++++.+.+.|++++|+. + .|.+++|+|+.++.     
T Consensus       230 ~~~~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~g~~~~~~~~~-----  299 (346)
T TIGR01141       230 DALNKVRAP-FNLSRLAQAAAIAALRD--DDFIEKTVEEINAERERLYDGLKKLPGLE-V-YPSDANFVLIRFPR-----  299 (346)
T ss_pred             HHHHhccCC-CCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCCcCCEEEEecCC-----
Confidence            777665433 35678888888888864  23678888999999999999999888887 4 45668899988863     


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEecCCHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                        +..++...| .++||.+.||..|+. .+++|+|++ ++++++++++.|
T Consensus       300 --~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l  345 (346)
T TIGR01141       300 --DADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL  345 (346)
T ss_pred             --CHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence              356677665 567999999988744 689999988 678899998876

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=1e-40  Score=313.23  Aligned_cols=324  Identities=16%  Similarity=0.208  Sum_probs=256.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.+++||+.|.+.    +++++.+++++.+.+..  ...|++..|.+++|+++++++      ++++++|++|+|+++++
T Consensus        21 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al   88 (349)
T PRK07908         21 GPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF   88 (349)
T ss_pred             CCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            6789999999855    57788899999988764  357988889999999999998      46899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .++++  +++ +.++++.|+|..+...++..|.+++.++++.  ++++|++.+    .++++++++++|+||||.++|.+
T Consensus        89 ~~~~~--l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~  159 (349)
T PRK07908         89 ALLAR--LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE  159 (349)
T ss_pred             HHHHh--cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence            99988  466 4677889999999999999999999998753  367888755    35678899999999999999977


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++.+   +|+ ++.++|+||+|+++.. +. ..++...+ .+++++++||||.|+++|+|+||++++        +++++
T Consensus       160 ~l~~---l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~~-~~~~i~i~S~SK~~~l~GlRiG~~~~~--------~~~~~  224 (349)
T PRK07908        160 QLLA---LRR-PGRILVVDEAFADAVP-GE-PESLAGDD-LPGVLVLRSLTKTWSLAGLRVGYALGA--------PDVLA  224 (349)
T ss_pred             HHHH---HHh-cCCEEEEECcchhhcc-CC-cccccccc-CCCEEEEeecccccCCccceeeeeecC--------HHHHH
Confidence            6554   554 4778889999998753 32 23433332 347899999999999999999999985        35777


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+...... ...+++.+.++..+++.....++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.      
T Consensus       225 ~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~~~~~~~~~------  295 (349)
T PRK07908        225 RLTRGRAH-WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPAAAPFVLVRVPD------  295 (349)
T ss_pred             HHHhcCCC-CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCCCceEEEEECCc------
Confidence            77665443 34566777777777763335678888999999999999999987 777 5577889999998862      


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                        .. .+..+++++||.+.||..|..  ++++|||++ +++++++++++|++++.
T Consensus       296 --~~-~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        296 --AE-LLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK  346 (349)
T ss_pred             --HH-HHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence              33 445566888999999998853  689999996 55678888888887654

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-41  Score=296.16  Aligned_cols=329  Identities=22%  Similarity=0.386  Sum_probs=275.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCC--CCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH-hhcCce
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPC--KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA-RHTRLE  156 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~--~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~  156 (421)
                      ..|.+..|++++|+++|+++.+.+|-  ..+|+++++++|+|.+++.+...|.+|||..+++.|.|+++..-+ -..|++
T Consensus       115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve  194 (471)
T KOG0256|consen  115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE  194 (471)
T ss_pred             hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence            46788899999999999999986653  458899999999999999999999999999999999999985443 467999


Q ss_pred             eEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC
Q 014631          157 IRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG  230 (421)
Q Consensus       157 ~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~  230 (421)
                      ++++.....++++++++++|+++.+      +.++++++||+||-|++++++++..++++|.++|+.+|+||+|+.-+|+
T Consensus       195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~  274 (471)
T KOG0256|consen  195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFD  274 (471)
T ss_pred             EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccC
Confidence            9999998889999999999987743      6789999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccccC-----CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHH
Q 014631          231 STPYVRMGVFG-----STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI  305 (421)
Q Consensus       231 ~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (421)
                      ...+.++..+.     ..+++-++.|+||-||+||+|+|.++..+       ..+.....+... ++..++..|+.+...
T Consensus       275 ~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n-------e~VvsaA~kmss-f~~vSs~tQ~~la~L  346 (471)
T KOG0256|consen  275 KSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN-------EDVVSAATKMSS-FGLVSSQTQYLLASL  346 (471)
T ss_pred             ccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC-------hHHHHHHHHHhh-ccCCcHHHHHHHHHH
Confidence            88877765542     34568888999999999999999999865       346665555544 357888999999999


Q ss_pred             hhccc--hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC-CCChHHHHHHHHhhcCeeEEe
Q 014631          306 FKNTK--EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG-ISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       306 l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      |++..  +.++.+..++++.+..++.+.|+++ ||.+. ...+|+|+|+.+...-... .....++...++.+-++-+.|
T Consensus       347 LSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSp  424 (471)
T KOG0256|consen  347 LSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSP  424 (471)
T ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCC
Confidence            98733  6788899999999999999999998 88855 7888999999986542211 112346667777777999999


Q ss_pred             CCCCCC--CCeEEEEecCCHHHHHH-HHHHHHHHHHHhh
Q 014631          383 GMAVGM--KNWLRITFAIEPSALEE-GLGRIKAFCQRHA  418 (421)
Q Consensus       383 g~~~~~--~~~iRi~~~~~~e~l~~-~~~~l~~~~~~~~  418 (421)
                      |..|..  ++|+|+|+++..++..+ ++++|+.++....
T Consensus       425 G~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~  463 (471)
T KOG0256|consen  425 GSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQV  463 (471)
T ss_pred             CCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhh
Confidence            998754  79999999965555555 9999999987543

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-41  Score=317.80  Aligned_cols=320  Identities=18%  Similarity=0.317  Sum_probs=254.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV  124 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~  124 (421)
                      ..++|+.+...    +++++.+        .....+.|+... ..++++++++++      ++++++|++|+|+++++..
T Consensus        29 ~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~~-~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~~   89 (351)
T PRK01688         29 GDVWLNANEYP----TAVEFQL--------TQQTLNRYPECQ-PKAVIENYAAYA------GVKPEQVLVSRGADEGIEL   89 (351)
T ss_pred             CceEecCCCCC----CCCChhh--------cccccccCCCCC-hHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence            45899888744    3444432        112345786544 479999999997      4789999999999999999


Q ss_pred             HHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          125 ILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       125 ~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      ++++++++| |.|+++.|+|..|...++..|++++.++.+.  ++++|++++++.+ +++++++++|||||||..++.++
T Consensus        90 ~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~  166 (351)
T PRK01688         90 LIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQD  166 (351)
T ss_pred             HHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHH
Confidence            999999997 8999999999999999999999999998753  4789999999887 57899999999999999999999


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      +++|++.|++ +.++|+||+|.+|.... .  ....+...+++++++||||.||++|+|+||++++        +++++.
T Consensus       167 l~~l~~~~~~-~~~vivDEay~~f~~~~-s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~--------~~~i~~  234 (351)
T PRK01688        167 LRTLLELTRG-KAIVVADEAYIEFCPQA-S--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN--------EEVINL  234 (351)
T ss_pred             HHHHHHhCCC-CcEEEEECchhhcCCCC-C--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC--------HHHHHH
Confidence            9999999986 67899999999976321 1  1122234568999999999999999999999985        467777


Q ss_pred             HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631          284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS  363 (421)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (421)
                      +...... .+.+.+++.++.++|......++.+..+.++++++++.+.|++++++..+ .|++++|+|++++        
T Consensus       235 l~~~~~~-~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~ps~~nfi~~~~~--------  304 (351)
T PRK01688        235 LLKVIAP-YPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQV-FDSETNYILARFT--------  304 (351)
T ss_pred             HHhccCC-CCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC--------
Confidence            7766543 35666778787788864334677888888999999999999988776423 6778899998885        


Q ss_pred             ChHHHHHHHHhhcCeeEEeCCCC-CCCCeEEEEecCCHHHHHHHHHHH
Q 014631          364 DDMEFALQLAKEESVIVLPGMAV-GMKNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       364 ~~~~~~~~ll~~~gv~v~~g~~~-~~~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                      +..++...| .++||.++++..+ +..+++||+++ +.++.++++++|
T Consensus       305 ~~~~l~~~L-~~~gi~vr~~~~~~~~~~~iRis~~-~~~e~~~l~~al  350 (351)
T PRK01688        305 ASSAVFKSL-WDQGIILRDQNKQPGLSNCLRITIG-TREECQRVIDAL  350 (351)
T ss_pred             CHHHHHHHH-HHCCeEEEECCCcCCCCCeEEEeCC-CHHHHHHHHHhh
Confidence            356676666 4679999987654 55789999998 458888888876

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.8e-41  Score=314.44  Aligned_cols=304  Identities=18%  Similarity=0.298  Sum_probs=244.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCcee
Q 014631           79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG-ANILLPKPGFPLYEANARHTRLEI  157 (421)
Q Consensus        79 ~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~  157 (421)
                      ...|++.. ..+||+++++++      ++++++|++|+|+++++..++.+++.+| |.|++++|+|..+...++..|.++
T Consensus        53 ~~~Y~~~~-~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~  125 (364)
T PRK04781         53 TRRYPDPQ-PPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPL  125 (364)
T ss_pred             hccCCCCC-HHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEE
Confidence            35787554 689999999998      4688999999999999999999999999 799999999998888889999999


Q ss_pred             EeeeccC-CCCccCCHHHHHhh-hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631          158 RHFDLLP-EKGWEVDLDGLEAL-ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV  235 (421)
Q Consensus       158 ~~~~~~~-~~~~~~d~e~l~~~-~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  235 (421)
                      +.++++. ++++.+|++++++. ..++++++++++||||||.+++.++++++++.|+ ++.++|+||+|.++.+...   
T Consensus       126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~---  201 (364)
T PRK04781        126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVPS---  201 (364)
T ss_pred             EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCcc---
Confidence            9999743 34677899998654 4668899999999999999999999999999986 4789999999999874321   


Q ss_pred             cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHH
Q 014631          236 RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      .+...+..+++++++||||.|+++|+|+||++++        +++++.+.+.... .+.+.+.|.++..+|+.....+..
T Consensus       202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~--------~~l~~~l~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~  272 (364)
T PRK04781        202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN--------AELIAVLRRCQAP-YPVPTPCAALAEQALSAPALAVTA  272 (364)
T ss_pred             hHHHHhhCCCEEEEecChhhcccccceeeeeeCC--------HHHHHHHHhccCC-CCCCHHHHHHHHHHHhcccHHHHH
Confidence            1222344568999999999999999999999986        4678888777654 366778888888888764345566


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-CCCCeEEE
Q 014631          316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-GMKNWLRI  394 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-~~~~~iRi  394 (421)
                      +..+.++++++.+.+.|++++++..+ .|.+|+|+|++++        +..++... ++++||.|.+|..| +.++++||
T Consensus       273 ~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~~g~f~~~~~~--------~~~~~~~~-l~~~gI~v~~~~~~~~~~~~~Ri  342 (364)
T PRK04781        273 RRVAEVRAERERLHAALAQLPGVRRV-YPSQGNFLLVRFD--------DAEAAFQA-LLAAGVVVRDQRAAPRLSDALRI  342 (364)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC--------CHHHHHHH-HHHCCeEEeeCCCCCCCCCeEEE
Confidence            66678899999999999988776423 6788999999886        24555554 57889999999765 34679999


Q ss_pred             EecCCHHHHHHHHHHHHHH
Q 014631          395 TFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       395 ~~~~~~e~l~~~~~~l~~~  413 (421)
                      +++. .++.++++++|+++
T Consensus       343 s~~~-~~~~~~l~~al~~~  360 (364)
T PRK04781        343 TLGT-PEQNDRVLAALQRT  360 (364)
T ss_pred             eCCC-HHHHHHHHHHHHHH
Confidence            9985 45667777776654

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=2.3e-40  Score=311.42  Aligned_cols=329  Identities=21%  Similarity=0.326  Sum_probs=262.6

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      ..+|+|+.|.+.    +++++.+.+++.+.+..  ...|+ ..|..++|+++++++      ++++++|++|+|+++++.
T Consensus        22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~-~~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~   88 (352)
T PRK03321         22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYP-DMGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ   88 (352)
T ss_pred             ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCC-CCcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence            468999999876    46678899999887754  35675 578999999999998      367889999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      .++..++++||+|+++.|+|..+...++..|.+++.++.+++  +++|++++++.++++++++++++|+||||.+++.++
T Consensus        89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~  166 (352)
T PRK03321         89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE  166 (352)
T ss_pred             HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence            999999999999999999999888888999999999887543  568999999998888999999999999999999998


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      +.++++.+ ++|+++|+||+|.++.+++....++...+..+++++++||||.|+++|+|+||++++        +++++.
T Consensus       167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~~  237 (352)
T PRK03321        167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH--------PEVIAA  237 (352)
T ss_pred             HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC--------HHHHHH
Confidence            88888876 479999999999998876543333444445568999999999999999999999985        357777


Q ss_pred             HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631          284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS  363 (421)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (421)
                      +..... ..+.+.+.|.++..++.. ... +.+..+.+.+.++.+.+.|++. ++. + .+.+|+|+|+.++.       
T Consensus       238 ~~~~~~-~~~~s~~~q~~a~~~l~~-~~~-~~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~~~g~~i~i~l~~-------  304 (352)
T PRK03321        238 LRKVAV-PFSVNSLAQAAAIASLAA-EDE-LLERVDAVVAERDRVRAALRAA-GWT-V-PPSQANFVWLPLGE-------  304 (352)
T ss_pred             HHHhcC-CCCCCHHHHHHHHHHhcC-HHH-HHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCCCEEEEeCCC-------
Confidence            766543 347788999888888863 233 3444455556677888999886 776 4 34568899998852       


Q ss_pred             ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          364 DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       364 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      ++.++...+ +++||.+.+   |+ ..++||+++ +.++.++++++|.+++.
T Consensus       305 ~~~~~~~~l-~~~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~  350 (352)
T PRK03321        305 RTADFAAAA-AEAGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA  350 (352)
T ss_pred             CHHHHHHHH-HHCCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence            356677665 778999987   33 356999985 56788888888887653

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=7.8e-40  Score=309.16  Aligned_cols=325  Identities=20%  Similarity=0.339  Sum_probs=258.4

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-cCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL-TAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~g~~~a  121 (421)
                      +.++|+|+.|.+.    +++++.+++++.+.+..  ...|++.. .+++|+++++++      ++++++|++ ++|++++
T Consensus        33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~   99 (361)
T PRK00950         33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV   99 (361)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence            4589999999855    46778888988887764  35677654 499999999998      467889999 7899999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +..++++++++||+|++++|+|..+...++..|++++.++.  ++++.+|++++++.+.++++++++++|+||||.+++.
T Consensus       100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~  177 (361)
T PRK00950        100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE  177 (361)
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence            99999999899999999999999998888999999988874  3456799999999888788999999999999999997


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++.++   |+++|+++|+||+|.++.  +.....+  .+..+++++++||||.|+++|+|+||++++        ++++
T Consensus       178 ~~l~~l---~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~--------~~~~  242 (361)
T PRK00950        178 EDIRKI---LESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVP--------EWLI  242 (361)
T ss_pred             HHHHHH---HHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCC--------HHHH
Confidence            766655   567899999999998865  2222221  223357899999999999999999999985        3577


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+.+.+.+.++..+++.  .+++++..++++++++.+.+.|.    +. + .|.+++|+|+.++.     
T Consensus       243 ~~~~~~~~~-~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~~~~~~i~~~~~~-----  308 (361)
T PRK00950        243 DYYMRAKTP-FSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP----FK-V-YPSEANFVLVDVTP-----  308 (361)
T ss_pred             HHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC----ee-E-CCCcceEEEEECCC-----
Confidence            777665543 34677888888888864  46677788888888888887775    34 3 46678899998842     


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                       .+..+++..+. ++||.+.||..|..  ++++|++++ +.+++++++++|++++
T Consensus       309 -~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il  360 (361)
T PRK00950        309 -MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV  360 (361)
T ss_pred             -CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence             14677777764 57999999988754  468999998 5578999999998875

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.5e-40  Score=309.09  Aligned_cols=321  Identities=16%  Similarity=0.252  Sum_probs=249.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +...++|+.+.+.    +++++.+      ...  ....|++. +..+||+++|+++      ++++++|++|+|+++++
T Consensus        30 ~~~~~~l~~ne~~----~~~~~~~------~~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i   90 (354)
T PRK04635         30 GRGDIWINANESP----FNNEYKL------DLA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAI   90 (354)
T ss_pred             CCCcEEeeCCCCC----CCCChhh------hhH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence            3466899998855    2344332      111  24578765 4799999999997      57899999999999999


Q ss_pred             HHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      .+++++++++| |+|++++|+|..|...++..|++++.+|++.  ++.+|++.+++ + ++++++++++||||||.+++.
T Consensus        91 ~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~  166 (354)
T PRK04635         91 ELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDR  166 (354)
T ss_pred             HHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCH
Confidence            99999999999 8999999999999999999999999998753  46789988874 3 578999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|++.|+  +++||+||+|.++... .....+  ....+++++++||||+|+++|+|+||++++        ++++
T Consensus       167 ~~l~~l~~~~~--~~~vivDeay~~~~~~-~s~~~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~--------~~~~  233 (354)
T PRK04635        167 ADIEQLIEMTP--DAIVVVDEAYIEFCPE-YSVADL--LASYPNLVVLRTLSKAFALAGARCGFTLAN--------EELI  233 (354)
T ss_pred             HHHHHHHHhCC--CcEEEEeCchHhhccC-cchHHH--HhhCCCEEEEechHHHhhhhHHHHhhhhCC--------HHHH
Confidence            99999999876  4999999999987632 111111  233467899999999999999999999985        4577


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+.+.+.+.++.+++......++.+..+.++++++.+.+.|++++++. +..+ .|.|+|++++      
T Consensus       234 ~~l~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~-~g~f~~~~~~------  304 (354)
T PRK04635        234 EILMRVIAP-YPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-VLEG-NGNYVLAKFD------  304 (354)
T ss_pred             HHHHhhcCC-CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-ECCC-CCcEEEEECC------
Confidence            777654432 356667788887888643345567777889999999999999886676 4344 5678998885      


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                        +..++.. ++.++||.++++..++.++++|+|++ +.+++++++++|++
T Consensus       305 --~~~~~~~-~l~~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~  351 (354)
T PRK04635        305 --DVDAVFK-ALWDAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRN  351 (354)
T ss_pred             --CHHHHHH-HHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHH
Confidence              2445544 56788999987655445679999987 46888888888764

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.4e-39  Score=300.03  Aligned_cols=318  Identities=18%  Similarity=0.271  Sum_probs=247.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .+.++++|+.|++.    +++|+.+.+++.+.+.....+.|++. +.++||+++++|+++.+   +++++|++|+|++++
T Consensus        17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~   88 (335)
T PRK14808         17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI   88 (335)
T ss_pred             CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence            36789999999866    68889999999888765444457554 78999999999997642   679999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +.++++.+    |.|++++|+|..|...++..|++++.++.+.  ++.++...    + ..++++++++||||||.+++.
T Consensus        89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~  157 (335)
T PRK14808         89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----V-GEGDVVFIPNPNNPTGHVFER  157 (335)
T ss_pred             HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence            99999887    7899999999999999999999999998753  23344222    2 246889999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|+    +++++||+||+|.++.  +....++  ....+++++++||||.|+++|+|+||++++        ++++
T Consensus       158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~~--~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~--------~~~~  221 (335)
T PRK14808        158 EEIERIL----KTGAFVALDEAYYEFH--GESYVDL--LKKYENLAVIRTFSKAFSLAAQRIGYVVSS--------EKFI  221 (335)
T ss_pred             HHHHHHH----hcCCEEEEECchhhhc--CCchHHH--HHhCCCEEEEEechhhccCcccceEEEEeC--------HHHH
Confidence            9998886    4799999999999974  3222221  223458999999999999999999999986        3577


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+.+.++|.++..+++.  ..+..+..+.++++++.+.+.|+++ |+. +..| .|.|+|+.++..    
T Consensus       222 ~~l~~~~~~-~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~g~f~~~~l~~~----  291 (335)
T PRK14808        222 DAYNRVRLP-FNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDS-RGNFVFIFMEKE----  291 (335)
T ss_pred             HHHHHhcCC-CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCC-CCeEEEEeCCCc----
Confidence            777666533 46778889888888864  3466777778888899999999987 776 4345 566889988631    


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                        +..++.. .+.++||.|+.   |  .+++||+++.. ++.+++++.|+++
T Consensus       292 --~~~~~~~-~l~~~Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~~~  334 (335)
T PRK14808        292 --EKERLLE-HLRAKNIAVRS---F--REGVRITIGKR-EENDMILKELEVF  334 (335)
T ss_pred             --cHHHHHH-HHHHCCeEEEE---C--CCCeEEecCCH-HHHHHHHHHHHhh
Confidence              3445554 45778999985   3  36899998864 6667888777653

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.5e-39  Score=299.26  Aligned_cols=319  Identities=19%  Similarity=0.325  Sum_probs=247.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +..+++|+.|.+.    +++++.+.+++.+.+.......|+ ..|.+++|+++++++      ++++++|++|+|+++++
T Consensus        17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l   85 (337)
T PRK03967         17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY------GLDAENIAVGNGSDELI   85 (337)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence            4578999999865    577788999999888654456786 468999999999999      37889999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++..+  +||+|+++.|+|..+...++..|.+++.++.+  +++++|++.+++.. ++++++++++|+||||.+++.+
T Consensus        86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~  160 (337)
T PRK03967         86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE  160 (337)
T ss_pred             HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence            9988776  79999999999999988889999999999875  34679999998865 5678888999999999999987


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++.+++    ++|+++|+||+|.++.  +....+  ..+..+++++++||||.|+++|+|+||++++        +++++
T Consensus       161 ~l~~i~----~~~~~ii~De~y~~~~--~~~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~--------~~~i~  224 (337)
T PRK03967        161 EILKVL----ETGKPVVLDEAYAEFS--GKSLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIAN--------EEIID  224 (337)
T ss_pred             HHHHHH----hcCCEEEEECchhhhc--ccchHH--HHhhCCCEEEEecchHhhcchhhhheeeecC--------HHHHH
Confidence            776654    3699999999999875  222222  1233457999999999999999999999985        35777


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+...... .+.+.++|.++..+++.  .++..+..+...++++.+.+.|.+.     . .|++++|+|+.++       
T Consensus       225 ~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~~~~~~~~~~-------  288 (337)
T PRK03967        225 ALYRIKPP-FSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY-----A-YPSDANFLLLKLD-------  288 (337)
T ss_pred             HHHhhcCC-CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC-----c-CCCCCcEEEEhHH-------
Confidence            77766543 36778999999888864  3456666666677788888888753     2 4678899997652       


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                           +...+ .++||.++++.. ...+++|++++. .++.+++++.|+++.+.+
T Consensus       289 -----~~~~l-~~~gi~v~~~~~-~~~~~~Ri~~~~-~~~~~~l~~~l~~~~~~~  335 (337)
T PRK03967        289 -----AYDYL-LENGIVVRKLSG-RLEGHIRVTVGK-REENDEFIKALKEIKEGY  335 (337)
T ss_pred             -----HHHHH-HHCCEEEEeCCC-CCCCeEEEecCC-HHHHHHHHHHHHHHHHhc
Confidence                 34444 457999988653 235799999984 344556666666655443

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3.9e-39  Score=299.82  Aligned_cols=295  Identities=18%  Similarity=0.206  Sum_probs=228.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeE
Q 014631           79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIR  158 (421)
Q Consensus        79 ~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  158 (421)
                      ...|+.. -..+||+++++++      +.++++|++|+|+++++..++.. +++| .|++++|+|..|...++..|++++
T Consensus        34 ~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~~~~~-~~~~-~vv~~~P~y~~y~~~~~~~G~~v~  104 (332)
T PRK06425         34 ISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYRLLSY-INVG-NIIIVEPNFNEYKGYAFTHGIRIS  104 (332)
T ss_pred             cccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHHHHHH-hCCC-cEEEeCCChHHHHHHHHHcCCeEE
Confidence            3468644 4689999999998      46899999999999999999974 5776 577779999999999999999999


Q ss_pred             eeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631          159 HFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG  238 (421)
Q Consensus       159 ~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  238 (421)
                      .+|++.   ++.|.+.+++   .+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .....
T Consensus       105 ~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~  177 (332)
T PRK06425        105 ALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA-EEDVL  177 (332)
T ss_pred             EEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc-hhHHH
Confidence            999753   3456555543   3778999999999999999999999999999999999999999999876542 11122


Q ss_pred             ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc-chhHHHHH
Q 014631          239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT-KEDFFSKI  317 (421)
Q Consensus       239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~  317 (421)
                      ..+..+++++++||||.|++||+|+||++++        +++++.+....... +.+..++.    ++... .+.+.++.
T Consensus       178 ~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~--------~~li~~l~~~~~~~-~~~~~~~~----~l~~~~~~~~~~~~  244 (332)
T PRK06425        178 LNRSYGNVIIGRSLTKILGIPSLRIGYIATD--------DYNMKISRKITEPW-SVCDPAID----FIRSIDLDYVAKHS  244 (332)
T ss_pred             HhccCCCEEEEeecHHhcCCchhhheeeecC--------HHHHHHHHHcCCCC-ccCHHHHH----HHHHhhhHHHHHHH
Confidence            2233468999999999999999999999986        35777776654322 23333322    22221 23456777


Q ss_pred             HHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEE
Q 014631          318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRIT  395 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~  395 (421)
                      ++.++++++.+.+.|+++ ++. +..+.+|+|+|++++        ++.++...++ ++||.+.||..|+.  ++++||+
T Consensus       245 ~~~~~~~r~~l~~~L~~~-g~~-~~~~~~g~f~~~~~~--------~~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis  313 (332)
T PRK06425        245 LDIMENERSYLINNLEAM-GFR-AAGDPSANFITFMIP--------DAHDFYSYLL-KNGILVRLLDDYECLGEQYIRIA  313 (332)
T ss_pred             HHHHHHHHHHHHHHHHHC-CCE-ECCCCCceEEEEEcC--------CHHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEE
Confidence            889999999999999987 776 334556889999885        3567777765 57999999998853  4699999


Q ss_pred             ecCCHHHHHHHHHHHHHHH
Q 014631          396 FAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       396 ~~~~~e~l~~~~~~l~~~~  414 (421)
                      ++. .++.++++++|++++
T Consensus       314 ~~~-~~~~~~l~~al~~~~  331 (332)
T PRK06425        314 IRR-RSFNIKLVNALRNFL  331 (332)
T ss_pred             eCC-HHHHHHHHHHHHHHh
Confidence            985 467788888888764

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=3e-38  Score=293.47  Aligned_cols=309  Identities=17%  Similarity=0.179  Sum_probs=234.7

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      .++|+|+.+...   ..++++.+.+   ..+     ..|+..  ..+||++++++++        +++|++|+|+++++.
T Consensus        20 ~~~i~l~~ne~p---~~~~~~~~~~---~~~-----~~yp~~--~~~Lr~~ia~~~~--------~~~I~it~Gs~~al~   78 (330)
T PRK05664         20 ADWLDLSTGIAP---WPWPVPAIPA---DAW-----ARLPET--DDGLEAAARAYYG--------APQLLPVAGSQAAIQ   78 (330)
T ss_pred             HHheeecCCcCC---CCCCCcccCH---HHH-----HhCCCC--hHHHHHHHHHHhC--------CCCEEECcCHHHHHH
Confidence            357999999522   1122122221   111     246543  3899999999983        479999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      +++  ++.+||+|++++|+|+.+...++..|++++.++.+          ++++.++ +++++++++||||||.+++.++
T Consensus        79 ~~~--~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~  145 (330)
T PRK05664         79 ALP--RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD-SLDVLVVVNPNNPTGRRFDPAR  145 (330)
T ss_pred             HHH--HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc-CCCEEEEeCCcCCCCCccCHHH
Confidence            886  34799999999999999999999999999888642          3444443 6778899999999999999999


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      +++|+++|+++|++||+||+|.++.  .  ..++..+...+++++++||||.|+++|+|+||++++        +++++.
T Consensus       146 l~~l~~~~~~~~~~iI~DE~y~~~~--~--~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~--------~~l~~~  213 (330)
T PRK05664        146 LLAWHARLAARGGWLVVDEAFMDNT--P--QHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE--------PALLRA  213 (330)
T ss_pred             HHHHHHHHHhcCCEEEEECCcccCC--C--cccccccccCCCEEEEeeccccccCCCcceEEEEeC--------HHHHHH
Confidence            9999999999999999999998754  1  123344445568999999999999999999999986        357777


Q ss_pred             HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631          284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS  363 (421)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (421)
                      +...... .+.+.+.|.++..+|..  ..+.++.++.++++++.+.+.|+++ ++. + .+..++|+|+.++        
T Consensus       214 ~~~~~~~-~~~~~~~~~~~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~-~~~~~~f~~~~~~--------  279 (330)
T PRK05664        214 LAELLGP-WTVSGPTRWLAQAALAD--TPWQRRQRERLLAASQRLAALLRRH-GLT-P-AGGCALFQWVRTE--------  279 (330)
T ss_pred             HHHhcCC-CCCCHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cCCcceEEEEecC--------
Confidence            7766442 35677888888888864  3556777889999999999999987 654 2 2222378887664        


Q ss_pred             ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          364 DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       364 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                      ++.++... +.++||.|.+   |...+++||+++.+.++.+++.+.|+++.++
T Consensus       280 ~~~~~~~~-l~~~gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~~  328 (330)
T PRK05664        280 DAAALHEF-LARRGILTRL---FEQPASLRFGLPADEADWARLDQALLAYRKE  328 (330)
T ss_pred             CHHHHHHH-HHHCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence            35566655 5778999975   4456899999997677788888887776543

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=8.8e-39  Score=297.20  Aligned_cols=312  Identities=18%  Similarity=0.250  Sum_probs=248.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      +++++++|+.|.+..    +++  ..+...     .....|+++.+ +++|+.+++++      ++++++|++|+|++++
T Consensus        15 ~~~~~~~~~~~~~~~----~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~   76 (330)
T TIGR01140        15 PPEDWLDFSTGINPL----GPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEA   76 (330)
T ss_pred             ChhheeEccccCCCC----CCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHH
Confidence            467889999998552    222  222111     12357877665 99999999998      3678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +..+...+ .+| .|++++|+|..+...++..|.+++.++         |++++++.+. +++++++++|+||||.+++.
T Consensus        77 i~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~  144 (330)
T TIGR01140        77 IYLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPP  144 (330)
T ss_pred             HHHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCH
Confidence            99987664 677 799999999999999999999988875         7788888874 57789999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc-cCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV-FGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      +++++|+++|+++|+++|+||+|.++.+..    ++.. .+..+++++++||||.|+++|+|+||++++        +++
T Consensus       145 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~--------~~~  212 (330)
T TIGR01140       145 ETLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH--------PAL  212 (330)
T ss_pred             HHHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCC--------HHH
Confidence            999999999999999999999999876431    2222 233467899999999999999999999985        356


Q ss_pred             HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      ++.+...... .+.+.++|.++..+++.  ..+.++.+++++++++.+.+.|++++.+. + .|.+++|.|+.++     
T Consensus       213 ~~~l~~~~~~-~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~f~~~~~~-----  282 (330)
T TIGR01140       213 LARLREALGP-WTVNGPARAAGRAALAD--TAWQAATRARLAAERARLAALLARLGGLE-V-VGGTALFLLVRTP-----  282 (330)
T ss_pred             HHHHHhcCCC-CCchHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCeEEEEEcC-----
Confidence            7777666543 35678889999888874  45667788999999999999999985565 4 4667899998876     


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHH
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                         +..++++.++ ++||.+.||..|..  .+++|++++...++ ++++.+|
T Consensus       283 ---~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l  329 (330)
T TIGR01140       283 ---DAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL  329 (330)
T ss_pred             ---CHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence               3567777765 57999999999852  47999999976666 7777665

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=8.2e-38  Score=291.01  Aligned_cols=312  Identities=14%  Similarity=0.164  Sum_probs=239.6

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAI  122 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al  122 (421)
                      ..+++|+.+...   ..++++.+..   ..     +..|+.. . .+|+++++++++      +. +++|++|+|+++++
T Consensus        24 ~~~i~ls~Nenp---~~~~~~~~~~---~~-----~~~Yp~~-~-~~L~~~ia~~~~------~~~~~~I~i~~Gs~e~i   84 (339)
T PRK06959         24 DAWLDLSTGINP---HGYPVPPVPA---DA-----WRRLPED-D-DGLAACAARYYG------APDAAHVLPVAGSQAAI   84 (339)
T ss_pred             hhhceeccCCCC---CCCCCCCCCH---HH-----HHhCCCc-h-HHHHHHHHHHhC------CCCcccEEECcCHHHHH
Confidence            467999988733   1122122211   11     2357654 3 899999999984      43 58999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .++.. ++++|| |++++|+|..|...++..|++++.++.+.        +.+.    +..+.+++++||||||.+++.+
T Consensus        85 ~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~~----~~~~~v~l~nPnNPTG~~~s~~  150 (339)
T PRK06959         85 RALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTLP----AALTHLIVVNPNNPTAERLPAA  150 (339)
T ss_pred             HHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhcc----ccCCEEEEeCCCCCCCCCCCHH
Confidence            97765 467876 88999999999999999999988876532        2222    2346889999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|++.|++++.++|+||+|.++...    .++..+...+++++++||||.|+++|+|+||++++        +++++
T Consensus       151 ~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~--------~~li~  218 (339)
T PRK06959        151 RLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA--------PALLA  218 (339)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecC--------HHHHH
Confidence            9999999999999999999999997532    22333323467999999999999999999999986        46788


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+...... .+.+.++|.++.++|+.  ..+.++.++.++++++.+.+.|+++ |+. + . .+++|+|++++       
T Consensus       219 ~l~~~~~~-~~vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~-~~~~f~~~~~~-------  284 (339)
T PRK06959        219 ALRDALGA-WTVSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAH-GFA-V-H-ATPLFSWTDDP-------  284 (339)
T ss_pred             HHHHhcCC-CCCcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-c-CcceEEEEeCC-------
Confidence            88777543 35678899999999964  4677888899999999999999987 776 3 2 35789998775       


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       +..++...+ .++||.|+.   |+..+++||+++.+.++.+++++.|+++++.+.+
T Consensus       285 -~~~~l~~~l-~~~GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~~  336 (339)
T PRK06959        285 -RAAALHAAL-ARRGIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLAA  336 (339)
T ss_pred             -CHHHHHHHH-HhCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHhh
Confidence             245666655 667999975   3445799999977778999999999888766543

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=1.1e-37  Score=287.34  Aligned_cols=302  Identities=15%  Similarity=0.249  Sum_probs=221.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..++|+|+.|...    ++ |+.+++++.+.+..  ...|+.   ...+|++++++++         ++|++|+|+++++
T Consensus         7 ~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al   67 (311)
T PRK08354          7 EEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEAL   67 (311)
T ss_pred             ccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHH
Confidence            4578999998533    23 57888999887654  346753   4789999999872         4799999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++..+ .+||+|++++|+|+.+...++..|.+++.++        +|++.+++.++ +++.+++++||||||.+++.+
T Consensus        68 ~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~  137 (311)
T PRK08354         68 YLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFK  137 (311)
T ss_pred             HHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHH
Confidence            9888544 4899999999999999999999999886543        57888988776 467889999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|+++|+++|+++|+||+|.++.+++..      . ..+++++++||||.|+++|+|+||+++           +.+
T Consensus       138 ~l~~l~~~a~~~~~~li~De~y~~f~~~~~~------~-~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~~  199 (311)
T PRK08354        138 ELKPLLDAVEDRNALLILDEAFIDFVKKPES------P-EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FEE  199 (311)
T ss_pred             HHHHHHHHhhhcCcEEEEeCcchhccccccc------c-CCCcEEEEeccHhhcCCccceeeeeee-----------hHH
Confidence            9999999999999999999999998876421      1 145799999999999999999999997           234


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .++..... ...+...+.++..+++. ...++.+.++.+++.++.+.+.+        ...|.++ |+++.++       
T Consensus       200 ~l~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~~~-~~~~~~~-------  261 (311)
T PRK08354        200 AFRSVRMP-WSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERFEKAL--------YVKSDAN-FFIKDVG-------  261 (311)
T ss_pred             HHHHcCCC-ccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhc--------CCCCCCc-EEEEECC-------
Confidence            44444332 23445566666666652 22344444444444444433322        1145554 5555553       


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                       ++.++...+ .++||.+.||..|+.++++||+++..+ +.+++++.|++
T Consensus       262 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~-~~~~l~~al~~  308 (311)
T PRK08354        262 -DAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRDRE-ENEKLIRALRE  308 (311)
T ss_pred             -CHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCCHH-HHHHHHHHHHH
Confidence             355676655 678999999999987799999998433 23444444443

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=6.1e-38  Score=278.83  Aligned_cols=327  Identities=22%  Similarity=0.344  Sum_probs=261.6

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCC-CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeE
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCK-LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIR  158 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  158 (421)
                      .+|+++.|.++|...+.++....+..+ ..+-+|++|+|.|.++..+++.++++||.|+++.++|.+.....+..|++++
T Consensus        94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i  173 (472)
T KOG0634|consen   94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII  173 (472)
T ss_pred             hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence            489999999999999999765333222 2334899999999999999999999999999999999999999999998888


Q ss_pred             eeeccCCCCccCCHHHHHhhhcc---------CceEEEEeCC--CCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631          159 HFDLLPEKGWEVDLDGLEALADE---------NTVAMVIVNP--GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL  227 (421)
Q Consensus       159 ~~~~~~~~~~~~d~e~l~~~~~~---------~~~~i~~~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~  227 (421)
                      +|+.+   ..++++|.+++.+..         ++ -|+.+-|  +||||..++.+++++|.++|++||++||+||.|..+
T Consensus       174 pv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p-~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L  249 (472)
T KOG0634|consen  174 PVKMD---QDGIDPESLEEILSNWKPGSYKKPKP-HVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL  249 (472)
T ss_pred             ecccc---CCCCCHHHHHHHHhcCCcccccCCCC-eEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence            77763   336899999987742         23 3556666  899999999999999999999999999999999988


Q ss_pred             ccCC---C-----C-----------cccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-
Q 014631          228 TFGS---T-----P-----------YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-  287 (421)
Q Consensus       228 ~~~~---~-----~-----------~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-  287 (421)
                      .++.   .     +           ..++..++.+++||.+.||||. .+||+|+||+.++.        .+++++-.. 
T Consensus       250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~--------~~l~ril~~a  320 (472)
T KOG0634|consen  250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS--------LFLKRILDLA  320 (472)
T ss_pred             eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH--------HHHHHHhhhc
Confidence            8762   1     1           1223345678899999999999 58999999999862        345554443 


Q ss_pred             cccccCCchHHHHHHHHHhhccch----hHHHHHHHHHHHHHHHHHHHhhc-CCCc-cccCCCCceeEEEEecCcccc--
Q 014631          288 LNISSGPATFVQGAVPQIFKNTKE----DFFSKIVDILRDTADICYDRIKE-IPCI-TCPRKPEGSMFVMVKLNLSLL--  359 (421)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~l~~-~~g~-~~~~~~~~~~~~~~~~~~~~~--  359 (421)
                      ...+.+++.+.|..+.+.|+.-.+    .|+.+.+..|..+++.+..+|.+ +|.- ..+..|.+|+|+|++++....  
T Consensus       321 e~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~  400 (472)
T KOG0634|consen  321 EVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDT  400 (472)
T ss_pred             ceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccccccc
Confidence            344567899999999999876443    77888889999999999999997 4543 336789999999999972111  


Q ss_pred             -cCCCChHHHHHHHHhhcCeeEEeCCCCCC------CC-eEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631          360 -EGISDDMEFALQLAKEESVIVLPGMAVGM------KN-WLRITFA-IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       360 -~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~-~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       +.....++.....+.++||.+++|+.|..      .. ++|++++ .+.|+++++++++..+++++-+
T Consensus       401 ~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~  469 (472)
T KOG0634|consen  401 KKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFI  469 (472)
T ss_pred             ccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhh
Confidence             01112467777788999999999999854      23 8999999 7889999999999999998754

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=1.7e-36  Score=285.62  Aligned_cols=346  Identities=32%  Similarity=0.558  Sum_probs=276.7

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHH
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVIL  126 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~  126 (421)
                      +||+.|.+.    +..++.+..++.+.-.......|++..+..++++.++++++..++....++++++++|+++++..++
T Consensus         1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~   76 (350)
T cd00609           1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL   76 (350)
T ss_pred             CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence            578888865    3455666666554222233457888899999999999999987776667889999999999999999


Q ss_pred             HHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHH
Q 014631          127 TVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQK  206 (421)
Q Consensus       127 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~  206 (421)
                      .++.++||+|+++.++|.++...++..|.+++.++.+.+.....+.+.++....++++++++++|+||||..+|.+++++
T Consensus        77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~  156 (350)
T cd00609          77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE  156 (350)
T ss_pred             HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence            99999999999999999999999999999999999865444332236666667778999999999999999999999999


Q ss_pred             HHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh
Q 014631          207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG  286 (421)
Q Consensus       207 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  286 (421)
                      |.++|+++|+++|+|++|+.+.+.+.....+...+..+.+++++|+||.++.+|.|+|++++++       .++.+.+..
T Consensus       157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~-------~~~~~~~~~  229 (350)
T cd00609         157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK  229 (350)
T ss_pred             HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH-------HHHHHHHHH
Confidence            9999999999999999999887665543222233444567889999999988999999999863       246666666


Q ss_pred             hccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCCh
Q 014631          287 YLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDD  365 (421)
Q Consensus       287 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (421)
                      .... +.+++...+.++..+++... .+.++.+++++++++++.+.|++++... ...+.+++++|+.++..      ..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~g~~~~~~~~~~------~~  301 (350)
T cd00609         230 LLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEG------DD  301 (350)
T ss_pred             HHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCccEEEEEecCCC------Ch
Confidence            5433 45788888888888887533 6788888999999999999999874443 23567789999988642      24


Q ss_pred             HHHHHHHHhhcCeeEEeCCCCC--CCCeEEEEecCCHHHHHHHHHHHH
Q 014631          366 MEFALQLAKEESVIVLPGMAVG--MKNWLRITFAIEPSALEEGLGRIK  411 (421)
Q Consensus       366 ~~~~~~ll~~~gv~v~~g~~~~--~~~~iRi~~~~~~e~l~~~~~~l~  411 (421)
                      .+.+.+++.++||.+.++..|.  .+.++|++++..++++++++++|+
T Consensus       302 ~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~  349 (350)
T cd00609         302 EEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA  349 (350)
T ss_pred             HHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence            5667778888999999988776  578999999955999999999886

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.7e-35  Score=248.66  Aligned_cols=364  Identities=24%  Similarity=0.371  Sum_probs=270.2

Q ss_pred             hhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHh----cC----CCCCCCCCCCCHHHHHHH
Q 014631           24 TLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVR----SA----EFDCYSPSVGILPARRAI   95 (421)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~----~~----~~~~y~~~~g~~~l~~~i   95 (421)
                      -+.|+.+++.+.+-+.   .+..|.|+.|+|...      |++.+..++...    .+    ..++|..++|...|.+++
T Consensus        13 ~sGi~~lMdDl~d~Lr---t~g~imLggGNPa~i------Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~al   83 (417)
T COG3977          13 HSGITQLMDDLNDGLR---TPGAIMLGGGNPARI------PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDAL   83 (417)
T ss_pred             hhhHHHHHHHHHhhcc---CCCceeeCCCCcccC------hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHH
Confidence            4668888888877663   455999999998743      455555554433    22    356899999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC---CC--CeEEEc-CCCCcchHHHHhhcCceeEe---eeccCCC
Q 014631           96 ADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR---PG--ANILLP-KPGFPLYEANARHTRLEIRH---FDLLPEK  166 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~---~g--d~Vl~~-~p~y~~~~~~~~~~g~~~~~---~~~~~~~  166 (421)
                      ++++++++|++..+++|.+|+|++.+.+.++..+..   .|  .+|+.+ .|.|.+|..+...-..=+.+   +.+.+..
T Consensus        84 a~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g  163 (417)
T COG3977          84 AKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAG  163 (417)
T ss_pred             HHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCccccccc
Confidence            999999999999999999999999999998877742   34  467776 79999886544321111111   1122222


Q ss_pred             C--ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc----c
Q 014631          167 G--WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV----F  240 (421)
Q Consensus       167 ~--~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~----~  240 (421)
                      .  +.+|.+++.  +.+.+.+|+++-|.||||.+++.+++.+|..+|++||+.+|+|.+|+.      +++.+.-    .
T Consensus       164 ~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~------PFP~iifsd~~~  235 (417)
T COG3977         164 QFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV------PFPGIIFSDATP  235 (417)
T ss_pred             ceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC------CCCceecccccc
Confidence            2  456777764  346788899999999999999999999999999999999999999975      2222211    1


Q ss_pred             CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHH-HH-H
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFF-SK-I  317 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-~~-~  317 (421)
                      -..+|++.|.|+||. |+||.|||.+++.        +++++.+..... .+..+..+.++.+..+++......+ ++ +
T Consensus       236 ~w~~NiilC~SLSK~-GLPG~R~GIiIan--------e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVI  306 (417)
T COG3977         236 LWNENIILCMSLSKL-GLPGSRCGIIIAN--------EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVI  306 (417)
T ss_pred             cCCCCEEEEeehhhc-CCCCcceeEEEcc--------HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhh
Confidence            235689999999999 9999999999985        467777766543 3456777888888888887542222 23 2


Q ss_pred             HHHHHHHHHHHHHHhhc-CCC--ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC------
Q 014631          318 VDILRDTADICYDRIKE-IPC--ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM------  388 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~-~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------  388 (421)
                      +.-|+++.....+.|++ +|.  +. ++.|++..|+|+.|.+..+    ++..+.++ +++.||.++||+.|-.      
T Consensus       307 rPFY~~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf~dLPI----tt~~LYq~-LKa~Gvl~VPG~~FFpGl~~ew  380 (417)
T COG3977         307 RPFYRNRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWFKDLPI----TTEELYQR-LKARGVLMVPGHYFFPGLDKEW  380 (417)
T ss_pred             hHHHHHHHHHHHHHHHHhcCcccee-eecCCcceeehhhhccCCC----CHHHHHHH-HHhCeEEEecccccCCCCCCCC
Confidence            34566666666666653 333  33 5799999999999877543    46677666 4889999999998743      


Q ss_pred             ---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          389 ---KNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       389 ---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                         +.++|+++..+++++++++++|.+.+++..+
T Consensus       381 pH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~yq  414 (417)
T COG3977         381 PHTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQ  414 (417)
T ss_pred             CCccceEEEecCCCHHHHHHHHHHHHHHHHHHHh
Confidence               4689999999999999999999999987654

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=100.00  E-value=2e-34  Score=275.98  Aligned_cols=366  Identities=17%  Similarity=0.141  Sum_probs=261.3

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcH---HHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTP---VAADAVVDAVRSAEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i   95 (421)
                      +++++++.+.....+.++ + +..|.++|+|.+|+|..  ++++|+   .+.+++.+++..+. ..|.+..|+++||+++
T Consensus        13 ~~~v~~~~~~~~~~~~~~-l-~~~g~~~~~L~~g~p~~--D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreai   87 (460)
T PRK13238         13 IKMVEPIRLTTREERERA-L-AEAGYNPFLLKSEDVFI--DLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAV   87 (460)
T ss_pred             eceeccccccCHHHHHHH-H-HHcCCCEEeCCCCCCCC--CCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHH
Confidence            344444444444443332 1 23489999999999842  234444   67888888876543 4799999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC------CCcc
Q 014631           96 ADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE------KGWE  169 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~------~~~~  169 (421)
                      +++++        .+.+++|+|+++|+.+++.++++||| |++++|.|..+...+...|++++.++++..      ++|.
T Consensus        88 a~~~~--------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~  158 (460)
T PRK13238         88 KDIFG--------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFK  158 (460)
T ss_pred             HHHhC--------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEecccccccccccccc
Confidence            99984        35799999999999999999999999 999999999999989999999999988542      3444


Q ss_pred             --CCHHHHHhhhcc----CceEEEEeCCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccc--cccCC-----CCcc
Q 014631          170 --VDLDGLEALADE----NTVAMVIVNPGNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDH--LTFGS-----TPYV  235 (421)
Q Consensus       170 --~d~e~l~~~~~~----~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~~~~~-----~~~~  235 (421)
                        +|+++|++.+.+    ++++|++++|+|||| .+++.+++++|.++|++||+++|+|+++..  ..|..     ....
T Consensus       159 g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~  238 (460)
T PRK13238        159 GNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDK  238 (460)
T ss_pred             CCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCC
Confidence              999999999873    689999999999997 999999999999999999999999997743  22211     1111


Q ss_pred             cccccCCCCCEEEEcccccccCCCCceE------EEEEeeCCCcchhHHHHHHHHhhhc-----c-cccCCchHHHHHHH
Q 014631          236 RMGVFGSTVPVITLGSMSKRWIVPGWRL------GWLVTSDPSGILQELRIVDSIKGYL-----N-ISSGPATFVQGAVP  303 (421)
Q Consensus       236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~------G~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~  303 (421)
                      ++..+     +..++|++|.+.+.|+++      |++++++       +++.++++...     . ..++.+...|.|++
T Consensus       239 si~~i-----~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala  306 (460)
T PRK13238        239 SIKEI-----AREMFSYADGLTMSAKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEALA  306 (460)
T ss_pred             CHHHH-----hhhhcccCcEEEEecccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHHH
Confidence            22111     111233344433333332      5566543       35677776553     1 12233455577777


Q ss_pred             HHhhcc-chhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc--cc-CCCChHHHHHHHHhhcCee
Q 014631          304 QIFKNT-KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LE-GISDDMEFALQLAKEESVI  379 (421)
Q Consensus       304 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~  379 (421)
                      ..|... .+.+...+    .++++++.+.|.+. |+. +..|.+|+|+++++....  .+ ....+.+++.+|+++.||.
T Consensus       307 ~~l~e~~~~~~~~~~----~~~~~~l~~~L~~~-G~~-~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~  380 (460)
T PRK13238        307 VGLYEGMDEDYLAYR----IGQVEYLGEGLEEA-GVP-IQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIR  380 (460)
T ss_pred             hhHHHhhChHHHHHH----HHHHHHHHHHHHHC-CCC-eEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCee
Confidence            666532 23333333    33578899999887 998 448999999999885421  11 0113578999999999999


Q ss_pred             EEeCCCCCC-------------CCeEEEEecC---CHHHHHHHHHHHHHHHHH
Q 014631          380 VLPGMAVGM-------------KNWLRITFAI---EPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       380 v~~g~~~~~-------------~~~iRi~~~~---~~e~l~~~~~~l~~~~~~  416 (421)
                      +.|+..|..             ...+|++++.   +.+.++.+.++|..+.++
T Consensus       381 ~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~  433 (460)
T PRK13238        381 GVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN  433 (460)
T ss_pred             eecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence            999887632             2679999985   999999999999987643

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=100.00  E-value=3.4e-33  Score=267.38  Aligned_cols=333  Identities=14%  Similarity=0.152  Sum_probs=248.0

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCC-------CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYSP-------SVGILPARRAIADYLNSELPCKL-SPDDVYL  114 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~-------~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~  114 (421)
                      ...++|+.+..+     +.|+.+.+++.+.+...... ..+.       ...+.++|+.++++++      + ++++|++
T Consensus        18 ~~~~yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~   86 (401)
T PRK10874         18 DAGVYLDSAATA-----LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLN------APDAKNIVW   86 (401)
T ss_pred             CceEEEeCCccc-----CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEE
Confidence            457899998755     57788999999888652110 0011       1125678888888873      4 6889999


Q ss_pred             cCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631          115 TAGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAM  186 (421)
Q Consensus       115 ~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i  186 (421)
                      |+|++++++.+++++    .++||+|++++++|++    +...++..|++++.++.+.  ++.+|++++++.++++++++
T Consensus        87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv  164 (401)
T PRK10874         87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL  164 (401)
T ss_pred             ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence            999999999999987    3789999999999865    4556678899999998753  45689999999999899999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEE
Q 014631          187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL  266 (421)
Q Consensus       187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  266 (421)
                      ++++|+||||..++   +++|.++|+++|+++|+|++|+...+    ...+..++.   .+++.|++|.|+.+|  +|++
T Consensus       165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l  232 (401)
T PRK10874        165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQALDI---DFYAFSGHKLYGPTG--IGVL  232 (401)
T ss_pred             EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchhcCC---CEEEEecccccCCCc--cEEE
Confidence            99999999999965   77888999999999999999975322    223333332   377889999987777  6999


Q ss_pred             EeeCCCcchhHHHHHHHHhhhc----------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631          267 VTSDPSGILQELRIVDSIKGYL----------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT  324 (421)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (421)
                      ++++        ++.+.+....                      ...++++...+.++.++++...+....+..++.+++
T Consensus       233 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l  304 (401)
T PRK10874        233 YGKS--------ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSL  304 (401)
T ss_pred             EEch--------HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            8852        3444433111                      112456767777777777653345566678888899


Q ss_pred             HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------CCCeEEEEe
Q 014631          325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------MKNWLRITF  396 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~iRi~~  396 (421)
                      ++++.+.|+++||+... .+..+.++++.++..      +..++... |.++||.+.+|..+.        ..+++|+|+
T Consensus       305 ~~~l~~~l~~~~g~~~~-~~~~~~i~~~~~~~~------~~~~~~~~-L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~  376 (401)
T PRK10874        305 ATLAEDALAKLPGFRSF-RCQDSSLLAFDFAGV------HHSDLVTL-LAEYGIALRAGQHCAQPLLAALGVTGTLRASF  376 (401)
T ss_pred             HHHHHHHHhcCCCEEEe-CCCCCcEEEEEECCc------CHHHHHHH-HHHCCcEEeccccchHHHHHHhCCCCEEEEEe
Confidence            99999999998898744 334445566566531      35566654 577899999988653        357999999


Q ss_pred             c--CCHHHHHHHHHHHHHHHHHh
Q 014631          397 A--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       397 ~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +  ++++|++++++.|+++++++
T Consensus       377 ~~~nt~edid~ll~al~~~~~~~  399 (401)
T PRK10874        377 APYNTQSDVDALVNAVDRALELL  399 (401)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHh
Confidence            8  89999999999999988764

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=100.00  E-value=4.4e-33  Score=266.29  Aligned_cols=333  Identities=15%  Similarity=0.150  Sum_probs=247.1

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCC-------CCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYSPS-------VGILPARRAIADYLNSELPCKL-SPDDVYL  114 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~-------~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~  114 (421)
                      .++++|+.+..+     +.|+.+.+++.+.+...... .+.+.       ..++++|+.++++++      + ++++|++
T Consensus        15 ~~~iyld~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~   83 (398)
T TIGR03392        15 DGTVYLDSAATA-----LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLN------APDAENIVW   83 (398)
T ss_pred             CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEE
Confidence            468999999855     57789999998887542111 12221       124578888998883      4 4789999


Q ss_pred             cCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631          115 TAGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAM  186 (421)
Q Consensus       115 ~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i  186 (421)
                      |+|++++++.++.++    .++||+|++++++|++    +...++..|++++.++.+.  ++.+|++++++.++++++++
T Consensus        84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv  161 (398)
T TIGR03392        84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL  161 (398)
T ss_pred             eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence            999999999999987    4789999999999976    4556678899999998753  35689999999998899999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEE
Q 014631          187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL  266 (421)
Q Consensus       187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  266 (421)
                      ++++|+||||..++   +++|.++|+++|+++++|++|+....    ...+..++.   .+++.|++|.++.+|  +||+
T Consensus       162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l  229 (398)
T TIGR03392       162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDI---DFYAFSGHKLYGPTG--IGVL  229 (398)
T ss_pred             EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCC---CEEEEecccccCCCc--eEEE
Confidence            99999999999965   77889999999999999999976321    223333332   267788999887666  8999


Q ss_pred             EeeCCCcchhHHHHHHHHhhhc----------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631          267 VTSDPSGILQELRIVDSIKGYL----------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT  324 (421)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (421)
                      ++++        ++.+.+....                      ...++++.....++.++++...+..+++..++.+++
T Consensus       230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l  301 (398)
T TIGR03392       230 YGKT--------ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSL  301 (398)
T ss_pred             EEcH--------HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            9853        3444442211                      012356666777777777653345566778888999


Q ss_pred             HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------CCCeEEEEe
Q 014631          325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------MKNWLRITF  396 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~iRi~~  396 (421)
                      ++++.+.|+++|++.+. .+..+.++++.++..      +..++... |.++||.+++|..+.        .++++|+|+
T Consensus       302 ~~~l~~~l~~l~g~~~~-~~~~~~i~~~~~~~~------~~~~l~~~-L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~  373 (398)
T TIGR03392       302 ADLAEERLAQLPGFRSF-RCPGSSLLAFDFAGV------HHSDLAAL-LAESGIALRAGQHCAQPLMAALGVSGTLRASF  373 (398)
T ss_pred             HHHHHHHHhcCCCeEEe-CCCCCcEEEEEeCCc------CHHHHHHH-HHhCCEEEecCccchHHHHHHhCCCCEEEEEe
Confidence            99999999998888733 333344565555421      35566655 467899999988653        357999999


Q ss_pred             c--CCHHHHHHHHHHHHHHHHHh
Q 014631          397 A--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       397 ~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +  ++++|++++++.|+++++++
T Consensus       374 ~~~~t~~ei~~l~~~l~~~~~~~  396 (398)
T TIGR03392       374 APYNTQQDVDALVDAVGAALELL  396 (398)
T ss_pred             eccCCHHHHHHHHHHHHHHHHHh
Confidence            8  89999999999999988764

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PLN02822 serine palmitoyltransferase

Probab=100.00  E-value=2e-33  Score=271.52  Aligned_cols=349  Identities=16%  Similarity=0.149  Sum_probs=254.3

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .|++++||+.+++   +++..++.+++++.+++++...      ..|++..++.+|+++++++++       .++.|+++
T Consensus       107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s  176 (481)
T PLN02822        107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS  176 (481)
T ss_pred             CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            4788999998873   3466799999999999987221      146666778999999999984       35788888


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh--ccCc-eEEEEeCCC
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA--DENT-VAMVIVNPG  192 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~--~~~~-~~i~~~~p~  192 (421)
                      +|++ ++..++++++++||.|++....|.++...+...|.+++.+++++.+++..+++++++..  .+++ ++|++..++
T Consensus       177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~  255 (481)
T PLN02822        177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY  255 (481)
T ss_pred             CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence            8877 57888999999999999998888887788888899999888754333333344433322  1234 567777778


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      +++|.+.+   +++|+++|++||+++|+||+|+.+.++  |.+......+...+..++++||||.|++.|   ||++++ 
T Consensus       256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~-  328 (481)
T PLN02822        256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGS-  328 (481)
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcC-
Confidence            99999977   789999999999999999999976665  333222222222345588899999998888   999985 


Q ss_pred             CCcchhHHHHHHHHhhhcc-cccC--CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631          271 PSGILQELRIVDSIKGYLN-ISSG--PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS  347 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~  347 (421)
                             +++++.+..... .+++  .++..+.++.++|+.. +. ..+..++++++++++.+.|++++|+. +..+.++
T Consensus       329 -------~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-~~-~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~s  398 (481)
T PLN02822        329 -------ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-ED-NPSVLAKLKENIALLHKGLSDIPGLS-IGSNTLS  398 (481)
T ss_pred             -------HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHH-Hh-CHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCC
Confidence                   356666654332 2223  3466777777777642 22 25678899999999999999877887 4466778


Q ss_pred             eEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCC--CCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          348 MFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMA--VGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~--~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +++++.++........+   ..+++.++++++||.+.|+..  |+.   +..+|++++  +++++|++++++|++++.+.
T Consensus       399 pi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~  478 (481)
T PLN02822        399 PIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV  478 (481)
T ss_pred             CEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence            89988886420000001   256888888788999998743  322   357999887  89999999999999998875


Q ss_pred             h
Q 014631          418 A  418 (421)
Q Consensus       418 ~  418 (421)
                      .
T Consensus       479 ~  479 (481)
T PLN02822        479 L  479 (481)
T ss_pred             h
Confidence            4

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.2e-32  Score=255.28  Aligned_cols=349  Identities=19%  Similarity=0.254  Sum_probs=270.9

Q ss_pred             hhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCC--CCCC----CCCCHHHHHHH
Q 014631           24 TLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFD--CYSP----SVGILPARRAI   95 (421)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~--~y~~----~~g~~~l~~~i   95 (421)
                      ...+|+.++.+++..    +.++++|+.+..+     +.|..+.+++.+...+.  +.+  .+..    ...+++.|+.+
T Consensus         5 ~~~~r~~fp~l~~~~----~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~v   75 (405)
T COG0520           5 VAAVRADFPALKREV----GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAV   75 (405)
T ss_pred             hHHHHhhCHHHhhcc----CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHH
Confidence            445788888877654    6788999988755     47889999999987642  221  1111    12467889999


Q ss_pred             HHHHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHh---cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCC
Q 014631           96 ADYLNSELPCKLS-PDDVYLTAGCKQAIQVILTVL---ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKG  167 (421)
Q Consensus        96 a~~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l---~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~  167 (421)
                      +++++      ++ .++|+||+|+|++++.++.++   .++||+|++....|++    |...++..|++++.+|++  ++
T Consensus        76 a~~~~------a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~  147 (405)
T COG0520          76 ARFLN------ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DD  147 (405)
T ss_pred             HHHhC------CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CC
Confidence            99984      56 489999999999999999998   5899999999999985    466667789999999986  34


Q ss_pred             ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631          168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI  247 (421)
Q Consensus       168 ~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  247 (421)
                      +.++.|++++.++++|+++.+++.+|.||++   .++++|+++|+++|+++++|.+|+.    +....++..++.+   +
T Consensus       148 g~~~~~~~~~~i~~~Tklvais~vSn~tG~~---~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f  217 (405)
T COG0520         148 GLLDLDALEKLITPKTKLVALSHVSNVTGTV---NPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---F  217 (405)
T ss_pred             CCcCHHHHHHhcCCCceEEEEECcccccccc---chHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---E
Confidence            4689999999999999999999999999999   5699999999999999999999987    5566677666665   8


Q ss_pred             EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-----------------------ccccCCchHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-----------------------NISSGPATFVQGAVPQ  304 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~  304 (421)
                      ++.|.+|+++.| ..+|+++++        +++.+.+....                       ...++++.....++.+
T Consensus       218 ~afsgHKwl~gP-~GiGvLy~r--------~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~a  288 (405)
T COG0520         218 LAFSGHKWLLGP-TGIGVLYVR--------KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAA  288 (405)
T ss_pred             EEEcccccccCC-CceEEEEEc--------hHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHH
Confidence            889999965555 238999996        35666552211                       1124566667777777


Q ss_pred             HhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          305 IFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       305 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      +++...+..++++.++.+++.+++.+.|+++|++.+...+.  .+..+.+.++..      ++.++...| .++||.++.
T Consensus       289 Al~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~------~~~dv~~~L-~~~gI~vr~  361 (405)
T COG0520         289 ALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI------HPHDVATLL-DEKGIAVRA  361 (405)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC------CHHHHHHHH-HhCCeEEEe
Confidence            77765567789999999999999999999999998543332  344555556532      467776655 667899999


Q ss_pred             CCCCCC--------CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          383 GMAVGM--------KNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       383 g~~~~~--------~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      |..+..        ...+|+|++  ++.||++++++.|+++.+
T Consensus       362 g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         362 GHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             ccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence            987753        355999999  899999999999998764

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=6.3e-33  Score=243.12  Aligned_cols=345  Identities=26%  Similarity=0.446  Sum_probs=263.7

Q ss_pred             HHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcC
Q 014631           64 PVAADAVVDAVRS--AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPK  140 (421)
Q Consensus        64 ~~v~~a~~~~~~~--~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~  140 (421)
                      ..+++.....++.  +.+..|..++|++-+|+.+|+|+.++.|++++|++|++|+|++.|+..++..++ .+.+.|+++-
T Consensus        89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPi  168 (475)
T KOG0258|consen   89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPI  168 (475)
T ss_pred             HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeec
Confidence            3344444444443  356689999999999999999999999999999999999999999999998875 5679999999


Q ss_pred             CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631          141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG  215 (421)
Q Consensus       141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~  215 (421)
                      |.|+-|...+...|...+.+.++.+++|.+|.++|++.+++     ++++++++||.||||.+++.+.+++|..+|.+++
T Consensus       169 PQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~  248 (475)
T KOG0258|consen  169 PQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEG  248 (475)
T ss_pred             CCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999887643     5788999999999999999999999999999999


Q ss_pred             cEEEEcccccccccCCC-Ccccccc----cCC----CCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631          216 IMVISDEVYDHLTFGST-PYVRMGV----FGS----TVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIK  285 (421)
Q Consensus       216 ~~li~De~~~~~~~~~~-~~~~~~~----~~~----~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~  285 (421)
                      ++++.||+|.+..|... .+.++..    ++.    .-.++.+.|.||.+.+ .|.|-||+-+-+-.     ++..+.+.
T Consensus       249 l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----prv~~qi~  323 (475)
T KOG0258|consen  249 LVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----PRVKQQIK  323 (475)
T ss_pred             eEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----hhHHHHHH
Confidence            99999999999888764 4444322    221    1235677899998755 68999998764322     34555555


Q ss_pred             hhcccccCCchHHHHHHHHHhhccc---------hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631          286 GYLNISSGPATFVQGAVPQIFKNTK---------EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      +......+++...|...........         ....+.+...++.+...+.+.++.++|+.|. .++|.||++..+..
T Consensus       324 Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~i~l  402 (475)
T KOG0258|consen  324 KLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQISL  402 (475)
T ss_pred             HHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeecccccC
Confidence            5544444666666666655554311         1233455677888899999999999999954 89999999887654


Q ss_pred             cc--c-----cCCCChHHHHHHHHhhcCeeEEeCCCCCCCC---eEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          357 SL--L-----EGISDDMEFALQLAKEESVIVLPGMAVGMKN---WLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       357 ~~--~-----~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~---~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +.  +     .+...+.-.+.+||+..||+++||++|+...   ++|.++-...  + +.+++++++-.++
T Consensus       403 P~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f  470 (475)
T KOG0258|consen  403 PPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEF  470 (475)
T ss_pred             CHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHH
Confidence            32  1     1222355567889999999999999998742   5888875333  3 6666666655443

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=5e-33  Score=245.39  Aligned_cols=370  Identities=21%  Similarity=0.226  Sum_probs=282.5

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCC-CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAF-PCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i   95 (421)
                      ++++..++++|.++...|+++.    .+..|||++|.-... .-.|.-+.|++|-...........|-+..|.+++.+.+
T Consensus         3 ~~i~~~p~DpIlgL~e~f~~D~----R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~   78 (396)
T COG1448           3 EKIEAAPADPILGLKEAFKADP----RPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAV   78 (396)
T ss_pred             cccccCCCCchhHHHHHHhcCC----CcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHH
Confidence            4577778999999999999766    688999999963322 22566778888777777776677899999999999999


Q ss_pred             HHHHhhhCCCC---CCCCcE--EEcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCc
Q 014631           96 ADYLNSELPCK---LSPDDV--YLTAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGW  168 (421)
Q Consensus        96 a~~l~~~~~~~---~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  168 (421)
                      ++++   ||.+   ...+++  +=|.|||.|+.+....+.  .+..+|++++|+|.++..+....|.++..+|.-+..+.
T Consensus        79 ~~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~  155 (396)
T COG1448          79 QKLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETK  155 (396)
T ss_pred             HHHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccc
Confidence            9999   5533   344455  457999999999998874  46678999999999999999999999999987666666


Q ss_pred             cCCHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC-ccccccc-CCC
Q 014631          169 EVDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP-YVRMGVF-GST  243 (421)
Q Consensus       169 ~~d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~-~~~  243 (421)
                      .+|.+.+.+.+.   ++..+++...+|||||..++.++|++|+++.++.|++.++|-+|.+|.-+.+. ...+..+ ...
T Consensus       156 ~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~  235 (396)
T COG1448         156 GLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG  235 (396)
T ss_pred             cccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC
Confidence            789999877664   34445555666999999999999999999999999999999999998744221 1112211 222


Q ss_pred             CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHH
Q 014631          244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKI  317 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~  317 (421)
                      ..++++.||||.|++.|.|+|.+.+-.++... ...+..+++... ..+++|+......+...|++..     +..+..+
T Consensus       236 ~~~lva~S~SKnfgLYgERVGa~~vva~~~~~-a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~M  314 (396)
T COG1448         236 PELLVASSFSKNFGLYGERVGALSVVAEDAEE-ADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEM  314 (396)
T ss_pred             CcEEEEehhhhhhhhhhhccceeEEEeCCHHH-HHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            33788999999999999999996664332111 123444444443 3567888888888888898633     2445667


Q ss_pred             HHHHHHHHHHHHHHhhcC-C--CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631          318 VDILRDTADICYDRIKEI-P--CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI  394 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~-~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi  394 (421)
                      ++++.++|..+.+.|++. +  .+. ....+.|||.+..+          +.+.+.+|.++++|++..+.        ||
T Consensus       315 r~Ri~~mR~~lv~~L~~~~~~~~f~-~i~~Q~GMFsy~Gl----------s~~QV~rLree~~IY~v~sG--------Ri  375 (396)
T COG1448         315 RQRILEMRQALVDALKALGAPRNFD-FIISQRGMFSYTGL----------SPEQVDRLREEFGIYLVASG--------RI  375 (396)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCcccc-hHhhcCceeecCCC----------CHHHHHHHHHhccEEEecCC--------ee
Confidence            888999999999999873 2  366 33677899988655          45667888899999998643        99


Q ss_pred             Eec-CCHHHHHHHHHHHHHH
Q 014631          395 TFA-IEPSALEEGLGRIKAF  413 (421)
Q Consensus       395 ~~~-~~~e~l~~~~~~l~~~  413 (421)
                      |++ .++.+++.++++|.++
T Consensus       376 ~vaGl~~~ni~~va~ai~~v  395 (396)
T COG1448         376 NVAGLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             eeccCChhhHHHHHHHHHhh
Confidence            998 8999999999999876

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=100.00  E-value=6e-32  Score=258.93  Aligned_cols=332  Identities=15%  Similarity=0.189  Sum_probs=244.7

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-C-------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-P-------SVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~-------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .++++|+.+..+     +.++.+.+++.+.+.....+... .       ...+.++|+.++++++.     .++++|++|
T Consensus        22 ~~~iYld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t   91 (406)
T PRK09295         22 LPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV   91 (406)
T ss_pred             CceEEEeCcccc-----cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence            468999999855     67888999999888642111111 1       11246788888888742     257899999


Q ss_pred             CCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631          116 AGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV  187 (421)
Q Consensus       116 ~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~  187 (421)
                      +|++++++.++.++    .++||+|++++++|++    +...++..|++++.++.++  ++.+|++++++.+++++++++
T Consensus        92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~  169 (406)
T PRK09295         92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA  169 (406)
T ss_pred             CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence            99999999998864    5799999999998875    3555677899999998753  345899999999988999999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +++|+||||.++|   +++|.++|+++|+++++|++|+..    ....++..++.   .+++.|++|.+|.+|  +||++
T Consensus       170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g----~~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l~  237 (406)
T PRK09295        170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVM----HHPVDVQALDC---DFYVFSGHKLYGPTG--IGILY  237 (406)
T ss_pred             EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccC----ccccCchhcCC---CEEEeehhhccCCCC--cEEEE
Confidence            9999999999976   788889999999999999999763    22333433333   377889999877666  79999


Q ss_pred             eeCCCcchhHHHHHHHHhh-----------------------hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631          268 TSDPSGILQELRIVDSIKG-----------------------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT  324 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (421)
                      +++        ++.+.+..                       .+...++++.....++.++++...+.+++.+.++.+++
T Consensus       238 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l  309 (406)
T PRK09295        238 VKE--------ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNL  309 (406)
T ss_pred             Ech--------HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            863        23332211                       01123467788888888888764445678888899999


Q ss_pred             HHHHHHHhhcCCCccccCCCC-ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------CCCeEEEE
Q 014631          325 ADICYDRIKEIPCITCPRKPE-GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------MKNWLRIT  395 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~iRi~  395 (421)
                      ++++.+.|++++++.+. .|. .+..+.+.++..      +..++.. .+.++||.++.|..+.        .++.+|+|
T Consensus       310 ~~~l~~~l~~~~~~~~~-~~~~~~~iv~~~~~~~------~~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS  381 (406)
T PRK09295        310 MHYALSQLESVPDLTLY-GPQNRLGVIAFNLGKH------HAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRAS  381 (406)
T ss_pred             HHHHHHHHhcCCCEEEe-CCCCCceEEEEEECCc------CHHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEE
Confidence            99999999998888743 442 122344444421      3555555 4578899999987553        24689999


Q ss_pred             ec--CCHHHHHHHHHHHHHHHH
Q 014631          396 FA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       396 ~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      ++  ++++|++++++.|+++..
T Consensus       382 ~~~ynt~~did~l~~~l~~i~~  403 (406)
T PRK09295        382 LAMYNTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH
Confidence            98  899999999999988754

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=100.00  E-value=7.3e-32  Score=259.63  Aligned_cols=337  Identities=15%  Similarity=0.220  Sum_probs=247.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--C---CCC---CCCCHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD--C---YSP---SVGILPARRAIADYLNSELPCKL-SPDDVY  113 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~---y~~---~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~  113 (421)
                      +.++++|+.+.+.     +.|+.+.+++.+.+......  .   |..   ...+.++|+.++++++      + ++++|+
T Consensus        30 ~~~~iyLd~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~   98 (424)
T PLN02855         30 GSKLVYLDNAATS-----QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIV   98 (424)
T ss_pred             CCCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEE
Confidence            4578999998855     67788999998887642111  1   111   1124688889999884      4 357999


Q ss_pred             EcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631          114 LTAGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA  185 (421)
Q Consensus       114 ~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~  185 (421)
                      +|+|+|++++.+++.+    +++||+|+++++.|++    +...++..|.+++.++++.+  +.+|++++++.+++++++
T Consensus        99 ~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~l  176 (424)
T PLN02855         99 FTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKL  176 (424)
T ss_pred             EeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceE
Confidence            9999999999998863    5789999999998875    34556778999999987543  348999999999889999


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      +++++|+||||..+|   +++|.++|+++|+++++|++|+.    |....++..++.   .+++.|++|.+|.+|  +||
T Consensus       177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~~~---d~~~~s~~K~~gp~G--~G~  244 (424)
T PLN02855        177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTLGA---DFLVASSHKMCGPTG--IGF  244 (424)
T ss_pred             EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhcCC---CEEEeecccccCCCc--cEE
Confidence            999999999999987   67888999999999999999965    322233333332   377899999876556  899


Q ss_pred             EEeeCCCcchhHHHHHHHHhhh----------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631          266 LVTSDPSGILQELRIVDSIKGY----------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD  323 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  323 (421)
                      +++++        ++.+.+...                      +...++++.....++.++++...+.+++++.++..+
T Consensus       245 l~~~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  316 (424)
T PLN02855        245 LWGKS--------DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVE  316 (424)
T ss_pred             EEEch--------hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            99863        233333211                      011235666777777777765445678888999999


Q ss_pred             HHHHHHHHhhcCCCccccCCCC------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------CCC
Q 014631          324 TADICYDRIKEIPCITCPRKPE------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------GMK  389 (421)
Q Consensus       324 ~~~~~~~~l~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~  389 (421)
                      +++++++.|++++++.+. .+.      .+.++.+.++..      +..++...|.+++||.+..|..+        +.+
T Consensus       317 l~~~l~~~L~~~~g~~i~-~~~~~~~~~r~~~v~~~~~~~------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~  389 (424)
T PLN02855        317 LGTYLYEKLSSVPGVRIY-GPKPSEGVGRAALCAFNVEGI------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVN  389 (424)
T ss_pred             HHHHHHHHHhcCCCEEEe-CCCcccccCcccEEEEEECCc------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCC
Confidence            999999999988888743 332      134555566521      35566666644459999988754        234


Q ss_pred             CeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          390 NWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       390 ~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .++|+|++  ++++|++++++.|++++..++.
T Consensus       390 ~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~  421 (424)
T PLN02855        390 ASARASLYFYNTKEEVDAFIHALKDTIAFFSS  421 (424)
T ss_pred             CeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            68999998  8999999999999999877653

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=100.00  E-value=6.9e-32  Score=250.41  Aligned_cols=308  Identities=15%  Similarity=0.159  Sum_probs=226.9

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           58 PCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        58 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      .++..+|.++++..+.++...    +...-+.+|++.+|+|+      +.+++++++++|+++++..++.++.++||+|+
T Consensus        30 lgl~~~~~~~~~~~~~~~~~~----g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vl   99 (346)
T TIGR03576        30 TGLAGGFKIDEEDLELLETYV----GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKVV   99 (346)
T ss_pred             ccCCCChhHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEEE
Confidence            335567888988888877631    22233567777777776      35789999999999999999999999999999


Q ss_pred             Ec---CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          138 LP---KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       138 ~~---~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      ++   .|+|.++...++..|+++..+         .++++++.  .+++++|+++ +++++|.+++.+++++|+++|+++
T Consensus       100 i~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~  167 (346)
T TIGR03576       100 HYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK  167 (346)
T ss_pred             ECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc
Confidence            74   579999999999999875322         14455433  2456766664 578999999999999999999999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccC
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSG  293 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  293 (421)
                      |+++|+||+|+.+..+.....+....+.   .++++||||.  ++|+|+||++++        +++++.+...... ..+
T Consensus       168 ~~~livDEAy~~~~~~~~~~~~~~~~~~---divv~s~SKa--laG~r~G~v~~~--------~~li~~l~~~~~~~~~s  234 (346)
T TIGR03576       168 EAIVLVDDASGARVRRLYGQPPALDLGA---DLVVTSTDKL--MDGPRGGLLAGR--------KELVDKIKSVGEQFGLE  234 (346)
T ss_pred             CCEEEEECCccccccccCCCCCHHHcCC---cEEEeccchh--ccccceEEEEeC--------HHHHHHHHHhhcCcccC
Confidence            9999999999986532111112122221   2667799994  789999999986        4677877776543 234


Q ss_pred             CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHH
Q 014631          294 PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLA  373 (421)
Q Consensus       294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  373 (421)
                      .+++.+.++.++|+...   .+..++.++++++.+.+.++++   . + .|..+.|+|++++..      ++.+++.+++
T Consensus       235 ~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~~~~f~~~~~~~~------~~~~~~~~ll  300 (346)
T TIGR03576       235 AQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL---N-V-ERTPTGFVIKGVEEE------KLIEIGLDLL  300 (346)
T ss_pred             ccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC---C-C-CcCCCeEEEEeCCCC------CHHHHHHHHH
Confidence            67788888888886422   3566778888888888888753   3 2 233344899888631      3567888999


Q ss_pred             hhcCeeEEeCCCCC-CCCeEEEEecCCHH---HHHHHHHHHHHHH
Q 014631          374 KEESVIVLPGMAVG-MKNWLRITFAIEPS---ALEEGLGRIKAFC  414 (421)
Q Consensus       374 ~~~gv~v~~g~~~~-~~~~iRi~~~~~~e---~l~~~~~~l~~~~  414 (421)
                      +++||.++||..|. .++++|||++.+++   +.+.+++.|++.+
T Consensus       301 ~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       301 RNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             HhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence            99999999998874 47899999997665   7899999987754

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=100.00  E-value=1.4e-31  Score=256.65  Aligned_cols=334  Identities=17%  Similarity=0.219  Sum_probs=244.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CC--CC----CCCCCHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DC--YS----PSVGILPARRAIADYLNSELPCKLS-PDDVY  113 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~--y~----~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~  113 (421)
                      +.++++|++|...     +.|+.+.+++.+.+.....  +.  +.    ....++++|+.++++++      .+ +++|+
T Consensus        16 ~~~~~yld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~   84 (403)
T TIGR01979        16 GKPLVYLDSAATS-----QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIV   84 (403)
T ss_pred             CCceEEEeCcccc-----CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEE
Confidence            6688999999855     5678899999887764211  10  10    01235688899999884      44 67999


Q ss_pred             EcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcch----HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631          114 LTAGCKQAIQVILTVL----ARPGANILLPKPGFPLY----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA  185 (421)
Q Consensus       114 ~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~  185 (421)
                      +|+|++++++.++.++    .++||+|+++++.|++.    ...+...|.+++.++.+  .++.+|++++++.+.+++++
T Consensus        85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l  162 (403)
T TIGR01979        85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL  162 (403)
T ss_pred             EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence            9999999999998875    57899999999988764    34556789999999875  34568999999999889999


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      +++++|+||||..++   +++|.++|+++|+++|+|++|+..    .....+..++   ..+++.|++|.+|.+|  +|+
T Consensus       163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g----~~~~~~~~~~---~d~~~~s~~K~~gp~G--~g~  230 (403)
T TIGR01979       163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVP----HMPVDVQALD---CDFYVFSGHKMYGPTG--IGV  230 (403)
T ss_pred             EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcC----ccccCccccC---CCEEEEecccccCCCC--ceE
Confidence            999999999999976   788899999999999999999763    2222333332   3488889999987666  899


Q ss_pred             EEeeCCCcchhHHHHHHHHhhhc----------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631          266 LVTSDPSGILQELRIVDSIKGYL----------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD  323 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  323 (421)
                      +++++        ++.+.+....                      ...++++.....++.++++...+.+.++..++..+
T Consensus       231 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~  302 (403)
T TIGR01979       231 LYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE  302 (403)
T ss_pred             EEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            98853        3334332110                      01135666667777777764333456778889999


Q ss_pred             HHHHHHHHhhcCCCccccCCCCc----eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC--------CCCCCe
Q 014631          324 TADICYDRIKEIPCITCPRKPEG----SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA--------VGMKNW  391 (421)
Q Consensus       324 ~~~~~~~~l~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--------~~~~~~  391 (421)
                      +++.+.+.|++++++.+. .|..    +.++.+.++..      +..++.. .++++||.+.+|..        ++.+++
T Consensus       303 l~~~l~~~l~~~~g~~~~-~~~~~~~~~~~v~~~~~~~------~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~  374 (403)
T TIGR01979       303 LTAYALERLGEIPGLRIY-GPRDAEDRGGIISFNVEGV------HPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPAT  374 (403)
T ss_pred             HHHHHHHHHhcCCCEEEe-CCCCccccCceEEEEeCCc------CHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCE
Confidence            999999999988888743 4431    33555555421      3445554 55788999998763        334678


Q ss_pred             EEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          392 LRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +|+|++  ++++|++++++.|+++++.+
T Consensus       375 iRiS~~~~~t~~di~~l~~~l~~~~~~~  402 (403)
T TIGR01979       375 CRASFYIYNTEEDIDALVEALKKVRKFF  402 (403)
T ss_pred             EEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            999998  78999999999999887754

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=100.00  E-value=1.9e-31  Score=254.86  Aligned_cols=331  Identities=17%  Similarity=0.166  Sum_probs=236.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CC----HHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSV---GI----LPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~----~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      .|+++|||+.|++   ++++.+|.+++++.+.+.+.. ..|+++.   |.    .++|+++|++++        .+++++
T Consensus        36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii  103 (393)
T TIGR01822        36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL  103 (393)
T ss_pred             CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence            4789999999973   356788999999999987632 2565555   65    789999999984        246777


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEE
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVI  188 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~  188 (421)
                      ++|+++|+..++.+++++||.|++++|+|+++...++..+.+...++       ..|++++++.+++      ++++|++
T Consensus       104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~  176 (393)
T TIGR01822       104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT  176 (393)
T ss_pred             ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence            78899999999999999999999999999999888888777664442       2588899887764      6677777


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC--CCcccccccCCCCCEEEEcccccccCCCCceEEEE
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS--TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL  266 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  266 (421)
                      .+++||||.+.   ++++|+++|++||+++|+||+|+....+.  .+........ .+..++++|+||++  +|+|+||+
T Consensus       177 ~~v~~~tG~~~---~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~~  250 (393)
T TIGR01822       177 DGVFSMDGVIA---PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGFT  250 (393)
T ss_pred             eCCccCCCCcC---CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEEE
Confidence            78899999995   48999999999999999999996433221  1111111221 13458889999985  46799999


Q ss_pred             EeeCCCcchhHHHHHHHHhhhc-c--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Q 014631          267 VTSDPSGILQELRIVDSIKGYL-N--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK  343 (421)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~  343 (421)
                      +++        +++.+.+.... .  ...+.++..+.++.++++..  ...++.+++++++++++.+.|++. |+. +..
T Consensus       251 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~  318 (393)
T TIGR01822       251 TAR--------KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFD-IKP  318 (393)
T ss_pred             EeC--------HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CCC
Confidence            885        34666665432 1  22233445555556666431  234567788999999999999876 777 323


Q ss_pred             CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----MKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +. +.++.+.++..     .+..+++..|+ ++||.+. +..|.    ....+|++++  ++++++++++++|+++.+++
T Consensus       319 ~~-~~~~~i~~~~~-----~~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~  390 (393)
T TIGR01822       319 AD-HPIIPVMLYDA-----VLAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL  390 (393)
T ss_pred             CC-CCEEEEEeCCH-----HHHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            33 33444444321     13566777765 4599987 44442    1246999987  78999999999999987754

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=100.00  E-value=6.8e-31  Score=251.72  Aligned_cols=337  Identities=16%  Similarity=0.111  Sum_probs=238.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .|+++|||+.|++   ++++.++.+.+++.+.+.....  ..|....|..++++.+++++.+.+|.   +++|++|+| +
T Consensus        40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~  112 (397)
T PRK06939         40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F  112 (397)
T ss_pred             CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence            4788999999873   3467889999999998876321  12223467889999999999887772   367888877 7


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCC
Q 014631          120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGN  193 (421)
Q Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~n  193 (421)
                      +++..++.+++++||.|++++|+|+++...+...|.+++.++.       .|++++++.+++      ++++++..+.+|
T Consensus       113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~  185 (397)
T PRK06939        113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS  185 (397)
T ss_pred             HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence            7888889999999999999999999998888888988777653       377888776653      456666556789


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      ++|..   +++++|.++|++||+++|+||+|+...+.  +........+. .+..++++|+||+++  |.|+||++++  
T Consensus       186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~--g~r~G~v~~~--  257 (397)
T PRK06939        186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKALG--GASGGYTAGR--  257 (397)
T ss_pred             CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHhC--ccCceEEEeC--
Confidence            99986   67999999999999999999999642222  22111221222 134588999999973  5689999986  


Q ss_pred             CcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631          272 SGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM  348 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  348 (421)
                            +++++.+.....   ...++++..+.++.++++...  ..++.+++++++++.+.+.|+++ ++. ...+.+++
T Consensus       258 ------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~  327 (397)
T PRK06939        258 ------KEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFT-LGPGEHPI  327 (397)
T ss_pred             ------HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCCCCE
Confidence                  346666654322   122334444555555554321  13567788999999999999887 666 33455544


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      + ++.++..     .++.+++..+++ +||.+.++.+..   ...++|++++  ++++++++++++|+++++++
T Consensus       328 ~-~~~~~~~-----~~~~~~~~~L~~-~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        328 I-PVMLGDA-----KLAQEFADRLLE-EGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             E-EEEECCH-----HHHHHHHHHHHH-CCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            3 3334321     135667777655 499998654322   1368999986  78999999999999998765

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=9e-31  Score=247.63  Aligned_cols=327  Identities=15%  Similarity=0.152  Sum_probs=233.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVG----ILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .|..++||+.|+|   .+++.++.+++++.+++.....  ..|....|    ..+++++++++++       .++.|+++
T Consensus        14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~   83 (360)
T TIGR00858        14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS   83 (360)
T ss_pred             CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            5889999999953   2346778999999998875211  11222223    3467777777763       25677777


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCC
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNP  191 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p  191 (421)
                      +|+++ +..++..++++||+|++++|+|..+...+...|.+++.++.       +|++++++.+++    +++++++.++
T Consensus        84 ~G~~~-~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~  155 (360)
T TIGR00858        84 SGYLA-NVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV  155 (360)
T ss_pred             chHHH-HHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence            77555 44567788899999999999999999989999988877653       478888887754    3567777888


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC--cccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP--YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      +|+||..   .++++|.++|+++|+++|+||+|+.+.+++..  ...+..+..++++++++||||+|+++|   ||++++
T Consensus       156 ~~~~G~~---~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~  229 (360)
T TIGR00858       156 FSMDGDI---APLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS  229 (360)
T ss_pred             ccCCCCC---cCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence            9999988   45888999999999999999999876554322  122223334567899999999998766   999875


Q ss_pred             CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                              +++.+.+.....   ...+.++..+.++.++++..  ....+.+++++++++++.+.|+++ ++. + .+..
T Consensus       230 --------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~  296 (360)
T TIGR00858       230 --------QALIDYLINRARTLIFSTALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFT-L-MPSC  296 (360)
T ss_pred             --------HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCc-c-CCCC
Confidence                    246666543322   12234555555666666532  123566789999999999999987 676 4 3556


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHH
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIK  411 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~  411 (421)
                      ++++|+.++...     ++.++...+ .++||.+.++..+..   .+++|++++  ++++++++++++|+
T Consensus       297 ~~~~~~~~~~~~-----~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       297 TPIVPVIIGDNA-----SALALAEEL-QQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             CCEEEEEeCCHH-----HHHHHHHHH-HHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence            778888876321     245676665 567999998765532   358999998  69999999998863

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=1.1e-30  Score=249.79  Aligned_cols=339  Identities=14%  Similarity=0.168  Sum_probs=237.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|.+++||..|.+....+ +.+|.+.+++.+++....   +.......++++.+++++.+..+    .+++++++||++|
T Consensus        37 dg~~~iD~~~g~~~~~lG-~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~eA  108 (396)
T PRK02627         37 DGKEYLDFLAGIAVNNLG-HCHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAEA  108 (396)
T ss_pred             CCCEEEECCccHHhccCC-CCCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHHH
Confidence            588999999987664332 346899999999987632   11122235788888888877543    4799999999999


Q ss_pred             HHHHHHHhcCCC-------CeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCCc----cCCHHHHHhhhccCceEE
Q 014631          122 IQVILTVLARPG-------ANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKGW----EVDLDGLEALADENTVAM  186 (421)
Q Consensus       122 l~~~~~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~----~~d~e~l~~~~~~~~~~i  186 (421)
                      +..+++.+...+       ++|++.+++|+++...+...+....    ..+..  .++    ..|++++++.+.++++++
T Consensus       109 ~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~v  186 (396)
T PRK02627        109 NEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITDKTAAV  186 (396)
T ss_pred             HHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCCCeEEE
Confidence            999999765433       6799999999988655544432221    11111  111    128899999988788888


Q ss_pred             EEeCCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          187 VIVNPGNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       187 ~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      ++..++||+| ..++++.+++|.++|++||+++|+||+|+++.+.|.. ......+...+   +.||||.++ +|+|+||
T Consensus       187 ii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~rig~  261 (396)
T PRK02627        187 MLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPD---IMTLAKGLG-GGVPIGA  261 (396)
T ss_pred             EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCC---EEEEcchhh-CCcccEE
Confidence            8888899999 6789999999999999999999999999988766642 22222222222   237999987 8999999


Q ss_pred             EEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Q 014631          266 LVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRK  343 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~  343 (421)
                      ++++        +++++.+.... ..+.+.+++.+.++.++|+... +...++.++..+..++.+.+.+.+++.+. . .
T Consensus       262 ~~~~--------~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~  331 (396)
T PRK02627        262 VLAK--------EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIK-E-V  331 (396)
T ss_pred             EEEc--------HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCee-e-e
Confidence            9986        35666665432 2345788899999988887532 22333333334444444444444443333 2 2


Q ss_pred             CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +..|.++|++++.       +..+++..+++ +||.+.|+.    .+++|++++  .+++++++++++|+++++++
T Consensus       332 ~~~g~~~~i~~~~-------~~~~~~~~l~~-~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~  395 (396)
T PRK02627        332 RGLGLMIGIELDR-------PAAEIVKKALE-KGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL  395 (396)
T ss_pred             ccCcEEEEEEecC-------cHHHHHHHHHH-CCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence            3357788988842       46677777654 599999864    367999875  78999999999999998764

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=100.00  E-value=4e-30  Score=245.20  Aligned_cols=338  Identities=16%  Similarity=0.180  Sum_probs=240.4

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..|++++||+.|++   ++++.++.+.+++.+++.+.  ....|....|..++++.+++++.+.+|.   ++.+++++| 
T Consensus        30 ~~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-  102 (385)
T TIGR01825        30 VNGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-  102 (385)
T ss_pred             ECCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-
Confidence            34789999998862   34678899999999998753  1235777789999999999999887762   456777777 


Q ss_pred             HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCCCCC
Q 014631          119 KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNPGNP  194 (421)
Q Consensus       119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p~np  194 (421)
                      ++++..++.+++++||.|++++|.|.++...+...|.++..++       .+|++++++.+.+    +++++++.+++||
T Consensus       103 ~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~  175 (385)
T TIGR01825       103 FNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSM  175 (385)
T ss_pred             HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcC
Confidence            5566678888899999999999999998888788887776553       2677888776643    5677777777999


Q ss_pred             cccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      ||.+.+   +++|.++|++||+++|+||+|+.+.++  +.........+ .+.++++.||||+|+++|   ||++++   
T Consensus       176 tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~---  245 (385)
T TIGR01825       176 DGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGH---  245 (385)
T ss_pred             CCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecC---
Confidence            999855   788999999999999999999876554  22111111222 346788999999997766   998874   


Q ss_pred             cchhHHHHHHHHhhhcc--c-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631          273 GILQELRIVDSIKGYLN--I-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF  349 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~  349 (421)
                           +++.+.+.....  . ....++..+.++.++++...+  ..+..++++++++++.+.|+++ |+. +..|.+. +
T Consensus       246 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~-~  315 (385)
T TIGR01825       246 -----KELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYD-TGGSETP-I  315 (385)
T ss_pred             -----HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCCC-E
Confidence                 346666654322  1 223456667777777753211  1245667778899999999886 777 4345544 4


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +++.++..     .+..+++..++++ ||.+.++....   ....+|++++  ++++++++++++|+++++++.
T Consensus       316 ~~~~~~~~-----~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~~  383 (385)
T TIGR01825       316 TPVVIGDE-----KAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG  383 (385)
T ss_pred             EEEEECCH-----HHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHhC
Confidence            44444321     1245677776555 99885432222   1367999886  899999999999999987643

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PLN02483 serine palmitoyltransferase

Probab=100.00  E-value=3.1e-30  Score=249.85  Aligned_cols=335  Identities=15%  Similarity=0.127  Sum_probs=229.8

Q ss_pred             CCCeeeccCCCCCCCCCCC-CcHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           43 PRPIIPLGHGDPSAFPCFR-TTPVAADAVVDAVRSA------EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      +++.+||++.+   +.++. .++...+++.+++++.      .-..|+...++.++|+.+|++++       .++.|+++
T Consensus        99 ~~~~~n~~s~~---YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~  168 (489)
T PLN02483         99 TRRCLNLGSYN---YLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFG  168 (489)
T ss_pred             CceEEEeecCC---ccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEEC
Confidence            56778888776   44444 2333444444444331      12247777788999999999994       35677776


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-------cC-----c
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-------EN-----T  183 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-------~~-----~  183 (421)
                      +| ..++..++.+++++||.|++++++|.++...++..|++++.++.+       |++++++.++       ++     .
T Consensus       169 ~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~  240 (489)
T PLN02483        169 MG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK  240 (489)
T ss_pred             CH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence            65 445557777889999999999999999999999999999998853       3444444332       22     2


Q ss_pred             eEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCC
Q 014631          184 VAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPG  260 (421)
Q Consensus       184 ~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  260 (421)
                      ++++++++ .|++|.+   .++++|+++|++||+++|+||+|+....+  |.+...+...+..+..|+++||||+|++.|
T Consensus       241 k~livve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G  317 (489)
T PLN02483        241 KIIVIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG  317 (489)
T ss_pred             eEEEEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc
Confidence            55666666 5899999   56999999999999999999999854332  322233333344455688999999998877


Q ss_pred             ceEEEEEeeCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhc----cchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          261 WRLGWLVTSDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKN----TKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                         ||++++        +++++.+.....   ...+.++....++.++|+.    .......+.+++++++++++.+.|+
T Consensus       318 ---G~i~~~--------~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~  386 (489)
T PLN02483        318 ---GYIAGS--------KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQ  386 (489)
T ss_pred             ---eEEEcC--------HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHH
Confidence               999875        467777776532   1222333333334444431    1123445567889999999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLG  408 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~  408 (421)
                      ++ |+. +..+.+++..|+.+....     +..++..+|+ ++||.+.+..++..   .+.+|++++  +++|+|+++++
T Consensus       387 ~~-G~~-v~~~~~sp~~~l~l~~~~-----~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~  458 (489)
T PLN02483        387 KM-GFE-VLGDNDSPVMPIMLYNPA-----KIPAFSRECL-KQNVAVVVVGFPATPLLLARARICISASHSREDLIKALE  458 (489)
T ss_pred             HC-CCc-ccCCCCCCEEEEEECCHH-----HHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence            88 776 435555666666554221     2346777665 56999997333222   367999997  79999999999


Q ss_pred             HHHHHHHHh
Q 014631          409 RIKAFCQRH  417 (421)
Q Consensus       409 ~l~~~~~~~  417 (421)
                      +|.++++.+
T Consensus       459 ~L~~~~~~~  467 (489)
T PLN02483        459 VISEVGDLV  467 (489)
T ss_pred             HHHHHHHHh
Confidence            999988764

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=100.00  E-value=2.7e-30  Score=247.64  Aligned_cols=333  Identities=17%  Similarity=0.177  Sum_probs=230.1

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ++++++|+..+   +.++..+|.+++++.++++....      ..|+....+.+|++.++++++       .++.+++++
T Consensus        45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~s  114 (410)
T PRK13392         45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTS  114 (410)
T ss_pred             CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECc
Confidence            45678888866   45577899999999998876321      123333235789999999873       245666666


Q ss_pred             CHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh----ccCceEEEEeC
Q 014631          117 GCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA----DENTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~----~~~~~~i~~~~  190 (421)
                      | ++++..++..+.  .+||.|+++...|.++...+...|.++..++.+       |.+.+++.+    .+++++|++++
T Consensus       115 G-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~t~~v~i~~  186 (410)
T PRK13392        115 G-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVDPDRPKLIAFES  186 (410)
T ss_pred             H-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhccCCCCEEEEEeC
Confidence            5 567777777664  488988888878888877888889887666431       333444433    34788999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      |+||||.+++   +++|.++|++||+++|+||+|+...++..+.......+..++ .++++||||.|+++|   ||++++
T Consensus       187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~  260 (410)
T PRK13392        187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS  260 (410)
T ss_pred             CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence            9999999976   888889999999999999999954443221111111111112 377899999999888   898874


Q ss_pred             CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                              +++++.+.....   .+.+.+++.+.++.++|+...  .....+++++++++++.+.|+++ |+. +..+. 
T Consensus       261 --------~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-  327 (410)
T PRK13392        261 --------ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNAN-GIP-VMPSP-  327 (410)
T ss_pred             --------HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCC-
Confidence                    356666655442   233455677888878886422  22345577889999999999987 777 43444 


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +.++.+.++..     ....++..+|++++||.+.++..+..   ..++|++++  +++++++++++.|.++++++
T Consensus       328 ~~~~~i~~~~~-----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~  398 (410)
T PRK13392        328 SHIVPVMVGDP-----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL  398 (410)
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence            44444444321     02456777776778999998754432   368999997  89999999999999988764

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=100.00  E-value=5.5e-30  Score=244.47  Aligned_cols=334  Identities=17%  Similarity=0.157  Sum_probs=229.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .|.++|||+.|.+   +++++++.+++++.+++....  ...|....|...+++.+++.+.+.++   .++.++++ +++
T Consensus        37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~-~g~  109 (385)
T PRK05958         37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFS-SGY  109 (385)
T ss_pred             CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEC-cHH
Confidence            5899999999862   345577899999999987521  11222233444444444444444444   24445555 555


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC---ceEEEEeCCCCCcc
Q 014631          120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN---TVAMVIVNPGNPCG  196 (421)
Q Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~---~~~i~~~~p~nptG  196 (421)
                      +++..++..++++||.|++++|.|..+...+...|.+++.++.       .|++.+++.+++.   +.++++.+++|++|
T Consensus       110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G  182 (385)
T PRK05958        110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG  182 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence            6666677888899999999999999998888888988887763       3788888877542   44455556789999


Q ss_pred             cccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcc
Q 014631          197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI  274 (421)
Q Consensus       197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  274 (421)
                      ..   .++++|.++|++||+++|+||+|+.+.++  |........++..++++++.|+||+|+.+|   ||++++     
T Consensus       183 ~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~-----  251 (385)
T PRK05958        183 DL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS-----  251 (385)
T ss_pred             Cc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC-----
Confidence            88   55899999999999999999999765443  222222223344456799999999998776   888775     


Q ss_pred             hhHHHHHHHHhhhc-c--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631          275 LQELRIVDSIKGYL-N--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM  351 (421)
Q Consensus       275 ~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~  351 (421)
                         +++.+.+.... .  ...++++..+.++.++++.... . .+..+++.++++++.+.|+++ ++. +..+. +.+++
T Consensus       252 ---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~-~~~~~  323 (385)
T PRK05958        252 ---ETLIDYLINRARPFIFTTALPPAQAAAARAALRILRR-E-PERRERLAALIARLRAGLRAL-GFQ-LMDSQ-SAIQP  323 (385)
T ss_pred             ---HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHHHHHHHHc-CCC-cCCCC-CCEEE
Confidence               24555554322 1  1234555665666666754221 1 566788899999999999987 676 43444 55777


Q ss_pred             EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      +.++..     .++.++...+ .++||.+.++..+.   .++++|++++  ++++++++++++|.+++
T Consensus       324 ~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~  385 (385)
T PRK05958        324 LIVGDN-----ERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL  385 (385)
T ss_pred             EEeCCH-----HHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence            777532     1345677766 56799999855432   2468999998  69999999999998753

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=9.8e-31  Score=235.80  Aligned_cols=338  Identities=17%  Similarity=0.178  Sum_probs=254.7

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-----CCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-----EFDCYS--PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-----~~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .|+|+...++     |..+++.++|...+...     ..+.|+  ....+++.|+.||+.+      ++++++|+||+|+
T Consensus         2 miYlD~~ATT-----p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~   70 (386)
T COG1104           2 MIYLDNAATT-----PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGA   70 (386)
T ss_pred             cccccccccC-----CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCC
Confidence            3667777655     77899999999988762     123333  1234678899999998      5788999999999


Q ss_pred             HHHHHHHHHHh--c----CCCCeEEEcCCCCcchHHHHhhc---CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe
Q 014631          119 KQAIQVILTVL--A----RPGANILLPKPGFPLYEANARHT---RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV  189 (421)
Q Consensus       119 ~~al~~~~~~l--~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~  189 (421)
                      ||+.++++...  .    +.|.+|+++.-.|++....++.+   |.++.+++++.  ++.+|+|+|++++++++.+|.+.
T Consensus        71 TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim  148 (386)
T COG1104          71 TESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIM  148 (386)
T ss_pred             cHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEE
Confidence            99999999873  2    25789999999999987777666   99999999865  44699999999999999999999


Q ss_pred             CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      ..||.+|++   +++++|.++|+++++++++|.+++.    |.-+.++..+..+   +...|-||..|..|  +|+++++
T Consensus       149 ~aNnE~G~I---QpI~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~  216 (386)
T COG1104         149 HANNETGTI---QPIAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVR  216 (386)
T ss_pred             ecccCeeec---ccHHHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEEC
Confidence            999999999   6799999999999999999999987    6555555554432   44558889988888  7999874


Q ss_pred             CCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC-CCccccCCCCc-
Q 014631          270 DPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI-PCITCPRKPEG-  346 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~-  346 (421)
                      +.....   .++..-.+. ....++.|.+...+..++++. ....++....++..+++.+.+.|.+. |.+.+...+.. 
T Consensus       217 ~~~~~~---p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~r  292 (386)
T COG1104         217 PGVRLE---PLIHGGGQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPR  292 (386)
T ss_pred             CCCccC---ceeccCcCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccC
Confidence            321110   111111111 123457788888888888874 45667888889999999999999975 77763222212 


Q ss_pred             -eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHH
Q 014631          347 -SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALE  404 (421)
Q Consensus       347 -~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~  404 (421)
                       ...+.+.|+.-      ..+.++. .+..+||.+..|+.|..                   ++.+|+|++  ++++|++
T Consensus       293 lP~~~~~~f~gv------~gE~ll~-~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~  365 (386)
T COG1104         293 LPNILNFSFPGV------EGESLLL-ALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEID  365 (386)
T ss_pred             CCCeEEEEeCCC------cHHHHHH-hccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHH
Confidence             23444555532      3455544 45888999999998843                   368999998  7899999


Q ss_pred             HHHHHHHHHHHHhhh
Q 014631          405 EGLGRIKAFCQRHAK  419 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~  419 (421)
                      .+++.|.+++++++.
T Consensus       366 ~~~~~l~~~i~~lr~  380 (386)
T COG1104         366 AAAEALKEIIKRLRE  380 (386)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999998865

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=100.00  E-value=2.6e-30  Score=243.89  Aligned_cols=319  Identities=16%  Similarity=0.134  Sum_probs=227.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      .+.++.+.+++.+.+..   ..|... .-..++++.+++++    |  +++ +.+++++|+++++..++.++.++||+|+
T Consensus         8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~----g--~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl   78 (356)
T cd06451           8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF----Q--TENGLTFLLSGSGTGAMEAALSNLLEPGDKVL   78 (356)
T ss_pred             cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh----c--CCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence            36778888888654321   223211 11346666666666    3  433 4578899999999999999999999999


Q ss_pred             EcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          138 LPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       138 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      ++.++|++  +...++..|++++.++.++  ++.+|++++++.+++ +++++++++|+||+|.+++   +++|.++|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~  153 (356)
T cd06451          79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH  153 (356)
T ss_pred             EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence            99988876  4677788999999998754  356899999999887 8899999999999999966   77788889999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh---hc---
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG---YL---  288 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~~---  288 (421)
                      |+++++|++|+.    |....++...+.   .+++.|++|+|+.| .++||+++++        ++++.+..   ..   
T Consensus       154 ~~~li~D~~~~~----g~~~~~~~~~~~---d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~~~  217 (356)
T cd06451         154 DALLIVDAVSSL----GGEPFRMDEWGV---DVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKGFY  217 (356)
T ss_pred             CCEEEEeeehhc----cCccccccccCc---cEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCcee
Confidence            999999999874    222222222222   25677899998754 3589999863        34444432   00   


Q ss_pred             --------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEE
Q 014631          289 --------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMV  352 (421)
Q Consensus       289 --------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~  352 (421)
                                    ...++++...+.++.++++......+++..++.+++++++.+.|.++ |+.....+.  .+.+.|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~  296 (356)
T cd06451         218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAV  296 (356)
T ss_pred             ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEE
Confidence                          11234555556666666665344567788888999999999999987 776332222  2344566


Q ss_pred             ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      .++..     .+..+++..|.+++||.+.+|..+..++++|++++  ++++++++++++|++++
T Consensus       297 ~~~~~-----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~  355 (356)
T cd06451         297 LVPEG-----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL  355 (356)
T ss_pred             ECCCC-----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            66532     14567777664444999999876655679999997  78999999999999876

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=1.3e-29  Score=241.38  Aligned_cols=339  Identities=14%  Similarity=0.164  Sum_probs=227.0

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|....+.+. .+|.+.+++.+++++...  .+.. ...+....+++.+.+..    ..+++++++||++
T Consensus        28 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~sGse   99 (389)
T PRK01278         28 EDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSNL-YRIPEQERLAERLVENS----FADKVFFTNSGAE   99 (389)
T ss_pred             CCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--cccc-cCChHHHHHHHHHHhhC----CCCEEEEcCCcHH
Confidence            34889999988765444443 789999999999886211  1111 11233334444443322    2468999999999


Q ss_pred             HHHHHHHHh----cCCCC----eEEEcCCCCcchHHHHhhcCceeEeeec-cC-CCCcc----CCHHHHHhhhccCceEE
Q 014631          121 AIQVILTVL----ARPGA----NILLPKPGFPLYEANARHTRLEIRHFDL-LP-EKGWE----VDLDGLEALADENTVAM  186 (421)
Q Consensus       121 al~~~~~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~d~e~l~~~~~~~~~~i  186 (421)
                      |+..+++++    ..+||    +|++.+++|+++...+...+........ .+ ..++.    .|++++++.+++++++|
T Consensus       100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~av  179 (389)
T PRK01278        100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAI  179 (389)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEE
Confidence            999998876    34565    8999999999987766655543222210 00 11111    48999999988778888


Q ss_pred             EEeCCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          187 VIVNPGNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       187 ~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      ++..++|++| ..+|.+++++|.++|++||+++|+||+|+++.+.|..+ .....+....   +.||||.++ +|+|+||
T Consensus       180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~  254 (389)
T PRK01278        180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGA  254 (389)
T ss_pred             EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEE
Confidence            7776688888 78899999999999999999999999999887766532 2112222212   348999975 8999999


Q ss_pred             EEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh----hcCCCccc
Q 014631          266 LVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI----KEIPCITC  340 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~g~~~  340 (421)
                      +++++        ++++.+..... .+.+.+++.+.++.++|+...+..   ..++++++.+.+.+.|    ++.+++..
T Consensus       255 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~  323 (389)
T PRK01278        255 CLATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIE  323 (389)
T ss_pred             EEEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence            99863        46666654432 345788899999888886422211   1222223333333333    23332211


Q ss_pred             cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                      ...+ .|.+++++++.       +..+++.++++ +||.+.|+.    .+++|++++  .+++++++++++|.+++++
T Consensus       324 ~v~g-~G~~~~i~~~~-------~~~~~~~~l~~-~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        324 EVRG-KGLLLGLKCVV-------PNRDLVQALRD-EGLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES  388 (389)
T ss_pred             eEec-ccEEEEEEEec-------CHHHHHHHHHH-CCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence            2133 46777877742       35677777755 599999974    478999976  7899999999999998865

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=100.00  E-value=5.8e-30  Score=245.04  Aligned_cols=324  Identities=16%  Similarity=0.164  Sum_probs=229.0

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF---DCYSPSVG----ILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      +++|+.+.+.     ++|+.+++++.+.+.....   ..|....+    +.++|+.++++++      +++++|++++|+
T Consensus        18 ~~yl~~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~~v~~~~~~   86 (397)
T TIGR01976        18 RVFFDNPAGT-----QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPPEVVFGANA   86 (397)
T ss_pred             eEEecCCccC-----CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCCH
Confidence            6899988866     5788899999888764321   23433322    3577777777763      455679999999


Q ss_pred             HHHHHHHHHHh---cCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631          119 KQAIQVILTVL---ARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       119 ~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      +++++.++.++   .++||+|++.+++|.+..    ..++..|++++.++.+++ ++.+|++++++.++++++++++++|
T Consensus        87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~  165 (397)
T TIGR01976        87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA  165 (397)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence            99999887775   579999999999997643    456778999999987642 3568999999999888999999999


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      +||||..++   +++|.++|+++|+++|+|+++..    |.....+..++.   .+++.|+||++|   .|+|++++++ 
T Consensus       166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~~~---d~~~~s~~K~~g---~~~G~l~~~~-  231 (397)
T TIGR01976       166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQATGA---DFLTCSAYKFFG---PHMGILWGRP-  231 (397)
T ss_pred             CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHcCC---CEEEEechhhcC---CceEEEEEcH-
Confidence            999999964   88899999999999999999854    322223333332   366789999963   4689999863 


Q ss_pred             CcchhHHHHHHHHhhhcc-----------cccCCchHHHHHHHHHhhccch--------------hHHHHHHHHHHHHHH
Q 014631          272 SGILQELRIVDSIKGYLN-----------ISSGPATFVQGAVPQIFKNTKE--------------DFFSKIVDILRDTAD  326 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~~~~  326 (421)
                             ++++.+.....           ..++++.....++.++++...+              .++++..++..++++
T Consensus       232 -------~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~  304 (397)
T TIGR01976       232 -------ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAE  304 (397)
T ss_pred             -------HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHH
Confidence                   45555443211           1124444444444444432111              135677788888999


Q ss_pred             HHHHHhhcCCCccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----------CCCe
Q 014631          327 ICYDRIKEIPCITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----------MKNW  391 (421)
Q Consensus       327 ~~~~~l~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----------~~~~  391 (421)
                      ++++.|++++++.+. .+    ..+.++.+.++.      .+..++..+| +++||.+..|..+.           ..++
T Consensus       305 ~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~  376 (397)
T TIGR01976       305 YLLVGLSDLPGVTLY-GVARLAARVPTVSFTVHG------LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGV  376 (397)
T ss_pred             HHHHHHhcCCCEEEe-CCCCccCCCceEEEEeCC------cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCe
Confidence            999999988667733 33    134455555542      1345666655 67899999886553           2468


Q ss_pred             EEEEec--CCHHHHHHHHHHH
Q 014631          392 LRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l  410 (421)
                      +|+|++  ++++|++++++.|
T Consensus       377 iRis~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       377 VRVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             EEEEeeccCCHHHHHHHHHhC
Confidence            999997  8899999998864

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.98  E-value=1.8e-29  Score=238.31  Aligned_cols=346  Identities=17%  Similarity=0.174  Sum_probs=247.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCc---HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTT---PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~---~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .|..++.|..+++-.+  +..+   ..+.++..+++..+. ..|.+..|+.+||++++++++        .+++++|+||
T Consensus         9 ~g~n~~~l~~~~v~iD--lltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~G   77 (431)
T cd00617           9 AGYNVFLLRSEDVYID--LLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQG   77 (431)
T ss_pred             cCCCEEeCCCCCcCCC--CCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCH
Confidence            4899999999998322  2333   355556566665554 369999999999999999984        3579999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC--------ccCCHHHHHhhhccC----ceEE
Q 014631          119 KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG--------WEVDLDGLEALADEN----TVAM  186 (421)
Q Consensus       119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~--------~~~d~e~l~~~~~~~----~~~i  186 (421)
                      ++|+.+++.++++|||.| +++|.|..+...+...|++++.++++++.+        +.+|+++|++.+.++    +++|
T Consensus        78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I  156 (431)
T cd00617          78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI  156 (431)
T ss_pred             HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence            999999999999999987 689999999999999999999999865432        449999999998765    6788


Q ss_pred             EEeCCCCCc-ccccCHHHHHHHHHHHHhcCcEEEEccccccc--cc-----CCCCcccccccCCCCCEEEEcccccccCC
Q 014631          187 VIVNPGNPC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDHL--TF-----GSTPYVRMGVFGSTVPVITLGSMSKRWIV  258 (421)
Q Consensus       187 ~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  258 (421)
                      ++++|+||+ |.+++.+++++|.++|++||++||.|+++...  .+     .|....++...     ++.++|++|.+.+
T Consensus       157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei-----~~e~~s~sd~~~m  231 (431)
T cd00617         157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEI-----AREMFSYADGCTM  231 (431)
T ss_pred             EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHH-----HHHhhccCCEEEE
Confidence            999999998 99999999999999999999999999996531  11     11111122111     2334566666656


Q ss_pred             CCce------EEEEEeeCCCcchhHHHHHHHHhhhcc-----c-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631          259 PGWR------LGWLVTSDPSGILQELRIVDSIKGYLN-----I-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD  326 (421)
Q Consensus       259 ~G~r------~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  326 (421)
                      .|++      .||+++++       +++.++++....     . .++.+.....+++..|+...+  .+...+++ ++++
T Consensus       232 S~~K~~~~~~GG~i~~~d-------~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~-~~r~  301 (431)
T cd00617         232 SAKKDGLVNIGGFLALRD-------DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRV-EQVR  301 (431)
T ss_pred             EeecCCCCccceEEEeCc-------HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHH-HHHH
Confidence            6655      56888864       346666664321     1 122333333444435543211  22223333 3558


Q ss_pred             HHHHHhhcCCCccccCCCCceeEEEEecCccc--cc-CCCChHHHHHHHHhhcCeeEEe-CCCC-C-----------CCC
Q 014631          327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LE-GISDDMEFALQLAKEESVIVLP-GMAV-G-----------MKN  390 (421)
Q Consensus       327 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~v~~-g~~~-~-----------~~~  390 (421)
                      ++.+.|.+. |+. +..|.+++++|++++...  .+ ...++.+++.+|+++.||.+.- |+.. +           .-.
T Consensus       302 ~l~~~L~~~-G~~-v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~  379 (431)
T cd00617         302 YLGDRLDEA-GVP-IVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELE  379 (431)
T ss_pred             HHHHHHHHC-CCC-ccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccc
Confidence            899999988 888 448999999999876421  00 1124788998999999999653 4421 1           025


Q ss_pred             eEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631          391 WLRITFA---IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       391 ~iRi~~~---~~~e~l~~~~~~l~~~~~~  416 (421)
                      .+|+++.   .+.+.++.+.+.|..+.++
T Consensus       380 ~~rl~~prr~~t~~~~~~~~~~~~~~~~~  408 (431)
T cd00617         380 LVRLAIPRRVYTQDHMDYVAAAVIALYER  408 (431)
T ss_pred             eeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence            7999997   6899999999999988765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.98  E-value=2.1e-30  Score=215.60  Aligned_cols=331  Identities=19%  Similarity=0.287  Sum_probs=249.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      |++++.++...-..   .|.|..+ +       -  -..|+..+ ..+++.+++.-      .+..+++|+++-|+.+.+
T Consensus        40 G~~iv~ld~~e~~r---yPdP~q~-e-------f--k~~~~d~r-nk~ls~a~~~d------kpLt~dnic~GvGsDE~I   99 (375)
T KOG0633|consen   40 GRDIVKLDANENPR---YPDPEQM-E-------F--KYVYPDPR-NKRLSDALAQD------KPLTSDNICVGVGSDELI   99 (375)
T ss_pred             CCCceEeccccCCC---CcCHHHc-c-------c--ccccCCcc-cchhhhhcccC------CCCCccceEEecCcHHHH
Confidence            77888887665332   2333331 1       1  12344443 24555555443      267899999999999999


Q ss_pred             HHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCccccc
Q 014631          123 QVILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVF  199 (421)
Q Consensus       123 ~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~  199 (421)
                      .++++..+.|| ++|+...|+|+-|.-.+...+++++.+|+++  +|.+++|++.+.+..  ..|.+++++|+||||..+
T Consensus       100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~i  177 (375)
T KOG0633|consen  100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSII  177 (375)
T ss_pred             HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccc
Confidence            99999999999 8999999999999888889999999999876  688999999987753  578899999999999999


Q ss_pred             CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      ..+++.+|.+--  .|.++++||+|.+|.  |.. ..+.-.....+++++.+|||.||++|+|+||.+.+        .+
T Consensus       178 k~~di~KiLe~p--~nglVVvDEAYidFs--g~~-S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~--------~~  244 (375)
T KOG0633|consen  178 KEDDILKILEMP--DNGLVVVDEAYIDFS--GVE-SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP--------LS  244 (375)
T ss_pred             cHHHHHHHHhCC--CCcEEEEeeeeEeec--ccc-ccchHhHhCCceeehhhhhhhcCcceeEeeccccc--------HH
Confidence            999999998843  378999999999976  411 12223344568899999999999999999999986        35


Q ss_pred             HHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      +++-+.+.+.. .+.+.....++.++++...-..++..++.+.+.++++...|.++|++.....+...+|+.+++.....
T Consensus       245 ia~iln~~KaP-YNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n  323 (375)
T KOG0633|consen  245 IAEILNRAKAP-YNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDN  323 (375)
T ss_pred             HHHHHHhccCC-ccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCc
Confidence            66766666654 36667777788888876556778888999999999999999999887644467777888888864310


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEe-CCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLP-GMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~-g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                         ..+...+.+++-+.||.|+- |+-.+..+++||+.+..+|. ..++..|+++
T Consensus       324 ---~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~~  374 (375)
T KOG0633|consen  324 ---GMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQF  374 (375)
T ss_pred             ---HHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHhh
Confidence               12456666777889999985 44444578999999965443 4556666554

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.98  E-value=1.2e-29  Score=241.08  Aligned_cols=333  Identities=14%  Similarity=0.117  Sum_probs=232.6

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS---------VGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---------~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      +|+.+..+     +.++.+.+++.+.+....  .++..         ..+.++|+.+++++      ++++++|++|+|+
T Consensus         2 yld~aa~~-----~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~   68 (379)
T TIGR03402         2 YLDNNATT-----RVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGG   68 (379)
T ss_pred             cCCCcCCC-----CCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcH
Confidence            45555543     677899999998876421  22111         12446667777776      3568899999999


Q ss_pred             HHHHHHHHHHhc---CCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631          119 KQAIQVILTVLA---RPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       119 ~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      +++++.++..+.   .+||.|++...+|+++...   +...|.+++.++.++  ++.+|++++++.++++++++++++++
T Consensus        69 t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~  146 (379)
T TIGR03402        69 TESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWAN  146 (379)
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEccc
Confidence            999999988764   4568999999898876543   334699999888753  34689999999998899999999999


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      ||||..+|   +++|.++|+++|+++++|++|+.    |....++...+.+   +++.|.+|.++.+|  +|++++++..
T Consensus       147 n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~v~~~~  214 (379)
T TIGR03402       147 NETGTIFP---IEEIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNID---MLSLSGHKLHGPKG--VGALYIRKGT  214 (379)
T ss_pred             CCeeeccc---HHHHHHHHHHcCCEEEEECcccc----cccccCcccCCCC---EEEEcHHHcCCCCc--eEEEEECCCC
Confidence            99999977   56889999999999999999986    3333344433332   67778899766566  7888886432


Q ss_pred             cchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCc---ee
Q 014631          273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEG---SM  348 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~---~~  348 (421)
                      ...  +.+...........++++.....++.++++. ...++++..++.+++++++.+.|.+ +|++.+. .+..   +.
T Consensus       215 ~~~--p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-~~~~~~~~~  290 (379)
T TIGR03402       215 RFR--PLLRGGHQERGRRAGTENVPGIVGLGKAAEL-ATEHLEEENTRVRALRDRLEAGLLARIPDARLN-GDPTKRLPN  290 (379)
T ss_pred             CCC--CcccCCccCCCcCCCCccHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEe-CCCccCCCC
Confidence            110  1110000011112356777777777777764 3356788888999999999999985 8887733 3321   11


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHHHH
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~~~  407 (421)
                      .+.+.++.      .+..++... +.++||.+.+|..|..                   .+.+|+|++  ++++||++++
T Consensus       291 ~~~~~~~~------~~~~~~~~~-l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~  363 (379)
T TIGR03402       291 TVNISFEY------IEGEAILLL-LDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVL  363 (379)
T ss_pred             EEEEEecC------CCHHHHHHh-hccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHH
Confidence            22222322      135566654 4778999999886632                   268999998  8999999999


Q ss_pred             HHHHHHHHHhh
Q 014631          408 GRIKAFCQRHA  418 (421)
Q Consensus       408 ~~l~~~~~~~~  418 (421)
                      +.|++++++++
T Consensus       364 ~~l~~~~~~~~  374 (379)
T TIGR03402       364 EVLPPIIARLR  374 (379)
T ss_pred             HHHHHHHHHHH
Confidence            99999987764

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.98  E-value=3.6e-29  Score=239.40  Aligned_cols=333  Identities=16%  Similarity=0.172  Sum_probs=232.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ++++++|+.++   |.++..+|.+++++.+++++....      .|+......+|++.++++++        .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~  112 (402)
T TIGR01821        44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFT  112 (402)
T ss_pred             CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEEC
Confidence            47789998887   677889999999999999873211      12223335788888888873        13456666


Q ss_pred             CHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---c-CceEEEEeC
Q 014631          117 GCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---E-NTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~-~~~~i~~~~  190 (421)
                      +|++++..++..+..  +++.|+.....|.+....+...|.++..++.       .|++++++.++   + ++++|++++
T Consensus       113 sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~  185 (402)
T TIGR01821       113 SGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFES  185 (402)
T ss_pred             chHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcC
Confidence            678888888887764  6777777766777776777778877665543       25666666553   2 578889999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      |+||+|.+.+   +++|.++|++||+++|+||+|+...++..+.......+. .+..++++||||.|+++|   ||++++
T Consensus       186 ~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~  259 (402)
T TIGR01821       186 VYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS  259 (402)
T ss_pred             CCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC
Confidence            9999999966   888899999999999999999854433221111111111 123577889999998888   898875


Q ss_pred             CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                              +++++.+.....   .+.+.++..+.++.++|+...+.  ...+++++++++++.+.|+++ |+. +..+. 
T Consensus       260 --------~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-  326 (402)
T TIGR01821       260 --------RKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIP-VIPNP-  326 (402)
T ss_pred             --------HHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCC-cCCCC-
Confidence                    356666654322   23456777788887887642222  445566778889999999887 776 32444 


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +.++.+.++..     ....++...+++++||.+.+...+..   ..++|++++  ++++|++++++.|+++++++
T Consensus       327 ~~i~~i~~~~~-----~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  397 (402)
T TIGR01821       327 SHIVPVIIGDA-----ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL  397 (402)
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            44555555421     02456777666677999988654432   368999997  89999999999999998764

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.98  E-value=2.7e-29  Score=238.83  Aligned_cols=338  Identities=12%  Similarity=0.107  Sum_probs=239.9

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-----CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-----DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +|+.+..+     +.++.+.+++.+.+.....     +.|+ ..+...+++++++++.. .+. .++++|++|+|+++++
T Consensus         2 yld~aa~~-----~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal   73 (382)
T TIGR03403         2 YLDNNATT-----MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESN   73 (382)
T ss_pred             cccCcCCC-----CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHH
Confidence            46666544     5678899999988865211     1222 23457888888888753 331 2678999999999999


Q ss_pred             HHHHHHhc-----CC-CCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC
Q 014631          123 QVILTVLA-----RP-GANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN  193 (421)
Q Consensus       123 ~~~~~~l~-----~~-gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n  193 (421)
                      +.+++++.     ++ +++|+++...|+++...   ++..|.+++.+++++  ++.+|++++++.++++++++++++|+|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n  151 (382)
T TIGR03403        74 NWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANN  151 (382)
T ss_pred             HHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccC
Confidence            99998752     45 47899998888766444   456799999998753  346899999999988899999999999


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCc
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG  273 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  273 (421)
                      |||..++   +++|.++|+++|+++++|+++..    |.....+...+.+   +++.|++|++|.+|  +|++++++...
T Consensus       152 ~tG~~~~---~~~I~~la~~~g~~~ivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~vr~~~~  219 (382)
T TIGR03403       152 ETGMIFP---IKEIGEICKERGVLFHTDAVQAI----GKIPVDVQKAGVD---FLSFSAHKFHGPKG--VGGLYIRKGVE  219 (382)
T ss_pred             CCccccC---HHHHHHHHHHcCCEEEEechhhc----CCCccCccccCCC---EEEEcchhhCCCCc--eEEEEECCCCC
Confidence            9999977   66888899999999999999875    2222233332222   77889999987777  68888764321


Q ss_pred             chhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc---eeEE
Q 014631          274 ILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG---SMFV  350 (421)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---~~~~  350 (421)
                      ..  +.+...........++++.+.+.++.++++. ..+.++...++++++++++.+.|++++++.+. .+..   +.++
T Consensus       220 ~~--p~~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~  295 (382)
T TIGR03403       220 LT--PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL-ANEYLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTI  295 (382)
T ss_pred             CC--CcccCCCCCCCcccCCcChHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCCEE
Confidence            11  1110000001112357888888888888864 33457777889999999999999998888843 4321   2354


Q ss_pred             EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------------C-----CCeEEEEec--CCHHHHHHHHHH
Q 014631          351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------------M-----KNWLRITFA--IEPSALEEGLGR  409 (421)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------~-----~~~iRi~~~--~~~e~l~~~~~~  409 (421)
                      .+.++.      .+..++... |.++||.++.|..|.              .     .+.+|+|++  ++++|++++++.
T Consensus       296 ~~~~~~------~~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~  368 (382)
T TIGR03403       296 LISIKG------VEGEAMLWD-LNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEV  368 (382)
T ss_pred             EEEeCC------CCHHHHHHh-hccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHH
Confidence            555542      135566665 477899999876552              1     257999998  899999999999


Q ss_pred             HHHHHHHhh
Q 014631          410 IKAFCQRHA  418 (421)
Q Consensus       410 l~~~~~~~~  418 (421)
                      |++++++++
T Consensus       369 l~~~~~~~~  377 (382)
T TIGR03403       369 FKKAVQRLR  377 (382)
T ss_pred             HHHHHHHHH
Confidence            999988765

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK02948 cysteine desulfurase; Provisional

Probab=99.98  E-value=8.8e-30  Score=242.22  Aligned_cols=335  Identities=12%  Similarity=0.092  Sum_probs=235.0

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP--------SVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ++|+.+..+     +.++.+.+++.+.+.... .++..        ..-+.++|+.+++++      +.++++|++++|+
T Consensus         2 ~yld~a~~~-----~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~   69 (381)
T PRK02948          2 IYLDYAATT-----PMSKEALQTYQKAASQYF-GNESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGG   69 (381)
T ss_pred             EeccCCCCC-----CCCHHHHHHHHHHHHhcC-CCCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcH
Confidence            577777654     577889999988876421 11111        112457777788777      3568899999999


Q ss_pred             HHHHHHHHHHhc----CCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631          119 KQAIQVILTVLA----RPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       119 ~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      ++++..++.++.    ++||.|+++..+|+++..   .++..|.+++.+++++  ++.+|++++++.++++++++++++|
T Consensus        70 t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~  147 (381)
T PRK02948         70 TESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHA  147 (381)
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECC
Confidence            999999888775    578999999988876544   4566799999888753  3568999999998888899999999


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      +||||.++|   +++|.++|+++|+++++|+++..    |.....+..+   +..+++.|+||.+|.+|  +|++++++.
T Consensus       148 ~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~----g~~~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~~~~~  215 (381)
T PRK02948        148 NSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTF----GKLPIDVFEM---GIDSLSVSAHKIYGPKG--VGAVYINPQ  215 (381)
T ss_pred             cCCcEeehh---HHHHHHHHHHcCCEEEEEChhhc----cccccCcccC---CCCEEEecHHhcCCCCc--EEEEEEcCC
Confidence            999999965   77888999999999999988765    2222222232   23477889999988788  799888642


Q ss_pred             CcchhHHHHHH-HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee--
Q 014631          272 SGILQELRIVD-SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM--  348 (421)
Q Consensus       272 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~--  348 (421)
                      ....   .+.. .........++++.+++.++.++++.. .++.++.+++++++++++.+.|+++ ++.+.......+  
T Consensus       216 ~~~~---~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~  290 (381)
T PRK02948        216 VRWK---PVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCL  290 (381)
T ss_pred             CCCC---CcccCCCCCCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCc
Confidence            1100   0000 000111123578888888888888752 2467888899999999999999987 554221111111  


Q ss_pred             --EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHH
Q 014631          349 --FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEE  405 (421)
Q Consensus       349 --~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~  405 (421)
                        .+.+.++.     . +..++...| .++||.+.+|..+..                   .+++|+|++  ++++|+++
T Consensus       291 ~~i~~~~~~~-----~-~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~  363 (381)
T PRK02948        291 PHIIGVTIKG-----I-EGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDT  363 (381)
T ss_pred             CCEEEEEeCC-----C-CHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHH
Confidence              11112221     1 345566554 678999998875311                   368999998  79999999


Q ss_pred             HHHHHHHHHHHhhh
Q 014631          406 GLGRIKAFCQRHAK  419 (421)
Q Consensus       406 ~~~~l~~~~~~~~~  419 (421)
                      +++.|+++++++.+
T Consensus       364 l~~~l~~~~~~~~~  377 (381)
T PRK02948        364 TIHALETIGNQFYR  377 (381)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999877643

>PRK07179 hypothetical protein; Provisional

Probab=99.98  E-value=6.9e-29  Score=237.73  Aligned_cols=332  Identities=15%  Similarity=0.129  Sum_probs=231.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-----FDCY-SPSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----~~~y-~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .|..+++|+..+   +.++..+|.+++++.+++++..     ...+ .......+|++.++++++        .+.++++
T Consensus        52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~  120 (407)
T PRK07179         52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--------FESCLLC  120 (407)
T ss_pred             CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--------CCcEEEE
Confidence            466788888776   6667889999999999987521     1111 111235788888888873        2467889


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCC
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNP  194 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~np  194 (421)
                      +||++|+..+++++..+||.|+++.+.|.+....+...|.++..++.       .|++++++.+++ ++++|++.+++||
T Consensus       121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~  193 (407)
T PRK07179        121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST  193 (407)
T ss_pred             CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence            99999999999999999999999999999888888888887765542       488999998865 4677888889999


Q ss_pred             cccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEcccccccCCCCceEEEEEeeCCCc
Q 014631          195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTSDPSG  273 (421)
Q Consensus       195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~  273 (421)
                      ||.+.|   +++|.++|+++|+++|+||+|+....+..+...+..++.... .+++.|+||+++   .|+|+++++    
T Consensus       194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~----  263 (407)
T PRK07179        194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCP----  263 (407)
T ss_pred             CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeC----
Confidence            999977   778899999999999999999864433222111223332222 377889999975   368999985    


Q ss_pred             chhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEE
Q 014631          274 ILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV  350 (421)
Q Consensus       274 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~  350 (421)
                          +++++.+.....   ..++.++....++.++++..  ....+.+++++++++++.+.|+++ |+. +. + .+.++
T Consensus       264 ----~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~-~-~~~i~  333 (407)
T PRK07179        264 ----RELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYN-IR-S-ESQII  333 (407)
T ss_pred             ----HHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CC-C-CCCEE
Confidence                245555543321   12233444444444555431  223456788999999999999987 777 42 2 35677


Q ss_pred             EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ++.++..      .....+...+.++||.+..-....   ..+.+||+++  +++++++++++.|++++++.
T Consensus       334 ~l~~~~~------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        334 ALETGSE------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             EEEeCCH------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence            7766421      123344445577899743211111   2468999998  79999999999999988764

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.97  E-value=2.7e-29  Score=239.01  Aligned_cols=333  Identities=13%  Similarity=0.149  Sum_probs=230.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .|.++|||..|.+..+.+ +.++.+.+++.+++.+...  ..| +.....++++.+++++    |    .+++++++||+
T Consensus        25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~~~~~~sg~   94 (379)
T TIGR00707        25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS----G----ADRVFFCNSGA   94 (379)
T ss_pred             CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence            478999999986554444 4678999999998876321  123 2222445555565554    3    24999999999


Q ss_pred             HHHHHHHHHhc---C----CCCeEEEcCCCCcchHHHHhhcCceeEe----eeccCCCCccC--CHHHHHhhhccCceEE
Q 014631          120 QAIQVILTVLA---R----PGANILLPKPGFPLYEANARHTRLEIRH----FDLLPEKGWEV--DLDGLEALADENTVAM  186 (421)
Q Consensus       120 ~al~~~~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~~~--d~e~l~~~~~~~~~~i  186 (421)
                      +++..+++.+.   .    +||+|++++|+|+++...+...+.....    .++..+..+..  |++++++.+.++++++
T Consensus        95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v  174 (379)
T TIGR00707        95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV  174 (379)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence            99999988652   2    3799999999999887666655543321    22211111111  7899999888778888


Q ss_pred             EEeCCCCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          187 VIVNPGNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       187 ~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      ++..++|++|.. ++.+++++|.++|+++|+++|+||+|.++.+.|.. .+....+...+++   +|||.++ +|+|+||
T Consensus       175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~  249 (379)
T TIGR00707       175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGA  249 (379)
T ss_pred             EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEE
Confidence            776556777864 78999999999999999999999999987665532 2222222222333   7899987 9999999


Q ss_pred             EEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC---CCcccc
Q 014631          266 LVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI---PCITCP  341 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~~~~  341 (421)
                      ++++        +++++.+.... ....+.+++.+.++.++|+....   .+..++++++++.+++.|+++   .++. .
T Consensus       250 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~  317 (379)
T TIGR00707       250 TLAK--------EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNYPNK-E  317 (379)
T ss_pred             EEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCC-c
Confidence            9985        35777776542 22346788999999888864221   235566777777777777654   1221 1


Q ss_pred             CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                       .+..|.++|+.++.       +..++... +.++||.+.|+.    .+++|++++  .+++++++++++|++++
T Consensus       318 -~~~~g~~~~~~~~~-------~~~~~~~~-l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~  379 (379)
T TIGR00707       318 -VRGKGLMLGIELEA-------PCKDIVKK-ALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI  379 (379)
T ss_pred             -cccCceEEEEEecC-------cHHHHHHH-HHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence             22357788888763       24556555 577899999853    478999985  78999999999998763

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.97  E-value=2.8e-29  Score=239.94  Aligned_cols=336  Identities=14%  Similarity=0.134  Sum_probs=234.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..|++++||..|.+....+ +.+|.+.+++.+++++..  ...|....+ .++.+.+++++    + ...++++++++|+
T Consensus        40 ~dg~~~lD~~s~~~~~~lG-~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~-~~~~~~v~~~~sg  112 (398)
T PRK03244         40 VDGKEYLDLLGGIAVNALG-HAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----G-APEGGRVFFCNSG  112 (398)
T ss_pred             CCCCEEEECCcCHhhccCC-CCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----C-CCCCCEEEEeCch
Confidence            3488999999886554333 357999999999998632  224543322 45555555554    3 1235799999999


Q ss_pred             HHHHHHHHHHhcCCC-CeEEEcCCCCcchHHHHhhc-Cce------------eEeeeccCCCCccCCHHHHHhhhccCce
Q 014631          119 KQAIQVILTVLARPG-ANILLPKPGFPLYEANARHT-RLE------------IRHFDLLPEKGWEVDLDGLEALADENTV  184 (421)
Q Consensus       119 ~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~d~e~l~~~~~~~~~  184 (421)
                      ++++..+++.+..+| +.|+..+++|+++...+... |..            +..+|.       .|++++++.+.++++
T Consensus       113 sea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~  185 (398)
T PRK03244        113 AEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTA  185 (398)
T ss_pred             HHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeE
Confidence            999999999776666 57777888999875444322 211            111111       278899988877788


Q ss_pred             EEEEeCCCCCcccccCHHH-HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631          185 AMVIVNPGNPCGNVFTYQQ-LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL  263 (421)
Q Consensus       185 ~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  263 (421)
                      ++++..++||+|.++++++ +++|.++|++||+++|+||+|+++.+.|..+ .+...+...++   .+|||+++ +|+|+
T Consensus       186 aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~i  260 (398)
T PRK03244        186 AVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPI  260 (398)
T ss_pred             EEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCccc
Confidence            8888888999999987655 9999999999999999999999887766532 22222222223   37899986 89999


Q ss_pred             EEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-
Q 014631          264 GWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP-  341 (421)
Q Consensus       264 G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-  341 (421)
                      |+++++        +++++.+.... ..+.+.+++.+.++.++|+...+   ++..++++++.+++.+.|+++ +...+ 
T Consensus       261 g~~~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~  328 (398)
T PRK03244        261 GACLAF--------GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVD  328 (398)
T ss_pred             EEEEEc--------HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCcee
Confidence            999996        35666665432 23457888999999998864221   234566777788888888875 22111 


Q ss_pred             CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      .....|+++|++++..      ....+...+ .++||.+.+..    .+.+|++++  .+++++++++++|++++++..
T Consensus       329 ~v~g~g~~~~i~~~~~------~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~  396 (398)
T PRK03244        329 HVRGRGLLLGIVLTAP------VAKAVEAAA-REAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA  396 (398)
T ss_pred             eEeeccEEEEEEEecc------HHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence            1123678999988631      244555554 66899998742    478999987  789999999999999998754

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.97  E-value=6.6e-29  Score=238.13  Aligned_cols=332  Identities=17%  Similarity=0.173  Sum_probs=230.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ++++++|+..+   +.++..+|.+.+++.+++++...      ..|++...+.+|++.++++++       .++.+++ +
T Consensus        45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~~~~~~-~  113 (407)
T PRK09064         45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KEAALVF-T  113 (407)
T ss_pred             CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CCcEEEE-C
Confidence            47789998887   66778899999999998876322      123344446788888888872       2444444 4


Q ss_pred             CHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeC
Q 014631          117 GCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~  190 (421)
                      +|++++..++..+..  +++.|+.....|.+....+...+.++..++.       .|++++++.++    +++++|++++
T Consensus       114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~  186 (407)
T PRK09064        114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES  186 (407)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence            556677777776654  7777777777777776777777877665543       26677777664    4678899999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      |+||+|.+.+   +++|.++|++||+++|+||+|+...++  |........+. .+..++++||||.||++|   ||+++
T Consensus       187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~G---G~~~~  259 (407)
T PRK09064        187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMG---GYIAG  259 (407)
T ss_pred             CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhhccC---ceEec
Confidence            9999999965   888899999999999999999843332  32221111111 233588899999998887   99887


Q ss_pred             eCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631          269 SDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE  345 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~  345 (421)
                      +        +++++.+.....   .+.+.++..+.++.++++....  ....+++++++++++.+.|+++ |+. +..+.
T Consensus       260 ~--------~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~  327 (407)
T PRK09064        260 S--------AALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAA-GIP-VMPNE  327 (407)
T ss_pred             C--------HHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCC
Confidence            5        356666554322   2335566677777777754221  1334678889999999999986 777 32333


Q ss_pred             ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                       +.++++.++..     ....++...+++++||.+.+...+..   .+++|++++  ++++|++++++.|+++++++
T Consensus       328 -~~iv~i~~~~~-----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~  398 (407)
T PRK09064        328 -SHIVPVMVGDP-----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL  398 (407)
T ss_pred             -CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence             55666666421     12456777776677999988654433   267999998  79999999999999998765

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.97  E-value=1e-28  Score=233.25  Aligned_cols=322  Identities=14%  Similarity=0.142  Sum_probs=220.3

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC-------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSP-------SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG  133 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~-------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g  133 (421)
                      ...+.+.+++.+.-.......+..       ..-+..+++.+|++++      .  +.+.+++|+++++..++.++.++|
T Consensus        19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g------~--~~~~i~~g~~~a~~~~~~~l~~~g   90 (370)
T TIGR02539        19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG------M--DEARVTHGAREGKFAVMHALCKEG   90 (370)
T ss_pred             CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC------C--CceEEECChHHHHHHHHHHhhCCC
Confidence            566777777777644221111110       1124677888888873      2  356778999999999999999999


Q ss_pred             CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------CceEEEEeCCCCCcccccCHHHHHH
Q 014631          134 ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-------NTVAMVIVNPGNPCGNVFTYQQLQK  206 (421)
Q Consensus       134 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~~  206 (421)
                      |.|+++.+.|.+....++..|++++.++++.++++.+|++++++.+++       ++++|++++|+||||..   .++++
T Consensus        91 d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~---~~l~~  167 (370)
T TIGR02539        91 DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNL---PDAGK  167 (370)
T ss_pred             CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccc---cCHHH
Confidence            999999999877777888999999999976555678999999998753       57789999999999998   45888


Q ss_pred             HHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh
Q 014631          207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG  286 (421)
Q Consensus       207 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  286 (421)
                      |.++|+++|+++|+|++|+.+..    .......+   ..++++|+||+++ +|.|+||++++        +++++.+..
T Consensus       168 i~~la~~~~~~livDea~~~g~~----~~~~~~~~---~di~v~s~sK~~~-~~g~~G~l~~~--------~~~i~~l~~  231 (370)
T TIGR02539       168 VAKVCREKGVPLLLNCAYTVGRM----PVSAKEIG---ADFIVGSGHKSMA-ASGPCGVLGMS--------EEWEDIVLR  231 (370)
T ss_pred             HHHHHHHcCCeEEEECccccCCc----CCCHHHcC---CCEEEeeCccccc-CCCCEEEEEEC--------HHHHhhhcc
Confidence            88999999999999999987321    11111222   2367799999987 56689999986        356666655


Q ss_pred             hcccc---------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCceeEEEEecCc
Q 014631          287 YLNIS---------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP-RKPEGSMFVMVKLNL  356 (421)
Q Consensus       287 ~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~~~~~~~~  356 (421)
                      ....+         .+.....+.++..++.. ..++++...+.++. ++++.+.|+++ |+.++ ..|..++|++++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~  308 (370)
T TIGR02539       232 KSRYSPVKEVELLGCTSRGAPIVTMMASFPH-VVERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPG  308 (370)
T ss_pred             cccCCccceeeeecccccccHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCc
Confidence            43211         11222244444444532 12344444444444 45899999987 77632 246678888887753


Q ss_pred             cc---ccCCCChHHHHHHHHhhcCee-EEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631          357 SL---LEGISDDMEFALQLAKEESVI-VLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       357 ~~---~~~~~~~~~~~~~ll~~~gv~-v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ..   .........+.. .|.++||. +++|    ..+++|+++. .++++++++++.|+++++++
T Consensus       309 ~~~~~~~~~~~~~~~~~-~L~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~  369 (370)
T TIGR02539       309 FHEIAQKHKRRGYFLYE-ELKKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY  369 (370)
T ss_pred             hhHHhhhhccccHHHHH-HHHhCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence            10   000112233444 55677997 5543    3568999964 79999999999999988754

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.97  E-value=6.9e-29  Score=237.91  Aligned_cols=339  Identities=16%  Similarity=0.105  Sum_probs=234.5

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA------EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      .+.++|.-|.      -+.++.+.+++.+.+...      ....|....+.+++++.+++++++.+|.  +...|+++ |
T Consensus        19 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~-s   89 (402)
T cd00378          19 RETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH-S   89 (402)
T ss_pred             HhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-C
Confidence            4578886554      245789999998765321      1223555566678888777777766663  34455555 5


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-----HhhcCceeEeeeccCCC-CccCCHHHHHhhhc-cCceEEEEeC
Q 014631          118 CKQAIQVILTVLARPGANILLPKPGFPLYEAN-----ARHTRLEIRHFDLLPEK-GWEVDLDGLEALAD-ENTVAMVIVN  190 (421)
Q Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~-~~~~~i~~~~  190 (421)
                      |++++..++.+++++||+|++++|+|.++...     +...|.++..+++..+. ++.+|++++++.+. ++++++++++
T Consensus        90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~  169 (402)
T cd00378          90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA  169 (402)
T ss_pred             cHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence            67999999999999999999999999876433     55678777777765442 57899999999884 5788888888


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc-cccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      |+||+  .   .++++|+++|+++|+++|+|++| .++.+.|....++.  ..  + ++++|+||+|  +|+|.||++++
T Consensus       170 ~~~~~--~---~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~--d-v~~~s~sK~l--~G~~gg~i~~~  237 (402)
T cd00378         170 SAYPR--P---IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA--D-VVTTTTHKTL--RGPRGGLILTR  237 (402)
T ss_pred             cccCC--C---cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC--c-EEEeccccCC--CCCCceEEEec
Confidence            88764  3   35889999999999999999996 44444343222222  11  2 6789999985  78899999986


Q ss_pred             CCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631          270 DPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS  347 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~  347 (421)
                      +       +++.+.+.....  ..+++......++..++......+.++.+++++++++++.+.|++. |+.+...|.++
T Consensus       238 ~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  309 (402)
T cd00378         238 K-------GELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDN  309 (402)
T ss_pred             c-------HHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCC
Confidence            3       246666654432  1223333334343444432222356777888999999999999987 87743346778


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC------CCCeEEEEec-C-----CHHHHHHHHHHHHHHHH
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG------MKNWLRITFA-I-----EPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~------~~~~iRi~~~-~-----~~e~l~~~~~~l~~~~~  415 (421)
                      +++|+.++...    .+.. .+.++++++||.+.++..+.      ...++|++++ .     +.++++.+++.|.++++
T Consensus       310 ~~v~v~~~~~~----~~~~-~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~  384 (402)
T cd00378         310 HLVLVDLRPKG----ITGK-AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK  384 (402)
T ss_pred             eEEEEeCCccC----CCHH-HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence            99999987421    1233 44556788999998643221      2468999986 2     58999999999999875


Q ss_pred             H
Q 014631          416 R  416 (421)
Q Consensus       416 ~  416 (421)
                      +
T Consensus       385 ~  385 (402)
T cd00378         385 D  385 (402)
T ss_pred             c
Confidence            4

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.97  E-value=1.2e-28  Score=234.80  Aligned_cols=325  Identities=13%  Similarity=0.091  Sum_probs=241.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK  140 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~  140 (421)
                      ..++.+.+++.+...     .+. ..+..++.+.+.+.+.+.+|.+ ..+.++++++++++++.++..+.++||+|++.+
T Consensus        19 ~~~~~V~~a~~~~~~-----~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~   91 (401)
T PLN02409         19 NIPERVLRAMNRPNE-----DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR   91 (401)
T ss_pred             CCCHHHHHHhcCCCC-----CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence            467888887754331     121 3345778888888887777743 234678889999999999998999999999999


Q ss_pred             CCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          141 PGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       141 p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      ++|.+.  ...++..|.+++.++.+++  ..+|++++++.+++    +++++++++++||||..+|.+++.++++ |+++
T Consensus        92 ~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~  168 (401)
T PLN02409         92 IGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH  168 (401)
T ss_pred             CCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc
Confidence            999765  4677888999999987543  34799999998875    6899999999999999988666666666 9999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc------
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL------  288 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------  288 (421)
                      |+++|+|++++.    |.....+..++.   .+++.|.+|++++|. ++||+++++        ++.+++....      
T Consensus       169 g~~~vvD~v~s~----g~~~id~~~~~~---D~~~~s~~K~l~~P~-G~G~l~~~~--------~~~~~~~~~~~~~~~~  232 (401)
T PLN02409        169 PALLLVDGVSSI----GALDFRMDEWGV---DVALTGSQKALSLPT-GLGIVCASP--------KALEASKTAKSPRVFF  232 (401)
T ss_pred             CcEEEEEccccc----CCccccccccCc---cEEEEcCccccCcCC-CcceeEECH--------HHHHHHhcCCCCCeec
Confidence            999999999985    322223333332   267778899986543 699999863        3444433210      


Q ss_pred             ------------cc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC-c---eeEEE
Q 014631          289 ------------NI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE-G---SMFVM  351 (421)
Q Consensus       289 ------------~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~-~---~~~~~  351 (421)
                                  .. ..+++...+.++.++++...+.+++++.++++++++++.+.|+++ |+.++ .+. .   +...+
T Consensus       233 ~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~-~~~~~~~s~~v~~  310 (401)
T PLN02409        233 DWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLC-TKKPEWRSDTVTA  310 (401)
T ss_pred             CHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhcccceEE
Confidence                        01 236777788888888876556788999999999999999999887 77744 332 1   12345


Q ss_pred             EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +.++..     .+..++...+++++||.+.+|.....++.+||+..  ++.+++..++++|++++.++.
T Consensus       311 ~~~p~~-----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g  374 (401)
T PLN02409        311 VVVPEG-----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG  374 (401)
T ss_pred             EeCCCC-----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            555532     24567777888899999999876545789999987  789999999999999998764

>PLN02721 threonine aldolase

Probab=99.97  E-value=6.1e-29  Score=234.41  Aligned_cols=330  Identities=14%  Similarity=0.137  Sum_probs=218.6

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      .++++|+.+.+.     .+++.+.+++.+.........|.+.  ..++|++++++++.        +.++++++|++++.
T Consensus         5 ~~~~~~~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~--~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~   69 (353)
T PLN02721          5 SRVVDLRSDTVT-----KPTDAMRAAMANAEVDDDVLGYDPT--ALRLEEEMAKIFGK--------EAALFVPSGTMGNL   69 (353)
T ss_pred             hhhhhhhccccc-----CCCHHHHHHHHhccCCCcccCCCHH--HHHHHHHHHHHhCC--------ceeEEecCccHHHH
Confidence            457889999866     2467788888654111122233333  68999999999842        23566666676766


Q ss_pred             HHHHHhcC-CCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhc-------cCceEEEEeCC-
Q 014631          124 VILTVLAR-PGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-------ENTVAMVIVNP-  191 (421)
Q Consensus       124 ~~~~~l~~-~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-------~~~~~i~~~~p-  191 (421)
                      .++..+++ +||+|++++|+|.+...   .+...|++++.++.+  .++.+|+|++++.++       +++++++++++ 
T Consensus        70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~  147 (353)
T PLN02721         70 ISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTH  147 (353)
T ss_pred             HHHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccc
Confidence            77777776 99999999999875554   567789999888764  345689999999887       57888888775 


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      +||||..++.+++++|.++|+++|+++|+|++|........+. ......... ..++.|+||+|+.   ++|+++..+ 
T Consensus       148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~~~-d~~~~s~sK~l~~---~~G~~~~~~-  221 (353)
T PLN02721        148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVKAA-DSVSVCLSKGLGA---PVGSVIVGS-  221 (353)
T ss_pred             cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhhhC-CEEEEecccccCC---ceeeEEecC-
Confidence            7899999999999999999999999999999986422110011 111111111 1345579999764   357644322 


Q ss_pred             CcchhHHHHHHHHhhhcccc-cCCchHHHHHH--HHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccc-cCCCCce
Q 014631          272 SGILQELRIVDSIKGYLNIS-SGPATFVQGAV--PQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC-PRKPEGS  347 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-~~~~~~~  347 (421)
                            +++++.+....... .+++.....++  ...++    ...+.. ++..++++.+.+.|++++++.+ +..|. +
T Consensus       222 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~  289 (353)
T PLN02721        222 ------KSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQ----ENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVE-T  289 (353)
T ss_pred             ------HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHH----HHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCcc-c
Confidence                  34556554443321 12222222222  22232    223332 3345677889999998877753 33343 5


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                      +++|++++...   ..+...++.+| .++||.+.|+.    ..++|++++  .+++++++++++|++++..
T Consensus       290 ~~~~~~~~~~~---~~~~~~~~~~L-~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~  352 (353)
T PLN02721        290 NIVYFDITDGS---RITAEKLCKSL-EEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT  352 (353)
T ss_pred             eEEEEEccCCc---cccHHHHHHHH-HhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence            67888886410   01356677766 57899999974    468999997  7899999999999988753

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.97  E-value=1.5e-28  Score=231.42  Aligned_cols=327  Identities=16%  Similarity=0.154  Sum_probs=223.3

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYS----PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~----~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ++++|+..+   +.+.+.+|.+.+++++.+++...  ..|.    ......++++.+++++    +  . + +.++++++
T Consensus         2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~-~-~~iv~~sg   70 (349)
T cd06454           2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K-E-AALVFSSG   70 (349)
T ss_pred             CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C-C-CEEEeccH
Confidence            467777665   45566689999999999986321  1121    2222356666666665    3  2 2 34555666


Q ss_pred             HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----CceEEEEeCCCC
Q 014631          119 KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NTVAMVIVNPGN  193 (421)
Q Consensus       119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-----~~~~i~~~~p~n  193 (421)
                      ++++..++.+++++||.|++++|.|.++...+...|++++.++.       +|.+++++.+++     +++++++++++|
T Consensus        71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~  143 (349)
T cd06454          71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS  143 (349)
T ss_pred             HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence            78888888888899999999999999988888889998877652       467778777653     456677788999


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC-cccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP-YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      |||...   ++++|.++|+++|+++|+|++|+...+.... ..........+..++++|+||.|+.+|   ||++.+   
T Consensus       144 ~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~---  214 (349)
T cd06454         144 MDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS---  214 (349)
T ss_pred             CCCCcc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---
Confidence            999984   5889999999999999999999753332111 111111123345688999999987755   888874   


Q ss_pred             cchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631          273 GILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF  349 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~  349 (421)
                           +++.+.+.....   ..++.++..+.++.+.++...+  .+..+++++++++.+.+.|.++ ++.+. .+.++.+
T Consensus       215 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~  285 (349)
T cd06454         215 -----KELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVG-GSPSHII  285 (349)
T ss_pred             -----HHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCcE
Confidence                 245555544322   1234566666677777754222  4567788999999999999887 77633 3434444


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      .++.++..     .+..++...|++ +||.+.++....   ..+++|++++  ++++++++++++|+++
T Consensus       286 ~~~~~~~~-----~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         286 PPLIGDDP-----AKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             EEEeCCCh-----HHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            44434311     135667776654 599998864321   1468999998  6999999999999864

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.97  E-value=4.2e-29  Score=234.08  Aligned_cols=313  Identities=14%  Similarity=0.128  Sum_probs=218.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEc
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP  139 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~  139 (421)
                      +++++.+++++.+.....  ..|++.....++++.++++++        ++++++++||++++..++.++.++||+|+++
T Consensus         8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~g--------~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~   77 (338)
T cd06502           8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELFG--------KEAALFVPSGTAANQLALAAHTQPGGSVICH   77 (338)
T ss_pred             CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHhC--------CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence            367889999998865432  357666667888988888872        5678888888999999999999999999999


Q ss_pred             CCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------CceEEEEeCCCCCcccccCHHHHHHHHH
Q 014631          140 KPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-------NTVAMVIVNPGNPCGNVFTYQQLQKIAE  209 (421)
Q Consensus       140 ~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~~i~~  209 (421)
                      +|+|.++..   .+...|++++.++.+  . +.+|++++++++.+       +++++++++|+|| |..++.+++++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~  153 (338)
T cd06502          78 ETAHIYTDEAGAPEFLSGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA  153 (338)
T ss_pred             cCcceeeecCCcHHHHcCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence            999976542   345579998888753  2 56899999998864       6788999999997 66679999999999


Q ss_pred             HHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc
Q 014631          210 KARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN  289 (421)
Q Consensus       210 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  289 (421)
                      +|+++|+++|+|++|..+.....+. .+.......+ +++.|+||+|+++|   |++++.+       +++++.+.....
T Consensus       154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~~~  221 (338)
T cd06502         154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRRRK  221 (338)
T ss_pred             HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHHHH
Confidence            9999999999999986432111111 2222222222 45779999998887   5544322       356666655432


Q ss_pred             c---ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChH
Q 014631          290 I---SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDM  366 (421)
Q Consensus       290 ~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (421)
                      .   ....+.+.+.++...|+.   ....+..+++.++++++.+.|+++ ++. +..+ .+.++.+.++...    ....
T Consensus       222 ~~~~~~~~~~~~~~a~~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~-~~~~~~v~~~~~~----~~~~  291 (338)
T cd06502         222 QAGGGMRQSGFLAAAGLAALEN---DLWLRRLRHDHEMARRLAEALEEL-GGL-ESEV-QTNIVLLDPVEAN----AVFV  291 (338)
T ss_pred             HhCCChhhHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHhc-CCC-cccc-cCCeEEEecCCcc----HHHH
Confidence            1   223455666777677753   223455577778889999999987 555 4233 4556666554210    0112


Q ss_pred             HHHHHHH--hhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          367 EFALQLA--KEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       367 ~~~~~ll--~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      .+...+.  .++|+.+.+..    .+++|++++  +++++++++++++++
T Consensus       292 ~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         292 ELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             HHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            2222222  15799987753    278999998  689999999998865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=8.7e-29  Score=234.99  Aligned_cols=315  Identities=18%  Similarity=0.210  Sum_probs=224.2

Q ss_pred             CCcHHHHHHHHHHHhcCCCC-CCCC-------CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHhcC
Q 014631           61 RTTPVAADAVVDAVRSAEFD-CYSP-------SVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAIQVILTVLAR  131 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~-~y~~-------~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~  131 (421)
                      ++++.+.+++.+.+...... ..+.       ...+.++++.++++++      .+ ++++++|+|++++++.++.++..
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~~   83 (373)
T cd06453          10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLGR   83 (373)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence            56788999998877542110 0001       1224578888888873      44 67899999999999999999876


Q ss_pred             ---CCCeEEEcCCCCcch----HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHH
Q 014631          132 ---PGANILLPKPGFPLY----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL  204 (421)
Q Consensus       132 ---~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l  204 (421)
                         +||+|++++++|.+.    ...++..|++++.++.+  .++.+|++++++.+.++++++++++|+||||...+   +
T Consensus        84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~  158 (373)
T cd06453          84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V  158 (373)
T ss_pred             cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence               899999999999874    33455779999999875  34568999999999888999999999999999966   6


Q ss_pred             HHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHH
Q 014631          205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI  284 (421)
Q Consensus       205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~  284 (421)
                      ++|.++|+++|+++++|++|+...    ...++...+.   .+++.|++|+++.  .++|++++++        ++.+.+
T Consensus       159 ~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~~---d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~~  221 (373)
T cd06453         159 KEIGEIAHEAGVPVLVDGAQSAGH----MPVDVQDLGC---DFLAFSGHKMLGP--TGIGVLYGKE--------ELLEEM  221 (373)
T ss_pred             HHHHHHHHHcCCEEEEEhhhhcCc----eeeeccccCC---CEEEeccccccCC--CCcEEEEEch--------HHhhcC
Confidence            788899999999999999987532    1122222222   2666789999765  4589998853        344443


Q ss_pred             hhhcc----------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          285 KGYLN----------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       285 ~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                      .....                      ..++++.....++..+++...+..++++.++.+++++++.+.|++++++.++.
T Consensus       222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  301 (373)
T cd06453         222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG  301 (373)
T ss_pred             CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence            32210                      01245555566666666543345567788888899999999999988877432


Q ss_pred             CC-CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------CCCCeEEEEec--CCHHHHHHHHHHH
Q 014631          343 KP-EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------GMKNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       343 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      .+ ..+.++++.++.      .+..++...+ .++||.+.+|..+        +.++++|+|++  ++++|++++++.|
T Consensus       302 ~~~~~~~~~~~~~~~------~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         302 DAEDRAGVVSFNLEG------IHPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             CccccCCeEEEEECC------cCHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence            21 124456666542      1355666655 6689999887653        23578999998  7999999998864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK10534 L-threonine aldolase; Provisional

Probab=99.97  E-value=2.7e-29  Score=234.54  Aligned_cols=314  Identities=16%  Similarity=0.151  Sum_probs=216.4

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHH
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVIL  126 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~  126 (421)
                      |+|+++.-     ..++|.+++++.+....  ...|++.....+|+++++++++      .  +.+++++|+++++...+
T Consensus         2 ~~~~~~~~-----~~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~g------~--~~~~v~~~g~~a~~~~l   66 (333)
T PRK10534          2 IDLRSDTV-----TRPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSG------K--EAALFLPTGTQANLVAL   66 (333)
T ss_pred             cccccccC-----CCCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHhC------C--CeEEEeCchHHHHHHHH
Confidence            56766652     23678888998775443  3478777778999999999973      3  34467777888888878


Q ss_pred             HHhcCCCCeEEEcCCCCcc-hHHH-HhhcC-ceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCccc
Q 014631          127 TVLARPGANILLPKPGFPL-YEAN-ARHTR-LEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGN  197 (421)
Q Consensus       127 ~~l~~~gd~Vl~~~p~y~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~  197 (421)
                      .+++++||+|+++.|.|.. +... +...+ .+++.++++  .++.+|++++++++.+      +++++++++|+  ||.
T Consensus        67 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~  142 (333)
T PRK10534         67 LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK  142 (333)
T ss_pred             HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence            7888999999999888853 3221 23333 566666653  4578999999998865      57888888766  599


Q ss_pred             ccCHHHHHHHHHHHHhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCceEE-EEEeeCCCcc
Q 014631          198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG-WLVTSDPSGI  274 (421)
Q Consensus       198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~~  274 (421)
                      +++.+++++|+++|++||+++++||+|.....  .+..   ........+.+ +.||||.|+++   +| |++++     
T Consensus       143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~---~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~-----  210 (333)
T PRK10534        143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCE---LKEITQYCDSF-TICLSKGLGTP---VGSLLVGN-----  210 (333)
T ss_pred             ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCC---HHHHHhcCCEE-EEEeEcCCCCc---ccceEEcC-----
Confidence            99999999999999999999999999874221  0111   11111111223 23899998654   67 56654     


Q ss_pred             hhHHHHHHHHhhhccccc---CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631          275 LQELRIVDSIKGYLNISS---GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM  351 (421)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~  351 (421)
                         +++++.+......+.   ..+.+++.++...++.    . .+..++.++.++++.+.|+++ |+. +..| .++|+|
T Consensus       211 ---~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~----~-~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~~nfv~  279 (333)
T PRK10534        211 ---RDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH----N-VARLQEDHDNAAWLAEQLREA-GAD-VMRQ-DTNMLF  279 (333)
T ss_pred             ---HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh----h-HHHHHHHHHHHHHHHHHHHhC-CCc-cCCC-CceEEE
Confidence               467777766554322   1233455555555542    1 233334455678999999987 887 4344 688999


Q ss_pred             EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      ++++..      +..++ .++++++||.++|+.      .+|++.+  .+++++++++++|++++.
T Consensus       280 ~~~~~~------~~~~~-~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~  332 (333)
T PRK10534        280 VRVGEE------QAAAL-GEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA  332 (333)
T ss_pred             EECCch------hHHHH-HHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence            988631      24444 466788899999873      5788775  789999999999997764

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.97  E-value=9.8e-29  Score=234.95  Aligned_cols=333  Identities=15%  Similarity=0.113  Sum_probs=234.3

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--C--CCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--F--DCYSP----SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~--~~y~~----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      +|+.+...    +++|+.+.+++.+.++...  .  ..|..    ..++.++|+.++++++.     ..+++|++|+|++
T Consensus         2 yld~a~~~----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~v~~~~g~t   72 (376)
T TIGR01977         2 YFDNAATT----YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA-----PSSAHVVFTNNAT   72 (376)
T ss_pred             CccCcccC----CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc-----CCCCeEEEeCCHH
Confidence            45555422    4678899999988887532  1  12322    24467888999998842     1335899999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631          120 QAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC  195 (421)
Q Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt  195 (421)
                      ++++.++.+++++||+|++..++|.++.    ..++..|.+++.++.+.  ++.+|++++++.++++++++++++|+|||
T Consensus        73 ~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~t  150 (376)
T TIGR01977        73 TALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVT  150 (376)
T ss_pred             HHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCc
Confidence            9999999998899999999999998764    34455699998888753  45689999999998889999999999999


Q ss_pred             ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631          196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL  275 (421)
Q Consensus       196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  275 (421)
                      |..++   +++|.++|+++|+++|+|++++...    ....+...+.   .+++.|++|+++.|. .+|.+++++.....
T Consensus       151 G~~~~---~~~i~~l~~~~~~~livD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~  219 (376)
T TIGR01977       151 GTILP---IEEIGELAQENGIFFILDAAQTAGV----IPIDMTELAI---DMLAFTGHKGLLGPQ-GTGGLYIREGIKLK  219 (376)
T ss_pred             cccCC---HHHHHHHHHHcCCEEEEEhhhccCc----cCCCchhcCC---CEEEecccccccCCC-CceEEEEcCCcCcC
Confidence            99977   6678899999999999999998733    2222222222   277889999975442 36777765432100


Q ss_pred             hHHHHHH--------HH---hh--hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          276 QELRIVD--------SI---KG--YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       276 ~~~~~~~--------~~---~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                         .+..        .+   ..  .....++++.....++.++++...+...+.+.++.+.+.+++.+.|.+++++.+. 
T Consensus       220 ---~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~-  295 (376)
T TIGR01977       220 ---PLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY-  295 (376)
T ss_pred             ---ceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-
Confidence               0000        00   00  0011235666666777777765445567788889999999999999988887733 


Q ss_pred             CCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----------CCCeEEEEec--CCHHHHHHH
Q 014631          343 KPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----------MKNWLRITFA--IEPSALEEG  406 (421)
Q Consensus       343 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----------~~~~iRi~~~--~~~e~l~~~  406 (421)
                      .|.    .+..+++.++.      .+..++...|.+++||.+.+|..+.          ..+.+|++++  ++++|++++
T Consensus       296 ~~~~~~~~~~~v~~~~~~------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~  369 (376)
T TIGR01977       296 GPADPANRVGVVSFTVEG------IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKL  369 (376)
T ss_pred             CCCCccccCCeEEEEECC------CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHH
Confidence            331    13455555542      1455666666555599999887553          2478999998  899999999


Q ss_pred             HHHHHH
Q 014631          407 LGRIKA  412 (421)
Q Consensus       407 ~~~l~~  412 (421)
                      +++|++
T Consensus       370 ~~~l~~  375 (376)
T TIGR01977       370 LEALSE  375 (376)
T ss_pred             HHHHhh
Confidence            999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.97  E-value=5.7e-28  Score=227.91  Aligned_cols=322  Identities=14%  Similarity=0.148  Sum_probs=219.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC-------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC
Q 014631           60 FRTTPVAADAVVDAVRSAEFD-------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP  132 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~-------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~  132 (421)
                      -+..+.+.+++.+.-......       .+....-+.++++.++++++      +  +++++++|+++++..++.+++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~i~~~~g~t~al~~~l~~~~~~   82 (361)
T cd06452          11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG------M--DEARVTPGAREGKFAVMHSLCEK   82 (361)
T ss_pred             CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC------C--ceEEEeCCHHHHHHHHHHHhcCC
Confidence            467888889988887431110       11111235789999999873      3  78999999999999999999999


Q ss_pred             CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-------cCceEEEEeCCCCCcccccCHHHHH
Q 014631          133 GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-------ENTVAMVIVNPGNPCGNVFTYQQLQ  205 (421)
Q Consensus       133 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-------~~~~~i~~~~p~nptG~~~~~~~l~  205 (421)
                      ||+|+++.++|.+....++..|++++.++.+++.++.+|++++++.++       ++++++++++|+||||..   .+++
T Consensus        83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~  159 (361)
T cd06452          83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK  159 (361)
T ss_pred             CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence            999999999998887788899999999998655456899999998875       367899999999999988   6688


Q ss_pred             HHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631          206 KIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK  285 (421)
Q Consensus       206 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~  285 (421)
                      +|.++|+++|+++|+|++|+...    ...+...++   ..++++|+||+++ ++.|+||++++        +++.+++.
T Consensus       160 ~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~~---~d~~~~s~~K~l~-~~~~~G~l~~~--------~~~~~~l~  223 (361)
T cd06452         160 KIAKVCHEYGVPLLLNGAYTVGR----MPVSGKELG---ADFIVGSGHKSMA-ASAPIGVLATT--------EEWADIVF  223 (361)
T ss_pred             HHHHHHHHcCCeEEEECCcccCC----cCCCHHHcC---CCEEEecCCcccc-CCCCeEEEEEC--------HHHHHHHh
Confidence            99999999999999999998522    111222232   2388999999986 45599999985        24566664


Q ss_pred             hhccc---------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC-CCCceeEEEEecC
Q 014631          286 GYLNI---------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR-KPEGSMFVMVKLN  355 (421)
Q Consensus       286 ~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~-~~~~~~~~~~~~~  355 (421)
                      .....         ..+.......++..++... .+.++.. ++..++++++.+.|+++||+.++. .+....++.++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~-~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~  301 (361)
T cd06452         224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KERVKRW-DEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP  301 (361)
T ss_pred             ccccccccceeeeeccccCchHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC
Confidence            43321         0111122233333333321 1223332 333445578899999988887331 2334456655554


Q ss_pred             cccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Q 014631          356 LSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       356 ~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~  414 (421)
                      ....   .......++...| +++||.+.   ..+...++|++.. .++++++.++++|+++.
T Consensus       302 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~---~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         302 SFDEIAKKHKRRGYFLYSEL-KKRGIHGI---KPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             CcchhhhhccccchhHHHHH-HHcCceEE---cCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            1100   0001223566666 56699853   2234568999984 79999999999998764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.97  E-value=1.1e-27  Score=229.19  Aligned_cols=332  Identities=18%  Similarity=0.165  Sum_probs=228.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ++++++|+.++   |.++..+|++++++.+++++....      .++....+.++++.++++++        .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~  112 (406)
T PRK13393         44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT  112 (406)
T ss_pred             CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence            46789998887   667778999999999999863211      11112234678888888772        24555555


Q ss_pred             CHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeC
Q 014631          117 GCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~  190 (421)
                      +|++++..++..+..  +||.|++....|.+....+...|.++..++.       .|++.+++.+.    ++++++++++
T Consensus       113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~  185 (406)
T PRK13393        113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES  185 (406)
T ss_pred             CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence            556788888887654  7787877777887777777878887766653       25666666553    3567788889


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      ++|++|.+.+   +++|.++|+++|+++|+||+|+...++  |.+......+. .+..++++||||.|+++|   ||+++
T Consensus       186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~G---G~~~~  258 (406)
T PRK13393        186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMG---GYITG  258 (406)
T ss_pred             CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccC---ceeeC
Confidence            9999999966   888899999999999999999844433  22221111111 123577789999998888   99887


Q ss_pred             eCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631          269 SDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE  345 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~  345 (421)
                      +        +++.+.+.....   .+.+.++..+.++.++|+...+. . ..+.+++++++++.+.|+++ ++.++ .+.
T Consensus       259 ~--------~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~-~-~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~  326 (406)
T PRK13393        259 S--------AALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS-S-AERERHQDRVARLRARLDKA-GIPHL-PNP  326 (406)
T ss_pred             C--------HHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC-H-HHHHHHHHHHHHHHHHHHHc-CCCcC-CCC
Confidence            4        356666655432   23456667777777777643222 1 23456778899999999876 77633 444


Q ss_pred             ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                       +.++.+.++..     ....++...|++++||.+.++..+..   ...+|++++  ++++|+++++++|.++++++
T Consensus       327 -~~i~~v~~~~~-----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        327 -SHIVPVMVGDP-----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             -CCeEEEEeCCH-----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence             44555544321     02456666666657999998755432   367999998  89999999999999988764

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.97  E-value=9e-28  Score=228.02  Aligned_cols=336  Identities=15%  Similarity=0.197  Sum_probs=231.0

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|+.++||..|....+.+ ..+|.+.+++.+++++..  .. ......++++.+++++.+..+    .+.++++++|++
T Consensus        26 ~~G~~~lD~~s~~~~~~lG-~~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~   97 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLG-HCHPTVTKAVQEQLDDIW--HV-SNLFTNSLQEEVASLLAENSA----GDLVFFCNSGAE   97 (377)
T ss_pred             CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcc--cc-ccccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence            3488999999997655555 488999999999998632  11 223457899999999976433    258999999999


Q ss_pred             HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHh-hcCceeE---eeeccCCCCcc--CCHHHHHhhhccCceEEEEeCCC
Q 014631          121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANAR-HTRLEIR---HFDLLPEKGWE--VDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~-~~g~~~~---~~~~~~~~~~~--~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      |+..+++... .+| ++|++.+++|++...... ..+....   ..+..++..+-  -|++++++.+.++++++++..++
T Consensus        98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~  177 (377)
T PRK02936         98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ  177 (377)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence            9999998643 344 679999999987643322 2221110   11111110000  17889999888778888777778


Q ss_pred             CCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          193 NPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       193 nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      +++|.. .+++.+++|.++|++||+++|+||+|.++.+.|... .....+...++   .++||.++ +|+|+||++++  
T Consensus       178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~--  250 (377)
T PRK02936        178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGK--  250 (377)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEc--
Confidence            888876 578999999999999999999999999887766532 22222222222   37999987 89999999985  


Q ss_pred             CcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc----CCCccccCCCCc
Q 014631          272 SGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE----IPCITCPRKPEG  346 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g~~~~~~~~~  346 (421)
                            +++.+.+.... ..+.+++++.+.++.++|+....   ++..++++++.+++.+.|++    ++.+..+ . ..
T Consensus       251 ------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~-~~  319 (377)
T PRK02936        251 ------KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNI-R-GK  319 (377)
T ss_pred             ------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-e-ec
Confidence                  35667665443 23446789999999999875321   23334555555566655554    3333211 2 34


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      |+++|+.++.       +...+.. .+.++||.+.|+.    .+++|++++  .+++++++++++|.+++
T Consensus       320 g~~~~i~~~~-------~~~~~~~-~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        320 GLMIGIECTE-------EVAPVIE-QLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             ceEEEEEecc-------hHHHHHH-HHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            6889988863       2344544 5577899998853    478999974  88999999999998763

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.97  E-value=1.2e-27  Score=228.78  Aligned_cols=337  Identities=15%  Similarity=0.139  Sum_probs=232.5

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCY--SP------SVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      .++|+.+.+.     |.++.+.+++.+.+........  ..      ...+.++|+.+++++      ++++++|++++|
T Consensus         4 ~~yld~aa~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g   72 (402)
T TIGR02006         4 PIYLDYAATT-----PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSG   72 (402)
T ss_pred             cEEeeCCcCC-----CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence            4788888755     6788999999888753211111  00      123556778888877      467889999999


Q ss_pred             HHHHHHHHHHHhc----CCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631          118 CKQAIQVILTVLA----RPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN  190 (421)
Q Consensus       118 ~~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~  190 (421)
                      ++++++.++.++.    ++||+|+++.++|+++...+   +..|.+++.++.++  ++.+|++++++.+.++++++++++
T Consensus        73 ~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~v~~  150 (402)
T TIGR02006        73 ATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDTILVSIMH  150 (402)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEEC
Confidence            9999999887653    68999999999998765444   44688998888653  456899999999988899999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      ++||||...   ++++|.++|+++|+++++|++++.    |.....+...+.   .+++.|++|.+|.+|  +|++++++
T Consensus       151 ~~n~tG~~~---~~~~I~~l~~~~g~~livD~a~a~----g~~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l~~~~  218 (402)
T TIGR02006       151 VNNEIGVIQ---DIAAIGEICRERKVFFHVDAAQSV----GKIPINVNELKV---DLMSISGHKIYGPKG--IGALYVRR  218 (402)
T ss_pred             CCcCceecc---cHHHHHHHHHHcCCEEEEEcchhc----CCcccCccccCC---CEEEEehhhhcCCCc--eEEEEEcc
Confidence            999999995   478999999999999999999976    322223333332   277788999876556  89998874


Q ss_pred             CCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-e-
Q 014631          271 PSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-S-  347 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-~-  347 (421)
                      .....-.+ +....... ....++++.....++..+++.. ..+++...++.+++++++.+.|++++++.+...+.. . 
T Consensus       219 ~~~~~~~~-~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p  296 (402)
T TIGR02006       219 KPRVRLEA-LIHGGGHERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVP  296 (402)
T ss_pred             CCCCCCCc-eecCCCccCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence            32110000 10000000 1122466777777777777642 346788888999999999999998888763211111 1 


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHHH
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEEG  406 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~~  406 (421)
                      ....+.|+..      +..++...+   +++.+..|..+..                   .+++|+|++  ++++|++++
T Consensus       297 ~~~~v~f~~~------~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l  367 (402)
T TIGR02006       297 GNLNVSFNYV------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYA  367 (402)
T ss_pred             CeEEEEEeCc------CHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHH
Confidence            1112334321      233443332   4888888876532                   368999998  899999999


Q ss_pred             HHHHHHHHHHhh
Q 014631          407 LGRIKAFCQRHA  418 (421)
Q Consensus       407 ~~~l~~~~~~~~  418 (421)
                      ++.|.++++.++
T Consensus       368 ~~~l~~~~~~~~  379 (402)
T TIGR02006       368 VKLVKSAIDKLR  379 (402)
T ss_pred             HHHHHHHHHHHH
Confidence            999999987753

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.97  E-value=3.2e-27  Score=226.26  Aligned_cols=330  Identities=19%  Similarity=0.217  Sum_probs=225.1

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP-----SVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      +..+++++.|.|.    ++.|+.+.++..+.  .. ...|.+     ..|.+++++++++++.+.+|.  +.++++++++
T Consensus        19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~   89 (398)
T cd00613          19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE   89 (398)
T ss_pred             ccCcccccccccC----CcCcHHHHHHhccc--cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence            5577999999976    46667776666555  21 234554     678999999999999998874  4456777765


Q ss_pred             HH-HHHHHHHHHhcCC--CCeEEEcCCCCcchHHHHhhcC----ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631          118 CK-QAIQVILTVLARP--GANILLPKPGFPLYEANARHTR----LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN  190 (421)
Q Consensus       118 ~~-~al~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~  190 (421)
                      ++ ++...+..++..+  ||+|+++++.|.++...+...|    .+++.++.++  ++.+|++++++.+.++++++++++
T Consensus        90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~  167 (398)
T cd00613          90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY  167 (398)
T ss_pred             hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence            44 4545555555665  9999999999999988887777    8888888643  346899999999988899999988


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEE
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWL  266 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~  266 (421)
                      |+ |+|.+.  +.+++|.++|++||+++|+|++|..+..    ......++   ..+++.|+||++ +|    |+++|++
T Consensus       168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~----~~~~~~~~---~d~~~~s~~K~~-~p~g~Ggp~~g~l  236 (398)
T cd00613         168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG----LKPPGEYG---ADIVVGNLQKTG-VPHGGGGPGAGFF  236 (398)
T ss_pred             CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccC----CCChHHcC---CCEEEeeccccC-CCCCCCCCceeEE
Confidence            85 899983  4579999999999999999998865321    11111222   348889999997 54    7889999


Q ss_pred             EeeCCCcchhHHHHHHHHhhh-----------------------------c-ccccCCchHHHHHHHHHhhccchhHHHH
Q 014631          267 VTSDPSGILQELRIVDSIKGY-----------------------------L-NISSGPATFVQGAVPQIFKNTKEDFFSK  316 (421)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~-----------------------------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~  316 (421)
                      ++++        ++.+.+...                             . ....+.+.....++...+......++++
T Consensus       237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~  308 (398)
T cd00613         237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKE  308 (398)
T ss_pred             EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHH
Confidence            9863        233332110                             0 0011222333333333333334567888


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCccccCCCCceeE--EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631          317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMF--VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI  394 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi  394 (421)
                      .+++++++++++.+.|+++++..   .+.+..+  +++.++...   ..+..+++..| .++||.+.... ....+.+|+
T Consensus       309 ~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~v~~~~~~~~---~~~~~~~~~~L-~~~gi~~~~~~-~~~~~~lRi  380 (398)
T cd00613         309 IAERAHLNANYLAKRLKEVGGVL---PFNGPFFHEFVLRLPPLY---GIRAEDLAKAL-IDGGFHAPTMY-LPVDGTLMI  380 (398)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcc---cCCCCeeEEEEEEcCCcc---hHHHHHHHHhh-hhcCccccccc-cCCCCeEEE
Confidence            89999999999999999874443   2333333  455554210   01345666665 56798764422 123578999


Q ss_pred             Eec--CCHHHHHHHHHHH
Q 014631          395 TFA--IEPSALEEGLGRI  410 (421)
Q Consensus       395 ~~~--~~~e~l~~~~~~l  410 (421)
                      +++  ++++|++++++.|
T Consensus       381 s~~~~~t~edid~~~~~L  398 (398)
T cd00613         381 EPTETETKEELDALLEAL  398 (398)
T ss_pred             EcCCCCCHHHHHHHHHhC
Confidence            998  8999999998864

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.97  E-value=5.2e-28  Score=214.08  Aligned_cols=310  Identities=21%  Similarity=0.296  Sum_probs=200.2

Q ss_pred             CCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH-HH-HHhc------------CCCCeEEEcCCCC
Q 014631           79 FDCY-SPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV-IL-TVLA------------RPGANILLPKPGF  143 (421)
Q Consensus        79 ~~~y-~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~-~~-~~l~------------~~gd~Vl~~~p~y  143 (421)
                      ..+| +...|++++|+..++++      ++++++|++..+++-.+.. ++ ++++            ++.-+.+++.|+|
T Consensus        61 ~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY  134 (425)
T PF12897_consen   61 CRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY  134 (425)
T ss_dssp             TTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred             ccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence            4589 89999999999999999      6889999997766544322 11 2221            1234889999999


Q ss_pred             cchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeCC--CCCcccccCHHHHHHHHHH-HHhcCcEE
Q 014631          144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVNP--GNPCGNVFTYQQLQKIAEK-ARKLGIMV  218 (421)
Q Consensus       144 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~l  218 (421)
                      .-+..+++.+|++.+.||..++   ++|+|.+++++.  +..|++ .|.|  +||||+++|.+.+++++.+ +...++.|
T Consensus       135 DRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGi-WcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI  210 (425)
T PF12897_consen  135 DRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGI-WCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRI  210 (425)
T ss_dssp             HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEE-EE-SSS-TTT-----HHHHHHHHHS--SSTT-EE
T ss_pred             hHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceE-EeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEE
Confidence            9999999999999999998654   589999999883  445665 5556  8999999999999999998 34679999


Q ss_pred             EEcccccccccCCC-Cccc---c----cccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-c
Q 014631          219 ISDEVYDHLTFGST-PYVR---M----GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-N  289 (421)
Q Consensus       219 i~De~~~~~~~~~~-~~~~---~----~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~  289 (421)
                      +.|++|+...+.+. ....   +    ...+..++++.+.|.||. ..+|.+++++..+.        +-++.+.+.. .
T Consensus       211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~  281 (425)
T PF12897_consen  211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSV  281 (425)
T ss_dssp             EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHH
T ss_pred             EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcC
Confidence            99999998776332 2111   1    122456789999999999 79999999999863        3344444443 3


Q ss_pred             cccCCchHHHHHHHHHhhccc---hhHHHHHHHHHHHHHHHHHHHhhc-CC---CccccCCCCceeEEEEecCcccccCC
Q 014631          290 ISSGPATFVQGAVPQIFKNTK---EDFFSKIVDILRDTADICYDRIKE-IP---CITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       290 ~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~l~~-~~---g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+.++..+.|..-..++.+..   ..+++++++.++-+.+.+.+.|++ +.   ++..+..|.||+|+++.....     
T Consensus       282 ~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G-----  356 (425)
T PF12897_consen  282 QTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG-----  356 (425)
T ss_dssp             H-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-----
T ss_pred             ceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-----
Confidence            456899999999999997632   567788888888888888887774 32   344477999999999988753     


Q ss_pred             CChHHHHHHHHhhcCeeEEe-CCCCCC-----CCeEEEEec-CCHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLP-GMAVGM-----KNWLRITFA-IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~-g~~~~~-----~~~iRi~~~-~~~e~l~~~~~~l~~~~  414 (421)
                        ...-+.+++++.||.+.| |..|-.     ...|||+++ .+.|+++.+++.+.-++
T Consensus       357 --~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv  413 (425)
T PF12897_consen  357 --TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCV  413 (425)
T ss_dssp             ---HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHH
T ss_pred             --hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHH
Confidence              344455688999999999 666522     468999999 67899999999887654

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.96  E-value=2e-27  Score=226.48  Aligned_cols=335  Identities=17%  Similarity=0.150  Sum_probs=225.6

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|..++||..|...... ...+|.+.+++.+++++.... .+.......+|.+.++++.    +    .+.++++++|+
T Consensus        37 ~~G~~~lD~~~g~~~~~l-Gh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs  107 (396)
T PRK04073         37 PEGNRYMDMLSAYSAVNQ-GHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT----G----KDMVLPMNTGA  107 (396)
T ss_pred             CCCCEEEEcCCCHHhccC-CCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC----C----CCeEEEcCChH
Confidence            358889999877544322 257899999999998864221 1111222245555555543    2    36899999999


Q ss_pred             HHHHHHHHHhcC---------CC-CeEEEcCCCCcchHHHHhh-cCceeE---eeeccCC---CCccCCHHHHHhhhccC
Q 014631          120 QAIQVILTVLAR---------PG-ANILLPKPGFPLYEANARH-TRLEIR---HFDLLPE---KGWEVDLDGLEALADEN  182 (421)
Q Consensus       120 ~al~~~~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~---~~~~~~~---~~~~~d~e~l~~~~~~~  182 (421)
                      +|+..+++....         +| ++|+..+.+|++....+.. .+....   .-+..+.   -.+ .|++++++.+.++
T Consensus       108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~~  186 (396)
T PRK04073        108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEALKAAITPN  186 (396)
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHHHHHhcccC
Confidence            999999887631         34 6888988889876543322 221100   0000000   011 1788999988878


Q ss_pred             ceEEEEeCCCCCcccccCHH-HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631          183 TVAMVIVNPGNPCGNVFTYQ-QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW  261 (421)
Q Consensus       183 ~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  261 (421)
                      ++++++..++||+|..++++ .+++|.++|++||+++|+||+|+++.+.|..+. ....+...+   +.++||.++++|+
T Consensus       187 ~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pd---i~~~sK~lg~gg~  262 (396)
T PRK04073        187 TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPD---MYILGKALGGGVF  262 (396)
T ss_pred             eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCC---EEEecccccCCCC
Confidence            88777777799999998764 699999999999999999999998876654321 112222222   3368999998889


Q ss_pred             eEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--CCc
Q 014631          262 RLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--PCI  338 (421)
Q Consensus       262 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~  338 (421)
                      |+||++++        +++++.+.... ..+.+.+++.+.++.++|+...+.   ...++.+++++++.+.|+++  +.+
T Consensus       263 ~ig~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i  331 (396)
T PRK04073        263 PISCVAAN--------RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMI  331 (396)
T ss_pred             cceEEEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCcc
Confidence            99999985        35777665432 234567889999988888642222   23455666788888888765  333


Q ss_pred             cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      . . .+..|.+++++++.       +..++..++ .++||.+.+..    .+++|++++  .++|++++++++|++++
T Consensus       332 ~-~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        332 K-E-VRGRGLFIGVELNE-------PARPYCEAL-KEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             c-c-eecceEEEEEEecc-------hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence            3 2 12336678887753       355676665 56799997632    468999975  89999999999999875

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.96  E-value=1.7e-27  Score=229.27  Aligned_cols=346  Identities=18%  Similarity=0.197  Sum_probs=229.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|.++|||..|......+ ..+|.+.+++.+++...  ..|....+..++...+++.+.+.+|  ...+++++++|+++|
T Consensus        34 dG~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgsea  108 (413)
T cd00610          34 DGNRYLDFLSGIGVLNLG-HNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEA  108 (413)
T ss_pred             CCCEEEEcCccHHhhccC-CCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHH
Confidence            488999999875432222 37889999999999763  3444332334555555555555444  357899999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcC-------------ceeEeeeccCC----CCccCCHHHHHhhhcc-
Q 014631          122 IQVILTVLA--RPGANILLPKPGFPLYEANARHTR-------------LEIRHFDLLPE----KGWEVDLDGLEALADE-  181 (421)
Q Consensus       122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~d~e~l~~~~~~-  181 (421)
                      +..+++.+.  .++++|++.+++|+++...+...+             .++..+|.+..    ..+..|++.+++.+++ 
T Consensus       109 ~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~  188 (413)
T cd00610         109 VEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH  188 (413)
T ss_pred             HHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC
Confidence            999998874  568999999999998755443322             12344544311    1244588999888865 


Q ss_pred             -CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631          182 -NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV  258 (421)
Q Consensus       182 -~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  258 (421)
                       +...+++++| ++++|..+ +.+.+++|.++|++||+++|+||+|+++.+.|... ....++...+   +.|+||.++.
T Consensus       189 ~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~d---~~t~sK~l~~  264 (413)
T cd00610         189 PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEPD---IVTLGKGLGG  264 (413)
T ss_pred             CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCCC---eEEEcccccC
Confidence             3444556666 66779876 66779999999999999999999999875544421 1122222212   3488999865


Q ss_pred             CCceEEEEEeeCCCcchhHHHHHHHH--hhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          259 PGWRLGWLVTSDPSGILQELRIVDSI--KGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       259 ~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                       |+|+||++++        +++++.+  .... ..+.+.+++.+.++.++++...+   .+..++++++.+++.+.|+++
T Consensus       265 -g~~~g~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~  332 (413)
T cd00610         265 -GLPLGAVLGR--------EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLREL  332 (413)
T ss_pred             -ccccEEEEEc--------HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence             7999999985        3567765  2222 23456778888888777764222   345566677777777777654


Q ss_pred             C---CccccCCCCceeEEEEecCccccc---CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631          336 P---CITCPRKPEGSMFVMVKLNLSLLE---GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       336 ~---g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~  407 (421)
                      .   ++... ....|.++++.++.....   .......+... +.++||.+.|+.    .+.+|++++  ++++++++++
T Consensus       333 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~  406 (413)
T cd00610         333 AEKHPLVGD-VRGRGLMIGIELVKDRATKPPDKELAAKIIKA-ALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGL  406 (413)
T ss_pred             HhhCCcEEE-eecCceEEEEEEecCCCcCCcchHHHHHHHHH-HHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHH
Confidence            1   11101 123467788877642100   00123455555 467799999975    578999887  6899999999


Q ss_pred             HHHHHHH
Q 014631          408 GRIKAFC  414 (421)
Q Consensus       408 ~~l~~~~  414 (421)
                      ++|++++
T Consensus       407 ~~l~~~l  413 (413)
T cd00610         407 DALDEAL  413 (413)
T ss_pred             HHHHHhC
Confidence            9998763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.96  E-value=6.3e-27  Score=222.26  Aligned_cols=339  Identities=14%  Similarity=0.110  Sum_probs=227.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-------FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      ..+.||++--.   .. .|+++++.+++.+......       ...+.....+.++|+.+|++++      +  ++++++
T Consensus        17 ~~~~~~~~~~~---~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g------~--~~~~~~   84 (387)
T PRK09331         17 EEEFINLDPIQ---RG-GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG------M--DEARVT   84 (387)
T ss_pred             cccccccChhh---cC-CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC------C--CcEEEe
Confidence            45667775332   22 3788999999999875311       0111123346899999999983      2  468889


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------CceEEEE
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-------NTVAMVI  188 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-------~~~~i~~  188 (421)
                      +|+++++..++.+++++||+|+++.++|.+....++..|++++.++...+.++.+|++++++.+++       +++++++
T Consensus        85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l  164 (387)
T PRK09331         85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL  164 (387)
T ss_pred             CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence            999999999999999999999999999998888888999999999874334567899999998753       5788999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      ++|+|+||..   .++++|.++|+++|+++|+|++|+...    ...+...++.   .++++|+||+++ ++.++||+++
T Consensus       165 ~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~g~----~~~~~~~~g~---D~~~~s~~K~l~-~~~~~G~l~~  233 (387)
T PRK09331        165 THVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTVGR----MPVDGKKLGA---DFIVGSGHKSMA-ASAPSGVLAT  233 (387)
T ss_pred             ECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCcccCC----cCCCHHHcCC---CEEEeeCccccc-CCCCEEEEEE
Confidence            9999999988   569999999999999999999998632    1122223332   377899999976 4558999998


Q ss_pred             eCCCcchhHHHHHHHHhhhcc---------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          269 SDPSGILQELRIVDSIKGYLN---------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      ++        ++++.+.....         ..++.+.....++...++. ..... +..++..++.+++++.|++++|+.
T Consensus       234 ~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~-~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~  303 (387)
T PRK09331        234 TE--------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPH-VVERV-KRWDEEVKKARWFVDELEKIEGFK  303 (387)
T ss_pred             CH--------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHhcCCCEE
Confidence            52        45555433211         1112222222322333322 11222 234455677788999999998988


Q ss_pred             ccCC-CCceeEEEEecCccc---ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-cCCHHHHHHHHHHHHHHH
Q 014631          340 CPRK-PEGSMFVMVKLNLSL---LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-AIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       340 ~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~~~~e~l~~~~~~l~~~~  414 (421)
                      ++.. +....+..+..+...   .........+...| +++||...+.   +....+|+.. +.++++++++++.|++++
T Consensus       304 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~  379 (387)
T PRK09331        304 QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIA  379 (387)
T ss_pred             EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHH
Confidence            4311 233444444444110   00011223455555 6779984332   2245677776 479999999999999998


Q ss_pred             HHhh
Q 014631          415 QRHA  418 (421)
Q Consensus       415 ~~~~  418 (421)
                      +++.
T Consensus       380 ~~~~  383 (387)
T PRK09331        380 EKYG  383 (387)
T ss_pred             HhcC
Confidence            7653

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.96  E-value=4.3e-27  Score=216.33  Aligned_cols=328  Identities=20%  Similarity=0.195  Sum_probs=246.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      +++++||+.++   |.++..+|.++++..+.+++...      .-++...-+.+|++.+|+|++        .+..++.+
T Consensus        38 ~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--------~e~al~f~  106 (388)
T COG0156          38 GRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--------AEAALLFS  106 (388)
T ss_pred             CceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--------CCcEEEEc
Confidence            57899999998   77788899999999999987311      123444457899999999984        34566666


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---C---ceEEEEeC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---N---TVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~---~~~i~~~~  190 (421)
                      ++-.|+..++.+|++++|.|+.+.-.|.+....++..+++.+.+.++       |++.|++.+.+   .   .+.|+...
T Consensus       107 SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~Hn-------D~~~Le~~l~~~~~~~~~~~~Ivteg  179 (388)
T COG0156         107 SGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHN-------DLDHLEALLEEARENGARRKLIVTEG  179 (388)
T ss_pred             ccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCC-------CHHHHHHHHHhhhccCCCceEEEEec
Confidence            66778888899999999999999999999999999999999988763       77888888755   2   34555556


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc--cccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM--GVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      .-...|.+   .+|++|++++++||.++++||+|+...++..+....  ..+...+..|.++||||+||..|   ||+.+
T Consensus       180 VfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g  253 (388)
T COG0156         180 VFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAG  253 (388)
T ss_pred             cccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeC
Confidence            66789998   559999999999999999999999988875443333  33333445789999999999888   99998


Q ss_pred             eCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631          269 SDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE  345 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~  345 (421)
                      +        ..+.+.+.....   ++.+.+|...+++.++++.  .....+.+++++++...+.+.++.. ++. . .+.
T Consensus       254 ~--------~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~--l~~~~~~r~~L~~~~~~~~~~~~~~-~~~-~-~~s  320 (388)
T COG0156         254 S--------AALIDYLRNRARPFIFSTALPPAVAAAALAALRI--LEEGPERRERLQELAAFFRSLLKAL-GLV-L-LPS  320 (388)
T ss_pred             c--------HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc-CCc-c-CCC
Confidence            6        357777766532   2335555555566666764  2234566778888888888666655 655 2 466


Q ss_pred             ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      .+.+..+.+....     ...++...++++ ||.+.+..++..+   ..+|+|++  +++++|+.+++.|.++
T Consensus       321 ~s~I~pv~~gd~~-----~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         321 ESPIIPVILGDEE-----RALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             CCCeeeeEeCCHH-----HHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence            6667766665431     255666666665 9999988777653   67999997  8999999999998875

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.96  E-value=6e-27  Score=221.05  Aligned_cols=319  Identities=16%  Similarity=0.131  Sum_probs=219.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK  140 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~  140 (421)
                      .+++.+.+++.+.+.. ....|.  .-..++|+.++++++    .+.+...|++++|+++++..++..+..+||++++..
T Consensus         9 ~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~----~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~   81 (355)
T TIGR03301         9 STSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAG----GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLI   81 (355)
T ss_pred             CCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhc----CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEEC
Confidence            4567787777763221 111232  224567777777763    222223688899999999999999988888877766


Q ss_pred             CCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631          141 PGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI  216 (421)
Q Consensus       141 p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~  216 (421)
                      +.+++  +...++..|.+++.++.+.  ++.+|++++++.+++  +.+.+++++++||||...+   +++|.++|++||+
T Consensus        82 ~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~  156 (355)
T TIGR03301        82 NGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHGA  156 (355)
T ss_pred             CCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcCC
Confidence            65554  3567788899999888643  356899999998864  3456778889999999854   8899999999999


Q ss_pred             EEEEcccccccccCCCCcccccccCCCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------
Q 014631          217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------  287 (421)
Q Consensus       217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------  287 (421)
                      ++|+|++++...    ...++..++   ..++++|++|++ +++|  +||+++++        ++++.+...        
T Consensus       157 ~livD~~~s~g~----~~~~~~~~~---~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~~~~  219 (355)
T TIGR03301       157 VLIVDAMSSFGA----IPIDIEELD---VDALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARSLYLDL  219 (355)
T ss_pred             EEEEEeccccCC----cccchhhcC---ccEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCCceeeH
Confidence            999999877532    122333332   337789999986 4455  79999863        344444311        


Q ss_pred             ----------cccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCC--CceeEEEEec
Q 014631          288 ----------LNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRKP--EGSMFVMVKL  354 (421)
Q Consensus       288 ----------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~--~~~~~~~~~~  354 (421)
                                .....+++...+.++.++++...+. ++++..++++++++++.+.|+++ |+.++..+  .++.++|+.+
T Consensus       220 ~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~  298 (355)
T TIGR03301       220 YDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLY  298 (355)
T ss_pred             HHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEEC
Confidence                      1112356777777777777643333 37888889999999999999887 77633222  2345677777


Q ss_pred             CcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      +...   ..+..++..+ +.++||.+.+|..+.. +++||++.  +++++++++++.|++++
T Consensus       299 ~~~~---~~~~~~~~~~-l~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~~  355 (355)
T TIGR03301       299 PDDP---DFDFDDFYQE-LKERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDAL  355 (355)
T ss_pred             CCCC---cchHHHHHHH-HHHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence            6311   0123455554 5778999999875543 79999985  68999999999998753

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.96  E-value=8.1e-27  Score=222.90  Aligned_cols=336  Identities=18%  Similarity=0.198  Sum_probs=226.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|..++||..|....+.+. .+|.+.+++.+++++... .......-..++.+.++++.    +    .+.++++++|+
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~sGs  107 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT----F----AERVFFANSGA  107 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC----C----CCEEEEeCchH
Confidence            34888999988754444444 889999999999876321 11111111234444444432    2    36899999999


Q ss_pred             HHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHhh
Q 014631          120 QAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus       120 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +|+..+++....       .+ ++|+..+.+|++....+...+..             +..++.       -|++++++.
T Consensus       108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  180 (403)
T PRK05093        108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAV  180 (403)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHH
Confidence            999999986521       23 57888898998875433222111             111111       178899988


Q ss_pred             hccCceEEEEeCCCCCccccc--CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          179 ADENTVAMVIVNPGNPCGNVF--TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       179 ~~~~~~~i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      +.+++++|++. |.||+|-.+  +.+.+++|.++|++||+++|+||+|+++.++|... +....+....   +.||||.+
T Consensus       181 l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l  255 (403)
T PRK05093        181 IDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKAL  255 (403)
T ss_pred             hcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEecccc
Confidence            87666666554 877777654  88999999999999999999999999987777532 2222221111   45899998


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      + +|+|+||++++        +++++.+.... ..+.+.+++.|.++.++|+...   -.+..++++++++++.+.|+++
T Consensus       256 ~-~G~rig~vv~~--------~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~~  323 (403)
T PRK05093        256 G-GGFPIGAMLTT--------AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---TPEVLEGVKARRQRFVDGLQKI  323 (403)
T ss_pred             c-CCcceEEEEEc--------HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHH
Confidence            7 89999999996        35777776532 2345678899999888776422   1344577888888888888875


Q ss_pred             C-Cccc-cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631          336 P-CITC-PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK  411 (421)
Q Consensus       336 ~-g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~  411 (421)
                      . .... ...+..|.++|+.++....   ....+++..+ .++||.+.|+.    .+++|++++  .+++++++++++|.
T Consensus       324 ~~~~~~~~~~~~~G~~~~~~l~~~~~---~~~~~~~~~l-~~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~  395 (403)
T PRK05093        324 NQKYGVFSEIRGMGLLIGAELKPQYK---GRARDFLNAA-AEEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFE  395 (403)
T ss_pred             HhhCCCeEeEeeCceEEEEEecCcch---hHHHHHHHHH-HHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence            1 1111 1234568899988863210   1245677666 45699998742    478999876  68999999999999


Q ss_pred             HHHHHh
Q 014631          412 AFCQRH  417 (421)
Q Consensus       412 ~~~~~~  417 (421)
                      +++.++
T Consensus       396 ~~l~~~  401 (403)
T PRK05093        396 KAVAKV  401 (403)
T ss_pred             HHHHHh
Confidence            998764

>PRK14012 cysteine desulfurase; Provisional

Probab=99.96  E-value=1.2e-26  Score=222.00  Aligned_cols=336  Identities=16%  Similarity=0.188  Sum_probs=225.4

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHh--cC--CCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVR--SA--EFDCYS------PSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~--~~--~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .++|+.+.+.     |.++.+.+++.+.+.  ..  +.....      ......++|+.+++++      +.++++++++
T Consensus         4 ~iyld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~   72 (404)
T PRK14012          4 PIYLDYSATT-----PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFT   72 (404)
T ss_pred             eEEecCcCCC-----CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEe
Confidence            3778888755     678889999988875  21  111000      0122457788888887      4567889999


Q ss_pred             CCHHHHHHHHHHHhc----CCCCeEEEcCCCCcchHHHHh---hcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631          116 AGCKQAIQVILTVLA----RPGANILLPKPGFPLYEANAR---HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI  188 (421)
Q Consensus       116 ~g~~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~  188 (421)
                      +|+|++++.++.++.    ++||.|+++.++|++....+.   ..|++++.++.++  ++.+|++++++.++++++++++
T Consensus        73 ~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~  150 (404)
T PRK14012         73 SGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSI  150 (404)
T ss_pred             CCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEE
Confidence            999999999887763    789999999999987755443   3599998888653  4568999999999989999999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      ++++||||.++   ++++|.++|+++|+++|+|++++.    |.....+...+.+   +++.|++|.++ |+ ++|++++
T Consensus       151 ~~~~n~tG~~~---~~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~g-p~-g~G~l~~  218 (404)
T PRK14012        151 MHVNNEIGVIQ---DIAAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLKVD---LMSFSAHKIYG-PK-GIGALYV  218 (404)
T ss_pred             ECcCCCccchh---hHHHHHHHHHHcCCEEEEEcchhc----CCcccCcccCCCC---EEEEehhhccC-CC-ceEEEEE
Confidence            99999999995   478999999999999999999986    3222233333322   66779999764 33 5899988


Q ss_pred             eCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC-C---
Q 014631          269 SDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK-P---  344 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-~---  344 (421)
                      ++.......+.+...-.......++++.....++.+++... .....+..++.+++++++.+.|++++++..... +   
T Consensus       219 ~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~  297 (404)
T PRK14012        219 RRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRV  297 (404)
T ss_pred             ecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccC
Confidence            75321100000000000000112344555555555555432 234566778888999999999988877763211 1   


Q ss_pred             CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHH
Q 014631          345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSAL  403 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l  403 (421)
                      .....+++.+.        +..++... ++  ++.|.+|..|..                   .+.+|++++  ++++|+
T Consensus       298 ~~~~~~~~~~~--------~~~~~~~~-l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dv  366 (404)
T PRK14012        298 PGNLNVSFNYV--------EGESLIMA-LK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEI  366 (404)
T ss_pred             CCEEEEEEeCc--------CHHHHHHh-CC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHH
Confidence            11223444432        12334433 33  777777755422                   367999998  789999


Q ss_pred             HHHHHHHHHHHHHhh
Q 014631          404 EEGLGRIKAFCQRHA  418 (421)
Q Consensus       404 ~~~~~~l~~~~~~~~  418 (421)
                      +++++.|++++++++
T Consensus       367 d~~~~~l~~~~~~~~  381 (404)
T PRK14012        367 DYAIELVRKSIGKLR  381 (404)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987753

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.96  E-value=1.9e-26  Score=218.96  Aligned_cols=324  Identities=17%  Similarity=0.126  Sum_probs=223.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----CCCeE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----PGANI  136 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~V  136 (421)
                      ++++.+.+++.+.+..... ......+..++.+.+.+++.+.+|  .++.++++++|+++++..++..+.+    +||+|
T Consensus        31 ~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~v  107 (371)
T PRK13520         31 EPHPIARKAHEMFLETNLG-DPGLFPGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKPNI  107 (371)
T ss_pred             CchHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCceE
Confidence            4567888999888865211 111112334444455555554444  4456788999999999998877643    57899


Q ss_pred             EEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631          137 LLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI  216 (421)
Q Consensus       137 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~  216 (421)
                      ++.+++|.++...++..|.+++.++.+.  ++.+|++++++.++++++.++++.++|+||...+   +++|.++|+++|+
T Consensus       108 l~~~~~h~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~  182 (371)
T PRK13520        108 VVPESAHFSFDKAADMLGVELRRAPLDD--DYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALENGI  182 (371)
T ss_pred             EecCcchHHHHHHHHHcCceEEEecCCC--CCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCC
Confidence            9999999999998898999999888643  4568999999999888888888888999999955   8888999999999


Q ss_pred             EEEEcccccccccCC-CCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-----
Q 014631          217 MVISDEVYDHLTFGS-TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-----  290 (421)
Q Consensus       217 ~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-----  290 (421)
                      ++++|++|+.+...- .....+ .....+-..+..|.+|+ +.+|.++|++++.+       +++.+.+......     
T Consensus       183 ~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~-------~~~~~~l~~~~~~~~~~~  253 (371)
T PRK13520        183 FLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRD-------ESYLDALAVDTPYLTSKK  253 (371)
T ss_pred             CEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcC-------HHHHHhhcccCccccCCC
Confidence            999999998754210 110011 11111112444578896 67778899888753       2344444311110     


Q ss_pred             ----ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChH
Q 014631          291 ----SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDM  366 (421)
Q Consensus       291 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (421)
                          .++.+.....++..+++......+++..++..++++++.+.|+++ |+.++..|.. .++.+.++        +..
T Consensus       254 ~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~v~~~~~--------~~~  323 (371)
T PRK13520        254 QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVL-NIVAFDDP--------NPD  323 (371)
T ss_pred             CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCc-eEEEEecC--------CHH
Confidence                122344556666667765445667888899999999999999987 7762324443 35555554        345


Q ss_pred             HHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          367 EFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       367 ~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      ++...| .++||.+.++.   ..+.+|+|++  ++++|++++++.|+++++
T Consensus       324 ~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        324 EVREKL-RERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             HHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence            666665 55699987653   2468999987  789999999999998764

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.96  E-value=1.7e-26  Score=218.28  Aligned_cols=293  Identities=14%  Similarity=0.127  Sum_probs=210.8

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCC--CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSP--DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~--~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~  163 (421)
                      +.++|+.++++++      +++  +.|++|+|+|++++.++.++..+||.+++..+++++.  ...++..|.+++.++.+
T Consensus        37 ~~~~r~~la~l~~------~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~  110 (363)
T TIGR02326        37 VEQIRQQLLALAT------AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG  110 (363)
T ss_pred             HHHHHHHHHHHhC------CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC
Confidence            4566777777763      443  4799999999999999999988888887776666554  46678899999998875


Q ss_pred             CCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          164 PEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      +  ++.+|++++++.++.  +++.+.+++++||||+.+|   +++|.++|+++|+++|+|++++.    |....++..++
T Consensus       111 ~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~----g~~~~~~~~~~  181 (363)
T TIGR02326       111 E--VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF----GGIPIDIAELH  181 (363)
T ss_pred             C--CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc----cCcccchhhcC
Confidence            3  446899999998864  3466788899999999976   78999999999999999998875    33233444444


Q ss_pred             CCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHHHHHhhh-------------------cccccCCchHHHHH
Q 014631          242 STVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIVDSIKGY-------------------LNISSGPATFVQGA  301 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~  301 (421)
                      .+   ++++|++|+++ .+|  +|++++++        ++.+.+...                   ....++++...+.+
T Consensus       182 ~D---~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~a  248 (363)
T TIGR02326       182 ID---YLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHA  248 (363)
T ss_pred             cc---EEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHH
Confidence            33   77899999863 345  79999863        233332110                   01123567778888


Q ss_pred             HHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCe
Q 014631          302 VPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEIPCITCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESV  378 (421)
Q Consensus       302 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv  378 (421)
                      +.++++.... .+++++.++++++++++.+.|+++ |+.++..+  ..+...++.++...  . .+..++...| +++||
T Consensus       249 l~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~L-~~~gi  323 (363)
T TIGR02326       249 FAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDP--D-YRFADFYQRL-KEQGF  323 (363)
T ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCC--C-CCHHHHHHHH-HHCCE
Confidence            7777765333 357788899999999999999887 77633222  23445667665310  0 1344555554 67799


Q ss_pred             eEEeCCCCCCCCeEEEEe-c-CCHHHHHHHHHHHHHHH
Q 014631          379 IVLPGMAVGMKNWLRITF-A-IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       379 ~v~~g~~~~~~~~iRi~~-~-~~~e~l~~~~~~l~~~~  414 (421)
                      .+.+|..+. .+++|+++ + ++.++++++++.|++++
T Consensus       324 ~v~~g~~~~-~~~iRi~~~~~~~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       324 VIYPGKVSQ-VDCFRIGNIGEVDAADITRLLTAIGKAM  360 (363)
T ss_pred             EEECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            999997653 57899996 4 79999999999999876

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.96  E-value=1.5e-27  Score=224.20  Aligned_cols=310  Identities=16%  Similarity=0.132  Sum_probs=222.9

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----------
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----------  131 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----------  131 (421)
                      ++..+.+.+...++... ..|....+..++++.+++|+.+.+|.+.+++++++|+|+|+++..++.++..          
T Consensus        11 ~~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~   89 (345)
T cd06450          11 PPALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGG   89 (345)
T ss_pred             HHHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccc
Confidence            34555666666655433 4588888899999999999999888664566899999999999999988742          


Q ss_pred             --CC--CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCH
Q 014631          132 --PG--ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       132 --~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~  201 (421)
                        ++  +.|++++++|.++...+...|.+++.++.+++  +.+|++++++.+.+      +++++++++|+||||.+   
T Consensus        90 ~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~---  164 (345)
T cd06450          90 GRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI---  164 (345)
T ss_pred             ccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---
Confidence              23  47888999999998888888999999987543  36899999998876      67788899999999998   


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc-cccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM-GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      .++++|.++|+++|+++++|++|+.+.......... ....  +-..+..|+||++ .++.++|++++            
T Consensus       165 ~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~l-~~p~g~g~~~~------------  229 (345)
T cd06450         165 DPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE--RVDSISVDPHKYG-LVPLGCSAVLV------------  229 (345)
T ss_pred             CCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc--ccCEEEEchhHhh-CCCcchHHHHH------------
Confidence            668999999999999999999998866432111110 1111  1124566999984 45567888654            


Q ss_pred             HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                       .             ...+.++...+.   ..+++++.++..++++++.+.|.+++++.++..+..+ ++.+.++.....
T Consensus       230 -~-------------~~~~~~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-iv~f~~~~~~~~  291 (345)
T cd06450         230 -R-------------ALKLWATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLS-LVCFRLKPSVKL  291 (345)
T ss_pred             -H-------------HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcee-EEEEEECCcchh
Confidence             1             333334334443   4667888899999999999999998888744334444 444555431000


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C-CHHHHHHHHHHHHH
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I-EPSALEEGLGRIKA  412 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~-~~e~l~~~~~~l~~  412 (421)
                       ..+..++...| .++|+.+.++..+....++|++++  + +.++++++++.|++
T Consensus       292 -~~~~~~i~~~L-~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         292 -DELNYDLSDRL-NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             -hHHHHHHHHHH-HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence             00234565555 666666666555545678999997  3 88999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.96  E-value=1.9e-26  Score=220.08  Aligned_cols=345  Identities=18%  Similarity=0.201  Sum_probs=230.0

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..|..++||..|....+.+. .+|.+.+++.+++.+...  ..|. .....++.+.++++.    +    .++++++++|
T Consensus        36 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~----~----~~~v~~~~sG  105 (406)
T PRK12381         36 QQGKEYIDFAGGIAVNALGH-AHPALREALNEQASKFWHTGNGYT-NEPVLRLAKKLIDAT----F----ADRVFFCNSG  105 (406)
T ss_pred             CCCCEEEEcCcCHhhccCCC-CCHHHHHHHHHHHhhcccccCccC-CHHHHHHHHHHHhhC----C----CCeEEEcCCc
Confidence            34888999988754444443 489999999999876311  1121 111234555555543    2    4699999999


Q ss_pred             HHHHHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCceeEe----eeccCC--CCccCCHHHHHhhhccCce
Q 014631          119 KQAIQVILTVLAR--------PGANILLPKPGFPLYEANARHTRLEIRH----FDLLPE--KGWEVDLDGLEALADENTV  184 (421)
Q Consensus       119 ~~al~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~--~~~~~d~e~l~~~~~~~~~  184 (421)
                      ++|+..+++....        ...+|+..+.+|++....+...+.....    .+..+.  ...-.|++++++.+.+++.
T Consensus       106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~a  185 (406)
T PRK12381        106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTC  185 (406)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCee
Confidence            9999999987521        3468999999999986555443322111    011110  0011378899988876665


Q ss_pred             EEEEeCCCCCccccc--CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          185 AMVIVNPGNPCGNVF--TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       185 ~i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++ +.+|.|++|-++  +.+.+++|.++|++||+++|+||+|.++.+.|... .....+....   +.||||.++ +|+|
T Consensus       186 av-iiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~~  259 (406)
T PRK12381        186 AV-IVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGFP  259 (406)
T ss_pred             EE-EEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCCc
Confidence            55 458988887544  68999999999999999999999999887777532 2222222222   348999975 7999


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC-CCccc
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI-PCITC  340 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~  340 (421)
                      +||++++        +++++.+.... ..+.+.+++.+.++.++|+...   -.+..++++++.+++.+.|+++ .....
T Consensus       260 ig~~~~~--------~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~  328 (406)
T PRK12381        260 IGAMLTT--------EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGL  328 (406)
T ss_pred             eEEEEEc--------HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            9999986        35777765533 2345778899999888876422   2245677778888888888764 11211


Q ss_pred             cC-CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          341 PR-KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       341 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +. ....|.++++.++....   .....+. ..+.++||.+.+..    ++.+|++++  .+++++++++++|.++++++
T Consensus       329 ~~~vrg~Gl~~~~~l~~~~~---~~~~~~~-~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~  400 (406)
T PRK12381        329 FSEIRGLGLLIGCVLNAEYA---GKAKQIS-QEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERF  400 (406)
T ss_pred             EEEEecCeEEEEEEecCchh---hHHHHHH-HHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence            11 22447788888764210   0123444 45677899997642    468999987  78999999999999999887


Q ss_pred             hhc
Q 014631          418 AKQ  420 (421)
Q Consensus       418 ~~~  420 (421)
                      .++
T Consensus       401 ~~~  403 (406)
T PRK12381        401 VSR  403 (406)
T ss_pred             Hhc
Confidence            654

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.96  E-value=7.9e-26  Score=214.24  Aligned_cols=319  Identities=21%  Similarity=0.271  Sum_probs=232.1

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC----CCCC----CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCC
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD----CYSP----SVGILPARRAIADYLNSELPCKLSP-DDVYLTAG  117 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~----~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g  117 (421)
                      |+|+.+.+.     +.|+.+.+++.+.+.+....    .+..    ...+.++|+.++++++      +++ ++|++++|
T Consensus         1 iYld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~~v~~~~~   69 (371)
T PF00266_consen    1 IYLDNAGTG-----PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDEEVVFTSN   69 (371)
T ss_dssp             EEEBTSSS------B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTEEEEEESS
T ss_pred             CEeeCCCcc-----CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Cccccccccccc
Confidence            456666655     67899999999987753211    1111    1124578888888883      566 89999999


Q ss_pred             HHHHHHHHHHHh---cCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631          118 CKQAIQVILTVL---ARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN  190 (421)
Q Consensus       118 ~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~  190 (421)
                      ++++++.++..+   .++||+|++.+..|++..    ...+..|.++..++.+.+  ..+|++++++.+++++++++++.
T Consensus        70 ~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~  147 (371)
T PF00266_consen   70 GTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISH  147 (371)
T ss_dssp             HHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEES
T ss_pred             cchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeec
Confidence            999999999999   789999999999998765    444577999999987643  35899999999999999999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      .+|.||+..|   +++|.++|+++|+++++|.+++.    |....++..++.+   ++++|.+|.+|.+|  +|++++++
T Consensus       148 ~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~----g~~~id~~~~~~D---~~~~s~~Kl~gp~G--~g~l~v~~  215 (371)
T PF00266_consen  148 VENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSA----GCVPIDLDELGAD---FLVFSSHKLGGPPG--LGFLYVRP  215 (371)
T ss_dssp             BETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTT----TTSS--TTTTTES---EEEEESTSTTSSST--EEEEEEEH
T ss_pred             ccccccEEee---eceehhhhhccCCceeEechhcc----ccccccccccccc---eeeecccccCCCCc--hhhheehh
Confidence            9999999965   88889999999999999999987    4444455554433   78889999544555  79999963


Q ss_pred             CCcchhHHHHHHHHhhhcc----------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631          271 PSGILQELRIVDSIKGYLN----------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC  328 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  328 (421)
                              ++.++++....                      ..++++.....++..+++...+.+++++.++..++.+++
T Consensus       216 --------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~  287 (371)
T PF00266_consen  216 --------EAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYL  287 (371)
T ss_dssp             --------HHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHH
Confidence                    44444421110                      123677777778888887655678888999999999999


Q ss_pred             HHHhhcCCCccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------CCCeEEEEe
Q 014631          329 YDRIKEIPCITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------MKNWLRITF  396 (421)
Q Consensus       329 ~~~l~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~iRi~~  396 (421)
                      .+.|++++++.+. .|    ..+..+.+.++..      +..++...| +++||.+..|..+.        ..+.+|+|+
T Consensus       288 ~~~l~~~~~~~~~-~~~~~~~~~~i~~~~~~~~------~~~~~~~~L-~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~  359 (371)
T PF00266_consen  288 REALEELPGIEVL-GPDDEPRRPSIVSFNLPGS------DADDVVKYL-EERGIAVSTGSACAGPSLDILGMGGVIRVSL  359 (371)
T ss_dssp             HHHHHHTTTEEES-SSSCGGBGTTEEEEEETTS------SHHHHHHHH-HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-
T ss_pred             HhhhhcCCceeEe-eecccccccceEEEeecCC------CHHHHHHHH-hhcCEEEeccCcccHHHHHHhCCCCEEEEec
Confidence            9999999887733 32    2233444555432      455555554 66699999987765        358999999


Q ss_pred             c--CCHHHHHHH
Q 014631          397 A--IEPSALEEG  406 (421)
Q Consensus       397 ~--~~~e~l~~~  406 (421)
                      +  ++.+|++++
T Consensus       360 ~~~nt~~dv~~l  371 (371)
T PF00266_consen  360 HYYNTEEDVDRL  371 (371)
T ss_dssp             GTTSSHHHHHHH
T ss_pred             cCCCCHHHHhhC
Confidence            8  899999875

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PLN02651 cysteine desulfurase

Probab=99.96  E-value=2.1e-26  Score=217.39  Aligned_cols=322  Identities=14%  Similarity=0.137  Sum_probs=220.2

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ++|+.+.++     +.++.+.+++.+.+.....+.      +..  ..-+.++|+.+++++      +.++++|++|+|+
T Consensus         1 iYld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~   69 (364)
T PLN02651          1 LYLDMQATT-----PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGA   69 (364)
T ss_pred             CcccCcCCC-----CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence            356666655     678899999988875421110      000  111456677777776      3567899999999


Q ss_pred             HHHHHHHHHHh----cCCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631          119 KQAIQVILTVL----ARPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       119 ~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      +++++.++..+    .++||+|++....|+++...+   ...|.+++.++.++  ++.+|++++++.+++++++++++++
T Consensus        70 t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~v~~~  147 (364)
T PLN02651         70 TESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS--DGLVDLDELAAAIRPDTALVSVMAV  147 (364)
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEECC
Confidence            99988887654    468999999998887754433   35688888888753  4568999999999989999999999


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      +|+||...|   +++|.++|+++|+++++|.+++.    |.....+..++.+   +++.|.+|+++.+|  +|+++++++
T Consensus       148 ~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~----g~~~~~~~~~~~D---~~~~s~hK~~gp~G--~g~l~v~~~  215 (364)
T PLN02651        148 NNEIGVIQP---VEEIGELCREKKVLFHTDAAQAV----GKIPVDVDDLGVD---LMSISGHKIYGPKG--VGALYVRRR  215 (364)
T ss_pred             CCCceeccc---HHHHHHHHHHcCCEEEEEcchhh----CCcccCcccCCCC---EEEechhhhCCCCc--eEEEEEcCC
Confidence            999999955   88999999999999999999986    3333344444433   77889999744334  899998753


Q ss_pred             CcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCC---Cc-
Q 014631          272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKP---EG-  346 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~---~~-  346 (421)
                      ....-.+.+...-.......++++.....++.++++... ...+++.++.+++.+++.+.|++ +|++.+. .|   .. 
T Consensus       216 ~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~-~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~-~~~~~~~~  293 (364)
T PLN02651        216 PRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAM-KEMDYDEKHMKALRERLLNGLRAKLGGVRVN-GPRDPEKR  293 (364)
T ss_pred             CCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEE-CCCCcccC
Confidence            110000001000000111245788888888888887533 34577888999999999999985 6788744 43   11 


Q ss_pred             -eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHH
Q 014631          347 -SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALE  404 (421)
Q Consensus       347 -~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~  404 (421)
                       ...+.+.++.      .++.++...| .+  |.+..|+.+..                   .+.+|+|++  +|++||+
T Consensus       294 ~~~i~~~~~~~------~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        294 YPGTLNLSFAY------VEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             cCCEEEEEeCC------CCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence             2244444442      1456666665 43  99988876522                   268999998  7888874

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.96  E-value=4.2e-26  Score=216.04  Aligned_cols=337  Identities=14%  Similarity=0.141  Sum_probs=218.5

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHHhc-------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           48 PLGHGDPSAFPCFRTTPVAADAVVDAVRS-------AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ||+..+   |.++..+|.++++..+++++       +.. .|+...++.+|++.+|++++.       ++.+++++|.++
T Consensus         2 ~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~a   70 (392)
T PLN03227          2 NFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAST   70 (392)
T ss_pred             CCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHHH
Confidence            455554   55677889999999999876       222 466666789999999999842       456777777666


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-----------cCceEEEEe
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-----------ENTVAMVIV  189 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-----------~~~~~i~~~  189 (421)
                      +. .++.++.++||.|+++++.|.++...+...+.+++++++.+.    -+++.+.+.+.           ++++.|++.
T Consensus        71 ~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E  145 (392)
T PLN03227         71 TS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVE  145 (392)
T ss_pred             HH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence            65 666678899999999999999998888878888777765311    13344433332           356777788


Q ss_pred             CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCC-CCCEEEEcccccccCCCCceEEEE
Q 014631          190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWL  266 (421)
Q Consensus       190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~  266 (421)
                      +++||+|.+.+   ++++.++|++||+++|+||+|+....+  |..........+ .+..+++.|+||.++..|   |++
T Consensus       146 ~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g---g~v  219 (392)
T PLN03227        146 GLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG---GMT  219 (392)
T ss_pred             CCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---cEE
Confidence            88999999977   778999999999999999999833222  222211111211 223577889999875444   888


Q ss_pred             EeeCCCcchhHHHHHHHHhhhc-c--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--CCccc-
Q 014631          267 VTSDPSGILQELRIVDSIKGYL-N--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--PCITC-  340 (421)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~-  340 (421)
                      +++        +++++.+.... .  +..+.++..+.++.+++....+  .+++.++++++.+++.+.|++.  |.+.. 
T Consensus       220 ~~~--------~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  289 (392)
T PLN03227        220 VGS--------EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKL  289 (392)
T ss_pred             ecC--------HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            775        34555554322 1  2222345566666555543111  2456777888888888888742  21110 


Q ss_pred             -----cCCCCceeEEEEecCcccccC-CC---ChHHHHHHHHhhcCeeEEeCC-------CCCCCCeEEEEec--CCHHH
Q 014631          341 -----PRKPEGSMFVMVKLNLSLLEG-IS---DDMEFALQLAKEESVIVLPGM-------AVGMKNWLRITFA--IEPSA  402 (421)
Q Consensus       341 -----~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~ll~~~gv~v~~g~-------~~~~~~~iRi~~~--~~~e~  402 (421)
                           ......++++.+.+....... ..   ...++... +.++|+.+.+..       .+-++..+|++++  +++||
T Consensus       290 rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~ee  368 (392)
T PLN03227        290 RNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHH-SLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTRED  368 (392)
T ss_pred             ccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHH-HHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHH
Confidence                 001223556666664321000 00   01245544 467799986521       1233567999997  89999


Q ss_pred             HHHHHHHHHHHHHHh
Q 014631          403 LEEGLGRIKAFCQRH  417 (421)
Q Consensus       403 l~~~~~~l~~~~~~~  417 (421)
                      ++++++.|++++++.
T Consensus       369 i~~~~~~l~~~~~~~  383 (392)
T PLN03227        369 IDKLLTVLGEAVEAI  383 (392)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998775

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.96  E-value=3.1e-26  Score=220.46  Aligned_cols=344  Identities=15%  Similarity=0.132  Sum_probs=228.0

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|+.++||..|......+ ..+|.+.+++.+++.+..  .|. +..+..+|++++++++.       ..+++++++||+
T Consensus        45 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGs  114 (423)
T TIGR00713        45 VDGNEYIDYVLSWGPLILG-HAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVP-------SVEMVRFVNSGT  114 (423)
T ss_pred             CCCCEEEEccccccccccC-CCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHH
Confidence            3589999999887654332 578999999999998753  343 55567899999999872       136899999999


Q ss_pred             HHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhh---cCceeEeeeccCC-------CCcc---CCHHHHHhhhc---c
Q 014631          120 QAIQVILTVLA--RPGANILLPKPGFPLYEANARH---TRLEIRHFDLLPE-------KGWE---VDLDGLEALAD---E  181 (421)
Q Consensus       120 ~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~-------~~~~---~d~e~l~~~~~---~  181 (421)
                      +|+..+++...  ...++|+..+++|+++...+..   .+......+..+.       +...   -|++++++.+.   +
T Consensus       115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~  194 (423)
T TIGR00713       115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE  194 (423)
T ss_pred             HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence            99999988643  2448999999999997543332   1111111111000       0000   17889988775   4


Q ss_pred             CceEEEEe-CCCCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631          182 NTVAMVIV-NPGNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       182 ~~~~i~~~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  259 (421)
                      +++++++. .++| +|.+.+ .+.+++|.++|++||+++|+||+|.++.+ |... ....++...+   +.+|||.++ +
T Consensus       195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~-g~~~-~~~~~~~~pD---i~t~sK~l~-~  267 (423)
T TIGR00713       195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV-ALGG-AQEYFGVEPD---LTTLGKIIG-G  267 (423)
T ss_pred             cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc-Ccch-hHHHhCCCcc---hhhhhhhhc-C
Confidence            55666554 5567 788877 58899999999999999999999998843 3221 1111222222   337999986 8


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |+|+||++++        +++++.+...    ...+.+.+++.+.++.++|+... ....++.++..+.+++.+.+.+++
T Consensus       268 G~pig~v~~~--------~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  339 (423)
T TIGR00713       268 GLPVGAFGGR--------REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLED  339 (423)
T ss_pred             CCceeeeeEH--------HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999995        4677777532    12345788999999888887533 235667777777777777777777


Q ss_pred             CCCccccCCCCceeEEEEecCcccccC-----CCCh---HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEG-----ISDD---MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG  406 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~  406 (421)
                      . ++.....+.+. ++.+.+.......     ..+.   ..+...+ .++||.+.++ .+   +.+|+++..++++++++
T Consensus       340 ~-~~~~~v~~~g~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~-~~---~~~~l~~~~t~~~i~~~  412 (423)
T TIGR00713       340 T-GIPHTVNRVGS-MFSLFFTEEEVTNYADAKKSDTELFAKFFHEM-LDKGVFLPPS-QF---EACFLSAAHTEEDIENT  412 (423)
T ss_pred             c-CCCeEEEeecc-EEEEEEecCCCCChhhhhcccHHHHHHHHHHH-HHCCeEEecC-Cc---cceeeECCCCHHHHHHH
Confidence            6 44311123333 3334343211000     0011   2355555 4689998754 22   45899988999999999


Q ss_pred             HHHHHHHHHH
Q 014631          407 LGRIKAFCQR  416 (421)
Q Consensus       407 ~~~l~~~~~~  416 (421)
                      +++|.+++++
T Consensus       413 ~~~l~~~l~~  422 (423)
T TIGR00713       413 IEAAEEVFAE  422 (423)
T ss_pred             HHHHHHHHhh
Confidence            9999999865

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.96  E-value=9.5e-26  Score=213.62  Aligned_cols=323  Identities=16%  Similarity=0.144  Sum_probs=222.3

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK  140 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~  140 (421)
                      +.++.+.+++.+.+ .+....|.  ..+.++++.++++++    ...+.+.|++++|++++++.++..+..+||.|++..
T Consensus        15 ~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~----~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~   87 (368)
T PRK13479         15 TTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIAT----GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPD   87 (368)
T ss_pred             CCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhC----CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence            56677777776654 21111122  235677777777763    122235688999999999999999999999999998


Q ss_pred             CCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631          141 PGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI  216 (421)
Q Consensus       141 p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~  216 (421)
                      ++|++.  ...++..|.+++.++.+.  ++.+|++++++.+++  +++.+++++|+||||...|   +++|.++|+++|+
T Consensus        88 ~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~  162 (368)
T PRK13479         88 NGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHGK  162 (368)
T ss_pred             CCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcCC
Confidence            888765  377788999999998753  345899999998754  4567889999999999966   7788899999999


Q ss_pred             EEEEcccccccccCCCCcccccccCCCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-------
Q 014631          217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-------  288 (421)
Q Consensus       217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-------  288 (421)
                      ++|+|++++.    |....++..++.   .+++.|++|++ +.+|  +||+++++        ++.+.+....       
T Consensus       163 ~livDa~~~~----g~~~~~~~~~~~---d~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~~~~  225 (368)
T PRK13479        163 RLIVDAMSSF----GAIPIDIAELGI---DALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLSLDL  225 (368)
T ss_pred             EEEEEccccc----CCccccccccCc---eEEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCeeecH
Confidence            9999977644    222233333333   26678999975 4567  69999963        3444433221       


Q ss_pred             -----------ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEEec
Q 014631          289 -----------NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMVKL  354 (421)
Q Consensus       289 -----------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~  354 (421)
                                 ...++++...+.++.+++.... ..++++..++++++++.+.+.|+++ |+.++..+.  .+....+.+
T Consensus       226 ~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~  304 (368)
T PRK13479        226 YDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHA  304 (368)
T ss_pred             HHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEEC
Confidence                       1112566666666666665422 3456788889999999999999988 776332211  111122233


Q ss_pred             CcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c-CCHHHHHHHHHHHHHHHHHhh
Q 014631          355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A-IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~-~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +...   ..+..++...+ .++||.+.+|..+ ..+++|++. + +++++++++++.|++++.++.
T Consensus       305 ~~~~---~~~~~~l~~~L-~~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~  365 (368)
T PRK13479        305 PADP---AYDFKEFYERL-KEQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG  365 (368)
T ss_pred             CCCC---CcCHHHHHHHH-HHCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            3210   01345666665 6679999988644 246899986 4 799999999999999988764

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.96  E-value=3.4e-25  Score=210.43  Aligned_cols=340  Identities=17%  Similarity=0.173  Sum_probs=224.6

Q ss_pred             HHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCC-CCCHHHHHHHHHHHhhhCC
Q 014631           28 RSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPS-VGILPARRAIADYLNSELP  104 (421)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~-~g~~~l~~~ia~~l~~~~~  104 (421)
                      .++.+.+...+....++.+.+++..         +.+.+.+++.+.....  ....|+.. .-..++++.+++++    |
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g   73 (373)
T TIGR03812         7 EELKEYRSEDLKYSDGRILGSMCTN---------PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL----H   73 (373)
T ss_pred             HHHHHHHhcCCCCCCCcEEEEEeCC---------chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh----C
Confidence            3455555555544334444444432         2344566666665432  12223211 11234555555555    3


Q ss_pred             CCCCCCcEEEcCCHHHHHHHHHHHhc------CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631          105 CKLSPDDVYLTAGCKQAIQVILTVLA------RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus       105 ~~~~~~~i~~~~g~~~al~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                        ++++++++++|+++++..++.++.      ++||+|++++++|.++...++..|++++.++.+.  ++.+|++++++.
T Consensus        74 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~  149 (373)
T TIGR03812        74 --LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDE--DYTVDVKDVEDL  149 (373)
T ss_pred             --CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCC--CCCcCHHHHHHH
Confidence              556788889999999888776653      4679999999999999999999999999998753  456899999999


Q ss_pred             hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC----CCC--cccccccCCCCCEEEEccc
Q 014631          179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG----STP--YVRMGVFGSTVPVITLGSM  252 (421)
Q Consensus       179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~----~~~--~~~~~~~~~~~~~i~~~s~  252 (421)
                      +.+++..++++.|+||||..   .++++|.++|+++|+++|+|++|+.+...    |..  ...+.....   ..+..|.
T Consensus       150 l~~~~~~vv~~~~~~~tG~~---~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~---d~~~~s~  223 (373)
T TIGR03812       150 IDDNTIGIVGIAGTTELGQI---DDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV---QSITIDP  223 (373)
T ss_pred             HhhCcEEEEEECCCCCCCcc---CCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC---CEEEECc
Confidence            88777666666789999999   45888889999999999999999865321    001  111111111   1334578


Q ss_pred             ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc---------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631          253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI---------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD  323 (421)
Q Consensus       253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  323 (421)
                      +|+ +.++.++|+++..+       +++.+.+......         .++.+.....++..+++...+.++++..++..+
T Consensus       224 ~K~-~~~~~~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~  295 (373)
T TIGR03812       224 HKM-GLSPIPAGGILFRS-------KSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECME  295 (373)
T ss_pred             ccc-CCCcCCceEEEEeC-------HHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            895 77778888777643       2344544321111         123445566666677765456778888999999


Q ss_pred             HHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHH
Q 014631          324 TADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPS  401 (421)
Q Consensus       324 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e  401 (421)
                      +++++++.|+++ ++..+..|. ..++.+.++        +..++...| .++||.+.++.   .++++|++++  ++++
T Consensus       296 ~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~--------~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~e  361 (373)
T TIGR03812       296 NTRYLVEELKKI-GFEPVIEPV-LNIVAFEVD--------DPEEVRKKL-RDRGWYVSVTR---CPKALRIVVMPHVTRE  361 (373)
T ss_pred             HHHHHHHHHHhC-CCeEEcCCC-ceEEEEEeC--------CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHH
Confidence            999999999988 554232333 445555554        234566555 56799997653   3578999998  7899


Q ss_pred             HHHHHHHHHHH
Q 014631          402 ALEEGLGRIKA  412 (421)
Q Consensus       402 ~l~~~~~~l~~  412 (421)
                      +++++++.|++
T Consensus       362 did~l~~~L~~  372 (373)
T TIGR03812       362 HIEEFLEDLKE  372 (373)
T ss_pred             HHHHHHHHHhh
Confidence            99999999875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.95  E-value=9.4e-26  Score=216.47  Aligned_cols=354  Identities=15%  Similarity=0.154  Sum_probs=228.6

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|......+ ..+|.+.+++.+++++... .+.+..+.+ ....+++++....+.+. .++++++++|++
T Consensus        38 ~dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGse  113 (425)
T PRK08088         38 VEGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGSE  113 (425)
T ss_pred             CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcHH
Confidence            3588899998886654333 4689999999999987432 222222223 34477777766554222 147788888888


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeE--------------e--eeccCCCCccC--CHHHHHhhhc
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIR--------------H--FDLLPEKGWEV--DLDGLEALAD  180 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~--------------~--~~~~~~~~~~~--d~e~l~~~~~  180 (421)
                      |+..+++...  .....|+..+++|++....+...+....              .  +|.+. ++...  +++++++.+.
T Consensus       114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~  192 (425)
T PRK08088        114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFK  192 (425)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHH
Confidence            8887776543  1234677779999998766555433211              0  11111 11001  1455777664


Q ss_pred             ----cCceEEEEeCC--CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          181 ----ENTVAMVIVNP--GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       181 ----~~~~~i~~~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                          ++..+.++..|  ++++...++++.+++|.++|++||+++|+||+|+++.+.|... .+...+   ....+.||||
T Consensus       193 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~---~~pdi~s~sK  268 (425)
T PRK08088        193 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMG---VAADLTTFAK  268 (425)
T ss_pred             hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcC---CCCCEEEEec
Confidence                23344566677  5666677899999999999999999999999999876655422 221222   1234679999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l  332 (421)
                      .++ +|+|+||++++        .++++.+..... .+.+.+++.|.++.++|+... +..+++.++..+.+++.+.+.+
T Consensus       269 ~l~-~G~rig~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~  339 (425)
T PRK08088        269 SIA-GGFPLAGVTGR--------AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIA  339 (425)
T ss_pred             ccc-CCCcceeeEec--------HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            975 89999999996        357777655432 355788899999999997643 3445555555555555555544


Q ss_pred             hcCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631          333 KEIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~  407 (421)
                      .+.|.+..+ .+. |+++|+.+.....   +.......+... +.++||.+.|+..+  .+.+|++++  .+++++++++
T Consensus       340 ~~~~~~~~v-~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~-~~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i  414 (425)
T PRK08088        340 EKHPEIGDV-RGL-GAMIAIELFEDGDHSKPNAKLTAQIVAR-ARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGL  414 (425)
T ss_pred             HhCCCeEEE-ecc-ceEEEEEEecCCCCCCCCHHHHHHHHHH-HHhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHH
Confidence            555554323 223 8889999843210   000113455554 46679998876544  478999998  6799999999


Q ss_pred             HHHHHHHHHh
Q 014631          408 GRIKAFCQRH  417 (421)
Q Consensus       408 ~~l~~~~~~~  417 (421)
                      ++|.+++.+.
T Consensus       415 ~~l~~~l~~~  424 (425)
T PRK08088        415 EIIAQCFDEA  424 (425)
T ss_pred             HHHHHHHHhh
Confidence            9999998754

>PLN00144 acetylornithine transaminase

Probab=99.95  E-value=1.6e-25  Score=211.41  Aligned_cols=342  Identities=14%  Similarity=0.128  Sum_probs=222.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|.-.... ...+|.+.+++.+++++...  +.. ....+....+++.+.+..    ..+.++++++|++
T Consensus        12 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse   83 (382)
T PLN00144         12 VEGKEYLDMAAGIAVNAL-GHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE   83 (382)
T ss_pred             CCCCEEEECCcCHHhccC-CCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence            358899999877533222 25689999999999986321  111 112344455555554422    2468999999999


Q ss_pred             HHHHHHHHhc---C------C------CCeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCCc--cCCHHHHHhhh
Q 014631          121 AIQVILTVLA---R------P------GANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKGW--EVDLDGLEALA  179 (421)
Q Consensus       121 al~~~~~~l~---~------~------gd~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~--~~d~e~l~~~~  179 (421)
                      |+..+++...   .      +      ..+|+....+|++....+........    +.+..+...+  --|++.+++.+
T Consensus        84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~  163 (382)
T PLN00144         84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI  163 (382)
T ss_pred             HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence            9999988642   1      0      25799999999998655554332210    0111110000  01688998877


Q ss_pred             ccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-ccccCCCCCEEEEccccccc
Q 014631          180 DENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       180 ~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~  256 (421)
                      ..+..+.+++.| +||.|+. ++.+.+++|.++|++||+++|+||+|+++.+.|..+.. +..+.++     +.||||.+
T Consensus       164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l  238 (382)
T PLN00144        164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL  238 (382)
T ss_pred             CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc
Confidence            544444555666 7885543 34555999999999999999999999998877753221 3334433     55899995


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHhhc
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFF-SKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~  334 (421)
                       .+|+|+|+++++        +++++.+.... ..+.+.+++.+.++.+.|+...+..+ +...+.-+..++.+.+.+.+
T Consensus       239 -~~G~pig~v~~~--------~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~  309 (382)
T PLN00144        239 -AGGLPIGAVLVT--------EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGG  309 (382)
T ss_pred             -cCCcceEEEEEc--------HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhh
Confidence             678999999996        35666665432 23557888999988876654332222 22222223334445555555


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      .|.+..+ .. .|+++|++++.       ....++.. +.++||.+.|+..   .+.+|++++  .+++++++++++|.+
T Consensus       310 ~~~~~~v-rg-~G~~~~l~l~~-------~~~~~~~~-~~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~  376 (382)
T PLN00144        310 NPHVKEV-RG-VGLLVGIQLDV-------PAGPLVDA-CRDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILAD  376 (382)
T ss_pred             CCCceee-ec-CceEEEEEecC-------ccHHHHHH-HHHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHH
Confidence            5544323 23 78999999842       23456554 5678999998732   488999998  679999999999999


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      ++.++
T Consensus       377 ~l~~~  381 (382)
T PLN00144        377 CLPAL  381 (382)
T ss_pred             HHHhc
Confidence            98764

>PRK07049 methionine gamma-lyase; Validated

Probab=99.95  E-value=1.9e-25  Score=212.91  Aligned_cols=229  Identities=13%  Similarity=0.127  Sum_probs=173.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCc
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRL  155 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~  155 (421)
                      .+|+. .....|++.+|++.+        .+++++++||++|+..++.+++++||+|++++|.|.++...+    ...|+
T Consensus        78 ~R~~~-Pt~~~Le~~lA~leg--------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi  148 (427)
T PRK07049         78 SRFNH-PNSEIVEDRLAVYEG--------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV  148 (427)
T ss_pred             cCCCC-cCHHHHHHHHHHHhC--------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence            45543 346899999999973        457888899999999999999999999999999999986653    45688


Q ss_pred             eeEeeeccCCCCccCCHHHHHhhhc-----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHh---cCcEEEEccccccc
Q 014631          156 EIRHFDLLPEKGWEVDLDGLEALAD-----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK---LGIMVISDEVYDHL  227 (421)
Q Consensus       156 ~~~~~~~~~~~~~~~d~e~l~~~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~De~~~~~  227 (421)
                      +++.++.      ..|++++++.+.     +++++|++++|+||||.+++.+++.+|++.|+.   +++++|+|++|...
T Consensus       149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~  222 (427)
T PRK07049        149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP  222 (427)
T ss_pred             EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence            7666641      146677766553     468999999999999999999999999988654   68999999998653


Q ss_pred             ccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHH
Q 014631          228 TFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQI  305 (421)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  305 (421)
                      ..    ..++ ..   +..+++.|+||.++ .+|+|+||++++        +++.+.+...... ..+.+++.+.++...
T Consensus       223 ~~----~~pl-~~---g~divv~S~SK~~gG~~glr~G~vv~~--------~~l~~~l~~~~~~~g~~ls~~~a~l~~r~  286 (427)
T PRK07049        223 VF----QKPL-EH---GADLSVYSLTKYVGGHSDLVAGAVLGR--------KALIRQVRALRSAIGTQLDPHSCWMLGRS  286 (427)
T ss_pred             cc----CCcc-cc---CCCEEEEcCceeecCCCCcEEEEEECC--------HHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence            32    1122 11   23488889999999 599999999975        3566666655432 345777888877666


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          306 FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       306 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      |+.     +..+.++..++++.+.+.|+++|++..+..|
T Consensus       287 L~t-----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp  320 (427)
T PRK07049        287 LET-----LVLRMERANRNARAVAEFLRDHPKVEKLHYL  320 (427)
T ss_pred             CCh-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            642     5555667789999999999998887644444

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.95  E-value=3.6e-25  Score=211.83  Aligned_cols=332  Identities=14%  Similarity=0.130  Sum_probs=223.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      .|.+++||..|..... ....+|.+.+++.+++++.... .+.......++++.++++.    |    .+.++++++|++
T Consensus        39 ~g~~~lD~~~~~~~~~-~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~  109 (401)
T PRK00854         39 DGNRYLDCLSAYSAVN-QGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT----G----SHKVLPMNSGAE  109 (401)
T ss_pred             CCCEEEEcCcchhhcc-CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC----C----CCEEEEeCCcHH
Confidence            4788999877753322 1245899999999999874221 1112223456777777764    2    358999999999


Q ss_pred             HHHHHHHHhcC---------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHh
Q 014631          121 AIQVILTVLAR---------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus       121 al~~~~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      |+..+++.+..         +| ++|++...+|++....+...+..             +..++.       .|++++++
T Consensus       110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~  182 (401)
T PRK00854        110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALEA  182 (401)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHHH
Confidence            99999988742         24 68888888888865444332221             122211       37899999


Q ss_pred             hhccCceEEEEeCCCCCcccccCH-HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTY-QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      .+.+++++|++.+|+||+|.++++ +.+++|.++|++||+++|+||+|+++.+.|... .....+....++ +  ++|++
T Consensus       183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D~~-~--~~K~l  258 (401)
T PRK00854        183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEADVT-L--IGKAL  258 (401)
T ss_pred             HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCCEE-E--ecccc
Confidence            998889999999999999999874 569999999999999999999999776655322 111112111223 2  47998


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +...+|+|+++++        +++++.+.... ..+.+.+++.+.++.++|+...+   .+..+.++++.+++.+.|+++
T Consensus       259 ~gg~~~ig~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~  327 (401)
T PRK00854        259 SGGFYPVSAVLSN--------SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSI  327 (401)
T ss_pred             cCCccCeEEEEEc--------HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhh
Confidence            6544799999986        35666665332 22346788889998888864221   235677788888888888876


Q ss_pred             CCcccc--CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631          336 PCITCP--RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK  411 (421)
Q Consensus       336 ~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~  411 (421)
                       +...+  ..+. |.++.+.+....    .+..+++..| .++||.+.+..    .+++|++++  +++++|++++++|+
T Consensus       328 -~~~~~~~~~g~-g~~~~i~~~~~~----~~~~~~~~~L-~~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l~  396 (401)
T PRK00854        328 -RSNIVREVRGR-GLMLAVELEPEA----GGARQYCEAL-KERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQIA  396 (401)
T ss_pred             -ccCceEEEecc-ceEEEEEEecCc----hhHHHHHHHH-HHCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHHH
Confidence             22211  1233 444444442210    1345677666 45799997532    479999986  79999999999999


Q ss_pred             HHHH
Q 014631          412 AFCQ  415 (421)
Q Consensus       412 ~~~~  415 (421)
                      +++.
T Consensus       397 ~~l~  400 (401)
T PRK00854        397 KVLA  400 (401)
T ss_pred             HHhh
Confidence            8863

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.95  E-value=7.4e-25  Score=207.61  Aligned_cols=333  Identities=13%  Similarity=0.138  Sum_probs=228.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~  120 (421)
                      .|+.++||..|.-..  +++.+|.+++++.+++....  .+. .....++++.+++.+..      .++ .+++++++++
T Consensus        27 dg~~~lD~~s~~~~~--~lG~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~------~~~~~~~~~~SGse   95 (375)
T PRK04260         27 DGKKYLDFSSGIGVT--NLGFHPQVQQALQKQAGLIW--HSP-NLYLNSLQEEVAQKLIG------DKDYLAFFCNSGAE   95 (375)
T ss_pred             CCCEEEECCCCcccc--cCCCCHHHHHHHHHHHHhcC--ccc-CccCCHHHHHHHHHHhc------CcCCEEEEcCccHH
Confidence            488899998774332  23347889999999987632  222 23356888999987742      233 4689999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchHH-HHhhcCceeEe------eeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYEA-NARHTRLEIRH------FDLLPEKGWEVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~-~~~~~g~~~~~------~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      |+..+++...  ..+++|++.+.+|++... .....|.+...      ++...... -.|++.+++.+.+++.++++..+
T Consensus        96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dl~~l~~~l~~~~a~vi~e~v  174 (375)
T PRK04260         96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI-FNDLNSVKALVNKNTAAVMLELV  174 (375)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC-CCCHHHHHHhcCCCeEEEEECCe
Confidence            9998887763  345789999999987532 22222221100      00000000 13788999888767777777888


Q ss_pred             CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          192 GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       192 ~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      +|++|... +.+.++++.++|+++|+++|+||+|.++.+.|... .....+...+   +.||||.++ +|+|+||++++ 
T Consensus       175 ~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~-  248 (375)
T PRK04260        175 QGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAK-  248 (375)
T ss_pred             ECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEeccccc-CCcceEEEEEc-
Confidence            99999874 46789999999999999999999999876655432 2112222222   338999964 78999999996 


Q ss_pred             CCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631          271 PSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM  348 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  348 (421)
                             +++.+.+.... ..+.+.+++.+.++.++|+... +...++.++..+..++.+.+.+.+.+.+..+  +..|+
T Consensus       249 -------~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~g~  319 (375)
T PRK04260        249 -------SSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV--RGLGY  319 (375)
T ss_pred             -------HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE--eccce
Confidence                   35666665432 2345678889999988887633 4556666777777777777777766433312  34688


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      ++|++++.       +...+...+ .++||.+.|+.    .+.+|++++  .+++++++++++|+++
T Consensus       320 ~~~~~~~~-------~~~~~~~~l-~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        320 MIGIETTA-------DLSQLVEAA-RDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV  374 (375)
T ss_pred             EEEEEecC-------cHHHHHHHH-HhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence            99998842       345666554 67899998752    378999996  7899999999999875

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.95  E-value=1.3e-24  Score=208.23  Aligned_cols=345  Identities=14%  Similarity=0.145  Sum_probs=219.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|.+++||..|...... ...+|.+.+++.++++.... .....  ..+..+.+.+.+.+..+    .+.++++++|++|
T Consensus        29 dg~~~lD~~~~~~~~~~-Gh~~p~v~~a~~~~~~~~~~-~~~~~--~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A  100 (400)
T PTZ00125         29 EGKKYYDFLSAYSAVNQ-GHCHPKILAALINQAQKLTL-TSRAF--YNDVLGLAEKYITDLFG----YDKVLPMNSGAEA  100 (400)
T ss_pred             CCCEEEEcccCHhhccC-CcCCHHHHHHHHHHHHhccc-ccccc--cCHHHHHHHHHHHhCCC----CCEEEEeCCcHHH
Confidence            47889999877543221 24688999999999876321 11111  12333444444443222    3588999999999


Q ss_pred             HHHHHHHhcC----------CCCeEEEcCCCCcchHHHHhhcCceeEe----eeccCC--CCccCCHHHHHhhhc-cCce
Q 014631          122 IQVILTVLAR----------PGANILLPKPGFPLYEANARHTRLEIRH----FDLLPE--KGWEVDLDGLEALAD-ENTV  184 (421)
Q Consensus       122 l~~~~~~l~~----------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~--~~~~~d~e~l~~~~~-~~~~  184 (421)
                      +..+++.+.+          .+++|++.+.+|++........+.....    .+..+.  .-.-.|++++++.+. ++++
T Consensus       101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  180 (400)
T PTZ00125        101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVA  180 (400)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeE
Confidence            9999987631          3478999999998865443322211100    010000  000127899999885 5677


Q ss_pred             EEEEeCCCCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631          185 AMVIVNPGNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL  263 (421)
Q Consensus       185 ~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  263 (421)
                      ++++..++||||.+++ .+.+++|.++|++||+++|+||+|+++.+.|..+ .....+....++   ++||.++.+++|+
T Consensus       181 ~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~~~~~~~~pd~~---~~sK~l~~g~~~i  256 (400)
T PTZ00125        181 AFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-AHDHEGVKPDIV---LLGKALSGGLYPI  256 (400)
T ss_pred             EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-HHHhcCCCCCEE---EEcccccCCCcCc
Confidence            7777777999999886 4569999999999999999999998876666432 111122111222   5789986555699


Q ss_pred             EEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc----CCCc
Q 014631          264 GWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE----IPCI  338 (421)
Q Consensus       264 G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g~  338 (421)
                      ||++++        +++.+.+.... ..+.+.+++.+.++.++++...+..   ..++.+++.+.+.+.|++    .+.+
T Consensus       257 g~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~  325 (400)
T PTZ00125        257 SAVLAN--------DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKKSPWV  325 (400)
T ss_pred             EEEEEc--------HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence            999986        35667665432 2344677888888877776422222   233444445555555544    2333


Q ss_pred             cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                      ..+ .+ .|.+.++.++...   .....++...+ .++||.+.|+.    .+++|++++  .+++++++++++|.+++++
T Consensus       326 ~~~-~~-~g~~~~v~~~~~~---~~~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~  395 (400)
T PTZ00125        326 KEI-RG-KGLLNAIVFDHSD---GVNAWDLCLKL-KENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLKS  395 (400)
T ss_pred             EEE-ec-ccEEEEEEEccCc---chHHHHHHHHH-HHCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence            212 33 4677777776311   11345666666 46799998863    478999976  8999999999999999988


Q ss_pred             hhh
Q 014631          417 HAK  419 (421)
Q Consensus       417 ~~~  419 (421)
                      +..
T Consensus       396 ~~~  398 (400)
T PTZ00125        396 FDS  398 (400)
T ss_pred             Hhc
Confidence            743

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.95  E-value=4.9e-25  Score=198.59  Aligned_cols=342  Identities=17%  Similarity=0.240  Sum_probs=234.4

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .+|++|+||..|-..... ...+|.+.+++.+++++-  ..+.|.     .+.+..+++.+.+..  + ..+.++++++|
T Consensus        39 ~~G~~YlDf~~Giav~~l-GH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s--~-~~d~vff~NSG  109 (404)
T COG4992          39 QQGREYLDFAAGIAVNNL-GHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELS--P-FADRVFFCNSG  109 (404)
T ss_pred             CCCCEeeeeccceeeecc-CCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhC--c-cccEEEEcCCc
Confidence            459999999888655333 368999999999998862  222332     233444444443311  2 37899999999


Q ss_pred             HHHHHHHHHHhcC----CC-CeEEEcCCCCcchHHHHhhcCceeEee----eccCCC---CccCCHHHHHhhhccCceEE
Q 014631          119 KQAIQVILTVLAR----PG-ANILLPKPGFPLYEANARHTRLEIRHF----DLLPEK---GWEVDLDGLEALADENTVAM  186 (421)
Q Consensus       119 ~~al~~~~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~----~~~~~~---~~~~d~e~l~~~~~~~~~~i  186 (421)
                      +||++.+++...+    ++ .+|+....+|++-...+...+.+..+.    |+.+.-   .|+ |++++++++++++.+|
T Consensus       110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~al~~ai~~~taAv  188 (404)
T COG4992         110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEALEAAIDEDTAAV  188 (404)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHHHHHHhccCeEEE
Confidence            9999999987532    22 488899999988655555444443221    221110   122 8999999999988888


Q ss_pred             EEeCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          187 VIVNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       187 ~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      ++-..+...|++. +++.++++.++|++||+++|.||+|+++.++|.-+ ....++...+++   ++.|.+ ..|+++|.
T Consensus       189 ivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f-A~e~~gV~PDI~---tlaK~L-gGG~PigA  263 (404)
T COG4992         189 IVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF-AYEHYGVEPDIL---TLAKAL-GGGFPIGA  263 (404)
T ss_pred             EEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH-HHHHhCCCCCEE---Eeeccc-cCCcccee
Confidence            7666688899875 55779999999999999999999999999888743 333333333344   678996 56799999


Q ss_pred             EEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC----CCccc
Q 014631          266 LVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI----PCITC  340 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~  340 (421)
                      +++++        .+.+.+..... .+++.|+++++++.++++...++   +..++.+++.+++.+.|.++    |-+..
T Consensus       264 ~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e---~ll~~v~~~g~~~~~~L~~l~~~~~~v~~  332 (404)
T COG4992         264 MLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEE---GLLENVREKGEYLLQRLRELKRRYPLVKE  332 (404)
T ss_pred             eEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcch---hHHHHHHHHHHHHHHHHHHHhhcCCceee
Confidence            99852        23444544433 46789999999999998764432   33334445555555555543    32221


Q ss_pred             cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                        -..-|+++.+++....     ...+++.. ++++||.+.+..    ++.+|+.++  .++|++++++++|++++....
T Consensus       333 --vRG~GLmiGiel~~~~-----~a~~~~~~-~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~  400 (404)
T COG4992         333 --VRGRGLMIGIELKEPY-----RARDIVRA-LREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAAS  400 (404)
T ss_pred             --eecceeEEEEEecCcc-----cHHHHHHH-HHHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHhh
Confidence              2234677777776431     24666665 577899998754    469999998  799999999999999998765


Q ss_pred             hc
Q 014631          419 KQ  420 (421)
Q Consensus       419 ~~  420 (421)
                      ..
T Consensus       401 ~~  402 (404)
T COG4992         401 AR  402 (404)
T ss_pred             hc
Confidence            43

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.95  E-value=1.6e-24  Score=208.51  Aligned_cols=339  Identities=15%  Similarity=0.095  Sum_probs=215.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ....++|..+.      .+.++.+++++...+.......++      .......+++...+.+.+.+|  .+...|++++
T Consensus        24 ~~~~~~l~~~~------n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~i~~~s   95 (416)
T PRK00011         24 QEEHIELIASE------NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--AEYANVQPHS   95 (416)
T ss_pred             HhcCeeeeccc------CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceeeecCC
Confidence            36678888765      246889999987765321110111      111123444423334444444  4455566655


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-----HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEAN-----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~  190 (421)
                       |++++..++.+++++||+|+++.|+|.++...     ....|++++.+++++ +++.+|++++++.+++ +++++++++
T Consensus        96 -gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~  173 (416)
T PRK00011         96 -GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGA  173 (416)
T ss_pred             -chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECC
Confidence             57799999999999999999999999764321     123456777777653 2467999999998864 688887766


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      +++  |..   .++++|.++|+++|+++|+|++|.... +.|.....+.  .   ..++++|+||++  +|.|.||++++
T Consensus       174 ~~~--~~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~---~di~~~S~~K~l--~g~~gg~i~~~  241 (416)
T PRK00011        174 SAY--SRP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--H---ADVVTTTTHKTL--RGPRGGLILTN  241 (416)
T ss_pred             CcC--CCc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--C---CcEEEecCCcCC--CCCCceEEEeC
Confidence            554  444   458999999999999999999986422 2222122222  1   237789999985  67889999985


Q ss_pred             CCCcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631          270 DPSGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS  347 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~  347 (421)
                      +       +++.+.+......  .+++......++..++......++++..++++++++++.+.|++. |+.+...+..+
T Consensus       242 ~-------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  313 (416)
T PRK00011        242 D-------EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDN  313 (416)
T ss_pred             C-------HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCC
Confidence            3       3466666554332  222333333333333322223457888899999999999999987 77632112234


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC-C-----CCCCeEEEEec------CCHHHHHHHHHHHHHHHH
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA-V-----GMKNWLRITFA------IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~-----~~~~~iRi~~~------~~~e~l~~~~~~l~~~~~  415 (421)
                      +++|+.++...    .+..++. ..++++||.+..+.. +     ..+..+|++..      .+++|++++++.|++++.
T Consensus       314 ~~~~i~~~~~~----~~~~~~~-~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~  388 (416)
T PRK00011        314 HLVLVDLRSKG----LTGKEAE-AALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD  388 (416)
T ss_pred             eEEEEeCcccC----CCHHHHH-HHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence            78888885321    1234444 455788999974321 1     12457999652      468999999999998865


Q ss_pred             H
Q 014631          416 R  416 (421)
Q Consensus       416 ~  416 (421)
                      .
T Consensus       389 ~  389 (416)
T PRK00011        389 N  389 (416)
T ss_pred             c
Confidence            4

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.95  E-value=5.6e-25  Score=213.35  Aligned_cols=326  Identities=18%  Similarity=0.198  Sum_probs=216.8

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHH---HHHhhhCCCCCCCCcEEEcCCHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIA---DYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia---~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..++++.|.+.    +..|..+.+++... +.  ...|.+.  ...+.++++++   +++.+.+|  ++++++.+|+|++
T Consensus        69 ~~~~lg~g~~~----~~~p~~~~~~~~~~-~~--~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t  139 (447)
T PRK00451         69 YPSFLGAGAYD----HYIPAVVDHIISRS-EF--YTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT  139 (447)
T ss_pred             CcccCcccccC----CcCcHHHHHHHhch-hH--HHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence            56788888755    34556665554332 11  1234331  11234555555   34466665  4566899999999


Q ss_pred             HHHHHHHHHhc-CCCCeEEEcCCCCcchHHHHhh----cCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631          120 QAIQVILTVLA-RPGANILLPKPGFPLYEANARH----TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP  194 (421)
Q Consensus       120 ~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np  194 (421)
                      +++..++.++. ++||+|+++++.|+++...+..    .|.+++.++.++  + .+|++++++.+.++++++++++| |+
T Consensus       140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~  215 (447)
T PRK00451        140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF  215 (447)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence            99999888874 7899999999999888776654    689999998754  3 68999999999889999999999 89


Q ss_pred             cccccCHHHHHHHHHHHHhcCcEEEE--cccccccccCCCCcccccccCCCCCEEEEc---ccccccCCCCceEEEEEee
Q 014631          195 CGNVFTYQQLQKIAEKARKLGIMVIS--DEVYDHLTFGSTPYVRMGVFGSTVPVITLG---SMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       195 tG~~~~~~~l~~i~~~~~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~r~G~~~~~  269 (421)
                      ||.+   .++++|.++|+++|+++++  |.+..+     ... ....++.   .+++.   ++||.+.++|+++||++++
T Consensus       216 tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g-----~~~-~~~~~~~---D~~~~s~~k~~~~~~~~Gpg~G~l~~~  283 (447)
T PRK00451        216 FGVI---EDLEEIAEIAHAGGALFIVGVDPVSLG-----LLK-PPGEYGA---DIVVGEGQPLGIPLSFGGPYLGFFATR  283 (447)
T ss_pred             CCee---CCHHHHHHHHHHCCCEEEEEcChHHhc-----cCC-CcccCCC---CEEEECCCcCCCCCCCCCCCchHHHhh
Confidence            9999   5699999999999999988  533221     100 1112222   24444   5667777788899999885


Q ss_pred             CCCcchhHHHHHHHHh----------------------------hhccc-ccCCchHHH-HHHHHHhhccchhHHHHHHH
Q 014631          270 DPSGILQELRIVDSIK----------------------------GYLNI-SSGPATFVQ-GAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~----------------------------~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~  319 (421)
                      +        ++.+.+.                            ..... ..+.+...+ .++..++....+.++++..+
T Consensus       284 ~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~  355 (447)
T PRK00451        284 K--------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE  355 (447)
T ss_pred             H--------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence            2        3444421                            11111 111122222 33333344334577899999


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCCceeEEE--EecCcccccCCCChHHHHHHHHhhcCeeE-EeCCCCC--CCCeEEE
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVM--VKLNLSLLEGISDDMEFALQLAKEESVIV-LPGMAVG--MKNWLRI  394 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~gv~v-~~g~~~~--~~~~iRi  394 (421)
                      ++.++++++.+.|++++++. +.  .+.+|.+  +.++.       +..+++.+|++ +||.. .++..+.  ..+++|+
T Consensus       356 ~~~~~~~~l~~~L~~~~g~~-~~--~~~~~~~~~v~~~~-------~~~~~~~~L~~-~gi~~~~~~~~~~~~~~~~~rv  424 (447)
T PRK00451        356 QNHQKAHYLAERLAEIGGVE-LF--DGPFFNEFVVRLPK-------PAEEVNEALLE-KGILGGYDLGRYYPELGNHLLV  424 (447)
T ss_pred             HHHHHHHHHHHHHhhcCCEE-ec--CCCeEEEEEEecCC-------CHHHHHHHHHh-cCCCCCcccccccCCcCCEEEE
Confidence            99999999999999988887 32  3344544  33321       35678877754 56653 3444443  2468999


Q ss_pred             Eec--CCHHHHHHHHHHHHHHH
Q 014631          395 TFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       395 ~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      +++  +++++++++++.|++++
T Consensus       425 s~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        425 CVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             ecCCCCCHHHHHHHHHHHHHHh
Confidence            997  89999999999998764

>PRK07505 hypothetical protein; Provisional

Probab=99.95  E-value=1.5e-24  Score=207.27  Aligned_cols=330  Identities=16%  Similarity=0.186  Sum_probs=204.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSP-----SVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~-----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .|..++||...+   +.++..+|.+.+++.+++++.. .....+     .....++++.+++++    |  .  +.++++
T Consensus        44 ~g~~~ld~~s~~---~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~~~~  112 (402)
T PRK07505         44 DGHTFVNFVSCS---YLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A--SVLTFT  112 (402)
T ss_pred             CCceEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C--CEEEEC
Confidence            478899997753   3334678999999999997521 111111     112356666666665    2  2  344455


Q ss_pred             CCHHHHHHHHHHHhc----CCCC-eEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631          116 AGCKQAIQVILTVLA----RPGA-NILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV  187 (421)
Q Consensus       116 ~g~~~al~~~~~~l~----~~gd-~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~  187 (421)
                       ++++|+..+++.+.    .+|+ .|++.+..|++...   .....+.+++.+|.       .|++++++.+.+++++++
T Consensus       113 -sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~v  184 (402)
T PRK07505        113 -SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAY  184 (402)
T ss_pred             -ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEE
Confidence             55667776665532    2233 36666656654321   12223456666654       278899998877788899


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccC--CCCCEEEEcccccccCCCCceE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFG--STVPVITLGSMSKRWIVPGWRL  263 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~  263 (421)
                      +++|+||||.+++   +++|.++|+++|+++|+||+|+...++  |... ....++  ..+++++++|+||.|+++|   
T Consensus       185 l~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~-~~~~~~~~~~d~~i~~~s~sK~~~~~G---  257 (402)
T PRK07505        185 VADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGY-VRSELDYRLNERTIIAASLGKAFGASG---  257 (402)
T ss_pred             EEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHHHcCCCCCCCeEEEEechhhhhccC---
Confidence            9999999999977   688889999999999999999654333  3322 112222  3456888999999998776   


Q ss_pred             EEEEeeCCCcchhHHHHHHHHhhhccc---ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 014631          264 GWLVTSDPSGILQELRIVDSIKGYLNI---SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC  340 (421)
Q Consensus       264 G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~  340 (421)
                      ||+++++       +++.+.+......   ..+++++++.++.++++...++++.+..++++++.+.+...+...     
T Consensus       258 g~~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----  325 (402)
T PRK07505        258 GVIMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----  325 (402)
T ss_pred             eEEEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----
Confidence            8876543       3466666554322   124555677777777653223444455555555555443332111     


Q ss_pred             cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      . .....++.++.++..     ....++...| .++||.+.++..+..   .+++|++++  .++++++++++.|.++++
T Consensus       326 ~-~g~~~~i~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~  398 (402)
T PRK07505        326 Q-SGSFLPIRLIYIGDE-----DTAIKAAKQL-LDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD  398 (402)
T ss_pred             C-CCCCCCEEEEEeCCH-----HHHHHHHHHH-HHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence            1 111122223333211     0244566665 567999998754432   268999998  799999999999999876


Q ss_pred             H
Q 014631          416 R  416 (421)
Q Consensus       416 ~  416 (421)
                      +
T Consensus       399 ~  399 (402)
T PRK07505        399 E  399 (402)
T ss_pred             h
Confidence            5

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.95  E-value=1.2e-24  Score=207.13  Aligned_cols=335  Identities=17%  Similarity=0.183  Sum_probs=220.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .|.+++||..|....+.+. .+|.+.+++.+++++..  ...| +.....+|.+.++++.    +    .+.++++++|+
T Consensus        33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~L~~~~----~----~~~~~f~~SGs  102 (397)
T TIGR03246        33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGY-TNEPVLRLAKKLVDAT----F----ADKVFFCNSGA  102 (397)
T ss_pred             CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence            5889999988754444444 68999999999988621  1112 1222345555555543    2    36899999999


Q ss_pred             HHHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHhh
Q 014631          120 QAIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus       120 ~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +|+..+++...       ++| ++|+..+.+|++....+...+..             +..++.       .|++++++.
T Consensus       103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  175 (397)
T TIGR03246       103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKAL  175 (397)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHH
Confidence            99999998762       123 57888888898875444332211             111111       278999998


Q ss_pred             hccCceEEEEeCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC
Q 014631          179 ADENTVAMVIVNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI  257 (421)
Q Consensus       179 ~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  257 (421)
                      +.+++++|++..++++.|... +.+.+++|.++|++||+++|+||+|.++.+.|... ....++....   +.++||.++
T Consensus       176 l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD---i~t~~K~lg  251 (397)
T TIGR03246       176 ISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---ILTSAKALG  251 (397)
T ss_pred             hccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC---EEEeehhhh
Confidence            877776666554456666554 78999999999999999999999998887766543 2222222222   237899975


Q ss_pred             CCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                       +|+++|+++++        +++++.+.... ..+.+.+++.+.++.++|+...   -++..++++++.+++.+.|+++.
T Consensus       252 -gG~pigav~~~--------~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~  319 (397)
T TIGR03246       252 -GGFPIGAMLTT--------TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKIN  319 (397)
T ss_pred             -CCcceeEEEEc--------HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHH
Confidence             78999999996        35667665432 2344678888888888886422   13456777778888888777641


Q ss_pred             -CccccC-CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          337 -CITCPR-KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       337 -g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                       ...++. ....|.++.+.+....   ......++..+ .++|+.+.+..    .+.+|++++  .+++++++++++|.+
T Consensus       320 ~~~~~~~~vrg~G~~~~i~~~~~~---~~~~~~~~~~l-~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~  391 (397)
T TIGR03246       320 ARYNVFSEIRGKGLLIGAVLTEAY---QGKAKQFVNAA-AEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFER  391 (397)
T ss_pred             hcCCCeEeeecCceEEEEEEcCch---hhHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence             111110 1222445555553210   01245566554 66799987632    368999766  899999999999999


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      ++++.
T Consensus       392 ~l~~~  396 (397)
T TIGR03246       392 AIEQV  396 (397)
T ss_pred             HHHHh
Confidence            98753

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.95  E-value=2.3e-24  Score=202.91  Aligned_cols=326  Identities=11%  Similarity=0.099  Sum_probs=222.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ++++++|+..+   |.++..+|.++++..+++++.....      ++...-+.+|++.+|+|++        .+..++++
T Consensus       101 ~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g--------~e~all~s  169 (476)
T PLN02955        101 FKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK--------KEDCLVCP  169 (476)
T ss_pred             CceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC--------CCcEEEEC
Confidence            45889999888   6778899999999999988632211      1112224789999999983        45677777


Q ss_pred             CHHHHHHHHHHHh--------------cCCCCeEEEcCCCCcchHHHHhhc----CceeEeeeccCCCCccCCHHHHHhh
Q 014631          117 GCKQAIQVILTVL--------------ARPGANILLPKPGFPLYEANARHT----RLEIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus       117 g~~~al~~~~~~l--------------~~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +|..|+..++.+|              ..++|.|++....|.+....++..    ++++..++++       |+++|++.
T Consensus       170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-------D~~~Le~~  242 (476)
T PLN02955        170 TGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-------DMYHLNSL  242 (476)
T ss_pred             ChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-------CHHHHHHH
Confidence            7777877777776              245678889999999998888876    4667766653       78888877


Q ss_pred             hcc--CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccc
Q 014631          179 ADE--NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSK  254 (421)
Q Consensus       179 ~~~--~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK  254 (421)
                      ++.  ..+.++++.+ -++.|.+.|   +++|.++|++||+++|+||+|+.+.++..+......++. .+..++++||||
T Consensus       243 L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK  319 (476)
T PLN02955        243 LSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK  319 (476)
T ss_pred             HHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence            642  2223445554 789999966   888888889999999999999987765433222222221 345688999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCch-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPAT-FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      +||..|   |+++++        .++++.+.....  .++++.+ ....++.++++....  -...+++++++.+++.+.
T Consensus       320 A~G~~G---Gfi~gs--------~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~  386 (476)
T PLN02955        320 AAGCHG---GFIACS--------KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL  386 (476)
T ss_pred             chhccC---ceeecH--------HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh
Confidence            987777   999885        356666665432  2233333 334444444543211  124667888888888874


Q ss_pred             hhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEec--CCHHHHHHH
Q 014631          332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFA--IEPSALEEG  406 (421)
Q Consensus       332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~--~~~e~l~~~  406 (421)
                      +    |+. .    .+..+.+.+....     ....+..+| .++||.+.+..++..+   ..+||+++  ++++||+++
T Consensus       387 ~----G~~-~----~sPI~pI~ig~~~-----~a~~~~~~L-~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~l  451 (476)
T PLN02955        387 S----GVD-I----SSPIISLVVGNQE-----KALKASRYL-LKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKL  451 (476)
T ss_pred             c----CCC-C----CCCEEEEEeCCHH-----HHHHHHHHH-HHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHH
Confidence            2    555 2    1444545554321     234455554 6779999987776553   46999997  899999999


Q ss_pred             HHHHHHHHHHh
Q 014631          407 LGRIKAFCQRH  417 (421)
Q Consensus       407 ~~~l~~~~~~~  417 (421)
                      ++.|.++.+..
T Consensus       452 v~~L~~~~~~~  462 (476)
T PLN02955        452 ITALSSCLDFD  462 (476)
T ss_pred             HHHHHHHHhhh
Confidence            99999887654

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.95  E-value=4e-25  Score=200.16  Aligned_cols=347  Identities=16%  Similarity=0.141  Sum_probs=223.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .+.+.++++.+..+     |.+++|.+++.+.+...    ....|+.  ..+.++.|+.+|+++      ++++.+|+||
T Consensus        40 ~~~~~vyld~~at~-----p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFt  108 (428)
T KOG1549|consen   40 HGTRPVYLDNQATG-----PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFT  108 (428)
T ss_pred             CCCccEEEecCcCC-----CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEe
Confidence            37788999999755     78899999999987752    1112432  334788999999999      5788889999


Q ss_pred             CCHHHHHHHHHHHhc-CCCC----eEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631          116 AGCKQAIQVILTVLA-RPGA----NILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV  187 (421)
Q Consensus       116 ~g~~~al~~~~~~l~-~~gd----~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~  187 (421)
                      +|+|++++++++.+. ..+|    +|++.+..|......+   +..|+++.++|+.  +.+.+|.+.+++.++++|+++.
T Consensus       109 s~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~  186 (428)
T KOG1549|consen  109 SGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVS  186 (428)
T ss_pred             CCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEE
Confidence            999999999999874 3455    8999999998765444   4568999999986  3445899999999999999999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +...+|.+|+.+|   +++|+++|+++|+.+++|.+|+-    |.-..++..++.+   ++..|.||+||.+|  +|+++
T Consensus       187 I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLY  254 (428)
T KOG1549|consen  187 IMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALY  254 (428)
T ss_pred             EEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEE
Confidence            9999999999965   88999999999999999999998    7777788888776   66779999999999  99999


Q ss_pred             eeC-CCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh-cCCCccccCCCC
Q 014631          268 TSD-PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK-EIPCITCPRKPE  345 (421)
Q Consensus       268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~~~~~~~  345 (421)
                      ++. ...+...+.+....+......++...+.+..+-++.+... ..+.-....+.+..+.+...+. ..+.+. ...+.
T Consensus       255 vr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~-~~~~~~~~~~~~~~~~ll~~i~~~~~~~~-~~G~~  332 (428)
T KOG1549|consen  255 VRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVN-KEMAYDEAIIKRLSEKLLMGIGQSLPEVT-LNGSG  332 (428)
T ss_pred             EccCCCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHH-hhcchhHHHHHHHHHHHHHHHhhhCchhh-ccCCc
Confidence            974 1111100111100011111123555666666655554311 1111112222233344444433 233433 11111


Q ss_pred             c---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC-------------CCCCCCeEEEEec--CCHHHHHHHH
Q 014631          346 G---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM-------------AVGMKNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       346 ~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~-------------~~~~~~~iRi~~~--~~~e~l~~~~  407 (421)
                      .   .....+.++  ...+..-..+.- .....-|.....-.             .+-.+.++||+++  ++++|++.+.
T Consensus       333 ~~~~~~~~~~~~~--~~~g~~~~~~~~-~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~  409 (428)
T KOG1549|consen  333 KSRYPGLVSLSFP--YVEGESLLMDLK-DVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLV  409 (428)
T ss_pred             ccccccceeeecc--cccCcchhhhhh-hhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHH
Confidence            1   111222233  100000011111 11111122211111             0112578999998  7899999999


Q ss_pred             HHHHHHHHHhh
Q 014631          408 GRIKAFCQRHA  418 (421)
Q Consensus       408 ~~l~~~~~~~~  418 (421)
                      +.+.+.++.++
T Consensus       410 ~~i~~~v~~~~  420 (428)
T KOG1549|consen  410 DAIKKLVSLLR  420 (428)
T ss_pred             HHHHHHHHhcc
Confidence            99999887654

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.95  E-value=8.8e-26  Score=212.53  Aligned_cols=309  Identities=14%  Similarity=0.118  Sum_probs=212.4

Q ss_pred             CCcHHHHHHHHHHHhcCC--CCCCCCC------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--
Q 014631           61 RTTPVAADAVVDAVRSAE--FDCYSPS------VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA--  130 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~--~~~y~~~------~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--  130 (421)
                      +.++.+++++.+.+....  .......      .-+.++|+.+++++      ++++++|++|+|++++++.++.++.  
T Consensus         9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~   82 (353)
T TIGR03235         9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLARA   82 (353)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence            678999999998875421  1111111      11457778888877      4678899999999999999998875  


Q ss_pred             --CCC-CeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHH
Q 014631          131 --RPG-ANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL  204 (421)
Q Consensus       131 --~~g-d~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l  204 (421)
                        ++| +.|++....|+++...   +...|.+++.++.+.  ++.+|++++++.++++++++++++++||||..++   +
T Consensus        83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~  157 (353)
T TIGR03235        83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I  157 (353)
T ss_pred             cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence              356 7788888888765433   345688998888753  4568999999999888999999999999999966   7


Q ss_pred             HHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHH
Q 014631          205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI  284 (421)
Q Consensus       205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~  284 (421)
                      ++|.++|+++|+++|+|++++...    ....+...+.   .+++.|++|+++.+|  +|++++++.....      ..+
T Consensus       158 ~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~~gp~g--~g~l~~~~~~~~~------~~~  222 (353)
T TIGR03235       158 REIAEVLEAHEAFFHVDAAQVVGK----ITVDLSADRI---DLISCSGHKIYGPKG--IGALVIRKRGKPK------APL  222 (353)
T ss_pred             HHHHHHHHHcCCEEEEEchhhcCC----ccccccccCC---CEEEeehhhcCCCCc--eEEEEEccCcccc------ccc
Confidence            889999999999999999988632    2223332222   377779999976556  8999987531000      001


Q ss_pred             hh--------hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee--EEEEec
Q 014631          285 KG--------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM--FVMVKL  354 (421)
Q Consensus       285 ~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~--~~~~~~  354 (421)
                      ..        .....++++.....++.++++. .....+++.++++++++++++.|++ +|+.+...+....  ...+.+
T Consensus       223 ~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~  300 (353)
T TIGR03235       223 KPIMFGGGQERGLRPGTLPVHLIVGMGEAAEI-ARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSI  300 (353)
T ss_pred             CceeeCCCCcCccccCCCChHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEe
Confidence            11        0112345667777777777764 2346778889999999999999988 5887432332222  233333


Q ss_pred             CcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC----CeEEEEecCCHHHHHH
Q 014631          355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK----NWLRITFAIEPSALEE  405 (421)
Q Consensus       355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~----~~iRi~~~~~~e~l~~  405 (421)
                      +.      .+..++...| ++ +|.+.+|..|...    ..+|.+++.+++++..
T Consensus       301 ~~------~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~  347 (353)
T TIGR03235       301 DG------VNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARG  347 (353)
T ss_pred             CC------cCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCc
Confidence            31      1345555554 55 9999999988653    3678888876655543

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.95  E-value=1.2e-24  Score=204.53  Aligned_cols=284  Identities=20%  Similarity=0.206  Sum_probs=198.3

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~  161 (421)
                      ....+|++.++++.+      .  +..++++||++++..++ .++++||+|++++|.|.+..    ..+...|+++..++
T Consensus        52 pt~~~le~~la~l~g------~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd  122 (366)
T PRK08247         52 PTRGVLEQAIADLEG------G--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVN  122 (366)
T ss_pred             chHHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEEC
Confidence            346899999999983      3  23477788899999876 56789999999999998753    34456888888776


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      .       .|++++++.+++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|..... ..   ++.   
T Consensus       123 ~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~-~~---p~~---  185 (366)
T PRK08247        123 T-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVL-QR---PLE---  185 (366)
T ss_pred             C-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccc-cC---chh---
Confidence            3       38899999998899999999999998766   8999999999999999999999954221 11   211   


Q ss_pred             CCCCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                       .+..+++.|+||.++.+ +.+.|++++++       .++.+.+...... ....+++.+..+...++.     +..+.+
T Consensus       186 -~g~di~i~S~sK~~~g~~d~~~G~iv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t-----l~~r~~  252 (366)
T PRK08247        186 -EGADIVIHSATKYLGGHNDVLAGLVVAKG-------QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT-----LALRMR  252 (366)
T ss_pred             -cCCcEEEeecceeccCCCceeeeEEecCh-------HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc-----HHHHHH
Confidence             12348899999998753 56889988753       2455555544332 235566666666555542     445566


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCC-CceeEEEEecCcccccCCCChHHHHH---------HHHhhcCeeEEeCCCCCC-
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKP-EGSMFVMVKLNLSLLEGISDDMEFAL---------QLAKEESVIVLPGMAVGM-  388 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ll~~~gv~v~~g~~~~~-  388 (421)
                      +.+++++.+.+.|+++|++..+..| .+|+|.| .++...     ....++.         .+....++++.|+..++. 
T Consensus       253 ~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~-----~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~  326 (366)
T PRK08247        253 QHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEE-----WVNPFLKSLKLITFAESLGGVESFITYPATQTHAD  326 (366)
T ss_pred             HHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHH-----HHHHHHHcCCcceEccCCCCCceEEECCccccccc
Confidence            7799999999999999988744455 6777776 564210     0112222         122234566667754422 


Q ss_pred             ------------CCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          389 ------------KNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       389 ------------~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                                  .+.+|+|++..  +.+.+++.|.+++.+
T Consensus       327 ~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~al~~  364 (366)
T PRK08247        327 IPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQAFKQ  364 (366)
T ss_pred             CCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence                        35799999853  566667777777654

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.94  E-value=1.6e-24  Score=203.35  Aligned_cols=327  Identities=13%  Similarity=0.086  Sum_probs=213.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      -+++||-..-- +......+|+.+.+++.+..+.     |.   +..++++++.+++.+.+|    .+++++|+|+|+|+
T Consensus         7 ~~~~ina~g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al   73 (363)
T TIGR01437         7 LKKVINASGKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGI   73 (363)
T ss_pred             CceEEECCcEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHH
Confidence            45666654333 2223345789999999998653     32   235777777777777665    34789999999999


Q ss_pred             HHHHHHhcCCCC---------------eEEEcCCCCcch----HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCc
Q 014631          123 QVILTVLARPGA---------------NILLPKPGFPLY----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENT  183 (421)
Q Consensus       123 ~~~~~~l~~~gd---------------~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~  183 (421)
                      ++++.+++++||               +|+++.|.|..|    ...+...|++++.++.+    +.+|++++++++++++
T Consensus        74 ~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t  149 (363)
T TIGR01437        74 AQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKT  149 (363)
T ss_pred             HHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhc
Confidence            999999999998               999999877755    46677889999888652    3589999999999999


Q ss_pred             eEEE-EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          184 VAMV-IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       184 ~~i~-~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++++ +++|+||+|.+.+   +++|.++|++||+++|+|++|+.-   .   .....++.   .+++.|+||++  +|++
T Consensus       150 ~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~---~---~~~~~~g~---D~~~~S~~K~l--~gp~  215 (363)
T TIGR01437       150 AAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEED---L---QKYYRLGA---DLVIYSGAKAI--EGPT  215 (363)
T ss_pred             eEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCc---h---HHHHHcCC---CEEEEeCCccc--CCCc
Confidence            8765 5678999999866   677899999999999999999721   1   11112222   27778999985  5778


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhhcccc---cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGYLNIS---SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      .|+++++        +++++.+.......   .........++.++++... ....+..+.+.++++.+.+.|+++||+.
T Consensus       216 ~G~l~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~-~~~~~~~~~~~~~~~~l~~~L~~i~g~~  286 (363)
T TIGR01437       216 SGLVLGK--------KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYL-STGKESGAEMVAKLTPFIEALNTLKGVS  286 (363)
T ss_pred             eEEEEEc--------HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHH-ccCcccHHHHHHHHHHHHHHHhcCCCeE
Confidence            9998874        23445443221110   0111112233333333211 1112223344456778999999999987


Q ss_pred             ccCC-CCcee---EEEEecCcccccCCCChHHHHHHHHhhcC--eeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHH
Q 014631          340 CPRK-PEGSM---FVMVKLNLSLLEGISDDMEFALQLAKEES--VIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKA  412 (421)
Q Consensus       340 ~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--v~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~  412 (421)
                      +... +..+.   ...+.++...  ...+..++...| ++++  |.+++  .+...+.+|+++. ++++|++.++++|.+
T Consensus       287 ~~~~~~~~~~~~~~~~v~~~~~~--~g~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~  361 (363)
T TIGR01437       287 ASIVQDEAGRDIARAEIRFDESE--LGMTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIRE  361 (363)
T ss_pred             EEEecCCCCCcCceEEEEEeccC--CCCCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHH
Confidence            4311 11111   1222333210  012466776655 6667  55554  4566788999997 779999999999987


Q ss_pred             HH
Q 014631          413 FC  414 (421)
Q Consensus       413 ~~  414 (421)
                      ++
T Consensus       362 ~~  363 (363)
T TIGR01437       362 IV  363 (363)
T ss_pred             hC
Confidence            53

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.94  E-value=2.5e-24  Score=206.08  Aligned_cols=353  Identities=18%  Similarity=0.138  Sum_probs=217.1

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|.-....+ ..+|.+.+++.+++.+.....+...  ..+.+..+++.+.+..+ ....+.++++++|++
T Consensus        30 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~ql~~~~~~~~~~~--~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse  105 (420)
T TIGR00700        30 VDGNRLIDFASGIAVLNIG-HSHPRVVDAVRTQVAEFTHTCFMVT--PYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAE  105 (420)
T ss_pred             CCCCEEEECccCHHhccCC-CCCHHHHHHHHHHHHhccCcccccc--CChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHH
Confidence            3588999998885443332 4678999999999987432222111  12333344444443222 112368999999999


Q ss_pred             HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCCC---------CccCCHHHH
Q 014631          121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPEK---------GWEVDLDGL  175 (421)
Q Consensus       121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~---------~~~~d~e~l  175 (421)
                      |+..+++... ..| .+|+....+|++....+.....              ++..++.+...         .+.-+++.+
T Consensus       106 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (420)
T TIGR00700       106 AVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAA  185 (420)
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHH
Confidence            9999988653 123 5788899999987654443211              11112221000         000124556


Q ss_pred             Hhhhc----cCceEEEEeCC-CCCcccccCH-HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          176 EALAD----ENTVAMVIVNP-GNPCGNVFTY-QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       176 ~~~~~----~~~~~i~~~~p-~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      ++.+.    ++..+.++..| +..+|..+++ +.+++|.++|++||+++|+||+|+++.+.|.. ..+..++....   +
T Consensus       186 ~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~-~a~~~~~~~pD---i  261 (420)
T TIGR00700       186 RAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAM-FACEHEGPEPD---L  261 (420)
T ss_pred             HHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchh-HHHhhcCCCCC---E
Confidence            65542    23345566667 6677887654 55999999999999999999999998877652 22233322222   3


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADI  327 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~  327 (421)
                      .+|||.++ +|+|+||++++        +++++.+.... ..+.+.+++++.++.++|+...+ ...+...+.-+..++.
T Consensus       262 ~~lsK~l~-~G~pig~v~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~  332 (420)
T TIGR00700       262 ITTAKSLA-DGLPLSGVTGR--------AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDR  332 (420)
T ss_pred             EEeecccc-CCcceEEEEec--------HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence            46999986 89999999996        35766665432 24567889999999888764222 2233333333334444


Q ss_pred             HHHHhhcCCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHH
Q 014631          328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSAL  403 (421)
Q Consensus       328 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l  403 (421)
                      +.+...++|.+..+ .+. |.++|+++.....  +.......++.. +.++||.+.|+..|+  +++|++++  .+++++
T Consensus       333 L~~l~~~~~~~~~v-rg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l  407 (420)
T TIGR00700       333 LTTLKAVDPRIGDV-RGL-GAMIAVELVDPGTTEPDAGLAERIATA-AHAAGLLLLTCGMFG--NIIRFLPPLTIGDELL  407 (420)
T ss_pred             HHHHHhhCCCEEEe-ecc-ceEEEEEEecCCCCCccHHHHHHHHHH-HHHCCeEEeccCCCC--CEEEEECCCCcCHHHH
Confidence            44444445555433 444 6788887742110  000012233333 367899999987664  78999986  689999


Q ss_pred             HHHHHHHHHHHH
Q 014631          404 EEGLGRIKAFCQ  415 (421)
Q Consensus       404 ~~~~~~l~~~~~  415 (421)
                      ++++++|.+++.
T Consensus       408 ~~~~~~l~~~l~  419 (420)
T TIGR00700       408 SEGLDILCAILA  419 (420)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999874

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PLN02242 methionine gamma-lyase

Probab=99.94  E-value=1.2e-24  Score=206.53  Aligned_cols=217  Identities=18%  Similarity=0.198  Sum_probs=164.5

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH-----hhcCceeE
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA-----RHTRLEIR  158 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~g~~~~  158 (421)
                      +.+...+|++.+|++.+        .+.+++++||++|+..++.+++++||+|+++.|.|.++...+     +..|.+++
T Consensus        74 ~~Pt~~~LE~~lA~l~g--------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~  145 (418)
T PLN02242         74 FNPTVLNLGRQMAALEG--------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTT  145 (418)
T ss_pred             CChhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEE
Confidence            34457899999999873        356778999999999999999999999999999998876554     34677766


Q ss_pred             eeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc
Q 014631          159 HFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM  237 (421)
Q Consensus       159 ~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~  237 (421)
                      .++.       .|++++++++++ ++++|++++|+||||.+.   ++++|+++|+++|+++|+|++|+.+.+..      
T Consensus       146 ~~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~------  209 (418)
T PLN02242        146 FVDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP------  209 (418)
T ss_pred             EcCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH------
Confidence            5543       288999999987 499999999999999995   68999999999999999999997654321      


Q ss_pred             cccCCCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhH
Q 014631          238 GVFGSTVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDF  313 (421)
Q Consensus       238 ~~~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~  313 (421)
                      ..++   ..+++.|+||.++++|.+ .||++++        +++++.+.....   ...+++...+.+...+...   ..
T Consensus       210 ~~~g---~divv~S~SK~l~g~g~~~gG~iv~~--------~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~t  275 (418)
T PLN02242        210 ARLG---ADVVVHSISKFISGGADIIAGAVCGP--------AELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PH  275 (418)
T ss_pred             HHcC---CcEEEEeCccccCCCCCceEEEEEcC--------HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---Cc
Confidence            1222   348899999999888887 5888875        345565554422   1234455566665555432   34


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          314 FSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      +..+.++++++++.+.+.|+++ ++.
T Consensus       276 l~~r~~~~~~~a~~la~~L~~~-~~~  300 (418)
T PLN02242        276 LSLRMKEHCRRAMEYAKRMKEL-GLK  300 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence            5567778999999999999987 455

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.94  E-value=2e-24  Score=204.95  Aligned_cols=217  Identities=15%  Similarity=0.134  Sum_probs=162.5

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEe
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRH  159 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~  159 (421)
                      +..+..+|+++++++.+        .+++++++||++|+..++.+++++||+|+++.|.|..+...    +...|++++.
T Consensus        62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~  133 (400)
T PRK06234         62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF  133 (400)
T ss_pred             CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence            56678999999999983        24678889999999999988899999999999999765443    4668888888


Q ss_pred             eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--CcEEEEcccccccccCCCCcccc
Q 014631          160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRM  237 (421)
Q Consensus       160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~  237 (421)
                      ++.       .|++++++.+++++++|++++|+||||.+.+   +++|.++|+++  |+++|+|++|+...+.    .++
T Consensus       134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~----~~l  199 (400)
T PRK06234        134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ----RPL  199 (400)
T ss_pred             ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC----Cch
Confidence            764       2789999999889999999999999999965   88888889887  9999999999875432    122


Q ss_pred             cccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhH
Q 014631          238 GVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDF  313 (421)
Q Consensus       238 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~  313 (421)
                       ..+   ..+++.|+||.++++|.++ ||+++++        ++.+.+....   ......++.....+...|+.     
T Consensus       200 -~~g---~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t-----  262 (400)
T PRK06234        200 -QLG---ADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT-----  262 (400)
T ss_pred             -hhC---CcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----
Confidence             122   2388999999998888775 8888752        4555554321   12234555555544444432     


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          314 FSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      +..+.++.+++...+.+.|+++|.+.
T Consensus       263 l~~r~~~~~~na~~~a~~L~~~~~V~  288 (400)
T PRK06234        263 LQIRMEKHCKNAMKVAKFLESHPAVE  288 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCee
Confidence            44556666788888888888876654

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.94  E-value=1.2e-23  Score=204.00  Aligned_cols=340  Identities=14%  Similarity=0.111  Sum_probs=226.6

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC---CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631           48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS---PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV  124 (421)
Q Consensus        48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~---~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~  124 (421)
                      .++.|.+.    ...++.+.+++.+.......+.|.   ..+|..+++..+.+++.+.+|.+  ...+..++|+++.+..
T Consensus        72 ~~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~  145 (481)
T PRK04366         72 FYPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTG  145 (481)
T ss_pred             eecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHH
Confidence            36667655    467788888887762222445773   45688899999999999988743  3344445555555443


Q ss_pred             H--HH-HhcCCCC----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccc
Q 014631          125 I--LT-VLARPGA----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGN  197 (421)
Q Consensus       125 ~--~~-~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~  197 (421)
                      +  ++ .+.++||    +|+++++.|+.+...+...|++++.++.+  .++.+|++++++.++++++++++++|+ |||.
T Consensus       146 l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~  222 (481)
T PRK04366        146 LLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGL  222 (481)
T ss_pred             HHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Cccc
Confidence            2  33 3456776    99999999999999999999999999874  346789999999998889999999988 9996


Q ss_pred             ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEEEeeCCCc
Q 014631          198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSG  273 (421)
Q Consensus       198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~  273 (421)
                      .  ..++++|+++|+++|+++++|+++..... |.  .+...++.   .++++|.+|+|+.|    |..+|++++++   
T Consensus       223 ~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g~--~~~~~~Ga---D~~~~~~hK~l~~P~g~Ggp~~G~l~~~~---  291 (481)
T PRK04366        223 F--ERNILEIAEIVHEAGGLLYYDGANLNAIL-GK--ARPGDMGF---DVVHLNLHKTFSTPHGGGGPGSGPVGVKE---  291 (481)
T ss_pred             c--chHHHHHHHHHHHcCCEEEEEecChhhhc-cc--CCccccCC---CEEEEechhhcCCCCCCCCCCeeeeeehh---
Confidence            5  35799999999999999999999864211 21  12223333   37888999998754    44578888753   


Q ss_pred             chhHHHHHHHHhhh--------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          274 ILQELRIVDSIKGY--------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       274 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                           ++.+.+...                    +...++.+.....++..++.....+++.++.++...+.+++.+.|+
T Consensus       292 -----~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~  366 (481)
T PRK04366        292 -----ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLK  366 (481)
T ss_pred             -----hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence                 222222100                    0001122334444555555544567778888888889999999998


Q ss_pred             cCCCccccCCCCceeE--EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEEec--CCHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMF--VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNWLRITFA--IEPSALEEGLG  408 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~~~--~~~e~l~~~~~  408 (421)
                      ++..+.   .+. ..+  +.+.++.....+ .+..++..+| .++||.+....... ..+.+|++++  ++++||+++++
T Consensus       367 ~~~~~~---~~~-~~~~~~~~~~~~~~~~g-~~~~~v~~~L-~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~  440 (481)
T PRK04366        367 DIYDLP---YDR-PCMHEFVLSGKKLKETG-VRTLDIAKRL-LDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIA  440 (481)
T ss_pred             hhCccc---CCC-CeeEEEEEECccccccC-CCHHHHHHHH-HHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHH
Confidence            862332   121 111  222222101111 1356666665 66799865222212 2568999997  79999999999


Q ss_pred             HHHHHHHHhh
Q 014631          409 RIKAFCQRHA  418 (421)
Q Consensus       409 ~l~~~~~~~~  418 (421)
                      .|+++.++..
T Consensus       441 ~l~~i~~~~~  450 (481)
T PRK04366        441 AMKQIAEEAK  450 (481)
T ss_pred             HHHHHHHHHH
Confidence            9999987764

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.94  E-value=1.6e-23  Score=200.05  Aligned_cols=350  Identities=15%  Similarity=0.157  Sum_probs=219.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|.-....+ ..+|.+.+++.+++.+.....+..  ...+.+..+++.+.+..+ ....+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse  112 (421)
T PRK09792         37 VEGNEYIDFAAGIAVLNTG-HRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAE  112 (421)
T ss_pred             CCCCEEEEccCchhhhcCC-CCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHH
Confidence            4588999998775443322 578999999999998742212211  123444455555544222 112368999999999


Q ss_pred             HHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCCccC----CHHHHHhhhc
Q 014631          121 AIQVILTVLAR-PG-ANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKGWEV----DLDGLEALAD  180 (421)
Q Consensus       121 al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----d~e~l~~~~~  180 (421)
                      |+..+++.... .| .+|+....+|++....+... +.             .+..+|.+.+. .++    +++.+++.+.
T Consensus       113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~  191 (421)
T PRK09792        113 AVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFK  191 (421)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHH
Confidence            99999886532 23 57999999999875444322 11             11222221111 112    2467777664


Q ss_pred             ----cCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          181 ----ENTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       181 ----~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                          ++..+.++..| ++++|..+ |++.+++|.++|++||+++|+||+++++.+.|.. ..+..++....   +.+|+|
T Consensus       192 ~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK  267 (421)
T PRK09792        192 SDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAK  267 (421)
T ss_pred             hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeeh
Confidence                23334445555 88999865 8899999999999999999999999999887754 34444432222   458999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l  332 (421)
                      .++ +|+|+||++++        .++++.+.... ..+.+.+++.++++.++++...+ ..+++.+ .+.++.....+.|
T Consensus       268 ~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~-~~g~~l~~~l~~l  337 (421)
T PRK09792        268 SLA-GGMPLSGVVGN--------ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERAN-QLGQRLKNTLIDA  337 (421)
T ss_pred             hhc-CCCceEEEEEc--------HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHHHHHH
Confidence            964 88999999985        35666654433 23557888999977777765332 2333333 3333333333333


Q ss_pred             -hcCCCccccCCCCc-eeEEEEecCccccc--CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHH
Q 014631          333 -KEIPCITCPRKPEG-SMFVMVKLNLSLLE--GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEG  406 (421)
Q Consensus       333 -~~~~g~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~  406 (421)
                       +++|.+.   .+.+ |+++|++++.....  .......++.. +.++||.+.+...  .++.+|+.++  .++++++++
T Consensus       338 ~~~~p~v~---~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~  411 (421)
T PRK09792        338 KESVPAIA---AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQR-ALAQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAA  411 (421)
T ss_pred             HHhCCCcc---eecccceEEEEEecCCccCCcchHHHHHHHHH-HHHCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHH
Confidence             3354433   4555 89999999643100  00012344444 4668999964211  2578999987  789999999


Q ss_pred             HHHHHHHHH
Q 014631          407 LGRIKAFCQ  415 (421)
Q Consensus       407 ~~~l~~~~~  415 (421)
                      +++|.++++
T Consensus       412 ~~~l~~~l~  420 (421)
T PRK09792        412 MKILQDALS  420 (421)
T ss_pred             HHHHHHHHh
Confidence            999999874

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.94  E-value=1.1e-23  Score=199.89  Aligned_cols=347  Identities=14%  Similarity=0.135  Sum_probs=226.7

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|...... ...+|.+.+++.+++++..  .++.. -..+....+++.+.+..+   ..+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse  109 (408)
T PRK04612         37 DQGREYLDLAAGIAVCGL-GHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE  109 (408)
T ss_pred             CCCCEEEEcCccHhhccC-CCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence            358899999887544323 2578999999999998632  12211 123444555666544322   1268999999999


Q ss_pred             HHHHHHHHhcC--------CC-CeEEEcCCCCcchHHHHhhcCceeE-e---eeccCC---CCccCCHHHHHhhhccCce
Q 014631          121 AIQVILTVLAR--------PG-ANILLPKPGFPLYEANARHTRLEIR-H---FDLLPE---KGWEVDLDGLEALADENTV  184 (421)
Q Consensus       121 al~~~~~~l~~--------~g-d~Vl~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~---~~~~~d~e~l~~~~~~~~~  184 (421)
                      |+..+++....        ++ .+|+....+|++....+........ .   -+..+.   -.+ .|++.+++.+.++..
T Consensus       110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~~  188 (408)
T PRK04612        110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGDV  188 (408)
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCCE
Confidence            99999976431        22 4689999999988655443221110 0   111110   011 278889888876677


Q ss_pred             EEEEeCCCCCcccccC--HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          185 AMVIVNPGNPCGNVFT--YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       185 ~i~~~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++++..|.+++|-+++  .+.+++|.++|++||+++|+||+|+++.+.|..+ ....   .+....+.+|||.++ +|+|
T Consensus       189 aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-a~~~---~~~~pdi~t~~K~l~-~G~p  263 (408)
T PRK04612        189 AAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF-AHWQ---EQVTPDIVTLAKALG-GGFP  263 (408)
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh-hhhh---cCCCCCEEEEcchhc-CCCc
Confidence            8889999877775544  5789999999999999999999999887766432 1111   122345679999975 7899


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc----CCC
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE----IPC  337 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g  337 (421)
                      +|+++++        +++.+.+.... ..+.+.+++.+.++.++|+...+   ++..++.+++.+++.+.|++    .+-
T Consensus       264 iga~~~~--------~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~  332 (408)
T PRK04612        264 IGAMLAG--------PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGV  332 (408)
T ss_pred             eEEEEEC--------HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            9999985        24566555432 23456789999999988875332   23444555555555555544    322


Q ss_pred             ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      +..+ .+. |.+..+++....   ......++ ..+.++||.+.+..    .+.+|+.++  .+++++++++++|.+++.
T Consensus       333 i~~v-rg~-Gl~~~i~~~~~~---~~~a~~i~-~~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~  402 (408)
T PRK04612        333 FAQV-RGR-GLMLGAVLAPAH---AGQAGAIL-DLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALA  402 (408)
T ss_pred             eeee-ecc-ceEEEEEecCch---hhHHHHHH-HHHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHH
Confidence            2212 333 556666664210   00133444 44577899997742    378999987  789999999999999999


Q ss_pred             HhhhcC
Q 014631          416 RHAKQQ  421 (421)
Q Consensus       416 ~~~~~~  421 (421)
                      ++-+++
T Consensus       403 ~~~~~~  408 (408)
T PRK04612        403 DYVAQR  408 (408)
T ss_pred             HHhhcC
Confidence            877664

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.94  E-value=1.9e-23  Score=201.58  Aligned_cols=357  Identities=14%  Similarity=0.126  Sum_probs=216.4

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|+.++||..|.-....+ ..+|.+.+++.+++++......  .....+.+..+++.+....+.+ ..+.++++++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGse  126 (451)
T PRK06918         51 VDGNQYIDFAGAIGTINVG-HSHPKVKEALHKQVDQYIHTGF--NVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAE  126 (451)
T ss_pred             CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHHhccCccc--cccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHH
Confidence            3488899998886443333 5789999999999987422111  1112244455555554433211 1258999999999


Q ss_pred             HHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhcCce--------------eEeeeccCC--CCccCC--------HHH
Q 014631          121 AIQVILTVLAR-PG-ANILLPKPGFPLYEANARHTRLE--------------IRHFDLLPE--KGWEVD--------LDG  174 (421)
Q Consensus       121 al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~g~~--------------~~~~~~~~~--~~~~~d--------~e~  174 (421)
                      |+..+++.... .| .+|+....+|++....+......              +..+|....  ...+..        .+.
T Consensus       127 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (451)
T PRK06918        127 AVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEE  206 (451)
T ss_pred             HHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHH
Confidence            99999886531 23 57888999999886555432111              111221100  001111        122


Q ss_pred             HHhhh----ccCceEEEEeCCCCC-cccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          175 LEALA----DENTVAMVIVNPGNP-CGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       175 l~~~~----~~~~~~i~~~~p~np-tG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      +++.+    .++..+.++..|... .|.+++ .+.+++|.++|++||+++|+||+|.++.+.|.. .++..++....   
T Consensus       207 ~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD---  282 (451)
T PRK06918        207 FKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD---  282 (451)
T ss_pred             HHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---
Confidence            33322    234566678888544 466554 555999999999999999999999999877753 34444442222   


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHH-HHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR-DTAD  326 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~  326 (421)
                      +.|+||.++ +|+|+||++++        +++++.+.... ..+.+.+++.+.++.++++...+..+.++.+.+. ..++
T Consensus       283 i~t~sK~l~-~G~pig~v~~~--------~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~  353 (451)
T PRK06918        283 LITVSKSLG-AGVPISGVIGR--------KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMN  353 (451)
T ss_pred             EEeeehhhc-CCCccEEEEEc--------HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence            448999976 89999999996        35666665433 2456788999999888776432333333222222 2222


Q ss_pred             HHHHHhhcCCCccccCCCCceeEEEEecCccc--ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631          327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA  402 (421)
Q Consensus       327 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~  402 (421)
                      .+.+...+.+.+..+ .+.++++.|.......  .++......+.. .+.++||.+.|+..|+  +.+|++++  .++++
T Consensus       354 ~l~~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~Gvlv~~~~~~~--~~lrl~p~l~~t~~~  429 (451)
T PRK06918        354 RFEEMKNKYNCIGDV-RGLGAMCAFELVQDRKTKEPDKTLTANICK-EANKRGLLLLSAGTYG--NVIRVLMPLVITDEQ  429 (451)
T ss_pred             HHHHHHhhCCCceee-ccceeEEEEEEccCCCcCCCcHHHHHHHHH-HHHHCCeEEeecCCCC--CEEEEECCCccCHHH
Confidence            333222334433323 4566666654432110  000001223333 3467899999976553  78999986  78999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 014631          403 LEEGLGRIKAFCQRHA  418 (421)
Q Consensus       403 l~~~~~~l~~~~~~~~  418 (421)
                      +++++++|.++++++-
T Consensus       430 id~~l~~l~~~l~~~~  445 (451)
T PRK06918        430 LEEGLTIIEESLQACY  445 (451)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998753

>TIGR01814 kynureninase kynureninase

Probab=99.94  E-value=7.4e-24  Score=202.82  Aligned_cols=326  Identities=12%  Similarity=0.102  Sum_probs=216.5

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE----FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      +.+++|+++...     +.|+.+.+++.+.+....    ...+....+...+.+.+.+ + +.+  ++++++|++|+|+|
T Consensus        26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~--g~~~~~v~~~~~~t   96 (406)
T TIGR01814        26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLV--GAKEDEVVVMNTLT   96 (406)
T ss_pred             CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-ccc--CCCCCcEEEeCCch
Confidence            678999988733     458889999887765311    0111100111122222222 1 223  36789999999999


Q ss_pred             HHHHHHHHHhcCCC---CeEEEcCCCCcchH----HHHhhcCcee----EeeeccCCCCccCCHHHHHhhh---ccCceE
Q 014631          120 QAIQVILTVLARPG---ANILLPKPGFPLYE----ANARHTRLEI----RHFDLLPEKGWEVDLDGLEALA---DENTVA  185 (421)
Q Consensus       120 ~al~~~~~~l~~~g---d~Vl~~~p~y~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~e~l~~~~---~~~~~~  185 (421)
                      ++++.++.++.+++   +.|++.+.+|++..    ..++..|+++    +.++.  +.++.++++++++.+   .+++++
T Consensus        97 ~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t~l  174 (406)
T TIGR01814        97 INLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDIAV  174 (406)
T ss_pred             HHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCeEE
Confidence            99999999876664   36888889998743    3345668776    34433  334457889888876   367889


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLG  264 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G  264 (421)
                      +++++++|.||..++   +++|.++|+++|+++++|++|+.    |.....+..++.+   +++.|.+|+++ .||   |
T Consensus       175 v~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~gvD---~~~~s~hK~l~g~pG---~  241 (406)
T TIGR01814       175 ILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDWGVD---FACWCTYKYLNAGPG---A  241 (406)
T ss_pred             EEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccCCCC---EEEEcCccccCCCCC---e
Confidence            999999999999965   88899999999999999999998    4333444444433   88899999974 344   4


Q ss_pred             EEEeeCCCcchhHHHHHHHHhh------------------------hcccccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631          265 WLVTSDPSGILQELRIVDSIKG------------------------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI  320 (421)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  320 (421)
                      .+++..+.        ...+..                        .....++++.....++.++++...+..+++.+++
T Consensus       242 ~l~v~~~~--------~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~  313 (406)
T TIGR01814       242 GAFVHEKH--------AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKK  313 (406)
T ss_pred             EEEEehhh--------hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            34443211        111110                        0011246777787888878876445567888899


Q ss_pred             HHHHHHHHHHHhhcC----CCccccCCCCc----eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeE
Q 014631          321 LRDTADICYDRIKEI----PCITCPRKPEG----SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL  392 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~----~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~i  392 (421)
                      .+.+.+++.+.|+++    +++.+. .|..    +..+.+.++.       +..++...| .++||.+...    .++.+
T Consensus       314 ~~~l~~~l~~~l~~~~~~~~~~~i~-~~~~~~~r~~~v~~~~~~-------~~~~~~~~L-~~~gi~v~~~----~~~~i  380 (406)
T TIGR01814       314 SLLLTDYLEELIKARCGGPPVLTII-TPRDHAQRGCQLSLTHPV-------PGKAVFQAL-IKRGVIGDKR----EPSVI  380 (406)
T ss_pred             HHHHHHHHHHHHHhhcCCCCceEEe-CCCChhhcCCeEEEEecC-------CHHHHHHHH-HHCCEEEecc----CCCeE
Confidence            999999999988764    356633 3321    2344455541       355666665 6679987532    24689


Q ss_pred             EEEe-c--CCHHHHHHHHHHHHHHH
Q 014631          393 RITF-A--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       393 Ri~~-~--~~~e~l~~~~~~l~~~~  414 (421)
                      |+|+ +  ++++|++++++.|++++
T Consensus       381 RiS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       381 RVAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             EEechhccCCHHHHHHHHHHHHHHh
Confidence            9998 5  69999999999998865

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.94  E-value=2.9e-23  Score=196.17  Aligned_cols=327  Identities=15%  Similarity=0.095  Sum_probs=205.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-------CCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-------EFDCYS------PSVGILPARRAIADYLNSELPCKLSP  109 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-------~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~  109 (421)
                      ...+++|+..+   |.++..++.+.+++.+++...       ..+..+      ...-+.++|+.+|++++      . +
T Consensus         3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~   72 (370)
T PRK05937          3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-P   72 (370)
T ss_pred             CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C
Confidence            45689999888   666778888888888887652       111111      12236788888888884      2 3


Q ss_pred             CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc------cCc
Q 014631          110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD------ENT  183 (421)
Q Consensus       110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~------~~~  183 (421)
                      +.+++++|+ .++..++..+.++||.|++....|.+....+.......+.++.       .|++++++.++      +++
T Consensus        73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~  144 (370)
T PRK05937         73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGR  144 (370)
T ss_pred             eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCc
Confidence            346666665 4555556666678888888888888777777655433333321       47888888775      235


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631          184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL  263 (421)
Q Consensus       184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  263 (421)
                      +++++++++|++|.+.|   +++|.++|+++|+++++|++|+...++.........+...+..+.+.||||.+|..|  .
T Consensus       145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~  219 (370)
T PRK05937        145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--A  219 (370)
T ss_pred             EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--e
Confidence            56678899999999976   888889999999999999999874432211111111221122356789999988777  3


Q ss_pred             EEEEeeCCCcchhHHHHHHHHhhh---cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 014631          264 GWLVTSDPSGILQELRIVDSIKGY---LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC  340 (421)
Q Consensus       264 G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~  340 (421)
                      |.+..+         ++.+.+...   .....+.+++...++.++++..... .+..+++++++++++.+.|... +   
T Consensus       220 ~vl~~~---------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l~~~-~---  285 (370)
T PRK05937        220 ALLSSS---------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKFSSA-A---  285 (370)
T ss_pred             EEEcCH---------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhcCCC-C---
Confidence            333321         233333211   1122345666666665666532212 2445677788888888777532 1   


Q ss_pred             cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                         +.  ....+.++..      ....+. ..+.++||.+.... +...+.+|++++  +++||++++++.|.++++++.
T Consensus       286 ---~~--~~~~i~~~~~------~~~~~~-~~L~~~gi~v~~~~-~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~  352 (370)
T PRK05937        286 ---PG--CVQPIFLPGI------SEQELY-SKLVETGIRVGVVC-FPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ  352 (370)
T ss_pred             ---CC--CEEEEEeCCh------hHHHHH-HHHHHCCeeEEeeC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence               11  1111333321      234444 45577899886422 223468999998  899999999999999998765


Q ss_pred             h
Q 014631          419 K  419 (421)
Q Consensus       419 ~  419 (421)
                      +
T Consensus       353 ~  353 (370)
T PRK05937        353 K  353 (370)
T ss_pred             C
Confidence            4

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.94  E-value=3.9e-24  Score=182.67  Aligned_cols=377  Identities=15%  Similarity=0.164  Sum_probs=267.0

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCC-cHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRT-TPVAADAVVDAVRS-AEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~-~~~v~~a~~~~~~~-~~~~~y~~~~g~~~l~~~i   95 (421)
                      +++..++..+..+.+.+.++.    ++..+||++|.-....+-|+ .|.++++-....+. ...+.|-|..|++.++++.
T Consensus         8 ~I~~a~p~~vf~~~~~y~~d~----~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A   83 (410)
T KOG1412|consen    8 NIPVAPPIEVFKLNASYGEDL----DPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAA   83 (410)
T ss_pred             CCccCChHHHHhhHHHhcccC----CcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhh
Confidence            466777888999998888777    67789999997554444444 34444433333322 2346899999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEE--EcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcC-ceeEeeeccCCCCccC
Q 014631           96 ADYLNSELPCKLSPDDVY--LTAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTR-LEIRHFDLLPEKGWEV  170 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i~--~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~  170 (421)
                      ++.+-.........++++  -+-+||.|+.+....+.  -...+|.+++|+|..+..+++..| .++..++.-..+.-.+
T Consensus        84 ~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~  163 (410)
T KOG1412|consen   84 TELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCV  163 (410)
T ss_pred             HHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCcee
Confidence            999855444345556653  34578889888877663  245689999999999999999999 4566676655555678


Q ss_pred             CHHHHHhhhccCc--eEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC--ccccccc-CCCC
Q 014631          171 DLDGLEALADENT--VAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP--YVRMGVF-GSTV  244 (421)
Q Consensus       171 d~e~l~~~~~~~~--~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~~~  244 (421)
                      |+|.+...+...+  .++++..+ +||||+-.+.++|.+|+++.++.+.+.++|-+|+++..+...  .+.+..+ +...
T Consensus       164 d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~  243 (410)
T KOG1412|consen  164 DLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGF  243 (410)
T ss_pred             cHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCC
Confidence            9999988775432  34455555 999999999999999999999999999999999998754322  1222222 2234


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc--hhHH---HHHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK--EDFF---SKIV  318 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~~~~---~~~~  318 (421)
                      .++++.||+|.||+.+-|+|-+.+--.+... .+.+..++.... ...+.|+......+.+.|+...  +.|.   ..+.
T Consensus       244 e~fv~QSFaKNfGlYneRvGnltvv~~n~a~-i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~Ms  322 (410)
T KOG1412|consen  244 ELFVCQSFAKNFGLYNERVGNLTVVVNNPAV-IAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMS  322 (410)
T ss_pred             eEEEEhhhhhhcccccccccceEEEecChhH-HHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            5788999999999999999986553222111 123344444332 3456888888899999998633  3343   3334


Q ss_pred             HHHHHHHHHHHHHhhcC--CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631          319 DILRDTADICYDRIKEI--PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT  395 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~  395 (421)
                      .+++++|..+++.|..+  || |+-+ ..+.|+|.+..+.         + ..+..|.+++.|++.+..        ||+
T Consensus       323 sRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyTGLt---------p-~qV~~li~~h~vyLl~~G--------RIn  383 (410)
T KOG1412|consen  323 SRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYTGLT---------P-AQVDHLIENHKVYLLSDG--------RIN  383 (410)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcHHHH-HhhccceeecCCC---------H-HHHHHHHHhceEEEecCC--------cEe
Confidence            56777777777777754  55 4422 4567888887663         3 456778888999998643        999


Q ss_pred             ec-CCHHHHHHHHHHHHHHHHHhh
Q 014631          396 FA-IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       396 ~~-~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++ .....++.+..+|.++++.+.
T Consensus       384 isGLN~~NveyVAkAIde~Vr~~~  407 (410)
T KOG1412|consen  384 ISGLNMKNVEYVAKAIDETVRAIK  407 (410)
T ss_pred             eeccccccHHHHHHHHHHHHHhhc
Confidence            97 777899999999999988764

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.94  E-value=1.8e-23  Score=198.06  Aligned_cols=217  Identities=19%  Similarity=0.227  Sum_probs=156.5

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~  161 (421)
                      ....+|++.+|++.+      .+  ...++++|+.++..++.+++++||+|+++.+.|.++...    +...|+++..++
T Consensus        65 p~~~~Le~~lA~l~G------~~--~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd  136 (398)
T PRK07504         65 PTVDMFEKRMCALEG------AE--DARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD  136 (398)
T ss_pred             chHHHHHHHHHHHhC------CC--eeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC
Confidence            346899999999973      32  334577888899888878889999999999999876443    345688777764


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                             ..|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|+...+.    .++ .++
T Consensus       137 -------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~----~~~-~~g  201 (398)
T PRK07504        137 -------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ----KPL-ELG  201 (398)
T ss_pred             -------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----Cch-hhC
Confidence                   26899999999889999999999999999965   888889999999999999999864321    122 222


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDI  320 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  320 (421)
                         ..+++.|+||.++++|.++|++++.+++      .+.+.+.... ......+++....+...|+.     +..+.++
T Consensus       202 ---aDivv~S~sK~l~g~g~~~GG~vv~~~~------~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t-----l~~R~~~  267 (398)
T PRK07504        202 ---AHIVVYSATKHIDGQGRCLGGVVLSDKA------WIEEHLQDYFRHTGPSLSPFNAWTLLKGLET-----LPVRVRQ  267 (398)
T ss_pred             ---CCEEEeeccccccCCccceEEEEEeCcH------HHHHHHHHHHHHhCCCCCHHHHHHHHhccch-----HHHHHHH
Confidence               2378899999999999999755543321      1222233222 22234555555554444433     5666677


Q ss_pred             HHHHHHHHHHHhhcCCCcc
Q 014631          321 LRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~  339 (421)
                      .+++...+.+.|+++|++.
T Consensus       268 ~~~na~~la~~L~~~p~v~  286 (398)
T PRK07504        268 QTESAAAIADFLAGHPKVA  286 (398)
T ss_pred             HHHHHHHHHHHHHcCCCcc
Confidence            7788888999999887765

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.94  E-value=1.6e-23  Score=198.05  Aligned_cols=220  Identities=18%  Similarity=0.214  Sum_probs=159.6

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~  162 (421)
                      ...++++.++++++        .+++++++||++|+..++.+++++||+|+++.+.|.+...    .+...|++++.++.
T Consensus        62 ~~~~le~~la~l~g--------~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  133 (390)
T PRK08133         62 TVTMFQERLAALEG--------AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL  133 (390)
T ss_pred             HHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence            36789999999873        3468899999999999999999999999999999977543    45568988888764


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                      +       |++++++.+++++++|++.+|+||+|.+.   ++++|.++|+++|+++|+|++|+.....    .++ ..+.
T Consensus       134 ~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~---dl~~I~~la~~~gi~livD~t~~~~~~~----~pl-~~g~  198 (390)
T PRK08133        134 T-------DLDAWRAAVRPNTKLFFLETPSNPLTELA---DIAALAEIAHAAGALLVVDNCFCTPALQ----QPL-KLGA  198 (390)
T ss_pred             C-------CHHHHHHhcCcCCeEEEEECCCCCCCCcC---CHHHHHHHHHHcCCEEEEECCCcccccC----Cch-hhCC
Confidence            2       78899999988999999999999999996   4789999999999999999998654321    122 1222


Q ss_pred             CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                         .+++.|+||.++.+|.++|++++.+       +++++.+...... ....++..+..+...+     +.+..+.++.
T Consensus       199 ---Divv~S~sK~~~g~g~~~GG~vv~~-------~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl-----~tl~~R~~~~  263 (390)
T PRK08133        199 ---DVVIHSATKYLDGQGRVLGGAVVGS-------KELMEEVFGFLRTAGPTLSPFNAWVFLKGL-----ETLSLRMEAH  263 (390)
T ss_pred             ---cEEEeecceeecCCcceEeEEEEcC-------HHHHHHHHHHHHHhCCCCCHHHHHHHHccc-----chHHHHHHHH
Confidence               3778999999998999885544432       2344444433322 2234444433322222     2456666777


Q ss_pred             HHHHHHHHHHhhcCCCccccCCC
Q 014631          322 RDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .+++..+.+.|+++|++..+..|
T Consensus       264 ~~~a~~la~~L~~~p~v~~v~yp  286 (390)
T PRK08133        264 SANALALAEWLEAHPGVERVFYP  286 (390)
T ss_pred             HHHHHHHHHHHHhCCCeeEEECC
Confidence            78888999999988776544343

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.93  E-value=8.5e-24  Score=200.04  Aligned_cols=289  Identities=15%  Similarity=0.137  Sum_probs=193.7

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCce
Q 014631           81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLE  156 (421)
Q Consensus        81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~  156 (421)
                      +|+ .....+|++.+|++.+        .+..+++++|+.++..++.+++++||+|+++.+.|.+......    ..|.+
T Consensus        57 r~~-~pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~  127 (386)
T PRK06767         57 RLG-NPTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMIT  127 (386)
T ss_pred             CCC-CcchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeE
Confidence            443 3446899999999983        2345555666789999998889999999999999987655443    34554


Q ss_pred             eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc
Q 014631          157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR  236 (421)
Q Consensus       157 ~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  236 (421)
                      +..++.       .|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|+.... +   .+
T Consensus       128 ~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~-~---~p  193 (386)
T PRK06767        128 HSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYL-Q---RP  193 (386)
T ss_pred             EEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccccc-C---Cc
Confidence            444322       3789999998889999999999999999965   78888899999999999999975321 1   12


Q ss_pred             ccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHh-hhcc-cccCCchHHHHHHHHHhhccchhH
Q 014631          237 MGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIK-GYLN-ISSGPATFVQGAVPQIFKNTKEDF  313 (421)
Q Consensus       237 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~~  313 (421)
                      + ..+.   .+++.|+||.++++|.++ |++++++        ++++.+. .... .....+++.+.++...|+     .
T Consensus       194 l-~~g~---Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~-----t  256 (386)
T PRK06767        194 L-ELGC---DAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLK-----T  256 (386)
T ss_pred             h-hcCC---cEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-----c
Confidence            2 1222   277889999998888885 8888753        3333332 2222 222345555554444343     2


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC
Q 014631          314 FSKIVDILRDTADICYDRIKEIPCITCPRKPE----------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG  383 (421)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  383 (421)
                      +..+.++.+++...+.+.|+++|++..+..|.          .|-.+.++++...    .+...|+..+ +..++.+.-|
T Consensus       257 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~----~~~~~f~~~l-~~~~~~~s~G  331 (386)
T PRK06767        257 LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGK----EETQAFINDL-HFITIAVSLG  331 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCH----HHHHHHHHhC-CccEEecCCC
Confidence            45566788899999999999999987544441          2234555664211    1345666654 6667666555


Q ss_pred             CCCC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          384 MAVG-----------------------MKNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       384 ~~~~-----------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                      ....                       .++.+|+|++..  +.+.+++.|.+++..
T Consensus       332 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~~  385 (386)
T PRK06767        332 DTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE--SWEDIVSDLEQALKK  385 (386)
T ss_pred             CcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence            3210                       035799999953  456667777776653

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=2.9e-23  Score=196.59  Aligned_cols=214  Identities=18%  Similarity=0.209  Sum_probs=159.3

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch----HHHHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----EANARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~  163 (421)
                      ...|++.+|++.+      . ++. +++++|++++..++.+++++||+|+++.|.|.+.    ...+...|.++..++. 
T Consensus        62 ~~~Le~~lA~l~g------~-~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~-  132 (405)
T PRK08776         62 RDLLGEALAELEG------G-AGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL-  132 (405)
T ss_pred             HHHHHHHHHHHhC------C-Cce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC-
Confidence            4688888888763      2 334 5555668999999999999999999999999873    3444556777776653 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                            .|++++++.++++++++++++|+||||.+   .++++|+++|+++|+++|+|++|....    ...++ .++.+
T Consensus       133 ------~d~~~l~~~i~~~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~----~~~pl-~~gaD  198 (405)
T PRK08776        133 ------TDPRSLADALAQSPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPA----LQKPL-EFGAD  198 (405)
T ss_pred             ------CCHHHHHHhcCcCCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCcccc----cCCcc-cccCC
Confidence                  37889999888889999999999999998   568999999999999999999997632    12232 22322


Q ss_pred             CCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          244 VPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                         +++.|.+|.++.+ +...|++++++       +++.+++...... ..+.+++.+.++...+     .+++.+.++.
T Consensus       199 ---ivv~S~tK~l~g~~~~~~G~vv~~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl-----~tl~~r~~~~  263 (405)
T PRK08776        199 ---LVLHSTTKYINGHSDVVGGAVVARD-------AELHQQLVWWANALGLTGSPFDAFLTLRGL-----RTLDARLRVH  263 (405)
T ss_pred             ---EEEecCceeecCCCCceEEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----CcHHHHHHHH
Confidence               7889999998765 46788887754       2455555443322 2345666666655444     4577888899


Q ss_pred             HHHHHHHHHHhhcCCCcc
Q 014631          322 RDTADICYDRIKEIPCIT  339 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~  339 (421)
                      .++...+.+.|+++|.+.
T Consensus       264 ~~na~~la~~L~~~p~v~  281 (405)
T PRK08776        264 QENADAIAALLDGHAAVN  281 (405)
T ss_pred             HHHHHHHHHHHHcCCCee
Confidence            999999999999887664

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.93  E-value=2.5e-23  Score=198.78  Aligned_cols=348  Identities=17%  Similarity=0.174  Sum_probs=221.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|.-.... ...+|.+.+++.+++++.....+...  ..+....+++.+....+ ....+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse  112 (421)
T PRK06777         37 VEGREYIDFAAGIAVLNT-GHRHPKVVAAVRQQLDQFTHTAYQIV--PYASYVTLAERINALAP-IDGPAKTAFFTTGAE  112 (421)
T ss_pred             CCCCEEEEcccCHHhhcc-CCCCHHHHHHHHHHHhhccccccccc--CChHHHHHHHHHHHhCC-CCCCceEEEeCCcHH
Confidence            358899999877543222 25688999999999987432222111  12333444455544322 112468999999999


Q ss_pred             HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-Cce-------------eEeeeccCCCCc----cCCHHHHHhhhc
Q 014631          121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-RLE-------------IRHFDLLPEKGW----EVDLDGLEALAD  180 (421)
Q Consensus       121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~----~~d~e~l~~~~~  180 (421)
                      |+..+++... ..| .+|+....+|++....+... +..             +..++.+ +...    ..+++.+++.+.
T Consensus       113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~l~~~~~  191 (421)
T PRK06777        113 AVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYP-NELHGVSVEEALSSVERLFK  191 (421)
T ss_pred             HHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCC-ccccCcCHHHHHHHHHHHHH
Confidence            9999988653 223 57889999999986555432 210             0111111 1010    113556777663


Q ss_pred             ----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          181 ----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       181 ----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                          ++..+.++..| ++..|. .+|++.+++|.++|++||+++|+||+|+++.+.|.. .....++...+++   ++||
T Consensus       192 ~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~sK  267 (421)
T PRK06777        192 ADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMAK  267 (421)
T ss_pred             hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eeeh
Confidence                23344556666 677886 578899999999999999999999999998777753 2333343322333   7899


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .++ +|+|+||++++        +++++.+.... ..+.+.+++.+.++.++|+...+   ++..++.+++.+++.+.|+
T Consensus       268 ~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~  335 (421)
T PRK06777        268 SLG-GGMPISAVVGR--------AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLE  335 (421)
T ss_pred             hhc-CCCceEEEEEc--------HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence            987 89999999985        35666665443 23557899999999999874322   3455566666666666665


Q ss_pred             c----CCCccccCCCCceeEEEEecCcccccCCCChHHHHH---HHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHH
Q 014631          334 E----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFAL---QLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALE  404 (421)
Q Consensus       334 ~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~  404 (421)
                      +    .|.+..+ .+.+.++ .+.+..... + ..+.++..   ..+.++||.+.|+..|+  +.+|++++  .++++++
T Consensus       336 ~l~~~~~~i~~v-rg~G~~~-~i~~~~~~~-~-~~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~  409 (421)
T PRK06777        336 KAKASCPAIVDI-RARGSMV-AVEFNDPQT-G-KPSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQFS  409 (421)
T ss_pred             HHHHhCCCeEEe-cCceEEE-EEEEecCcc-C-CccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHHH
Confidence            4    3444423 5665555 444532110 0 01222222   22466899999986654  68999996  7999999


Q ss_pred             HHHHHHHHHHH
Q 014631          405 EGLGRIKAFCQ  415 (421)
Q Consensus       405 ~~~~~l~~~~~  415 (421)
                      +++++|.+++.
T Consensus       410 ~~~~~l~~~l~  420 (421)
T PRK06777        410 KALNILTRLLA  420 (421)
T ss_pred             HHHHHHHHHHh
Confidence            99999998874

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.93  E-value=4.7e-23  Score=187.81  Aligned_cols=330  Identities=18%  Similarity=0.208  Sum_probs=240.0

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEc
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAIQVILTVLARPGANILLP  139 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~  139 (421)
                      +.++.+++++.+..-.    ...+.  ...+-+.+.+.+...++  .+ .+-++++++||.+++.++..+++|||+|++.
T Consensus        15 ~v~~~V~~am~~~~~~----h~s~~--F~~~~~~~~~~L~~v~~--t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~   86 (383)
T COG0075          15 PVPPRVLLAMARPMVG----HRSPD--FVGIMKEVLEKLRKVFG--TENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV   86 (383)
T ss_pred             CCCHHHHHHhcCCCCC----CCCHH--HHHHHHHHHHHHHHHhc--CCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence            5678888887664432    22221  23333333333333333  23 3556777889999999999999999999999


Q ss_pred             CCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631          140 KPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG  215 (421)
Q Consensus       140 ~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~  215 (421)
                      ..+.++  +..+++..|++++.+...+.  -.++++++++.+++  +.+.+.+++.-.+||+.   .++++|+++|++||
T Consensus        87 ~nG~FG~R~~~ia~~~g~~v~~~~~~wg--~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~~g  161 (383)
T COG0075          87 VNGKFGERFAEIAERYGAEVVVLEVEWG--EAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKEHG  161 (383)
T ss_pred             eCChHHHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHHcC
Confidence            888876  47889999999999886543  45899999999974  46778888888899999   67999999999999


Q ss_pred             cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCC-----------cchhHHHHHHH
Q 014631          216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPS-----------GILQELRIVDS  283 (421)
Q Consensus       216 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~-----------~~~~~~~~~~~  283 (421)
                      .++|+|.+-+.    |.....+..++.+   +++++..|.++. ||  +|.+..++..           ..++-..+.+.
T Consensus       162 ~l~iVDaVsS~----Gg~~~~vd~wgiD---v~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~  232 (383)
T COG0075         162 ALLIVDAVSSL----GGEPLKVDEWGID---VAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKY  232 (383)
T ss_pred             CEEEEEecccC----CCcccchhhcCcc---EEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHH
Confidence            99999999886    3334455555554   778889999875 45  6777775421           12211222333


Q ss_pred             HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-e-eEEEEecCcccccC
Q 014631          284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-S-MFVMVKLNLSLLEG  361 (421)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-~-~~~~~~~~~~~~~~  361 (421)
                      ++....+.++++....+++.++|+...+++++.+.++++++.+.+++.++.+ |+..+..+.. + ....+..|..    
T Consensus       233 ~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g----  307 (383)
T COG0075         233 MEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG----  307 (383)
T ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC----
Confidence            3332334468888899999999988778889999999999999999999998 8884432211 1 2233334432    


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                       .++.+....+++++|+.+.+|........+||+..  .+.+++..++.+|..++.++.
T Consensus       308 -~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g  365 (383)
T COG0075         308 -VDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG  365 (383)
T ss_pred             -CCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence             13444555778888999999888777899999975  788999999999999998864

>PRK06460 hypothetical protein; Provisional

Probab=99.93  E-value=3.1e-23  Score=195.23  Aligned_cols=221  Identities=14%  Similarity=0.126  Sum_probs=156.4

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCc----chHHHHhhcCceeEee
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP----LYEANARHTRLEIRHF  160 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~~  160 (421)
                      .....+|++++|++.+      . ...+++ ++|++++..++.+++++||+|+++.+.|.    .+...++..|.++..+
T Consensus        44 ~p~~~~L~~~lA~l~g------~-~~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~  115 (376)
T PRK06460         44 NPTVLELTKKIVELEN------A-EMGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS  115 (376)
T ss_pred             CccHHHHHHHHHHHhC------C-CcEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence            4557899999999983      3 234555 55578999999999999999999987664    3446677889888777


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      +.+       +.+.+++.++++++++++++|+||||.+++.   ++|.++|+++|+++|+|++|....    ...++   
T Consensus       116 ~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~----~~~~l---  178 (376)
T PRK06460        116 NPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPI----NQKPL---  178 (376)
T ss_pred             CCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCccc----cCChh---
Confidence            642       2234555556788999999999999999774   567888999999999999997532    11111   


Q ss_pred             CCCCCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      . .+..+++.|+||+|+.. +.++||++++        +++++.+....... .+.++.   .+..+++  ...+++.+.
T Consensus       179 ~-~~~divv~S~sK~l~G~~~~~~G~~~~~--------~~l~~~l~~~~~~~g~~~~~~---~a~~~l~--~~~~l~~r~  244 (376)
T PRK06460        179 E-LGADIVVHSASKFLAGHNDVIAGLAAGY--------GKLLNVIDQMRRTLGTSLDPH---AAYLTLR--GIKTLKIRM  244 (376)
T ss_pred             h-cCCCEEEeecceeccCCCCceEEEEecC--------HHHHHHHHHHHHhcCCCCCHH---HHHHHHh--chhhHHHHH
Confidence            1 12348899999997533 3679999874        35667776554332 233332   2223333  246678888


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ++..++++.+.+.|+++|.+..+..|
T Consensus       245 ~~~~~n~~~l~~~L~~~p~v~~v~yp  270 (376)
T PRK06460        245 DVINRNAEQIAEFLEGHPKVVKVYYP  270 (376)
T ss_pred             HHHHHHHHHHHHHHHcCCCccEEECC
Confidence            89999999999999988776534343

>PLN02624 ornithine-delta-aminotransferase

Probab=99.93  E-value=6.1e-23  Score=198.56  Aligned_cols=344  Identities=14%  Similarity=0.122  Sum_probs=216.3

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC-YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|..++||..|.-.... ...+|.+.+++.+++++..... +.......++.+.+++++    +    .+.++++++|+
T Consensus        72 ~dG~~ylD~~sg~~~~~~-Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~----~----~~~~~f~~SGs  142 (474)
T PLN02624         72 PEGKKYLDFLSAYSAVNQ-GHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF----G----YDMVLPMNTGA  142 (474)
T ss_pred             CCCCEEEEcccchhcccC-CCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc----C----CCeEEEeCChH
Confidence            347889999887544322 2568999999999998732211 111222345666666653    2    36899999999


Q ss_pred             HHHHHHHHHhcC--------C-CC-eEEEcCCCCcchHHHHhhcCceeE-e---eeccCC---CCccCCHHHHHhhhc--
Q 014631          120 QAIQVILTVLAR--------P-GA-NILLPKPGFPLYEANARHTRLEIR-H---FDLLPE---KGWEVDLDGLEALAD--  180 (421)
Q Consensus       120 ~al~~~~~~l~~--------~-gd-~Vl~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~---~~~~~d~e~l~~~~~--  180 (421)
                      +|+..+++....        + ++ .|+....+|++....+........ .   -|..+.   -.+ -|++.+++.+.  
T Consensus       143 eA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~  221 (474)
T PLN02624        143 EGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEED  221 (474)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhC
Confidence            999999875432        1 33 577788889987544433221110 0   000000   001 16788888774  


Q ss_pred             -cCceEEEEeCCCCCcccccCHH-HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631          181 -ENTVAMVIVNPGNPCGNVFTYQ-QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV  258 (421)
Q Consensus       181 -~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  258 (421)
                       +++.++++..++|++|.+++++ .+++|.++|++||+++|+||+|.++.+.|... .....+....++   ++||.++.
T Consensus       222 ~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pDiv---~lsK~lgg  297 (474)
T PLN02624        222 GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPDVV---ILGKALGG  297 (474)
T ss_pred             CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCCEE---EecccccC
Confidence             3455666667799999988776 49999999999999999999999877666532 211122222233   47899987


Q ss_pred             CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc---
Q 014631          259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE---  334 (421)
Q Consensus       259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~---  334 (421)
                      +++++|+++++        .++++.+..... .+.+.+++.+.++.++|+...+..   ..++..++.+.+.+.|++   
T Consensus       298 G~~pigav~~~--------~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~  366 (474)
T PLN02624        298 GVIPVSAVLAD--------KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQK  366 (474)
T ss_pred             CCCcceeeeec--------HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHH
Confidence            77999999985        246665544332 344678888998888886532222   222333444444444433   


Q ss_pred             -CCC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631          335 -IPC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       335 -~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                       ++. +..+ .+. |.+..+.++.... +.....+++.. +.++||.+.|+.    .+.+|++++  +++++|++++++|
T Consensus       367 ~~~~~i~~v-rg~-G~~~~i~l~~~~~-~~~~a~~~~~~-L~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L  438 (474)
T PLN02624        367 QFPKLIKEV-RGR-GLLNAVVLNSPKL-GPVSAYDVCLK-LKERGLLAKPTH----DTIIRLAPPLSISEDELQECSKAL  438 (474)
T ss_pred             hCCCceEEE-Eee-EEEEEEEecCCCc-ChHHHHHHHHH-HHhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHH
Confidence             332 2212 233 4455556643210 00123456665 477899998863    478999975  8999999999999


Q ss_pred             HHHHHHh
Q 014631          411 KAFCQRH  417 (421)
Q Consensus       411 ~~~~~~~  417 (421)
                      ++++++.
T Consensus       439 ~~~l~~~  445 (474)
T PLN02624        439 SDVLEHD  445 (474)
T ss_pred             HHHHHHH
Confidence            9998764

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.93  E-value=2.7e-23  Score=195.70  Aligned_cols=227  Identities=15%  Similarity=0.171  Sum_probs=164.4

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcC
Q 014631           79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTR  154 (421)
Q Consensus        79 ~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g  154 (421)
                      ..+|+. ....+|++.++++.+        .+++++++|+++|+..++.+++++||+|+++.|+|.+....+.    ..+
T Consensus        45 Y~R~~~-p~~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~  115 (382)
T TIGR02080        45 YSRSGN-PTRDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC  115 (382)
T ss_pred             ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence            345643 346899999999873        4679999999999999999999999999999999987554332    223


Q ss_pred             ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc
Q 014631          155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY  234 (421)
Q Consensus       155 ~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  234 (421)
                      .++..++       ..|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|..+...    
T Consensus       116 ~~v~~~d-------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----  181 (382)
T TIGR02080       116 FRVLFVD-------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ----  181 (382)
T ss_pred             eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            4444432       13789999999888999999999999999976   678888899999999999999764321    


Q ss_pred             ccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchh
Q 014631          235 VRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKED  312 (421)
Q Consensus       235 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~  312 (421)
                      .++ .++.   .++++|+||.++. ++++.|++++.+       +++.+++...... ..+.+++.+..+...++     
T Consensus       182 ~pl-~~ga---Divv~S~sK~l~G~~~~~~G~i~~~~-------~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~-----  245 (382)
T TIGR02080       182 NPL-ALGA---DLVLHSCTKYLNGHSDVIAGAVIAKD-------PQVAEELAWWANNLGVTGGAFDSYLTLRGLR-----  245 (382)
T ss_pred             Cch-hhCC---CEEEeecceeccCCCCceeEEEEeCC-------HHHHHHHHHHHHccCCCCCHHHHHHHHcccc-----
Confidence            122 1222   2788999999864 678999988754       3466666554433 33556665555433332     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          313 FFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      -+..+.++..++...+.+.|+++|.+..+..|
T Consensus       246 tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP  277 (382)
T TIGR02080       246 TLVARMRLQQRNAQAIVEYLQTQPLVKKIYYP  277 (382)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            35555677778888999999988766533333

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=6e-23  Score=193.42  Aligned_cols=224  Identities=17%  Similarity=0.209  Sum_probs=167.2

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcC
Q 014631           79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTR  154 (421)
Q Consensus        79 ~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g  154 (421)
                      +.+|+. .....|++++|++.+        .+.+++++|+++++..++.+++++||+|++++|+|.+....+.    ..|
T Consensus        46 Y~R~~~-pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g  116 (386)
T PRK08045         46 YSRRGN-PTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC  116 (386)
T ss_pred             eeCCCC-ccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence            334543 346899999999873        2469999999999999999999999999999999986443332    233


Q ss_pred             ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc
Q 014631          155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY  234 (421)
Q Consensus       155 ~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  234 (421)
                      .++..++       ..|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|.....    .
T Consensus       117 i~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~----~  182 (386)
T PRK08045        117 YRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL----Q  182 (386)
T ss_pred             eEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----C
Confidence            4554442       15889999999889999999999999999976   67888889999999999999976432    1


Q ss_pred             ccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchh
Q 014631          235 VRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKED  312 (421)
Q Consensus       235 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~  312 (421)
                      .++ .+..+   +++.|++|.++. ++.+.|++++.+       +++.+.+.... ....+.+++.+..+...|+.    
T Consensus       183 ~pl-~~gaD---ivv~S~tK~l~G~~d~~~G~vi~~~-------~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t----  247 (386)
T PRK08045        183 NPL-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----  247 (386)
T ss_pred             Cch-hhCCC---EEEeecceeccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----
Confidence            222 22222   789999999863 557789988753       24555554433 23346777888777777754    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631          313 FFSKIVDILRDTADICYDRIKEIPCITCP  341 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  341 (421)
                       +..+.++..+++..+.+.|+++|.+..+
T Consensus       248 -l~~R~~~~~~na~~la~~L~~~p~v~~V  275 (386)
T PRK08045        248 -LVPRMELAQRNAQAIVKYLQTQPLVKKL  275 (386)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence             6777888889999999999988876533

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=3.2e-23  Score=196.00  Aligned_cols=216  Identities=14%  Similarity=0.167  Sum_probs=159.4

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEee
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHF  160 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~  160 (421)
                      .+...++++.++++.+        .+..+++++|++|+..++.+++++||+|+++.|+|.+...    .+...|+++..+
T Consensus        63 ~p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v  134 (398)
T PRK08249         63 NPTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC  134 (398)
T ss_pred             ChHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc
Confidence            3446899999999973        2456777777899999999999999999999999987543    345678877665


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      +.       .|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|+..... .   ++ ..
T Consensus       135 d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~---~l-~~  199 (398)
T PRK08249        135 ET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-N---PL-AL  199 (398)
T ss_pred             CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC-C---ch-hh
Confidence            42       4899999999889999999999999999976   778889999999999999999864321 1   22 12


Q ss_pred             CCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      +.+   +++.|+||.++.+|.++ |+++++        +++.+.+...... ..+.++..+..+...++     .+..+.
T Consensus       200 ~~D---ivv~S~sK~l~g~~~~~gG~vv~~--------~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tL~~R~  263 (398)
T PRK08249        200 GAD---LVIHSATKFLSGHADALGGVVCGS--------KELMEQVYHYREINGATMDPMSAYLILRGMK-----TLKLRV  263 (398)
T ss_pred             CCC---EEeccCceecCCCCCceEEEEECC--------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc-----hHHHHH
Confidence            222   77899999988777776 555542        3466666555432 33555555555444443     245666


Q ss_pred             HHHHHHHHHHHHHhhcCCCcc
Q 014631          319 DILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      ++..+++..+.+.|+++|.+.
T Consensus       264 ~~~~~na~~la~~L~~~p~v~  284 (398)
T PRK08249        264 RQQQESAMALAKYLQTHPKVE  284 (398)
T ss_pred             HHHHHHHHHHHHHHHcCCCee
Confidence            777888889999999877654

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=6.2e-23  Score=192.62  Aligned_cols=225  Identities=13%  Similarity=0.152  Sum_probs=166.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCce
Q 014631           81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLE  156 (421)
Q Consensus        81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~  156 (421)
                      +|+ ......|++++|++.+        .+++++++|+++++..++.+++++||+|++++|.|.+....+    ...|.+
T Consensus        49 R~~-npt~~~Le~~lA~leg--------~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~  119 (388)
T PRK08861         49 RSG-NPNRGLLEQTLSELES--------GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFK  119 (388)
T ss_pred             CCC-CchHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeE
Confidence            443 3346899999999973        579999999999999999999999999999999998654332    334666


Q ss_pred             eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc
Q 014631          157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR  236 (421)
Q Consensus       157 ~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  236 (421)
                      +..++.       .|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|....+.    .+
T Consensus       120 v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----~p  185 (388)
T PRK08861        120 VQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----KP  185 (388)
T ss_pred             EEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----CC
Confidence            666641       4889999998889999999999999999976   667888899999999999999864321    12


Q ss_pred             ccccCCCCCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHH
Q 014631          237 MGVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFF  314 (421)
Q Consensus       237 ~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~  314 (421)
                      + .++.+   +++.|++|.++.+ +...|++++++       +++.+.+...... ....++.....+...|+.     +
T Consensus       186 l-~~GaD---ivv~S~tK~l~G~~d~~gG~i~~~~-------~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-----l  249 (388)
T PRK08861        186 L-ELGAD---FVIHSTTKYINGHSDVIGGVLITKT-------KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT-----L  249 (388)
T ss_pred             c-ccCCC---EEEeecceeccCCCcceeEEEEecH-------HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC-----H
Confidence            2 22333   8889999998764 46788888753       2455555544332 335566666655444543     5


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          315 SKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .-+.++..++...+.+.|+++|.+.-+..|
T Consensus       250 ~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP  279 (388)
T PRK08861        250 GARMRVHEESAQQILAYLQTQSLVGTIYHP  279 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            666777788888999999988776534344

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.93  E-value=3.5e-23  Score=195.11  Aligned_cols=223  Identities=16%  Similarity=0.136  Sum_probs=166.2

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEe
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRH  159 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~  159 (421)
                      ..+...+|++.++++.+        .+..+++++|++|+..++.+++++||+|+++.+.|.+...    .+...|.++..
T Consensus        38 ~~p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~  109 (369)
T cd00614          38 GNPTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF  109 (369)
T ss_pred             CChhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence            34456899999999873        2467778888999999999999999999999999988653    34467888777


Q ss_pred             eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631          160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV  239 (421)
Q Consensus       160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  239 (421)
                      ++.+       |++++++.+++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|++|+...+    ..++ .
T Consensus       110 v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~----~~~~-~  174 (369)
T cd00614         110 VDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYL----QRPL-E  174 (369)
T ss_pred             eCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhc----CChh-h
Confidence            7542       588999999888999999999999999955   88999999999999999999976432    1111 1


Q ss_pred             cCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          240 FGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       240 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      ++   ..+++.|+||.++.+| .+.|++++++       +++.+.+..... ...+.++..+.++...++     .+..+
T Consensus       175 ~g---~Divv~S~tK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~-----tl~~r  239 (369)
T cd00614         175 LG---ADIVVHSATKYIGGHSDVIAGVVVGSG-------EALIQRLRFLRLALGTILSPFDAWLLLRGLK-----TLPLR  239 (369)
T ss_pred             hC---CcEEEeccceeccCCCCceEEEEEeCc-------HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC-----CHHHH
Confidence            22   2388999999988766 7889999853       245566654432 233455665555544443     24556


Q ss_pred             HHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          318 VDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .++..++...+.+.|+++|++..+..|
T Consensus       240 ~~~~~~na~~la~~L~~~~~v~~V~~p  266 (369)
T cd00614         240 MERHSENALKVAEFLEKHPKVERVYYP  266 (369)
T ss_pred             HHHHHHHHHHHHHHHHcCCCccEEECC
Confidence            777888999999999988776534344

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.93  E-value=7.4e-23  Score=195.63  Aligned_cols=334  Identities=15%  Similarity=0.155  Sum_probs=216.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      .|.+++||..|..... ....+|.+.+++.+++++... ........+.++.+.+++++    |    .+.++++++|++
T Consensus        35 ~g~~~lD~~s~~~~~~-~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~  105 (401)
T TIGR01885        35 EGKRYLDFLSAYSAVN-QGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLPMNTGAE  105 (401)
T ss_pred             CCCEEEEcccCHhhcc-CCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEEeCccHH
Confidence            4788999988753322 124689999999999876321 11101222356666666654    2    358999999999


Q ss_pred             HHHHHHHHhcC---------C-CCeEEEcCCCCcch-HHHHhhcCc------------eeEeeeccCCCCccCCHHHHHh
Q 014631          121 AIQVILTVLAR---------P-GANILLPKPGFPLY-EANARHTRL------------EIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus       121 al~~~~~~l~~---------~-gd~Vl~~~p~y~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      |+..+++.+..         . .+.|+....+|++. .......+.            ++..++.       .|++++++
T Consensus       106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~  178 (401)
T TIGR01885       106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE  178 (401)
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence            99999987521         2 36788888888865 333332221            1122221       16788888


Q ss_pred             hhc---cCceEEEEeCCCCCcccccCH-HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccc
Q 014631          178 LAD---ENTVAMVIVNPGNPCGNVFTY-QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS  253 (421)
Q Consensus       178 ~~~---~~~~~i~~~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  253 (421)
                      .++   ++..++++..+++++|...++ +.+++|.++|++||+++|+||+|.++.+.|... .....+...+++   ++|
T Consensus       179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~g  254 (401)
T TIGR01885       179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLG  254 (401)
T ss_pred             HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Eee
Confidence            774   344555555568999998864 469999999999999999999998877666532 221122222233   467


Q ss_pred             cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh
Q 014631          254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       254 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  332 (421)
                      |.++.+++|+|+++++        +++++.+.... ..+.+.+++.+.++.++|+...+.   ...++.+++.+++.+.|
T Consensus       255 K~l~~g~~~ig~v~~~--------~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L  323 (401)
T TIGR01885       255 KALSGGVYPVSAVLAD--------DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQL  323 (401)
T ss_pred             ccccCCCCCcEEEEEc--------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence            9987766999999985        35666665422 234466788888888888753322   34456677788888888


Q ss_pred             hcCC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHH
Q 014631          333 KEIP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGR  409 (421)
Q Consensus       333 ~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~  409 (421)
                      ++++ .+.....+. |.+..+.++....  .....++..++ .++||.+.|+.    .+.+|++++  .+++++++++++
T Consensus       324 ~~l~~~~~~~~~g~-g~~~~i~~~~~~~--~~~~~~l~~~l-~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~  395 (401)
T TIGR01885       324 KKLPKPIITEVRGR-GLLNAIVIDESKT--GRTAWDLCLKL-KEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEI  395 (401)
T ss_pred             HhccCCceeEEeec-CeeEEEEeccCcc--hhHHHHHHHHH-HhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHH
Confidence            8762 221011233 4455455543210  01245666665 57799998753    478999987  899999999999


Q ss_pred             HHHHH
Q 014631          410 IKAFC  414 (421)
Q Consensus       410 l~~~~  414 (421)
                      |++++
T Consensus       396 l~~~l  400 (401)
T TIGR01885       396 IKKVI  400 (401)
T ss_pred             HHHHh
Confidence            99876

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.93  E-value=3.4e-22  Score=191.51  Aligned_cols=350  Identities=16%  Similarity=0.137  Sum_probs=215.6

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|.-.... ...+|.+.+++.+++.+..  .+.......+.+..+|+.+.+..+  ...+.++|+++|++
T Consensus        38 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsE  112 (443)
T PRK08360         38 IEGNEYIDFLSDAAVQNV-GHNNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSD  112 (443)
T ss_pred             CCCCEEEEccccHhhccc-CCCCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHH
Confidence            458899999888544322 3578999999999998732  121111123444555555554332  22368999999999


Q ss_pred             HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhh-cCc------------eeEeeeccCCC--Ccc--------CCHHHH
Q 014631          121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARH-TRL------------EIRHFDLLPEK--GWE--------VDLDGL  175 (421)
Q Consensus       121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~--------~d~e~l  175 (421)
                      |+..+++... ..| .+|+....+|++....+.. .|.            .+..++.+...  .+.        -+++.+
T Consensus       113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (443)
T PRK08360        113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI  192 (443)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence            9999998653 123 5788888899887433322 121            11222221100  000        123445


Q ss_pred             Hhhhc-----cCceEEEEeCC-CCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          176 EALAD-----ENTVAMVIVNP-GNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       176 ~~~~~-----~~~~~i~~~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      ++.+.     +++.++ +..| +||+|.+++ ++.++++.++|++||+++|+||+|+++.+.|..+ ....++..++++ 
T Consensus       193 ~~~l~~~~~~~~iAAv-i~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii-  269 (443)
T PRK08360        193 KEKFEGEVYAEGVAAL-FAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII-  269 (443)
T ss_pred             HHHHHhccCCCCeEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE-
Confidence            55553     234444 5556 799999877 5579999999999999999999999987777532 222223223333 


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI  327 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  327 (421)
                        ++||.++ +|+|+||++++        +++++.+.... ..+.+.+++.+.++.++|+...+.   +..++.+++.++
T Consensus       270 --tlsK~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~  335 (443)
T PRK08360        270 --TLGKPLG-GGLPISATIGR--------AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK---NLLKRAEKLGNY  335 (443)
T ss_pred             --Eeccccc-CCceeEEEEEc--------HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHH
Confidence              6799986 89999999985        35777665443 234567888888888888753322   223344444444


Q ss_pred             HHHHhh----cCCCccccCCCCceeEEEEecCcccccCCC---ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C
Q 014631          328 CYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLLEGIS---DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I  398 (421)
Q Consensus       328 ~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~  398 (421)
                      +.+.|+    +.|.+..+ .+ -|.++.+++.........   ....+... +.++|+.+.+..    .+.+|++++  .
T Consensus       336 l~~~L~~l~~~~~~v~~v-rg-~Gl~~gie~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~~----~~~lr~~P~l~~  408 (443)
T PRK08360        336 TKKRLEEMKKKHELIGDV-RG-IGLMIGVDLVKDRETKERAYEEAAKVVWR-AWELGLIVTFFS----GNVLRIQPPLTI  408 (443)
T ss_pred             HHHHHHHHHHhCCCeeee-ec-cceEEEEEEecCCcccCccHHHHHHHHHH-HHHCCeEEeecC----CCEEEEeCCCCC
Confidence            444443    34333312 23 355666666421100000   12244444 567899986532    478999776  8


Q ss_pred             CHHHHHHHHHHHHHHHHHhhh
Q 014631          399 EPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       399 ~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +++++++++++|.++++++.+
T Consensus       409 t~~~id~~~~~l~~~l~~~~~  429 (443)
T PRK08360        409 EKEVLDEGLDILEEAIEDVEE  429 (443)
T ss_pred             CHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999987654

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.93  E-value=4.8e-23  Score=195.19  Aligned_cols=226  Identities=16%  Similarity=0.159  Sum_probs=166.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch----HHHHhhcCc
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----EANARHTRL  155 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~  155 (421)
                      .+|+. ....+|++.+|++.+        .++.+++++|+.|+..++.+++++||+|+++...|.+.    ...+...|+
T Consensus        65 ~r~~~-p~~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~  135 (403)
T PRK07810         65 SRYGN-PTVSMFEERLRLIEG--------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV  135 (403)
T ss_pred             eCCCC-chHHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence            34443 346899999999973        34788888889999999988899999999998666443    445667899


Q ss_pred             eeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631          156 EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV  235 (421)
Q Consensus       156 ~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  235 (421)
                      +++.++.       .|++++++++++++++|++.+|+||+|.+.   ++++|+++|+++|+++|+|++|+......    
T Consensus       136 ~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~~----  201 (403)
T PRK07810        136 ETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQR----  201 (403)
T ss_pred             EEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccCC----
Confidence            9888763       288999999988999999999999999995   58899999999999999999998643211    


Q ss_pred             cccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhH
Q 014631          236 RMGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDF  313 (421)
Q Consensus       236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~  313 (421)
                      ++ ..+.   .+++.|++|.+++.|.++ |++++++ .      .+.+.+... .......++..++.+...|+.     
T Consensus       202 ~~-~~ga---Divv~S~tK~l~g~g~~~gG~v~~~~-~------~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t-----  265 (403)
T PRK07810        202 GL-PLGA---DVVVYSGTKHIDGQGRVLGGAILGDR-E------YIDGPVQKLMRHTGPALSAFNAWVLLKGLET-----  265 (403)
T ss_pred             hh-hcCC---cEEEccCCceecCCcCceeEEEEeCh-H------HHHHHHHHHHHHhCCCCCHHHHHHHHhccCc-----
Confidence            22 2222   378899999998888887 7776643 1      122223322 122335667777766665653     


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          314 FSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      +..+.++.+++...+.+.|+++|.+..+..|
T Consensus       266 l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP  296 (403)
T PRK07810        266 LALRVRHSNASALRIAEFLEGHPAVRWVRYP  296 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            6677777788888888999988877644433

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.93  E-value=1.5e-22  Score=189.75  Aligned_cols=244  Identities=15%  Similarity=0.140  Sum_probs=172.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      ++.++.+.++......  ....|..  ..+...||+++|++.+        .+++++++|+++|++.++.+++++||+|+
T Consensus        35 ~~~~~~~~~~~~~~~~--~~~~Y~r~~npt~~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all~~GD~Vv  104 (394)
T PRK09028         35 FDTVAEMRHAAKNRAN--GEMFYGRRGTPTHFAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFLKAGDHLL  104 (394)
T ss_pred             cCCHHHHHHHhccCcc--CCceecCCCCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            3445555554432211  1134554  2345799999999862        24789999999999999999999999999


Q ss_pred             EcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631          138 LPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK  213 (421)
Q Consensus       138 ~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~  213 (421)
                      +++|.|.++...+    ...|.++..++.       .+.+.+++.+++++++|++.+|+||||.+   .++++|+++|++
T Consensus       105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~-------~~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~  174 (394)
T PRK09028        105 MVDSCYEPTRDLCDKILKGFGIETTYYDP-------MIGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE  174 (394)
T ss_pred             EECCCcHHHHHHHHHhhhhcceEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence            9999998876533    456777766542       14578888888899999999999999988   889999999999


Q ss_pred             cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cc
Q 014631          214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN-IS  291 (421)
Q Consensus       214 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~  291 (421)
                      +|+++++|++|+...    ...++ .++.   .+++.|.+|+++.+ +.-.|+++.+        +++.+.+..... ..
T Consensus       175 ~g~~lvvD~t~a~p~----~~~Pl-~~Ga---Divv~S~tK~l~Gh~d~~~G~~~~~--------~~~~~~l~~~~~~~G  238 (394)
T PRK09028        175 HDIVVMLDNTWASPI----NSRPF-EMGV---DISIQAATKYIVGHSDVMLGTATAN--------EKHWDQLREHSYLMG  238 (394)
T ss_pred             cCCEEEEECCccccc----cCCcc-ccCc---eEEEEeCCeEecCCCCEEEEEEECC--------HHHHHHHHHHHHhcC
Confidence            999999999998632    12222 2333   38899999998665 4556765542        234444443322 23


Q ss_pred             cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .+.++.....+...|+.     +.-+.++..++...+.+.|+++|.+.-+.+|
T Consensus       239 ~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p~v~~V~yP  286 (394)
T PRK09028        239 QCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRPEVDHVRHP  286 (394)
T ss_pred             CCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            35666666655444443     6677788889999999999998876544444

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=7.6e-23  Score=193.38  Aligned_cols=223  Identities=18%  Similarity=0.178  Sum_probs=159.3

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEe
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRH  159 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~  159 (421)
                      +.....+|+++++++.+.       ... +++++|++|+..++.+++++||+|+++.|.|.+....+.    ..|+++..
T Consensus        59 ~~p~~~~Le~~lA~~~g~-------~~~-i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~  130 (388)
T PRK07811         59 GNPTRTALEEQLAALEGG-------AYG-RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP  130 (388)
T ss_pred             CCccHHHHHHHHHHHhCC-------Cce-EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence            445678999999999842       223 444567899999999999999999999999986543332    34666666


Q ss_pred             eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631          160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV  239 (421)
Q Consensus       160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  239 (421)
                      ++.       .|++++++.+++++++|++++|+||||..   .++++|.++|+++|+++|+|++|+.....    .++. 
T Consensus       131 ~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~-  195 (388)
T PRK07811        131 VDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ----QPLA-  195 (388)
T ss_pred             eCC-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC----Cchh-
Confidence            543       38899999998899999999999999988   67999999999999999999999864321    1221 


Q ss_pred             cCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          240 FGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       240 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      .+.   .+++.|++|.++.+| .+.||+++++       +++.+.+...... ....++.....+...|+     .+..+
T Consensus       196 ~ga---Divv~S~sK~l~g~~~~~gG~vv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~-----tl~~R  260 (388)
T PRK07811        196 LGA---DVVVHSTTKYIGGHSDVVGGALVTND-------EELDEAFAFLQNGAGAVPGPFDAYLTLRGLK-----TLAVR  260 (388)
T ss_pred             hCC---cEEEecCceeecCCCCcEEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccC-----cHHHH
Confidence            222   288999999988754 5679988764       2355555443332 22334444333333333     25566


Q ss_pred             HHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          318 VDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .++.+++...+.+.|+++|++..+..|
T Consensus       261 ~~~~~~na~~la~~L~~~p~v~~V~yP  287 (388)
T PRK07811        261 MDRHSENAEAVAEFLAGHPEVSTVLYP  287 (388)
T ss_pred             HHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            677788899999999988876533333

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.93  E-value=9.1e-23  Score=192.86  Aligned_cols=219  Identities=15%  Similarity=0.174  Sum_probs=158.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch----HHHHhhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----EANARHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~  162 (421)
                      ...+|++.+|++.+        .+..+++++|++|+..++.+++++||+|+++.+.|.+.    ...+...|+++..++.
T Consensus        60 ~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~  131 (391)
T TIGR01328        60 TVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM  131 (391)
T ss_pred             hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence            46789999999984        23467888888999999999999999999999988754    3344567888877764


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                      +       |++++++.+++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+.... +.   ++ ....
T Consensus       132 ~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~-~~---~~-~~g~  196 (391)
T TIGR01328       132 A-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPML-TN---PV-ALGV  196 (391)
T ss_pred             C-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhcc-CC---ch-hcCC
Confidence            2       788999999889999999999999999965   78888999999999999999986432 11   22 1222


Q ss_pred             CCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhc--cc-ccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYL--NI-SSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                         .+++.|+||.++++|.++ |+++++        +++++.+....  .. ....++.....+...|+     .+..+.
T Consensus       197 ---Divv~S~sK~lgg~g~~~gG~v~~~--------~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~-----tl~~r~  260 (391)
T TIGR01328       197 ---DVVVHSATKYIGGHGDVVAGLICGK--------AELLQQIRMVGIKDMTGSVISPFDAWLILRGLK-----TLNIRM  260 (391)
T ss_pred             ---CEEEccccccccCCCCceEEEEEcC--------HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC-----cHHHHH
Confidence               277899999999888775 555543        34556555332  11 22444444444443343     245567


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ++.+++...+.+.|+++|++..+..|
T Consensus       261 ~~~~~na~~la~~L~~~p~v~~v~yp  286 (391)
T TIGR01328       261 KRHSENAMKVAEYLKSHPAVEKVYYP  286 (391)
T ss_pred             HHHHHHHHHHHHHHHhCCCccEEECC
Confidence            77788889999999988776533333

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.93  E-value=2.4e-22  Score=193.36  Aligned_cols=352  Identities=18%  Similarity=0.135  Sum_probs=217.8

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|.-.... ...+|.+.+++.+++++..  .+.......+.+..+++.+.+..+. ...+.++++++|++
T Consensus        53 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGse  128 (443)
T PRK06058         53 VDGNRLIDLGSGIAVTSV-GNSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAE  128 (443)
T ss_pred             CCCCEEEEcCcchhhhcc-CCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHH
Confidence            348889999877533222 2578999999999998632  2222222345666666666554431 11258999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCC-CC---ccC--------CH
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPE-KG---WEV--------DL  172 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~-~~---~~~--------d~  172 (421)
                      |+..+++...  ...++|+...++|+++...+...+.              .+..++.... +.   ...        .+
T Consensus       129 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (443)
T PRK06058        129 AVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAI  208 (443)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHH
Confidence            9999988532  1237899999999998655443211              1111221100 00   000        12


Q ss_pred             HHHHhhhccCceEEEEeCCCCCc-ccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          173 DGLEALADENTVAMVIVNPGNPC-GNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       173 e~l~~~~~~~~~~i~~~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                      +.+++.+..+..+.++..|.++. |.. .+++.+++|.++|++||+++|.||+++++.+.|..+ ....++...+++   
T Consensus       209 ~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv---  284 (443)
T PRK06058        209 TVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI---  284 (443)
T ss_pred             HHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---
Confidence            33344443344455677885544 554 467889999999999999999999999987777543 222333332333   


Q ss_pred             ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631          251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY  329 (421)
Q Consensus       251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  329 (421)
                      +++|.++ +|+++|+++++        +++++.+.... ..+.+.++++++++.++|+...+.   +..++.+++.+++.
T Consensus       285 ~~gK~l~-~G~Pi~av~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~  352 (443)
T PRK06058        285 TTAKGIA-GGLPLSAVTGR--------AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEED---DLVARARQIEALMT  352 (443)
T ss_pred             EEccccc-CCCccEEEEEc--------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHH
Confidence            5689976 78999999985        35666665443 245688999999999998753322   23444455555555


Q ss_pred             HHhhc----CCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHH
Q 014631          330 DRIKE----IPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPS  401 (421)
Q Consensus       330 ~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e  401 (421)
                      +.|++    .+.+..+ .+. |.++.+.+.....  +.......+... +.++||.+.++..+  .+.+|+.++  .+++
T Consensus       353 ~~L~~l~~~~~~i~~v-rg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~  427 (443)
T PRK06058        353 DRLRALAAEDDRIGDV-RGR-GAMIAIELVKPGTTEPDAELTKALAAA-AHAAGVIVLTCGTY--GNVIRLLPPLVIGDE  427 (443)
T ss_pred             HHHHHHHhhCCcEEee-ecc-ceEEEEEEecCCCCCCcHHHHHHHHHH-HHHCCeEEeccCCC--CCEEEEECCCccCHH
Confidence            55554    3323212 344 4455555632110  000001233333 45789999886544  368999876  8999


Q ss_pred             HHHHHHHHHHHHHHHh
Q 014631          402 ALEEGLGRIKAFCQRH  417 (421)
Q Consensus       402 ~l~~~~~~l~~~~~~~  417 (421)
                      ++++++++|.++++++
T Consensus       428 ~i~~~~~~l~~~l~~~  443 (443)
T PRK06058        428 LLREGLDVLEAALADL  443 (443)
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            9999999999998753

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.93  E-value=3.5e-23  Score=198.49  Aligned_cols=345  Identities=16%  Similarity=0.108  Sum_probs=216.3

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.+++||..|.+..+.+ ..+|.+.+++.+++++.. ..|.+..+..+|.+.+++++    +   ..+.++++++|++
T Consensus        47 ~dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse  117 (426)
T PRK00062         47 VDGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE  117 (426)
T ss_pred             CCCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence            3588999999887654433 478999999999998743 23334444445555555553    1   3568999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhc-Cce----------eEeeeccCCCCc---cCCHHHHHhhhcc---
Q 014631          121 AIQVILTVLAR--PGANILLPKPGFPLYEANARHT-RLE----------IRHFDLLPEKGW---EVDLDGLEALADE---  181 (421)
Q Consensus       121 al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~-g~~----------~~~~~~~~~~~~---~~d~e~l~~~~~~---  181 (421)
                      |+..+++....  .+++|+..+++|+++...+... |..          ....+..+ +..   .-|++++++.+..   
T Consensus       118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~l~~~i~~~~~  196 (426)
T PRK00062        118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAK-HTLTAPYNDLEAVEELFEEYGD  196 (426)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCccccc-ceEEcCCCCHHHHHHHHHhCCC
Confidence            99999987543  2578999999999986433221 100          00000000 000   0267888877642   


Q ss_pred             CceEEEEeCC-CCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631          182 NTVAMVIVNP-GNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       182 ~~~~i~~~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  259 (421)
                      ++.++ ++.| ...+|...+ .+.+++|.++|++||+++|+||+|+++. .|... ....++....   +.++||.++ .
T Consensus       197 ~~aai-ivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r-~g~~~-~~~~~~~~pD---i~~~gK~l~-~  269 (426)
T PRK00062        197 EIAAV-IVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFR-VALGG-AQGYYGVTPD---LTTLGKIIG-G  269 (426)
T ss_pred             cEEEE-EEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccc-cCCcc-HHHHhCCCcc---hHhhhhHhh-C
Confidence            34444 5554 555887765 7889999999999999999999999874 33321 1112222111   358999986 7


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhh---cc-cccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhc
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGY---LN-ISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |+++|+++++        +++++.+...   .. .+.+.+++.++++.++|+...+ +..++.++.....++.+.+.+.+
T Consensus       270 G~p~ga~~~~--------~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  341 (426)
T PRK00062        270 GLPVGAFGGR--------REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKK  341 (426)
T ss_pred             CCcceeeeEH--------HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999885        4677777432   12 2347888999998888875332 33444444444444445444444


Q ss_pred             CCCccccCCCCceeEEEEecCcccccC-----CCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEG-----ISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG  406 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~  406 (421)
                      + ++.....+. |.++.+.+.......     ..+   ...+... +.++||.+.|..    .+.+++++..++++++++
T Consensus       342 ~-~~~~~vrg~-G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~-l~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~  414 (426)
T PRK00062        342 A-GIPLTVNRV-GSMFGLFFTDEPVTNYADAKKSDTERFARFFHA-MLDEGVYLAPSQ----FEAGFVSAAHTDEDIEKT  414 (426)
T ss_pred             c-CCceEEEEe-cceEEEEEecCCCcchhhhccccHHHHHHHHHH-HHHCCeEeecCC----cCceeeeccCCHHHHHHH
Confidence            5 332111233 445555554211000     001   1344444 467899998742    245678877999999999


Q ss_pred             HHHHHHHHHHh
Q 014631          407 LGRIKAFCQRH  417 (421)
Q Consensus       407 ~~~l~~~~~~~  417 (421)
                      ++.|.++++++
T Consensus       415 ~~~l~~~l~~~  425 (426)
T PRK00062        415 LEAARKAFAAL  425 (426)
T ss_pred             HHHHHHHHHhh
Confidence            99999998764

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.93  E-value=9.9e-23  Score=193.39  Aligned_cols=215  Identities=19%  Similarity=0.193  Sum_probs=157.0

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~  161 (421)
                      ....++++.++++.+      .  +..+++++|++|+..++..++++||+|+++.|.|....    ..+...|+++..++
T Consensus        65 p~~~~le~~lA~l~g------~--~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd  136 (403)
T PRK07503         65 PTLALLEQRMASLEG------G--EAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVD  136 (403)
T ss_pred             chHHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeC
Confidence            346899999999873      2  23566778889999999988999999999999997543    33456788888776


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      .+       |++++++.+++++++|++++|+||||.+.   ++++|.++|+++|+++|+|++|+.... +   .++ .++
T Consensus       137 ~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~---di~~I~~la~~~gi~lIvD~a~a~~~~-~---~~l-~~g  201 (403)
T PRK07503        137 LT-------DPAALKAAISDKTRMVYFETPANPNMRLV---DIAAVAEIAHGAGAKVVVDNTYCTPYL-Q---RPL-ELG  201 (403)
T ss_pred             CC-------CHHHHHHhcCccCcEEEEeCCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCccccc-C---Cch-hhC
Confidence            42       78999999988999999999999999995   488899999999999999999986432 1   122 122


Q ss_pred             CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh--cc-cccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY--LN-ISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      .   .+++.|+||.++.+| .+.|+++.+        +++.++++..  .. .....+++.+..+...|+     .+..+
T Consensus       202 ~---Di~v~S~tK~l~g~gd~~gG~v~~~--------~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~-----tl~~r  265 (403)
T PRK07503        202 A---DLVVHSATKYLGGHGDITAGLVVGG--------KALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK-----TLALR  265 (403)
T ss_pred             C---CEEEccccccccCCCceeEEEEEcC--------HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc-----hHHHH
Confidence            2   388899999998765 678888753        3466665532  22 223455555554444343     34555


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcc
Q 014631          318 VDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      .++..++...+.+.|+++|.+.
T Consensus       266 ~~~~~~na~~~a~~L~~~p~v~  287 (403)
T PRK07503        266 MDRHCASAQAVAEWLARHPAVE  287 (403)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcc
Confidence            5666688888888888887665

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.93  E-value=3e-22  Score=186.18  Aligned_cols=350  Identities=17%  Similarity=0.151  Sum_probs=225.3

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..|+.++||..|....+. ...+|.+.+|+.+++..-.  ...|...    +....+++.|.+..+.. ....++++++|
T Consensus        53 vdG~~ylDf~sgi~v~~~-GH~hP~Vv~Av~~q~~~~~h~~~~~~~~----e~~v~~ae~L~~~~p~~-~~~~~~f~~sG  126 (447)
T COG0160          53 VDGNEYLDFLSGIAVLNL-GHNHPRVVEAVKRQLAKLNHTHTRDLYY----EPYVELAEKLTALAPGS-GLKKVFFGNSG  126 (447)
T ss_pred             CCCCEEEEcccCcchhcc-CCCCHHHHHHHHHHHHHhhcccCCcccc----hhHHHHHHHHHHhCCcc-cCCeEEecCCc
Confidence            458999999997544333 3689999999999988743  2223222    34444444444322211 35679999999


Q ss_pred             HHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-C-------------ceeEeeeccCC--CCccC--------CH
Q 014631          119 KQAIQVILTVLA--RPGANILLPKPGFPLYEANARHT-R-------------LEIRHFDLLPE--KGWEV--------DL  172 (421)
Q Consensus       119 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~~--~~~~~--------d~  172 (421)
                      ++|++.+++...  .....|+....+|++....+... |             ..+..+|.+..  +.+..        ..
T Consensus       127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~  206 (447)
T COG0160         127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL  206 (447)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence            999999998653  23468999999998765444321 1             11333443211  11111        23


Q ss_pred             HHHHhhhc-----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC
Q 014631          173 DGLEALAD-----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP  245 (421)
Q Consensus       173 e~l~~~~~-----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  245 (421)
                      +.++..+.     +...+.++..| +...|.+ .|.+.++++.++|++||+++|+||+|.++.++|+ .+.+...+...+
T Consensus       207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~~gv~PD  285 (447)
T COG0160         207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK-MFAFEHFGVEPD  285 (447)
T ss_pred             HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-chhhhhcCCCCC
Confidence            33444231     23345566666 7778866 5667899999999999999999999999999994 556666554444


Q ss_pred             EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 014631          246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA  325 (421)
Q Consensus       246 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  325 (421)
                      ++   +++|.++. |+++|.++++        +++.+........++..|+++++++.+.|+...++   .+.++..+.-
T Consensus       286 iv---t~aK~ig~-G~Pl~avv~r--------~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G  350 (447)
T COG0160         286 IV---TLAKSLGG-GLPLSAVVGR--------AEIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEE---NLLERAAELG  350 (447)
T ss_pred             EE---EecccccC-CCceeEEecc--------HHhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHH
Confidence            44   68899655 9999999985        45666333333456789999999999999853333   3333344444


Q ss_pred             HHHHHHhh----cCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-
Q 014631          326 DICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-  397 (421)
Q Consensus       326 ~~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-  397 (421)
                      +++++.|.    +.|-+..+  -.-|.+..+++.....   +.......++. .+.++|+.+..+..+  .+.+||.+. 
T Consensus       351 ~~l~~~L~~l~~~~~~IgdV--RG~Glm~giE~v~d~~t~~p~~~~~~~i~~-~~~~~Glil~~~G~~--~nviRi~PPL  425 (447)
T COG0160         351 EYLRDRLEELQEKHPLIGDV--RGLGLMIGVELVKDRDTKEPDAELAAKIVA-RAFERGLLLLTCGPH--GNVLRILPPL  425 (447)
T ss_pred             HHHHHHHHHHHhhcCceecc--cccceEEEEEEecCCCCCCCCHHHHHHHHH-HHHHcCCEEeccCCC--CcEEEEeCCc
Confidence            44444443    44544422  2236788888764321   11111234444 457789988765432  488999987 


Q ss_pred             -CCHHHHHHHHHHHHHHHHHh
Q 014631          398 -IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~~~~  417 (421)
                       .++|+++++++.|.+++++.
T Consensus       426 ~is~e~~d~~l~il~~al~~~  446 (447)
T COG0160         426 TISDEELDEGLDILEEALKEA  446 (447)
T ss_pred             ccCHHHHHHHHHHHHHHHHhh
Confidence             78999999999999998764

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=1.3e-22  Score=191.21  Aligned_cols=216  Identities=15%  Similarity=0.156  Sum_probs=156.9

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcCceeEeee
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTRLEIRHFD  161 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~  161 (421)
                      .+...+|++.+|++++        .+++++++||++|+..++.+++++||+|+++.+.|.++...+   ...|+++..+.
T Consensus        52 np~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~  123 (385)
T PRK08574         52 NPTLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY  123 (385)
T ss_pred             CccHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence            3457899999999983        356788889999999999999999999999999999876665   34566665542


Q ss_pred             ccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          162 LLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                              +|++++++.+++ ++++|++.+|+||||.+++   +++|+++|+++|+++|+|++|+....    ..++ ..
T Consensus       124 --------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~l-~~  187 (385)
T PRK08574        124 --------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRPL-RH  187 (385)
T ss_pred             --------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CChh-hh
Confidence                    367899999887 8999999999999999976   77889999999999999999965321    1122 12


Q ss_pred             CCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      +   ..+++.|++|.++.+|-.+ |++++.+       +++.+++..... .....+++....+...|+.     +..+.
T Consensus       188 G---aDivv~S~sK~l~g~~d~~gG~vi~~~-------~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-----L~~R~  252 (385)
T PRK08574        188 G---ADFVVHSLTKYIAGHNDVVGGVAVAWS-------GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-----LEVRF  252 (385)
T ss_pred             C---CcEEEeeCceeecCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-----HHHHH
Confidence            2   2388999999987766554 6566643       245555544433 2234444444443333432     55566


Q ss_pred             HHHHHHHHHHHHHhhcCCCcc
Q 014631          319 DILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      ++..++...+.+.|+++|.+.
T Consensus       253 ~~~~~na~~la~~L~~~p~v~  273 (385)
T PRK08574        253 ERQCRNAMAIAEFLSEHPKVA  273 (385)
T ss_pred             HHHHHHHHHHHHHHHcCCCcC
Confidence            677778888899998877664

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.92  E-value=4e-22  Score=190.20  Aligned_cols=353  Identities=16%  Similarity=0.140  Sum_probs=217.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|...... ...+|.+.+++.+++++...  +.......+....+++.+.+..+ ....+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p-~~~~~~v~f~~SGse  112 (425)
T PRK07495         37 KEGRRYIDFAAGIAVVNT-GHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVP-GDFAKKTIFVTTGAE  112 (425)
T ss_pred             CCCCEEEEccccHHhhcc-CCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCC-CCCCCEEEECCchHH
Confidence            358899999888544332 35789999999999986321  11111112344445555544332 111258999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCCccCC----HHHHHhhhc
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKGWEVD----LDGLEALAD  180 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d----~e~l~~~~~  180 (421)
                      |+..+++...  ....+|+....+|+++...+... |.             .+..+|.+.+. .+.+    ++++++.+.
T Consensus       113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~  191 (425)
T PRK07495        113 AVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFK  191 (425)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHH
Confidence            9999988653  12367999999999875443321 11             12223332111 1122    444566543


Q ss_pred             ----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          181 ----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       181 ----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                          .+..+.++..| +..+|. .+|++.+++|.++|++||+++|+||+|+++.+.|.. ......+.   ...+.++||
T Consensus       192 ~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~~gv---~pDi~tlsK  267 (425)
T PRK07495        192 ADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEHHEV---AADLTTMAK  267 (425)
T ss_pred             hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeecccCC---CCCEEeehh
Confidence                23344556666 333774 578899999999999999999999999988777653 22222222   234568999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh-
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-  332 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l-  332 (421)
                      .++ +|+|+|+++++        .++++.+.... ..+.+.+++.++++.++++...+..   ..++.+++.+++.+.| 
T Consensus       268 ~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~  335 (425)
T PRK07495        268 GLA-GGFPLAAVTGR--------AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLA  335 (425)
T ss_pred             hhc-CCccceEEEEc--------HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHH
Confidence            964 78999999996        35666654432 2355788899998877776533222   2233333333333333 


Q ss_pred             ---hcCCCccccCCCCceeEEEEecCcccccCCCCh--HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHH
Q 014631          333 ---KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDD--MEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEE  405 (421)
Q Consensus       333 ---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~  405 (421)
                         +++|.+..+ .. .|++.|+++...... ..+.  ...+...+.++|+++.+....  .+.+|+.++  .+++++++
T Consensus       336 ~l~~~~~~i~~v-rG-~Gl~~~iel~~~~~~-~~~~~~~~~~~~~~~~~Gvl~~~~g~~--~~~~r~~Ppl~it~~~id~  410 (425)
T PRK07495        336 SLRETVPEIADI-RG-PGFMNAVEFNDADSG-LPSAEFANRVRLKALEKGLILLTCGVH--GNVIRFLAPITIQDDVFAE  410 (425)
T ss_pred             HHHhhCCCeeee-ec-CceEEEEEEecCCCC-CccHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEeCCCccCHHHHHH
Confidence               334444323 22 288999998542110 0111  223334456789999763221  478999987  79999999


Q ss_pred             HHHHHHHHHHHhhh
Q 014631          406 GLGRIKAFCQRHAK  419 (421)
Q Consensus       406 ~~~~l~~~~~~~~~  419 (421)
                      ++++|+++++++++
T Consensus       411 ~~~~l~~~l~~~~~  424 (425)
T PRK07495        411 ALDILEASILEASA  424 (425)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999988764

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.92  E-value=9.2e-23  Score=191.47  Aligned_cols=218  Identities=15%  Similarity=0.181  Sum_probs=157.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCce
Q 014631           81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLE  156 (421)
Q Consensus        81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~  156 (421)
                      +| +.....+|+++++++.         .++.+++++|++++..++.+++++||+|++++|+|+++...+    ...|++
T Consensus        47 ry-~~p~~~~Le~~lA~l~---------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~  116 (366)
T PRK07582         47 RA-SNPTWRALEAALGELE---------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVT  116 (366)
T ss_pred             CC-CCccHHHHHHHHHHHc---------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEE
Confidence            44 4456789999999986         235666667778999999999999999999999998876544    346888


Q ss_pred             eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc
Q 014631          157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR  236 (421)
Q Consensus       157 ~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  236 (421)
                      ++.++....      .+    .+.++++++++++|+||||.+   .++++|+++|+++|+++|+|++|....  +..  +
T Consensus       117 v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~--~~~--p  179 (366)
T PRK07582        117 VREAPTAGM------AE----AALAGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL--GQR--P  179 (366)
T ss_pred             EEEECCCCh------HH----HhccCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc--ccC--c
Confidence            888875321      11    223578899999999999987   469999999999999999999996421  221  2


Q ss_pred             ccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHH
Q 014631          237 MGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFF  314 (421)
Q Consensus       237 ~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~  314 (421)
                      +. ++.   .+++.|+||.++. +|+++||+++++       +++.+.+...... ..+++++....+...++.     +
T Consensus       180 ~~-~g~---Divv~S~sK~l~G~~g~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t-----l  243 (366)
T PRK07582        180 LE-LGA---DLVVASDTKALTGHSDLLLGYVAGRD-------PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT-----L  243 (366)
T ss_pred             hh-cCC---cEEEecccccccCCCCeeEEEEEcCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc-----H
Confidence            21 222   2788999999854 679999999753       3466666554432 335566666655555543     4


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631          315 SKIVDILRDTADICYDRIKEIPCITCP  341 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~  341 (421)
                      ..+.++.+++...+.+.|+++|.+..+
T Consensus       244 ~~R~~~~~~na~~la~~L~~~p~v~~v  270 (366)
T PRK07582        244 GLRFARQCANALAVAELLAGHPAVRGV  270 (366)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            555677778999999999988776533

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.92  E-value=1.8e-22  Score=190.62  Aligned_cols=221  Identities=19%  Similarity=0.257  Sum_probs=160.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch----HHHHhhcCc
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----EANARHTRL  155 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~  155 (421)
                      .+|+ .....++++.++++.+        .+.++++++|++++..++.+++++||+|+++.+.|.+.    ...+...|.
T Consensus        49 ~r~~-~p~~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~  119 (380)
T TIGR01325        49 SRYA-NPTVAAFEERIAALEG--------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI  119 (380)
T ss_pred             ecCC-CchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence            3444 3346899999999873        24678899999999999999999999999999988754    334566788


Q ss_pred             eeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631          156 EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV  235 (421)
Q Consensus       156 ~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  235 (421)
                      ++..++.+       |++++++.+++++++|++++|+||+|...   ++++|.++|+++|+++|+|++|+..... .   
T Consensus       120 ~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~-~---  185 (380)
T TIGR01325       120 EVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQ-Q---  185 (380)
T ss_pred             EEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC-C---
Confidence            88877642       68899998888899999999999999995   5888999999999999999999764321 1   


Q ss_pred             cccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhH
Q 014631          236 RMGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDF  313 (421)
Q Consensus       236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~  313 (421)
                      ++ .++.   .+++.|+||.++.+|.++ |+++++        +++.+.+...... ....++.....+...+     ..
T Consensus       186 pl-~~g~---Divv~S~sK~l~g~g~~~gG~vv~~--------~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l-----~t  248 (380)
T TIGR01325       186 PL-KLGA---DVVVYSATKHIDGQGRVMGGVIAGS--------EELMAEVAVYLRHTGPAMSPFNAWVLLKGL-----ET  248 (380)
T ss_pred             ch-hhCC---CEEEeeccceecCCCCeEEEEEEeC--------HHHHHHHHHHHHhhCCCCCHHHHHHHHhcc-----Cc
Confidence            22 2222   377889999998888877 556553        2455555544322 2233444433332223     33


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCccc
Q 014631          314 FSKIVDILRDTADICYDRIKEIPCITC  340 (421)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~  340 (421)
                      +..+.++..+++..+.+.|+++|++..
T Consensus       249 l~~r~~~~~~~a~~la~~L~~~p~v~~  275 (380)
T TIGR01325       249 LSLRMQKQFDSALAIAEWLQAQPQVQA  275 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence            555677778888889999998877653

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.92  E-value=3.4e-22  Score=192.38  Aligned_cols=354  Identities=17%  Similarity=0.136  Sum_probs=217.4

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|......+ ..+|.+.+++.+++++.........  ..+....+++.+.+..+  ...+.++|+++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~~~~~~~~~~~--~~~~~~~la~~L~~~~~--~~~~~v~f~~SGse  114 (433)
T PRK08117         40 VDGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQADKLMHGPSGVI--YYESILKLAEELAEITP--GGLDCFFFSNSGAE  114 (433)
T ss_pred             CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccCcccccc--CCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHH
Confidence            3488999998885443333 5789999999999986321111101  12333444444443332  23468999999999


Q ss_pred             HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-C--c-----------eeEeeeccCCC--Ccc--------CCHHH
Q 014631          121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-R--L-----------EIRHFDLLPEK--GWE--------VDLDG  174 (421)
Q Consensus       121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g--~-----------~~~~~~~~~~~--~~~--------~d~e~  174 (421)
                      |+..+++... -.| .+|+..+.+|++....+... +  .           .+..+|.+...  ..+        -++++
T Consensus       115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (433)
T PRK08117        115 AIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRD  194 (433)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHH
Confidence            9999998642 123 67888899999875443211 1  0           01222221100  000        14555


Q ss_pred             HHhhhc----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          175 LEALAD----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       175 l~~~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      +++.+.    .+..+.++..| +...|.+ .+++.++++.++|++||+++|+||+|+++.+.|.... ...++...   .
T Consensus       195 l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~p---D  270 (433)
T PRK08117        195 LESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVVP---D  270 (433)
T ss_pred             HHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCCC---C
Confidence            666543    23345566777 5566766 5778899999999999999999999999877775432 12222221   2


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI  327 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  327 (421)
                      +.|+||.++ +|+++|+++++        +++++.+.... ..+.+.++++++++.++|+...+.   +..++++++.++
T Consensus       271 i~t~sK~lg-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~  338 (433)
T PRK08117        271 IMTIAKGIA-SGLPLSAVVAS--------KELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEE---KLLDNANEMGAY  338 (433)
T ss_pred             Eeehhhhcc-CCCcceeEEEc--------HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHH
Confidence            458999986 78999999985        35666664332 234567899999998888753222   233344444555


Q ss_pred             HHHHhhc----CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHH
Q 014631          328 CYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPS  401 (421)
Q Consensus       328 ~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e  401 (421)
                      +.+.|.+    ++.+.  ..+..|.++++++..............+...+.++||.+.+...  ..+.+|++++  .+++
T Consensus       339 l~~~L~~l~~~~~~~~--~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~  414 (433)
T PRK08117        339 ALERLEVLKEKHPVIG--DVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTKE  414 (433)
T ss_pred             HHHHHHHHHhcCCcee--eeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCHH
Confidence            5555543    32222  12344667777774321000001223344455778998876321  2478999975  8999


Q ss_pred             HHHHHHHHHHHHHHHhhh
Q 014631          402 ALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       402 ~l~~~~~~l~~~~~~~~~  419 (421)
                      +|++++++|.++++++.+
T Consensus       415 ~i~~~~~~l~~~l~~~~~  432 (433)
T PRK08117        415 EIDEGLDILDEALTEYEA  432 (433)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999988754

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.92  E-value=5.2e-24  Score=184.46  Aligned_cols=373  Identities=18%  Similarity=0.201  Sum_probs=266.3

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCC-CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPC-FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i   95 (421)
                      .++++.|+++|.++...|+.+.    .+..|||+.|.-....+ +-..+.|.+|-++.+.......|-|..|++++.+..
T Consensus        29 s~V~maPpDpILGVTeAfk~D~----n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~s  104 (427)
T KOG1411|consen   29 SHVEMAPPDPILGVTEAFKKDP----NPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLS  104 (427)
T ss_pred             hcCCCCCCCCcccHHHHHhcCC----CcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHH
Confidence            5788899999999999998766    77889999997654444 335677888877777655556899999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEc--CCHHHHHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631           96 ADYLNSELPCKLSPDDVYLT--AGCKQAIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD  171 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i~~~--~g~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d  171 (421)
                      ++++-..-...+...+|+.+  -+||.|+......+  .-++..|.+++|+|.+...+....|..+..+..-.....++|
T Consensus       105 akLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld  184 (427)
T KOG1411|consen  105 AKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLD  184 (427)
T ss_pred             HHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccc
Confidence            99984322223345567654  45788888877766  357899999999999999999999998877665333345688


Q ss_pred             HHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC--ccccccc-CCCCC
Q 014631          172 LDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP--YVRMGVF-GSTVP  245 (421)
Q Consensus       172 ~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~~~~  245 (421)
                      .+.+.+-+..   +..+++....|||||+-.+.++|++|.++.++.+.+-++|.+|.+|..+.-.  ..++..+ ....+
T Consensus       185 ~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~  264 (427)
T KOG1411|consen  185 FKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHE  264 (427)
T ss_pred             hHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCc
Confidence            8877665543   2223333344999999999999999999999999999999999998754321  1112212 22346


Q ss_pred             EEEEcccccccCCCCceEEEE--EeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc--hhHH---HHH
Q 014631          246 VITLGSMSKRWIVPGWRLGWL--VTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK--EDFF---SKI  317 (421)
Q Consensus       246 ~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~~~~---~~~  317 (421)
                      ++++.|++|..|+.|-|+|.+  ++.+.+.   ...+..+++... ..+++|+......+...|++..  ..|.   +-.
T Consensus       265 ~~laQSyAKNMGLYgERvGa~svvc~~ad~---A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~M  341 (427)
T KOG1411|consen  265 ILLAQSYAKNMGLYGERVGALSVVCKDADE---AKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGM  341 (427)
T ss_pred             eEeehhhhhhcchhhhccceeEEEecCHHH---HHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHH
Confidence            788899999999999999985  4432211   112344444443 2456787788888888887633  3443   344


Q ss_pred             HHHHHHHHHHHHHHhhcC--CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631          318 VDILRDTADICYDRIKEI--PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI  394 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi  394 (421)
                      ..++...+..+.+.|+..  ++ |..+ ..+-|+|.+..+.          .+.++.|.+++.|++.--        -||
T Consensus       342 adRi~~mR~~L~d~L~~~gs~~~W~hI-~~QIGMF~fTgl~----------peQv~~l~ke~~iYmT~d--------GRi  402 (427)
T KOG1411|consen  342 ADRIISMRQQLFDALEKEGSPGNWSHI-TKQIGMFCFTGLN----------PEQVDWLTKEYHIYLTKD--------GRI  402 (427)
T ss_pred             HHhhhhhHHHHhHHhhcCCCCccHHHH-HHhhheeeecCCC----------HHHHHHHHhhheeeeccC--------ceE
Confidence            567777788888888753  22 3312 3455888877663          356788889999998631        299


Q ss_pred             Eec-CCHHHHHHHHHHHHHHHH
Q 014631          395 TFA-IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       395 ~~~-~~~e~l~~~~~~l~~~~~  415 (421)
                      |++ .+...+..+.++|+++.+
T Consensus       403 S~aG~ss~nV~yLa~aih~vtk  424 (427)
T KOG1411|consen  403 SMAGLSSSNVPYLADAIHAVTK  424 (427)
T ss_pred             eeccccccCCcccchhhHhHhc
Confidence            998 777888888888887754

>PRK05968 hypothetical protein; Provisional

Probab=99.92  E-value=3.4e-22  Score=189.05  Aligned_cols=283  Identities=15%  Similarity=0.109  Sum_probs=191.2

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~  162 (421)
                      ...+|++.++++.+      . . ..+++++|+.|+..++.+++++||+|+++.+.|.+..    ..+...|+++..++.
T Consensus        64 ~~~~le~~lA~l~g------~-~-~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  135 (389)
T PRK05968         64 TVRAFEEMLAKLEG------A-E-DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG  135 (389)
T ss_pred             hHHHHHHHHHHHhC------C-C-cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence            36799999999973      2 2 3445566678999998888999999999999998643    455667888887753


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                             .|++++++.+ +++++|++.+|+|+++..   .++++|.++|+++|+++|+|++|+...+..    ++ ..+.
T Consensus       136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~-~~g~  199 (389)
T PRK05968        136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----PI-TLGV  199 (389)
T ss_pred             -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----ch-hcCC
Confidence                   2788998887 578899998777776655   899999999999999999999997654221    22 1222


Q ss_pred             CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                         .+++.|+||.++.+| .+.|+++++        +++++++.....  .....++..+..+...|+.     +..+.+
T Consensus       200 ---Divv~S~tK~l~g~~~~~gG~i~~~--------~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t-----l~~r~~  263 (389)
T PRK05968        200 ---DLVIHSASKYLGGHSDTVAGVVAGS--------KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT-----LPLRMK  263 (389)
T ss_pred             ---cEEEeeccccccCCCCeEEEEEEEC--------HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc-----HHHHHH
Confidence               277889999988755 578888864        245555554322  2234555555555444543     466666


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCC-----------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKPE-----------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-  387 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-  387 (421)
                      +.+++...+.+.|+++|++..+..|.           .+..+.+.++..     .+..+|+..| +..++.+.-|..+. 
T Consensus       264 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-----~~~~~f~~~L-~~~~~~~s~G~~~sl  337 (389)
T PRK05968        264 AHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-----IDVRAFADAL-KLFRLGVSWGGHESL  337 (389)
T ss_pred             HHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----HHHHHHHHhC-CccEEecCCCCCCce
Confidence            77778888999999998886454441           122444556421     1345666654 55565555444332 


Q ss_pred             ---------------------C-CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          388 ---------------------M-KNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       388 ---------------------~-~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                                           . ++.+|+|++..  +.+.+++.|.+++++.
T Consensus       338 v~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--~~~dl~~dl~~al~~~  387 (389)
T PRK05968        338 VVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--GTEALWADLEQALAAA  387 (389)
T ss_pred             eeeCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHHh
Confidence                                 1 35799999942  3455566666666543

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.92  E-value=5.4e-22  Score=187.02  Aligned_cols=302  Identities=17%  Similarity=0.189  Sum_probs=200.6

Q ss_pred             HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCCCcch
Q 014631           68 DAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPGFPLY  146 (421)
Q Consensus        68 ~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~  146 (421)
                      +++.+.+..+.   |.......++++.++++++        .+++++++||++++..++..+ .++||+|+++.++|.++
T Consensus         3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~   71 (352)
T cd00616           3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT   71 (352)
T ss_pred             HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence            45556665532   3333457899999999983        246888889999999999988 58999999999999999


Q ss_pred             HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631          147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH  226 (421)
Q Consensus       147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  226 (421)
                      ...+...|.+++.+++++ +++.+|++++++.++++++++++++   ++|...   ++++|.++|+++|+++|+|++|+.
T Consensus        72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~  144 (352)
T cd00616          72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPA---DMDAIMAIAKRHGLPVIEDAAQAL  144 (352)
T ss_pred             HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcC---CHHHHHHHHHHcCCeEEEECCCCC
Confidence            999999999999998754 3567899999998888888888764   689874   478888999999999999999986


Q ss_pred             cccCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc--------------
Q 014631          227 LTFGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI--------------  290 (421)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  290 (421)
                      ......  ..+...    ..+.+.|++  |++  ++.+.|++++++       +++.+.++.....              
T Consensus       145 g~~~~~--~~~~~~----~d~~~~S~~~~K~~--~~~~gg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (352)
T cd00616         145 GATYKG--RKVGTF----GDAGAFSFHPTKNL--TTGEGGAVVTND-------EELAERARLLRNHGRDRDRFKYEHEIL  209 (352)
T ss_pred             CCeECC--EEcccC----cceeEEcCCCCCCC--cccCceEEEECC-------HHHHHHHHHHHHcCCCCCCCcccccee
Confidence            431110  011111    124566766  886  333468888754       2344444332110              


Q ss_pred             --ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----ceeEEEEecCcccccCCCC
Q 014631          291 --SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----GSMFVMVKLNLSLLEGISD  364 (421)
Q Consensus       291 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~  364 (421)
                        ....+.+....+...     ...+++..++.+++.+++.+.|.+++++.+...+.    ....+.+.++..   ...+
T Consensus       210 ~~~~~~~~~~aa~~~~~-----l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  281 (352)
T cd00616         210 GYNYRLSEIQAAIGLAQ-----LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---AGES  281 (352)
T ss_pred             eeccCcCHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---CCCC
Confidence              011222222222111     23457777788899999999999988888442222    122333344320   0124


Q ss_pred             hHHHHHHHHhhcCeeEEeCCCCCC-----------------------CCeEEEEec--CCHHHHHHHHHHHH
Q 014631          365 DMEFALQLAKEESVIVLPGMAVGM-----------------------KNWLRITFA--IEPSALEEGLGRIK  411 (421)
Q Consensus       365 ~~~~~~~ll~~~gv~v~~g~~~~~-----------------------~~~iRi~~~--~~~e~l~~~~~~l~  411 (421)
                      ..++...| +++||.+........                       .+.+|++++  ++++|++.+++.|+
T Consensus       282 ~~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         282 RDELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             HHHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence            55666654 677997653221100                       257999998  89999999998873

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.92  E-value=1.2e-21  Score=186.85  Aligned_cols=351  Identities=14%  Similarity=0.095  Sum_probs=210.8

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE-cCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKL-SPDDVYL-TAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~-~~g~  118 (421)
                      ..|..++||..|.-.... ...+|.+.+++++++.+... .. ......+.+..+++.+.+....+. ..+.+++ +++|
T Consensus        32 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~-~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG  108 (412)
T TIGR02407        32 EDGKEYIDFFAGAGALNY-GHNNPKLKQALIDYLADDGI-IH-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTG  108 (412)
T ss_pred             CCCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhccc-ee-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCc
Confidence            458899999888644332 35789999999999875211 11 111123444555555543211011 1124655 5899


Q ss_pred             HHHHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCCCCc-cCCHHHHHhhhcc-
Q 014631          119 KQAIQVILTVLAR-PG-ANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPEKGW-EVDLDGLEALADE-  181 (421)
Q Consensus       119 ~~al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~d~e~l~~~~~~-  181 (421)
                      ++|+..+++.... .| .+|+....+|++....+... |.            .+..+|.+..... .-+++.+++.+.. 
T Consensus       109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~  188 (412)
T TIGR02407       109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS  188 (412)
T ss_pred             hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence            9999999987542 33 68999999999986554432 11            1122222110000 0136667776642 


Q ss_pred             ----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccc
Q 014631          182 ----NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKR  255 (421)
Q Consensus       182 ----~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  255 (421)
                          +..+.++..| +++.|. ..|.+.+++|.++|++||+++|+||+++++.+.|..+. ....+....   +.+++|.
T Consensus       189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a-~~~~~v~PD---i~~~~K~  264 (412)
T TIGR02407       189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFS-FEPAGIEPD---IVCLSKS  264 (412)
T ss_pred             cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHH-hcccCCCCC---EEEechh
Confidence                1224445566 788888 57889999999999999999999999998877665432 122222222   2368899


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhc-cchhHH-HHHHHHHHHHHHHHHHHh
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKN-TKEDFF-SKIVDILRDTADICYDRI  332 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~-~~~~~~~~~~~~~~~~~l  332 (421)
                      ++..|+|+|++++++        ++ +.+... ...+.+.+++...++.++++. ..+..+ ++..+.-+..++.+.+..
T Consensus       265 lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~  335 (412)
T TIGR02407       265 ISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIV  335 (412)
T ss_pred             ccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            654499999999963        23 333222 223456778877776666663 222222 222222222233333333


Q ss_pred             hcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631          333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      +.++++. ...+..|+++|++++...     ....+... +.++||.+.+...+  .+.+|++++  .+++++++++++|
T Consensus       336 ~~~~~~~-~~vrg~Gl~~~l~l~~~~-----~~~~~~~~-~~~~Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~~~~l  406 (412)
T TIGR02407       336 AEYPELI-KQVRGRGLMQGIECGDGD-----LAGKIAKA-AFENGLIIETSGPN--DEVIKLLPPLTIDEETLQQGLDIL  406 (412)
T ss_pred             hhCCCce-EeeecceeEEEEEecChH-----HHHHHHHH-HHHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHHHHHH
Confidence            3344332 223556889999997421     12344444 56789999874321  467999988  7999999999999


Q ss_pred             HHHHHH
Q 014631          411 KAFCQR  416 (421)
Q Consensus       411 ~~~~~~  416 (421)
                      .+++++
T Consensus       407 ~~~l~~  412 (412)
T TIGR02407       407 EQAVEE  412 (412)
T ss_pred             HHHHhC
Confidence            999864

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.92  E-value=1.3e-21  Score=187.34  Aligned_cols=351  Identities=17%  Similarity=0.134  Sum_probs=212.7

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEE-cCC
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-EFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYL-TAG  117 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~-~~g  117 (421)
                      ..|.+++||..|...... ...+|.+.+++.+++.+. ..+..   ....+.+..+++.+.+....+.. .+.++| +++
T Consensus        36 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~---~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s  111 (425)
T PRK09264         36 EDGKEYIDFFAGAGALNY-GHNNPVLKQALIDYLQRDGITHGL---DMHTTAKREFLETFEETILKPRGLDYKVQFTGPT  111 (425)
T ss_pred             CCCCEeeecccchhhccC-CCCCHHHHHHHHHHHHhccccccc---ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence            458899999888644333 357899999999998852 11111   11123444445544432110111 225656 589


Q ss_pred             HHHHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCCCCcc-CCHHHHHhhhcc
Q 014631          118 CKQAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPEKGWE-VDLDGLEALADE  181 (421)
Q Consensus       118 ~~~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~~~-~d~e~l~~~~~~  181 (421)
                      |++|+..+++... ..| .+|+....+|+++...+... +.            .+..+|.+...... -|++++++.+..
T Consensus       112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~  191 (425)
T PRK09264        112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED  191 (425)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence            9999999998753 233 67889999999876544322 10            12223321100000 156777777642


Q ss_pred             -----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          182 -----NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       182 -----~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                           +..+.++..| +...|. .+|++.+++|.++|++||+++|+||+|+++++.|..+ ....++...++   .+++|
T Consensus       192 ~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi---~t~~K  267 (425)
T PRK09264        192 SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDI---VTLSK  267 (425)
T ss_pred             ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCE---EEecc
Confidence                 1234556666 556676 5688999999999999999999999999887766532 22222222223   36789


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .++..|+++|++++++        ++ ..+... ...+.+.++++..++.++++....  -.+..++.+++.+++.+.|+
T Consensus       268 ~l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~--~~~l~~~~~~~g~~l~~~l~  336 (425)
T PRK09264        268 SISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS--DDAFEKEVKAKGELVRERLE  336 (425)
T ss_pred             ccCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHH
Confidence            9876699999999963        23 223221 123446777777777677732111  11234444445555554443


Q ss_pred             c----CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631          334 E----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       334 ~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~  407 (421)
                      +    .|.+. ......|++.++.++...     ....++. .+.++||.+.+...+  ...+|++++  .+++++++++
T Consensus       337 ~l~~~~~~~~-~~vrg~Gl~~~i~l~~~~-----~~~~l~~-~~~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~  407 (425)
T PRK09264        337 EIAAKYPGLG-AEVRGRGMMQGIDFGDGE-----LAGKIAA-EAFENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGL  407 (425)
T ss_pred             HHHHhCCCce-ecceecccEEEEEecChH-----HHHHHHH-HHHHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHH
Confidence            3    43331 112345778888886421     1334544 456789999875332  367899887  8899999999


Q ss_pred             HHHHHHHHHhhh
Q 014631          408 GRIKAFCQRHAK  419 (421)
Q Consensus       408 ~~l~~~~~~~~~  419 (421)
                      ++|.+++++..+
T Consensus       408 ~~l~~~l~~~~~  419 (425)
T PRK09264        408 DILEEAVAEVLA  419 (425)
T ss_pred             HHHHHHHHHHHh
Confidence            999999977643

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.92  E-value=4.8e-22  Score=190.72  Aligned_cols=347  Identities=16%  Similarity=0.159  Sum_probs=216.0

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.+++||..|......+ ..+|.+.+++.+++++.....+...  ..+.+..+++.+.+..+  ...+.++++++|++
T Consensus        39 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~~~--~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse  113 (423)
T PRK05964         39 ADGRELIDAISSWWVATHG-HNHPYIDQAIREQLDRLDHVIFAGF--THEPAERLAQRLVALTP--GGLDHVFFSDSGSV  113 (423)
T ss_pred             CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHhhCCCcccccc--CCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence            3588999998885443333 5689999999999986321111111  12445556666654332  12468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHhhh
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEALA  179 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~~  179 (421)
                      |+..+++....       +| .+|+....+|++....+...+..             ...++.+..+....+++.+++.+
T Consensus       114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l  193 (423)
T PRK05964        114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL  193 (423)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence            99999886531       33 58999999999876544332211             12222211110111277777777


Q ss_pred             cc--CceEEEEeCC--CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          180 DE--NTVAMVIVNP--GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       180 ~~--~~~~i~~~~p--~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                      ..  +..+.++..|  ++.+|... +.+.+++|.++|++||+++|+||+|+++.+.|..+ ....++....   +.+++|
T Consensus       194 ~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K  269 (423)
T PRK05964        194 EKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSK  269 (423)
T ss_pred             HhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeeh
Confidence            42  2333455566  66678765 88999999999999999999999999887666432 2222222222   337889


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI  327 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  327 (421)
                      +++.+++++|+++++        +++.+.+...       ...+.+.+++...++.++++...+   ++..++.+++.++
T Consensus       270 ~l~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~  338 (423)
T PRK05964        270 GLTGGYLPLAATLCT--------AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAG  338 (423)
T ss_pred             hhhcCcccceEEEEc--------HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence            986555899998885        4677766421       112335788888888888874221   1233444444555


Q ss_pred             HHHHhhc---CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631          328 CYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA  402 (421)
Q Consensus       328 ~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~  402 (421)
                      +.+.|++   .|.+..+ . ..|.+..+.+.....  ......+... +.++||.+.+.     .+.+|++++  ++++|
T Consensus       339 l~~~l~~l~~~~~i~~v-r-g~Gl~~~i~l~~~~~--~~~~~~l~~~-l~~~Gv~v~~~-----~~~lR~~p~l~~t~ed  408 (423)
T PRK05964        339 LAEGLEPFRDLPGVADV-R-VLGAIGAVELDRPVL--ERDGPALRAF-ALERGVLLRPL-----GNTIYLMPPYIITAEE  408 (423)
T ss_pred             HHHHHHhhccCCCeEEe-e-cccEEEEEEeccCcc--hhHHHHHHHH-HHHCCeEEEec-----CCEEEEeCCcccCHHH
Confidence            5555544   3433211 2 235566666753210  0013345554 46789999874     257999988  89999


Q ss_pred             HHHHHHHHHHHHHHh
Q 014631          403 LEEGLGRIKAFCQRH  417 (421)
Q Consensus       403 l~~~~~~l~~~~~~~  417 (421)
                      |++++++|+++++++
T Consensus       409 Id~~v~~l~~al~~~  423 (423)
T PRK05964        409 LDRITDAIVEVADEL  423 (423)
T ss_pred             HHHHHHHHHHHHhhC
Confidence            999999999998764

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.92  E-value=1.6e-21  Score=183.40  Aligned_cols=310  Identities=17%  Similarity=0.239  Sum_probs=195.5

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcC
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPK  140 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~  140 (421)
                      ..+...+++.+.+..+...+.++  -..++++.+++++    |    .+++++|+|+++++.+++.++ .+|||+|+++.
T Consensus         9 ~~~~e~~a~~~~~~~~~~~~~g~--~~~~~e~~la~~~----g----~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~   78 (376)
T TIGR02379         9 VTGQELEYIAEAISEGKLSGDGP--FSRRCETWLENRT----G----TKKALLTPSCTAALEMAALLLDIQPGDEVIMPS   78 (376)
T ss_pred             CCHHHHHHHHHHHHcCCccCCcH--HHHHHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence            34566788888887643311111  1245555555543    2    468999999999999999887 79999999999


Q ss_pred             CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631          141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS  220 (421)
Q Consensus       141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  220 (421)
                      ++|.++...+...|++++.+++++ +++.+|++++++++++++++|+   |+||+|...   ++++|.++|++||++||+
T Consensus        79 ~t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~---d~~~I~~la~~~~i~vIe  151 (376)
T TIGR02379        79 YTFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVAC---DMDTIMALANKHQLFVIE  151 (376)
T ss_pred             CCcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCcc---CHHHHHHHHHHCCCEEEE
Confidence            999999888999999999999865 3477999999999988888875   677899885   477999999999999999


Q ss_pred             cccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc------
Q 014631          221 DEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS------  291 (421)
Q Consensus       221 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------  291 (421)
                      |++|+.+. +.|...   ..+.    .+.+.||+  |.+ .+|.+.|++++++       +++.++++......      
T Consensus       152 Daa~~~g~~~~~~~~---g~~~----~~~~fSf~~~K~l-~~g~~gG~v~~~~-------~~~~~~~~~~~~~g~~~~~~  216 (376)
T TIGR02379       152 DAAQGVMSTYKGRAL---GSIG----HLGTFSFHETKNY-TSGGEGGALLIND-------QAFIERAEIIREKGTNRSQF  216 (376)
T ss_pred             ECccccCCccCCccc---CCCC----CEEEEeCCCCCcC-cccCCceEEEECC-------HHHHHHHHHHHHhCCCCccc
Confidence            99998865 444321   1111    13333443  664 5677889998865       34555554432210      


Q ss_pred             ----------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC--C-ccccCCCCc---e-e
Q 014631          292 ----------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP--C-ITCPRKPEG---S-M  348 (421)
Q Consensus       292 ----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g-~~~~~~~~~---~-~  348 (421)
                                      .-.+.+..+.+...|     ..+++..++-++..+...+.|.+++  + +.....+.+   . .
T Consensus       217 ~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~  291 (376)
T TIGR02379       217 FRGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAH  291 (376)
T ss_pred             cccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeE
Confidence                            011112211122223     3355555555555556666666543  2 221111211   1 2


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC----------CC------------CCeEEEEec--CCHHHHH
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV----------GM------------KNWLRITFA--IEPSALE  404 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------~~------------~~~iRi~~~--~~~e~l~  404 (421)
                      ++++.++..     .+-.++. ..|+++||.+.++...          ..            ...+.+-+.  .++++++
T Consensus       292 ~~~i~~~~~-----~~r~~l~-~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~  365 (376)
T TIGR02379       292 MFYIKLKDE-----DDRNELI-KYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQA  365 (376)
T ss_pred             EEEEEECCc-----CCHHHHH-HHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHH
Confidence            334555431     1233444 4557889987743211          00            123444444  5789999


Q ss_pred             HHHHHHHHHH
Q 014631          405 EGLGRIKAFC  414 (421)
Q Consensus       405 ~~~~~l~~~~  414 (421)
                      .+++.|++++
T Consensus       366 ~i~~~i~~~~  375 (376)
T TIGR02379       366 RVIQTICDYL  375 (376)
T ss_pred             HHHHHHHHHh
Confidence            9999998864

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.92  E-value=2.9e-22  Score=189.45  Aligned_cols=217  Identities=18%  Similarity=0.195  Sum_probs=159.6

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEee
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHF  160 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~  160 (421)
                      .....+|++.++++.+        .+++++++|+++|+.+++.+++++||+|++++|.|.++..    .+...|+++..+
T Consensus        64 ~pt~~~Le~~lA~l~g--------~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v  135 (394)
T PRK07050         64 TPTSLALAQRLAEIEG--------GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFY  135 (394)
T ss_pred             CHHHHHHHHHHHHHhC--------CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEE
Confidence            3446889999999873        4689999999999999999999999999999999998663    456678888876


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      +..       +.+++++.+++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|....+    ..++ ..
T Consensus       136 d~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~----~~~l-~~  200 (394)
T PRK07050        136 DPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLA----FKPF-EH  200 (394)
T ss_pred             CCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccccc----cCHH-Hc
Confidence            531       4467888888899999999999999766   8899999999999999999999976331    1121 11


Q ss_pred             CCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      +   ..+++.|++|.++. .+.+.|++++.+       +++.+++...... ..+.++.....+...|+.     +..+.
T Consensus       201 G---aDi~v~S~tK~~~g~~~~~gG~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t-----l~~Rl  265 (394)
T PRK07050        201 G---VDISVQALTKYQSGGSDVLMGATITAD-------AELHAKLKLARMRLGIGVSADDCSLVLRGLPS-----LQVRL  265 (394)
T ss_pred             C---CeEEEEECCceecCCCCeeEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc-----HHHHH
Confidence            2   23889999999753 345689888754       3466666555432 334555554443333322     44456


Q ss_pred             HHHHHHHHHHHHHhhcCCCcc
Q 014631          319 DILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      ++..++...+.+.|+++|.+.
T Consensus       266 ~~~~~~a~~la~~L~~~p~v~  286 (394)
T PRK07050        266 AAHDRSALEVAEWLKARPEIA  286 (394)
T ss_pred             HHHHHHHHHHHHHHHhCCCcc
Confidence            666677778888888877655

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.91  E-value=4.2e-22  Score=204.24  Aligned_cols=339  Identities=14%  Similarity=0.100  Sum_probs=226.1

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCC-CCCC----CCCCHHHHHHHHHHHhhhCCCCCCCC--cEEEcC
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFD-CYSP----SVGILPARRAIADYLNSELPCKLSPD--DVYLTA  116 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~-~y~~----~~g~~~l~~~ia~~l~~~~~~~~~~~--~i~~~~  116 (421)
                      +++|+.+..+    ++.+..+.+++.+.....  +.+ .|..    ..-+.+.|+.++++++      ++++  +|+||+
T Consensus        35 ~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lg------a~~~~~~VvFts  104 (805)
T PLN02724         35 VVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFN------APPSDYACVFTS  104 (805)
T ss_pred             CEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhC------CCccceEEEEeC
Confidence            7899988755    234456666666655431  111 1111    1235688888888873      4454  589999


Q ss_pred             CHHHHHHHHHHHh-cCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCC------CCccCCH--HHHHhhh-----
Q 014631          117 GCKQAIQVILTVL-ARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPE------KGWEVDL--DGLEALA-----  179 (421)
Q Consensus       117 g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~------~~~~~d~--e~l~~~~-----  179 (421)
                      |+|+++++++.++ .++||+|++..-.|.+...   .++..|+++..++++..      ....+++  +++++.+     
T Consensus       105 naT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~  184 (805)
T PLN02724        105 GATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ  184 (805)
T ss_pred             ChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence            9999999999987 6789999998888876543   34456889988887521      1112332  5565543     


Q ss_pred             -----ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc-----CcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          180 -----DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL-----GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       180 -----~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                           .++++++.+++.+|.||.++|.+.++++.+.++.+     ++++++|.+++.    |....++..++.+   +++
T Consensus       185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~D---fl~  257 (805)
T PLN02724        185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPAD---FVV  257 (805)
T ss_pred             cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCCC---EEE
Confidence                 13567889999999999999877555444433332     368999999987    5555566666554   888


Q ss_pred             cccccccC-CCCceEEEEEeeCCCcchhHHHHHHHHhhh-------------------------cccccCCchHHHHHHH
Q 014631          250 GSMSKRWI-VPGWRLGWLVTSDPSGILQELRIVDSIKGY-------------------------LNISSGPATFVQGAVP  303 (421)
Q Consensus       250 ~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~  303 (421)
                      .|++|+|| ..|  +|++++++        ++.+.+...                         +...++++.....++.
T Consensus       258 ~S~HK~~GgP~G--~G~L~vr~--------~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~  327 (805)
T PLN02724        258 VSFYKIFGYPTG--LGALLVRR--------DAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR  327 (805)
T ss_pred             EecceeccCCCC--ceEEEEeh--------hhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence            89999987 335  79999864        222222211                         1113467777777777


Q ss_pred             HHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC------CccccCCCC--------ceeEEEEecCcccccCCCChHHHH
Q 014631          304 QIFKNTKEDFFSKIVDILRDTADICYDRIKEIP------CITCPRKPE--------GSMFVMVKLNLSLLEGISDDMEFA  369 (421)
Q Consensus       304 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  369 (421)
                      ++++.....+++.+.++.+.+.+++.+.|++++      ++. ++.+.        .+..+.+.+....  +..-....+
T Consensus       328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~-iyg~~~~~~~~~~r~~ivsFnv~~~~--~~~v~~~~v  404 (805)
T PLN02724        328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCV-LYGNHTFKLEFHIQGPIVTFNLKRAD--GSWVGHREV  404 (805)
T ss_pred             HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEE-EcCCCCCCCCcccccCEEEEEEEcCC--CCEeCHHHH
Confidence            777764445678889999999999999999875      465 33332        1233333343211  000123445


Q ss_pred             HHHHhhcCeeEEeCCCCCC-----------------------------------CCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          370 LQLAKEESVIVLPGMAVGM-----------------------------------KNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       370 ~~ll~~~gv~v~~g~~~~~-----------------------------------~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      ..++.++||.++.|..|..                                   .+.+|+|++  ++.+|++++++.|++
T Consensus       405 ~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~  484 (805)
T PLN02724        405 EKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS  484 (805)
T ss_pred             HHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence            6677888999999987641                                   267999998  899999999999999


Q ss_pred             HH
Q 014631          413 FC  414 (421)
Q Consensus       413 ~~  414 (421)
                      ..
T Consensus       485 ~~  486 (805)
T PLN02724        485 SF  486 (805)
T ss_pred             Hh
Confidence            65

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.91  E-value=9.7e-22  Score=187.33  Aligned_cols=227  Identities=15%  Similarity=0.128  Sum_probs=161.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~  162 (421)
                      ....|++.++++.+        .+..++++||++|+..++..++++||+|+++.+.|.+..    ..+...|++++.++.
T Consensus        65 ~~~~Le~~lA~leg--------~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~  136 (431)
T PRK08248         65 TTDVFEKRIAALEG--------GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP  136 (431)
T ss_pred             hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence            35789999999873        357788999999999999888999999999999997643    345668988888864


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                             .|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|+.    +....++ .++ 
T Consensus       137 -------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl-~~g-  200 (431)
T PRK08248        137 -------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI-EHG-  200 (431)
T ss_pred             -------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh-HcC-
Confidence                   3789999999889999999999999999966   67889999999999999999863    2122222 223 


Q ss_pred             CCCEEEEcccccccCCCCceEEEEEeeCCCcchh---------------------H----HHH-HHHHhhh-cccccCCc
Q 014631          243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ---------------------E----LRI-VDSIKGY-LNISSGPA  295 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~---------------------~----~~~-~~~~~~~-~~~~~~~~  295 (421)
                        ..+++.|++|.++++|.++|++++...+....                     .    +.. .+..... .......+
T Consensus       201 --aDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~  278 (431)
T PRK08248        201 --ADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS  278 (431)
T ss_pred             --CCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCC
Confidence              23888999999999999999988753321100                     0    000 0111011 11223444


Q ss_pred             hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          296 TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      +.....+..-|+     -+..+.++..++...+.+.|+++|++..+..|
T Consensus       279 p~~a~l~~rgl~-----tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yP  322 (431)
T PRK08248        279 PFNSFLLLQGLE-----TLHLRMERHSENALAVAKFLEEHEAVEWVSYP  322 (431)
T ss_pred             HHHHHHHhcCcC-----cHHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence            444444433333     25666778888999999999998876534343

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.91  E-value=8.4e-22  Score=188.16  Aligned_cols=159  Identities=23%  Similarity=0.181  Sum_probs=129.6

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~  161 (421)
                      ....+|++.+|++.+        .+..+++++|++|+..++.+++++||+|+++.+.|.+..    ..+...|++++.++
T Consensus        57 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~  128 (418)
T TIGR01326        57 PTTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVD  128 (418)
T ss_pred             hhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence            335799999999973        246788999999999999988999999999999997643    34567898888876


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      .       .|++++++.+++++++|++.+|+||+|.+.   ++++|.++|+++|+++|+|++|+...    ...++ .  
T Consensus       129 ~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~---dl~~I~~la~~~~i~livD~t~~~~~----~~~~l-~--  191 (418)
T TIGR01326       129 P-------DDPEEFEKAIDENTKAVFAETIGNPAINVP---DIEAIAEVAHAHGVPLIVDNTFATPY----LCRPI-D--  191 (418)
T ss_pred             C-------CCHHHHHHhcCcCCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCchhh----cCCch-h--
Confidence            3       178999999988899999999999999995   48899999999999999999997531    11111 1  


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                       .+..+++.|+||.++++|.|+|+++++.
T Consensus       192 -~g~Divv~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       192 -HGADIVVHSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             -cCCeEEEECccccccCCccceEEEEEec
Confidence             2245889999999999999999999864

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.91  E-value=9.4e-22  Score=185.29  Aligned_cols=282  Identities=16%  Similarity=0.152  Sum_probs=190.2

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~  163 (421)
                      ..+|++.++++++      .  ++++++++++.+++.++. ++++||+|+++++.|.++..    .+...|++++.++. 
T Consensus        49 ~~~le~~la~l~g------~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-  118 (378)
T TIGR01329        49 RTALESLLAKLDK------A--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT-  118 (378)
T ss_pred             HHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-
Confidence            4677777777762      2  466667777789998776 67999999999999987654    34557999888764 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                            .|++++++.++++++++++++|+||+|.+.   ++++|+++|+++|+++|+|++|....    ...++ .++. 
T Consensus       119 ------~d~~~le~~i~~~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~----~~~~l-~~g~-  183 (378)
T TIGR01329       119 ------TDLDKVKAALGPKTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPL----LCNPL-ELGA-  183 (378)
T ss_pred             ------CCHHHHHHhcCcCceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCcccc----cCChh-hcCC-
Confidence                  278999999988999999999999999995   59999999999999999999985422    12233 2232 


Q ss_pred             CCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          244 VPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                        .+++.|++|.++.+ +...|++++++       +++.+++..... ...+.++.....+...+     ..+..+.++.
T Consensus       184 --Di~v~S~tK~l~G~~~~~~G~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l-----~tl~~R~e~~  249 (378)
T TIGR01329       184 --DIVYHSATKFLAGHSDVMAGVLAVKG-------EEIAKKVYFLQNSTGSGLAPFDCWLLLRGI-----KTLAIRIEKQ  249 (378)
T ss_pred             --cEEEEecceeccCCccceeEEEEeCc-------HHHHHHHHHHHHhcCCcCCHHHHHHHHccC-----CCHHHHHHHH
Confidence              28889999987654 46789998854       234455554433 22234444433322222     3356667777


Q ss_pred             HHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC
Q 014631          322 RDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA  385 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~  385 (421)
                      .++...+.+.|+++|.+..+..|.                .+..+.+.+..     .....+++..| +..++.++-|..
T Consensus       250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~-----~~~~~~~~~~L-~~~~i~~s~G~~  323 (378)
T TIGR01329       250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS-----VALSKRLVEAT-KLFSITVSFGSV  323 (378)
T ss_pred             HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-----HHHHHHHHHhC-cCcccccCCCCC
Confidence            788888888888776543222221                12344445521     11245676665 777877777654


Q ss_pred             CC----------------------C-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          386 VG----------------------M-KNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       386 ~~----------------------~-~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                      ..                      . ++.+|+|++..  +.+.+++.|.+++.+
T Consensus       324 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~  375 (378)
T TIGR01329       324 NSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE--DVDDLISDLDIAFVT  375 (378)
T ss_pred             CceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence            21                      0 35799999853  566667777777764

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.91  E-value=6.9e-22  Score=174.83  Aligned_cols=315  Identities=17%  Similarity=0.205  Sum_probs=212.7

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK  140 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~  140 (421)
                      .+.|++.++|.++-..+ ...|+..+....+++.+++.++        .+.++|+++||+++.+++.+.++||+.|++..
T Consensus        11 g~~~~m~eam~~a~~~~-~~~YG~D~~~~~~e~~~ae~~g--------~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~   81 (342)
T COG2008          11 GPTPEMREALAAANAVG-DDVYGEDPTTNALEQRIAELFG--------KEAALFVPSGTQANQLALAAHCQPGESVICHE   81 (342)
T ss_pred             CCCHHHHHHHHhccccC-CCCCCCCHHHHHHHHHHHHHhC--------CceEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence            56789999998875322 3479888777888888888873        27899999999999999999999999999999


Q ss_pred             CCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014631          141 PGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR  212 (421)
Q Consensus       141 p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~  212 (421)
                      -+|....  .....++ ....++..+..+..+++|+++..+++      .+..+++.+.+|..|+++|.+++++|.++|+
T Consensus        82 ~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k  160 (342)
T COG2008          82 TAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCK  160 (342)
T ss_pred             cccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHH
Confidence            8886542  2223333 23344555556678999999997653      2455666666668899999999999999999


Q ss_pred             hcCcEEEEcccccccc--cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc
Q 014631          213 KLGIMVISDEVYDHLT--FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI  290 (421)
Q Consensus       213 ~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (421)
                      ++|+.|+.|.+--...  ..|   ++...+...-.+++ .++||..+.+   +|.++..+       .++++++...+..
T Consensus       161 ~~~l~LHmDGAR~~nA~valg---~~~~~~~~~~D~v~-~~~tK~g~~~---~gAiv~gn-------~~~~~~a~~~rK~  226 (342)
T COG2008         161 EHGLPLHMDGARLANALVALG---VALKTIKSYVDSVS-FCLTKGGGAP---VGAIVFGN-------RDFAKRARRWRKR  226 (342)
T ss_pred             HhCCceeechHHHHHHHHHcC---CCHHHHHhhCCEEE-EecccCCcce---eeeEEEcC-------HHHHHHHHHHHHH
Confidence            9999999998853322  222   23333332223344 4689995555   48877754       4566666554322


Q ss_pred             c---cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHH
Q 014631          291 S---SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDME  367 (421)
Q Consensus       291 ~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (421)
                      .   .....+..+....+|++   ........+-+.+...+.+.|...||+. +..|..++.+++.++...         
T Consensus       227 ~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~~tN~vf~~l~~~~---------  293 (342)
T COG2008         227 AGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVK-LAFPVETNMVFVRLPESA---------  293 (342)
T ss_pred             hcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCCcccEEEEECChHH---------
Confidence            1   12233444444455543   3344445566667888999999888998 446666788888887431         


Q ss_pred             HHHHHHhhcCeeEEeCCCCCCC-CeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          368 FALQLAKEESVIVLPGMAVGMK-NWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       368 ~~~~ll~~~gv~v~~g~~~~~~-~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                       ...+ +..|.....|..-... ..+|+..+  ++++++++++..+++++
T Consensus       294 -i~~l-~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         294 -IEAL-RLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             -HHHH-HhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence             1222 2233333332221112 47899887  88999999999998764

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.91  E-value=4.6e-21  Score=181.52  Aligned_cols=338  Identities=12%  Similarity=0.106  Sum_probs=218.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|++++||..|....+.+ ..+|.+.+++.+++.+... .+  ...+.+.+..+++++.+..    ..+.++++++|++|
T Consensus        34 dG~~~lD~~sg~~~~~lG-h~~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA  105 (395)
T PRK03715         34 NGKRYLDFIQGWAVNCLG-HCNPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA  105 (395)
T ss_pred             CCCEEEECCcChhhccCC-CCCHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence            588999998875444343 3479999999999876321 12  2234678888899986532    24689999999999


Q ss_pred             HHHHHHHhc------CCC-CeEEEcCCCCcchHHHHhhc-CceeE---eeeccCCCC--ccCCHHHHHhhhccCceEEEE
Q 014631          122 IQVILTVLA------RPG-ANILLPKPGFPLYEANARHT-RLEIR---HFDLLPEKG--WEVDLDGLEALADENTVAMVI  188 (421)
Q Consensus       122 l~~~~~~l~------~~g-d~Vl~~~p~y~~~~~~~~~~-g~~~~---~~~~~~~~~--~~~d~e~l~~~~~~~~~~i~~  188 (421)
                      +..+++...      ++| .+|+..+.+|++....+... |....   +.|..+.-.  .-.|++++++.+.+++.++++
T Consensus       106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~  185 (395)
T PRK03715        106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML  185 (395)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence            999998774      134 57888899998875444332 32111   111110000  013788998888766666655


Q ss_pred             eCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          189 VNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       189 ~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      ...++..|... |++.+++|.++|++||+++|+||+|+++.+.|..+. ...++...+   +.+++|.++ .|+++|.++
T Consensus       186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD---i~t~gK~lg-~G~p~~av~  260 (395)
T PRK03715        186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD---IMTLGKGIG-GGVPLAALL  260 (395)
T ss_pred             eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc---eeeehhhhh-CCcceEEEE
Confidence            54466777764 688899999999999999999999998877776432 122222222   347889975 579999998


Q ss_pred             eeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC---CCccccCC
Q 014631          268 TSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI---PCITCPRK  343 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~~~~~~  343 (421)
                      +++        ++.. +... ...+.+.+++..+++.++|+...+   ++..++.+++.+++.+.|+++   .++..+  
T Consensus       261 ~~~--------~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v--  326 (395)
T PRK03715        261 AKA--------EVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE--  326 (395)
T ss_pred             Ecc--------cccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE--
Confidence            853        2321 2111 123446778888888888865322   234555556666666666542   134312  


Q ss_pred             CCceeEEEEecCcccccCCCChHHHHHHHHhhc---CeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE---SVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ...|.+..+.+...      ....+ ...+.+.   ||.+.+..    .+.+|++++  .+++++++++++|.++++++
T Consensus       327 rG~Glm~~i~l~~~------~~~~~-~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        327 RGEGLLRALLLGKD------IGPQI-VEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             EcceeEEEEEecCc------hHHHH-HHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            23366777777531      11222 2333445   99986532    368999998  79999999999999998764

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.91  E-value=7e-21  Score=181.71  Aligned_cols=334  Identities=15%  Similarity=0.069  Sum_probs=206.6

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHH-hcCCC----CC-CCCCCCCHHHHH----HHHHHHhhhCCCCCCCCcEE
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAV-RSAEF----DC-YSPSVGILPARR----AIADYLNSELPCKLSPDDVY  113 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~-~~~~~----~~-y~~~~g~~~l~~----~ia~~l~~~~~~~~~~~~i~  113 (421)
                      .+.+++-..+      -..+|.+++++...+ .+...    .+ |+..+.+.+|++    .++++++      . ...++
T Consensus        28 ~~~~~l~~se------n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g------~-~~alv   94 (416)
T PRK13034         28 QDHLELIASE------NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG------C-DYANV   94 (416)
T ss_pred             hcCeeecccc------cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC------C-CceEE
Confidence            4556665443      145799999998885 33211    11 111233678887    7777763      1 23335


Q ss_pred             EcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch-HHHHhh--cCcee--EeeeccCCCCccCCHHHHHhhhcc-CceEEE
Q 014631          114 LTAGCKQAIQVILTVLARPGANILLPKPGFPLY-EANARH--TRLEI--RHFDLLPEKGWEVDLDGLEALADE-NTVAMV  187 (421)
Q Consensus       114 ~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~--~g~~~--~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~  187 (421)
                      ++++|+.|+..++.++++|||+|+++..+|.+. ...++.  .+...  ..+++++. .+.+|++++++.+.. ++++|+
T Consensus        95 ~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~klVi  173 (416)
T PRK13034         95 QPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEHKPKLII  173 (416)
T ss_pred             ecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhcCCeEEE
Confidence            568889999999999999999999999999762 222221  12221  23444322 345899999987743 567776


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +..+.  +|..   .++.+|.++|++||+++|+|++|+...+....  ....++  .-.++++|+||+++.+.  .|+++
T Consensus       174 ~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~--~~~~~~--~~Di~~~s~~K~l~g~~--GG~v~  242 (416)
T PRK13034        174 AGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGE--HPNPFP--HAHVVTTTTHKTLRGPR--GGMIL  242 (416)
T ss_pred             ECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCC--CCCCCC--CceEEEEeCcccCCCCC--CeEEE
Confidence            55554  4555   56888888999999999999999876543211  111111  12378899999974332  37777


Q ss_pred             eeCCCcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-
Q 014631          268 TSDPSGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-  344 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-  344 (421)
                      +++       +.+.+.++.....  .+++++....++...+.........+.++++.++.+++++.|.+. |+.+. .+ 
T Consensus       243 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~-~~~  313 (416)
T PRK13034        243 TND-------EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLV-SGG  313 (416)
T ss_pred             ECc-------HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEec-cCC
Confidence            653       2344444433221  122333333333323322112233466789999999999999987 88743 32 


Q ss_pred             CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC------CCCCCCeEEEEec------CCHHHHHHHHHHHHH
Q 014631          345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM------AVGMKNWLRITFA------IEPSALEEGLGRIKA  412 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------~~~~~~~iRi~~~------~~~e~l~~~~~~l~~  412 (421)
                      ..+...++.+....     .....+...|+++||.+.+-.      ....+..+|++++      ++++|++++++.|.+
T Consensus       314 ~~t~i~~v~~~~~~-----~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~  388 (416)
T PRK13034        314 TDNHLLLVDLRPKG-----LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD  388 (416)
T ss_pred             CCCcEEEEEcCCCC-----CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence            34566666665421     133344345578899997521      1222567999975      458999999999998


Q ss_pred             HHHH
Q 014631          413 FCQR  416 (421)
Q Consensus       413 ~~~~  416 (421)
                      ++.+
T Consensus       389 ~~~~  392 (416)
T PRK13034        389 VLDD  392 (416)
T ss_pred             HHhc
Confidence            8764

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.91  E-value=3.3e-21  Score=182.26  Aligned_cols=315  Identities=13%  Similarity=0.111  Sum_probs=203.6

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCC
Q 014631           63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKP  141 (421)
Q Consensus        63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p  141 (421)
                      .+.-.+++.+.+..+.. .+++  ...+|++.++++++      .  +.+++++|+++|+.+++.++ +++||+|+++++
T Consensus        13 ~~~e~~~~~~~l~~~~~-~~g~--~~~~le~~la~~~g------~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~   81 (379)
T PRK11658         13 GDEELAAVKEVLRSGWI-TTGP--KNQALEQAFCQLTG------N--QHAIAVSSATAGMHITLMALGIGPGDEVITPSL   81 (379)
T ss_pred             CHHHHHHHHHHHHcCCc-cCCH--hHHHHHHHHHHHhC------C--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCC
Confidence            45567888888776432 3333  36899999999984      2  36788999999999999998 799999999999


Q ss_pred             CCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631          142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD  221 (421)
Q Consensus       142 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  221 (421)
                      +|.++...+...|++++.+++++ +++.+|++++++.+++++++|+   |+|++|..   .++++|.++|+++|+++|+|
T Consensus        82 ~~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~---~d~~~i~~~a~~~gi~vi~D  154 (379)
T PRK11658         82 TWVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAP---ADLDAIRAIGERYGIPVIED  154 (379)
T ss_pred             cHHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCc---CCHHHHHHHHHHcCCeEEEE
Confidence            99999888999999999999864 3467899999999988888876   66679988   45788999999999999999


Q ss_pred             ccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc---------
Q 014631          222 EVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS---------  291 (421)
Q Consensus       222 e~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  291 (421)
                      ++|+... +.|.   .+..   ..  +.+.||++...+++.+.|+++.++       +++.++++......         
T Consensus       155 ~a~a~g~~~~~~---~~g~---~g--~~~~Sf~~~K~l~~g~GG~v~~~~-------~~~~~~~~~~~~~G~~~~~~~~~  219 (379)
T PRK11658        155 AAHAVGTYYKGR---HIGA---RG--TAIFSFHAIKNITCAEGGLVVTDD-------DELADRLRSLKFHGLGVDAFDRQ  219 (379)
T ss_pred             CCCccCCeECCe---ecCC---CC--CEEEeCCCCCcCcccCceEEEECC-------HHHHHHHHHHHHcCCCcchhhhh
Confidence            9998532 3221   1111   11  134566655455666788888754       23444444322100         


Q ss_pred             ------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc----e-eEEEEec
Q 014631          292 ------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG----S-MFVMVKL  354 (421)
Q Consensus       292 ------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~----~-~~~~~~~  354 (421)
                                  .+.+. -...+.+++.......+++..++.+++.+.+.+.|++++... +..|..    + ..+.+.+
T Consensus       220 ~~~~~~~~~~~~~G~n~-~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~  297 (379)
T PRK11658        220 TQGRAPQAEVLTPGYKY-NLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQP-LSLPAWPHQHAWHLFIIRV  297 (379)
T ss_pred             cccCCCcceeecccccc-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CcCCCCCCceeEEEEEEEE
Confidence                        00000 000111222211235577778888888888899998875433 212221    2 1222334


Q ss_pred             CcccccCCCChHHHHHHHHhhcCeeEEeCCC-------CC----C----------CCeEEEEec--CCHHHHHHHHHHHH
Q 014631          355 NLSLLEGISDDMEFALQLAKEESVIVLPGMA-------VG----M----------KNWLRITFA--IEPSALEEGLGRIK  411 (421)
Q Consensus       355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------~~----~----------~~~iRi~~~--~~~e~l~~~~~~l~  411 (421)
                      +....  ..+..++... |+++||.+.....       |.    .          ...+-+-++  .++++++.+++.|+
T Consensus       298 ~~~~~--~~~r~~~~~~-L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~  374 (379)
T PRK11658        298 DEERC--GISRDALMEA-LKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQ  374 (379)
T ss_pred             CCccc--cCCHHHHHHH-HHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHH
Confidence            32100  0123455555 4778987653210       00    0          123444443  57899999999999


Q ss_pred             HHHH
Q 014631          412 AFCQ  415 (421)
Q Consensus       412 ~~~~  415 (421)
                      +++.
T Consensus       375 ~~~~  378 (379)
T PRK11658        375 QIAG  378 (379)
T ss_pred             HHHh
Confidence            8753

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.91  E-value=3.6e-21  Score=175.57  Aligned_cols=348  Identities=16%  Similarity=0.113  Sum_probs=233.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..||||..+....-. -..+|.|.+|+++++.++  ..|+.+   .+++-.+|+++.++++   ..+.|-+++++|+
T Consensus        50 vDGn~YIDy~~~~Gp~il-GH~~p~V~~Av~~~l~~G--~~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTE  120 (432)
T COG0001          50 VDGNEYIDYVLGWGPLIL-GHAHPAVVEAVQEQLERG--LSFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTE  120 (432)
T ss_pred             CCCCEeeehhccCccccc-CCCCHHHHHHHHHHHHhc--CCCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhH
Confidence            458899999988744322 357888999999999986  357654   3777788888877654   3489999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHh-hcCceeEe--------eeccCC-----CCccCCHHHHHhhhccC--
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYEANAR-HTRLEIRH--------FDLLPE-----KGWEVDLDGLEALADEN--  182 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~--------~~~~~~-----~~~~~d~e~l~~~~~~~--  182 (421)
                      |...+++...  ..-|+|+..+.+|+++...+. ..|...-.        +|....     -.|+ |++.+++++.+.  
T Consensus       121 AtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-D~~al~~~~~~~g~  199 (432)
T COG0001         121 ATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-DLEALEEAFEEYGD  199 (432)
T ss_pred             HHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-CHHHHHHHHHHcCC
Confidence            9999987653  123899999999998754443 22211110        110000     0011 889999988653  


Q ss_pred             ceEEEEeCC--CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631          183 TVAMVIVNP--GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       183 ~~~i~~~~p--~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  259 (421)
                      ..+.+|+.|  .| -|.+. .++.++.|.++|++||+++|.||+..+|...-.+......+.++     +.++.|. ...
T Consensus       200 ~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGG  272 (432)
T COG0001         200 DIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGG  272 (432)
T ss_pred             cEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcC
Confidence            455677777  45 66654 55669999999999999999999999987653334444455544     5588999 578


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhhcc----cccCCchHHHHHHHHHhhccch--hHHHHHHHHHHHHHHHHHHHhh
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN----ISSGPATFVQGAVPQIFKNTKE--DFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      |+++|.+.++        .++++.+.....    .+.+.|+++..|..+.++....  ..+++..+.-.++++-+.+.+.
T Consensus       273 GlP~ga~gGr--------~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~  344 (432)
T COG0001         273 GLPIGAFGGR--------AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAE  344 (432)
T ss_pred             CcceeeeccH--------HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999985        578887765442    3567888999998888875332  2355555555555556666666


Q ss_pred             cCCCccccCCCCceeEEEEecCcccc-------cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLL-------EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG  406 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~  406 (421)
                      +. ++.......+++|..+-.+....       .+......++.++ .++||++.|+.+    ...=+|..+++++|++.
T Consensus       345 ~~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~-l~~GV~l~ps~~----ea~flS~ahte~di~~~  418 (432)
T COG0001         345 RH-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHL-LNRGVYLAPSQF----EAGFLSTAHTEEDIDRT  418 (432)
T ss_pred             Hh-CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHH-HhCCcccCCccc----cceeeecccCHHHHHHH
Confidence            55 55532234445443322221100       0111133555555 557999998653    34467777999999999


Q ss_pred             HHHHHHHHHHhhh
Q 014631          407 LGRIKAFCQRHAK  419 (421)
Q Consensus       407 ~~~l~~~~~~~~~  419 (421)
                      ++++.++++++..
T Consensus       419 ~~a~~~~~~~~~~  431 (432)
T COG0001         419 LEAADEAFKELAG  431 (432)
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999988754

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.91  E-value=4.8e-22  Score=185.77  Aligned_cols=286  Identities=19%  Similarity=0.168  Sum_probs=189.0

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP  164 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~  164 (421)
                      .+...+|+++++++.+        .+++++++|+++|+.+++. ++++||+|+++.+.|.+....+....... .+..  
T Consensus        53 ~p~~~~le~~lA~leg--------~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~~~~--  120 (364)
T PRK07269         53 NPTRAKLEETLAAIES--------ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG-RFHF--  120 (364)
T ss_pred             CccHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-cEEE--
Confidence            3447899999999973        5689999999999999984 56899999999999976554433211100 0111  


Q ss_pred             CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       165 ~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                        .+..|++++++.+++++++|++++|+||||.+   .++++|+++|+++|+++|+|++|....+    ..++ ....+ 
T Consensus       121 --~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~---~di~~I~~la~~~gi~vvvD~t~~~~~~----~~pl-~~gaD-  189 (364)
T PRK07269        121 --TYANTEEELIAAIEEDTDIVYIETPTNPLMVE---FDIEKVAKLAHAKGAKVIVDNTFYSPIY----QRPI-ELGAD-  189 (364)
T ss_pred             --EecCCHHHHHHhcCcCceEEEEECCCCCCCee---eCHHHHHHHHHHcCCEEEEECCCccccc----CCch-hhCCc-
Confidence              12358899999998899999999999999988   4799999999999999999999754221    1122 22222 


Q ss_pred             CEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631          245 PVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILR  322 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  322 (421)
                        +++.|++|.++..|- -.|++++++       +++.+++...... ....+++....+...|+.     ++.+.++.+
T Consensus       190 --ivv~S~tK~l~g~~d~~gG~v~~~~-------~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-----L~~r~~~~~  255 (364)
T PRK07269        190 --IVLHSATKYLSGHNDVLAGVVVTND-------LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-----LSLRMERST  255 (364)
T ss_pred             --EEEecCceeccCCCcccceEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----HHHHHHHHH
Confidence              889999999875442 357777654       2455555433322 234566666555555543     677788888


Q ss_pred             HHHHHHHHHhhcCCCccccC-CCCceeEEEEecCcccccCCCChHHHHHH---------HHhhcCeeEEeCCCCCC----
Q 014631          323 DTADICYDRIKEIPCITCPR-KPEGSMFVMVKLNLSLLEGISDDMEFALQ---------LAKEESVIVLPGMAVGM----  388 (421)
Q Consensus       323 ~~~~~~~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------ll~~~gv~v~~g~~~~~----  388 (421)
                      ++...+.+.|+++|.+..+. ++.+|++. +.+...     .....|+..         +...+++++.|+..++.    
T Consensus       256 ~na~~~a~~L~~~p~v~~v~ypg~gg~~s-f~~~~~-----~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~  329 (364)
T PRK07269        256 ANAQEVVAFLKKSPAVKEVLYTGKGGMIS-FKVADE-----TRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPA  329 (364)
T ss_pred             HHHHHHHHHHHhCCCccEEeCCCcCcEEE-EEECCH-----HHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCH
Confidence            99999999999998875444 44555444 444311     011223222         22223445555443211    


Q ss_pred             ---------CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          389 ---------KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       389 ---------~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                               ++-+|+|++..  +.+.+++.|.++++
T Consensus       330 ~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al~  363 (364)
T PRK07269        330 EVRHSYGLTDDLLRLSIGIE--DARDLIADLKQALE  363 (364)
T ss_pred             HHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHhc
Confidence                     35799999963  55666677766653

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.91  E-value=3.4e-21  Score=183.49  Aligned_cols=226  Identities=19%  Similarity=0.165  Sum_probs=158.0

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----cCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----TRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~  161 (421)
                      +...+|++.++++.+        .+..+++++|++|+..++.+++++||+|+++.+.|.+....+..    .|.++..++
T Consensus        58 pt~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d  129 (425)
T PRK06084         58 PTNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA  129 (425)
T ss_pred             chHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence            335799999999873        23567788888999999999999999999999999865544432    455555553


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      .       .|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|+....    ..++ .++
T Consensus       130 ~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p~-~~g  194 (425)
T PRK06084        130 H-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRPF-EHG  194 (425)
T ss_pred             C-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChh-hcC
Confidence            2       3889999999888999999999999999976   78999999999999999999985321    1122 222


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH----------------------------HHHHh-h-hcccc
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI----------------------------VDSIK-G-YLNIS  291 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~----------------------------~~~~~-~-~~~~~  291 (421)
                      .   .+++.|++|.++++|.++|.+++.++....  .+.                            ..... . .....
T Consensus       195 a---Divv~S~tK~l~G~g~~~gG~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g  269 (425)
T PRK06084        195 A---DIVVHSLTKYIGGHGTSIGGIVVDSGKFPW--AEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMG  269 (425)
T ss_pred             C---CEEEECchhcccccccceeEEEEeCCccch--hhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcC
Confidence            2   288999999999999999887775321000  000                            00000 0 11122


Q ss_pred             cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ...++.....+..-|+     -+..+.++.+++...+.+.|+++|.+..+..|
T Consensus       270 ~~l~~~~a~l~lrgl~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP  317 (425)
T PRK06084        270 AALSPFNAFLILQGLE-----TLALRMERHTENALKVARYLQQHPQVAWVKYA  317 (425)
T ss_pred             CCCCHHHHHHHHcCcC-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            3444454444433343     36677778888999999999998876533333

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.90  E-value=9.2e-21  Score=179.23  Aligned_cols=312  Identities=18%  Similarity=0.240  Sum_probs=194.9

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCC
Q 014631           63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKP  141 (421)
Q Consensus        63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p  141 (421)
                      .+.-.+++.+.+..+..  |+.    .++++.+++++.+.+|    .+++++++|+++|+.+++..+ +++||+|+++.+
T Consensus        10 ~~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~   79 (375)
T PRK11706         10 VGTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSY   79 (375)
T ss_pred             CHHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCC
Confidence            34456777777766432  322    2444555554444333    468999999999999887765 689999999999


Q ss_pred             CCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631          142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD  221 (421)
Q Consensus       142 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  221 (421)
                      +|.++...+...|++++.++++++ ++.+|++++++.+++++++|+++   |++|..   .++++|.++|+++|+++|+|
T Consensus        80 t~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~~tk~i~~~---~~~G~~---~~~~~i~~la~~~~i~vIeD  152 (375)
T PRK11706         80 TFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPV---HYAGVA---CEMDTIMALAKKHNLFVVED  152 (375)
T ss_pred             CcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCCCCeEEEEe---CCCCCc---cCHHHHHHHHHHcCCEEEEE
Confidence            999999999999999999988643 46799999999998888988765   468877   45789999999999999999


Q ss_pred             ccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc--------
Q 014631          222 EVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI--------  290 (421)
Q Consensus       222 e~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------  290 (421)
                      ++|+.+. +.+.   ++..+.    .+.+.||+  |.+ .+|.+.+++..+        +++.+++......        
T Consensus       153 ~a~a~g~~~~~~---~~g~~~----~~~~~Sf~~~K~l-~~g~gG~~~~~~--------~~~~~~~~~~~~~g~~~~~~~  216 (375)
T PRK11706        153 AAQGVMSTYKGR---ALGTIG----HIGCFSFHETKNY-TAGEGGALLIND--------PALIERAEIIREKGTNRSQFF  216 (375)
T ss_pred             CccccccccCCe---eeecCc----CEEEEeCCCCccc-cccCCeEEEECC--------HHHHHHHHHHHHcCCCcchhh
Confidence            9999865 3332   222221    13445555  996 447666666542        2344443332210        


Q ss_pred             ----------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC--C-ccccCCCCc----eeEEEEe
Q 014631          291 ----------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP--C-ITCPRKPEG----SMFVMVK  353 (421)
Q Consensus       291 ----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g-~~~~~~~~~----~~~~~~~  353 (421)
                                ..+.+.......++.+. .....+++..++-+++.+.+.+.|++++  + +.....+.+    ..++++.
T Consensus       217 ~~~~~~~~~~~~g~~~~~~~~~aa~~~-~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (375)
T PRK11706        217 RGQVDKYTWVDIGSSYLPSELQAAYLW-AQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIK  295 (375)
T ss_pred             ccCCCcceeeecccccCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEE
Confidence                      01122211111111111 1123356666666777777888887765  2 331212221    2345565


Q ss_pred             cCcccccCCCChHHHHHHHHhhcCeeEEeCCCC----------C---C---------CCeEEEEec--CCHHHHHHHHHH
Q 014631          354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAV----------G---M---------KNWLRITFA--IEPSALEEGLGR  409 (421)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------~---~---------~~~iRi~~~--~~~e~l~~~~~~  409 (421)
                      ++..     .+..++.. .|.++||.+......          +   .         ...+-+-+.  .+++|++..++.
T Consensus       296 ~~~~-----~~r~~l~~-~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~  369 (375)
T PRK11706        296 LRDL-----EDRSALIN-FLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDT  369 (375)
T ss_pred             ECCc-----CCHHHHHH-HHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHH
Confidence            6431     12344544 457789987543210          0   0         123444333  578999999999


Q ss_pred             HHHHH
Q 014631          410 IKAFC  414 (421)
Q Consensus       410 l~~~~  414 (421)
                      |++++
T Consensus       370 i~~~~  374 (375)
T PRK11706        370 ILEFF  374 (375)
T ss_pred             HHHHh
Confidence            98864

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.90  E-value=1.5e-20  Score=177.33  Aligned_cols=342  Identities=12%  Similarity=0.045  Sum_probs=227.5

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      ++.|+|--..      -...+.+.+++...+.+....      .|+....+.+++....+...+.||  .+..+|-.- +
T Consensus        49 ~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~-S  119 (493)
T PRK13580         49 RSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPH-S  119 (493)
T ss_pred             hcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCC-C
Confidence            5667775443      245678888887776653222      344556677888888888888886  444555544 4


Q ss_pred             HHHHHHHHHHHhcCC-------------------------------CCeEEEcCCCCcchHHH---HhhcC--ceeEeee
Q 014631          118 CKQAIQVILTVLARP-------------------------------GANILLPKPGFPLYEAN---ARHTR--LEIRHFD  161 (421)
Q Consensus       118 ~~~al~~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~~~---~~~~g--~~~~~~~  161 (421)
                      |+.|+..++.++++|                               ||+|+..++.+.++...   ....|  .+...++
T Consensus       120 g~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~  199 (493)
T PRK13580        120 GADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYG  199 (493)
T ss_pred             cHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecc
Confidence            566777788888876                               79999987666443211   11122  4566666


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-cccc
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF  240 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~  240 (421)
                      ++++ ...+|.+++++.+.++++.++++..+|-++ ..   ++++|.++|+++|+++++|++|+.....+..... ....
T Consensus       200 vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~  274 (493)
T PRK13580        200 VDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV  274 (493)
T ss_pred             cCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC
Confidence            6543 346999999999998888888888877644 53   5888899999999999999999887665433210 0111


Q ss_pred             CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      .  ...++++|+||++.  |.+.|+++++        +++.+.+.... ...+++.++..++...++.......+.+.++
T Consensus       275 ~--~~D~vtgT~hKaL~--GP~GG~I~~~--------~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~  342 (493)
T PRK13580        275 P--HADIVTTTTHKTLR--GPRGGLVLAK--------KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQ  342 (493)
T ss_pred             C--CCcEEEeCChhhcc--CCCeEEEEec--------HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHH
Confidence            1  12378899999963  3345898885        35666664333 2234555555554444454322233466788


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC------CCeEE
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM------KNWLR  393 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~iR  393 (421)
                      ++.++.+.+.+.|.+. |+.++.....+..+++.+....     .....+.+.|.+.||.+.+-..+..      ...+|
T Consensus       343 ~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~-----~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR  416 (493)
T PRK13580        343 QVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG-----LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR  416 (493)
T ss_pred             HHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH-----HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence            9999999999999987 8874322345667777775421     1333455567889999986554432      46799


Q ss_pred             EEec------CCHHHHHHHHHHHHHHHHHh
Q 014631          394 ITFA------IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       394 i~~~------~~~e~l~~~~~~l~~~~~~~  417 (421)
                      |++.      .+++|++++++.|.++++..
T Consensus       417 Ig~~A~ttrg~teedi~~iad~l~~~l~~~  446 (493)
T PRK13580        417 LGTPALTTLGMGSDEMDEVAELIVKVLSNT  446 (493)
T ss_pred             eccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence            9976      25799999999999888643

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=3.9e-21  Score=181.66  Aligned_cols=228  Identities=15%  Similarity=0.158  Sum_probs=159.8

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~  162 (421)
                      ....|++.++++.+        ....+.+++|++|+.+++.+++++||+|+++.+.|.+....    +...|+++..+..
T Consensus        62 tv~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~  133 (432)
T PRK06702         62 TLAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP  133 (432)
T ss_pred             HHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence            36799999999973        24578899999999999998999999999999999876665    5778998888743


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                            .+|++++++++++++++|++.+|+||++.+++   +++|+++|+++|+++|+|+++..-.    -..++ .++.
T Consensus       134 ------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~----~~~pl-~~GA  199 (432)
T PRK06702        134 ------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY----LCQAF-EHGA  199 (432)
T ss_pred             ------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh----hCChh-hcCC
Confidence                  26889999999999999999999999999954   9999999999999999999985311    01111 2233


Q ss_pred             CCCEEEEcccccccC-----CCCceE-----EEEEeeCCCcch--------------hHHHHHH--HHhhhcccccCCch
Q 014631          243 TVPVITLGSMSKRWI-----VPGWRL-----GWLVTSDPSGIL--------------QELRIVD--SIKGYLNISSGPAT  296 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~-----~~G~r~-----G~~~~~~~~~~~--------------~~~~~~~--~~~~~~~~~~~~~~  296 (421)
                      +   |++.|+||.++     ++|.++     +|...++.....              .++++..  ..........+.++
T Consensus       200 D---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp  276 (432)
T PRK06702        200 N---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSP  276 (432)
T ss_pred             C---EEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCH
Confidence            2   88999999544     444443     333221111000              0011111  11112223346777


Q ss_pred             HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          297 FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      +....+...|+.     ++.+.++.+++...+.+.|+++|.+..+..|
T Consensus       277 ~~a~l~~rgL~T-----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP  319 (432)
T PRK06702        277 FNAYISNIGLET-----LHLRMERHSENALAVAKWLADHERIEWVNYP  319 (432)
T ss_pred             HHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence            777766666654     5566667779999999999988876534343

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.90  E-value=2.1e-21  Score=183.54  Aligned_cols=326  Identities=15%  Similarity=0.087  Sum_probs=210.6

Q ss_pred             eeeccCCCCCCCCCCCCcHH-HHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC-CHHHH
Q 014631           46 IIPLGHGDPSAFPCFRTTPV-AADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTA-GCKQA  121 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~-v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~-g~~~a  121 (421)
                      .++|+.|. .     ..++. +.+++.+..... . ...+  ..-+.+.|+.++++++    . .++++|++++ |+|.+
T Consensus        13 ~~~f~~Gp-~-----~~~~~~v~~a~~~~~~~~-~-hr~~~f~~~~~~~r~~l~~l~~----~-~~~~~v~~~~gs~T~~   79 (378)
T PRK03080         13 DPRFSSGP-C-----KKRPGWQLEALADALLGR-S-HRQKPVKALLKRVIEGTRELLS----L-PEGYEVGIVPGSDTGA   79 (378)
T ss_pred             CCCcCCCC-c-----CCChHHHHHHHHhhhccc-C-cCCHHHHHHHHHHHHHHHHHhC----C-CCCceEEEECCchHHH
Confidence            45676664 2     34455 889988654321 1 1111  1234577777777763    1 1345788775 89999


Q ss_pred             HHHHHHHhcCC-CCeEEEcCCCCcch-HH-HHhhcCc-eeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccc
Q 014631          122 IQVILTVLARP-GANILLPKPGFPLY-EA-NARHTRL-EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGN  197 (421)
Q Consensus       122 l~~~~~~l~~~-gd~Vl~~~p~y~~~-~~-~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~  197 (421)
                      ++.++..+.++ ++.|++ ...|..- .. .++..|. +++.++.++  +..+|+++++.     ++.+.+++..|.||.
T Consensus        80 ~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~--g~~~d~~~i~~-----~~~V~~~h~~t~tG~  151 (378)
T PRK03080         80 WEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADY--GSLPDLSAVDF-----DRDVVFTWNGTTTGV  151 (378)
T ss_pred             HHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCC--CCCCCHhhcCC-----CCCEEEEecCCccce
Confidence            99999998875 445544 4455442 32 2356788 888887643  33467666432     556889999999999


Q ss_pred             ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchh
Q 014631          198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQ  276 (421)
Q Consensus       198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~  276 (421)
                      ..|   +++|++  +++|+++++|.+++.    |....++...     .+++.|.+|+++. +|  +|++++++      
T Consensus       152 ~~p---i~~I~~--~~~g~~~vVDa~qs~----G~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~------  209 (378)
T PRK03080        152 RVP---VARWIG--ADREGLTICDATSAA----FALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSP------  209 (378)
T ss_pred             ecc---chhhcc--ccCCCeEEEeccccc----ccCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECH------
Confidence            976   666666  788999999999988    4444444443     2788899999765 56  79998863      


Q ss_pred             HHHHHHHHhhh-----------------------cc-cccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHH
Q 014631          277 ELRIVDSIKGY-----------------------LN-ISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDR  331 (421)
Q Consensus       277 ~~~~~~~~~~~-----------------------~~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~  331 (421)
                        ++.+++...                       .. ...+++.....++.++|+...+. +++.+.++.+++.+++++.
T Consensus       210 --~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~  287 (378)
T PRK03080        210 --RAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDW  287 (378)
T ss_pred             --HHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence              233332211                       00 11245555565656677654444 6888999999999999999


Q ss_pred             hhcCCCccccC-CCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHH
Q 014631          332 IKEIPCITCPR-KPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEG  406 (421)
Q Consensus       332 l~~~~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~  406 (421)
                      |++++++.... .+.  .+....+.++... + . .+.+++..+++ +|+.+..|......+.+|+|++  ++.+|++++
T Consensus       288 l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~-~-~-~~~~~~~~l~~-~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l  363 (378)
T PRK03080        288 AEKTPWATPLVADPATRSNTSVTLDFVDAQ-A-A-VDAAAVAKLLR-ENGAVDIEPYRDAPNGLRIWCGPTVEPADVEAL  363 (378)
T ss_pred             HHhCCCcccccCCccccCccEEEEEcCCch-H-H-HHHHHHHHHHH-cCCeeccccccCCCCcEEEecCCCCCHHHHHHH
Confidence            99886665321 121  2223444454200 0 0 13446666654 5888877653323578999998  899999999


Q ss_pred             HHHHHHHHHHhhhc
Q 014631          407 LGRIKAFCQRHAKQ  420 (421)
Q Consensus       407 ~~~l~~~~~~~~~~  420 (421)
                      ++.|+++++++++.
T Consensus       364 ~~al~~~~~~~~~~  377 (378)
T PRK03080        364 TPWLDWAFERLKAA  377 (378)
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999998887653

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.90  E-value=1e-20  Score=179.06  Aligned_cols=213  Identities=15%  Similarity=0.110  Sum_probs=150.5

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~  163 (421)
                      ..++++.+|++.+      .. +.+++ ++|+.++..++. ++++||+|+++++.|.+..    ..+...|++++.++..
T Consensus        56 ~~~le~~lA~l~g------~~-~~v~~-~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~  126 (390)
T PRK08064         56 REALEDIIAELEG------GT-KGFAF-ASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT  126 (390)
T ss_pred             HHHHHHHHHHHhC------CC-CeEEE-CCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC
Confidence            5799999999973      33 34554 555778888886 6789999999999998543    4455689988888642


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                             |++++++.+++++++|++++|+||||.+.   ++++|.++|+++|+++|+|++|.....    ..++ .++  
T Consensus       127 -------d~~~l~~~l~~~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~----~~~~-~~g--  189 (390)
T PRK08064        127 -------NLEEVAQNIKPNTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLL----QKPL-DLG--  189 (390)
T ss_pred             -------CHHHHHHhcCCCceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCcccc----cCch-hhC--
Confidence                   68899999988999999999999999994   588888999999999999999876431    1122 222  


Q ss_pred             CCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhccccc-CCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          244 VPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                       ..+++.|+||.++.+ |...|++++.+       +++.+.+......++ ..++.....+...+     ..+..+.++.
T Consensus       190 -~Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl-----~tl~~R~~~~  256 (390)
T PRK08064        190 -ADVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNSFGAVLGVQDCWLVLRGL-----KTLHVRLEHS  256 (390)
T ss_pred             -CcEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHccc-----CcHHHHHHHH
Confidence             237889999998643 45568777653       346666666554322 23333333222222     2355666777


Q ss_pred             HHHHHHHHHHhhcCCCcc
Q 014631          322 RDTADICYDRIKEIPCIT  339 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~  339 (421)
                      .++...+.+.|+++|.+.
T Consensus       257 ~~~a~~la~~L~~~~~v~  274 (390)
T PRK08064        257 SETANKIALYLQEHPKVQ  274 (390)
T ss_pred             HHHHHHHHHHHhcCCCcc
Confidence            788888888888776543

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.90  E-value=1.6e-20  Score=176.26  Aligned_cols=284  Identities=14%  Similarity=0.137  Sum_probs=188.1

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~  163 (421)
                      ...|++.+|++.+        .+++++++|+++|+..++.+++++||+|+++++.|.++...    ....|.++..++. 
T Consensus        52 ~~~lE~~lA~l~g--------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~-  122 (377)
T TIGR01324        52 HFALQDAMCELEG--------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP-  122 (377)
T ss_pred             HHHHHHHHHHHhC--------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC-
Confidence            4699999999873        35799999999999999999999999999999999876543    3456777666542 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                       .     +.+++++.+++++++|++.+|+||+|..   .++++|+++|+++|+++|+|++|+....    ..++ .++. 
T Consensus       123 -~-----~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~----~~pl-~~ga-  187 (377)
T TIGR01324       123 -L-----IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLL----FKPL-EHGV-  187 (377)
T ss_pred             -C-----CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccc----cCcc-ccCc-
Confidence             1     2378888898899999999999999888   7899999999999999999999987332    1122 2232 


Q ss_pred             CCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          244 VPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                        .+++.|++|.++.. +...|++++++        +..+.+..... ...+.++.....+...++     -+.-+.++.
T Consensus       188 --Divv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~-----tl~~R~~~~  252 (377)
T TIGR01324       188 --DISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGLR-----TLGVRLKQH  252 (377)
T ss_pred             --eEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhhh-----hHHHHHHHH
Confidence              38899999998754 46678887642        34444443222 223445544444444343     345556777


Q ss_pred             HHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC
Q 014631          322 RDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA  385 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~  385 (421)
                      .++...+.+.|+++|.+.-++.|.                .|..+.++++...   ......|++.+ +-.++.+.-|..
T Consensus       253 ~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~---~~~~~~~~~~l-~~~~~~~slG~~  328 (377)
T TIGR01324       253 QESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT---QKQVHAFLDHL-QLFGLGYSWGGY  328 (377)
T ss_pred             HHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC---HHHHHHHHHhC-CcceEeccCCCc
Confidence            778788888888877664333332                1334445564210   01133444443 433444332221


Q ss_pred             C------C-------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          386 V------G-------------MKNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       386 ~------~-------------~~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                      .      .             .++.+|+|++.+  +.+.+++.|.++++.
T Consensus       329 ~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE--~~~dl~~dl~~al~~  376 (377)
T TIGR01324       329 ESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE--NVDDLKADLKAGFEA  376 (377)
T ss_pred             cceeecCCCCCCHHHHHhccCCCCEEEEEeCCC--CHHHHHHHHHHHHhc
Confidence            0      0             125699999953  455666666666653

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK05939 hypothetical protein; Provisional

Probab=99.90  E-value=1.7e-20  Score=177.32  Aligned_cols=226  Identities=17%  Similarity=0.110  Sum_probs=156.8

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLP  164 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~  164 (421)
                      ...|++.++++.+        .+..+++++|+.|+..++.+++++||+|+++++.|.++.   ..+...|++++.++.  
T Consensus        49 ~~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~--  118 (397)
T PRK05939         49 TAALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA--  118 (397)
T ss_pred             HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence            3499999999873        223455556689999999999999999999999997653   345668988888764  


Q ss_pred             CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       165 ~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                           .|+|++++.+++++++|++.+|+||||.+   .++++|+++|+++|+++|+|++|+...    ...+. .+   +
T Consensus       119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~~~~~-~~---g  182 (397)
T PRK05939        119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----LFRPK-DV---G  182 (397)
T ss_pred             -----CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----ccCcc-cc---C
Confidence                 27899999999999999999999999999   789999999999999999999986421    11111 11   2


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCc-------chhH-------HHHHHHHhhh--cccccCCchHHHHHHHHHhhc
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSG-------ILQE-------LRIVDSIKGY--LNISSGPATFVQGAVPQIFKN  308 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~-------~~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~  308 (421)
                      ..+++.|+||.++..|.++|++++.+...       ....       ......+...  .......++.....+...|+ 
T Consensus       183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~-  261 (397)
T PRK05939        183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAE-  261 (397)
T ss_pred             CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcC-
Confidence            34889999999999999999988743210       0000       0001111111  11222344444443333333 


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                          -+..+.++..++...+.+.|+++|.+..+..|
T Consensus       262 ----tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP  293 (397)
T PRK05939        262 ----TLALRVDRSCSNALALAQFLEAHPKVARVYYP  293 (397)
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence                25555666677888999999988776534344

>PRK06541 hypothetical protein; Provisional

Probab=99.90  E-value=2.6e-20  Score=179.30  Aligned_cols=357  Identities=14%  Similarity=0.123  Sum_probs=221.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|.-.... ...+|.+.+++.+++++...  +.......+....+++.+.+..+  ...+.++++++|++
T Consensus        49 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse  123 (460)
T PRK06541         49 DRGKRYLDGLAGLFVVQV-GHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSE  123 (460)
T ss_pred             CCCCEEEECCccHHhccC-CCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHH
Confidence            358899999888544333 35689999999999986321  11111112334445555544222  22368999999999


Q ss_pred             HHHHHHHHhcC-------C-CCeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCCCC---ccCC-----
Q 014631          121 AIQVILTVLAR-------P-GANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPEKG---WEVD-----  171 (421)
Q Consensus       121 al~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~d-----  171 (421)
                      |+..+++....       + ..+|+....+|++....+... |.            .+..+|.+....   ++-+     
T Consensus       124 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (460)
T PRK06541        124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFG  203 (460)
T ss_pred             HHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHH
Confidence            99999876431       2 368999999999876544322 11            111222111000   1112     


Q ss_pred             ---HHHHHhhhc---cCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          172 ---LDGLEALAD---ENTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       172 ---~e~l~~~~~---~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                         ++.+++.+.   ++..+.++..| ++++|.+. |.+.+++|.++|++||+++|+||+|.++.+.|..+ ....++..
T Consensus       204 ~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~  282 (460)
T PRK06541        204 RWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYV  282 (460)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCC
Confidence               356666664   34566677788 88899875 48889999999999999999999998886666543 22223322


Q ss_pred             CCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhhc-----ccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          244 VPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGYL-----NISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      .+++   +++|.++ +|+ ++|+++++        +++++.+....     ..+.+.++++.+++.+.|+...+   ++.
T Consensus       283 PDiv---t~gK~l~-~G~~pigav~~~--------~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~---~~~  347 (460)
T PRK06541        283 PDII---TCAKGIT-SGYSPLGAMIAS--------DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER---EGL  347 (460)
T ss_pred             CCEE---Eeccccc-CCccceeEEEEc--------HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccH
Confidence            2333   5899975 676 99999996        35666554321     12456788888888888765222   234


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcccc-CCCCceeEEEEecCcccc--cCCCCh-----H-HHHHHHHhhcCeeEEeCCCCCC
Q 014631          318 VDILRDTADICYDRIKEIPCITCP-RKPEGSMFVMVKLNLSLL--EGISDD-----M-EFALQLAKEESVIVLPGMAVGM  388 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~-----~-~~~~~ll~~~gv~v~~g~~~~~  388 (421)
                      .++++++.+++.+.|+++....++ .....|.+..+++.....  ......     . ..+...+.++||++.+.. . .
T Consensus       348 ~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~-g  425 (460)
T PRK06541        348 LDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD-R-G  425 (460)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-C-C
Confidence            566667777777777665222111 012335566677642110  000000     1 123334567899998731 1 1


Q ss_pred             CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          389 KNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       389 ~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      .+.+|++++  .+++++++++++|.+++++..++
T Consensus       426 ~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~~  459 (460)
T PRK06541        426 DPVVQLAPPLISGQEEFDEIEQILRSVLTEAWAR  459 (460)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            367999998  89999999999999999887665

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.90  E-value=5.3e-20  Score=176.90  Aligned_cols=356  Identities=15%  Similarity=0.128  Sum_probs=212.1

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD-VYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~-i~~~~g~~  119 (421)
                      ..|.+++||..|...... ...+|.+.+++.+++.+......  ..-..+.+..+|+.+....+....... ++++++|+
T Consensus        36 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGs  112 (442)
T TIGR00709        36 VEGKEYLDFLAGAGTLAL-GHNHPNMKQKILDYLQSGLPLHT--LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGA  112 (442)
T ss_pred             CCCCEEEEccccHhhhcC-CCCCHHHHHHHHHHHHhccCccc--cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHH
Confidence            458899999888644332 35788999999999986321111  001134555566666543331111234 45568999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--cc----CCH----HH
Q 014631          120 QAIQVILTVLAR-PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WE----VDL----DG  174 (421)
Q Consensus       120 ~al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~----~d~----e~  174 (421)
                      +|+..+++.... .| .+|+....+|++....+.....             .+..++.+....  ++    .+.    +.
T Consensus       113 EA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (442)
T TIGR00709       113 DAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEY  192 (442)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence            999999886531 23 6799999999988655543211             112222211000  00    011    11


Q ss_pred             HHhhhc------cCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631          175 LEALAD------ENTVAMVIVNPGNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI  247 (421)
Q Consensus       175 l~~~~~------~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  247 (421)
                      +++.+.      .+..++++...++..|. .+|++.++++.++|++||+++|.||+++++.+.|..+ ....++...+++
T Consensus       193 ~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~PDiv  271 (442)
T TIGR00709       193 FENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF-AFEHAGIEPDFV  271 (442)
T ss_pred             HHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh-HHHHcCCCCcEE
Confidence            233332      23344444433554554 5788999999999999999999999999998777532 333344333344


Q ss_pred             EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD  326 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  326 (421)
                         +++|.++. |+++|++++++        + .+.+... ...+.+.++++++++.++|+...+..   ..++.+++.+
T Consensus       272 ---~~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~g~  335 (442)
T TIGR00709       272 ---VMSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDN---LAQNAQERGE  335 (442)
T ss_pred             ---EEcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHH
Confidence               37999765 89999999863        2 2332221 22456789999999999987533322   2334445555


Q ss_pred             HHHHHhhc----CCCccccCCCCceeEEEEecCcccc-cC----CC---ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631          327 ICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLL-EG----IS---DDMEFALQLAKEESVIVLPGMAVGMKNWLRI  394 (421)
Q Consensus       327 ~~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~-~~----~~---~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi  394 (421)
                      ++.+.|++    .|.+..+ . .-|.+..+++..... .+    ..   .....+...+.++||++.+...  ..+.+|+
T Consensus       336 ~l~~~L~~l~~~~~~v~~v-r-G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~  411 (442)
T TIGR00709       336 RITSFLDDMIKEHPCIGNV-R-GRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR--EGEVFRL  411 (442)
T ss_pred             HHHHHHHHHHHhCCCeeee-e-ccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC--CCCEEEE
Confidence            55555543    4433312 2 335667677743210 00    00   0112233345678999976432  2478999


Q ss_pred             Eec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          395 TFA--IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       395 ~~~--~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      .++  .++++++++++++.+++++..++
T Consensus       412 ~Ppl~it~~ei~~~~~~l~~~l~~~~~~  439 (442)
T TIGR00709       412 LCPITIDQEECEEGISRFKQAVEEALAE  439 (442)
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            887  79999999999999999876543

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.90  E-value=2.7e-21  Score=181.31  Aligned_cols=311  Identities=14%  Similarity=0.104  Sum_probs=206.6

Q ss_pred             CCcHHHHHHHHHHHhcC-CC--CCCCCC-------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC-HHHHHHHHHHHh
Q 014631           61 RTTPVAADAVVDAVRSA-EF--DCYSPS-------VGILPARRAIADYLNSELPCKLSPDDVYLTAG-CKQAIQVILTVL  129 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~-~~--~~y~~~-------~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g-~~~al~~~~~~l  129 (421)
                      +.|+.|.+++.+.+.+. +.  ..|...       .-+.+.|+.++++++    . .+++++++|+| +|++++.++..+
T Consensus         9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~----~-~~~~~vvf~~gs~T~a~~~~~~~l   83 (355)
T cd00611           9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLN----I-PDNYKVLFLQGGATGQFAAVPLNL   83 (355)
T ss_pred             CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC----C-CCCceEEEEcCCchHHHHHHHHhc
Confidence            57899999999987431 11  112111       224577777888773    1 25678999988 999999999999


Q ss_pred             cC---CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC-HHHHHhhhccCceEEEEeCCCCCcccccCHHHHH
Q 014631          130 AR---PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD-LDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQ  205 (421)
Q Consensus       130 ~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~  205 (421)
                      ..   +||.|++. +-...+...++..|.+++.++.+.+.++. + ++..+..+++++++|.+++..|.||+.++     
T Consensus        84 ~~~~~~~~~i~~g-~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~-----  156 (355)
T cd00611          84 LGDKGTADYVVTG-AWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAPDAAYVHYCSNETIHGVEFD-----  156 (355)
T ss_pred             CCCCCeEEEEECC-HHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCCCCCEEEEeCCcccccEEcc-----
Confidence            77   45555442 11122234678889998888864332221 3 33333445678999999999999999843     


Q ss_pred             HHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631          206 KIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK  285 (421)
Q Consensus       206 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~  285 (421)
                         ++++.||+++++|.+++.    |....++..++     +.+.|.+|.||.+|  +|++++++        ++.+++.
T Consensus       157 ---~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~--------~~~~~~~  214 (355)
T cd00611         157 ---EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK--------DLLGKAR  214 (355)
T ss_pred             ---eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH--------HHHhhcc
Confidence               344459999999999988    44444544433     45566899988777  78988863        2332222


Q ss_pred             h-------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCcc-ccCCCC--cee
Q 014631          286 G-------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCIT-CPRKPE--GSM  348 (421)
Q Consensus       286 ~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~--~~~  348 (421)
                      .             .....++++.....++.++++...+. +++.+.++.+++.+++++.|+++||+. ....+.  .+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~  294 (355)
T cd00611         215 KITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRM  294 (355)
T ss_pred             cCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCce
Confidence            1             11123578888888888888865555 689999999999999999999998863 121111  112


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      .+.+.++..     ....++.. .+.+.|+...+|..  ..+.+|+|+.  ++.+|++++++.|+++
T Consensus       295 vvsf~~~~~-----~l~~~~~~-~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         295 NVPFRLGKE-----ELEKEFLK-EAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             EEEEEcCCh-----hhhHHHHH-HHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            244444321     01233333 44668998666654  2478999998  7999999999999884

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PLN02509 cystathionine beta-lyase

Probab=99.89  E-value=2.1e-20  Score=178.33  Aligned_cols=228  Identities=18%  Similarity=0.172  Sum_probs=156.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCc
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRL  155 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~  155 (421)
                      ..|... |.+ .++++.+++.+..|    .+..++++++++++..++ .++++||+|+++.+.|.++..    .....|+
T Consensus       125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~  197 (464)
T PLN02509        125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV  197 (464)
T ss_pred             CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence            356543 433 45555555555433    456677778888987766 467899999999999998763    3456788


Q ss_pred             eeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631          156 EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV  235 (421)
Q Consensus       156 ~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  235 (421)
                      +++.++.       .|++++++.+++++++|++++|+||+|.+   .++++|+++|+++|+++|+|++|+.... +.   
T Consensus       198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-~~---  263 (464)
T PLN02509        198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVL-SR---  263 (464)
T ss_pred             EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccccc-CC---
Confidence            8877652       36899999998899999999999999998   8899999999999999999999875432 11   


Q ss_pred             cccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhH
Q 014631          236 RMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDF  313 (421)
Q Consensus       236 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~  313 (421)
                      ++ ..+.   .+++.|++|.++.+| .-.|++++.++       .+.+.+...... ....++.....+...|     +.
T Consensus       264 pl-~~ga---Divv~S~tK~l~G~gdv~gG~v~~~~~-------~l~~~~~~~~~~~g~~l~p~~A~l~lr~L-----~t  327 (464)
T PLN02509        264 PL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGI-----KT  327 (464)
T ss_pred             hh-hcCC---cEEEecCcccccCCCccceeEEEeccH-------HHHHHHHHHHHhcCCCcCHHHHHHHHhhh-----hh
Confidence            22 1222   388899999977644 33577776432       233333222221 1233444444433333     33


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          314 FSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      +..+.++.++++..+.+.|+++|.+.-+.+|
T Consensus       328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yP  358 (464)
T PLN02509        328 MALRIEKQQENARKIAMYLSSHPRVKKVYYA  358 (464)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            6777888889999999999998877534444

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.89  E-value=3e-20  Score=176.42  Aligned_cols=312  Identities=17%  Similarity=0.152  Sum_probs=203.9

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcC
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPK  140 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~  140 (421)
                      ..+.-++++.+.+..+.   |.......++|++++++++.        ++.++++|+++|+..++.++ +++||+|+++.
T Consensus         8 ~~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~   76 (380)
T TIGR03588         8 IDQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGVGPGDRVWTTP   76 (380)
T ss_pred             CCHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCC
Confidence            34556778888877643   22234468999999999842        34566778999999999998 78999999999


Q ss_pred             CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631          141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI  216 (421)
Q Consensus       141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~  216 (421)
                      ++|.++...+...|++++.++++++ .+.+|++++++.++    +++++|+++   |++|..   .++++|.++|++||+
T Consensus        77 ~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~---~~~~~i~~l~~~~~~  149 (380)
T TIGR03588        77 ITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKS---VDMQAIAALAKKHGL  149 (380)
T ss_pred             cchHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEe---CCCCcc---CCHHHHHHHHHHcCC
Confidence            9999999999999999999998653 46789999999987    678877754   468877   458899999999999


Q ss_pred             EEEEcccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc--
Q 014631          217 MVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS--  291 (421)
Q Consensus       217 ~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--  291 (421)
                      ++|+|++|+.+. +.+.   ++.... . ..+.+.|++  |.++.+  ..|+++..+       +++.++++......  
T Consensus       150 ~lI~D~a~a~g~~~~~~---~~g~~~-~-~d~~~~S~~~~K~~~~~--~GG~v~~~~-------~~~~~~~~~~~~~g~~  215 (380)
T TIGR03588       150 KIIEDASHALGAEYGGK---PVGNCR-Y-ADATVFSFHPVKIITTA--EGGAVTTND-------EELAERMRLLRSHGIT  215 (380)
T ss_pred             EEEEECCCcccCccCCE---eCCCcc-c-cceEEEecCCCCccccc--CceEEEECC-------HHHHHHHHHHHHCCCC
Confidence            999999998743 3332   121200 1 126666776  776443  457777754       23445443321100  


Q ss_pred             ------------------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-
Q 014631          292 ------------------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-  346 (421)
Q Consensus       292 ------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-  346 (421)
                                              ...+.+....+..-|     ..+++..++-+++.+++.+.|.++|++.....+.+ 
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~  290 (380)
T TIGR03588       216 KDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGS  290 (380)
T ss_pred             CCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCC
Confidence                                    000111111111112     33677777888888999999998877662222211 


Q ss_pred             --e-eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-----------CC----------CCeEEEEec--CCH
Q 014631          347 --S-MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-----------GM----------KNWLRITFA--IEP  400 (421)
Q Consensus       347 --~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~----------~~~iRi~~~--~~~  400 (421)
                        + ....+.++..   ...+..++... |+++||.+......           ..          ...+++.++  .++
T Consensus       291 ~~~~~~~~i~~~~~---~~~~r~~l~~~-L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~  366 (380)
T TIGR03588       291 KSAWHLYPILLDQE---FGCTRKEVFEA-LRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTL  366 (380)
T ss_pred             EeEEEEEEEEECCc---CCCCHHHHHHH-HHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCH
Confidence              1 2223334321   01134455554 57889988643311           00          145777766  689


Q ss_pred             HHHHHHHHHHHHHH
Q 014631          401 SALEEGLGRIKAFC  414 (421)
Q Consensus       401 e~l~~~~~~l~~~~  414 (421)
                      ++++.+++.|++++
T Consensus       367 ~dv~~i~~~l~~~~  380 (380)
T TIGR03588       367 EQQQRVVETLRKVL  380 (380)
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999998764

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.89  E-value=2.5e-20  Score=178.87  Aligned_cols=345  Identities=14%  Similarity=0.141  Sum_probs=216.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|.+++|+..|.-.... ...+|.+.+++.+++.+... ..|..    .+.+..+++.+....+  ...+.++++++|+
T Consensus        79 ~dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~ql~~l~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  151 (459)
T PRK11522         79 TQGQEFIDCLGGFGIFNV-GHRNPVVVSAVQNQLAKQPLHSQELL----DPLRAMLAKTLAALTP--GKLKYSFFCNSGT  151 (459)
T ss_pred             CCCCEEEECCcCHHhhhc-CCCCHHHHHHHHHHHhhCcccccccC----CHHHHHHHHHHHHhCC--CCCCEEEEeCCch
Confidence            347888999777433222 35789999999999986322 11212    3444455555544332  2236899999999


Q ss_pred             HHHHHHHHHhc----CCC-CeEEEcCCCCcchHHHHhhcCcee-Ee---eeccCCC---CccCCHHHHHhhhcc-----C
Q 014631          120 QAIQVILTVLA----RPG-ANILLPKPGFPLYEANARHTRLEI-RH---FDLLPEK---GWEVDLDGLEALADE-----N  182 (421)
Q Consensus       120 ~al~~~~~~l~----~~g-d~Vl~~~p~y~~~~~~~~~~g~~~-~~---~~~~~~~---~~~~d~e~l~~~~~~-----~  182 (421)
                      +|+..+++...    ++| .+|+....+|++....+....... ..   .|..+.-   .+ .|.+++++.+..     +
T Consensus       152 EAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~~  230 (459)
T PRK11522        152 ESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRTALSECKKTGD  230 (459)
T ss_pred             HHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHHHHHHhhccCC
Confidence            99999988653    123 468889999999865544332111 10   1111100   01 156777776642     2


Q ss_pred             ceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC
Q 014631          183 TVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG  260 (421)
Q Consensus       183 ~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  260 (421)
                      ..+.+++.| +...|.+ .|++.++++.++|++||+++|+||+++++.+.|..+ ....++...+++   +++|.++ .|
T Consensus       231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~lg-gG  305 (459)
T PRK11522        231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKALG-GG  305 (459)
T ss_pred             cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhhh-CC
Confidence            334556666 5566775 466789999999999999999999999887666532 222333222233   7899964 56


Q ss_pred             -ceEEEEEeeCCCcchhHHHHHHHHhhh--c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc--
Q 014631          261 -WRLGWLVTSDPSGILQELRIVDSIKGY--L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE--  334 (421)
Q Consensus       261 -~r~G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~--  334 (421)
                       +++|.++++        +++.+.+...  . ..+.+.++++.+++.+.|+...++   +..++.+++.+++.+.|++  
T Consensus       306 ~~Pigav~~~--------~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~  374 (459)
T PRK11522        306 VMPIGATIAT--------EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLA  374 (459)
T ss_pred             CccceeEEEc--------HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHH
Confidence             689999985        3565655321  1 234466889998888888763322   2344555555566655554  


Q ss_pred             --CCC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHH
Q 014631          335 --IPC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGR  409 (421)
Q Consensus       335 --~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~  409 (421)
                        +|. +..+ . ..|.+..+++....     ....+... +.++||.+.+...  ..+.+|++++  .+++++++++++
T Consensus       375 ~~~~~~i~~V-r-G~Gl~~giel~~~~-----~~~~i~~~-l~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~  444 (459)
T PRK11522        375 REYPDLVQEA-R-GKGMLMAIEFVDNE-----IGYNFASE-MFRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKA  444 (459)
T ss_pred             HhCCCceeeE-E-eceeEEEEEecCch-----HHHHHHHH-HHHCCeEEEecCC--CCCEEEEECCccCCHHHHHHHHHH
Confidence              332 2212 1 23667777775321     13345554 4668999976421  2478999987  799999999999


Q ss_pred             HHHHHHHhhh
Q 014631          410 IKAFCQRHAK  419 (421)
Q Consensus       410 l~~~~~~~~~  419 (421)
                      |.++++++.+
T Consensus       445 l~~~l~~~~~  454 (459)
T PRK11522        445 ARKALAAMRV  454 (459)
T ss_pred             HHHHHHHHHH
Confidence            9999987654

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.89  E-value=3.1e-20  Score=176.18  Aligned_cols=339  Identities=15%  Similarity=0.063  Sum_probs=222.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhc--------
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLA--------  130 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~--------  130 (421)
                      +..+.+.+++...+... ..++.......++++.+.+|+.+.+|.+...+++.+  |+|+|+|++.++.+..        
T Consensus        52 ~~~p~~~~~~~~~l~~~-~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~  130 (431)
T TIGR01788        52 WMEPEARKLMDETINKN-MIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME  130 (431)
T ss_pred             CCCHHHHHHHHHHHhcC-CCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence            44567888888888642 122222333458888888888887774311145544  8999999998875542        


Q ss_pred             CCC-----CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHH
Q 014631          131 RPG-----ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQ  205 (421)
Q Consensus       131 ~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~  205 (421)
                      +.|     ..|++++..|+++...++..|++++.+|+++ +++.+|+++|++.+++++.+|+++.++|.||.+   ++++
T Consensus       131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~  206 (431)
T TIGR01788       131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVK  206 (431)
T ss_pred             hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHH
Confidence            112     3799999999999999999999999999865 345689999999999899999999999999999   6689


Q ss_pred             HHHHHHHhc------CcEEEEccccccccc---CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631          206 KIAEKARKL------GIMVISDEVYDHLTF---GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ  276 (421)
Q Consensus       206 ~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  276 (421)
                      +|+++|+++      |+++++|.+|+++..   .+.....+. ..  .-.-+..|.||++ .....+|+++++++.    
T Consensus       207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~~--~~DSis~s~HK~~-~~P~g~G~l~~r~~~----  278 (431)
T TIGR01788       207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-LP--RVKSINVSGHKYG-LVYPGVGWVIWRDEE----  278 (431)
T ss_pred             HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-CC--CceEEEECchhcc-CCCCCcEEEEEeChH----
Confidence            999999999      999999999996431   122222222 11  1113455899984 334448999987532    


Q ss_pred             HHHHHHHHhhh---c-----ccccCCchH--HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-C
Q 014631          277 ELRIVDSIKGY---L-----NISSGPATF--VQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-E  345 (421)
Q Consensus       277 ~~~~~~~~~~~---~-----~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-~  345 (421)
                        .+.+.+...   .     ..+...+..  ........|......++.++.++..++.+++.+.|++.|+++++ .| .
T Consensus       279 --~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~-~~~~  355 (431)
T TIGR01788       279 --ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII-SDGS  355 (431)
T ss_pred             --HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe-eCCC
Confidence              121222110   0     000011111  11223333433445788999999999999999999999888854 43 2


Q ss_pred             ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC---CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA---VGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~---~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ....+.++++.... ...+..++.+.| .+.|+.+.....   ......+|+++.  .+++.++.+++.|++++.++
T Consensus       356 ~~~iV~Fr~~~~~~-~~~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (431)
T TIGR01788       356 GIPLVAFKLKDDAD-PGYTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL  430 (431)
T ss_pred             CceEEEEEeCCCCC-CCcCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence            23344455542110 011345666654 677987533222   112346899985  68899999999999998764

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.89  E-value=3.2e-20  Score=179.46  Aligned_cols=338  Identities=10%  Similarity=0.032  Sum_probs=214.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHH----HHHHHHHhhhCCCCCCCCcE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPAR----RAIADYLNSELPCKLSPDDV  112 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~----~~ia~~l~~~~~~~~~~~~i  112 (421)
                      ..+.++|-...      -..++.+++++...+.+.....++      .......++    +.+++++    |  ++++++
T Consensus        33 ~~~~l~l~~se------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~--a~~~~~  100 (452)
T PTZ00094         33 QIEGLELIASE------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----G--LDPEEW  100 (452)
T ss_pred             HHcCeeEeccc------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCcccc
Confidence            36678887554      256788999998887652211222      112233343    4555555    3  566777


Q ss_pred             EEc---CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----------cCceeEeeeccCCCCccCCHHHHHhhh
Q 014631          113 YLT---AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----------TRLEIRHFDLLPEKGWEVDLDGLEALA  179 (421)
Q Consensus       113 ~~~---~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----------~g~~~~~~~~~~~~~~~~d~e~l~~~~  179 (421)
                      .++   +||++++..++.++.++||+|++....|.+....+..          .+.++..++++.  ++.+|++++++.+
T Consensus       101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l  178 (452)
T PTZ00094        101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA  178 (452)
T ss_pred             eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence            666   7899999999999999999999988888765443321          112334444443  3569999999988


Q ss_pred             cc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccC
Q 014631          180 DE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWI  257 (421)
Q Consensus       180 ~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~  257 (421)
                      ++ +++.+++.  ++.+|...   ++++|.++|+++|+++++|++|+.....+... .++.     .-.++++|++|+++
T Consensus       179 ~~~~~~lvi~~--~s~~g~~~---di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~  248 (452)
T PTZ00094        179 KAFRPKLIIAG--ASAYPRDI---DYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR  248 (452)
T ss_pred             HHhCCCEEEEe--CCCCCCcc---CHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC
Confidence            54 55655543  33488885   47788888999999999999998855433211 1211     12377899999864


Q ss_pred             CCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +|.  .|++++++..  .  ..+...+.....  ..++++....+++.++++.......++.++++.++.+++.+.|.+.
T Consensus       249 GP~--Gg~l~~~~~~--~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~  322 (452)
T PTZ00094        249 GPR--SGLIFYRKKV--K--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR  322 (452)
T ss_pred             CCC--ceEEEEeccc--c--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC
Confidence            333  4888875321  1  112222222111  1235666677777777765434566778889999999999999876


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE-eCCCCCC----CCeEEEEec--CC----HHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL-PGMAVGM----KNWLRITFA--IE----PSALE  404 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~~----~~~iRi~~~--~~----~e~l~  404 (421)
                       |+.+..........++.+....    .+... +..+|+++||.+. ++..+..    ++++|++++  ++    ++|++
T Consensus       323 -g~~v~~~~~~~~~~~v~~~~~~----~~~~~-~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~  396 (452)
T PTZ00094        323 -GYDLVTGGTDNHLVLVDLRPFG----ITGSK-MEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK  396 (452)
T ss_pred             -CcEEecCCCCCceEeecCCcCC----CCHHH-HHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH
Confidence             7763321111233444454321    13344 4455688899994 4443322    478999997  44    89999


Q ss_pred             HHHHHHHHHHHH
Q 014631          405 EGLGRIKAFCQR  416 (421)
Q Consensus       405 ~~~~~l~~~~~~  416 (421)
                      ++++.|.++++.
T Consensus       397 ~l~~~l~~~~~~  408 (452)
T PTZ00094        397 FVADFLDRAVKL  408 (452)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999874

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.89  E-value=2.8e-20  Score=177.35  Aligned_cols=344  Identities=14%  Similarity=0.094  Sum_probs=210.1

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|..++||..|.-.... ...+|.+.+++.+++.+... ..|..    .+.+..+|+.+.+..+  ...+.++++++|+
T Consensus        72 ~dG~~ylD~~~g~~~~~l-Gh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~~SGs  144 (442)
T TIGR03372        72 TQGNEFIDCLGGFGIFNV-GHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTP--GKLKYSFFCNSGT  144 (442)
T ss_pred             CCCCEEEECCccHHhhhc-CCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence            348899999877322222 35789999999999986322 12222    2444445555544332  2236799999999


Q ss_pred             HHHHHHHHHhcC----CC-CeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCC--ccCCHHHHHhhhc-----cCc
Q 014631          120 QAIQVILTVLAR----PG-ANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKG--WEVDLDGLEALAD-----ENT  183 (421)
Q Consensus       120 ~al~~~~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~e~l~~~~~-----~~~  183 (421)
                      +|+..+++....    .| .+|+....+|++....+........    +.|..+.-.  .-.|.+.+++.+.     .+.
T Consensus       145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~  224 (442)
T TIGR03372       145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD  224 (442)
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence            999999886532    24 6799999999988655543321110    111111000  0025666666553     133


Q ss_pred             eEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-
Q 014631          184 VAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-  260 (421)
Q Consensus       184 ~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-  260 (421)
                      .+.++..| +...|... |++.++++.++|++||+++|+||+++++.+.|.. .....++...+++   +++|.++ .| 
T Consensus       225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~lg-~G~  299 (442)
T TIGR03372       225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKALG-GGV  299 (442)
T ss_pred             EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhhc-CCc
Confidence            44556666 55667654 6788999999999999999999999988777753 2333333222233   5899964 67 


Q ss_pred             ceEEEEEeeCCCcchhHHHHHHHHhhh--c-ccccCCchHHHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHHHhhcCC
Q 014631          261 WRLGWLVTSDPSGILQELRIVDSIKGY--L-NISSGPATFVQGAVPQIFKNTKEDF-FSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      +++|.++++        +++.+.+...  . ..+.+.++++.+++.++|+...++. .++.++.-...++.+.+...+.|
T Consensus       300 ~Pigavv~~--------~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~  371 (442)
T TIGR03372       300 MPIGATIAT--------EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYP  371 (442)
T ss_pred             ccceEEEec--------HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            689999885        3566666321  1 2345678899999888887533222 23223223333333333333344


Q ss_pred             -CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          337 -CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       337 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                       .+..+  ...|.++.+++....     ....+...+ .++||++.+...  ..+.+|+.++  .+++++++++++|.++
T Consensus       372 ~~i~~v--RG~Gl~~giel~~~~-----~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~  441 (442)
T TIGR03372       372 DLIIEA--RGKGLLMAIEFRDNE-----IGYAFAKEL-FQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDA  441 (442)
T ss_pred             CceEEE--ecceEEEEEEeCChH-----HHHHHHHHH-HHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence             23212  234677778875421     123455554 668999975321  1468999987  8999999999999886


Q ss_pred             H
Q 014631          414 C  414 (421)
Q Consensus       414 ~  414 (421)
                      +
T Consensus       442 ~  442 (442)
T TIGR03372       442 L  442 (442)
T ss_pred             C
Confidence            3

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.89  E-value=1.3e-19  Score=174.15  Aligned_cols=352  Identities=14%  Similarity=0.138  Sum_probs=211.6

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~  119 (421)
                      ..|+.++||..|.-....+ ..+|.+.+++.+++++...  +.......+....+++.+....+  .. .+.++|+++|+
T Consensus        39 ~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p--~~~~~~v~f~~SGs  113 (445)
T PRK08593         39 VDGKTYIDLLASASSQNVG-HAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAP--GDFEKRVTFGLSGS  113 (445)
T ss_pred             CCCCEEEECCccHHhhcCC-CCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchH
Confidence            3588999997775433333 4789999999999986422  11111112344444555544332  12 25899999999


Q ss_pred             HHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCC--cc-CC-------HH
Q 014631          120 QAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKG--WE-VD-------LD  173 (421)
Q Consensus       120 ~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~d-------~e  173 (421)
                      +|+..+++... -.| .+|+..+.+|++....+... +.             .+..+|.+....  +. .+       ++
T Consensus       114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  193 (445)
T PRK08593        114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA  193 (445)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence            99999998643 123 57888899999875444321 10             122233211100  00 01       23


Q ss_pred             HHHhhhc----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631          174 GLEALAD----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI  247 (421)
Q Consensus       174 ~l~~~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  247 (421)
                      ++++.+.    .+..+.++..| ++..|.. .|++.+++|.++|++||+++|+||+++++.+.|..+ ....++....  
T Consensus       194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD--  270 (445)
T PRK08593        194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD--  270 (445)
T ss_pred             HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC--
Confidence            4444332    13334456666 6667776 688899999999999999999999999887666532 2222332222  


Q ss_pred             EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD  326 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  326 (421)
                       +.+++|.++ .|+++|+++++        +++++.+.... ..+.+.+++.++++.++|+...+.   +..++.+++.+
T Consensus       271 -i~t~gK~l~-~G~p~gav~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~  337 (445)
T PRK08593        271 -LMSFGKSLA-GGMPMSAIVGR--------KEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE---SLLQRSAEKGE  337 (445)
T ss_pred             -Eeeeccccc-CCcccEEEEEc--------HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHH
Confidence             337899965 67999999985        35777664322 235578888888888888753322   22333344444


Q ss_pred             HHHHHhh----cCCCccccCCCCceeEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--
Q 014631          327 ICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--  397 (421)
Q Consensus       327 ~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--  397 (421)
                      ++.+.|+    +.|.+..+ . .-|.+..+.+.........+   ...+... +.++||.+.+..    .+.+|++++  
T Consensus       338 ~l~~~L~~l~~~~~~v~~v-r-G~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~~----~~~lr~~p~l~  410 (445)
T PRK08593        338 YARKRFDQWVSKYNFVGDV-R-GYGLSIGIDIVSDKKLKTRDNEAALKICNY-CFEHGVVIIAVA----GNVLRFQPPLV  410 (445)
T ss_pred             HHHHHHHHHHhcCCcEEEE-e-ccceEEEEEEecCCCcCCCcHHHHHHHHHH-HHHCCeEEeccC----CCEEEEECCCc
Confidence            4444443    34433312 2 23455555553211000001   2344544 466899986632    368999987  


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          398 IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      .++++++++++++.++++++.+.
T Consensus       411 ~t~~~id~~~~~l~~~l~~~~~~  433 (445)
T PRK08593        411 ITYEQLDTALNTIEQAFTALEAG  433 (445)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcc
Confidence            79999999999999999887543

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.89  E-value=2.8e-20  Score=173.09  Aligned_cols=316  Identities=15%  Similarity=0.097  Sum_probs=214.3

Q ss_pred             CcHHHHHHHHHHHhcCCC---CCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEcCC-HHHHHHHHHHHhcCCCC
Q 014631           62 TTPVAADAVVDAVRSAEF---DCYSPSVGIL---PARRAIADYLNSELPCKLSPDDVYLTAG-CKQAIQVILTVLARPGA  134 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~---~~y~~~~g~~---~l~~~ia~~l~~~~~~~~~~~~i~~~~g-~~~al~~~~~~l~~~gd  134 (421)
                      .|..+++++.+.+.+...   ..+....--+   ++-+.+.+.+.+.++. .+..++++++| ||++++.++..+..+||
T Consensus         3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~-~~~~~v~~~~gsgT~a~ea~~~nl~~~~~   81 (349)
T TIGR01364         3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNI-PDNYEVLFLQGGATGQFAAVPLNLLAEGK   81 (349)
T ss_pred             CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCC-CCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence            577889999998874221   1222111112   3433444444444442 13456777766 99999999999998999


Q ss_pred             eEEEcCCCCcc--hHHHHhhcCceeEeeeccCCCCc--cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 014631          135 NILLPKPGFPL--YEANARHTRLEIRHFDLLPEKGW--EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK  210 (421)
Q Consensus       135 ~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~--~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~  210 (421)
                      ++++...+..+  +...++..|. +..+..++..+|  .+++++++  ++++++.|.+++..+.||+..+        ++
T Consensus        82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l  150 (349)
T TIGR01364        82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL  150 (349)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence            99888777765  3677888898 776665422212  34556554  3457889999999999999864        56


Q ss_pred             HHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh----
Q 014631          211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG----  286 (421)
Q Consensus       211 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~----  286 (421)
                      ++.+++++++|.+++.    |.....+..++     +++.|.+|.||.+|  +|++++++        ++.+++..    
T Consensus       151 ~~~~~~l~iVDavss~----g~~~id~~~~d-----~~~~ssqK~lgP~G--lg~l~~s~--------~~~~~~~~~~~~  211 (349)
T TIGR01364       151 PDVKNAPLVADMSSNI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTVVIVRK--------DLLGRASRITPS  211 (349)
T ss_pred             cccCCCeEEEEccccc----cCccCCHHHcc-----EEEEecccccCCCc--eEEEEECH--------HHHhhcccCCCC
Confidence            6678999999999987    44444444432     77889999998777  78888864        22222211    


Q ss_pred             ---------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCC-CC-ce-eEEEEe
Q 014631          287 ---------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRK-PE-GS-MFVMVK  353 (421)
Q Consensus       287 ---------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-~~-~~-~~~~~~  353 (421)
                               .....++|+.....++.++|+...+. +++.+.++.+++.+++++.|++++|+..... |. .+ ....+.
T Consensus       212 ~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~  291 (349)
T TIGR01364       212 MLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFT  291 (349)
T ss_pred             cchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEe
Confidence                     11223588888889998888865556 6999999999999999999999987752311 21 12 233344


Q ss_pred             cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                      ++...     ...++.. .+.++|+++.+|..  ..+.+|+|+.  ++.||++.+++.|++++++
T Consensus       292 ~~~~~-----~~~~~~~-~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~  348 (349)
T TIGR01364       292 LGNEE-----LEKRFLK-EAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK  348 (349)
T ss_pred             cCChh-----HhHHHHH-HHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence            44210     1234434 45678998877765  3468999997  7899999999999997765

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.89  E-value=1.7e-19  Score=172.47  Aligned_cols=331  Identities=15%  Similarity=0.136  Sum_probs=204.6

Q ss_pred             CCeeeccCCCCCCCCC-CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           44 RPIIPLGHGDPSAFPC-FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..+..|+.|.|..... ...++.-.+++.+.+... ...+++.  ..+++++++++++        .+.+++++||++++
T Consensus        23 ~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~-~~~~G~~--~~~fe~~lA~~~g--------~~~~v~~~sGt~al   91 (438)
T PRK15407         23 HAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDF-WLTTGRF--NDAFEKKLAEFLG--------VRYALLVNSGSSAN   91 (438)
T ss_pred             cccccccCCCCCCCcCccCCCHHHHHHHHHHHHhC-cccCChh--HHHHHHHHHHHhC--------CCeEEEECCHHHHH
Confidence            4445578888764322 123333345555555442 2233333  5799999999984        24689999999999


Q ss_pred             HHHHHHh---------cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC
Q 014631          123 QVILTVL---------ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN  193 (421)
Q Consensus       123 ~~~~~~l---------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n  193 (421)
                      ..++.++         ++|||+|+++.++|.++...+...|++++.+++++ ..+.+|++.+++.+.+++++|+++++  
T Consensus        92 ~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~--  168 (438)
T PRK15407         92 LLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT--  168 (438)
T ss_pred             HHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC--
Confidence            9988876         37899999999999999999999999999988764 35679999999999889999988775  


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                       +|..   .++++|.++|+++|+++|+|++|+.+. +.|.   .+..++    .+.+.||+..-.+..-..|+++++++ 
T Consensus       169 -~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~---~~G~~g----d~~~fSf~~~k~~~~geGG~l~t~d~-  236 (438)
T PRK15407        169 -LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR---MTGTFG----DIATLSFYPAHHITMGEGGAVFTNDP-  236 (438)
T ss_pred             -CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCe---eeeccC----ceEEEeCCCCCCccccCceEEEECCH-
Confidence             4543   578999999999999999999998754 2232   122222    14566776332222222488888753 


Q ss_pred             cchhHHHHHHHHhhhcccc----------------------------------------cCCchHHHHHHHHHhhccchh
Q 014631          273 GILQELRIVDSIKGYLNIS----------------------------------------SGPATFVQGAVPQIFKNTKED  312 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~l~~~~~~  312 (421)
                            ++.+.+.......                                        ...+.+..+.+..-     -.
T Consensus       237 ------~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~q-----L~  305 (438)
T PRK15407        237 ------LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQ-----LE  305 (438)
T ss_pred             ------HHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHH-----HH
Confidence                  3443333221100                                        00111111111111     24


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCcee----EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC--
Q 014631          313 FFSKIVDILRDTADICYDRIKEIPC-ITCPRKPEGSM----FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA--  385 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--  385 (421)
                      .++++.++-+++.+++.+.|.++++ +.....+.+..    .+.+.++...   ..+-.++... |+++||...+...  
T Consensus       306 ~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~Rd~l~~~-L~~~GI~~~~~~~~~  381 (438)
T PRK15407        306 KLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA---GFTRVELVKY-LEENKIGTRLLFAGN  381 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC---CCCHHHHHHH-HHHCCCCccccCCCc
Confidence            4666777777888888888887764 33222222221    2223333210   0123445554 5778997654321  


Q ss_pred             CCC----------------------CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          386 VGM----------------------KNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       386 ~~~----------------------~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      .+.                      ...+-+-+.  .++++++.+++.|+++++
T Consensus       382 ~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~  435 (438)
T PRK15407        382 LTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG  435 (438)
T ss_pred             cccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence            000                      112222232  478999999999999875

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=7.1e-20  Score=171.39  Aligned_cols=216  Identities=16%  Similarity=0.151  Sum_probs=151.2

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeeccCC
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLLPE  165 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~  165 (421)
                      .|++.++++-    +   .++. +++++|++|++.++.+++++||+|++++|.|.++..    .++..|.++..++..  
T Consensus        68 ~Le~~la~le----~---~~~~-v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~--  137 (395)
T PRK05967         68 ALCKAIDALE----G---SAGT-ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE--  137 (395)
T ss_pred             HHHHHHHHHh----C---CCCE-EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC--
Confidence            4555555443    1   2344 555558999999999999999999999999998864    456788888777421  


Q ss_pred             CCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC
Q 014631          166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP  245 (421)
Q Consensus       166 ~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  245 (421)
                           +.+.+++++++++++|++.+|+||++..   .++++|+++|+++|+++|+|++|....+    ..++ .++.+  
T Consensus       138 -----~~e~l~~al~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----~~pl-~~GaD--  202 (395)
T PRK05967        138 -----IGAGIAKLMRPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----FRPL-DFGVD--  202 (395)
T ss_pred             -----CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee----cChh-HcCCC--
Confidence                 3477999999999999999999998777   8899999999999999999999976321    1122 23333  


Q ss_pred             EEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631          246 VITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD  323 (421)
Q Consensus       246 ~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  323 (421)
                       +++.|.+|.++. ++.-.|+++.+        +++.+++..... ...+.++.....+..-|+     -+.-+.++..+
T Consensus       203 -ivv~S~tKy~~Gh~d~~~G~v~~~--------~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~-----Tl~lR~~~~~~  268 (395)
T PRK05967        203 -ISIHAATKYPSGHSDILLGTVSAN--------EKCWPQLLEAHGTLGLCAGPDDTYQILRGLR-----TMGIRLEHHRK  268 (395)
T ss_pred             -EEEEecccccCCCCCeeEEEEEcC--------HHHHHHHHHHHHHcCCCCCHHHHHHHHcCcc-----cHHHHHHHHHH
Confidence             889999999654 34556766553        223344432222 223455555444333333     35666777788


Q ss_pred             HHHHHHHHhhcCCCccccCCC
Q 014631          324 TADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       324 ~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      +...+.+.|+++|.+.-+.+|
T Consensus       269 na~~lA~~L~~hp~v~~V~yP  289 (395)
T PRK05967        269 SALEIARWLEGRPDVARVLHP  289 (395)
T ss_pred             HHHHHHHHHHhCCCCcEEECC
Confidence            888899999988876534444

>PRK07678 aminotransferase; Validated

Probab=99.89  E-value=1e-19  Score=175.05  Aligned_cols=355  Identities=14%  Similarity=0.105  Sum_probs=212.8

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|.-.... ...+|.+.+++.+++++...  +.... ..+....+++.+.+..+   ..+.++++++|++
T Consensus        44 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~~~-~~~~~~~lae~l~~~~~---~~~~v~f~~sGse  116 (451)
T PRK07678         44 IQGNRYLDGMSGLWCVNV-GYGRKELAEAAYEQLKTLSY--FPLTQ-SHEPAIKLAEKLNEWLG---GEYVIFFSNSGSE  116 (451)
T ss_pred             CCCCEEEEccccHHhhcC-CCCCHHHHHHHHHHHHhcCc--ccccc-CCHHHHHHHHHHHHhCC---CCCEEEEeCCcHH
Confidence            458999999877544333 35789999999999986421  11111 12333444554444332   1358999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--cc-----CC-
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WE-----VD-  171 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~-----~d-  171 (421)
                      |+..+++....       +| .+|+....+|+++...+.....             .+..++.+....  ++     -+ 
T Consensus       117 A~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (451)
T PRK07678        117 ANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDL  196 (451)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHH
Confidence            99999876531       24 5789999999987654443211             111222111000  00     01 


Q ss_pred             --HHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          172 --LDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       172 --~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                        ++.+++.+.   ++..+.+|..| +...|.. .|++.++++.++|++||+++|+||+++++.+.|..+ ....++...
T Consensus       197 ~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~gv~P  275 (451)
T PRK07678        197 ECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMNYGVKP  275 (451)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHhcCCCC
Confidence              223455553   23345566777 5556765 577889999999999999999999999987777532 223333333


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchh-HHHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKED-FFSK  316 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~  316 (421)
                      +++   +++|.++...+++|.++++        +++++.+...       ...+.+.++++++++.++|+...++ ..++
T Consensus       276 Div---t~gK~lggG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~  344 (451)
T PRK07678        276 DII---TMAKGITSAYLPLSATAVK--------KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIER  344 (451)
T ss_pred             CEE---EeecccccCCcceeEEEEc--------HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence            334   6789965433799999995        4677766531       1235678899999998888753332 2233


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC----CChHHHHHHHHhhcCeeEEeCCC--CCCCC
Q 014631          317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI----SDDMEFALQLAKEESVIVLPGMA--VGMKN  390 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gv~v~~g~~--~~~~~  390 (421)
                      ..+.-...++.+.+.+.+++.+..+ . ..|.+..+++........    .....+... +.++||++.+...  ....+
T Consensus       345 ~~~~g~~l~~~l~~~~~~~~~v~~v-r-g~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~-l~~~Gv~~~~~g~~v~~~~~  421 (451)
T PRK07678        345 SAQLGELLLEQLKEELGEHPLVGDI-R-GKGLLVGIELVNDKETKEPADNDKVASVVAA-CKEKGLIIGKNGDTVAGYNN  421 (451)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEE-E-eeceEEEEEEecCCcccCcCchHHHHHHHHH-HHHCCcEEeecCccccCCCC
Confidence            3323333334444444444433212 2 235566666632110000    012334444 5678999976321  12246


Q ss_pred             eEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          391 WLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       391 ~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      .+|++++  .++++|++++++|.++++++
T Consensus       422 ~lrl~Ppl~it~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        422 VLTLSPPLVISSEEIAFIVGTLKTALERI  450 (451)
T ss_pred             EEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence            7999987  69999999999999999765

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=2.9e-20  Score=175.02  Aligned_cols=219  Identities=15%  Similarity=0.137  Sum_probs=152.8

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~  162 (421)
                      ...+|++.++++.+      . +..+ ++++|+.++..++ .++++||+|++++|.|.+...    .+...|++++.++.
T Consensus        51 ~~~~Le~~lA~l~g------~-~~~~-~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~  121 (377)
T PRK07671         51 TRAALEELIAVLEG------G-HAGF-AFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT  121 (377)
T ss_pred             HHHHHHHHHHHHhC------C-CceE-EeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence            35799999999873      2 2334 4555677887766 467899999999999985433    33457888887753


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                             .|++++++++++++++|++++|+||||.+   .++++|.++|+++|+++|+|++|....+. .   ++ .+..
T Consensus       122 -------~d~~~l~~ai~~~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~---p~-~~g~  186 (377)
T PRK07671        122 -------SNLEEVEEAIRPNTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ-S---PI-SLGA  186 (377)
T ss_pred             -------CCHHHHHHhcCCCCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC-C---hh-hhCC
Confidence                   38899999998899999999999999998   56888999999999999999999753321 1   22 2222


Q ss_pred             CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDI  320 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  320 (421)
                         .+++.|+||.++.++ .-.|++++++       +++.+.+...+.. ....++.....+...+     ..+..+.++
T Consensus       187 ---Divv~S~sK~l~G~~~~~~G~~v~~~-------~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l-----~tl~~R~~~  251 (377)
T PRK07671        187 ---DIVLHSATKYLGGHSDVVAGLVVVNS-------PELAEDLHFVQNSTGGILGPQDSWLLLRGL-----KTLGIRMEE  251 (377)
T ss_pred             ---eEEEecCcccccCCccceeEEEEeCc-------HHHHHHHHHHHHhhcCCCCHHHHHHHHcCc-----ChHHHHHHH
Confidence               388899999987654 3456666643       3456666554433 2234444444333222     235557777


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCC
Q 014631          321 LRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .+++...+.+.|+++|++..++.|
T Consensus       252 ~~~na~~la~~L~~~~~v~~v~~p  275 (377)
T PRK07671        252 HETNSRAIAEFLNNHPAVNKVYYP  275 (377)
T ss_pred             HHHHHHHHHHHHHcCCCeeEEECC
Confidence            889999999999988776534343

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.89  E-value=4.6e-20  Score=175.78  Aligned_cols=222  Identities=14%  Similarity=0.109  Sum_probs=156.6

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~  162 (421)
                      ...++++.+|++.+      .  +..++|++|++|+++++.+++++||+|+++...|.+....+    ...|++++.++.
T Consensus        65 ~~~~le~~lA~l~g------~--~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~  136 (433)
T PRK08134         65 TVAVLEERVAALEG------G--VGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP  136 (433)
T ss_pred             HHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence            36799999999873      2  34688999999999999988999999999999998764443    457888888764


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                      +       |++++++.+++++++|++.+|+||+|.+.   ++++|.++|+++|+++|+|.+++...    ...++ .++.
T Consensus       137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~---Di~~I~~la~~~gi~livD~t~a~~~----~~~pl-~~Ga  201 (433)
T PRK08134        137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVL---DIPTVAAIAHEAGVPLLVDSTFTTPY----LLRPF-EHGA  201 (433)
T ss_pred             C-------CHHHHHHhcCCCCeEEEEECCCcccCccc---CHHHHHHHHHHcCCEEEEECCCcccc----cCCch-hcCC
Confidence            2       78999999999999999999999999995   58999999999999999999987532    12233 3333


Q ss_pred             CCCEEEEcccccccCCCCceEEEEEeeCCCcchhH--------------------H-----HHHHHHh--hhcccccCCc
Q 014631          243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE--------------------L-----RIVDSIK--GYLNISSGPA  295 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~--------------------~-----~~~~~~~--~~~~~~~~~~  295 (421)
                      +   +++.|.+|.++.+|..+|.+++......+.+                    .     .+..+..  .........+
T Consensus       202 D---~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls  278 (433)
T PRK08134        202 D---LVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLS  278 (433)
T ss_pred             C---EEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCC
Confidence            3   8888999998888877777766321100000                    0     0000011  0111122344


Q ss_pred             hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          296 TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      +.....+..-|+     -+..+.++..++...+.+.|+++|.+.
T Consensus       279 ~~~A~l~~~gL~-----tl~~R~~~~~~nA~~la~~L~~~p~V~  317 (433)
T PRK08134        279 PMNAWQLLQGIE-----TLPLRMERHVANTRKVVAFLASHPAVA  317 (433)
T ss_pred             HHHHHHHhcCCC-----cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            444333333333     366777788888888999998887654

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.89  E-value=1.2e-19  Score=175.74  Aligned_cols=350  Identities=16%  Similarity=0.124  Sum_probs=213.4

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|++++||..|.-....+ ..+|.+.+++.+++++...  +... .+..+....+++.+.+.+. +...+.++|+++|+
T Consensus        86 ~dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGs  161 (504)
T PLN02760         86 INGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGS  161 (504)
T ss_pred             CCCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChH
Confidence            3489999998875443333 6789999999999987321  1111 1223444555555443222 12235799999999


Q ss_pred             HHHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhh-cCce------------eEeeeccCCCCc----------
Q 014631          120 QAIQVILTVLA-------RPG-ANILLPKPGFPLYEANARH-TRLE------------IRHFDLLPEKGW----------  168 (421)
Q Consensus       120 ~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~~------------~~~~~~~~~~~~----------  168 (421)
                      +|+..+++...       .++ .+|+..+.+|++....+.. .|..            +..++.+....+          
T Consensus       162 EA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  241 (504)
T PLN02760        162 EANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEF  241 (504)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHH
Confidence            99999998763       133 5788899999987544332 2221            111111000000          


Q ss_pred             -cCCHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          169 -EVDLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       169 -~~d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                       ....+++++.+.   ++..+.++..| +...|.+ .|++.+++|.++|++||+++|+||+++++++.|..+. ...++.
T Consensus       242 ~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~gv  320 (504)
T PLN02760        242 STRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYNI  320 (504)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcCC
Confidence             001234665552   23345567777 5556765 5678899999999999999999999999877776432 333333


Q ss_pred             CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHH
Q 014631          243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFF  314 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~  314 (421)
                      ..+   +.+|+|.++.+.+++|.++++        +++++.+...        ...+.+.++++++++.+.|+...++  
T Consensus       321 ~PD---ivtlgK~lggG~~PigAv~~~--------~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~--  387 (504)
T PLN02760        321 KPD---LVSLAKALSSAYMPIGAVLVS--------PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKER--  387 (504)
T ss_pred             CCc---EEEecccccCCccccceEeec--------HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhC--
Confidence            222   347899965433589998885        3577766431        1234567899999999888753322  


Q ss_pred             HHHHHHHHHHHHHHHHHhhc---CCCccccCCCCceeEEEEecCccccc-C-CCC----hHHHHHHHHhhcCeeEEeCCC
Q 014631          315 SKIVDILRDTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLE-G-ISD----DMEFALQLAKEESVIVLPGMA  385 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~~~~~~~ll~~~gv~v~~g~~  385 (421)
                       +..++.+++.+++.+.|++   .|.+..+ . .-|.++.+++...... . ...    ...+.. .+.++||.+.+.  
T Consensus       388 -~l~~~~~~~g~~l~~~L~~l~~~~~v~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~-~~~~~Gvl~~~~--  461 (504)
T PLN02760        388 -NIPEHVNKIAPRFQDGIKAFSGSPIIGEI-R-GTGLILGTEFVDNKSPNDPFPAEWGVGAYFGA-ECKKRGMLVRVA--  461 (504)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHhcCCCeeeE-E-eCceEEEEEEecCCcccccccchhHHHHHHHH-HHHhCCcEEEec--
Confidence             2344455555555555544   3322212 2 2255666666432110 0 000    223444 456789999763  


Q ss_pred             CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          386 VGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       386 ~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                         .+.+|++++  .++++|++++++|.+++.++
T Consensus       462 ---g~~lrl~Ppl~it~eeid~~~~~l~~al~~~  492 (504)
T PLN02760        462 ---GDNIMMSPPLIITPEEVDELISIYGKALKAT  492 (504)
T ss_pred             ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence               256899987  89999999999999998775

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=5.2e-20  Score=175.16  Aligned_cols=227  Identities=16%  Similarity=0.075  Sum_probs=156.5

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~  163 (421)
                      ...|++.++++.+        .+..+++++|+.|+..++.+++++||+|+++...|.+....    +...|++++.++ +
T Consensus        71 ~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d  141 (436)
T PRK07812         71 QDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D  141 (436)
T ss_pred             HHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence            5789999998873        23467788889999999999999999999999999876543    334677766663 2


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                      +     .|++++++++++++++|++.+|+||+|.+   .++++|.++|+++|+++|+|++++...    ...++ .++.+
T Consensus       142 ~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v---~Dl~~I~~la~~~gi~liVD~t~a~~~----~~~pl-~~GaD  208 (436)
T PRK07812        142 P-----DDLDAWRAAVRPNTKAFFAETISNPQIDV---LDIPGVAEVAHEAGVPLIVDNTIATPY----LIRPL-EHGAD  208 (436)
T ss_pred             C-----CCHHHHHHhCCCCCeEEEEECCCCCCCee---cCHHHHHHHHHHcCCEEEEECCCcccc----cCCch-hcCCC
Confidence            1     28899999999899999999999999999   458899999999999999999986522    11222 22222


Q ss_pred             CCEEEEcccccccCCCCceEEEEEeeCCCcchh-----------------------HHHHHHHHh--hhcccccCCchHH
Q 014631          244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ-----------------------ELRIVDSIK--GYLNISSGPATFV  298 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------------------~~~~~~~~~--~~~~~~~~~~~~~  298 (421)
                         +++.|++|.++..|--+|.+++........                       ++.++.+..  .........++..
T Consensus       209 ---ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~  285 (436)
T PRK07812        209 ---IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFN  285 (436)
T ss_pred             ---EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHH
Confidence               778999999988877677777642210000                       011111111  1112223445554


Q ss_pred             HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          299 QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ...+..-|+     -+..+.++..++...+.+.|+++|++.-+..|
T Consensus       286 a~l~~rgl~-----tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yP  326 (436)
T PRK07812        286 AFLIAQGLE-----TLSLRIERHVANAQRVAEFLEARDEVASVNYA  326 (436)
T ss_pred             HHHHhcCcC-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            444333333     36677788889999999999998876534344

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=8.1e-20  Score=174.55  Aligned_cols=226  Identities=16%  Similarity=0.136  Sum_probs=158.0

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~  163 (421)
                      ...|++.++++.+        .+..+++++|++|+.+++.+++++||+|+++.+.|.+...    .+...|++++.++. 
T Consensus        65 ~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~-  135 (427)
T PRK05994         65 NAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA-  135 (427)
T ss_pred             HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC-
Confidence            5788999999873        2357888999999999999999999999999999986543    35668888887753 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                            .|++++++.+++++++|++.+|+||+|.+++   +++|.++|+++|+++|+|++|+...    ...++ .++.+
T Consensus       136 ------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl-~~gaD  201 (427)
T PRK05994        136 ------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPI-EHGAD  201 (427)
T ss_pred             ------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCcc-ccCCc
Confidence                  2788999999889999999999999999965   7899999999999999999997522    12222 22332


Q ss_pred             CCEEEEcccccccCCCCceEEEEEeeCCCcchh-H----------HH-----HH-----------HHHhhhcccccCCch
Q 014631          244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ-E----------LR-----IV-----------DSIKGYLNISSGPAT  296 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-~----------~~-----~~-----------~~~~~~~~~~~~~~~  296 (421)
                         +++.|++|.++.+|-.+|.+++......+. .          +.     +.           .............++
T Consensus       202 ---ivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~  278 (427)
T PRK05994        202 ---IVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISP  278 (427)
T ss_pred             ---EEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCH
Confidence               888999999887776677666632110000 0          00     11           111111122223444


Q ss_pred             HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          297 FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .....+..-|+     -+..+.++.+++...+.+.|+++|++.-+..|
T Consensus       279 ~~A~l~~~~l~-----tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP  321 (427)
T PRK05994        279 FNAFLILTGIE-----TLPLRMQRHSDNALAVAEWLKGHPKVSWVNYA  321 (427)
T ss_pred             HHHHHHHcCcc-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            44444333343     36677778888889999999988876533333

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.88  E-value=3.1e-19  Score=171.27  Aligned_cols=349  Identities=17%  Similarity=0.157  Sum_probs=211.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.+++|+..|...... ...+|.+.+++.+++.+...  +....-..+....+|+.+....+. ...+.++++++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE  126 (441)
T PRK05769         51 VDGNVYLDFNAGIAVTNV-GHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTE  126 (441)
T ss_pred             CCCCEEEECCCchhhccc-CCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence            348889999888644333 35788999999999986321  111111134455566666543321 11368999999999


Q ss_pred             HHHHHHHHhc-CC-CCeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCC--Ccc---------CCHH
Q 014631          121 AIQVILTVLA-RP-GANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEK--GWE---------VDLD  173 (421)
Q Consensus       121 al~~~~~~l~-~~-gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~--~~~---------~d~e  173 (421)
                      |+..+++... .. .++|+....+|+++...+... +.             .+..++.+..-  .++         -+++
T Consensus       127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (441)
T PRK05769        127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD  206 (441)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence            9999987643 12 368889999999886544332 11             11222221100  000         0123


Q ss_pred             HHHh-hhc----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631          174 GLEA-LAD----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV  246 (421)
Q Consensus       174 ~l~~-~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  246 (421)
                      .+++ .+.    .+..+.++..| +...|.. .+.+.+++|.++|++||+++|+||+++++.+.|..+ ....++...++
T Consensus       207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi  285 (441)
T PRK05769        207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI  285 (441)
T ss_pred             HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence            3555 222    23445566777 5556775 467889999999999999999999999877666533 22223322233


Q ss_pred             EEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631          247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD  326 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  326 (421)
                      +   +++|.++ .|+++|++++++        ++.+........+.+.+++.++++.++|+...+    +..++.+++.+
T Consensus       286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~  349 (441)
T PRK05769        286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLEELEE----GLLENAQKLGE  349 (441)
T ss_pred             E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence            3   5889976 689999999863        344332222223446688899888888875322    44455556666


Q ss_pred             HHHHHhhc----CCCccccCCCCceeEEEEecCccccc-CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631          327 ICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLLE-GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE  399 (421)
Q Consensus       327 ~~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~  399 (421)
                      ++.+.|++    ++.+..+  ..-|.+..+.+...... .......+... +.++||.+.+..    .+.+|++++  .+
T Consensus       350 ~l~~~L~~l~~~~~~~~~v--rg~G~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~Gil~~~~~----~~~lr~~p~l~~t  422 (441)
T PRK05769        350 YLRKELKELKEKYEFIGDV--RGLGLMIGVELVKDRKEPDPKLRDKVLYE-AFKRGLLLLGAG----KSAIRIIPPLIIT  422 (441)
T ss_pred             HHHHHHHHHHHhCCCeeee--ecceEEEEEEeccCCccccHHHHHHHHHH-HHhCCcEEecCC----CCEEEEeCCCCCC
Confidence            66666654    3322211  22356666666322100 00012234443 467899987632    367999987  69


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 014631          400 PSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~  417 (421)
                      ++++++++++|.+++.++
T Consensus       423 ~~~id~~~~~l~~~l~~~  440 (441)
T PRK05769        423 EEEADIGLEILEEAIKEL  440 (441)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999998764

>PRK07482 hypothetical protein; Provisional

Probab=99.88  E-value=1.4e-19  Score=174.45  Aligned_cols=355  Identities=14%  Similarity=0.075  Sum_probs=218.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|..++||..|.-....+ ..+|.+.+++.+++++...  +... ....+.+..+|+.+.+..+  ...+.++++++|+
T Consensus        47 ~dG~~ylD~~sg~~~~~lG-h~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGS  121 (461)
T PRK07482         47 AQGRRYIDAFAGLYCVNVG-YGRTEVAEAIAEQAKELAY--YHTYVGHGTEASITLSKRIIDRAP--AGMSKVYYGLSGS  121 (461)
T ss_pred             CCCCEEEEcccchhhhcCC-CCCHHHHHHHHHHHHhcCc--cccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence            3589999998886544333 5689999999999987421  1111 1123455555555554332  2346899999999


Q ss_pred             HHHHHHHHHhc------C-CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC---cc------
Q 014631          120 QAIQVILTVLA------R-PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG---WE------  169 (421)
Q Consensus       120 ~al~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~------  169 (421)
                      +|+..+++...      . ++ .+|+....+|++....+...+.             .+..++.+....   ++      
T Consensus       122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  201 (461)
T PRK07482        122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF  201 (461)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence            99999998753      1 22 5789999999987544332221             111111111000   00      


Q ss_pred             --CCHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          170 --VDLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       170 --~d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                        -+++.+++.+.   ++..+.++..| +...|.. .+++.+++|.++|++||+++|.||+++++.+.|..+. ...++.
T Consensus       202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~~~~gv  280 (461)
T PRK07482        202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFG-SDHYGI  280 (461)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhh-HHhcCC
Confidence              13566777663   23345566777 5556766 5678899999999999999999999999987776432 233343


Q ss_pred             CCCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchh-
Q 014631          243 TVPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKED-  312 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~-  312 (421)
                      ..+++   +++|.+ ..|. ++|.++++        +++.+.+...        ...+.+.|+++++++.+.|+...++ 
T Consensus       281 ~PDiv---~~gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~  348 (461)
T PRK07482        281 EPDLI---TVAKGL-TSAYAPLSGSIVG--------EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN  348 (461)
T ss_pred             CCCEE---EEcccc-ccCccccceeeec--------HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence            33344   468995 4564 89998885        3566655421        1234578999999999988764332 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc-C-CCC----hHHHHHHHHhhcCeeEEeCCCC
Q 014631          313 FFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE-G-ISD----DMEFALQLAKEESVIVLPGMAV  386 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~~~~~~~ll~~~gv~v~~g~~~  386 (421)
                      ..++.++.-...++.+.+.++++|.+..+ . ..|.+..+++...... . ...    ...+.. .+.++||++.++.  
T Consensus       349 l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-r-G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~-~~~~~Gvl~~~~~--  423 (461)
T PRK07482        349 LVGNAAEVGAYFRARLRAAFGDHPLVGEV-R-GVGMLAAVEFVADRDDRTPFDPALKIGPQVSA-AALERGVIARAMP--  423 (461)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCEEEE-e-eceeEEEEEeccCCCcCCCCChhhHHHHHHHH-HHHHCCcEEecCC--
Confidence            23333333333344444444455443322 2 3356777777532100 0 000    123444 4467899986532  


Q ss_pred             CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          387 GMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       ..+.+|+.++  .+++++++++++|.++++++.+
T Consensus       424 -~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~  457 (461)
T PRK07482        424 -HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLG  457 (461)
T ss_pred             -CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence             1367899876  8999999999999999987644

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.88  E-value=7.7e-20  Score=172.16  Aligned_cols=213  Identities=16%  Similarity=0.157  Sum_probs=145.2

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~  163 (421)
                      ...|++.++++.+        .+..+++++|+.|+..++. ++++||+|++++|.|.+..    ..+...|+++..++. 
T Consensus        52 ~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~-  121 (380)
T PRK06176         52 RFALEELIADLEG--------GVKGFAFASGLAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT-  121 (380)
T ss_pred             HHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC-
Confidence            5789999999873        2234555666779887774 6689999999999997653    334567877776653 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                            .|++++++.+++++++|++.+|+||||.+.   ++++|.++|+++|+++|+|++|+...+ +.   ++ .++. 
T Consensus       122 ------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~---di~~I~~la~~~gi~vivD~t~a~~~~-~~---p~-~~ga-  186 (380)
T PRK06176        122 ------SDLSQIKKAIKPNTKALYLETPSNPLLKIT---DLAQCASVAKDHGLLTIVDNTFATPYY-QN---PL-LLGA-  186 (380)
T ss_pred             ------CCHHHHHHhcCcCceEEEEECCCCCCceec---CHHHHHHHHHHcCCEEEEECCcccccc-CC---cc-ccCC-
Confidence                  378999999988999999999999999995   488999999999999999999986432 11   22 2232 


Q ss_pred             CCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          244 VPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                        .+++.|++|.++.+|- -.|++++++       +++.+++....... ...++.....+...+     ..+..+.++.
T Consensus       187 --Divv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl-----~tl~~R~~~~  252 (380)
T PRK06176        187 --DIVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQNAIGGVLGPQDSWLLQRGI-----KTLGLRMEAH  252 (380)
T ss_pred             --CEEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHHHhcCCCCHHHHHHHHhcc-----CcHHHHHHHH
Confidence              2888999999876653 456666543       24555554433321 223333333322222     2234455555


Q ss_pred             HHHHHHHHHHhhcCCCcc
Q 014631          322 RDTADICYDRIKEIPCIT  339 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~  339 (421)
                      .++...+.+.|+++|.+.
T Consensus       253 ~~~a~~la~~L~~~p~v~  270 (380)
T PRK06176        253 QKNALCVAEFLEKHPKVE  270 (380)
T ss_pred             HHHHHHHHHHHHhCCCee
Confidence            667777788888776654

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.88  E-value=3.2e-19  Score=171.36  Aligned_cols=350  Identities=16%  Similarity=0.142  Sum_probs=208.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD--CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..|..++||..|...... ...+|.+.+++.+++++....  .|..    .+....+++.+.+..+  ...+.++++++|
T Consensus        50 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SG  122 (457)
T PRK05639         50 VDGNVFIDFLAGAAAAST-GYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSG  122 (457)
T ss_pred             CCCCEEEECCcCHHhhcc-CCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCch
Confidence            348899999877533222 357889999999999863211  1222    2333344444443222  223689999999


Q ss_pred             HHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCC--cc----CCH----
Q 014631          119 KQAIQVILTVLA--RPGANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKG--WE----VDL----  172 (421)
Q Consensus       119 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~d~----  172 (421)
                      ++|+..+++...  ....+|+....+|++....+... +.             ++..+|.+....  +.    -+.    
T Consensus       123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  202 (457)
T PRK05639        123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI  202 (457)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence            999999998753  22357888999999876544322 11             122233221000  00    022    


Q ss_pred             ----HHHHhhh-----ccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          173 ----DGLEALA-----DENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       173 ----e~l~~~~-----~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                          +.+++.+     .++..+.++..| +...|.. .|++.++++.++|++||+++|+||+++++.+.|..+. ...++
T Consensus       203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~g  281 (457)
T PRK05639        203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFA-SEWFE  281 (457)
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHH-HHhcC
Confidence                2344433     133445566677 5556765 5678899999999999999999999998876665322 22233


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                      ...+++   +++|.+ ..|.++|+++++        +++++........+.+.+++..+++.+.|+...++.   ..++.
T Consensus       282 v~PDiv---~~gK~l-~gG~pi~av~~~--------~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~---l~~~~  346 (457)
T PRK05639        282 VKPDLI---IFGKGV-ASGMGLSGVIGR--------KELMDLTSGSALLTPAANPVISAAAEATLEIIEEEN---LLKNA  346 (457)
T ss_pred             CCCCEE---Eechhh-cCCCcceeEEeh--------HHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHcc---HHHHH
Confidence            222333   378996 457899999985        356552221122345678888888888887533222   22333


Q ss_pred             HHHHHHHHHHhhc----CCCccccCCCCceeEEEEecCcccc-cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe
Q 014631          322 RDTADICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLL-EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF  396 (421)
Q Consensus       322 ~~~~~~~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~  396 (421)
                      +++.+++.+.|++    .+-+..+  ..-|.+..+++..... +.......+.. .+.++|+++.+...  ..+.+|+.+
T Consensus       347 ~~~g~~l~~~L~~l~~~~~~~~~V--rG~Gl~~gve~~~~~~~~~~~~~~~~~~-~~~~~Gv~~~~~g~--~~~~lr~~P  421 (457)
T PRK05639        347 LKVGEFIKKRLLEMKESFEVIGDV--RGKGLMIGVEIVKENGKPDPELTGKICW-RAFELGLILPSYGM--FGNVIRITP  421 (457)
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEee--ccceeEEEEEEecCCCCCCHHHHHHHHH-HHHhCCeEEeecCC--CCCEEEEeC
Confidence            3344444444433    4322212  2335666666632211 00001223444 44668999976421  147899998


Q ss_pred             c--CCHHHHHHHHHHHHHHHHHhh
Q 014631          397 A--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       397 ~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +  .+++++++++++|.+++++..
T Consensus       422 pl~it~~~id~~~~~l~~~l~~~~  445 (457)
T PRK05639        422 PLVITKEIAEKGLEIMERAIKDAL  445 (457)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHH
Confidence            8  799999999999999998764

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.88  E-value=4.6e-20  Score=170.50  Aligned_cols=353  Identities=16%  Similarity=0.123  Sum_probs=221.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .|+.++|-..|-=... .....+++.+|+.+++++-... .++ ....-.+|-+.++++.    + +-+-++|++++||+
T Consensus        42 ~G~r~lDg~sg~W~~~-~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~a----P-~~~l~~vFf~~sGS  115 (449)
T COG0161          42 DGRRYLDGMSGLWCVN-HGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELA----P-EGGLDHVFFTDSGS  115 (449)
T ss_pred             CCCEEEecccHHHHhh-cCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhC----C-CCCccEEEEeCCch
Confidence            4666666655532211 1235688999999999873211 111 1111245556666655    1 12367899999999


Q ss_pred             HHHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCC------CCcc--
Q 014631          120 QAIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPE------KGWE--  169 (421)
Q Consensus       120 ~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~------~~~~--  169 (421)
                      +|++.+++...       +|. .+++.-..+|++-.-.+.+.|.              .+..++.+..      ..+.  
T Consensus       116 eAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~  195 (449)
T COG0161         116 EAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEE  195 (449)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHH
Confidence            99999998753       243 3488889999876444433332              1112222110      1111  


Q ss_pred             --CCHHHHHhhhcc---CceEEEEeCC-CCC-cccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          170 --VDLDGLEALADE---NTVAMVIVNP-GNP-CGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       170 --~d~e~l~~~~~~---~~~~i~~~~p-~np-tG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                        -..++|++.+..   .+.+.++..| ... +|+. +|+..++++.++|++||+++|.||+-++|.++|+.+.. ...+
T Consensus       196 ~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~~g  274 (449)
T COG0161         196 FAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EHAG  274 (449)
T ss_pred             HHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hhcC
Confidence              125566665543   5677788888 344 7766 56678999999999999999999999999999986533 3333


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-c-----ccccCCchHHHHHHHHHhhccc-hhHH
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-L-----NISSGPATFVQGAVPQIFKNTK-EDFF  314 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~~~-~~~~  314 (421)
                      ...+++   +++|.+..+-+++|.++++        .++.+.+... .     ..+.+.++++++++.+.|+... +.++
T Consensus       275 i~PDi~---~~aKGLT~GY~Pl~a~l~~--------~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~  343 (449)
T COG0161         275 IVPDIL---CLAKGLTGGYLPLSAVLTS--------DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLL  343 (449)
T ss_pred             CCCCee---eecccccccchhhHhHhhh--------HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHH
Confidence            333344   6789977777889988885        3566766553 1     1356889999999999887644 3444


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC---CChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631          315 SKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI---SDDMEFALQLAKEESVIVLPGMAVGMKNW  391 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  391 (421)
                      ++.++.-....+.+.+.+.+.|.+..+  ..-|++..+++........   ......+...+.++|++++|.     .+.
T Consensus       344 ~~~~~~~~~l~~~L~~~l~~~p~VgdV--R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-----g~~  416 (449)
T COG0161         344 ERVAEIGAYLQAGLQAALADHPLVGDV--RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-----GDV  416 (449)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCcEEEe--eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-----CCE
Confidence            444433444444444444444555422  2346677777754321100   012344555677889999996     245


Q ss_pred             EEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          392 LRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +=+++.  .++++++++++.+.+++++..+
T Consensus       417 i~~~PPliit~~eid~l~~~l~~al~~~~~  446 (449)
T COG0161         417 IYLMPPLIITREEIDELVDALREALDETLA  446 (449)
T ss_pred             EEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence            556655  7999999999999999987654

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.88  E-value=5e-19  Score=169.70  Aligned_cols=348  Identities=16%  Similarity=0.166  Sum_probs=211.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|.+++||..|.-.... ...+|.+.+++.+++++.. ...+   ....+.+..+++.+.+..+  ...+.++++++|+
T Consensus        43 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~~~~~---~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGs  116 (442)
T PRK13360         43 HDGRRVLDGTAGLWCVNA-GHGRPEIVEAVRAQAGELDYAPAF---QMGHPKAFELANRIAEIAP--GGLNHVFFTNSGS  116 (442)
T ss_pred             CCCCEEEECchhHHHhcc-CCCCHHHHHHHHHHHHhCCCcccC---CcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence            358899999877533222 3578999999999998621 1111   1112344455555544332  2235899999999


Q ss_pred             HHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCC---CCccC-----
Q 014631          120 QAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPE---KGWEV-----  170 (421)
Q Consensus       120 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~---~~~~~-----  170 (421)
                      +|+..+++....       +| .+|+....+|++....+... |.            .+..+|....   ..+..     
T Consensus       117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  196 (442)
T PRK13360        117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH  196 (442)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence            999999876431       22 57999999999875443221 10            1122222110   00111     


Q ss_pred             ---CHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          171 ---DLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       171 ---d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                         ..+++++.+.   .+..+.+++.| +...|.. .+++.+++|.++|++||+++|+||+++++.+.|.... ...++.
T Consensus       197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv  275 (442)
T PRK13360        197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFA-AQYFGV  275 (442)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchh-hhhcCC
Confidence               1456666663   23345566777 5556765 5678899999999999999999999988876665432 222232


Q ss_pred             CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHH
Q 014631          243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFF  314 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~  314 (421)
                      ..+++   +++|.++...+++|.++++        .++++.+...        ...+.+.+++..+++.++|+...+.  
T Consensus       276 ~PDiv---t~gK~l~gG~~P~gav~~~--------~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~--  342 (442)
T PRK13360        276 TPDLL---TCAKGLTNGAIPMGAVFVS--------SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE--  342 (442)
T ss_pred             CCcee---eeeeccccCccceEEEEEc--------HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC--
Confidence            22222   7899975433789998885        3566655431        1234567888888888888753322  


Q ss_pred             HHHHHHHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631          315 SKIVDILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW  391 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  391 (421)
                       ...++.+++.+++.+.|+++   +.+..+ . ..|.+..+.+............++... +.++||.+.++     .+.
T Consensus       343 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-r-G~Gl~~~~~l~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~-----~~~  413 (442)
T PRK13360        343 -GLLTRAARLAPYWEDALHSLRDAPHVIDI-R-NLGLVGAVELAPRDGKPGKRAYEVFLK-CFEKGLMIRYT-----GDI  413 (442)
T ss_pred             -CHHHHHHHHHHHHHHHHHHhhcCCCeeee-e-ccceEEEEEEecCCCCcchhHHHHHHH-HHHCCcEEEec-----CCE
Confidence             23445555566666666543   222211 1 224444445532111000123345554 46679999764     257


Q ss_pred             EEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          392 LRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +|++++  .+++++++++++|.++++++
T Consensus       414 lr~~Ppl~~t~~eid~~~~~l~~~l~~~  441 (442)
T PRK13360        414 LALSPPLIIEEAQIDELFDILAQALKET  441 (442)
T ss_pred             EEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence            999977  89999999999999998764

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.87  E-value=3.4e-19  Score=171.18  Aligned_cols=352  Identities=13%  Similarity=0.059  Sum_probs=214.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|.-.... ...+|.+.+++.+++++.....  ...-..+....+++.+.+..+  ...+.++|+++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGse  125 (453)
T PRK06943         51 RDGRRYLDAISSWWVNLF-GHANPRINAALKDQLDTLEHAM--LAGCTHEPAIELAERLAALTG--GTLGHAFFASDGAS  125 (453)
T ss_pred             CCCCEEEEcchHHHHhcC-CCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCCHH
Confidence            458899999877433222 3578999999999998632110  000112344455555544332  22358999999999


Q ss_pred             HHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--cc--------
Q 014631          121 AIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WE--------  169 (421)
Q Consensus       121 al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~--------  169 (421)
                      |+..+++...       .+| .+|+....+|++....+...+.             .+..++.+...+  +.        
T Consensus       126 Ave~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  205 (453)
T PRK06943        126 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAA  205 (453)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHH
Confidence            9999998752       123 6799999999987544332221             112222211100  00        


Q ss_pred             CCHHHHHhhhcc--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          170 VDLDGLEALADE--NTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       170 ~d~e~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                      -+++++++.+..  +..+.++..|  +...|.. .|++.++++.++|++||+++|.||+++++.+.|..+ ....++...
T Consensus       206 ~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f-a~~~~gv~P  284 (453)
T PRK06943        206 RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF-ACEQAGVWP  284 (453)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh-HHHhCCCCC
Confidence            124666666642  3344556666  5667764 677889999999999999999999999987777543 223334333


Q ss_pred             CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchh-HHH
Q 014631          245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKED-FFS  315 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~  315 (421)
                      +++   +++|.++ .| +++|.++++        .++.+.+...       ...+.+.+++.++++.++|+...++ .++
T Consensus       285 Div---t~gKgl~-gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~  352 (453)
T PRK06943        285 DFL---CLSKGIS-GGYLPLSLVLSR--------DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLA  352 (453)
T ss_pred             CeE---eeehhhc-cCcccceEEEEc--------HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence            344   5689964 67 599999985        3566666421       1234567899999998888764332 233


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631          316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT  395 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~  395 (421)
                      +..+.-...++.+.+ +.+.+++..+ . .-|++..+++.............+.. .+.++||.+.+..     +.+|++
T Consensus       353 ~~~~~G~~l~~~L~~-l~~~~~v~~v-r-G~Gl~~gvel~~~~~~~~~~~~~i~~-~~~~~Gll~~~~g-----~~l~~~  423 (453)
T PRK06943        353 RNARKSARLRAALAP-LAAHPQVRHL-R-QRGTIFAFDVALDGDAARTFSRRFFE-AALERELLLRPIG-----TTVYLM  423 (453)
T ss_pred             HHHHHHHHHHHHHHH-HhcCCCEEeE-e-ccccEEEEEEccCCCcchHHHHHHHH-HHHHCCcEEEecC-----CEEEEe
Confidence            333333333333332 2334555422 2 33566667775211000000223444 4567899997642     469999


Q ss_pred             ec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          396 FA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       396 ~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++  .+++++++++++|.+++++..+
T Consensus       424 Ppl~it~~eid~~~~~l~~al~~~~~  449 (453)
T PRK06943        424 PPYVLDDDEIAWLAERTRATLDATLA  449 (453)
T ss_pred             CCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence            66  8999999999999999987643

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=3.9e-19  Score=162.58  Aligned_cols=313  Identities=20%  Similarity=0.250  Sum_probs=210.5

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcC
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPK  140 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~  140 (421)
                      ......+++.+.++.+.... ++.  ..++++++++|++        ....+.++++|.|+.+++++| ++|||.|+++.
T Consensus        13 i~~~e~~~v~~vl~sg~i~~-G~~--v~~FE~~~ae~~G--------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps   81 (374)
T COG0399          13 IGEEELAAVQEVLKSGWLTG-GPF--VRRFEQAFAEYLG--------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPS   81 (374)
T ss_pred             cchHHHHHHHHHHHcCCeec-ChH--HHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence            34667788888888865533 544  5899999999983        567899999999999999966 58999999999


Q ss_pred             CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631          141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS  220 (421)
Q Consensus       141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  220 (421)
                      -+|..........|++++++.++++ .+.+|++.+|+++.+++|+|+.++   -.|..   .++++|.++|++||++||+
T Consensus        82 ~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVh---l~G~~---~dm~~i~~la~~~~l~vIE  154 (374)
T COG0399          82 FTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVH---LAGQP---CDMDAIMALAKRHGLPVIE  154 (374)
T ss_pred             CchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEeh---hccCC---CCHHHHHHHHHHcCCeEEE
Confidence            9999999999999999999998764 567999999999999999998443   45666   4688999999999999999


Q ss_pred             cccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc------
Q 014631          221 DEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS------  291 (421)
Q Consensus       221 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------  291 (421)
                      |.+++.+. +.|..   +..++.    +.+.||.  |.+.. | -.|.+++++       +++.++++..+...      
T Consensus       155 DaAqa~Ga~y~gk~---vGt~Gd----~~~fSF~~~K~itt-g-EGGav~tnd-------~ela~k~~~lr~hG~~~~~~  218 (374)
T COG0399         155 DAAQAHGATYKGKK---VGSFGD----IGAFSFHATKNLTT-G-EGGAVVTND-------EELAEKARSLRNHGLSRDAV  218 (374)
T ss_pred             EcchhccCeecCcc---cccccc----eEEEEecCCCCccc-c-CceEEEeCC-------HHHHHHHHHHHHhCcCCCcc
Confidence            99998855 33332   222322    4555665  76433 3 458888865       34666554433210      


Q ss_pred             -------cCCc--hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce----eEEEEecCccc
Q 014631          292 -------SGPA--TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS----MFVMVKLNLSL  358 (421)
Q Consensus       292 -------~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~----~~~~~~~~~~~  358 (421)
                             .+.|  -....|+.-..   .-+.+++..++-++..+...+.|++++++.....+.+.    ..+.+.++.. 
T Consensus       219 ~~y~~~~~G~N~rm~~iqAAigl~---QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-  294 (374)
T COG0399         219 FKYLHEELGYNYRLTEIQAAIGLA---QLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-  294 (374)
T ss_pred             ccceeeecccccCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-
Confidence                   0111  11122211111   12445666666667777888888887766533333332    1222333321 


Q ss_pred             ccCCCChHHHHHHHHhhcCee----EEeCCCC--------C---C--------CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          359 LEGISDDMEFALQLAKEESVI----VLPGMAV--------G---M--------KNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~----v~~g~~~--------~---~--------~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                          ....+.+...|++.||.    ..|-+..        .   .        ...+.+-+.  .++++++++++.|+++
T Consensus       295 ----~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~  370 (374)
T COG0399         295 ----GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEV  370 (374)
T ss_pred             ----CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence                12445555566888554    4442211        0   0        234555554  6889999999999998


Q ss_pred             HHH
Q 014631          414 CQR  416 (421)
Q Consensus       414 ~~~  416 (421)
                      +.+
T Consensus       371 ~~~  373 (374)
T COG0399         371 LGS  373 (374)
T ss_pred             hcc
Confidence            754

>PRK05965 hypothetical protein; Provisional

Probab=99.87  E-value=2.4e-19  Score=172.68  Aligned_cols=350  Identities=13%  Similarity=0.092  Sum_probs=213.8

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|......+ ..+|++.+++.+++++... .........+.+..+++.+.+..+  .+.+.++++++|++
T Consensus        43 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~-~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSE  118 (459)
T PRK05965         43 ASGHQLLDAFAGLWCVNVG-YGQESIVEAAAEQMRELPY-ATGYFHFGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSD  118 (459)
T ss_pred             CCCCEEEECcccHHhccCC-CCCHHHHHHHHHHHHhcCC-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhH
Confidence            4588999998775443222 4689999999999987321 000001112333445555544322  23468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCC--CCccCC------
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPE--KGWEVD------  171 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~--~~~~~d------  171 (421)
                      |+..+++....       ++ .+|+....+|++....+... +.            .+..++.+..  ..+.-|      
T Consensus       119 Ave~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (459)
T PRK05965        119 AVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIA  198 (459)
T ss_pred             HHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHH
Confidence            99999986431       33 57999999999875433221 11            0112221110  001112      


Q ss_pred             --HHHHHhhhcc---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          172 --LDGLEALADE---NTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       172 --~e~l~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                        ++++++.+..   +..+.++..| +...|.. .|++.++++.++|++||+++|.||+++++.+.|..+ ....++...
T Consensus       199 ~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~P  277 (459)
T PRK05965        199 ASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVP  277 (459)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhhcCCCC
Confidence              2456666642   3345556666 6666765 577889999999999999999999999998777643 333344333


Q ss_pred             CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHHH
Q 014631          245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      +++   +++|.+ ..| +++|.++++        +++++.+...        ...+.+.++++++++.++|+...++.  
T Consensus       278 Div---~~gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~--  343 (459)
T PRK05965        278 DLM---TVAKGL-TSGYVPMGAVLMS--------DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGG--  343 (459)
T ss_pred             CeE---Eechhh-ccCCcceeEEEEc--------HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhcc--
Confidence            344   568995 567 599999985        3566666421        12355788999999988887533322  


Q ss_pred             HHHHHHHHHHHHHHHHhhc---CCCccccCCCCceeEEEEecCcccc-cCC-C---C-hHHHHHHHHhhcCeeEEeCCCC
Q 014631          316 KIVDILRDTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLL-EGI-S---D-DMEFALQLAKEESVIVLPGMAV  386 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~---~-~~~~~~~ll~~~gv~v~~g~~~  386 (421)
                       ..++.+++.+++.+.|++   .|.+..+ . .-|++..+++..... ... .   . ...+. ..+.++||++.+..  
T Consensus       344 -l~~~~~~~g~~l~~~l~~l~~~~~v~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~-~~~~~~Gll~~~~g--  417 (459)
T PRK05965        344 -LLANGQKAGPRFAAGLDALRAHPLVGDV-R-GRGLLGALELVADKATKTPFDAALDPADRIF-DRAYANGLVFRAFG--  417 (459)
T ss_pred             -HHHHHHHHHHHHHHHHHhhccCCCEEEE-e-ecceEEEEEEeccccccCCCCchhHHHHHHH-HHHHhCCeEEEecC--
Confidence             223344444444555543   3333312 2 335666666642110 000 0   0 12334 34567899997631  


Q ss_pred             CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          387 GMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                        .+.+|+.++  .+++++++++++|.++++++
T Consensus       418 --~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~  448 (459)
T PRK05965        418 --DGVLGFAPALCCTEGEFDLIFERTRKTLDDV  448 (459)
T ss_pred             --CcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence              357899987  79999999999999999875

>PRK02769 histidine decarboxylase; Provisional

Probab=99.87  E-value=7.7e-19  Score=164.55  Aligned_cols=290  Identities=15%  Similarity=0.110  Sum_probs=203.6

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCc--EEEcCCHHHHHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDD--VYLTAGCKQAIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  163 (421)
                      ..++++.+.+++.+.+|.+  +++  .++|+|||+++...+...  ..+++.|++++..|++....++..|.+...++.+
T Consensus        63 ~~~~e~~~~~~~a~l~g~~--~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~  140 (380)
T PRK02769         63 SFDFERDVMNFFAELFKIP--FNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL  140 (380)
T ss_pred             hHHHHHHHHHHHHHHhCCC--CCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence            4577777777777777643  344  488999999987665443  2578899999999999999999999998888875


Q ss_pred             CCCCccCCHHHHHhhhccC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC---cEEEEcccccccccCC-CCccc
Q 014631          164 PEKGWEVDLDGLEALADEN---TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG---IMVISDEVYDHLTFGS-TPYVR  236 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~De~~~~~~~~~-~~~~~  236 (421)
                      +  ++.+|+++|++.++++   +.+|+++.++|+||.+   +++++|+++|+++|   +++++|.+|+.+...- ....+
T Consensus       141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~  215 (380)
T PRK02769        141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP  215 (380)
T ss_pred             C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence            4  4569999999998775   8888999999999999   66889999999998   6999999998854210 00001


Q ss_pred             ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc--------ccccCCchHHHHHHHHHhhc
Q 014631          237 MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--------NISSGPATFVQGAVPQIFKN  308 (421)
Q Consensus       237 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~  308 (421)
                      +. ... +-..+..|.||+++ ....+|++++++.        ..+.+....        ...++.+.....++..+|+.
T Consensus       216 ~d-~~~-~vDsis~s~HK~~~-~P~g~G~l~~r~~--------~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~  284 (380)
T PRK02769        216 FS-FAD-GIDSIAISGHKFIG-SPMPCGIVLAKKK--------YVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS  284 (380)
T ss_pred             CC-ccC-CCCEEEECCcccCC-CCCCcEEEEEehh--------hhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence            11 111 11255669999964 3355899998742        222221110        11234455566667777776


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631          309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM  388 (421)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  388 (421)
                      ....++++..++..++.+++.+.|++. |+..+..|. .+.+.++.+         +.+    +.  +|..+.+-     
T Consensus       285 lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~-~~~v~f~~~---------~~~----~~--~~w~l~~~-----  342 (380)
T PRK02769        285 LGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPN-SITVVFPCP---------SER----IW--KKWHLATS-----  342 (380)
T ss_pred             HCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC-ceEEEEcCC---------CHH----HH--hCeeEccc-----
Confidence            667889999999999999999999886 887665565 333433322         112    12  35555442     


Q ss_pred             CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          389 KNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       389 ~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ++++|+++.  ++++.++.+++.|.+.+...
T Consensus       343 ~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~  373 (380)
T PRK02769        343 GNQAHIITMPHHNKQQIDSLIDELIFDLKNP  373 (380)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence            258999987  68899999999999887644

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.87  E-value=1.5e-19  Score=184.34  Aligned_cols=313  Identities=12%  Similarity=0.097  Sum_probs=214.7

Q ss_pred             CCCCCCC---CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH----HHHHHHHHHhcCC-CC----eEEEcCCCCcch
Q 014631           79 FDCYSPS---VGILPARRAIADYLNSELPCKLSPDDVYLTAGCK----QAIQVILTVLARP-GA----NILLPKPGFPLY  146 (421)
Q Consensus        79 ~~~y~~~---~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~----~al~~~~~~l~~~-gd----~Vl~~~p~y~~~  146 (421)
                      ++-|.|.   +|+.++-..+.+++.+..|    .+.|.++++++    ++++.+++.+.++ ||    .|+++...|.+.
T Consensus       554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn  629 (993)
T PLN02414        554 IHPFAPVDQAQGYQEMFEDLGDLLCEITG----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTN  629 (993)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccC
Confidence            3455543   3544444444444444444    28999999998    8999999999866 88    899999999998


Q ss_pred             HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631          147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV  223 (421)
Q Consensus       147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~  223 (421)
                      ...+...|++++.++.+.  ++.+|+++|++.+++   ++++|++++|+|-+|..   .++++|+++|+++|+++++|.+
T Consensus       630 ~a~a~~~G~~vv~v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgA  704 (993)
T PLN02414        630 PASAAMCGMKIVVVGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGA  704 (993)
T ss_pred             HHHHHHCCCEEEEeccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEec
Confidence            888888999999999853  346999999999984   67899999999999998   6799999999999999999999


Q ss_pred             ccccccCCCCcccccccCCCCCEEEEcccccccCC----CCceEEEEEeeCCCcchhHHHHHHHHhh------------h
Q 014631          224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV----PGWRLGWLVTSDPSGILQELRIVDSIKG------------Y  287 (421)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~------------~  287 (421)
                      +.....   .......++.+   ++++|.+|+|+.    +|..+|++.+..        .+...+-.            .
T Consensus       705 q~~a~~---~l~~p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~--------~L~p~lPg~~v~~~~~~~~r~  770 (993)
T PLN02414        705 NMNAQV---GLTSPGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVPTGGIPRPE  770 (993)
T ss_pred             CHHhcc---CcCCccccCCC---EEEecCCccCCcCcccCCCCeeeEEEch--------hhcccCCCCccccCCCccccc
Confidence            965210   12222344443   788899997763    345689998853        12222110            0


Q ss_pred             ccc-ccC------CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEE--EEecCccc
Q 014631          288 LNI-SSG------PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV--MVKLNLSL  358 (421)
Q Consensus       288 ~~~-~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~--~~~~~~~~  358 (421)
                      ... .++      .+.....++..++.....+++.+..++...+.+++.+.|++..++. ...|.+.++.  .+.++  .
T Consensus       771 ~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~-~~~~~~~~~hEfv~~~~--~  847 (993)
T PLN02414        771 KTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL-FRGKNGTCAHEFIIDLR--P  847 (993)
T ss_pred             CCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCeeeeEEEecc--c
Confidence            100 011      1113333444555544567888888899999999999998743444 2233333221  12333  1


Q ss_pred             ccC--CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          359 LEG--ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       359 ~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++.  ..+..++..+|+ ++|+.... ..|-..+.+|++++  ++++|||+++++|.++.++..+
T Consensus       848 l~~~~g~~~~di~krL~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~  910 (993)
T PLN02414        848 FKNTAGIEPEDVAKRLM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD  910 (993)
T ss_pred             cccccCCCHHHHHHHHH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence            110  124577777776 78997644 33444789999998  8899999999999998877653

>PRK06105 aminotransferase; Provisional

Probab=99.87  E-value=4.2e-19  Score=171.10  Aligned_cols=350  Identities=16%  Similarity=0.132  Sum_probs=213.8

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|++++||..|......+ ..+|.+.+++.+++++... ..+  .....+.+..+++.+.+..+  ..-+.++++++|+
T Consensus        45 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  119 (460)
T PRK06105         45 DAGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMKKLPFYHTF--SHKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGS  119 (460)
T ss_pred             CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHHhCCCeecc--cccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence            4589999998885443332 5689999999999987321 111  01122444445555544332  2236899999999


Q ss_pred             HHHHHHHHHhc------C-CC-CeEEEcCCCCcchHHHHhhcCc-e------------eEeeeccCCCCcc---------
Q 014631          120 QAIQVILTVLA------R-PG-ANILLPKPGFPLYEANARHTRL-E------------IRHFDLLPEKGWE---------  169 (421)
Q Consensus       120 ~al~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~~g~-~------------~~~~~~~~~~~~~---------  169 (421)
                      +|+..+++...      . +| .+|+....+|++....+...+. .            +..++.+....+.         
T Consensus       120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  199 (460)
T PRK06105        120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAF  199 (460)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHH
Confidence            99999998742      1 23 5788889999987644432211 1            1111111000000         


Q ss_pred             --CCHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          170 --VDLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       170 --~d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                        ...+++++.+.   ++..+.++..| +...|.. .|++.++++.++|++||+++|+||+++++.+.|..+ ....++.
T Consensus       200 ~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~~~v  278 (460)
T PRK06105        200 ATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCETFGI  278 (460)
T ss_pred             HHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHhcCC
Confidence              01345666552   23345566777 5566765 578889999999999999999999999887777543 2333333


Q ss_pred             CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHH
Q 014631          243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFF  314 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~  314 (421)
                      ..+++   +++|.++...+++|.++++        +++.+.+...        ...+.+.++++.+++.+.|+...+.  
T Consensus       279 ~PDi~---~~gK~lggG~~P~~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~--  345 (460)
T PRK06105        279 KPDIL---VMSKQLSSSYQPLSAVLMN--------EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEER--  345 (460)
T ss_pred             CCCee---eeecccccCcccceEEEEc--------HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence            32333   6889975433689999985        3566665431        1234578889999888888753322  


Q ss_pred             HHHHHHHHHHHHHHHHHhh---cCCCccccCCCCceeEEEEecCccccc--CCCC----hHHHHHHHHhhcCeeEEeCCC
Q 014631          315 SKIVDILRDTADICYDRIK---EIPCITCPRKPEGSMFVMVKLNLSLLE--GISD----DMEFALQLAKEESVIVLPGMA  385 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~ll~~~gv~v~~g~~  385 (421)
                       +..++.+++.+++.+.|+   +.|.+..+ . .-|++..+++......  ....    ...+.. .+.++||.+.+.  
T Consensus       346 -~l~~~v~~~g~~l~~~L~~l~~~~~v~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~-~~~~~Gvl~~~~--  419 (460)
T PRK06105        346 -DLVGNAAERGARLQARLRALADHPLVGEV-R-GVGLIAAVELVADKATKTPFEPPGKVGARANA-AAHEHGVISRAM--  419 (460)
T ss_pred             -cHHHHHHHHHHHHHHHHHHhhcCCCeEEE-E-ecceEEEEEEecCcccCCCCCchhHHHHHHHH-HHHHCCeEEEec--
Confidence             233344444444444444   34333212 2 2356666666421100  0000    123444 456789999873  


Q ss_pred             CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          386 VGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       386 ~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                         .+.+|++++  .+++++++++++|.++++++.
T Consensus       420 ---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~  451 (460)
T PRK06105        420 ---GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA  451 (460)
T ss_pred             ---CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence               258999987  699999999999999998764

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.87  E-value=6.5e-21  Score=174.22  Aligned_cols=230  Identities=17%  Similarity=0.160  Sum_probs=157.0

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL  163 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  163 (421)
                      |..-+.++++.+|++++      . .+.+++++|+++++..++.+++++||+|+++.++|.+....+...|+++++++..
T Consensus        57 ~~g~i~~~~~~~A~~~g------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~  129 (294)
T cd00615          57 PTGPIKEAQELAARAFG------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPE  129 (294)
T ss_pred             CChHHHHHHHHHHHHhC------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCc
Confidence            33346799999999883      2 3345569999999999999999999999999999999998999999999888765


Q ss_pred             CCCC----ccCCHHHHHhhhc--cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc-ccCCCCccc
Q 014631          164 PEKG----WEVDLDGLEALAD--ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL-TFGSTPYVR  236 (421)
Q Consensus       164 ~~~~----~~~d~e~l~~~~~--~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~  236 (421)
                      .+.+    ..+|++++++.++  ++++++++++| |++|.+++   +++|+++|+++|+++|+|++|+.. .+.+.....
T Consensus       130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~  205 (294)
T cd00615         130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS  205 (294)
T ss_pred             cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcc
Confidence            4433    3689999999885  46788999998 68999965   889999999999999999999753 233321111


Q ss_pred             ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHH
Q 014631          237 MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSK  316 (421)
Q Consensus       237 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  316 (421)
                      ..   ..+..+++.|+||++  +|++.|+++..+.. ......+...+...  .+++++.....++..++... ...-.+
T Consensus       206 ~~---~~~~div~~S~hK~l--~g~~~~~~l~~~~~-~~~~~~~~~~~~~~--~ttsps~~~~asl~~a~~~~-~~~g~~  276 (294)
T cd00615         206 AA---MAGADIVVQSTHKTL--PALTQGSMIHVKGD-LVNPDRVNEALNLH--QSTSPSYLILASLDVARAMM-ALEGKE  276 (294)
T ss_pred             hh---hcCCcEEEEchhccc--chHhHHHHHHhCCC-cCCHHHHHHHHHHH--CCCCcHHHHHHHHHHHHHHH-HHHhHH
Confidence            11   123458899999984  67766554433221 11111222222221  23466666666666655432 122234


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 014631          317 IVDILRDTADICYDRIK  333 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~  333 (421)
                      ..++..++.+.+++.+.
T Consensus       277 ~~~~~~~~~~~~r~~l~  293 (294)
T cd00615         277 LVEELIELALYARQEIN  293 (294)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            45556666666666654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK06062 hypothetical protein; Provisional

Probab=99.87  E-value=9e-19  Score=168.38  Aligned_cols=351  Identities=15%  Similarity=0.134  Sum_probs=212.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|.-.... ...+|.+.+++.+++++...  +.+ ....+.+..+++.+....+  ...+.++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE  123 (451)
T PRK06062         50 YEGRRYLDFSSQLVNTNI-GHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNGGAD  123 (451)
T ss_pred             CCCCEEEEcccCHHhhcC-CCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHH
Confidence            458899999887543322 35788999999999987321  111 1123444555555544332  22468999999999


Q ss_pred             HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhcCc-e-----------eEeeeccCCC--Ccc--CC-------HHHH
Q 014631          121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARHTRL-E-----------IRHFDLLPEK--GWE--VD-------LDGL  175 (421)
Q Consensus       121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g~-~-----------~~~~~~~~~~--~~~--~d-------~e~l  175 (421)
                      |+..+++... ..| .+|+....+|+++...+..... .           +..++.+...  .|.  -|       ++.+
T Consensus       124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l  203 (451)
T PRK06062        124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL  203 (451)
T ss_pred             HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence            9999988653 133 6799999999988654443211 0           1111111100  010  01       5667


Q ss_pred             Hhhhcc---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          176 EALADE---NTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       176 ~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                      ++.+..   +..+.++..| +...|.+ .|++.++++.++|++||+++|+||+++++.+.|..+ ....++...+++   
T Consensus       204 e~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PDi~---  279 (451)
T PRK06062        204 ERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPDLI---  279 (451)
T ss_pred             HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCCee---
Confidence            776642   3345566667 5556766 577889999999999999999999999987666532 222233222233   


Q ss_pred             ccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh---cccccCCchHHHHHHHHHhhccchhHHHHHHHHH--HHH
Q 014631          251 SMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY---LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL--RDT  324 (421)
Q Consensus       251 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~  324 (421)
                      +++|.++ .| +++|.++++        +++++.+...   ...+.+.++++++++.++|+...++.+.++.++.  ...
T Consensus       280 t~gK~lg-gG~~Pigav~~~--------~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l  350 (451)
T PRK06062        280 TFAKGVN-SGYVPLGGVAIS--------EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVL  350 (451)
T ss_pred             eechhhh-cCCcCcEEEEEc--------HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            6899964 56 489999985        3567766432   1235577889999988888753332222222222  123


Q ss_pred             HHHHHHHhhcCCCccccCCCCceeEEEEecCcccc-cC-C-C------ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631          325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL-EG-I-S------DDMEFALQLAKEESVIVLPGMAVGMKNWLRIT  395 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~-~------~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~  395 (421)
                      ++.+.+...+.|.+..+ .. -|.+..+++..... .. . .      ....+... +.++||++.+.     .+.+|++
T Consensus       351 ~~~L~~l~~~~~~v~~v-rG-~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~-----~~~lrl~  422 (451)
T PRK06062        351 GPGLRELAERHPSVGEV-RG-LGVFWALELVADRETREPLAPYGASSAAMAAVKAA-CKERGLLPFVN-----GNRIHVV  422 (451)
T ss_pred             HHHHHHHHhcCCcEEeE-ec-cccEEEEEEcccccccCCCcccchhhHHHHHHHHH-HHHCCcEEeec-----CCEEEEE
Confidence            33444333334333212 22 35566666642110 00 0 0      02244444 56789998652     3579998


Q ss_pred             ec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          396 FA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       396 ~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++  .++++|++++++|.++++++.
T Consensus       423 ppl~~t~~eid~~~~~l~~~l~~~~  447 (451)
T PRK06062        423 PPCTVTEDEVREGLAILDAALAVAD  447 (451)
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHhh
Confidence            85  799999999999999998764

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.87  E-value=2.6e-19  Score=170.55  Aligned_cols=342  Identities=13%  Similarity=0.132  Sum_probs=212.8

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|+.++|+..|...... ...+|.+.+++.+++++.....+..  ...+....+++.+.+..+  ...+.++++++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsE  114 (428)
T PRK07986         40 ADGRRLVDGMSSWWAAIH-GYNHPQLNAAMKSQIDAMSHVMFGG--ITHPPAIELCRKLVAMTP--QPLECVFLADSGSV  114 (428)
T ss_pred             CCCCEEEEcchhHHhhcC-CCCCHHHHHHHHHHHhhcCCccccc--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence            458899999887533222 2467999999999998732111111  112444555555554332  22468999999999


Q ss_pred             HHHHHHHHhcC------C-CCeEEEcCCCCcchHHHHhhc-Cce-------------eEeeeccCCC---Cc-cCCHHHH
Q 014631          121 AIQVILTVLAR------P-GANILLPKPGFPLYEANARHT-RLE-------------IRHFDLLPEK---GW-EVDLDGL  175 (421)
Q Consensus       121 al~~~~~~l~~------~-gd~Vl~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~---~~-~~d~e~l  175 (421)
                      |+..+++....      . ..+|+....+|++....+... +..             +..++.....   .+ .-|++++
T Consensus       115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l  194 (428)
T PRK07986        115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPF  194 (428)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHH
Confidence            99999886532      2 368999999999865443332 110             1112211000   00 1145677


Q ss_pred             Hhhhcc--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          176 EALADE--NTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       176 ~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                      ++.+..  +..+.++..|  +.-.|+. .+++.+++|.++|++||+++|+||++.++.+.|..+. ...++...+++   
T Consensus       195 ~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa-~~~~gv~PDi~---  270 (428)
T PRK07986        195 ARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFA-CEHAGIAPDIL---  270 (428)
T ss_pred             HHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeee-ecccCCCCCEE---
Confidence            776642  2344556666  4555654 4668999999999999999999999988766665432 22233222233   


Q ss_pred             ccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631          251 SMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD  323 (421)
Q Consensus       251 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  323 (421)
                      +++|.++ .| +++|.++++        +++++.+...      ...+.+.++++.+++.++|+...+.   +..++.++
T Consensus       271 t~gK~l~-gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~---~~~~~~~~  338 (428)
T PRK07986        271 CLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG---DWQQQVAA  338 (428)
T ss_pred             Eechhhh-CCcccCcchhch--------HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHH
Confidence            5899974 66 588888885        3677776542      1234567888888888888753322   23445555


Q ss_pred             HHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C
Q 014631          324 TADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I  398 (421)
Q Consensus       324 ~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~  398 (421)
                      +.+++.+.|+++   +.+..+ . ..|++..+.+....     ....+... +.++||++.+.     .+.+|+.++  .
T Consensus       339 ~g~~l~~~l~~l~~~~~i~~v-R-g~Gl~~~ve~~~~~-----~~~~~~~~-l~~~Gl~~~~~-----g~~i~~~Ppl~i  405 (428)
T PRK07986        339 IEAQLREELAPLRDAPMVADV-R-VLGAIGVVETTRPV-----NMAALQRF-FVEQGVWIRPF-----GKLIYLMPPYII  405 (428)
T ss_pred             HHHHHHHHHHHHhcCCCEEeE-e-ccceEEEEEeCCcc-----cHHHHHHH-HHHCCcEEEec-----CCEEEEeCCCCC
Confidence            555555555543   333311 1 23556666665321     23445444 56789999874     258999877  7


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 014631          399 EPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       399 ~~e~l~~~~~~l~~~~~~  416 (421)
                      +++++++++++|.+++++
T Consensus       406 t~~ei~~~~~~l~~~l~~  423 (428)
T PRK07986        406 LPEQLQRLTAAVNRAVQD  423 (428)
T ss_pred             CHHHHHHHHHHHHHHHhh
Confidence            999999999999999864

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.87  E-value=9.7e-19  Score=168.39  Aligned_cols=354  Identities=13%  Similarity=0.061  Sum_probs=218.3

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC---CCCCcEEEcCC
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK---LSPDDVYLTAG  117 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~---~~~~~i~~~~g  117 (421)
                      ..|..++|+..|.-....+ ..+|.+.+++.+++++-.. .. ...-..+.+..+++.+....+..   ...+.++++++
T Consensus        61 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~l~~-~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s  137 (472)
T PRK08742         61 HDGRRYLDAVSSWWTNLFG-HAEPRIGAAIAAQAGELEQ-VM-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN  137 (472)
T ss_pred             CCCCEEEEcCccHHhccCC-CCCHHHHHHHHHHHHhCCC-cc-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence            4588999998885443222 5688999999999875211 10 10111244555566555433211   12358999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCC--CccC----
Q 014631          118 CKQAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEK--GWEV----  170 (421)
Q Consensus       118 ~~~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~----  170 (421)
                      |++|+..+++....       +| .+|+....+|++....+...+..             +..+|.+...  .++.    
T Consensus       138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~  217 (472)
T PRK08742        138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED  217 (472)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence            99999999886531       33 68999999999876554433211             1122211100  0011    


Q ss_pred             ----CHHHHHhhhc--cCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          171 ----DLDGLEALAD--ENTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       171 ----d~e~l~~~~~--~~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                          +++.+++.+.  ++..+.++..|  ++..|.. .|++.++++.++|++||+++|.||+++++.+.|..+ ....++
T Consensus       218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~-a~e~~g  296 (472)
T PRK08742        218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLF-ACEQAG  296 (472)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-HHHhcC
Confidence                2456666653  23445567777  5666764 677889999999999999999999999998777543 233334


Q ss_pred             CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchhH
Q 014631          242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKEDF  313 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~  313 (421)
                      ...+++   +++|.+ .+| +++|.++++        +++++.+...       ...+.+.++++++++.++|+...++.
T Consensus       297 v~PDiv---~~gKgl-~gG~~Plaav~~~--------~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~  364 (472)
T PRK08742        297 VMPDLL---CLSKGL-TGGFLPLSAVLAT--------QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDD  364 (472)
T ss_pred             CCCCEE---EEcccc-cCCCCCcceeecc--------HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCC
Confidence            333344   568995 457 489999985        3566655421       12345788999999988887644444


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC-C-CCh----HHHHHHHHhhcCeeEEeCCCCC
Q 014631          314 FSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG-I-SDD----MEFALQLAKEESVIVLPGMAVG  387 (421)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~~~~~~ll~~~gv~v~~g~~~~  387 (421)
                      +-++.++..+....+.+.++++|.+..+ . .-|++..+++....... . ...    ..+. ..+.++||++.+.    
T Consensus       365 l~~~~~~~g~~l~~~~~~~~~~~~i~dv-R-G~Gl~~giel~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gll~~~~----  437 (472)
T PRK08742        365 VIARNQPTAARMTQLAAQIGEHPHVADV-R-QAGMVVAFELTRGGNKRTPFPPAARVGLHAY-RAALARGVVLRPL----  437 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeeeE-e-ccceEEEEEeccCccccccCCchhHHHHHHH-HHHHHCCeEEEec----
Confidence            4333333333333444455555544422 2 33667777774321000 0 001    2333 3456789999873    


Q ss_pred             CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          388 MKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       388 ~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                       .+.+|+.++  .+++++++++++|.+++++.-
T Consensus       438 -g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~  469 (472)
T PRK08742        438 -GDVLYWMPPYCVDEAQLALLADTTRHAIDEAV  469 (472)
T ss_pred             -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence             268999988  789999999999999998753

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.87  E-value=5.6e-19  Score=164.54  Aligned_cols=327  Identities=13%  Similarity=0.131  Sum_probs=209.3

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..|.+++|+..|.-.... ...+|.+.+++.+++++...  ..|. .....++.+.++++.        ..+.+++++++
T Consensus        21 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~~~-~~~~~~la~~l~~~~--------~~~~v~~~~SG   90 (364)
T PRK04013         21 SQGRRYLDLIAGIGVNVL-GHNHPEWVEEMSEQLEKLVVAGPMFE-HEEKEEMLEELSKWV--------NYEYVYMGNSG   90 (364)
T ss_pred             CCCCEEEEcccChhhccC-CCCCHHHHHHHHHHHHhcCCccCCcC-CHHHHHHHHHHHhhc--------CCCEEEEeCch
Confidence            358899999877533222 24678899999999987321  1122 222234555555543        23589999999


Q ss_pred             HHHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhcC--------ceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631          119 KQAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHTR--------LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI  188 (421)
Q Consensus       119 ~~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g--------~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~  188 (421)
                      ++|+..+++... ..| ++|+....+|++....+....        ..+....+.. -.+ .|++.+++.+.+++.++++
T Consensus        91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~~-~d~~~l~~~i~~~~aAviv  168 (364)
T PRK04013         91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IPF-NDVEAAKEAITKETAAVIF  168 (364)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ecC-CCHHHHHHHhcCCcEEEEE
Confidence            999999998763 345 899999999998754444321        1111000000 011 2678888888766776655


Q ss_pred             eCCCCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          189 VNPGNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       189 ~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      ...+...|.. .+++.++++.++|++||+++|.||+++++ +.|..+ ....++...+++   +++|.++ .|+++|.++
T Consensus       169 Epi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~gv~PDiv---~~gK~lg-gG~P~~a~~  242 (364)
T PRK04013        169 EPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYKVEPDIV---TMGKGIG-NGVPVSLTL  242 (364)
T ss_pred             cCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcCCCCCEE---Eeccccc-CCceeEEEE
Confidence            5556556664 56688999999999999999999999988 666533 223333333344   5689965 579999998


Q ss_pred             eeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631          268 TSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS  347 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~  347 (421)
                      .+.        ++ ..  .....+.+.++++.+++.+.|+...++.+.++.+.   .   + +.+.. +.+..+ . .-|
T Consensus       243 ~~~--------~~-~~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~---~---l-~~l~~-~~v~~v-R-G~G  301 (364)
T PRK04013        243 TNF--------DV-ER--GKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGE---K---F-IEIKG-ERVVTT-R-GRG  301 (364)
T ss_pred             ecc--------cc-cC--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHH---H---H-HHhcc-Ccceee-e-eCc
Confidence            853        12 11  11223567899999999998876443333222222   1   2 22222 333312 2 336


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      .+..+++..       ....+... +.++|+.+.+..    .+.+|+.++  .+++++++++++|.+++.+..
T Consensus       302 l~~gve~~~-------~~~~i~~~-~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~  362 (364)
T PRK04013        302 LMIGIVLKK-------PVGKYVEE-LQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL  362 (364)
T ss_pred             EEEEEEeCC-------cHHHHHHH-HHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence            777777752       13345544 567899997632    378999988  789999999999999998753

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.87  E-value=4.1e-19  Score=166.15  Aligned_cols=315  Identities=16%  Similarity=0.144  Sum_probs=211.8

Q ss_pred             CCcHHHHHHHHHHHhcCC--------CCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEE-cCCHHHHHHHHHHHh
Q 014631           61 RTTPVAADAVVDAVRSAE--------FDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYL-TAGCKQAIQVILTVL  129 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~--------~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~g~~~al~~~~~~l  129 (421)
                      +.|+.+++++.+.+.+..        .....+.  .-+.++++.+++++    +. .+..++++ +++|+.+++.++..+
T Consensus        13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~-~~~~~v~~~~gsgt~~~Ea~~~nl   87 (360)
T PRK05355         13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NI-PDNYKVLFLQGGASLQFAMVPMNL   87 (360)
T ss_pred             CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CC-CCCcEEEEEcCCchHHHHHHHHhc
Confidence            578999999998864310        1111111  12345555556555    32 12345555 577899999999999


Q ss_pred             cCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHh-hhccCceEEEEeCCCCCcccccCHHHHHH
Q 014631          130 ARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQK  206 (421)
Q Consensus       130 ~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~-~~~~~~~~i~~~~p~nptG~~~~~~~l~~  206 (421)
                      ..+|+++++...+..+.  ...++..|.. ..+..++..+. .+..++++ .++++++.|.+++..+.||+..+  ++.+
T Consensus        88 ~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~  163 (360)
T PRK05355         88 LGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPD  163 (360)
T ss_pred             CCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--cccc
Confidence            99999988887666553  6677888864 55554432332 34444444 67778899999999999999974  3555


Q ss_pred             HHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh
Q 014631          207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG  286 (421)
Q Consensus       207 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  286 (421)
                      |      +|+++|+|.+++.    |....++..++     +++.|.+|.+|.+|  +|++++++        ++.+++..
T Consensus       164 i------~g~l~vVDavss~----g~~~idv~~~d-----~~~~ssqK~lgP~G--lg~l~~s~--------~~l~~~~~  218 (360)
T PRK05355        164 T------GDVPLVADMSSDI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTIVIVRE--------DLLGRALP  218 (360)
T ss_pred             c------CCCcEEEEcCccc----cCccCCHHHcc-----EEEEeccccccCCc--eEEEEECH--------HHHhhccc
Confidence            4      7999999999987    44444444432     77889999998666  79998864        22222221


Q ss_pred             -------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEE
Q 014631          287 -------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFV  350 (421)
Q Consensus       287 -------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~  350 (421)
                                   .....++|+....+++.++|+...+. +++.+.++.+++.+++++.|++++.+.....+.  .+...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~  298 (360)
T PRK05355        219 SIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNV  298 (360)
T ss_pred             CCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEE
Confidence                         11224688888999999988865556 799999999999999999999985333121211  11234


Q ss_pred             EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      .+.++..     ....++... +.++|+.+.+|..  ..+.+|+|+.  ++.+|++++++.|++++.+.
T Consensus       299 sf~~~~~-----~~~~~~~~~-~~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~  359 (360)
T PRK05355        299 PFTLADE-----ELDKKFLAE-AKAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERRH  359 (360)
T ss_pred             EEEcCCh-----HHHHHHHHH-HHHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4444432     122344444 4667999876653  3478999997  78999999999999987653

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.86  E-value=1.1e-18  Score=168.07  Aligned_cols=345  Identities=13%  Similarity=0.053  Sum_probs=211.7

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYL---  114 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~---  114 (421)
                      .+-|+|--..      -...+.+.+++...+.+....+      |+....+.++++...+...+.++  ...+.+.+   
T Consensus        34 ~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~  105 (475)
T PLN03226         34 WKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQ  105 (475)
T ss_pred             HcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecC
Confidence            5566775443      2456889999988884321122      33333456777644444444443  33444433   


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCC---CCcchHH---HHhhcCceeE----eeeccCCCCccCCHHHHHhhhcc-Cc
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKP---GFPLYEA---NARHTRLEIR----HFDLLPEKGWEVDLDGLEALADE-NT  183 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p---~y~~~~~---~~~~~g~~~~----~~~~~~~~~~~~d~e~l~~~~~~-~~  183 (421)
                      .++|+.|+..++.+|++|||+|+..+.   +|.++..   ..+..+....    .+.+++ +++.+|++++++.+.. ++
T Consensus       106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~p  184 (475)
T PLN03226        106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRP  184 (475)
T ss_pred             cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCC
Confidence            367888999999999999999998553   3332211   1121222222    344443 3456899999998753 56


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCce
Q 014631          184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      +.|+ +..++ +|..   .++++|.++|+++|+++++|++|.......... .++.     .-.++++|+||+++  |.+
T Consensus       185 klIv-~~~S~-~s~~---~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-----~~Div~~t~hK~L~--GP~  252 (475)
T PLN03226        185 KLII-AGASA-YPRD---WDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-----YCDVVTTTTHKSLR--GPR  252 (475)
T ss_pred             eEEE-EecCc-CCCc---cCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-----CCeEEEecCccccc--CCC
Confidence            6554 43343 6666   457788899999999999999998755443322 1221     12277899999973  333


Q ss_pred             EEEEEeeCCCcch-------hHHHHHHHHhhhc--ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          263 LGWLVTSDPSGIL-------QELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       263 ~G~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .|++++++.. ..       ...++.+.+....  ...+++++...+++..+++......+++.+++..++.+++.+.|.
T Consensus       253 Gg~I~~~~~~-~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~  331 (475)
T PLN03226        253 GGMIFFRKGP-KPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLM  331 (475)
T ss_pred             ceEEEEchhh-cccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence            4888875321 00       0002222222221  123456666666666777654445567788999999999999998


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------CCHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------IEPSA  402 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------~~~e~  402 (421)
                      +. |+.++........+++.+.....    +..+ +...|++.||.+..+..++     .++.+|++..      .+++|
T Consensus       332 ~~-G~~l~~~~t~~hi~lv~~~~~gi----~~~~-~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d  405 (475)
T PLN03226        332 SK-GYKLVTGGTDNHLVLWDLRPLGL----TGSR-VEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKD  405 (475)
T ss_pred             hC-CCEEEcCCCCCCEEEEEccCCCC----CHHH-HHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHH
Confidence            85 88844322335566677743211    3443 4455688999998765332     2467898543      57899


Q ss_pred             HHHHHHHHHHHHHH
Q 014631          403 LEEGLGRIKAFCQR  416 (421)
Q Consensus       403 l~~~~~~l~~~~~~  416 (421)
                      ++++.+.|.++++.
T Consensus       406 ~~~ia~~i~~~~~~  419 (475)
T PLN03226        406 FEKVAEFLHRAVTI  419 (475)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999873

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.86  E-value=2.3e-18  Score=165.77  Aligned_cols=349  Identities=12%  Similarity=0.091  Sum_probs=209.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|+.++||. |.-.... ...+|.+.+++.+++++..   +....-..+.+..+++.+.+..+  ...+.++++++|++|
T Consensus        70 dG~~ylD~~-g~~~~~l-Gh~~p~v~~Ai~~ql~~~~---~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA  142 (459)
T PRK06082         70 DGKKYMDFH-GNNVHQL-GYGHPHVIEKVKEQMAKLP---FSPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSA  142 (459)
T ss_pred             CCCEEEEcc-cHhhccc-CCCCHHHHHHHHHHHHhCC---CccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHH
Confidence            478889986 4322122 2478999999999998632   11111123444555555554333  223689999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-Cce------------eEeeeccCCC--Ccc-C------CHHHHHh
Q 014631          122 IQVILTVLA--RPGANILLPKPGFPLYEANARHT-RLE------------IRHFDLLPEK--GWE-V------DLDGLEA  177 (421)
Q Consensus       122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~--~~~-~------d~e~l~~  177 (421)
                      +..+++...  ....+|+....+|++....+... |..            +..++.....  .+. .      +++.+++
T Consensus       143 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  222 (459)
T PRK06082        143 IGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEY  222 (459)
T ss_pred             HHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHH
Confidence            999987653  12368888899998875433322 211            1112211000  010 0      1345666


Q ss_pred             hhcc-CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccc
Q 014631          178 LADE-NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKR  255 (421)
Q Consensus       178 ~~~~-~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  255 (421)
                      .+.. +..+.++..| ++..+...+++.++++.++|++||+++|+||+++++.+.|..+ ....++...+++   +++|.
T Consensus       223 ~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f-a~e~~gv~PDiv---~~gKg  298 (459)
T PRK06082        223 VIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF-THQAYGIEPDIL---CIGKG  298 (459)
T ss_pred             HHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HhHhhCCCCCEE---Eeccc
Confidence            6642 2345566677 5444446777889999999999999999999999987777543 222233333333   47999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhh-hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKG-YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      ++.+.+++|.+++++        ++...... ....+.+.++++.+++.+.|+...++   +..++.+++.+++.+.|++
T Consensus       299 l~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~  367 (459)
T PRK06082        299 LGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLE  367 (459)
T ss_pred             ccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence            654336999999853        34433221 11235578889988888888753222   2344444555555555543


Q ss_pred             ----CCCccccCCCCceeEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHH
Q 014631          335 ----IPCITCPRKPEGSMFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEE  405 (421)
Q Consensus       335 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~  405 (421)
                          +|.+..+ . .-|.+..+++..........   ...++.. +.++||.+.+..    .+.+|++++  .+++++++
T Consensus       368 l~~~~~~i~~v-r-G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid~  440 (459)
T PRK06082        368 MKAKYPLIGDV-R-GIGLLWGVELVTDRHTKERAYDEAEAVLYR-CLNNGLSFKVSQ----GNVIQLSPPLIITREELTQ  440 (459)
T ss_pred             HHhhCCCeeee-e-eccceeEEEEccCccccCccHHHHHHHHHH-HHhCCCEEEecC----CCEEEEeCCCccCHHHHHH
Confidence                4333312 2 33566667774321000001   2234443 467899997732    478999987  69999999


Q ss_pred             HHHHHHHHHHHhhh
Q 014631          406 GLGRIKAFCQRHAK  419 (421)
Q Consensus       406 ~~~~l~~~~~~~~~  419 (421)
                      +++++.+++.++.+
T Consensus       441 ~~~~l~~~l~~~~~  454 (459)
T PRK06082        441 ALAILEEAIAKICQ  454 (459)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999987643

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.86  E-value=7.6e-19  Score=164.25  Aligned_cols=219  Identities=12%  Similarity=0.142  Sum_probs=160.8

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~  162 (421)
                      ....|++.+|++-        ..+..+++++|+.|++.++.+++++||+|++++..|.++...+    +..|.++..++.
T Consensus        63 t~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~  134 (395)
T PRK08114         63 THFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP  134 (395)
T ss_pred             hHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence            3578888888864        2457788888999999999999999999999999998876554    557888887753


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--CcEEEEcccccccccCCCCccccccc
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                             .|.+++++.+++++++|++.+|+||+|.+   .++++|+++|+++  |+++++|.+++...    . .....+
T Consensus       135 -------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v---~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~----~-~~pl~~  199 (395)
T PRK08114        135 -------LIGADIAKLIQPNTKVVFLESPGSITMEV---HDVPAIVAAVRSVNPDAVIMIDNTWAAGV----L-FKALDF  199 (395)
T ss_pred             -------CCHHHHHHhcCCCceEEEEECCCCCCCEe---ecHHHHHHHHHHhCCCCEEEEECCCcccc----c-cCHHHc
Confidence                   36789999999999999999999999999   5699999999998  49999999997622    1 122233


Q ss_pred             CCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      +.+   +++.|.+|.++.++ .-.|.++.+        +++.+.+..... .....++.....+...|+.     +.-+.
T Consensus       200 GaD---ivv~S~tKyl~Ghsdv~~G~v~~~--------~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-----L~lR~  263 (395)
T PRK08114        200 GID---ISIQAGTKYLVGHSDAMIGTAVAN--------ARCWEQLRENSYLMGQMVDADTAYMTSRGLRT-----LGVRL  263 (395)
T ss_pred             CCc---EEEEcCcccccCCCcceeEEEEcC--------HHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc-----HHHHH
Confidence            433   88999999877765 566766543        223343433222 2235556665554444443     56667


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ++..++...+.+.|+++|.+.-+..|
T Consensus       264 ~~~~~na~~va~~L~~hp~V~~V~yP  289 (395)
T PRK08114        264 RQHEESSLKVAEWLAEHPEVARVNHP  289 (395)
T ss_pred             HHHHHHHHHHHHHHHcCCCEeEEECC
Confidence            78889999999999988776533344

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.86  E-value=5.9e-19  Score=168.18  Aligned_cols=341  Identities=13%  Similarity=0.099  Sum_probs=210.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|...... -..+|.+.+++.+++++.....+...  ..+....+++.+.+..+  ...+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~~~~--~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse  111 (422)
T PRK05630         37 EDGSTVIDAMSSWWSAAH-GHGHPRLKAAAHKQIDTMSHVMFGGL--THEPAIKLTRKLLNLTD--NGLDHVFYSDSGSV  111 (422)
T ss_pred             CCCCEEEEcchhHHHhcC-CCCCHHHHHHHHHHHHhCCCcccCCc--CCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence            458999999887544322 35789999999999987322111111  12334445555544222  22368999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCCccC-C----HH
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKGWEV-D----LD  173 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-d----~e  173 (421)
                      |+..+++....       ++ .+|+....+|++....+... +.             ....+|.+....... +    .+
T Consensus       112 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  191 (422)
T PRK05630        112 SVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLR  191 (422)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHH
Confidence            99999886431       23 57999999999865444322 10             112222221110000 1    23


Q ss_pred             HHHhhhccCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          174 GLEALADENTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       174 ~l~~~~~~~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                      .+++.+.++. +.++..|  +...|.. .+.+.++++.++|++||+++|+||++.++.+.|..+ ....++...+++   
T Consensus       192 ~~~~~~~~~i-AAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDi~---  266 (422)
T PRK05630        192 SLELLIDETV-AAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPDIM---  266 (422)
T ss_pred             HHHHHHhhce-EEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh-HHHhcCCCCCee---
Confidence            4444454344 4456666  6667775 566889999999999999999999999887666533 222233222233   


Q ss_pred             ccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631          251 SMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR  322 (421)
Q Consensus       251 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  322 (421)
                      +++|.+ ..| ..+|+++++        +++.+.+...       ...+.+.++++.+++.++|+...+.   ...++.+
T Consensus       267 t~gK~l-~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~---~~~~~~~  334 (422)
T PRK05630        267 CVGKAL-TGGFMSFAATLCT--------DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETG---MWRKQVK  334 (422)
T ss_pred             eeechh-hcCccccceeecc--------HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhC---cHHHHHH
Confidence            789995 346 578999985        3566665421       1234578888998888888753322   2233455


Q ss_pred             HHHHHHHHHhhc---CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--
Q 014631          323 DTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--  397 (421)
Q Consensus       323 ~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--  397 (421)
                      ++.+++.+.|++   .|.+..+ . .-|++..+++...     .....+.. .+.++|+.+.+.     .+.+|+.++  
T Consensus       335 ~~g~~l~~~L~~l~~~~~v~~v-R-g~Gl~~~ie~~~~-----~~~~~~~~-~~~~~Gl~~~~~-----g~~l~~~PpL~  401 (422)
T PRK05630        335 RIEAELIAGLSPLAHLPGVADV-R-VLGAIGVVEMEQP-----VDMEEATQ-AAVDHGVWLRPF-----GRLVYVMPPYI  401 (422)
T ss_pred             HHHHHHHHHHHHhhcCCCeeee-e-ccccEEEEEECCc-----ccHHHHHH-HHHHCCeEEEec-----CCEEEEECCcc
Confidence            555555555543   3333312 2 2366777777532     12334444 457789999763     268899987  


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 014631          398 IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~~~  416 (421)
                      .+++++++++++|+++++.
T Consensus       402 it~~~i~~~~~~l~~al~~  420 (422)
T PRK05630        402 TTSEQIAQICAALAAAVKA  420 (422)
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            7899999999999999854

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.86  E-value=2.2e-19  Score=153.00  Aligned_cols=327  Identities=15%  Similarity=0.215  Sum_probs=213.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      -.+.+||-+...+     .+..++.++|.++.....  -|+......+|++.+|+++++       ...+|+++|++..+
T Consensus        20 ~~~~vDLRSDTvT-----~PTdeMr~am~eA~vgDd--VyGeD~tt~rLE~~vA~l~GK-------EAgLFv~SGTmgNl   85 (384)
T KOG1368|consen   20 THRSVDLRSDTVT-----VPTDEMRRAMAEASVGDD--VYGEDPTTNRLEQRVAELFGK-------EAGLFVPSGTMGNL   85 (384)
T ss_pred             eeecccccccccc-----CChHHHHHHHhhcccCcc--cccCCccHHHHHHHHHHHhCc-------cceeeecccccccH
Confidence            3566777766544     456788888888776654  466555578999999999853       44566666655555


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcc-hH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--------CceEEEEeCC
Q 014631          123 QVILTVLARPGANILLPKPGFPL-YE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--------NTVAMVIVNP  191 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--------~~~~i~~~~p  191 (421)
                      -.+...+-++|.+|++.+.+|.- |.  .+..+.|+.+..+  .++++.-++++++++.++.        -+++|.+.|-
T Consensus        86 laIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv--~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT  163 (384)
T KOG1368|consen   86 LAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTV--KNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENT  163 (384)
T ss_pred             HHHHHHhcCCCceEEeccchheeehhccChhhhccceeEee--eeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecc
Confidence            55555566799999999988853 32  2334455555554  4566777999999998862        3688888899


Q ss_pred             CCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccc--cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          192 GNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLT--FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       192 ~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      +|-+| .++|.+++.++.++|++||+.++.|.+-.+-.  -.|.   ++..+...-.-+.+ .+||.+|.|   +|-+++
T Consensus       164 ~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV---~vk~i~~~fDSVsi-CLSKglgAP---VGSViV  236 (384)
T KOG1368|consen  164 HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV---PVKKICSAFDSVSI-CLSKGLGAP---VGSVIV  236 (384)
T ss_pred             ccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC---CHHHHHHhhhhhhh-hhhccCCCC---cccEEE
Confidence            76565 99999999999999999999999998865422  1122   22222111111222 689997655   677766


Q ss_pred             eCCCcchhHHHHHHHHhhhccc-ccC--CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-
Q 014631          269 SDPSGILQELRIVDSIKGYLNI-SSG--PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-  344 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-  344 (421)
                      ..       ++++++.+.++.. .++  .+.+..+++..+|.+    .+. ..+.-.++...+.+.++..+++. +..| 
T Consensus       237 G~-------k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~----~~~-~L~~dHk~A~~lAe~~~~~~~i~-v~v~a  303 (384)
T KOG1368|consen  237 GS-------KDFIDKARHFRKALGGGMRQSGVLAAAALVALDE----NVP-LLRADHKRAKELAEYINTPEEIR-VEVPA  303 (384)
T ss_pred             cc-------HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc----chH-HHHHHHHHHHHHHHHhcccccee-eecch
Confidence            43       4566666555432 222  233444444444432    122 23344455666667777665576 3344 


Q ss_pred             CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      ...+++.+.+..+.+    +...++.. ++++||.+.+|..    ..+|+.+.  .++++++.++..+.+.+
T Consensus       304 ~etNiv~~~l~q~~~----~~~~l~~~-~~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k~~  366 (384)
T KOG1368|consen  304 VETNIVNMVLCQARL----TAEELCKF-LEKNGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSKKF  366 (384)
T ss_pred             hhcceeeeecccccC----CHHHHHHH-HHHCCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHHHH
Confidence            456677766654432    46666665 4889999998764    34899998  79999999999995443

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.86  E-value=1.8e-18  Score=166.02  Aligned_cols=349  Identities=17%  Similarity=0.158  Sum_probs=212.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.+++||..|.-.... ...+|.+.+++.+++++...  +....-..+....+++.+.+..+  ...+.++++++|++
T Consensus        46 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse  120 (445)
T PRK09221         46 ADGRKILDGTAGLWCCNA-GHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGSE  120 (445)
T ss_pred             CCCCEEEEccccHhhccC-CCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence            358899999887544332 35789999999999986211  11111112334445555544332  12368999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccC---CCCccC------
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLP---EKGWEV------  170 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~------  170 (421)
                      |+..+++....       ++ .+|+....+|++....+...+.             .+..+|.+.   ...+..      
T Consensus       121 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (445)
T PRK09221        121 SVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHG  200 (445)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHH
Confidence            99999876431       22 5799999999987544332211             111222110   000110      


Q ss_pred             --CHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          171 --DLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       171 --d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                        ..+++++.+.   .+..+.++..| +...|.. .+++.++++.++|++||+++|+||+++++.+.|..+ ....++..
T Consensus       201 ~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~gv~  279 (445)
T PRK09221        201 AELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFGVT  279 (445)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcCCC
Confidence              1346666553   13344556666 6667775 466789999999999999999999999887666543 22223322


Q ss_pred             CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHHH
Q 014631          244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      .++   .+++|.++.+.+++|.++++        +++++.+...        ...+.+.+++..+++.+.|+...++   
T Consensus       280 PDi---~~~gK~l~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~---  345 (445)
T PRK09221        280 PDI---ITFAKGLTNGAIPMGAVIAS--------DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE---  345 (445)
T ss_pred             CCE---EEeccccccCcccceeeEEc--------HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc---
Confidence            223   37889965433789998885        3566655321        1234567888888888888653222   


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeE
Q 014631          316 KIVDILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL  392 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~i  392 (421)
                      +..++.+++.+++++.|+++   |.+..+ . .-|.+..+++.............+... +.++||.+.++     .+.+
T Consensus       346 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-r-g~Gl~~~v~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~-----~~~l  417 (445)
T PRK09221        346 DLFERAAELAPYFEDAVHSLKGLPHVIDI-R-NIGLVAGIELAPRPGAPGARGYEAFMK-CFEKGLLVRYT-----GDTI  417 (445)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCCCEEEE-e-cCceEEEEEEecccccccchHHHHHHH-HHHCCeEEeec-----CCEE
Confidence            34556667777777777654   222211 1 224555556643211000112345544 46779999764     2579


Q ss_pred             EEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          393 RITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       393 Ri~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      |++++  .+++++++++++|++++.++
T Consensus       418 r~~Ppl~~t~~eid~~~~~l~~~l~~~  444 (445)
T PRK09221        418 ALSPPLIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             EEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            99977  79999999999999998764

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.86  E-value=2.7e-19  Score=168.46  Aligned_cols=306  Identities=21%  Similarity=0.278  Sum_probs=199.4

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCC
Q 014631           64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPG  142 (421)
Q Consensus        64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~  142 (421)
                      ++..+++.+.++.+.+..+++.  ..++++.+++|++        ...++.++++|.|+.+++.++ +++||+|+++..+
T Consensus         5 ~e~~~~v~~~l~s~~~~~~g~~--~~~fE~~~a~~~g--------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t   74 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLSTYGPY--VEEFEKEFAEYFG--------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT   74 (363)
T ss_dssp             HHHHHHHHHHHHHTCCSSSSHH--HHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred             HHHHHHHHHHHHhCCccCCCHH--HHHHHHHHHHHhC--------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence            4567788888887654443433  5899999999984        568999999999999999998 4799999999999


Q ss_pred             CcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcc
Q 014631          143 FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE  222 (421)
Q Consensus       143 y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  222 (421)
                      +.+....+...|++++.++++++ .+.+|++.+++.+.+++++|++++.   .|..   .++.+|.++|+++|++||+|.
T Consensus        75 ~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~  147 (363)
T PF01041_consen   75 FPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA  147 (363)
T ss_dssp             -THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred             chHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence            99999999999999999999754 5689999999999999999986554   5555   579999999999999999999


Q ss_pred             cccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc--------
Q 014631          223 VYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS--------  291 (421)
Q Consensus       223 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  291 (421)
                      +++.+. +.|.   .+..++    .+.+.||+  |.+  +.-..|++++++       +++.+++.......        
T Consensus       148 a~a~g~~~~g~---~~G~~g----d~~~fSf~~~K~i--~~geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~~  211 (363)
T PF01041_consen  148 AQAFGARYKGR---PVGSFG----DIAIFSFHPTKII--TTGEGGAVVTND-------PELAERARALRNHGRSRDAFRR  211 (363)
T ss_dssp             TTTTT-EETTE---ETTSSS----SEEEEESSTTSSS---SSS-EEEEEST-------HHHHHHHHHHTBTTEETSECST
T ss_pred             ccccCceeCCE---eccCCC----CceEecCCCCCCC--cCCCCeeEEecH-------HHHHHHhhhhhccCcCcccccc
Confidence            999854 2221   222222    26677775  764  333358888865       34556555433211        


Q ss_pred             ----------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-----eeEEEEecCc
Q 014631          292 ----------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-----SMFVMVKLNL  356 (421)
Q Consensus       292 ----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-----~~~~~~~~~~  356 (421)
                                ...+.+..+.+..-|     ..+++..++-+++.+.+.+.|.+++++..+..+.+     .+.+.+.++.
T Consensus       212 ~~~~~~~g~n~rm~~~~AAigl~QL-----~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~  286 (363)
T PF01041_consen  212 YRHELPPGYNFRMSELQAAIGLAQL-----KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPD  286 (363)
T ss_dssp             TEESSSS--B-B-BHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETC
T ss_pred             ccccccCCcccccHHHHHHHHHHHH-----HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccc
Confidence                      112323333333334     33667777777888899999999887642222222     1223344443


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCC-C-C------C----------------CCeEEEEec--CCHHHHHHHHHHH
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMA-V-G------M----------------KNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~-~------~----------------~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      ...    ...+-+.+.+++.||...+... . +      .                ...+.+-+.  .++++++.+++.|
T Consensus       287 ~~~----~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~i  362 (363)
T PF01041_consen  287 EAL----ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAI  362 (363)
T ss_dssp             CGC----STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHH
T ss_pred             ccc----chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhcc
Confidence            211    1234344455778999987652 1 1      0                123444443  5789999998887


Q ss_pred             H
Q 014631          411 K  411 (421)
Q Consensus       411 ~  411 (421)
                      +
T Consensus       363 r  363 (363)
T PF01041_consen  363 R  363 (363)
T ss_dssp             H
T ss_pred             C
Confidence            4

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK07046 aminotransferase; Validated

Probab=99.86  E-value=1.3e-18  Score=167.06  Aligned_cols=343  Identities=14%  Similarity=0.109  Sum_probs=206.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..+|||..|...... ...+|.+.+++.+++++.....+ +    .+.+..+++.+.+..+    .+.+.|+++|++|
T Consensus        73 DG~~yiD~~~g~g~~~l-Gh~~p~i~~Av~~q~~~~~~~~~-~----~~~~~~lAe~l~~~~~----~~~v~F~nSGtEA  142 (453)
T PRK07046         73 DGHRYDDFCLGDTGAMF-GHSPAPVARALAEQARRGLTTML-P----SEDAAWVGEELARRFG----LPYWQVATTATDA  142 (453)
T ss_pred             CCCEEEEeccccccccc-CCCCHHHHHHHHHHHHhCCCCCC-C----CHHHHHHHHHHHHHhC----CCEEEEECCHHHH
Confidence            37788898777533222 35789999999999987533222 2    2445555555554332    4789999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhh--cCceeEe------ee--ccC---CCCccCCHHHHHhhhccCceEE
Q 014631          122 IQVILTVLAR--PGANILLPKPGFPLYEANARH--TRLEIRH------FD--LLP---EKGWEVDLDGLEALADENTVAM  186 (421)
Q Consensus       122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~--~g~~~~~------~~--~~~---~~~~~~d~e~l~~~~~~~~~~i  186 (421)
                      +..+++....  ..++|+....+|+++...+..  .+.....      ++  ...   .-.|+ |++.+++.+..+..+.
T Consensus       143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~~~vAa  221 (453)
T PRK07046        143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-DLAALEAALADGDVAA  221 (453)
T ss_pred             HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-CHHHHHHHhCCCCeEE
Confidence            9999886531  236888899999997432211  1100000      00  000   00111 7888988885444556


Q ss_pred             EEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631          187 VIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG  264 (421)
Q Consensus       187 ~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  264 (421)
                      ++..| +...|.+ .+++.++++.++|++||+++|+||+++ +..+-........+.+  +++   +++|.+ ..|+++|
T Consensus       222 vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~P--Di~---t~gK~l-ggG~Pi~  294 (453)
T PRK07046        222 VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEP--DFL---VVGKPI-AGGVPCA  294 (453)
T ss_pred             EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCc--cce---eehhhh-cCCCcce
Confidence            67777 4445654 556789999999999999999999997 3221111222222222  233   688996 4689999


Q ss_pred             EEEeeCCCcchhHHHHHHHHhhh----------cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhh
Q 014631          265 WLVTSDPSGILQELRIVDSIKGY----------LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .++++        .++++.+...          ...+.+.++++.+++.+.|+... ++.+++..+.-...++.+.+.+.
T Consensus       295 av~g~--------~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~  366 (453)
T PRK07046        295 VYGFS--------AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIA  366 (453)
T ss_pred             eeeeh--------HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            99985        4677766421          12245778899998888887532 23344444444444444444444


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccC------CCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEG------ISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALE  404 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~  404 (421)
                      +. ++.......+. .+.+.+.......      ..+   ...+... +.++||.+.|.     .+.+++++.+++++|+
T Consensus       367 ~~-~~~~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~-----~~~~~~~p~~t~~did  438 (453)
T PRK07046        367 RH-GLPWHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLY-LLNRGVLITPF-----HNMMLVCPATTAADVD  438 (453)
T ss_pred             hC-CCCeEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHH-HHHCCCEEecc-----cCcEEEeCCCCHHHHH
Confidence            44 32211122223 3334442211000      001   1233333 45679999863     2467888889999999


Q ss_pred             HHHHHHHHHHHHhh
Q 014631          405 EGLGRIKAFCQRHA  418 (421)
Q Consensus       405 ~~~~~l~~~~~~~~  418 (421)
                      ++++++.++++++.
T Consensus       439 ~~~~~~~~~l~~~~  452 (453)
T PRK07046        439 RLVAAFDACLGELL  452 (453)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998764

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.86  E-value=1.1e-18  Score=166.62  Aligned_cols=345  Identities=13%  Similarity=0.121  Sum_probs=212.7

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|.-.... ...+|.+.+++.+++++.......  .-..+.+..+++.+....+  ...+.++++++|++
T Consensus        41 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse  115 (429)
T PRK06173         41 KDGRRLIDGMSSWWAALH-GYNHPRLNAAATNQLAKMSHIMFG--GFTHEPAVELAQKLLEILP--PSLNKIFFADSGSV  115 (429)
T ss_pred             CCCCEEEEccchHHhccC-CCCCHHHHHHHHHHHHhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCchH
Confidence            358899999877433222 246799999999999873211110  0012333444444443222  23468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCC---Cc-cCCHHH
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEK---GW-EVDLDG  174 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~---~~-~~d~e~  174 (421)
                      |+..+++....       +| .+|+....+|++....+... +.             .+..+|.+...   .+ .-+++.
T Consensus       116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~  195 (429)
T PRK06173        116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEP  195 (429)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHH
Confidence            99999876531       33 57889999999854333221 10             01112211000   00 013556


Q ss_pred             HHhhhc--cCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          175 LEALAD--ENTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       175 l~~~~~--~~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      +++.+.  .+..+.++..|  +...|.. .|++.++++.++|++||+++|+||++.++...|..+. ...++...+++  
T Consensus       196 l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~PDiv--  272 (429)
T PRK06173        196 LQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFA-LEHAGVVPDIM--  272 (429)
T ss_pred             HHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchH-HHhcCCCCCEE--
Confidence            666664  23345566676  6666766 6788899999999999999999999988766665431 12223222233  


Q ss_pred             cccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-----c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631          250 GSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-----L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR  322 (421)
Q Consensus       250 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  322 (421)
                       +|+|.++ .| +.++.++++        +++.+.+...     . ..+.+.+++.++++.++|+...+.   +..++.+
T Consensus       273 -~~gK~l~-gG~~p~~a~~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~~~~~  339 (429)
T PRK06173        273 -CIGKALT-GGYLTLSATITT--------EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQQNIQ  339 (429)
T ss_pred             -Eeehhhh-CCccccceEEec--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHH
Confidence             4899974 66 478888875        3566666421     1 123457888888888888753222   2345556


Q ss_pred             HHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--
Q 014631          323 DTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--  397 (421)
Q Consensus       323 ~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--  397 (421)
                      ++.+++.+.|+++   |.+..+  -..|++..+.+....     ....+... +.++||.+.+..     +.+|+.++  
T Consensus       340 ~~g~~l~~~L~~~~~~~~v~~v--Rg~Gl~~~iel~~~~-----~~~~i~~~-l~e~Gi~v~~~g-----~~l~~~Ppl~  406 (429)
T PRK06173        340 RIEAQLKQELAPAAEFDSVAEV--RVLGAIGVVEMKEPV-----NMATLQPR-FVEHGIWVRPFG-----KLVYIMPPFI  406 (429)
T ss_pred             HHHHHHHHHHHHhhcCCCeeee--eccceEEEEEeCCcc-----cHHHHHHH-HHHCCeEEEecC-----CEEEEeCCcc
Confidence            6666666666543   322211  123666667775321     23445544 567899998742     58999988  


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhh
Q 014631          398 IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .+++++++++++|.+++.+..+
T Consensus       407 it~~ei~~~~~~l~~~l~~~~~  428 (429)
T PRK06173        407 ISPDELSQLTSGLLRVLKQEYN  428 (429)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Confidence            7899999999999999987643

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.86  E-value=5.1e-19  Score=156.46  Aligned_cols=323  Identities=18%  Similarity=0.194  Sum_probs=227.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc
Q 014631           57 FPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA  130 (421)
Q Consensus        57 ~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~  130 (421)
                      +.+...+|.+.+|+++.+++.....      -+...-.-+|++.+|++.++       +..++|+ +.--|+...+.+|.
T Consensus       181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK-------~aALlFs-SCfVANDstLftLa  252 (570)
T KOG1360|consen  181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQK-------EAALLFS-SCFVANDSTLFTLA  252 (570)
T ss_pred             cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcC-------cceeeee-eeeeccchHHHHHH
Confidence            4556789999999999998742110      11222356999999999743       3344443 44444444444442


Q ss_pred             --CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---c-CceEEEEeCCCCCcccccCHHHH
Q 014631          131 --RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---E-NTVAMVIVNPGNPCGNVFTYQQL  204 (421)
Q Consensus       131 --~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~-~~~~i~~~~p~nptG~~~~~~~l  204 (421)
                        -||-.|..+...|.+.....+..+.+-..+.++       |++.|++++.   + -+|+|.+...+..+|.+.   ++
T Consensus       253 k~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHN-------D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc---pl  322 (570)
T KOG1360|consen  253 KKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHN-------DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC---PL  322 (570)
T ss_pred             HHCCCcEEeccccchHHHHHHhhhcCCcceeeccC-------CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC---CH
Confidence              388899999999999888888888765555543       6777777663   2 467888999999999994   58


Q ss_pred             HHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++|++++++||.+.++||+|....|+..+. .+..-+.  +...|+-+++.|+||.-|   ||+...        ..+++
T Consensus       323 eelcDvah~yGAiTFlDEVHAVGlYG~rGa-GvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat--------~~LvD  390 (570)
T KOG1360|consen  323 EELCDVAHKYGAITFLDEVHAVGLYGPRGA-GVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT--------RKLVD  390 (570)
T ss_pred             HHHHHHHHHhCceeeeehhhhhccccCCCC-CccccCCcchhhhhcccchhhhccccc---ceehhh--------hhHHH
Confidence            889999999999999999998877664332 1111111  122377899999999888   999885        35777


Q ss_pred             HHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          283 SIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       283 ~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      .++.+..   ++.+.++.....+.++++......-...++..+++..++++.|.+. |+.+  .|..+..+-+++.+.. 
T Consensus       391 miRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPV--i~~pSHIiPv~vgda~-  466 (570)
T KOG1360|consen  391 MIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPV--IPNPSHIIPVRVGDAA-  466 (570)
T ss_pred             HHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcc--cCCCcceeeeeccCHH-
Confidence            7766643   2344555666666666554222323455667778888999999987 8873  3555566666665432 


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                          ...+..+.|+.++||+|....+...   ...+||.+.  ++++.++.+++.+..++.+.
T Consensus       467 ----l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v  525 (570)
T KOG1360|consen  467 ----LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV  525 (570)
T ss_pred             ----HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence                2556778899999999998877654   457999886  89999999999999988775

>PRK07483 hypothetical protein; Provisional

Probab=99.86  E-value=2.8e-18  Score=164.56  Aligned_cols=358  Identities=16%  Similarity=0.161  Sum_probs=214.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|.-.... -..+|.+.+++.+++++.....  ......+....+++.+.+..+  ...+.++++++|++
T Consensus        27 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE  101 (443)
T PRK07483         27 ATGKRYLDASGGAAVSCL-GHSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSE  101 (443)
T ss_pred             CCCCEEEEcCccHhhhcc-CCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHH
Confidence            358899999887544322 3578899999999998742111  110112444555555544322  22368999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCc---cC------
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGW---EV------  170 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~---~~------  170 (421)
                      |+..+++....       +| .+|+....+|++....+...+..             +..++.....+.   ..      
T Consensus       102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (443)
T PRK07483        102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYG  181 (443)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHH
Confidence            99999886431       34 57889899999875444332110             111211100000   00      


Q ss_pred             --CHHHHHhhhc---cCceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          171 --DLDGLEALAD---ENTVAMVIVNP-GN-PCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       171 --d~e~l~~~~~---~~~~~i~~~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                        .++++++.+.   .+..+.++..| +. ..|. ..+++.++++.++|++||+++|.||+++++.+.|..+ ....++.
T Consensus       182 ~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv  260 (443)
T PRK07483        182 QRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDGV  260 (443)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcCC
Confidence              0245665442   23344566677 43 2465 4677889999999999999999999999987777533 2223333


Q ss_pred             CCCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhh-----cccccCCchHHHHHHHHHhhccch-hHHH
Q 014631          243 TVPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGY-----LNISSGPATFVQGAVPQIFKNTKE-DFFS  315 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~-~~~~  315 (421)
                      ..+++   +++|.+ ..|+ ++|.++++        +++.+.+...     ...+.+.++++.+++.+.|+...+ ...+
T Consensus       261 ~PDiv---~~gK~l-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~  328 (443)
T PRK07483        261 APDLV---TIAKGL-GAGYQPIGAVLAS--------DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLA  328 (443)
T ss_pred             CCCee---eehhhh-ccCccccEEEEEc--------HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence            33334   568995 5675 99999985        3566666432     123557889999999888875333 2333


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc-C-CC---C-hHHHHHHHHhhcCeeEEeCCCC--C
Q 014631          316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE-G-IS---D-DMEFALQLAKEESVIVLPGMAV--G  387 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~---~-~~~~~~~ll~~~gv~v~~g~~~--~  387 (421)
                      +.++.-...++.+.+.+++.|.+..+ . .-|++..+++...... . ..   . ...+.. .+.++||++.+....  +
T Consensus       329 ~~~~~g~~l~~~L~~l~~~~~~i~~v-R-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gll~~~~~~~~~~  405 (443)
T PRK07483        329 NVRARGEQLRARLRERLGQHPHVGDI-R-GRGLFVGVELVADRATKAPFDPALKLHARIKR-EAMARGLMVYPMGGTIDG  405 (443)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeeeE-e-ecccEEEEEEeecccccCCCCchhhHHHHHHH-HHHHCCcEEEecCccccC
Confidence            33333333344444444445433312 2 3356666666432100 0 00   0 123444 456789999874211  1


Q ss_pred             C-CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          388 M-KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       388 ~-~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      . ++.+|+.++  .+++++++++++|.+++.+..+
T Consensus       406 ~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~  440 (443)
T PRK07483        406 VRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA  440 (443)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            1 468999987  7999999999999999987654

>PRK12403 putative aminotransferase; Provisional

Probab=99.86  E-value=2.6e-18  Score=165.59  Aligned_cols=352  Identities=14%  Similarity=0.138  Sum_probs=206.6

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CC-C-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CY-S-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y-~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      ..|.+++||..|.-....+ ..+|.+.+++.+++++.... .+ . ......++.+.+++++    +  ...+.++++++
T Consensus        51 ~dG~~ylD~~~g~~~~~lG-h~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~----p--~~~~~v~f~~S  123 (460)
T PRK12403         51 NDGKRYLDGMSGLWCTNLG-YGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLL----P--GHYSHAIYTNS  123 (460)
T ss_pred             CCCCEEEECchhHHhhcCC-CCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhC----C--CCcCEEEEeCC
Confidence            3488999998775333333 47899999999999873211 11 1 1111234455555443    2  22368999999


Q ss_pred             HHHHHHHHHHHhc-------CCCC-eEEEcCCCCcchHHHHhhc-Cce-----------eEeeeccCC--CCccC-----
Q 014631          118 CKQAIQVILTVLA-------RPGA-NILLPKPGFPLYEANARHT-RLE-----------IRHFDLLPE--KGWEV-----  170 (421)
Q Consensus       118 ~~~al~~~~~~l~-------~~gd-~Vl~~~p~y~~~~~~~~~~-g~~-----------~~~~~~~~~--~~~~~-----  170 (421)
                      |++|+..+++...       ++++ .|+....+|++....+... |.+           +..+|.+..  .++..     
T Consensus       124 GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  203 (460)
T PRK12403        124 GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEF  203 (460)
T ss_pred             cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence            9999999998764       2333 4555677888874433322 211           111211100  00011     


Q ss_pred             ---CHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          171 ---DLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       171 ---d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                         +.+++++.+.   ++..+.++..| +...|.+ .+++.+++|.++|++||+++|+||+++++.+.|..+. ...++.
T Consensus       204 ~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~gv  282 (460)
T PRK12403        204 GRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFGF  282 (460)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcCC
Confidence               1344555442   23344566666 5556765 5678899999999999999999999999877776432 222333


Q ss_pred             CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-----cccccCCchHHHHHHHHHhhccchh-HHH
Q 014631          243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-----LNISSGPATFVQGAVPQIFKNTKED-FFS  315 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~-~~~  315 (421)
                      ..+++   +++|.+ ..| .++|.++++        +++++.+...     ...+.+.++++++++.++|+...++ ..+
T Consensus       283 ~PDiv---~~gK~l-ggG~~Piga~v~~--------~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~  350 (460)
T PRK12403        283 EPDTL---SIAKGL-TSGYVPMGGLVLS--------KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVT  350 (460)
T ss_pred             CCCeE---EEcccc-cccccceEEEEEC--------HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence            32333   488996 456 489998885        3566665421     1234568899999998888753322 223


Q ss_pred             HHH-HHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc-CC-CCh---HHHHHHHHhhcCeeEEeCCCCCCC
Q 014631          316 KIV-DILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE-GI-SDD---MEFALQLAKEESVIVLPGMAVGMK  389 (421)
Q Consensus       316 ~~~-~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~---~~~~~~ll~~~gv~v~~g~~~~~~  389 (421)
                      +.. +.-...++.+.+...+.|.+..+ . ..|.+..+++...... .. ...   ...+...+.++|+.+.+..     
T Consensus       351 ~~~~~~g~~l~~~L~~l~~~~~~i~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----  423 (460)
T PRK12403        351 RVKDDTGPYLQRCLREVFGDHPLVGEV-Q-GAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-----  423 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEeE-e-ecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-----
Confidence            332 22333333344333445433312 2 3356666777432100 00 000   1112233467899997531     


Q ss_pred             CeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          390 NWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       390 ~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +.+|++++  .++++++++++.|.++++++.+
T Consensus       424 ~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~  455 (460)
T PRK12403        424 GRMIMAPALVAGRAEIDELVDKTRIAVDRTAR  455 (460)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            45899988  5999999999999999988753

>PLN02880 tyrosine decarboxylase

Probab=99.85  E-value=2.5e-18  Score=166.35  Aligned_cols=341  Identities=9%  Similarity=0.032  Sum_probs=216.8

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEcCCHHHHHHHHHHHhcC-------
Q 014631           64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-----PDDVYLTAGCKQAIQVILTVLAR-------  131 (421)
Q Consensus        64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~-------  131 (421)
                      ..+.+.+...++. ....|...++..++++.+.+|+.+.+|.+-.     ...-++|+|||+++..++.+..+       
T Consensus        97 ~~lad~l~~~~n~-~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g  175 (490)
T PLN02880         97 GFLGEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVG  175 (490)
T ss_pred             HHHHHHHHHhhcc-CCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhc
Confidence            4444445544433 2234545556789999999999998886532     12467889989887666544321       


Q ss_pred             ----CCCeEEEcCCCCcchHHHHhhcCce---eEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeCCCCCcccc
Q 014631          132 ----PGANILLPKPGFPLYEANARHTRLE---IRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVNPGNPCGNV  198 (421)
Q Consensus       132 ----~gd~Vl~~~p~y~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~p~nptG~~  198 (421)
                          +.-.|++++.+|+++..++...|..   ++.+|.+.++++.+|+++|++.+.+.      +.+|+-+..+..||.+
T Consensus       176 ~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai  255 (490)
T PLN02880        176 KNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV  255 (490)
T ss_pred             ccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc
Confidence                1124667888999999999999985   67888765556789999999988532      3445556668889999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                         +++++|+++|++||+++++|.+|+++...-... ..+..+..-  .-+..++||++ .....+|++++++..     
T Consensus       256 ---Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~a--DSit~d~HKwl-~~P~~~g~llvr~~~-----  324 (490)
T PLN02880        256 ---DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEA--DSFNMNAHKWF-LTNFDCSLLWVKDRN-----  324 (490)
T ss_pred             ---CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhc--CEEEECchhhc-CCCccEEEEEEeCHH-----
Confidence               779999999999999999999999864321111 112222111  14566899995 666789999997532     


Q ss_pred             HHHHHHHhhhccc--------cc----------CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          278 LRIVDSIKGYLNI--------SS----------GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       278 ~~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                       .+.+.+.....+        ..          ....+....+...|+....+.+.++.++..++++++.+.+++.|+++
T Consensus       325 -~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~e  403 (490)
T PLN02880        325 -ALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFE  403 (490)
T ss_pred             -HHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence             222222111100        00          00011122222334444456777777777799999999999988998


Q ss_pred             ccCCCCceeEEEEecCcccccCC-CC--hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Q 014631          340 CPRKPEGSMFVMVKLNLSLLEGI-SD--DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAF  413 (421)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~  413 (421)
                      ++..|..+ .+.++++....... .+  ...+.+++.++..+.+.+ ..+....++|+++.   +++++++.+++.|.+.
T Consensus       404 l~~~~~~~-iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~  481 (490)
T PLN02880        404 VVTPRIFS-LVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDE  481 (490)
T ss_pred             EecCCceE-EEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            66444533 44555542110000 00  124555554445555544 44444678999997   4579999999999998


Q ss_pred             HHHhhh
Q 014631          414 CQRHAK  419 (421)
Q Consensus       414 ~~~~~~  419 (421)
                      .+++..
T Consensus       482 ~~~~~~  487 (490)
T PLN02880        482 ASKLLG  487 (490)
T ss_pred             HHHHHH
Confidence            877643

>PLN02590 probable tyrosine decarboxylase

Probab=99.85  E-value=3.1e-18  Score=165.65  Aligned_cols=341  Identities=12%  Similarity=0.070  Sum_probs=220.8

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEcCCHHHHHHHHHHHhcC-------
Q 014631           64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-----PDDVYLTAGCKQAIQVILTVLAR-------  131 (421)
Q Consensus        64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~-------  131 (421)
                      ..+.+.+...+.. ....|...++..++++.+.+|+.+.+|.+..     ...-++++|+++|+..++.+..+       
T Consensus       145 ~~lgd~l~sa~n~-~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g  223 (539)
T PLN02590        145 GFLGEMLNAGLSV-VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVG  223 (539)
T ss_pred             HHHHHHHHHhccc-ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhc
Confidence            4444555555543 2345656667889999999999999886532     13457788999887766544221       


Q ss_pred             ----CCCeEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeCCCCCcccc
Q 014631          132 ----PGANILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVNPGNPCGNV  198 (421)
Q Consensus       132 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~p~nptG~~  198 (421)
                          +.-.|.+++.+|+++..++...|+   +++.+|++..+++.+|+++|++.+.+.      +-+|+-+..+..||.+
T Consensus       224 ~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai  303 (539)
T PLN02590        224 KTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV  303 (539)
T ss_pred             ccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc
Confidence                112556678899999999999998   478888765456789999999988542      3345556667889999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                         +++++|.++|++||+++++|.+|+++..--... ..+..++.-+  =+..++||+ +.....+|.++++++..    
T Consensus       304 ---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~AD--Sit~D~HK~-l~~p~~cg~llvr~~~~----  373 (539)
T PLN02590        304 ---DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENAD--SFNMNAHKW-LFANQTCSPLWVKDRYS----  373 (539)
T ss_pred             ---CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCC--EEEECchhh-cCcCcCEEEEEecCHHH----
Confidence               899999999999999999999999866322111 1122222111  223479999 46667899999976431    


Q ss_pred             HHHHHHHhhh-----------------ccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          278 LRIVDSIKGY-----------------LNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       278 ~~~~~~~~~~-----------------~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                        +.+.+...                 ... ....-.+....+...|+....+.+.++.++..++.+++.+.+++.|+++
T Consensus       374 --l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fe  451 (539)
T PLN02590        374 --LIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFE  451 (539)
T ss_pred             --HHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence              22222110                 000 0011112333344455554568889999999999999999999999999


Q ss_pred             ccCCCCceeEEEEecCcccccCC---CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Q 014631          340 CPRKPEGSMFVMVKLNLSLLEGI---SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAF  413 (421)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~  413 (421)
                      ++..|.-+ .+.+++........   .-...+.+++.+ .|.............++|+++.   +++++++.+++.|.+.
T Consensus       452 l~~~~~l~-iVcFr~~~~~~~~~~~~~ln~~l~~~l~~-~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~  529 (539)
T PLN02590        452 VVTTRYFS-LVCFRLAPVDGDEDQCNERNRELLAAVNS-TGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH  529 (539)
T ss_pred             EecCCceE-EEEEEecCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            66445433 34444432110000   002344555433 4555544444444568999997   5789999999999998


Q ss_pred             HHHhhh
Q 014631          414 CQRHAK  419 (421)
Q Consensus       414 ~~~~~~  419 (421)
                      ..++.+
T Consensus       530 a~~~~~  535 (539)
T PLN02590        530 ASKFTR  535 (539)
T ss_pred             HHHhcc
Confidence            877643

>PRK07481 hypothetical protein; Provisional

Probab=99.85  E-value=5.4e-18  Score=163.07  Aligned_cols=351  Identities=13%  Similarity=0.119  Sum_probs=209.4

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|.-.... ...+|.+.+++.+++.+....... .....+.+..+++.+....+ +...+.++++++|++
T Consensus        39 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsE  115 (449)
T PRK07481         39 IDGKKLLDGVGGLWNVNV-GHNREEVKEAIVRQLDELEYYSTF-DGTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSD  115 (449)
T ss_pred             CCCCEEEECchhHHhhcC-CCCCHHHHHHHHHHHHhccceecc-cccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHH
Confidence            458899999877543322 357789999999999873211100 00112444555555544332 112468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCC--CCcc-CCHHHH-
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPE--KGWE-VDLDGL-  175 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~-~d~e~l-  175 (421)
                      |+..+++....       +| .+|+....+|+++...+...+.             .+..++.+..  ..+. -|.+.+ 
T Consensus       116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~  195 (449)
T PRK07481        116 SVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELA  195 (449)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHH
Confidence            99999886431       34 5799999999997654433221             1111211100  0011 133333 


Q ss_pred             -------Hhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          176 -------EALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       176 -------~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                             ++.+.   ++..+.++..| +...|.. .+++.++++.++|++||+++|.||+++++.+.|..+. ...++..
T Consensus       196 ~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~  274 (449)
T PRK07481        196 RICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGWGVK  274 (449)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhcCCC
Confidence                   33332   23345566666 5556765 5778899999999999999999999999877765332 2233333


Q ss_pred             CCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHH
Q 014631          244 VPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFF  314 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~  314 (421)
                      .+++   +++|.+ ..| +++|.++++        +++++.+...        ...+.+.++++.+++.++|+...+.. 
T Consensus       275 PDiv---~~gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~-  341 (449)
T PRK07481        275 PDIM---CLAKGI-TSGYVPLGATMVN--------ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVRED-  341 (449)
T ss_pred             CCEE---EEeecc-cCCCcCceEEEEc--------HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhh-
Confidence            3344   568995 456 589999985        3566666431        12345678999999888887533222 


Q ss_pred             HHHHHHHHHHHHHHHHHhh----cCCCccccCCCCceeEEEEecCcccc-cCCC----C-hHHHHHHHHhhcCeeEEeCC
Q 014631          315 SKIVDILRDTADICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLL-EGIS----D-DMEFALQLAKEESVIVLPGM  384 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~----~-~~~~~~~ll~~~gv~v~~g~  384 (421)
                        ..++.+++.+++.+.|+    ++|-+..+ . .-|.+..+++..... ....    . ...+.. .+.++||.+.+..
T Consensus       342 --l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-r-G~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gvl~~~~g  416 (449)
T PRK07481        342 --LPANAAKRGAYLLEGLQPLKERFELVGDV-R-GKGLMLALDLVADKATREPIDPSKGYANAVAD-VARENGVLVRPSG  416 (449)
T ss_pred             --HHHHHHHHHHHHHHHHHHHhhcCCCeEEE-e-ecceEEEEEecccccccCCCCchhHHHHHHHH-HHHhCCeEEEecC
Confidence              22333333444444443    34323212 2 235666677642110 0000    1 123333 4567899998742


Q ss_pred             CCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          385 AVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       385 ~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                           ..+|++++  .+++++++++++|.++++++.
T Consensus       417 -----~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~  447 (449)
T PRK07481        417 -----TKIILSPPLVIQREDVDRIVDALDAGLSAVP  447 (449)
T ss_pred             -----CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence                 35899977  699999999999999998753

>PRK06917 hypothetical protein; Provisional

Probab=99.85  E-value=7e-18  Score=162.07  Aligned_cols=355  Identities=14%  Similarity=0.125  Sum_probs=213.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.+++||..|.-.... -..+|.+.+++.+++++... .+.. .-..+.+..+++.+....+  ...+.++++++|++
T Consensus        28 ~dG~~ylD~~~g~~~~~l-Gh~hp~v~~Ai~~ql~~~~~-~~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE  102 (447)
T PRK06917         28 QNGNKYFDGSSGAVTAGI-GHGVKEIADAIKEQAEEVSF-VYRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSE  102 (447)
T ss_pred             CCCCEEEECchhHHhccC-CCCCHHHHHHHHHHHhhCcC-cccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHH
Confidence            358899999877533222 25689999999999987421 1111 0112444555555554332  22358999999999


Q ss_pred             HHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--ccC-------
Q 014631          121 AIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WEV-------  170 (421)
Q Consensus       121 al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~~-------  170 (421)
                      |+..+++...       .+| .+|+....+|+++...+.....             .+..++.+....  ++-       
T Consensus       103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  182 (447)
T PRK06917        103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL  182 (447)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence            9999998762       133 6799999999988655433211             011111111000  000       


Q ss_pred             -CHHHHHhhhcc---CceEEEEeCC-CC-Ccccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          171 -DLDGLEALADE---NTVAMVIVNP-GN-PCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       171 -d~e~l~~~~~~---~~~~i~~~~p-~n-ptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                       +.+.+++.+..   +..+.++..| +. ..|.. .|++.++++.++|++||+++|+||+++++.+.|..+. ...++..
T Consensus       183 ~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a-~~~~gv~  261 (447)
T PRK06917        183 ACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFA-MEHWGVE  261 (447)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhh-HHhcCCC
Confidence             23455666542   2345566777 43 34554 5788899999999999999999999998876665432 2223322


Q ss_pred             CCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhhc-----ccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          244 VPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGYL-----NISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      .+++   +++|.+ ..|. ++|.++++        +++++.+....     ..+.+.+++..+++.+.|+...+.   +.
T Consensus       262 PDi~---~~gK~l-~~G~~Pi~a~~~~--------~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~---~l  326 (447)
T PRK06917        262 PDIM---TLGKGL-GAGYTPIAATVVS--------DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKH---NL  326 (447)
T ss_pred             CCEE---Eeeehh-ccCCcceEEEEEc--------HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHC---CH
Confidence            2333   678995 4675 89999985        35666664321     124567889999988888753322   22


Q ss_pred             HHHHHHHHHHHHHHhh----cCCCccccCCCCceeEEEEecCcccc--cCCCC----hHHHHHHHHhhcCeeEEeCCC-C
Q 014631          318 VDILRDTADICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLL--EGISD----DMEFALQLAKEESVIVLPGMA-V  386 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v~~g~~-~  386 (421)
                      .++.+++.+++.+.|+    +.|.+..+ . .-|.++.+++.....  .....    ...++.. +.++||.+.+... .
T Consensus       327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~v-r-G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~~~  403 (447)
T PRK06917        327 PEKAAEKGEYLIKGLQKVQQQSTIIGDV-R-GKGLLIGVEFVADKKTKQPFSKSQAVASELISV-AAKNGLLLYPAVAGQ  403 (447)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCEEEE-e-ecceEEEEEEeccCCcCCCCcchhHHHHHHHHH-HHhCCcEEEeccccc
Confidence            3334444444444443    34333212 2 235566666632110  00001    2234444 5678999987521 1


Q ss_pred             -C-CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          387 -G-MKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       387 -~-~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       + ..+.+|++++  .+++++++++++|.++++++.+
T Consensus       404 ~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~  440 (447)
T PRK06917        404 DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ  440 (447)
T ss_pred             CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence             1 1468999987  8999999999999999987643

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.85  E-value=3e-18  Score=159.94  Aligned_cols=281  Identities=18%  Similarity=0.236  Sum_probs=185.4

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~  163 (421)
                      ...+++.++++-+        .+.++++++|+.|+..++.+++++||+|++....|.+....++    ..|.++.+++. 
T Consensus        57 ~~~le~~la~Le~--------g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-  127 (386)
T PF01053_consen   57 VRALEQRLAALEG--------GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-  127 (386)
T ss_dssp             HHHHHHHHHHHHT---------SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred             HHHHHHHHHHhhc--------ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence            4688888888762        3678999999999999999999999999999999998765554    46888777642 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC-cEEEEcccccccccCCCCcccccccCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG-IMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                            -|++++++++++++++|++..|.||+..+   .++++|+++|+++| +++++|..++...    .+.++ .++.
T Consensus       128 ------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~----~~~pL-~~Ga  193 (386)
T PF01053_consen  128 ------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPY----NQNPL-ELGA  193 (386)
T ss_dssp             ------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTT----TC-GG-GGT-
T ss_pred             ------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeecccccee----eeccC-cCCc
Confidence                  38899999999999999999999999888   77999999999998 9999999997632    11222 2333


Q ss_pred             CCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDI  320 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  320 (421)
                      +   +++.|.+|.++..+-- .|.+++++.      .++.+.+...... ....++.....+...|+.     +.-+.++
T Consensus       194 D---ivv~S~TKyl~Ghsdv~~G~vv~~~~------~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-----l~~R~~~  259 (386)
T PF01053_consen  194 D---IVVHSATKYLSGHSDVMGGAVVVNGS------SELYDRLREFRRLLGATLSPFDAWLLLRGLRT-----LPLRMER  259 (386)
T ss_dssp             S---EEEEETTTTTTTSSSE-EEEEEESSH------HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-----HHHHHHH
T ss_pred             e---EEEeeccccccCCcceeeEEEEECch------hhhhhhhcchhhhcCccchHHHHHHHhcCCCc-----HHHHHHH
Confidence            3   8899999997654433 566665431      2455555544332 234555555555555543     6677788


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCC----------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCee-EEe-
Q 014631          321 LRDTADICYDRIKEIPCITCPRKP----------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI-VLP-  382 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~-v~~-  382 (421)
                      ..++...+.+.|+++|.+.-+..|                ..|..+.++++..        .+.+..+++.-.+. ..+ 
T Consensus       260 ~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~--------~~~~~~f~~~l~l~~~~~S  331 (386)
T PF01053_consen  260 QNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG--------EEAARRFLDALKLFSIAPS  331 (386)
T ss_dssp             HHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH--------HHHHHHHHHH-SSSEESSS
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc--------hhhhHhHHhhhhhHhhhhh
Confidence            889999999999998876534344                2233566677642        22333444444443 111 


Q ss_pred             -CCCC----------C------------C-CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          383 -GMAV----------G------------M-KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       383 -g~~~----------~------------~-~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                       |...          +            . ++.+|+|++.  |+.+.+++.|.++++
T Consensus       332 lGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl--Ed~~dLi~Dl~~AL~  386 (386)
T PF01053_consen  332 LGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL--EDPDDLIADLEQALE  386 (386)
T ss_dssp             -SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S--S-HHHHHHHHHHHHH
T ss_pred             cCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc--CCHHHHHHHHHHhcC
Confidence             1110          0            0 3679999995  456677777777764

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.85  E-value=2.2e-18  Score=166.05  Aligned_cols=348  Identities=13%  Similarity=0.067  Sum_probs=213.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|...... ...+|.+.+++.+++++.... .. ..-..+.+..+++.+.+..+  ...+.++++++|++
T Consensus        44 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~-~~-~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE  118 (466)
T PRK07030         44 FEGKRYLDAVSSWWVNVF-GHANPRINQRIKDQVDQLEHV-IL-AGFSHEPVIELSERLVKITP--PGLSRCFYADNGSS  118 (466)
T ss_pred             CCCCEEEEcchhHHhhcC-CCCCHHHHHHHHHHHHhcCCc-cc-cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence            458899999887544322 256789999999999863211 10 01112444455555544222  23468999999999


Q ss_pred             HHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCC--CccC-------
Q 014631          121 AIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEK--GWEV-------  170 (421)
Q Consensus       121 al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~-------  170 (421)
                      |+..+++...       .+| .+|+....+|++....+...+..             +..+|.....  .++.       
T Consensus       119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~  198 (466)
T PRK07030        119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR  198 (466)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence            9999988752       123 57899999999876554432211             1112211100  0011       


Q ss_pred             -CHHHHHhhhcc--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          171 -DLDGLEALADE--NTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       171 -d~e~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                       +++.+++.+..  +..+.++..|  +...|.. .+++.++++.++|++||+++|.||+++++.+.|..+ ....++...
T Consensus       199 ~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~-a~~~~gv~P  277 (466)
T PRK07030        199 RMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAGIRP  277 (466)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch-HHHhcCCCC
Confidence             24556666642  3345566666  5556764 567889999999999999999999999987777633 222333333


Q ss_pred             CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhh-------h-cccccCCchHHHHHHHHHhhccchhHHH
Q 014631          245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKG-------Y-LNISSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      +++   +++|.+ ..| +++|.++++        +++++.+..       . ...+.+.++++++++.++|+...++.  
T Consensus       278 Div---~~gKgl-~gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~--  343 (466)
T PRK07030        278 DFL---CLSKAL-TGGYLPLAAVLTT--------DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDN--  343 (466)
T ss_pred             CEE---eeehhc-cCCcccceEEEec--------HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcC--
Confidence            344   568995 467 599999985        356666532       1 12345678999999988887643322  


Q ss_pred             HHHHHHHHHHHHHHHHhhc---CCCccccCCCCceeEEEEecCccccc--CC-CC---hHHHHHHHHhhcCeeEEeCCCC
Q 014631          316 KIVDILRDTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLE--GI-SD---DMEFALQLAKEESVIVLPGMAV  386 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~--~~-~~---~~~~~~~ll~~~gv~v~~g~~~  386 (421)
                       ..++.+++.+++.+.|++   .|.+..+ . .-|++..+++......  .. .+   ...+... +.++||.+.+.   
T Consensus       344 -l~~~~~~~G~~l~~~L~~l~~~~~v~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~---  416 (466)
T PRK07030        344 -VIENNRALARRMAEATAHLADHPHVAEV-R-QTGMILAIEMVQDKASKTPYPWQERRGLKVYQH-ALERGALLRPL---  416 (466)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCCEEEe-E-eceeEEEEEeccCccccccCcchhHHHHHHHHH-HHHCCeEEEec---
Confidence             233344444444444443   4444312 2 3366677777432100  00 00   1234444 46789999763   


Q ss_pred             CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          387 GMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                        .+.+|+.++  .+++++++++++|.++++++
T Consensus       417 --g~~i~~~Ppl~it~~eid~~~~~l~~al~~~  447 (466)
T PRK07030        417 --GSVVYFLPPYVITPEQIDFLAEVASEGIDIA  447 (466)
T ss_pred             --CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence              257899876  79999999999999999876

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.85  E-value=1.7e-18  Score=164.97  Aligned_cols=222  Identities=16%  Similarity=0.120  Sum_probs=152.4

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~  163 (421)
                      ...+++.++++.+      . . ..+++++++.|+..++..+.++||+|+++...|.+..    ..+...|+++..++ +
T Consensus        71 ~~~le~~la~l~g------~-~-~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~  141 (437)
T PRK05613         71 VEALENRIASLEG------G-V-HAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-N  141 (437)
T ss_pred             HHHHHHHHHHHhC------C-C-eEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-C
Confidence            5688888888873      2 3 4444555558888888888899999999999998764    34467898888886 2


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                      +     .|++++++.+++++++|++..+.||+|.+   .++++|.++|+++|+++|+|.+++...    ...++ .++.+
T Consensus       142 ~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v---~di~~I~~la~~~gi~livD~t~a~g~----~~~p~-~~GaD  208 (437)
T PRK05613        142 P-----DDPESWQAAVQPNTKAFFGETFANPQADV---LDIPAVAEVAHRNQVPLIVDNTIATAA----LVRPL-ELGAD  208 (437)
T ss_pred             C-----CCHHHHHHhCCccCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCeEEEECCCcccc----ccChH-HhCCC
Confidence            2     27899999999999999888999999988   558999999999999999999986532    12222 22332


Q ss_pred             CCEEEEcccccccCCCCceEEEEEeeCCCcc----------------------------hhHHHHHH-HHhh-hcccccC
Q 014631          244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGI----------------------------LQELRIVD-SIKG-YLNISSG  293 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~----------------------------~~~~~~~~-~~~~-~~~~~~~  293 (421)
                         +++.|++|.++..|.-+|.+++.+....                            ..+..+.. .... ......+
T Consensus       209 ---ivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  285 (437)
T PRK05613        209 ---VVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGAT  285 (437)
T ss_pred             ---EEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence               8888999998777666666555321100                            00001110 1111 1122335


Q ss_pred             CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          294 PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      .++.....+..-|+.     +.-+.++..++...+.+.|+++|.+.
T Consensus       286 ~~p~~a~l~~rgl~T-----L~lR~~~~~~nA~~lA~~L~~hp~V~  326 (437)
T PRK05613        286 LSPFNAWVTAQGLDT-----LSLRLERHNENAIKVAEFLNNHEKVA  326 (437)
T ss_pred             CCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence            566666555444443     56667788899999999999988764

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.85  E-value=4.9e-18  Score=160.39  Aligned_cols=304  Identities=12%  Similarity=0.131  Sum_probs=194.4

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHH-HHHHHHHHHhcC---CCCeEEEcCCCCcchHHHHhhcCceeEeeec-cC
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCK-QAIQVILTVLAR---PGANILLPKPGFPLYEANARHTRLEIRHFDL-LP  164 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~-~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~  164 (421)
                      .+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++..   +||.|+++..+|.+...++...|++++.++. .+
T Consensus       105 ~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d  183 (444)
T TIGR03531       105 KLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD  183 (444)
T ss_pred             HHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence            44444444444444422 124588888888 688877777652   5899999999999999999999999999985 24


Q ss_pred             CCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc--cc
Q 014631          165 EKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM--GV  239 (421)
Q Consensus       165 ~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~  239 (421)
                      ++.+.+|++++++++.+   +.+++++.+|+  |+.....+++++|.++|++||+++|+|++|+.....   ...+  ..
T Consensus       184 ~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~---~~~~~~~g  258 (444)
T TIGR03531       184 GDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK---YMELINKA  258 (444)
T ss_pred             CcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh---hhhhhhcc
Confidence            55789999999999875   44566666665  333334489999999999999999999999863211   1111  11


Q ss_pred             cCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          240 FGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       240 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      .....-.+++.|++|.+.++|. .|.+++++       +++.+.+...... ...+...+.+...++. ...+++++..+
T Consensus       259 ~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d-------~el~~~i~~~y~g-~~~~s~~~~~~~~ll~-~G~~g~~~li~  328 (444)
T TIGR03531       259 IKVGRVDAVVSSTDKNFMVPVG-GAIIYSFD-------ENFIQEISKSYPG-RASASPSLDVLITLLS-LGSKGYLELLK  328 (444)
T ss_pred             ccccCCCeEEEeCccCCCCCCC-EEEEEECC-------HHHHHHHHHhccC-CCCChHHHHHHHHHHH-hCHHHHHHHHH
Confidence            1110113667799999887775 34444543       3466666554322 2234456666666665 35678888899


Q ss_pred             HHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCee----EEeCC-------C
Q 014631          320 ILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI----VLPGM-------A  385 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~----v~~g~-------~  385 (421)
                      +..++++++.+.|+++   -|..+...|.+..-+-+.+....   . .+...+-.+|..++|.    |.||.       .
T Consensus       329 ~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~---~-~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~  404 (444)
T TIGR03531       329 ERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK---G-KDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCE  404 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc---c-cCHHHHHHHHHhCCCCCceeecCCCceEECCEE
Confidence            9999999999988765   24443334454444444444221   1 1233344455555662    44554       2


Q ss_pred             ---CCC------CCeEEEEe--cCCHHHHHHHHHHHHHH
Q 014631          386 ---VGM------KNWLRITF--AIEPSALEEGLGRIKAF  413 (421)
Q Consensus       386 ---~~~------~~~iRi~~--~~~~e~l~~~~~~l~~~  413 (421)
                         |+.      ..++-++.  +.+++|++.++++|+++
T Consensus       405 ~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~  443 (444)
T TIGR03531       405 FKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS  443 (444)
T ss_pred             eecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence               222      13444443  37899999999999875

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.85  E-value=2.4e-18  Score=165.86  Aligned_cols=348  Identities=12%  Similarity=0.095  Sum_probs=212.3

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|++++|+..|.-.... ...+|.+.+++.+++++.. ...+.   ...+.+..+++.+.+..+  ...+.++++++|+
T Consensus        53 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~~~~~---~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  126 (460)
T PRK06916         53 VNGNEYYDGVSSIWLNVH-GHQVPELDEAIREQLNKIAHSTLLG---LANVPSILLAEKLIEVVP--EGLKKVFYSDSGA  126 (460)
T ss_pred             CCCCEEEEcchhHHHhhc-CCCCHHHHHHHHHHHHhCCCccccc---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence            348889998766432212 3578999999999998721 11111   012334445555544332  2236899999999


Q ss_pred             HHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCC--Ccc-------
Q 014631          120 QAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEK--GWE-------  169 (421)
Q Consensus       120 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~-------  169 (421)
                      +|+..+++....       +| .+|+....+|++....+...+.             .+..+|.+...  .++       
T Consensus       127 eAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~  206 (460)
T PRK06916        127 TAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIV  206 (460)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHH
Confidence            999999886532       33 6899999999987554433221             11222211100  001       


Q ss_pred             -CCHHHHHhhhc--cCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          170 -VDLDGLEALAD--ENTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       170 -~d~e~l~~~~~--~~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                       -+++++++.++  .+..+.++..|  +...|.+ .|++.++++.++|++||+++|.||++.++.+.|..+ ....++..
T Consensus       207 ~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv~  285 (460)
T PRK06916        207 KKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENVT  285 (460)
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCCC
Confidence             13455666664  23344556666  5666765 588889999999999999999999999987777533 22233333


Q ss_pred             CCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhh-------h-cccccCCchHHHHHHHHHhhccchhHH
Q 014631          244 VPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKG-------Y-LNISSGPATFVQGAVPQIFKNTKEDFF  314 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~  314 (421)
                      .+++   +++|.+ .+| +++|.++++        +++++.+..       . ...+.+.+++...++.+.|+...+.  
T Consensus       286 PDiv---~~gK~l-~gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~--  351 (460)
T PRK06916        286 PDIM---TAGKGL-TGGYLPIAITVTT--------DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKT--  351 (460)
T ss_pred             CCee---eeehhh-hcCccccceeeec--------HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence            3333   578996 467 599999985        356665532       1 1224567889988888888753322  


Q ss_pred             HHHHHHHHHHHHHHHHHhhc---CCCccccCCCCceeEEEEecCcccc-cCC--CC---hHHHHHHHHhhcCeeEEeCCC
Q 014631          315 SKIVDILRDTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLL-EGI--SD---DMEFALQLAKEESVIVLPGMA  385 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~-~~~--~~---~~~~~~~ll~~~gv~v~~g~~  385 (421)
                       +..++.+++.+++.+.|++   .+.+..+ .. -|.+..+++..... ...  .+   ...+.. .+.++||.+.+.  
T Consensus       352 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG-~Glm~giel~~~~~~~~~~~~~~~~~~~i~~-~~~~~Gvl~~~~--  425 (460)
T PRK06916        352 -NLIEQVARKTEYVATQLEDLFALKHVGDI-RQ-LGLMVGIELVKNKETKEPFEWTERVGVQVCK-RSRELGMLTRPL--  425 (460)
T ss_pred             -cHHHHHHHHHHHHHHHHHHhhcCCCeEEe-ec-CCceeeEEeecccccccCCCchhhHHHHHHH-HHHHCCeEEEec--
Confidence             2334455555555555554   3333212 22 35566666643210 000  00   123444 456789999874  


Q ss_pred             CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          386 VGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       386 ~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                         .+.+|+.++  .+++++++++++|.++++++.
T Consensus       426 ---g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~  457 (460)
T PRK06916        426 ---GNTIVFMPPLASTIDELDEMLRILYKAISDVT  457 (460)
T ss_pred             ---CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence               257898876  799999999999999998764

>PRK07036 hypothetical protein; Provisional

Probab=99.85  E-value=5.3e-18  Score=163.56  Aligned_cols=350  Identities=17%  Similarity=0.194  Sum_probs=211.1

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|..++|+..|...... ...+|.+.+++.+++.+... ..+..  ...+.+..+++.+....+  ...+.++++++|+
T Consensus        48 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs  122 (466)
T PRK07036         48 ADGRRYLDGIGGMWCVNV-GYGREEMADAIADQARRLPYYTPFGD--MTNAPAAELAAKLAELAP--GDLNHVFLTTGGS  122 (466)
T ss_pred             CCCCEEEECcccHHhhcC-CCCCHHHHHHHHHHHHhCcccccccc--cCCHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence            458899999887544332 25689999999999886311 11210  113445555555554332  2246899999999


Q ss_pred             HHHHHHHHHhc------C-CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCC--CCccCC-----
Q 014631          120 QAIQVILTVLA------R-PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPE--KGWEVD-----  171 (421)
Q Consensus       120 ~al~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~~d-----  171 (421)
                      +|+..+++...      . +| .+|+....+|++....+......             +..++.+..  ..++..     
T Consensus       123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  202 (466)
T PRK07036        123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC  202 (466)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence            99999988642      1 22 57888999999876544332111             122221110  011111     


Q ss_pred             ---HHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc-ccCC
Q 014631          172 ---LDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG-VFGS  242 (421)
Q Consensus       172 ---~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~  242 (421)
                         .+.+++.+.   ++..+.++..| +...|.. .|++.++++.++|++||+++|+||+++++.+.|..+ ... .++.
T Consensus       203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~~gv  281 (466)
T PRK07036        203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAVFGI  281 (466)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhhcCC
Confidence               233444442   23345556666 5556765 577889999999999999999999999987776532 222 2232


Q ss_pred             CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------c-ccccCCchHHHHHHHHHhhccchhH
Q 014631          243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------L-NISSGPATFVQGAVPQIFKNTKEDF  313 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~  313 (421)
                      ..+++   +++|.+ ..| +++|.++++        +++++.+...       . ..+.+.++++++++.+.|+...+. 
T Consensus       282 ~PDiv---t~gK~l-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~-  348 (466)
T PRK07036        282 QPDII---TFAKGL-TSGYQPLGAVIIS--------ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMERE-  348 (466)
T ss_pred             CCCEE---EEcccc-ccCccccEEEEEc--------HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhC-
Confidence            22333   678996 457 589999985        3566666421       1 124577899999998888753322 


Q ss_pred             HHHHHHHHHHHHHHHHHHhh---cCCCccccCCCCceeEEEEecCcccc-cCC-CC----hHHHHHHHHhhcCeeEEeCC
Q 014631          314 FSKIVDILRDTADICYDRIK---EIPCITCPRKPEGSMFVMVKLNLSLL-EGI-SD----DMEFALQLAKEESVIVLPGM  384 (421)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~~----~~~~~~~ll~~~gv~v~~g~  384 (421)
                        +..++.+++.+++.+.|+   +.|.+..+ . .-|.+..+++..... .+. ..    ...+. ..+.++||.+.+..
T Consensus       349 --~l~~~~~~~g~~l~~~L~~l~~~~~v~~v-r-G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gvl~~~~~  423 (466)
T PRK07036        349 --GLCEHVREVGPYFEERLASLRELPLVGDV-R-GDHLMACVECVADKGSKALLPEDIAIGQRID-RHCQERGLLVRPLE  423 (466)
T ss_pred             --CHHHHHHHHHHHHHHHHHHhccCCCEEEE-E-eeceEEEEEEccCccccCCCCchhHHHHHHH-HHHHHCCcEEeecC
Confidence              223334444444444443   34333212 2 235666777743210 000 00    12344 34567899998642


Q ss_pred             CCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          385 AVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       385 ~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                           +.+|++++  .+++++++++++|.++++++.+
T Consensus       424 -----~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~  455 (466)
T PRK07036        424 -----HLCVLSPPLIITRAQIDEIVAILRAAIEETAD  455 (466)
T ss_pred             -----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence                 46889976  6999999999999999877643

>PRK06148 hypothetical protein; Provisional

Probab=99.85  E-value=4.2e-18  Score=178.06  Aligned_cols=351  Identities=13%  Similarity=0.076  Sum_probs=212.8

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|+.++||..|...   ....+|.+.+++.+++.+...+....    .+.+..+++.+.+..+  ...+.++|+++|++
T Consensus       621 ~dG~~ylD~~~g~~~---lGH~hp~v~~Ai~~q~~~l~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsE  691 (1013)
T PRK06148        621 NRGRAYLDCFNNVCH---VGHAHPRVVAAAARQAARLNTNTRYL----HDAIVAYAERLTATLP--DGLTVAFFVNSGSE  691 (1013)
T ss_pred             CCCCEEEEcccChhh---cCCCCHHHHHHHHHHHhhcCCcCCcC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence            348899999877422   23578999999999998642221111    2344445555544332  22367999999999


Q ss_pred             HHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccC--CCCccC-C-------HHHH
Q 014631          121 AIQVILTVLAR-PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLP--EKGWEV-D-------LDGL  175 (421)
Q Consensus       121 al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~~~~~~-d-------~e~l  175 (421)
                      |+..+++.... .| .+|+....+|++....+...+.             .+..++.+.  ...++. +       .+.+
T Consensus       692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  771 (1013)
T PRK06148        692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV  771 (1013)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence            99999987532 23 6789999999987543322110             011111100  001110 1       1334


Q ss_pred             Hhhhc-----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          176 EALAD-----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       176 ~~~~~-----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      ++.+.     .+..+.+|..| +...|. ..|++.++++.++|++||+++|.||+++++.+.|........++....++ 
T Consensus       772 ~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv-  850 (1013)
T PRK06148        772 AEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV-  850 (1013)
T ss_pred             HHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee-
Confidence            44332     13345567777 444555 46778899999999999999999999999887775333444344333333 


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc--ccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTA  325 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~  325 (421)
                        +++|.+ .+|+++|.++++        +++++.+....  ..+.+.|+++++++.+.|+...++ ..++.++.-...+
T Consensus       851 --t~gK~l-ggG~Plgav~~~--------~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~  919 (1013)
T PRK06148        851 --TMGKPI-GNGHPMGAVVTT--------REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLL  919 (1013)
T ss_pred             --eecccc-cCCcceEEEEEc--------HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence              678995 568999999995        46777665322  235678999999998888754332 2233333333333


Q ss_pred             HHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCH
Q 014631          326 DICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEP  400 (421)
Q Consensus       326 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~  400 (421)
                      +.+.+..++.|.+..+ . ..|.++.+++.........+   ...++.. +.++||++.+....  .+.+|+.++  .++
T Consensus       920 ~~L~~l~~~~~~i~~V-r-G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g~~--~~vlr~~Ppl~it~  994 (1013)
T PRK06148        920 AGLRELQDRFDIIGDV-R-GMGLFLGIELVTDRKTKAPATAIARYVKNG-ARERGILIGTEGPH--DNVLKIRPPLIFSR  994 (1013)
T ss_pred             HHHHHHHHhCCCceEE-e-eeceEEEEEecCCccccCccHHHHHHHHHH-HHhCCeEEeccCCC--CCEEEEeCCccCCH
Confidence            3333333334433312 2 33567677774321000001   2234444 46789999764221  478899887  899


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 014631          401 SALEEGLGRIKAFCQRH  417 (421)
Q Consensus       401 e~l~~~~~~l~~~~~~~  417 (421)
                      +++++++++|.+++.+.
T Consensus       995 ~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148        995 ADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999999875

>PRK06149 hypothetical protein; Provisional

Probab=99.85  E-value=3.8e-18  Score=178.35  Aligned_cols=345  Identities=14%  Similarity=0.112  Sum_probs=208.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC-YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      .|++++|+..|...   ....+|.+.+++.+++.+..... | ......++.+.+++++      +...+.++++++|++
T Consensus       583 dG~~ylD~~~~~~~---lGh~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~elae~L~~~~------p~~~~~v~f~~SGsE  652 (972)
T PRK06149        583 AGRSYLDMVNNVTV---LGHGHPRLAAAAARQWSLLNTNSRF-HYAAVAEFSERLAALA------PDGLDTVFLVNSGSE  652 (972)
T ss_pred             CCCEEEECCCCccc---cCCCCHHHHHHHHHHHHhccccccc-cCHHHHHHHHHHHHhC------CCCcCEEEEeCCchH
Confidence            48899999876421   12478999999999998643211 2 1112234555555543      122468999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-C-----c--------eeEeeeccCC--CCcc-CC-----HHHHH
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHT-R-----L--------EIRHFDLLPE--KGWE-VD-----LDGLE  176 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~d-----~e~l~  176 (421)
                      |+..+++...  ...++|+..+.+|+++...+... +     .        .+..++....  ..+. .+     .++++
T Consensus       653 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~  732 (972)
T PRK06149        653 ANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVV  732 (972)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHH
Confidence            9999998432  12367888898999865433211 1     0        0112221110  0111 11     23333


Q ss_pred             hhhc-----cCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          177 ALAD-----ENTVAMVIVNP-GNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       177 ~~~~-----~~~~~i~~~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      +.+.     .+..+.+++.| +...| ...|++.++++.++|++||+++|+||+++++++.|..+..+..++...+++  
T Consensus       733 ~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--  810 (972)
T PRK06149        733 AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--  810 (972)
T ss_pred             HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--
Confidence            3221     23345567777 44445 457788899999999999999999999998877776443444344333333  


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc--ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI  327 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  327 (421)
                       +++|.+ ..|.++|+++++        +++++.+....  ..+.+.|+++++++.+.|+...++.   ..+..+++.++
T Consensus       811 -t~gK~l-g~G~Pl~av~~~--------~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~---l~~~~~~~G~~  877 (972)
T PRK06149        811 -TMAKGM-GNGHPLGAVITR--------REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEK---LQENARRVGDH  877 (972)
T ss_pred             -Eecccc-cCCeeeEEEEEc--------HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence             789996 467999999995        35777665321  2234788999999988887533322   22333333334


Q ss_pred             HHHHh----hcCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C
Q 014631          328 CYDRI----KEIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I  398 (421)
Q Consensus       328 ~~~~l----~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~  398 (421)
                      +++.|    .+.|.+..+ . .-|+++.+++.....   +.......+... +.++||.+.+...  ..+.+|+.++  .
T Consensus       878 l~~~L~~l~~~~~~i~~v-r-G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~-l~~~Gvl~~~~g~--~~~vl~~~Ppl~i  952 (972)
T PRK06149        878 LKARLEALADRHPLIGAV-H-GMGLYLGVELVRDRQTLEPATEETAAICDR-LLELGVIMQPTGD--HLNILKIKPPLCL  952 (972)
T ss_pred             HHHHHHHHHHhCCCeEEE-e-ecceEEEEEEecCcccCCCChHHHHHHHHH-HHhCCeEEeecCC--CCCEEEEECCCcC
Confidence            44444    334433322 2 336677777732110   000012344444 4668999987421  1367999887  8


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 014631          399 EPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       399 ~~e~l~~~~~~l~~~~~~  416 (421)
                      +++++++++++|.+++.+
T Consensus       953 t~~~id~~~~~l~~~l~~  970 (972)
T PRK06149        953 DRESADFFVDMLDRVLTE  970 (972)
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            999999999999999865

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.85  E-value=9.8e-18  Score=161.48  Aligned_cols=356  Identities=13%  Similarity=0.097  Sum_probs=210.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEc-CCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLT-AGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~-~g~  118 (421)
                      ..|..++||..|.-.... ...+|.+.+++.+++.+...  +....-..+.+..+++.+....+.... .+.++++ ++|
T Consensus        60 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SG  136 (464)
T PRK06938         60 VEGRQFIDCLAGAGTLAL-GHNHPVVIEAIQQVLADELP--LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTG  136 (464)
T ss_pred             CCCCEEEEccCCcccccc-CCCCHHHHHHHHHHHHhhhc--ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCc
Confidence            348899999877544322 35788999999999875221  111011123444444444332221111 1357665 799


Q ss_pred             HHHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--cc--------CCHH
Q 014631          119 KQAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WE--------VDLD  173 (421)
Q Consensus       119 ~~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~--------~d~e  173 (421)
                      ++|+..+++... ..| .+|+....+|+++...+.....             ++..++.+....  ++        .+++
T Consensus       137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  216 (464)
T PRK06938        137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH  216 (464)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence            999999998653 233 6889999999987654433211             122233221100  00        1356


Q ss_pred             HHHhhhcc-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631          174 GLEALADE-----NTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV  246 (421)
Q Consensus       174 ~l~~~~~~-----~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  246 (421)
                      .+++.+.+     +..+.++..| +...|.+ .|++.++++.++|++||+++|.||+++++.+.|..+ ....++...++
T Consensus       217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PDi  295 (464)
T PRK06938        217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPDV  295 (464)
T ss_pred             HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCCE
Confidence            67776643     1345567777 5555765 568889999999999999999999999997777532 22333433334


Q ss_pred             EEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHH-HHHHHHHHHH
Q 014631          247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFF-SKIVDILRDT  324 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~  324 (421)
                      +   +++|.++ .|+++|.+++++        ++ +.+... ...+.+.++++++++.+.|+...++.+ ++.++.-...
T Consensus       296 v---~~gKglg-gG~PlsAv~~~~--------~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l  362 (464)
T PRK06938        296 V---VLSKAIG-GSLPLAVVVYRE--------WL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERL  362 (464)
T ss_pred             E---Eeecccc-CCCceEEEeehh--------Hh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4   5689964 689999999852        22 333222 223557889999999998875333322 2222222233


Q ss_pred             HHHHHHHhhcCCCccccCCCCceeEEEEecCccc-ccC----CC-C---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631          325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-LEG----IS-D---DMEFALQLAKEESVIVLPGMAVGMKNWLRIT  395 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~----~~-~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~  395 (421)
                      ++.+.+..+++|.+..+ . .-|++..+++.... ...    .. +   ...+.. .+.++|+.+.++..+  .+.+|+.
T Consensus       363 ~~~L~~l~~~~~~i~~V-r-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gll~~~~g~~--~~~l~~~  437 (464)
T PRK06938        363 REHLRQLQRDYPQLGDV-R-GRGLMLGVEIVDPQGEPDALGHPPANGELASLIQR-ECLRRGLILELGGRH--GSVVRFL  437 (464)
T ss_pred             HHHHHHHHHhCCCeeee-e-ccceEEEEEeccCcccccccccCCccHHHHHHHHH-HHHHCCeEEeecCCC--CCEEEEE
Confidence            33333322345433322 2 33567777774321 000    00 0   123344 446789999875322  3689998


Q ss_pred             ec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          396 FA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       396 ~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++  .++++++++++++.+++++.-
T Consensus       438 Ppl~it~~eid~~~~~l~~~l~~~~  462 (464)
T PRK06938        438 PPLIITAEQIDEVAEIFAEAVAAAV  462 (464)
T ss_pred             CCCccCHHHHHHHHHHHHHHHHHHh
Confidence            76  799999999999999998754

>PRK07480 putative aminotransferase; Validated

Probab=99.85  E-value=3.7e-18  Score=164.25  Aligned_cols=354  Identities=15%  Similarity=0.121  Sum_probs=209.5

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.+++||..|...... ...+|.+.+++.+++++..... .......+.+..+++.+....+  ...+.++++++|++
T Consensus        47 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse  122 (456)
T PRK07480         47 SEGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSE  122 (456)
T ss_pred             CCCCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence            458899999877533322 2568999999999998632110 0001123444445555544332  23468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCC--CCccCC------
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPE--KGWEVD------  171 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~~d------  171 (421)
                      |+..+++....       +| .+|+....+|++....+...+..             +..++.+..  ..+..+      
T Consensus       123 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  202 (456)
T PRK07480        123 ANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGL  202 (456)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHH
Confidence            99999876532       33 46888899999875433222211             111111000  000011      


Q ss_pred             --HHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          172 --LDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       172 --~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                        .+.+++.+.   ++..+.++..| +...|.. .|.+.++++.++|++||+++|+||+++++.+.|..+ ....++...
T Consensus       203 ~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~P  281 (456)
T PRK07480        203 AAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFGIKP  281 (456)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcCCCC
Confidence              255554442   23344556666 5556775 566779999999999999999999999987777543 222333332


Q ss_pred             CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHh--h--h-cccccCCchHHHHHHHHHhhccchhH-HHHH
Q 014631          245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIK--G--Y-LNISSGPATFVQGAVPQIFKNTKEDF-FSKI  317 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~--~--~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~  317 (421)
                      +++   +++|.++ .| +++|.++++        +++++.+.  .  . ...+.+.++++++++.++|+...++. .++.
T Consensus       282 Div---~~gK~l~-gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~  349 (456)
T PRK07480        282 DLM---TIAKGLT-SGYIPMGAVGVG--------DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERV  349 (456)
T ss_pred             Cee---eeehhhc-cCCccceEEEEc--------HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHH
Confidence            333   6789954 56 489999985        35666662  1  1 12356788999999999887533322 2222


Q ss_pred             -HHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc--cCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631          318 -VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISD---DMEFALQLAKEESVIVLPGMAVGMKNW  391 (421)
Q Consensus       318 -~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~  391 (421)
                       .+.-...++.+.+ +.+.|.+..+ . .-|++..+++.....  ....+   ....+...+.++||.+.+.     .+.
T Consensus       350 ~~~~g~~l~~~l~~-l~~~~~i~~v-r-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~~~  421 (456)
T PRK07480        350 RDDTGPYLQKRLRE-LADHPLVGEV-R-GVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-----GDR  421 (456)
T ss_pred             HHHHHHHHHHHHHH-hhcCCCeeeE-E-eecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec-----CCE
Confidence             1222333333333 3444333212 2 235666677742210  00001   1123334456789999763     257


Q ss_pred             EEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          392 LRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +|++++  .++++|++++++|.+++.++.+
T Consensus       422 l~~~Ppl~it~~eid~~~~~l~~al~~~~~  451 (456)
T PRK07480        422 MIISPPLVITHAEIDELVEKARKALDATAA  451 (456)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999988  5999999999999999987643

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.84  E-value=2.9e-20  Score=163.10  Aligned_cols=290  Identities=16%  Similarity=0.209  Sum_probs=185.3

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC----C--CeEEEcCCCCcchHHHHhhcCceeEee
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP----G--ANILLPKPGFPLYEANARHTRLEIRHF  160 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~----g--d~Vl~~~p~y~~~~~~~~~~g~~~~~~  160 (421)
                      -.++|++.|.++...-.+..++...|++++|+|+.+++++.+|...    +  -+|+...|.|+.|........-.....
T Consensus        44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w  123 (363)
T PF04864_consen   44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW  123 (363)
T ss_dssp             S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred             ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence            3589999999988776665566678999999999999999998532    1  379999999999987776554332222


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      .-+. ..|.       ..-...+-+=++++||||.|.+     .+.++   +.-+..+|.|-+|..-.|     .++...
T Consensus       124 ~Gda-~~~~-------~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhy-----TpI~~~  182 (363)
T PF04864_consen  124 AGDA-SNFK-------NSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHY-----TPITAP  182 (363)
T ss_dssp             EEEC-CCGT-------T-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTT-----S---S-
T ss_pred             cccH-Hhhc-------cCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccc-----cccCCC
Confidence            2111 1121       1001223344899999999998     55444   355667899999987333     333332


Q ss_pred             CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccch--------
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKE--------  311 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~--------  311 (421)
                      .  +..|.+.|+||.-|-+|.|+||.++.|       +++.+++..+... +.+.+.-+|.-+.+.|+...+        
T Consensus       183 a--D~DiMLFT~SK~TGHAGSR~GWAlVKD-------~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~  253 (363)
T PF04864_consen  183 A--DHDIMLFTLSKLTGHAGSRFGWALVKD-------EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGT  253 (363)
T ss_dssp             B----SEEEEEHHHHCS-GGG-EEEEEES--------HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTT
T ss_pred             C--CCceEEEEEecccCccccccceeeecC-------HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCc
Confidence            2  223888899999899999999999975       5688888887653 457888888888777764221        


Q ss_pred             -hHHHHHHHHHHHHHHHHHHHhhcCCCccccC-CC-----------CceeEEEEecCcccccCCCChHHHHHHHHhhcCe
Q 014631          312 -DFFSKIVDILRDTADICYDRIKEIPCITCPR-KP-----------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESV  378 (421)
Q Consensus       312 -~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv  378 (421)
                       ..+.--.+.++++-+.+.+.++.-..+.+.. .|           ...-|.|++++..       ....|...+++.||
T Consensus       254 ~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-------ed~DC~~~l~~~~I  326 (363)
T PF04864_consen  254 EDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-------EDEDCYAVLREAKI  326 (363)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-------GGSSHHHHHHCTTE
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-------ccccHHHHHHhCCc
Confidence             2445556788899999999987642232111 11           1245999999753       22346677889999


Q ss_pred             eEEeCCCCCC-CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          379 IVLPGMAVGM-KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       379 ~v~~g~~~~~-~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      .-+.|..|+. ..++|+|+-.++++++.++++|...
T Consensus       327 ~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l  362 (363)
T PF04864_consen  327 ITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL  362 (363)
T ss_dssp             EEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred             ccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence            9999999987 5799999999999999999998753

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.84  E-value=2e-18  Score=152.74  Aligned_cols=341  Identities=18%  Similarity=0.160  Sum_probs=222.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS--AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      +|++++|+..|..+...+ ..+|.+.+++.+++..  +....|.... .-++.+++++.+      +.+-..++|+++|+
T Consensus        48 ~G~ryLD~f~Gi~tvslG-HchP~v~~a~~kQl~~l~H~t~~~~~~p-i~~~Ae~L~s~~------P~~l~~vfF~nsGs  119 (442)
T KOG1404|consen   48 EGRRYLDAFGGIVTVSLG-HCHPDVVAAAVKQLKKLYHTTSGYLNPP-IHDLAEALVSKL------PGDLKVVFFVNSGS  119 (442)
T ss_pred             CCceeehhhCCeEEEEcC-CCChHHHHHHHHhhhhhEEeeccccCCc-HHHHHHHHHHhC------CCCceEEEEecCCc
Confidence            488899998887554333 6889999999999864  2333554332 467888888877      44556799999999


Q ss_pred             HHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-CceeEeeec-----------cCC--CC-ccC---------CHH
Q 014631          120 QAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-RLEIRHFDL-----------LPE--KG-WEV---------DLD  173 (421)
Q Consensus       120 ~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~-----------~~~--~~-~~~---------d~e  173 (421)
                      +|++++++... .-| -.|+....+|++....+... +......+.           .|+  .+ |+=         -.+
T Consensus       120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~  199 (442)
T KOG1404|consen  120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK  199 (442)
T ss_pred             hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence            99999887643 222 36777777888765444322 222221111           010  00 110         123


Q ss_pred             HHHhhh---ccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          174 GLEALA---DENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       174 ~l~~~~---~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      ++++.+   .+.+.+.++..+ +...|++ +++..+++..++|+++|.++|.||++++|.+.| .++.+...+..   =-
T Consensus       200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~---PD  275 (442)
T KOG1404|consen  200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGVV---PD  275 (442)
T ss_pred             HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCCC---cc
Confidence            444433   345566677777 5556765 788999999999999999999999999999888 55555554432   23


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-c-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-N-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD  326 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  326 (421)
                      +-|++|.+ ..|+++|.++++        +++++-+.+.. . .+.+.++++++++.++|+...++.+.+   ...+...
T Consensus       276 IvTmAKgi-GnG~Pl~AVvtt--------~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE---~aa~vG~  343 (442)
T KOG1404|consen  276 IVTMAKGI-GNGFPLGAVVTT--------PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQE---NAAEVGS  343 (442)
T ss_pred             HHHHHhhc-cCCCcceeeecC--------HHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHH---HHHHHHH
Confidence            45899995 678999999985        57888777665 2 356889999999988887644444433   3344444


Q ss_pred             HHHHHhhc----CCCccccCCCCceeEEEEecCcccccCC---CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--
Q 014631          327 ICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLLEGI---SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--  397 (421)
Q Consensus       327 ~~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--  397 (421)
                      ++.+.|.+    +|-+..+  ..-|.++.+++-....+..   ..-..++.+.+++.|+.|.-|..++  +.+||++.  
T Consensus       344 yl~~~l~~l~d~h~iIGdV--RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G--~vfriaPPlc  419 (442)
T KOG1404|consen  344 YLLEKLAALKDKHPIIGDV--RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG--NVFRIAPPLC  419 (442)
T ss_pred             HHHHHHHHHhhcCCceeec--ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc--eEEEecCCee
Confidence            55555543    3444322  2336777777644321111   1123455666789999997776655  38999987  


Q ss_pred             CCHHHHHHHHHHH
Q 014631          398 IEPSALEEGLGRI  410 (421)
Q Consensus       398 ~~~e~l~~~~~~l  410 (421)
                      .|+||++.+++..
T Consensus       420 iT~edi~f~~~~~  432 (442)
T KOG1404|consen  420 ITKEDIDFAVEYF  432 (442)
T ss_pred             ccHHHHHHHHHHH
Confidence            7999997777654

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.84  E-value=6.8e-18  Score=161.84  Aligned_cols=343  Identities=16%  Similarity=0.093  Sum_probs=206.1

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|.-.... ...+|.+.+++.+++.+.....+ +    .+.+..+++.+.+..+   ..+.++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~-~----~~~~~~la~~l~~~~p---~~~~v~f~~sGse  120 (428)
T PRK12389         50 VDGNKYIDYLAAYGPIIT-GHAHPHITKAITEAAENGVLYGT-P----TELEIEFAKMLKEAIP---SLEKVRFVNSGTE  120 (428)
T ss_pred             CCCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCccCC-C----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence            348899999877544322 35789999999999987432122 2    2334455555544332   2468999999999


Q ss_pred             HHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhc-CceeEe--------eeccCCCC-c---cCCHHHHHhhhcc--Cc
Q 014631          121 AIQVILTVLAR-PG-ANILLPKPGFPLYEANARHT-RLEIRH--------FDLLPEKG-W---EVDLDGLEALADE--NT  183 (421)
Q Consensus       121 al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~-g~~~~~--------~~~~~~~~-~---~~d~e~l~~~~~~--~~  183 (421)
                      |+..+++.... .| .+|+....+|++....+... |.....        ++.....+ .   --|++.+++.+..  +.
T Consensus       121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  200 (428)
T PRK12389        121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE  200 (428)
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence            99999986532 23 67888899999876544332 211100        00000000 0   0167888877742  23


Q ss_pred             eEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631          184 VAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW  261 (421)
Q Consensus       184 ~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  261 (421)
                      .+.++..| +...|.+. +++.+++|.++|++||+++|+||+++++ +.+... ....++...++   .+++|.+ ..|+
T Consensus       201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~-a~~~~gv~PDi---vt~gK~l-ggG~  274 (428)
T PRK12389        201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGG-AQDLLGVEPDL---TALGKII-GGGL  274 (428)
T ss_pred             EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcch-hhHHhCCCCCe---eeechhh-cCCC
Confidence            44556666 66678654 6788999999999999999999999987 333221 11112222223   3789996 5679


Q ss_pred             eEEEEEeeCCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc---
Q 014631          262 RLGWLVTSDPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE---  334 (421)
Q Consensus       262 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~---  334 (421)
                      ++|.++++        +++++.+...    ...+.+.|+++.+++.+.|+...++   +..++.+++.+++.+.|++   
T Consensus       275 Pi~av~~~--------~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~  343 (428)
T PRK12389        275 PIGAYGGR--------KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAE  343 (428)
T ss_pred             ceeEEeEH--------HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHH
Confidence            99999884        4677766421    1234578899999988888753322   2333444445555554443   


Q ss_pred             -CCCccccCCCCceeEEEEecCcccccC-----CCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHH
Q 014631          335 -IPCITCPRKPEGSMFVMVKLNLSLLEG-----ISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEE  405 (421)
Q Consensus       335 -~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~  405 (421)
                       +|.+..+ ....|+ +.+.+.......     ..+   ...+.. .+.++||.+.+..    .+.+.+++..+++++++
T Consensus       344 ~~~~~~~v-~r~~g~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~~~~~~----~~~~~~~l~~t~e~id~  416 (428)
T PRK12389        344 KHGITITI-NRLKGA-LTVYFTDEKVTNYDQAERSDGEAFGKFFK-LMLNQGINLAPSK----YEAWFLTTAHTEEDIEE  416 (428)
T ss_pred             hCCCCEEE-EecCcE-EEEEEeCCCCCChhhhcccCHHHHHHHHH-HHHHCCcEeecCC----CCCeeecCCCCHHHHHH
Confidence             4322112 122233 334443211000     001   123444 4567899998752    12345666689999999


Q ss_pred             HHHHHHHHHHH
Q 014631          406 GLGRIKAFCQR  416 (421)
Q Consensus       406 ~~~~l~~~~~~  416 (421)
                      +++++.+++++
T Consensus       417 ~~~~l~~~l~~  427 (428)
T PRK12389        417 TLEAVDRAFAQ  427 (428)
T ss_pred             HHHHHHHHHHh
Confidence            99999999865

>PLN03032 serine decarboxylase; Provisional

Probab=99.84  E-value=6.3e-18  Score=157.16  Aligned_cols=286  Identities=16%  Similarity=0.093  Sum_probs=194.9

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcE--EEcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDV--YLTAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  163 (421)
                      ..++++.+.+++.+.+|  .+++++  ++|+|||+++...+....  .++..|+++.-.|++....++.+|.++..+|++
T Consensus        64 a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d  141 (374)
T PLN03032         64 SRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTL  141 (374)
T ss_pred             HHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeC
Confidence            46778888888877776  455666  999999999998876643  245689999999999999999999998888875


Q ss_pred             CCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC-----cEEEEcccccccccCC-CCc
Q 014631          164 PEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG-----IMVISDEVYDHLTFGS-TPY  234 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-----~~li~De~~~~~~~~~-~~~  234 (421)
                      +  ++.+|+++|++.+++   ++.+++++..+|+||.+   +++++|+++|+++|     +++++|.+|+++...- ...
T Consensus       142 ~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~  216 (374)
T PLN03032        142 P--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRA  216 (374)
T ss_pred             C--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCC
Confidence            4  446999999999876   35677788889999999   77899999999996     5899999998743210 000


Q ss_pred             ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--------cccCCchHHHHHHHHHh
Q 014631          235 VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--------ISSGPATFVQGAVPQIF  306 (421)
Q Consensus       235 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l  306 (421)
                      ..+ .+... -.-+..|.||.++ ....+|++++++.        ..+.+.....        ..++-+......+...|
T Consensus       217 ~~~-~~~~~-vDSis~s~HK~~g-~P~g~G~ll~r~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l  285 (374)
T PLN03032        217 PEV-TFRKP-IGSVSVSGHKFLG-CPMPCGVALTRKK--------HVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTL  285 (374)
T ss_pred             ccc-CCCcC-CcEEEECcccccC-CCcCeEEEEEEch--------hhHhhccCCcccCCCCCcccCCCchHHHHHHHHHH
Confidence            001 11111 1134558999954 3455899999742        2333322111        11122223444555556


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC
Q 014631          307 KNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV  386 (421)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~  386 (421)
                      .....+++.+..++..++.+++.+.|++. ++.++..|... .+.++-+        ...    .+.  +|..+.+-   
T Consensus       286 ~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~-~V~f~~~--------~~~----~~~--~~w~l~~~---  346 (374)
T PLN03032        286 RRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSS-TVVFERP--------MDE----AFI--KKWQLACE---  346 (374)
T ss_pred             HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCce-EEEEcCC--------CcH----hHh--heeeeccc---
Confidence            65567888999999999999999999986 77655556533 3333332        111    122  35555431   


Q ss_pred             CCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          387 GMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                        ++.+|+++.  ++++.++++++.|++
T Consensus       347 --~~~~hi~vm~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        347 --GDIAHVVVMPNVTVEKLDEFVEELVE  372 (374)
T ss_pred             --CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence              358999986  678999999998875

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.84  E-value=9.6e-18  Score=156.13  Aligned_cols=325  Identities=16%  Similarity=0.139  Sum_probs=210.0

Q ss_pred             HHHHHH-HHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014631           64 PVAADA-VVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPG  142 (421)
Q Consensus        64 ~~v~~a-~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~  142 (421)
                      ..+.++ +.......  ..|..+..+.+|++.++++++        .+.++.|++|+.|++++....++|||.|  +.+.
T Consensus        50 ~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~va~~~G--------~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~  117 (450)
T TIGR02618        50 NAMSDKQWAGLMMGD--EAYAGSRNFYHLERTVRELYG--------FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM  117 (450)
T ss_pred             HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence            344444 44443332  258877888999999999984        4579999999999998877778999977  6677


Q ss_pred             Ccch-HHHHhhcCceeEeeeccC--------CCCccCCHHHHHhhhcc----CceEEEEeCCCCC-cccccCHHHHHHHH
Q 014631          143 FPLY-EANARHTRLEIRHFDLLP--------EKGWEVDLDGLEALADE----NTVAMVIVNPGNP-CGNVFTYQQLQKIA  208 (421)
Q Consensus       143 y~~~-~~~~~~~g~~~~~~~~~~--------~~~~~~d~e~l~~~~~~----~~~~i~~~~p~np-tG~~~~~~~l~~i~  208 (421)
                      |... .......|+.++.++.+.        ...+.+|++++++.+++    +++.+.+.+++|. .|..+|.++++++.
T Consensus       118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~  197 (450)
T TIGR02618       118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR  197 (450)
T ss_pred             eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence            7544 444677888666554331        22467899999999875    3346778888875 58999999999999


Q ss_pred             HHHHhcCcEEEEcccccccc--c-----CCCCcccc----cccCCCCCEEEEcccccccCCC-CceEEEEEeeCCCcchh
Q 014631          209 EKARKLGIMVISDEVYDHLT--F-----GSTPYVRM----GVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQ  276 (421)
Q Consensus       209 ~~~~~~~~~li~De~~~~~~--~-----~~~~~~~~----~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~  276 (421)
                      ++|++||+.+|.|.++....  +     .|-...++    ..+-.... .+..|..|.++.+ |   |+++.++      
T Consensus       198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD-~~~~S~~Kd~~~~~G---G~l~~~d------  267 (450)
T TIGR02618       198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD-GCTMSGKKDCLVNIG---GFLCMND------  267 (450)
T ss_pred             HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc-EEEEeeccCCCCCCc---eEEEeCC------
Confidence            99999999999999987621  1     01111122    11111111 4677889997666 4   6666554      


Q ss_pred             HHHHHHHHhhhccccc------CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEE
Q 014631          277 ELRIVDSIKGYLNISS------GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV  350 (421)
Q Consensus       277 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~  350 (421)
                       +++.++++.....+.      ..+.-...++...|.+..+.   ...++-....+++.+.|.+. |+.+ ..|.+|..+
T Consensus       268 -~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~---~y~~~r~~~a~~La~~L~~~-Gvpv-~~p~ggh~V  341 (450)
T TIGR02618       268 -DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDY---EYIEHRVKQVRYLGDKLKAA-GVPI-VEPVGGHAV  341 (450)
T ss_pred             -HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHC-CCcc-cCCCCcceE
Confidence             457777766642211      11222223333334321111   22223334577788888887 8884 478888888


Q ss_pred             EEecCcc--ccc-CCCChHHHHHHHHhhcCeeEE-eCCCC-CC-----------CCeEEEEec---CCHHHHHHHHHHHH
Q 014631          351 MVKLNLS--LLE-GISDDMEFALQLAKEESVIVL-PGMAV-GM-----------KNWLRITFA---IEPSALEEGLGRIK  411 (421)
Q Consensus       351 ~~~~~~~--~~~-~~~~~~~~~~~ll~~~gv~v~-~g~~~-~~-----------~~~iRi~~~---~~~e~l~~~~~~l~  411 (421)
                      +++....  .++ .......++.+|..+.||--. -|+.. +.           -.-+|+++.   .|.+.++.+.++|.
T Consensus       342 ~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~  421 (450)
T TIGR02618       342 FLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGII  421 (450)
T ss_pred             EEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHH
Confidence            8865431  011 111356788888888888543 23321 11           146999998   68899999999998


Q ss_pred             HHHHH
Q 014631          412 AFCQR  416 (421)
Q Consensus       412 ~~~~~  416 (421)
                      .+.++
T Consensus       422 ~~~~~  426 (450)
T TIGR02618       422 KLYKH  426 (450)
T ss_pred             HHHhh
Confidence            88755

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.84  E-value=6.7e-18  Score=162.29  Aligned_cols=342  Identities=14%  Similarity=0.099  Sum_probs=204.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..+|||..|...... ...+|.+.+++.+++++..  .+...   .+.+..+++.+.+..+   ..+.+.++++|++|
T Consensus        97 dG~~yiD~~~g~g~~~l-Gh~~p~v~~av~~ql~~~~--~~~~~---~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA  167 (474)
T PLN02482         97 DGNEYIDYVGSWGPAII-GHADDEVLAALAETMKKGT--SFGAP---CLLENVLAEMVIDAVP---SVEMVRFVNSGTEA  167 (474)
T ss_pred             CCCEEEEeccccccccc-CCCCHHHHHHHHHHHhhCC--CCCCC---CHHHHHHHHHHHHhCC---CCCEEEEeCChHHH
Confidence            47888999777543322 3578999999999998753  23221   2555566666655443   24799999999999


Q ss_pred             HHHHHHHhcC-CC-CeEEEcCCCCcchHHHH-hhc--Ccee------EeeeccCC-----CCccCCHHHHHhhhcc--Cc
Q 014631          122 IQVILTVLAR-PG-ANILLPKPGFPLYEANA-RHT--RLEI------RHFDLLPE-----KGWEVDLDGLEALADE--NT  183 (421)
Q Consensus       122 l~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~-~~~--g~~~------~~~~~~~~-----~~~~~d~e~l~~~~~~--~~  183 (421)
                      +..+++.... .| ++|+....+|+++.... ...  +...      ..++....     -.++ |++.+++.+..  +.
T Consensus       168 ~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~~~~~  246 (474)
T PLN02482        168 CMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-DLEAVKKLFEANKGE  246 (474)
T ss_pred             HHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-ChHHHHHHHHhCCCc
Confidence            9999986531 23 68888899999975321 111  0000      00000000     0111 67888887743  33


Q ss_pred             eEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631          184 VAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW  261 (421)
Q Consensus       184 ~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  261 (421)
                      .+.++..| ....|.+. +++.++++.++|++||+++|+||++.++ +.|... ....++...++   .+++|.++ .|+
T Consensus       247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~g-a~~~~gv~PDi---~t~gK~lg-gG~  320 (474)
T PLN02482        247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGG-AQEYFGITPDL---TTLGKVIG-GGL  320 (474)
T ss_pred             eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcch-HhHHhCCCCCE---EEecchhh-CCC
Confidence            45566777 55677665 4688999999999999999999999887 444322 22223322223   37899965 789


Q ss_pred             eEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--
Q 014631          262 RLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--  335 (421)
Q Consensus       262 r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--  335 (421)
                      ++|.++++        +++++.+....    ..+.+.+++..+++.++|+...+   ++..++++++.+++.+.|.++  
T Consensus       321 Pigav~g~--------~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~  389 (474)
T PLN02482        321 PVGAYGGR--------REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGK  389 (474)
T ss_pred             ceEEEEEc--------HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999875        46777765321    12445788888888888875322   123444444455555555432  


Q ss_pred             -CCccccCCCCceeEEEEecCccccc---C--CCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631          336 -PCITCPRKPEGSMFVMVKLNLSLLE---G--ISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG  406 (421)
Q Consensus       336 -~g~~~~~~~~~~~~~~~~~~~~~~~---~--~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~  406 (421)
                       -++.+.....++++ .+.+......   +  ..+   ...+... +.++||++.|....   .+ -+++.++++||+++
T Consensus       390 ~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~-l~~~Gv~~~~~~~~---~~-~psl~ht~~dId~~  463 (474)
T PLN02482        390 KAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRG-MLEEGVYLAPSQFE---AG-FTSLAHTEEDIDFT  463 (474)
T ss_pred             hcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHH-HHHCCeEEeccCCC---CC-cCCCCCCHHHHHHH
Confidence             02221112223433 2333211000   0  001   1244444 45689999874321   11 14556899999999


Q ss_pred             HHHHHHHHHH
Q 014631          407 LGRIKAFCQR  416 (421)
Q Consensus       407 ~~~l~~~~~~  416 (421)
                      ++++.+++.+
T Consensus       464 l~al~~~l~~  473 (474)
T PLN02482        464 IAAAERVLAR  473 (474)
T ss_pred             HHHHHHHHHh
Confidence            9999999875

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.84  E-value=6e-18  Score=161.86  Aligned_cols=341  Identities=14%  Similarity=0.128  Sum_probs=209.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|++++||..|......+ ..+|.+.+++.+++++..........  .+....+++.+.+..+  ..-+.++++++|++
T Consensus        42 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~--~~~~~v~f~~sGse  116 (427)
T TIGR00508        42 DDGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFT--HKPAIELCQKLVKMTP--NALDCVFLADSGSV  116 (427)
T ss_pred             CCCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccC--CHHHHHHHHHHHhhCC--CCCCEEEEeCCcHH
Confidence            3488999998875443333 67899999999998873211111111  1223334444433222  22368999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cce-------------eEeeeccCCCCcc-----CCHH
Q 014631          121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RLE-------------IRHFDLLPEKGWE-----VDLD  173 (421)
Q Consensus       121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~d~e  173 (421)
                      |+..+++....       +| .+|+....+|++....+... +..             ...++. +...+.     -|++
T Consensus       117 A~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~  195 (427)
T TIGR00508       117 AVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAIT  195 (427)
T ss_pred             HHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHHH
Confidence            99999876431       23 67999999999875444332 211             011111 101110     1456


Q ss_pred             HHHhhhcc--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          174 GLEALADE--NTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       174 ~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      ++++.+..  +..+.+++.|  +.-.|.. .+.+.+++|.++|++||+++|+||++.++++.|..+.. ..++....++ 
T Consensus       196 ~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pDi~-  273 (427)
T TIGR00508       196 PLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPDIL-  273 (427)
T ss_pred             HHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCCEE-
Confidence            66666532  2345566666  5555654 57899999999999999999999999887766654322 1222222233 


Q ss_pred             EcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhh------cccccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          249 LGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGY------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       249 ~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                        +++|.+ .+|+ .++.++++        +++++.+...      ...+...+++..+++.++|+...+.   +..++.
T Consensus       274 --~~gK~l-~gG~~p~~a~~~~--------~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~---~~~~~~  339 (427)
T TIGR00508       274 --CVGKAL-TGGYMTLSATVTT--------DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEG---EWQKQV  339 (427)
T ss_pred             --Eechhh-hcCcccceEEEEc--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHH
Confidence              479997 5674 78888874        3566766542      1123356788888888888642221   234566


Q ss_pred             HHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-
Q 014631          322 RDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-  397 (421)
Q Consensus       322 ~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-  397 (421)
                      +++.+++.+.|+++   +.+..+  ...|.+..+.+...     .....+... +.++||.+.+..     ..+|++++ 
T Consensus       340 ~~~~~~l~~~L~~l~~~~~i~~v--rg~G~~~~i~~~~~-----~~~~~~~~~-l~~~Gv~~~~~~-----~~l~~~ppl  406 (427)
T TIGR00508       340 SAIENQLKRELSPLRKNPVVKDV--RVLGAIGVVEMYKP-----VNVEELQKK-FVEQGVWIRPFG-----KLIYVMPPY  406 (427)
T ss_pred             HHHHHHHHHHHHHhhcCCCEEeE--eccccEEEEEECCc-----cCHHHHHHH-HHHCCeEEEecC-----CEEEEECCC
Confidence            66666677766654   222101  11255666666431     124455555 467799997642     47999887 


Q ss_pred             -CCHHHHHHHHHHHHHHHHH
Q 014631          398 -IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~~~  416 (421)
                       +++++|++++++|.+++++
T Consensus       407 ~~t~~~id~~~~~l~~~l~~  426 (427)
T TIGR00508       407 IITTEQLQKLTAALIEALHE  426 (427)
T ss_pred             CCCHHHHHHHHHHHHHHHhc
Confidence             8999999999999999864

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.84  E-value=5e-18  Score=161.85  Aligned_cols=348  Identities=13%  Similarity=0.062  Sum_probs=205.0

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++|+..|...... ...+|.+.+++.+++.+..  .+...   .+.+..+++.+.+..+  ...+.++++++|++
T Consensus        50 ~dG~~yiD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~---~~~~~~la~~L~~~~~--~~~~~v~f~~SGsE  121 (433)
T PRK00615         50 SLGKTFIDFCGSWGSLIH-GHSHPKICDAIQQGAERGT--SYGLT---SEQEILFAEELFSYLG--LEDHKIRFVSSGTE  121 (433)
T ss_pred             CCCCEEEEcccchhcccc-CCCCHHHHHHHHHHHHhCC--CCCCC---CHHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence            358899999887544322 3578999999999998743  22111   2333444444444332  22368999999999


Q ss_pred             HHHHHHHHhc-CCC-CeEEEcCCCCcchHH---HHhhcCcee-----EeeeccCC-C-----CccCCHHHHHhhhcc--C
Q 014631          121 AIQVILTVLA-RPG-ANILLPKPGFPLYEA---NARHTRLEI-----RHFDLLPE-K-----GWEVDLDGLEALADE--N  182 (421)
Q Consensus       121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~---~~~~~g~~~-----~~~~~~~~-~-----~~~~d~e~l~~~~~~--~  182 (421)
                      |+..+++... ..| .+|+....+|+++..   .+...+...     ......+. .     .+ -|++++++.+..  +
T Consensus       122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~  200 (433)
T PRK00615        122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNSLGH  200 (433)
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHhcCC
Confidence            9999998653 234 578888999998641   121111100     00000000 0     01 167788877642  2


Q ss_pred             ceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC
Q 014631          183 TVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG  260 (421)
Q Consensus       183 ~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  260 (421)
                      ..+.+++.| ....|... +++.+++|.++|++||+++|+||++.++ +.|... ....++....++   +++|.++ .|
T Consensus       201 ~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~g-a~~~~gv~PDi~---~~gK~lg-gG  274 (433)
T PRK00615        201 RVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGG-AAAIYHVKPDIT---VYGKILG-GG  274 (433)
T ss_pred             ceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhH-HHHhcCCCCCeE---EEccccc-CC
Confidence            334556666 55567654 5678999999999999999999999877 444322 222222222233   5899964 56


Q ss_pred             ceEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          261 WRLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+++++        +++++.+....    ..+.+.+++..+++.++|+...+ ...++..+.-...++.+.+.+.+.
T Consensus       275 ~p~~av~~~--------~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~  346 (433)
T PRK00615        275 LPAAAVVAH--------KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQ  346 (433)
T ss_pred             cceeeeeec--------HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHc
Confidence            889999985        36777664321    12345688888888888875332 223333333333333334444432


Q ss_pred             CCccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGL  407 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~  407 (421)
                       ++.+.... .|.++.+.+......        .......+...+ .++||++.|.....   + =+|..+++++|++++
T Consensus       347 -g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~---~-~ls~~ht~~did~~~  419 (433)
T PRK00615        347 -GFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSA-FSKGVYLSPSPFEA---S-FLSSAHSMENLDYAQ  419 (433)
T ss_pred             -CCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHH-HHCCeeecCccccc---c-ceecCCCHHHHHHHH
Confidence             33211112 455666666432100        000012445444 56799998754211   1 356668999999999


Q ss_pred             HHHHHHHHHhh
Q 014631          408 GRIKAFCQRHA  418 (421)
Q Consensus       408 ~~l~~~~~~~~  418 (421)
                      +++.+++++.-
T Consensus       420 ~a~~~~~~~~~  430 (433)
T PRK00615        420 NVLIDSLEKVF  430 (433)
T ss_pred             HHHHHHHHHHh
Confidence            99999998753

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.83  E-value=3.1e-17  Score=146.22  Aligned_cols=339  Identities=17%  Similarity=0.136  Sum_probs=231.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      .++.|+|=...     | -..+.+.+++-..+.+...      ..|+.+.-..+++....+..++.||  ++-.++--.+
T Consensus        25 q~~~ieLIASE-----N-~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPhS   96 (413)
T COG0112          25 QREHIELIASE-----N-FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPHS   96 (413)
T ss_pred             Hhhceeeeecc-----c-cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCCC
Confidence            34666764332     1 3567888888777765221      2455666678888888888888887  3445555544


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcC--ceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTR--LEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g--~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~  190 (421)
                       |++|+..++.+|++|||+|+..+-.+.++....   ...|  .+.+.+++++++ ..+|.|++++...+ ++|.|+.-.
T Consensus        97 -Gs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et-~~IDyD~~~k~a~e~kPK~ii~G~  174 (413)
T COG0112          97 -GSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPET-GLIDYDEVEKLAKEVKPKLIIAGG  174 (413)
T ss_pred             -chHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccccccc-CccCHHHHHHHHHHhCCCEEEECc
Confidence             566888888899999999999887776653322   1222  456677776543 46999999996654 667665322


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc-ccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD-HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      -..|-  .   -+++++.++|.+-|.++++|.+|. ++.-+|..+.|+...+     ++.+|.||+  ++|.|-|.+++.
T Consensus       175 SaY~r--~---id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~Ad-----vVTtTTHKT--lrGPrGG~Il~~  242 (413)
T COG0112         175 SAYSR--P---IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHAD-----VVTTTTHKT--LRGPRGGIILTN  242 (413)
T ss_pred             ccccc--c---cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccc-----eEeCCcccC--CCCCCceEEEec
Confidence            22221  2   458999999999999999999994 4555555554544422     788999999  478889999986


Q ss_pred             CCCcchhHHHHHHHHhhhcccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631          270 DPSGILQELRIVDSIKGYLNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS  347 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~  347 (421)
                      +       .++.+++.......  ++|.....++.+-++....+..+++.+++.-++...+.+.|.+. |++++.....+
T Consensus       243 ~-------eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdn  314 (413)
T COG0112         243 D-------EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDN  314 (413)
T ss_pred             c-------HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccc
Confidence            4       46888887765432  34444444444445554456778889999999999999999987 98866445556


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC-CC-----CCCeEEEEec------CCHHHHHHHHHHHHHHHH
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA-VG-----MKNWLRITFA------IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~~-----~~~~iRi~~~------~~~e~l~~~~~~l~~~~~  415 (421)
                      ..+.+++....     -....+..+|.+.||.+.--.. |.     .+..|||...      ..+++++++.+.|.+++.
T Consensus       315 Hl~lVDl~~~~-----~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~  389 (413)
T COG0112         315 HLVLVDLRSKG-----LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD  389 (413)
T ss_pred             eEEEEEcccCC-----CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence            66777776321     1345567788999999864322 22     2578999865      346899999998888876


Q ss_pred             H
Q 014631          416 R  416 (421)
Q Consensus       416 ~  416 (421)
                      .
T Consensus       390 ~  390 (413)
T COG0112         390 G  390 (413)
T ss_pred             c
Confidence            4

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.83  E-value=1.3e-17  Score=143.22  Aligned_cols=296  Identities=16%  Similarity=0.144  Sum_probs=212.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc--hHHHHhhcCceeEeeeccCCC
Q 014631           89 LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL--YEANARHTRLEIRHFDLLPEK  166 (421)
Q Consensus        89 ~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~  166 (421)
                      .++++-+..-++     ..++.-.++..+|+.+++.++-.++.|||+|++...+-.+  +...++..|+++.+++.+.  
T Consensus        53 ~~v~egikyVFk-----T~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~--  125 (385)
T KOG2862|consen   53 DEVLEGIKYVFK-----TANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADI--  125 (385)
T ss_pred             HHHHHHHHHHhc-----cCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCc--
Confidence            344444444442     2345566777889999999999999999999998766554  3677889999999997654  


Q ss_pred             CccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHH-HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          167 GWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQ-LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       167 ~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                      +....+|++.+.+.+ +++++++++....||+.   ++ +..+.++|++|+.++++|.+-+..   |.++ .+..++.  
T Consensus       126 G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~---q~~~~~~g~lc~k~~~lllVD~VaSlg---gt~F-~mDewgV--  196 (385)
T KOG2862|consen  126 GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVL---QDLLAISGELCHKHEALLLVDTVASLG---GTEF-EMDEWGV--  196 (385)
T ss_pred             ccCccHHHHHHHHHhcCCceEEEEecCcccccc---chHHHHHHHHhhcCCeEEEEechhhcC---Cccc-eehhhcc--
Confidence            345899999888765 56888999998899999   56 777889999999999999998762   3332 3333333  


Q ss_pred             CEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc------------------------cccCCchHHH
Q 014631          245 PVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN------------------------ISSGPATFVQ  299 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~  299 (421)
                       .+......|.++.| |  ++.+..++        ...++++..++                        +..+++....
T Consensus       197 -DvaytgSQKaL~aP~G--LsiisfS~--------ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~ll  265 (385)
T KOG2862|consen  197 -DVAYTGSQKALGAPAG--LSIISFSD--------KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLL  265 (385)
T ss_pred             -cEEEecchhhcCCCCC--cceeecCH--------HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHH
Confidence             25555667998764 4  44455442        23333332211                        2236677788


Q ss_pred             HHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC-CCC--ceeEEEEecCcccccCCCChHHHHHHHHhhc
Q 014631          300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR-KPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEE  376 (421)
Q Consensus       300 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  376 (421)
                      +++.++|....++++++..++.+++.++++..|+++ |++... .++  ..-...+.+|..     .|..+++..+..++
T Consensus       266 y~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~g-----vDw~dVv~~~~~~~  339 (385)
T KOG2862|consen  266 YSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYG-----VDWKDVVAYAMSHY  339 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCCC-----CCHHHHHHHHHHhc
Confidence            888889887778999999999999999999999987 665321 221  111233344432     36778888887877


Q ss_pred             CeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631          377 SVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       377 gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ++.+..|.....++.+||.+.   .+.+.++..++.|+..+++-
T Consensus       340 ~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~  383 (385)
T KOG2862|consen  340 VVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK  383 (385)
T ss_pred             CEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence            888887777777899999974   46799999999999988654

>PLN02271 serine hydroxymethyltransferase

Probab=99.83  E-value=1.9e-17  Score=156.93  Aligned_cols=346  Identities=13%  Similarity=0.033  Sum_probs=227.9

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEc
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSP--DDVYLT  115 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~--~~i~~~  115 (421)
                      ..-|+|--..      -...+.+.+++...+.+....+      |+....+.+++....+...+.|+.....  .+|...
T Consensus       148 ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~  221 (586)
T PLN02271        148 FKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY  221 (586)
T ss_pred             hcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence            4556664332      1456788888877766532222      3344455688877778777777633211  344444


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---------hhcCceeE--eeeccCCCCccCCHHHHHh-hhccCc
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---------RHTRLEIR--HFDLLPEKGWEVDLDGLEA-LADENT  183 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---------~~~g~~~~--~~~~~~~~~~~~d~e~l~~-~~~~~~  183 (421)
                       +|+.|+..++.+|++|||+|+..+..|.++....         ...|..+.  +++++++ ...+|.+++++ +...++
T Consensus       222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rP  299 (586)
T PLN02271        222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRP  299 (586)
T ss_pred             -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCC
Confidence             6778888899999999999999888777654322         33454444  4445433 34699999998 567788


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCce
Q 014631          184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++|++....||  ..   -+++++.++|+++|+++++|.+|......+... .++..     ..++.+|.+|++  .|.|
T Consensus       300 KLII~g~Sayp--r~---~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~-----aDvvt~TTHKtL--rGPr  367 (586)
T PLN02271        300 KILICGGSSYP--RE---WDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY-----CDIVTSTTHKSL--RGPR  367 (586)
T ss_pred             eEEEECchhcc--Cc---CCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC-----CcEEEeCCcccC--CCCC
Confidence            98877666777  33   347788899999999999999997755433322 22222     127888999995  5666


Q ss_pred             EEEEEeeCCCc------------chhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631          263 LGWLVTSDPSG------------ILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC  328 (421)
Q Consensus       263 ~G~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  328 (421)
                      .|.+++++...            ....+++.+++......  -+++.....++++.++.......+.+..++..++...|
T Consensus       368 GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaL  447 (586)
T PLN02271        368 GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQAL  447 (586)
T ss_pred             ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence            78888854200            00012455666555432  23444444555556666444455688889999999999


Q ss_pred             HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------
Q 014631          329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------  397 (421)
Q Consensus       329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------  397 (421)
                      .+.|.+. |+.++.....+..+++++.....     +...++..|++.||.+.--..++     .++.+||...      
T Consensus       448 A~~L~~~-G~~vv~ggTdnHlvLvDl~~~g~-----~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG  521 (586)
T PLN02271        448 ASALLRR-KCRLVTGGTDNHLLLWDLTTLGL-----TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRG  521 (586)
T ss_pred             HHHHHHC-CCeEeeCCCCcceeeecCcccCC-----CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcC
Confidence            9999887 88866556667778888764321     34566778899999885433222     2578999875      


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 014631          398 IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~~  415 (421)
                      ..++|++++.+.|.++++
T Consensus       522 ~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        522 CLESDFETIADFLLRAAQ  539 (586)
T ss_pred             CCcHHHHHHHHHHHHHHh
Confidence            356899999988888876

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.83  E-value=6.4e-17  Score=155.83  Aligned_cols=357  Identities=17%  Similarity=0.106  Sum_probs=210.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~  119 (421)
                      ..|.+++||..|.-.... ...+|.+.+++++++.+.......  ....+.+..+|+.+....+..... ..++++++|+
T Consensus        55 ~dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs  131 (459)
T PRK06931         55 VEGNQYLDCLAGAGTLAL-GHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA  131 (459)
T ss_pred             CCCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence            348899999888644333 357889999999998753211111  112355556666665433211111 2346668999


Q ss_pred             HHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCC--Ccc----CCHHHH---
Q 014631          120 QAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEK--GWE----VDLDGL---  175 (421)
Q Consensus       120 ~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~----~d~e~l---  175 (421)
                      +|+..+++...  ...++|+....+|+++...+...+.             .+..+|.+...  .++    -+.+.+   
T Consensus       132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (459)
T PRK06931        132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY  211 (459)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence            99999988653  2236899999999998655553211             11222221100  000    012222   


Q ss_pred             -Hhhhc-----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631          176 -EALAD-----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI  247 (421)
Q Consensus       176 -~~~~~-----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  247 (421)
                       ++.+.     .+..+.++..| +...|.. .|++.++++.++|++||+++|.||+++++.+.|.. .....++...+++
T Consensus       212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PDiv  290 (459)
T PRK06931        212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FAFEHAGIEPDII  290 (459)
T ss_pred             HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HHhhhcCCCCCEE
Confidence             22322     12245566677 5555665 57788999999999999999999999998777753 2333343333344


Q ss_pred             EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTA  325 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~  325 (421)
                         +++|.+ ..|+++|.+++++        + ++.+... ...+.+.|+++++++.+.|+...+ ...++..+.-...+
T Consensus       291 ---t~gK~l-~gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~  357 (459)
T PRK06931        291 ---VMSKAV-GGGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLK  357 (459)
T ss_pred             ---Eecccc-cCCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence               568996 4679999888742        2 2433222 223557899999999888875333 22333333333333


Q ss_pred             HHHHHHhhcCCCccccCCCCceeEEEEecCccc-cc----CCC-C---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe
Q 014631          326 DICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-LE----GIS-D---DMEFALQLAKEESVIVLPGMAVGMKNWLRITF  396 (421)
Q Consensus       326 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~----~~~-~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~  396 (421)
                      +.+.+..++.|.+..+ . .-|.+..+++.... ..    ... +   ...+.. .+.++||.+.++..  ..+.+|+.+
T Consensus       358 ~~L~~l~~~~~~i~~v-r-G~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gvl~~~~~~--~~~~l~~~P  432 (459)
T PRK06931        358 AQLAELQKRYPCIGNV-R-GRGLMIGIEIVDERQPADAMGSYPADGELAAAIQK-ACFENGLLLERGGR--NGNVVRLLP  432 (459)
T ss_pred             HHHHHHHHhCCCeEeE-e-cCceEEEEEEccCcccccccccCCccHHHHHHHHH-HHHHCCcEEeecCC--CCCEEEEEC
Confidence            3444333345433322 2 23566667774321 00    000 0   123333 45678999977432  146799888


Q ss_pred             c--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          397 A--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       397 ~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +  .+++++++++++|.+++++..+
T Consensus       433 pl~it~~eid~~~~~l~~~l~~~~~  457 (459)
T PRK06931        433 PLLITQAECEEFIDRFEQALLAAVK  457 (459)
T ss_pred             CCCcCHHHHHHHHHHHHHHHHHHHh
Confidence            7  7999999999999999987654

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.82  E-value=1.1e-17  Score=149.26  Aligned_cols=348  Identities=16%  Similarity=0.181  Sum_probs=222.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..+.++||+..+.....++ +..|++.+++.+++.+-  ....|...+ .-++.+.+.+.+.+     -..++|+|+++|
T Consensus        53 ~~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsG  125 (433)
T KOG1401|consen   53 PDGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSG  125 (433)
T ss_pred             CCcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCC
Confidence            3588999999886443343 56899999999998863  233333332 24566666666543     378999999999


Q ss_pred             HHHHHHHHHHhcC------CCC--eEEEcCCCCcchHHHHhh-cCceeEeeeccC---CC---CccCCHHHHHhhhccCc
Q 014631          119 KQAIQVILTVLAR------PGA--NILLPKPGFPLYEANARH-TRLEIRHFDLLP---EK---GWEVDLDGLEALADENT  183 (421)
Q Consensus       119 ~~al~~~~~~l~~------~gd--~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~---~~---~~~~d~e~l~~~~~~~~  183 (421)
                      |+|+..+++.-.+      +-+  +|+....+|++-...+.. .+......|.+|   +-   .+ =|+.++++.+..+.
T Consensus       126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y-nd~t~l~k~~~~h~  204 (433)
T KOG1401|consen  126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY-NDSTALEKLFESHK  204 (433)
T ss_pred             cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc-CCHHHHHHHHHhCC
Confidence            9999999977532      112  488899999875433332 233223332211   10   01 16888888886544


Q ss_pred             --eEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631          184 --VAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       184 --~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  259 (421)
                        .+.+|..| +...|.. ..++.+..|.+.|+++|+++|.||+++++.+.|... ....+....+   +.++.|.+ ..
T Consensus       205 ~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~-a~e~~~~~PD---I~t~aK~L-~g  279 (433)
T KOG1401|consen  205 GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW-AQEYFGVTPD---ITTVAKPL-GG  279 (433)
T ss_pred             CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH-HHHHhCcCCc---ceeehhhc-cC
Confidence              34456666 6667765 577889999999999999999999999988776532 2222222222   44778995 57


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhhcc----cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN----ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |+++|...+++        ++++.+.....    .+++.+++++.++...|.... .++..+..+.-+..++.+.+.+.+
T Consensus       280 GlPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~  351 (433)
T KOG1401|consen  280 GLPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKK  351 (433)
T ss_pred             CceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            79999999963        57777755432    356889999999999987643 566777777888888888888887


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe------cCCHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF------AIEPSALEEGLG  408 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~------~~~~e~l~~~~~  408 (421)
                      -+.-.+- .-..+++..+.+..+.       ..+.. ..++.+.++.++........+|+-+      .+++|.++++++
T Consensus       352 ~~~~i~g-~~grgl~ig~~~~~p~-------~~~~d-~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~  422 (433)
T KOG1401|consen  352 TPNSICG-GVGRGLVIGFEFEGPV-------YKFAD-AAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLT  422 (433)
T ss_pred             CCCceee-eeeeEEEEEEEEeech-------hhhhh-hhhhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHH
Confidence            5433211 1333555555554321       11111 1222233332222111123344433      256899999999


Q ss_pred             HHHHHHHHhh
Q 014631          409 RIKAFCQRHA  418 (421)
Q Consensus       409 ~l~~~~~~~~  418 (421)
                      .+.+.++++.
T Consensus       423 i~~~~l~~~~  432 (433)
T KOG1401|consen  423 ILEKVLSALN  432 (433)
T ss_pred             HHHHHHHHhc
Confidence            9999998865

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.82  E-value=5.9e-17  Score=149.22  Aligned_cols=222  Identities=18%  Similarity=0.165  Sum_probs=160.4

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~  161 (421)
                      +....|++.++++-        ..+..+.+++|+.|+..++..++++||+|++++..|.+....+    +..|.++.++.
T Consensus        63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d  134 (396)
T COG0626          63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD  134 (396)
T ss_pred             ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence            34578888888875        3567899999999999999999999999999999998865444    45677777664


Q ss_pred             ccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          162 LLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      .       -+.+++++.+. +++++|++-.|+||+-.+   .++.+|+++|+++|+++|+|+.+....+    +.++ .+
T Consensus       135 ~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~----q~PL-~~  199 (396)
T COG0626         135 P-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVL----QRPL-EL  199 (396)
T ss_pred             C-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccc----cChh-hc
Confidence            2       25556666666 599999999999999888   7799999999999999999999987432    1222 23


Q ss_pred             CCCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhc--ccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      +.+   |++.|.+|.++.-+-= .|.+++++       +++.+.+....  ......++.....+..-|+.     +.-+
T Consensus       200 GaD---IVvhSaTKyl~GHsDvl~G~v~~~~-------~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT-----L~~R  264 (396)
T COG0626         200 GAD---IVVHSATKYLGGHSDVLGGVVLTPN-------EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT-----LALR  264 (396)
T ss_pred             CCC---EEEEeccccccCCcceeeeEEecCh-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch-----HHHH
Confidence            333   8899999997654433 45444442       34555542222  23335566666555444443     5566


Q ss_pred             HHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631          318 VDILRDTADICYDRIKEIPCITCPRKPE  345 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~  345 (421)
                      .++..++...+.+.|++.|.+.-+++|.
T Consensus       265 m~~~~~nA~~IA~~L~~~p~V~~V~yPg  292 (396)
T COG0626         265 MERHNENALKIAEFLADHPKVKKVYYPG  292 (396)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEECCC
Confidence            7778888999999999988876555663

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.82  E-value=3.1e-17  Score=153.64  Aligned_cols=219  Identities=12%  Similarity=0.082  Sum_probs=149.4

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~  161 (421)
                      +...+|++.++++.+        .+..+.+++|+.|+.+++.+++++||+|+++.+.|.+..    ..+...|++++.++
T Consensus        64 P~~~~lE~~la~leg--------~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd  135 (384)
T PRK06434         64 PTVQAFEEKYAVLEN--------AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID  135 (384)
T ss_pred             hhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence            346789999999873        346788888889999999999999999999988776654    55567899999887


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      .++.+.+.++        .+++++|++..|+|||+.+   .++++|.++|++++  +++|.+++.. +.+   .++. .+
T Consensus       136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~-~~~---~pl~-~g  197 (384)
T PRK06434        136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASP-YNQ---NPLD-LG  197 (384)
T ss_pred             CCChhheeec--------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCc-ccC---Cchh-cC
Confidence            6532232222        1368899999999999988   67999999999998  4669997432 111   1222 22


Q ss_pred             CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      .   .+++.|.+|.++.+| .-.|.+++++       +++.+++.... ......++...+.+..-|     ..++.+.+
T Consensus       198 a---Divv~S~tK~i~G~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL-----~tL~~R~~  262 (384)
T PRK06434        198 A---DVVIHSATKYISGHSDVVMGVAGTNN-------KSIFNNLVERRKTLGSNPDPIQAYLALRGL-----KTLGLRME  262 (384)
T ss_pred             C---CEEEeecccccCCCCCceEEEEecCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCC-----CcHHHHHH
Confidence            2   288889999986644 3356665543       23545544332 222233444333333333     33677788


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCC
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKPE  345 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~~  345 (421)
                      +.+++...+.+.|+++|.+.-+.+|.
T Consensus       263 r~~~~a~~~a~~L~~~p~v~~V~yPg  288 (384)
T PRK06434        263 KHNKNGMELARFLRDSKKISNVYYPD  288 (384)
T ss_pred             HHHHHHHHHHHHHHcCCCccEEECCC
Confidence            88899999999999998875454554

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.82  E-value=5.6e-17  Score=155.63  Aligned_cols=347  Identities=15%  Similarity=0.142  Sum_probs=197.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHH--HHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAAD--AVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~--a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .|.+++|+..|.-.... ...+|.+.+  ++.+++.+-.. ..+.. .-..+....+++.+.+..+ +...+.++++++|
T Consensus        43 dG~~ylD~~~g~~~~~l-Gh~~p~v~~~~ai~~ql~~l~~-~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SG  119 (443)
T PRK08297         43 TGRRYLDMFTFFASSAL-GMNHPALADDPEFRAELGRAAL-NKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGG  119 (443)
T ss_pred             CCCEeeecccCHhhhcC-CCCChHHhhHHHHHHHHHHhhh-hccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCch
Confidence            47888998777543322 256788888  99988865210 00000 0011222333433332221 1224689999999


Q ss_pred             HHHHHHHHHHhcC--------CC------CeEEEcCCCCcchHHHHhhcCc-eeE---e--------eeccCC----CCc
Q 014631          119 KQAIQVILTVLAR--------PG------ANILLPKPGFPLYEANARHTRL-EIR---H--------FDLLPE----KGW  168 (421)
Q Consensus       119 ~~al~~~~~~l~~--------~g------d~Vl~~~p~y~~~~~~~~~~g~-~~~---~--------~~~~~~----~~~  168 (421)
                      ++|+..+++...+        .|      .+|+....+|++....+...+. ...   .        ++....    ...
T Consensus       120 sEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (443)
T PRK08297        120 ALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGE  199 (443)
T ss_pred             HHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccc
Confidence            9999999987621        12      5799999999988655543321 100   0        100000    000


Q ss_pred             c---C------CHHHHHhhhc--cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631          169 E---V------DLDGLEALAD--ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV  235 (421)
Q Consensus       169 ~---~------d~e~l~~~~~--~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  235 (421)
                      .   .      +++++++.+.  ++..+.++..| +...|.+ .|++.+++|.++|++||+++|.||+++++.+.|..+ 
T Consensus       200 ~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-  278 (443)
T PRK08297        200 DLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW-  278 (443)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH-
Confidence            0   0      2344455553  23344556666 5555654 778899999999999999999999999987776532 


Q ss_pred             cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH-HHh--hhcccccCCchHHHHHHHHHhhccch-
Q 014631          236 RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD-SIK--GYLNISSGPATFVQGAVPQIFKNTKE-  311 (421)
Q Consensus       236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~-  311 (421)
                      ....++....++   +++|.++     +|.+++.+.  +   .++.. .+.  .....+.+.++++..++.++|+...+ 
T Consensus       279 a~~~~gv~PDiv---~~gK~l~-----~~a~l~~~~--i---~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~  345 (443)
T PRK08297        279 AYQQLGVRPDIV---AFGKKTQ-----VCGIMAGRR--V---DEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEED  345 (443)
T ss_pred             HHHhcCCCCCEE---Eeccccc-----ccceecchH--H---HHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhc
Confidence            222233222333   5789853     233333210  0   01111 111  11223456788888888888875322 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCcc-ccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCC
Q 014631          312 DFFSKIVDILRDTADICYDRIKEIPCIT-CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN  390 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~  390 (421)
                      ..+++..+.-+..++.+.+...+.|.+. .+ .+. |.++.++++...     ....+...+ .++||++.|+.    ..
T Consensus       346 ~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~v-rg~-G~~~~i~~~~~~-----~~~~~~~~l-~~~Gvl~~~~~----~~  413 (443)
T PRK08297        346 GLVENAARQGEYLLARLEELAAEFPAVVSNV-RGR-GLMCAFDLPTTA-----DRDEVIRRL-WEEGVLVLPCG----ER  413 (443)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCcceee-ecc-ceEEEEEecCHH-----HHHHHHHHH-HHCCEEEecCC----CC
Confidence            2333333333333344444333444332 13 333 667777775321     133555555 57899998753    25


Q ss_pred             eEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          391 WLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       391 ~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      .+|++++  .+++++++++++|.++++++
T Consensus       414 ~lr~~P~l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        414 SIRFRPALTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             eEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            6899766  89999999999999998764

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.82  E-value=6.5e-18  Score=158.41  Aligned_cols=313  Identities=14%  Similarity=0.074  Sum_probs=197.0

Q ss_pred             CCcHHHHHHHHHHHhcCC-CCCCCC--CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEc-CCHHHHHHHHHHHhcCCCCe
Q 014631           61 RTTPVAADAVVDAVRSAE-FDCYSP--SVGILPARRAIADYLNSELPCKLS-PDDVYLT-AGCKQAIQVILTVLARPGAN  135 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~-~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~-~g~~~al~~~~~~l~~~gd~  135 (421)
                      ..++++.+++.+...... .+.+.+  ..-+.+.|+.++++++      +. +.+|+++ +|+|.+++.++..+..+ +.
T Consensus        13 ~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~   85 (361)
T TIGR01366        13 KVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFS------LPDGYEVILGNGGATAFWDAATFGLIEK-KS   85 (361)
T ss_pred             CCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhC------CCCCceEEEECCchhHHHHHHHHhcccc-cc
Confidence            567889888775311100 112221  1235677888888873      33 4478875 66999999999988643 33


Q ss_pred             EEEcCCCCcc-hHHHHhhc--CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014631          136 ILLPKPGFPL-YEANARHT--RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR  212 (421)
Q Consensus       136 Vl~~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~  212 (421)
                      +++....|.. +...+...  +.++..++.++  +..++     ..+.++++.|.+++..|.||+..|.   ++|   ++
T Consensus        86 l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi---~~I---~~  152 (361)
T TIGR01366        86 LHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVPV---RRP---EG  152 (361)
T ss_pred             cEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceeccc---ccc---cc
Confidence            3444445532 23444431  23566666532  21222     2345689999999999999999774   444   47


Q ss_pred             hcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh------
Q 014631          213 KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG------  286 (421)
Q Consensus       213 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~------  286 (421)
                      ++|+++++|.+++.    |....++...     .++++|.+|.++.+|- ++.+++++        ++.+++..      
T Consensus       153 ~~g~~~iVDavqs~----g~~~idv~~~-----D~~~~s~~K~lg~~~G-l~~~~~s~--------~~~~~~~~~~~~~~  214 (361)
T TIGR01366       153 SDDALVVIDATSGA----GGLPVDIAET-----DVYYFAPQKNFASDGG-LWLAIMSP--------AALERIEAIAASGR  214 (361)
T ss_pred             cCCCeEEEEcCccc----cCCCCCHHHC-----CEEEEEchhhcCCCCc-eEEEEECH--------HHHhhhhcccCCCC
Confidence            89999999999988    4444444432     2678899999988742 56555542        22222221      


Q ss_pred             --------------h--cccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC---c
Q 014631          287 --------------Y--LNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRKPE---G  346 (421)
Q Consensus       287 --------------~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~---~  346 (421)
                                    .  ....++++.....++.++++..... .++.+.++.+++.+++++.+.+++++..+....   .
T Consensus       215 ~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s  294 (361)
T TIGR01366       215 WVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRS  294 (361)
T ss_pred             CCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcc
Confidence                          0  0112355555555667777654434 478888999999999999999986555221111   1


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      .....+.++..     .+..++...| +++||.+.++......+.+|+|+.  ++.+++++++++|+++++++
T Consensus       295 ~~v~~v~~~~g-----~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~  361 (361)
T TIGR01366       295 QVVGTIDFVDD-----IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL  361 (361)
T ss_pred             cceEEEECCCc-----cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence            11122334321     2466666665 677999987653323568999997  89999999999999987763

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.81  E-value=5.4e-17  Score=154.46  Aligned_cols=279  Identities=18%  Similarity=0.189  Sum_probs=199.7

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC-----C---
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR-----P---  132 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~---  132 (421)
                      .+++...+++...+.+. .......++..++++.+..++.+.++.+ ....-.+|+|||+++.+.+.+..+     .   
T Consensus        73 ~~~~~a~~~~~~~~~~n-l~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~  150 (460)
T COG0076          73 RVPPVAAELLVSALNKN-LGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE  150 (460)
T ss_pred             CCHHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence            45677777787777763 2223333466899999999999988855 444568899999999977765421     1   


Q ss_pred             C------CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE--EEEeCCCCCcccccCHHHH
Q 014631          133 G------ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA--MVIVNPGNPCGNVFTYQQL  204 (421)
Q Consensus       133 g------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~--i~~~~p~nptG~~~~~~~l  204 (421)
                      +      .+|+++.-.|.++..++..+|.+...++..++ +..+|++++++++++++..  |+-+.++.+||.+   +++
T Consensus       151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi  226 (460)
T COG0076         151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDI  226 (460)
T ss_pred             ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CCH
Confidence            1      26999999999999999999999999998876 6789999999999887776  8888889999999   999


Q ss_pred             HHHHHHHHhcCcEEEEcccccccccC-CCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          205 QKIAEKARKLGIMVISDEVYDHLTFG-STPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       205 ~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++|.++|+++++++++|.+++++..- ...... ...++.-  .-+..++||. +.....+||++.++++      .+.+
T Consensus       227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~v--dSIt~d~HK~-g~aP~~~G~il~rd~e------~l~~  297 (460)
T COG0076         227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGV--DSITVDGHKY-GLAPIGCGVVLFRDEE------ALRR  297 (460)
T ss_pred             HHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCc--eEEEECcccc-cCCCCCceEEEEECHH------Hhhh
Confidence            99999999999999999999987631 111111 1111111  1334589999 6777889999998753      2333


Q ss_pred             HHhhhcc-----------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631          283 SIKGYLN-----------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM  351 (421)
Q Consensus       283 ~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~  351 (421)
                      .+.....           ..++-+.....++...|.....+++.++.++..++++++.+.|++.+.++++..|. .+.+.
T Consensus       298 ~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-l~~V~  376 (460)
T COG0076         298 ILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-LPIVA  376 (460)
T ss_pred             hhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-cceEE
Confidence            2221111           11122222333344455544568889999999999999999999986688665564 44566


Q ss_pred             EecC
Q 014631          352 VKLN  355 (421)
Q Consensus       352 ~~~~  355 (421)
                      ++.+
T Consensus       377 fr~~  380 (460)
T COG0076         377 FRLK  380 (460)
T ss_pred             EEcC
Confidence            6664

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.80  E-value=2.9e-17  Score=139.90  Aligned_cols=326  Identities=15%  Similarity=0.117  Sum_probs=208.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      ...+++|+.++   +.++..+|++.++-+++++....        .+|  ...+..|+..||++-+        .++.++
T Consensus        66 ~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGt--q~iHk~LE~kiAqfh~--------rED~il  132 (417)
T KOG1359|consen   66 DKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGT--QDIHKLLESKIAQFHG--------REDTIL  132 (417)
T ss_pred             ccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecc--hHHHHHHHHHHHHHhC--------CCceEE
Confidence            45778888776   66778899999999999886211        122  2235688888888863        567778


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh----ccCceEEEEeC
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA----DENTVAMVIVN  190 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~----~~~~~~i~~~~  190 (421)
                      .+++-.|+..++.+++.|.|.|+.+...|.++....+...   ++-        .+|+-.++..+    +.+.+ ++.+.
T Consensus       133 ypscfdANag~feail~pedAvfSDeLNhASIIdGirLck---ry~--------h~dv~~l~~~l~~a~k~r~k-lv~TD  200 (417)
T KOG1359|consen  133 YPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK---RYR--------HVDVFDLEHCLISACKMRLK-LVVTD  200 (417)
T ss_pred             eccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh---hhc--------cchhHHHHHHHHHhhhheEE-EEEec
Confidence            8888889999999999999999999999988877666543   111        13555555433    22334 34444


Q ss_pred             C-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccC-CCCceEEEEE
Q 014631          191 P-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWI-VPGWRLGWLV  267 (421)
Q Consensus       191 p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~-~~G~r~G~~~  267 (421)
                      . -..-|-+   ..+++|.+++++||.++++||+|+.+.++..+...-..++. .+..++.++++|.+| ..|   ||..
T Consensus       201 g~FSMDGdi---aPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gytt  274 (417)
T KOG1359|consen  201 GVFSMDGDI---APLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYTT  274 (417)
T ss_pred             ceeccCCCc---ccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCcc
Confidence            4 5678888   45888889999999999999999887776544333223332 233477899999976 344   9999


Q ss_pred             eeCCCcchhHHHHHHHHhhhcc--cccCCch-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          268 TSDPSGILQELRIVDSIKGYLN--ISSGPAT-FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ++.        .++.-+++...  .+++.-+ ...-.+.+++..  --.-.+...+.+.+.+++++.++.- |+. +.. 
T Consensus       275 gp~--------~li~llrqr~RpylFSnslppavV~~a~ka~dl--lm~s~~~i~~~~a~~qrfr~~me~a-Gft-Isg-  341 (417)
T KOG1359|consen  275 GPK--------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDL--LMVSSKEIQSRQANTQRFREFMEAA-GFT-ISG-  341 (417)
T ss_pred             CCh--------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHhc-Cce-ecC-
Confidence            863        35555554432  2222222 112222222221  0112344556666777777777654 777 422 


Q ss_pred             CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ..-+...+.+.+..     ....+..++|+ .|++|..-+++-.+   ..+|+.++  +++|+++++++++.++.+.++
T Consensus       342 ~~hPI~pv~lGda~-----lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~  414 (417)
T KOG1359|consen  342 ASHPICPVMLGDAR-----LASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN  414 (417)
T ss_pred             CCCCccceecccHH-----HHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence            21223333343221     24566777765 59999865554332   35888887  899999999999999887654

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.80  E-value=3.3e-17  Score=151.50  Aligned_cols=340  Identities=17%  Similarity=0.159  Sum_probs=201.8

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEE---E
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVY---L  114 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~---~  114 (421)
                      .+-|+|--..      -...+.+.+++...+.+....+      |+...-+.++++...+...+.|+.  ++++-.   =
T Consensus        20 ~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~--~~~~w~anvq   91 (399)
T PF00464_consen   20 RSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA--EPKEWYANVQ   91 (399)
T ss_dssp             HHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE--
T ss_pred             hcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCC--CcccceEEee
Confidence            4557775443      1355778787776665532222      333334567777777777777763  333322   2


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HH-------hhcCceeEeeeccCCCCccCCHHHHHhhhcc-Cc
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEA---NA-------RHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NT  183 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~-------~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~  183 (421)
                      ..+|+.|+..++.+|++|||+|+..+..+.++..   ..       .....+.+.++++++ ...+|.|++++.+.. ++
T Consensus        92 p~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kP  170 (399)
T PF00464_consen   92 PHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKP  170 (399)
T ss_dssp             -SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--
T ss_pred             cCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCC
Confidence            4677889999999999999999998876654422   11       123356777888754 457999999997754 66


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++|++..-.+|-     +-+++++.++|++.|.++++|.+|.. +..+|..+.|+..  .+   ++.+|.+|+  ++|.|
T Consensus       171 klIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~--AD---vvt~sThKt--l~GPr  238 (399)
T PF00464_consen  171 KLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY--AD---VVTGSTHKT--LRGPR  238 (399)
T ss_dssp             SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT--SS---EEEEESSGG--G-SSS
T ss_pred             CEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc--ce---EEEeecccc--ccccC
Confidence            766554333322     24588999999999999999999954 4455554455543  22   778899999  47888


Q ss_pred             EEEEEeeC------CCcchhHHHHHHHHhhhcccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          263 LGWLVTSD------PSGILQELRIVDSIKGYLNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       263 ~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      .|.++++.      +.....++++.+++.......  +++.....++.+.++.......+++..++.-++.+.|.+.|.+
T Consensus       239 ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~  318 (399)
T PF00464_consen  239 GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE  318 (399)
T ss_dssp             -EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999861      110000256888888775432  3344444444444555433456788899999999999999998


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------CCHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------IEPSAL  403 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------~~~e~l  403 (421)
                      . |+.++.....+..+|+++.....     +...+...|++.||.+..-..++     ....+|++..      ..++++
T Consensus       319 ~-G~~v~~ggTd~H~vlvd~~~~~~-----~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm  392 (399)
T PF00464_consen  319 R-GFKVVTGGTDNHQVLVDLRSFGI-----DGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDM  392 (399)
T ss_dssp             T-T-EEGGGS-SSSEEEEEGGGGTS------HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHH
T ss_pred             C-CcEEEECCCCCCeEEEEeccccc-----chHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHH
Confidence            7 88866555667788888865321     34456677899999996432222     2468999975      346777


Q ss_pred             HHHHHHH
Q 014631          404 EEGLGRI  410 (421)
Q Consensus       404 ~~~~~~l  410 (421)
                      +++.+.|
T Consensus       393 ~~iA~~I  399 (399)
T PF00464_consen  393 KEIAELI  399 (399)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhhC
Confidence            7766543

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=2.8e-18  Score=154.33  Aligned_cols=319  Identities=13%  Similarity=0.118  Sum_probs=212.8

Q ss_pred             CCCcHHHHHHHHHHHhc-C-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           60 FRTTPVAADAVVDAVRS-A-EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      .+..+.+.+++...-.. . .-..-+...-+.++++.+|+|++       .++.++|..| -..+...+.+|+.||.-|+
T Consensus       154 g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIi  225 (519)
T KOG1357|consen  154 GPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLLGKGSLII  225 (519)
T ss_pred             CcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceeecCCccee
Confidence            46677777777665322 1 11122223345788888888884       3777888777 4445555778889999999


Q ss_pred             EcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------C-----ceEEEEeCC-CCCcccccCHHHH
Q 014631          138 LPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-------N-----TVAMVIVNP-GNPCGNVFTYQQL  204 (421)
Q Consensus       138 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-------~-----~~~i~~~~p-~nptG~~~~~~~l  204 (421)
                      ..+..|.+....++..|+.++.+.++       |.+.||+.+++       +     .+++++... ...-|.+   ..+
T Consensus       226 SDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i---v~L  295 (519)
T KOG1357|consen  226 SDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI---VDL  295 (519)
T ss_pred             eccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---ccc
Confidence            99999999999999999999988865       44555554432       1     134444433 4477777   679


Q ss_pred             HHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          205 QKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       205 ~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      .+++.+++++..+++.||+|+....+  |.....+...++.+..|.+++|.|+|+..|   ||+.++        +++.+
T Consensus       296 p~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiags--------k~lid  364 (519)
T KOG1357|consen  296 PEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGS--------KELID  364 (519)
T ss_pred             HHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCc--------HHHHh
Confidence            99999999999999999999887654  333334445566666788999999999998   999986        35777


Q ss_pred             HHhhhcc----cccCCchHHHHHHHHH--hh-ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecC
Q 014631          283 SIKGYLN----ISSGPATFVQGAVPQI--FK-NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLN  355 (421)
Q Consensus       283 ~~~~~~~----~~~~~~~~~~~~~~~~--l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~  355 (421)
                      .+.....    .+..+++++|......  +. .......++..+++.++..+++..|.+. |+. +....++..+.+.+-
T Consensus       365 ~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfi-vyG~~dSpVvplll~  442 (519)
T KOG1357|consen  365 YLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFI-VYGNNDSPVVPLLLY  442 (519)
T ss_pred             hhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEE-EecCCCCCcceeeec
Confidence            6665542    2234555555554332  21 1124566778889999999999999987 776 445555533332222


Q ss_pred             cccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      .+     ..-..+-.++++ +++.++-..+...   ...+|+|.+  ++.|+++++++.+.+.=+
T Consensus       443 ~~-----~k~~~f~r~~l~-~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~  501 (519)
T KOG1357|consen  443 GP-----AKIVAFSREMLE-RNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD  501 (519)
T ss_pred             Cc-----ccccHHHHHHHh-cCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence            11     123344445544 4666554443332   456788886  899999999999887643

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.80  E-value=3.8e-16  Score=145.99  Aligned_cols=310  Identities=16%  Similarity=0.139  Sum_probs=200.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch-HHHHhhcCceeEe
Q 014631           81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY-EANARHTRLEIRH  159 (421)
Q Consensus        81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~  159 (421)
                      .|+.+..+.+|++.++++++        .+.++.+++|+.|+++++...++|||.|  +...|... .......|+.++.
T Consensus        73 ~Yagd~s~~~LE~~vAe~lG--------~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD  142 (460)
T PRK13237         73 AYAGSRNFYHLEETVQEYYG--------FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD  142 (460)
T ss_pred             hhcCCCcHHHHHHHHHHHHC--------CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence            58878888999999999984        3569999999999999876678999965  44444433 3436777775444


Q ss_pred             eecc--------CCCCccCCHHHHHhhhccC----ceEEEEeCCCCCc-ccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631          160 FDLL--------PEKGWEVDLDGLEALADEN----TVAMVIVNPGNPC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDH  226 (421)
Q Consensus       160 ~~~~--------~~~~~~~d~e~l~~~~~~~----~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~  226 (421)
                      +..+        ....+.+|++++++.++++    +..+.+..++|.. |...|.++++++.++|++||+.+|.|.++..
T Consensus       143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~  222 (460)
T PRK13237        143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV  222 (460)
T ss_pred             eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence            4211        1234679999999988653    2346677788877 7999999999999999999999999999875


Q ss_pred             cc----------cCCCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc----
Q 014631          227 LT----------FGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS----  291 (421)
Q Consensus       227 ~~----------~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~----  291 (421)
                      ..          +.+..... +..+.... .....|++|.++.+-  .|++++++       +++.++++.....+    
T Consensus       223 gna~fI~~re~~y~~~~i~ei~~e~~s~a-D~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~~~~eG~~  292 (460)
T PRK13237        223 ENAYFIKEREEGYQDKSIKEIVHEMFSYA-DGCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELVVVYEGMP  292 (460)
T ss_pred             cChhhhcccccccCCCcHhHHhhhccCcC-cEEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhccccCCCc
Confidence            31          11211100 01111111 255668999976652  38888765       46778877764221    


Q ss_pred             --cCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc--ccc-CCCCh
Q 014631          292 --SGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS--LLE-GISDD  365 (421)
Q Consensus       292 --~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~  365 (421)
                        ++.+.-...+++..|.+.. ..++..+.    ...+++.+.|.+. |+. +..|.+|.-++++....  .++ .....
T Consensus       293 tygg~~grd~~alAvgl~E~~~~~y~~~ri----~~~~~l~~~L~~~-Gvp-v~~p~ggH~v~vda~~~lph~~~~~~p~  366 (460)
T PRK13237        293 SYGGMAGRDMEAMAIGIEESVQYEYIEHRV----GQVRYLGEKLLAA-GVP-IVEPVGGHAVFLDARRFLPHLPQDQFPA  366 (460)
T ss_pred             CCCChhhhHHHHHHhHHHhhchHHHHHHHH----HHHHHHHHHHHHC-CCc-eecCCCceEEEEEhHHhCCCCCcccChH
Confidence              1221212333333343222 33333333    4556777777766 888 44788888887754321  001 11136


Q ss_pred             HHHHHHHHhhcCeeEE-eCCCC-CC-----------CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631          366 MEFALQLAKEESVIVL-PGMAV-GM-----------KNWLRITFA---IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       366 ~~~~~~ll~~~gv~v~-~g~~~-~~-----------~~~iRi~~~---~~~e~l~~~~~~l~~~~~~  416 (421)
                      ..++.+|..+.||--. -|+.. +.           -.-+|+++.   .|.+.++.+.++|..+.++
T Consensus       367 ~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~  433 (460)
T PRK13237        367 QALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH  433 (460)
T ss_pred             HHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence            6788888888888543 23221 11           156999998   6889999999999888755

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.80  E-value=1.7e-16  Score=152.20  Aligned_cols=344  Identities=15%  Similarity=0.151  Sum_probs=194.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHH--HHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAA--DAVVDAVRSAEFDCYSP-SVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~--~a~~~~~~~~~~~~y~~-~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .|..++||..|......+ ..+|.+.  +++.+++.+........ ....+.+.+ +++.+.+..+ +...+.++++++|
T Consensus        36 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~~~-~~~~~~v~f~~sG  112 (431)
T TIGR03251        36 DGRRYLDMFSFFASMALG-MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMAR-FVDTFARVLG-DPALPHLFFIEGG  112 (431)
T ss_pred             CCCChhhcccChhhcCCC-CCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHH-HHHHHHHhcC-CCCcCEEEEeCCc
Confidence            478888887775443333 5678888  89988887632101111 111233333 3333322111 1134689999999


Q ss_pred             HHHHHHHHHHhcC--------C------CCeEEEcCCCCcchHHHHhhc-Cce-eE--eeec-------cC-------CC
Q 014631          119 KQAIQVILTVLAR--------P------GANILLPKPGFPLYEANARHT-RLE-IR--HFDL-------LP-------EK  166 (421)
Q Consensus       119 ~~al~~~~~~l~~--------~------gd~Vl~~~p~y~~~~~~~~~~-g~~-~~--~~~~-------~~-------~~  166 (421)
                      ++|+..+++....        .      +.+|+....+|++....+... |.. ..  ..|.       .+       ..
T Consensus       113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  192 (431)
T TIGR03251       113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP  192 (431)
T ss_pred             HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence            9999999886531        1      367999999999876554432 211 00  0110       00       00


Q ss_pred             Ccc-------CCHHHHHhhhc--cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631          167 GWE-------VDLDGLEALAD--ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV  235 (421)
Q Consensus       167 ~~~-------~d~e~l~~~~~--~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  235 (421)
                      ...       -+++++++.+.  ++..+.++..| +...|.. .+++.+++|.++|++||+++|+||+++++.+.|..+ 
T Consensus       193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-  271 (431)
T TIGR03251       193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW-  271 (431)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH-
Confidence            000       12344444543  22334445555 6667765 677889999999999999999999999887766432 


Q ss_pred             cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH-Hh-h-hcccccCCchHHHHHHHHHhhccch-
Q 014631          236 RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS-IK-G-YLNISSGPATFVQGAVPQIFKNTKE-  311 (421)
Q Consensus       236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~-  311 (421)
                      ....++...+++   +++|.+  +.  .|++...+   +   .++... +. . ....+.+.+++..+++.++|+...+ 
T Consensus       272 a~~~~gv~PDi~---~~gK~~--~~--~g~~~~~~---i---~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~  338 (431)
T TIGR03251       272 AYQQLGVQPDIV---AFGKKT--QV--CGIMAGRR---V---DEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEE  338 (431)
T ss_pred             HHHhcCCCCCEE---EecccC--cc--ceEEecch---H---HHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence            222233222333   478984  22  35554321   0   012211 11 0 1123456788888888888875332 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631          312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW  391 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  391 (421)
                      ...++..+.-+..++.+.+..++.+++...... .|.+..++++...     ....+...+ .++||.+.|..    ...
T Consensus       339 ~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg-~G~~~~i~~~~~~-----~~~~~~~~l-~~~Gvl~~~~g----~~~  407 (431)
T TIGR03251       339 RLVDNARVQGAHLLARLHELAAEFPHLVSNPRG-RGLMCAFDLPSTA-----DRDEVIRQL-YREGVLLLGCG----ERS  407 (431)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCccceecccc-cceeEEEEeCCHH-----HHHHHHHHH-HhCCeEEecCC----CCe
Confidence            223444444444555555444445423211122 3666677775321     123455554 57899997743    256


Q ss_pred             EEEEec--CCHHHHHHHHHHHHHH
Q 014631          392 LRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      +|++++  ++++++++++++|.++
T Consensus       408 lr~~P~l~~t~~eid~~l~~l~~~  431 (431)
T TIGR03251       408 IRFRPPLTVTREEIDAAIDAIRRV  431 (431)
T ss_pred             EEEECCccCCHHHHHHHHHHHHhC
Confidence            898887  7999999999998763

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.79  E-value=1.8e-16  Score=133.68  Aligned_cols=336  Identities=14%  Similarity=0.164  Sum_probs=220.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP--------SVGILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      .+..||++   |-+.. ...+++..+++.+.-+..+.++|..        .+-+..+.+.+++|++        -+.+-+
T Consensus        14 ~r~~iNv~---PiQrG-GiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg--------~D~~R~   81 (382)
T COG1103          14 TRGFINVN---PIQRG-GILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLG--------MDEVRV   81 (382)
T ss_pred             hcCccccC---hhhcc-CcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhC--------Cceeee
Confidence            35666664   32222 3567888888888766544455542        1225667777888873        577899


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----c---CceEEE
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----E---NTVAMV  187 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~---~~~~i~  187 (421)
                      |+|+.++=+++..+++++||.|++...+|++..-++...|.++..+|......+.+++|...+.+.    +   .+.+.+
T Consensus        82 t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lal  161 (382)
T COG1103          82 TAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALAL  161 (382)
T ss_pred             cccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEE
Confidence            999999999999999999999999999999999999999999999996555567888887766553    2   356678


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +++|....|..   .+-++++++|+++|+.++...+|+.    |..+.+....+.+   ++++|-+|++ .+.-++|.+.
T Consensus       162 lTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsm-AAs~PiGvl~  230 (382)
T COG1103         162 LTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSM-AASAPIGVLA  230 (382)
T ss_pred             EeccCCCcCCc---hhhHHHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccch-hccCCeeEEe
Confidence            99998888888   7899999999999999999999988    5555555555554   8899999994 5666799998


Q ss_pred             eeCCCcchhHHHHHHHHhhhc---------ccccCCchHHHHHHHHHhhccchhHHHHHHHH---HHHHHHHHHHHhhcC
Q 014631          268 TSDPSGILQELRIVDSIKGYL---------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDI---LRDTADICYDRIKEI  335 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~  335 (421)
                      .+.        ++.+..-+..         ...++. ....- +...|.+  -.+..++.++   --++.+++.+.|+++
T Consensus       231 ~~e--------E~ae~V~r~Sg~~~~~KEvellGCT-~rGap-ivTlmAS--fP~V~eRVkrWdeEv~kaR~fv~elEki  298 (382)
T COG1103         231 MSE--------EWAEIVLRRSGRAFPKKEVELLGCT-VRGAP-IVTLMAS--FPHVVERVKRWDEEVEKARWFVAELEKI  298 (382)
T ss_pred             ehh--------HHHHHHHhhcccccccceeeeeccc-ccCch-HHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            863        3333321111         011111 11100 1111211  1122222221   225667888888888


Q ss_pred             CCcccc-CCCCceeEEEEecCccc--ccCCCChHHHHHHHHhhcCee-EEeCCCCCCCCeEEEEe-cCCHHHHHHHHHHH
Q 014631          336 PCITCP-RKPEGSMFVMVKLNLSL--LEGISDDMEFALQLAKEESVI-VLPGMAVGMKNWLRITF-AIEPSALEEGLGRI  410 (421)
Q Consensus       336 ~g~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~-v~~g~~~~~~~~iRi~~-~~~~e~l~~~~~~l  410 (421)
                      .|+... ..|..--.+.++.|...  ........-|+.+-|+++||. +.||    ...++.+|. +.+.|+++..++++
T Consensus       299 gg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G----~Tk~~K~svyGl~~Eqve~V~~af  374 (382)
T COG1103         299 GGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPG----QTKYFKLSVYGLSWEQVEYVVDAF  374 (382)
T ss_pred             hhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccC----ceeEEEEEeecCCHHHHHHHHHHH
Confidence            556522 13433223333333210  000001112344445777774 3444    357899987 59999999999999


Q ss_pred             HHHHHHh
Q 014631          411 KAFCQRH  417 (421)
Q Consensus       411 ~~~~~~~  417 (421)
                      +++++++
T Consensus       375 keI~eky  381 (382)
T COG1103         375 KEIAEKY  381 (382)
T ss_pred             HHHHHhc
Confidence            9998875

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.79  E-value=9.5e-17  Score=138.90  Aligned_cols=339  Identities=17%  Similarity=0.185  Sum_probs=220.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC---CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD---CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      |..++||-.+-..++ ....+|.+.++++++.++-.++   .|..-  +.++.+.+++++    |    -+.++-++.|.
T Consensus        58 Gk~ylDflsaysaVn-qGhchpki~~aLqeq~~kLtlssrafYnd~--~~~f~~~vt~lf----~----~~kvlpmnTGa  126 (427)
T KOG1402|consen   58 GKEYLDFLSAYSAVN-QGHCHPKIIKALQEQADKLTLSSRAFYNDV--LGEFAEYVTKLF----G----YDKVLPMNTGA  126 (427)
T ss_pred             ccchhhhhhhhhhcc-cCCCCHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHHHHHHhc----C----cceeeecccch
Confidence            778888876654433 2468999999999998863221   23222  346666666654    3    45677788889


Q ss_pred             HHHHHHHHHhc------C--CCC--eEEEcCCCCcchHHHHhhcCceeEe----eeccCC----CCccCCHHHHHhhhcc
Q 014631          120 QAIQVILTVLA------R--PGA--NILLPKPGFPLYEANARHTRLEIRH----FDLLPE----KGWEVDLDGLEALADE  181 (421)
Q Consensus       120 ~al~~~~~~l~------~--~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~----~~~~~d~e~l~~~~~~  181 (421)
                      ||.+.++....      +  |.+  +|+....+|++-.-.+-+++.+...    =|.-|.    -.++ |.|+++..++.
T Consensus       127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-d~eale~~l~~  205 (427)
T KOG1402|consen  127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-DAEALEVALKS  205 (427)
T ss_pred             hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-CHHHHHHHhcC
Confidence            99998887653      1  322  4555566666533222222222100    000010    0111 78999998877


Q ss_pred             CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631          182 NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       182 ~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  259 (421)
                      ...+.++..| +...|++. |+..+++..++|++||+++|.||++.+..++|.-. ....-.....+++   |.|.++.+
T Consensus       206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l-a~d~env~PDivi---lgKalSGG  281 (427)
T KOG1402|consen  206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL-ACDYENVRPDIVI---LGKALSGG  281 (427)
T ss_pred             CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE-EeehhhcCCCeEE---EeccccCC
Confidence            6666678888 78899875 55779999999999999999999999999887632 2111111223443   46997555


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC---
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI---  335 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---  335 (421)
                      =++++.++++        .+++..++.... .+.+.|++..+++.++|+...+   ++..++.+.+-+.++..|.++   
T Consensus       282 ~~Pvsavl~~--------~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~~  350 (427)
T KOG1402|consen  282 VYPVSAVLAD--------DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQKK  350 (427)
T ss_pred             eeeeEEEEec--------HHHHhccCCCccccccCCChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcccc
Confidence            5688888875        367766666543 3568899999999998875333   344555666667777777765   


Q ss_pred             -CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          336 -PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       336 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                       |++... ....|++..+.+......+ .+..+++.. +++.|++--|.+    .+.||+.+.  .+++|+++.++.|+.
T Consensus       351 ~p~~v~~-VRGrGl~~ai~i~~~~~~~-~~aw~~cl~-lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k  423 (427)
T KOG1402|consen  351 FPHVVKE-VRGRGLLNAIVINPSKTSG-QDAWDVCLA-LKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEK  423 (427)
T ss_pred             ccchhhe-eeccceEEEEEeccccccc-hhHHHHHHc-ccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHH
Confidence             343312 2334677777776433221 245566654 488899888765    468999987  789999999999998


Q ss_pred             HHH
Q 014631          413 FCQ  415 (421)
Q Consensus       413 ~~~  415 (421)
                      ++.
T Consensus       424 ~i~  426 (427)
T KOG1402|consen  424 TIA  426 (427)
T ss_pred             Hhc
Confidence            763

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.79  E-value=6e-18  Score=141.99  Aligned_cols=166  Identities=16%  Similarity=0.112  Sum_probs=129.2

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH-HHHhhcCceeEeeeccCCC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-ANARHTRLEIRHFDLLPEK  166 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~~~~~~~~  166 (421)
                      +.++++.++++++      .+.+++++++|+++++.+++.++.+++++|+++.+.|++.. ..+...|.++..++.+...
T Consensus         2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~   75 (170)
T cd01494           2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG   75 (170)
T ss_pred             HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCC
Confidence            3678899999873      45788999999999999999999888999999999999988 8888899999998876543


Q ss_pred             CccCCHHHHHhhh-ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC
Q 014631          167 GWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP  245 (421)
Q Consensus       167 ~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  245 (421)
                      ....+.+.+++.. .++++.+++++++|++|...+.   ++|.++|+++|+++|+|++|..+...... ..   ....+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~~~~~  148 (170)
T cd01494          76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG-VL---IPEGGA  148 (170)
T ss_pred             ccchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc-cc---cccccC
Confidence            3323333554433 4678888999999999998764   88888999999999999999987654322 11   111223


Q ss_pred             EEEEcccccccCCCCceEEEEEe
Q 014631          246 VITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       246 ~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      .+++.|++|.|+.  .++|++++
T Consensus       149 d~~~~s~~K~~~~--~~~G~l~~  169 (170)
T cd01494         149 DVVTFSLHKNLGG--EGGGVVIV  169 (170)
T ss_pred             CEEEEEcccccCC--CceEEEEe
Confidence            4778899999765  66999886

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.79  E-value=8.9e-17  Score=153.60  Aligned_cols=343  Identities=14%  Similarity=0.079  Sum_probs=195.6

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHH-HhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDA-VRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~-~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      ..|..++|+..|...... ...+|.+.+++.++ .....  ...|.. ....++.+.+++.+....+  ...+.++++++
T Consensus        55 ~dG~~ylD~~sg~~~~~l-Gh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~p--~~~~~v~f~~S  130 (464)
T TIGR00699        55 VDGNRLLDLYSQISSIPI-GYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVAP--KGQDQVWTGMS  130 (464)
T ss_pred             CCCCEEEEccCCHhhhcC-CCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhCC--CCcCEEEEeCC
Confidence            348899999888655333 35789999999984 23211  111211 1112344444432222221  22368999999


Q ss_pred             HHHHHHHHHHHhcC--------------------------CC---CeEEEcCCCCcchHHHHhhcCc-e-----------
Q 014631          118 CKQAIQVILTVLAR--------------------------PG---ANILLPKPGFPLYEANARHTRL-E-----------  156 (421)
Q Consensus       118 ~~~al~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~~g~-~-----------  156 (421)
                      |++|+..+++....                          +|   .+|+....+|++....+..... .           
T Consensus       131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~  210 (464)
T TIGR00699       131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD  210 (464)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence            99999999986521                          11   2799999999987655443221 1           


Q ss_pred             eEeeeccCC-CCc-----------cCCHHHHHhhhcc--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEE
Q 014631          157 IRHFDLLPE-KGW-----------EVDLDGLEALADE--NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVIS  220 (421)
Q Consensus       157 ~~~~~~~~~-~~~-----------~~d~e~l~~~~~~--~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~  220 (421)
                      ...+|.+.. ..+           .-+++.+++.+..  +..+.++..| +...|... +++.++++.++|++||+++|+
T Consensus       211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~  290 (464)
T TIGR00699       211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV  290 (464)
T ss_pred             ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            011111100 000           0135556666642  2234456666 55667765 678899999999999999999


Q ss_pred             cccccccccCCCCcccccccCCC--CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchH
Q 014631          221 DEVYDHLTFGSTPYVRMGVFGST--VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATF  297 (421)
Q Consensus       221 De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  297 (421)
                      ||++.++.+.|..+ ....++..  .++   .+++|.++..|    +++..         +........ ...+.+.+++
T Consensus       291 DEV~tGfGrtG~~f-a~e~~gv~~~PDi---~t~gK~lg~gG----~~~~~---------~~~~~~~~~~~~~T~~gnp~  353 (464)
T TIGR00699       291 DEVQTGVGATGKFW-AHEHWNLDDPPDM---VTFSKKFQTAG----YFFHD---------PAFRPNKPYRQFNTWMGDPS  353 (464)
T ss_pred             eeeeeCCCCCcchh-HHHhcCCCCCCCE---EEehhhhccCC----ccccc---------hhccCCCCcccccCCCCCHH
Confidence            99999987766532 22222221  223   36789964444    33332         111111111 2235578888


Q ss_pred             HHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhh
Q 014631          298 VQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE  375 (421)
Q Consensus       298 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  375 (421)
                      +.+++.+.|+...++ ..++..+.-...++.+.+..+++| .+..+.....|+++.++++...     ....+... +.+
T Consensus       354 ~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-----~~~~i~~~-~~~  427 (464)
T TIGR00699       354 RALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-----KRDKLLKK-ARN  427 (464)
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-----HHHHHHHH-HHH
Confidence            888888787653322 223332222333333333333454 2331211134677777775321     13345544 466


Q ss_pred             cCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          376 ESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       376 ~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      +||++.+.    ..+.+|+.++  .+++++++++++|.+++
T Consensus       428 ~Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       428 NGVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             CCcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence            79999763    1378999987  79999999999998864

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.77  E-value=2.9e-16  Score=150.61  Aligned_cols=336  Identities=15%  Similarity=0.137  Sum_probs=187.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP-SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|..+|||..|.-.... ...+|.+.+++.+++++..  .+.. .....++.+.+++.+    +   ..+.++++++|+
T Consensus        45 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~--~~~~~~~~~~~la~~l~~~~----p---~~~~v~f~~sGs  114 (431)
T PRK06209         45 VDGNEYIEYGMGLRAVGL-GHAYPPVVEAVREALQDGC--NFTRPSAIELDAAESFLELI----D---GADMVKFCKNGS  114 (431)
T ss_pred             CCCCEEEEccccccchhc-CCCCHHHHHHHHHHHHhCc--CCCCCCHHHHHHHHHHHHhC----C---ccceEEEecCHH
Confidence            458899999887544332 3578899999999998743  2322 111113444444443    2   136899999999


Q ss_pred             HHHHHHHHHhc-CCC-CeEEEc-CCCCcchHHH---Hhh--cCce--e--EeeeccCCCCccCCHHHHHhhhcc--CceE
Q 014631          120 QAIQVILTVLA-RPG-ANILLP-KPGFPLYEAN---ARH--TRLE--I--RHFDLLPEKGWEVDLDGLEALADE--NTVA  185 (421)
Q Consensus       120 ~al~~~~~~l~-~~g-d~Vl~~-~p~y~~~~~~---~~~--~g~~--~--~~~~~~~~~~~~~d~e~l~~~~~~--~~~~  185 (421)
                      +|+..+++... -.| .+|+.. ..+|+++...   ...  .|..  .  ..+..    .+ -|++++++.+..  +..+
T Consensus       115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~-~d~~~l~~~l~~~~~~~a  189 (431)
T PRK06209        115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF----RY-NDIASLEALFEDHPGRIA  189 (431)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc----CC-CCHHHHHHHHHhCCCCEE
Confidence            99999998643 234 345554 3344332111   000  0110  0  00111    01 178888887742  3345


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      .+++.|.  .|...+.+.+++|.++|++||+++|+||+++++.+.+..........+  .   +.+++|.++ .|+.+|+
T Consensus       190 avi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~P--D---i~t~gK~lg-gG~p~~a  261 (431)
T PRK06209        190 CVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVP--D---LSCFGKALG-NGFAVSA  261 (431)
T ss_pred             EEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCc--c---eeeehhhhc-CCcccEE
Confidence            5666774  344677889999999999999999999999877543221111112222  2   357899975 5788999


Q ss_pred             EEeeCCCcchhHHHHHHH--Hhh---h----cccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          266 LVTSDPSGILQELRIVDS--IKG---Y----LNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~--~~~---~----~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      ++++        +++++.  +..   .    ...+.+++++..+++.++|+...+ ...++..+.-+..++.+.+...++
T Consensus       262 v~~~--------~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~  333 (431)
T PRK06209        262 LAGK--------REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEH  333 (431)
T ss_pred             EEEH--------HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9985        356554  211   1    122345677888888888765332 223333333333333343333334


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCCh--HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDD--MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                       ++.......+.+..+..+...........  ..+..+ +.++|+.+.|         ++++..+++++|++++++|.++
T Consensus       334 -~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~~~  402 (431)
T PRK06209        334 -GLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQE-TIRRGVLMPS---------LVVSYAHGDADIERTIDAVHGA  402 (431)
T ss_pred             -CCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHH-HHHCCccccc---------ccccccCCHHHHHHHHHHHHHH
Confidence             22201112222222211111000000011  134444 4567997622         4677668999999999999999


Q ss_pred             HHHhh
Q 014631          414 CQRHA  418 (421)
Q Consensus       414 ~~~~~  418 (421)
                      +++++
T Consensus       403 l~~~~  407 (431)
T PRK06209        403 LGVYR  407 (431)
T ss_pred             HHHHH
Confidence            98864

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.77  E-value=3.6e-16  Score=142.05  Aligned_cols=214  Identities=19%  Similarity=0.117  Sum_probs=152.5

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~  163 (421)
                      ...+++.+++..+        ....+++++|+.|+..++..|+.+|++|+..+..|.+....+    ...|.+...+..+
T Consensus        79 ~~~le~~iaal~g--------a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~  150 (409)
T KOG0053|consen   79 RDVLESGIAALEG--------AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD  150 (409)
T ss_pred             hHHHHHHHHHHhC--------CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh
Confidence            4688888888762        455888999999999999999999999999999999875554    4566666665432


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                             +++.+++++.+++++|++.+|.||+..+   .++++|+++|+++|+++++|+.++...     ......++.+
T Consensus       151 -------~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~-----~~~pL~lGAD  215 (409)
T KOG0053|consen  151 -------DLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPY-----NQDPLPLGAD  215 (409)
T ss_pred             -------hHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccc-----ccChhhcCCC
Confidence                   6788889999999999999999999999   779999999999999999999987742     1222234444


Q ss_pred             CCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          244 VPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                         |++.|.+|.++...-=+ |.++++.       +++.++++.... ...++++........-|+.     +.-+.++.
T Consensus       216 ---IV~hSaTKyi~Ghsdvi~G~iv~n~-------~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt-----l~lRi~~~  280 (409)
T KOG0053|consen  216 ---IVVHSATKYIGGHSDVIGGSVVLNS-------EELASRLKFLQEDLGWCEDPFDLFLLSRGLKT-----LHLRINKH  280 (409)
T ss_pred             ---EEEEeeeeeecCCcceeeeEEecCc-------HHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch-----hhhhHHHH
Confidence               89999999987654334 5555531       456666665543 3346666666554443332     23334444


Q ss_pred             HHHHHHHHHHhhcCCCcc
Q 014631          322 RDTADICYDRIKEIPCIT  339 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~  339 (421)
                      .++.-.+.+.|+..|.++
T Consensus       281 ~ena~~~A~~Le~~~~v~  298 (409)
T KOG0053|consen  281 SENALKIALLLEAHPKVK  298 (409)
T ss_pred             HHHHHHHHHHhhhCCcee
Confidence            555555666666554443

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.77  E-value=8e-16  Score=135.83  Aligned_cols=294  Identities=17%  Similarity=0.158  Sum_probs=191.1

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~  161 (421)
                      +....|++.|+.+=+        .-.-+.+.+|+.|+..++..+.++||+|+....-|.+....    ++..|.++..+.
T Consensus        62 PT~~vlE~RiAaLEG--------G~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd  133 (426)
T COG2873          62 PTTDVLEERIAALEG--------GVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD  133 (426)
T ss_pred             chHHHHHHHHHHhhc--------chhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence            345799999999752        22345677889999999999999999999999888876443    467799988875


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      .       .|+|.+++.++++||+|++..-.||.+.+   -++++|+++|+++|+++|+|...+.-.+    ..++ ..+
T Consensus       134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v---~Die~ia~iAh~~gvpliVDNT~atpyl----~rP~-~hG  198 (426)
T COG2873         134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDV---LDIEAIAEIAHRHGVPLIVDNTFATPYL----CRPI-EHG  198 (426)
T ss_pred             C-------CCHHHHHHHhCcccceEEEEeccCCCccc---cCHHHHHHHHHHcCCcEEEecCCCccee----cchh-hcC
Confidence            3       37899999999999999999999999999   5699999999999999999998865211    1122 222


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchh----HHHHHH---------------------HHhhh--cccccCC
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ----ELRIVD---------------------SIKGY--LNISSGP  294 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~~~~~---------------------~~~~~--~~~~~~~  294 (421)
                      .   .|++.|.+|+.|..|.-+|-+++......+.    +|.+.+                     +.+..  +....+.
T Consensus       199 A---DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l  275 (426)
T COG2873         199 A---DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL  275 (426)
T ss_pred             C---CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence            2   3889999999999999999888864332221    000000                     00000  0111122


Q ss_pred             chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC-----------------ceeEEEEecCcc
Q 014631          295 ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE-----------------GSMFVMVKLNLS  357 (421)
Q Consensus       295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~-----------------~~~~~~~~~~~~  357 (421)
                      +++.......-+     +-+.-+.++..++...+.+.|+++|.+..+.+|.                 .|-.+.+++...
T Consensus       276 sPfnAfl~lqGl-----ETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg  350 (426)
T COG2873         276 SPFNAFLLLQGL-----ETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG  350 (426)
T ss_pred             CcHHHHHHHhch-----hhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecCh
Confidence            222222221111     2244456778899999999999988776554442                 123444555432


Q ss_pred             cccCCCChHHHHHHH------H---hhcCeeEEeCCCCCC-------------CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          358 LLEGISDDMEFALQL------A---KEESVIVLPGMAVGM-------------KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       358 ~~~~~~~~~~~~~~l------l---~~~gv~v~~g~~~~~-------------~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      .    +....|++.+      .   .-+.+++-|.+.-+.             ++.||+|++.  |+++.+++.|+++++
T Consensus       351 ~----ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl~  424 (426)
T COG2873         351 Y----EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQALE  424 (426)
T ss_pred             H----HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHHh
Confidence            1    1223443332      0   123445556543321             5789999986  466667777777765


Q ss_pred             H
Q 014631          416 R  416 (421)
Q Consensus       416 ~  416 (421)
                      +
T Consensus       425 ~  425 (426)
T COG2873         425 A  425 (426)
T ss_pred             c
Confidence            3

>PLN02452 phosphoserine transaminase

Probab=99.77  E-value=8.1e-16  Score=143.15  Aligned_cols=328  Identities=14%  Similarity=0.136  Sum_probs=212.5

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      ..+++|+-| |.     ..|+.|++++++.+.+..        .+...+.  ..++-+.+.+.+.+.++++.+-+-+++.
T Consensus         6 ~~~~~f~pG-P~-----~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~--f~~i~~~~~~~L~~l~~~p~~y~v~~l~   77 (365)
T PLN02452          6 GRVFNFSAG-PA-----TLPANVLAKAQAELYNWEGSGMSVMEMSHRGKE--FLSIIQKAEADLRELLDIPDNYEVLFLQ   77 (365)
T ss_pred             CceEeeeCC-CC-----CCCHHHHHHHHHHHhcccccCccccccCCCchH--HHHHHHHHHHHHHHHhCCCCCceEEEEe
Confidence            346788777 33     578899999888754311        1112111  2344444444444444433222345667


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCc--cCCHHHHHhhhccCceEEEEeCC
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGW--EVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~--~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      .|+|.++..++..++.+|+++++...++++-  ...++..|...+.... +..++  .+++++++.  .++.+.+.+++.
T Consensus        78 Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~hn  154 (365)
T PLN02452         78 GGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICAN  154 (365)
T ss_pred             CccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECCC
Confidence            8899999999999999999999988777663  5667777764333321 12221  345665422  345677777777


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      ...||+.+.  +++++.      ++++|+|.+.+.    +....++..++     +...|.+|.+|.+|  +|++++++ 
T Consensus       155 ETstGv~~~--~~~~i~------~~~lvVDa~Ss~----g~~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~-  214 (365)
T PLN02452        155 ETIHGVEFK--DYPDVG------NVPLVADMSSNF----LSKPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK-  214 (365)
T ss_pred             CCCCcEecC--cccccC------CCeEEEECCccc----cCcccCHHHcC-----EEEEecccccCCCC--eEEEEEcH-
Confidence            778999643  344443      389999999987    33334444444     34469999998888  78888853 


Q ss_pred             CcchhHHHHHHHHhh-------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          272 SGILQELRIVDSIKG-------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                             ++.+++..             ......+|+....+++.++|+...+. +++.+.++.+++.+++++.|++.+|
T Consensus       215 -------~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G  287 (365)
T PLN02452        215 -------DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNG  287 (365)
T ss_pred             -------HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence                   33333221             11223588888899988888764443 7999999999999999999998777


Q ss_pred             cccc-CCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          338 ITCP-RKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       338 ~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      +... ..+.  ..+.+.+.++..     ....+|+. .++++|+...+|+.--  +.+|+|+-  .+.++++++++.+++
T Consensus       288 ~y~~~~~~~~rs~~~vsF~~~~~-----~~~~~f~~-~~~~~g~~~~~G~r~~--gg~R~s~yna~~~~~v~~L~~~m~~  359 (365)
T PLN02452        288 FYVCPVEKSVRSLMNVPFTLGGS-----ELEAEFVK-EAAKAGMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKD  359 (365)
T ss_pred             cccCCCChHHhCCeEEEEEcCCc-----hhHHHHHH-HHHHCCCcccCCcccc--CceEEECcCCCCHHHHHHHHHHHHH
Confidence            7311 1112  233455555532     13455655 4588999999987542  23999984  789999999999998


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      +-+++
T Consensus       360 f~~~~  364 (365)
T PLN02452        360 FQAKH  364 (365)
T ss_pred             HHHhc
Confidence            87653

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.77  E-value=1.6e-15  Score=147.12  Aligned_cols=312  Identities=15%  Similarity=0.145  Sum_probs=195.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCC-----------CCCCcEEEcCCHHHHHHHHHHHhc----C-------------
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCK-----------LSPDDVYLTAGCKQAIQVILTVLA----R-------------  131 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~-----------~~~~~i~~~~g~~~al~~~~~~l~----~-------------  131 (421)
                      ..+...+...++++.+.+|+.+..+..           .+...-++|+|||+|+..++.+..    .             
T Consensus       119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl  198 (522)
T TIGR03799       119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL  198 (522)
T ss_pred             ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence            355556667899999999998865311           011235778899888877654321    1             


Q ss_pred             ---------CCCeEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEe--CCCC
Q 014631          132 ---------PGANILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIV--NPGN  193 (421)
Q Consensus       132 ---------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~--~p~n  193 (421)
                               ++..|++++-+|+++..++...|.   +++.+|++.  ++.+|+++|++.+.    ++++.++++  ..++
T Consensus       199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt  276 (522)
T TIGR03799       199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT  276 (522)
T ss_pred             hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence                     134688899999999999999988   688888753  45799999999875    344444444  5577


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      .||.+   +++++|+++|+++|+++++|.+|++...-.... ..+..+..-  ..+..|.||+++ ....+|+++++++.
T Consensus       277 ~tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~a--DSit~d~HK~l~-~P~g~G~llvr~~~  350 (522)
T TIGR03799       277 ETGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERA--DSVTIDAHKQLY-VPMGAGMVLFKDPA  350 (522)
T ss_pred             CCCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhC--CEEEEChhhcCC-cCcccEEEEEeCHH
Confidence            89999   779999999999999999999998743211100 012222111  255668999743 34558999987532


Q ss_pred             cchhHHHHHHHHhhhc--------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631          273 GILQELRIVDSIKGYL--------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI  338 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  338 (421)
                             +.+.+....              ...++-+.. ...+..+|+.....+++++.++..++++++.+.|++.|++
T Consensus       351 -------~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~  422 (522)
T TIGR03799       351 -------LMSAIEHHAEYILRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDF  422 (522)
T ss_pred             -------HHHHhccCcchhcCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence                   233332210              011122222 2235555655556789999999999999999999999999


Q ss_pred             cccCCCCceeEEEEecCcccccCC----------C-----C--hHHHHHHHHhhcCeeEEeCCCCC-----C--CCeEEE
Q 014631          339 TCPRKPEGSMFVMVKLNLSLLEGI----------S-----D--DMEFALQLAKEESVIVLPGMAVG-----M--KNWLRI  394 (421)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~----------~-----~--~~~~~~~ll~~~gv~v~~g~~~~-----~--~~~iRi  394 (421)
                      +++..|.-+ .+.+++........          .     +  ...+..+ +.+.|..........     .  ...+|+
T Consensus       423 el~~~p~l~-iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~-~~~~G~~~vs~t~l~~~~~~g~~~~~lR~  500 (522)
T TIGR03799       423 ELVTEPELC-LLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKR-QREAGKSFVSRTRLTPAQYDHQPTVVFRV  500 (522)
T ss_pred             EEecCCCcc-EEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHH-HHhcCCEEEEEEEecccccCCCCcEEEEE
Confidence            966555444 33344321111000          0     0  0122333 344566554422211     1  246999


Q ss_pred             Eec---CCHHHHHHHHHH
Q 014631          395 TFA---IEPSALEEGLGR  409 (421)
Q Consensus       395 ~~~---~~~e~l~~~~~~  409 (421)
                      ++.   ++.++++.+++.
T Consensus       501 ~~~np~tt~~~i~~~l~~  518 (522)
T TIGR03799       501 VLANPLTTHEILQDILDE  518 (522)
T ss_pred             EecCCCCCHHHHHHHHHH
Confidence            997   567888887764

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.76  E-value=1.6e-15  Score=153.39  Aligned_cols=347  Identities=15%  Similarity=0.100  Sum_probs=207.6

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV  124 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~  124 (421)
                      +++|+..|.-....+...+|++.+++.+++.+..  .+....-..+....+|+.|.+.-+ .-..++++|+++|++|++.
T Consensus       366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~--hv~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~  442 (817)
T PLN02974        366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYG--HVMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEV  442 (817)
T ss_pred             eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCC--ccccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHH
Confidence            5677666532222222358999999999998732  111111123444555555544111 0113689999999999999


Q ss_pred             HHHHhcC---------------------CCCeEEEcCCCCcchHHHHhhcCce---------e------EeeeccC----
Q 014631          125 ILTVLAR---------------------PGANILLPKPGFPLYEANARHTRLE---------I------RHFDLLP----  164 (421)
Q Consensus       125 ~~~~l~~---------------------~gd~Vl~~~p~y~~~~~~~~~~g~~---------~------~~~~~~~----  164 (421)
                      +++...+                     ...+|+....+|++....+...+..         .      ..++.+.    
T Consensus       443 AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~  522 (817)
T PLN02974        443 ALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMR  522 (817)
T ss_pred             HHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccc
Confidence            9875421                     1246999999999865444433321         0      0010000    


Q ss_pred             ---------CC----------Ccc-----C------------CHHHHHhhhc-------cCceEEEEeCC--CCCcccc-
Q 014631          165 ---------EK----------GWE-----V------------DLDGLEALAD-------ENTVAMVIVNP--GNPCGNV-  198 (421)
Q Consensus       165 ---------~~----------~~~-----~------------d~e~l~~~~~-------~~~~~i~~~~p--~nptG~~-  198 (421)
                               ..          .|.     .            ..+.+++.+.       .+..+.++..|  +.-.|++ 
T Consensus       523 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~  602 (817)
T PLN02974        523 NGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLL  602 (817)
T ss_pred             cccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCccc
Confidence                     00          000     0            0134555543       23455667777  5667876 


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQE  277 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~  277 (421)
                      .+++.++++.++|++||+++|.||+++++++.|..+. ...++...+++   +++|.+ .+| +++|.++++        
T Consensus       603 ~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa-~e~~gv~PDIi---~~gKgL-tgG~~Plaa~l~~--------  669 (817)
T PLN02974        603 IDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESA-WELLGCKPDIA---CYAKLL-TGGLVPLAATLAT--------  669 (817)
T ss_pred             CCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhh-HHhcCCCCCEE---eecccc-cCCCCccEEEEEc--------
Confidence            4678899999999999999999999999988886542 33344333344   578995 567 699999996        


Q ss_pred             HHHHHHHhh------h-cccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHH----HHhhcCCCccccCCCC
Q 014631          278 LRIVDSIKG------Y-LNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICY----DRIKEIPCITCPRKPE  345 (421)
Q Consensus       278 ~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~----~~l~~~~g~~~~~~~~  345 (421)
                      +++.+.+..      . ...+.+.++++++++.+.|+...+ +..++..+..+++.+++.    +.|+++|.+..+ . .
T Consensus       670 ~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V-R-g  747 (817)
T PLN02974        670 EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV-V-S  747 (817)
T ss_pred             HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-E-e
Confidence            367776642      1 123568899999999888876332 223333334444444333    344555555423 2 3


Q ss_pred             ceeEEEEecCccccc-CC--CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          346 GSMFVMVKLNLSLLE-GI--SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       346 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      -|.+..+++...... +.  .....+...++.++||+++|.     .+.+|+.++  .++++++++++.|.+.+
T Consensus       748 ~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        748 LGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             eeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            356777777532110 00  012234444432789999884     257887665  78999999999998876

>PRK15029 arginine decarboxylase; Provisional

Probab=99.76  E-value=1.1e-15  Score=152.33  Aligned_cols=236  Identities=10%  Similarity=-0.008  Sum_probs=153.4

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP  164 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~  164 (421)
                      ...+.+.++..|+.++       .....++++|+|.++..++.+++++||+|+++..+|-+..+++...|+.++++....
T Consensus       204 ~G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~  276 (755)
T PRK15029        204 TGAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR  276 (755)
T ss_pred             CcHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc
Confidence            3335688888888773       245678899999999999999999999999999999999999999999999986432


Q ss_pred             CCCc----cCC-----HHHHHhhhcc--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc
Q 014631          165 EKGW----EVD-----LDGLEALADE--NTV--------AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD  225 (421)
Q Consensus       165 ~~~~----~~d-----~e~l~~~~~~--~~~--------~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~  225 (421)
                       +.+    +++     ++.+++++..  ..+        ++++++|+. .|++   .++++|+++|+++++.|++||||+
T Consensus       277 -~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhG  351 (755)
T PRK15029        277 -NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVC---YNAKEAQDLLEKTSDRLHFDEAWY  351 (755)
T ss_pred             -cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-ccee---eCHHHHHHHHHhcCCeEEEECccc
Confidence             232    234     8889887743  234        899999987 8898   568999999999999999999997


Q ss_pred             ccccCCCCccccccc-----C-CCCCEEEEcccccccCCCCceEEEEEee-CCCcchhHHHHHHHHhhhcccccCCchHH
Q 014631          226 HLTFGSTPYVRMGVF-----G-STVPVITLGSMSKRWIVPGWRLGWLVTS-DPSGILQELRIVDSIKGYLNISSGPATFV  298 (421)
Q Consensus       226 ~~~~~~~~~~~~~~~-----~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (421)
                      .+..-...++....+     . ....++++.|.||+  ++++.-|.++.- ++....+...+.+.+.-..  +++|+.+.
T Consensus       352 ah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~id~~r~~~~l~~~q--STSPSY~L  427 (755)
T PRK15029        352 GYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMMHA--TTSPLYAI  427 (755)
T ss_pred             cccccCccccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCccccCHHHHHHHHHHHc--CCCcHHHH
Confidence            754222222221222     1 11234889999999  456655554432 2211222223333333222  34666666


Q ss_pred             HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          299 QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      .+.+..+........-.+..+...+....+++.+.+++
T Consensus       428 mASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~  465 (755)
T PRK15029        428 CASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY  465 (755)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence            66555443321111223334444455555555555443

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.76  E-value=3.1e-15  Score=153.84  Aligned_cols=308  Identities=16%  Similarity=0.119  Sum_probs=193.3

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC-HHHHHHH---HHHHh-cCCCC----eEEEcCCCCcchHHHHhhcCce
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAG-CKQAIQV---ILTVL-ARPGA----NILLPKPGFPLYEANARHTRLE  156 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g-~~~al~~---~~~~l-~~~gd----~Vl~~~p~y~~~~~~~~~~g~~  156 (421)
                      +|+.++...+.+|+.+..|.    +++.+.++ |+++...   +++.+ .++|+    +|++++..|.+....+...|.+
T Consensus       538 qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~  613 (954)
T PRK05367        538 AGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMK  613 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCE
Confidence            35667777777888776663    35766654 4444423   33332 24565    5999999998888888999999


Q ss_pred             eEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC
Q 014631          157 IRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP  233 (421)
Q Consensus       157 ~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  233 (421)
                      ++.++.+.+  +.+|+++|++.+++   ++.+|++++|++-++..   +++++|+++|+++|+++++|.++......   
T Consensus       614 vv~v~~d~~--G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~~---  685 (954)
T PRK05367        614 VVVVACDEN--GNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQVG---  685 (954)
T ss_pred             EEEECCCCC--CCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhccC---
Confidence            999987543  46999999998865   35677888888754444   45999999999999999999999642211   


Q ss_pred             cccccccCCCCCEEEEcccccccCC----CCceEEEEEeeCCCcchhHHHHHHHHhhhc---------ccccCCchH---
Q 014631          234 YVRMGVFGSTVPVITLGSMSKRWIV----PGWRLGWLVTSDPSGILQELRIVDSIKGYL---------NISSGPATF---  297 (421)
Q Consensus       234 ~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~---  297 (421)
                      ......++.+   ++..|++|+|+.    +|..+|.+.+.+.        +...+....         ..+...+..   
T Consensus       686 l~~pg~~GAD---i~~~s~HK~f~~P~G~GGPg~G~l~vr~~--------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~a  754 (954)
T PRK05367        686 LARPGDIGAD---VSHLNLHKTFCIPHGGGGPGVGPIGVKAH--------LAPFLPGHPVQIAGGETGIGAVSAAPFGSA  754 (954)
T ss_pred             CCChhhcCCC---EEEecCcccCCCCcCCCCCceEEEeeccc--------ccccCCCCccCcCCCCCCcCcchhHHHHHH
Confidence            1111223333   778899999763    3445888887521        221111100         000111112   


Q ss_pred             -HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE--EEEecCcccccCCCChHHHHHHHHh
Q 014631          298 -VQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF--VMVKLNLSLLEGISDDMEFALQLAK  374 (421)
Q Consensus       298 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~  374 (421)
                       ....+..++.....+++.+..+..-.+.+++.+.|++...+. ...|.+..+  +.+.++...........++..+| .
T Consensus       755 l~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~-~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL-~  832 (954)
T PRK05367        755 SILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVL-YTGANGRVAHECILDLRPLKESTGITVDDIAKRL-I  832 (954)
T ss_pred             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-ccCCCCCcccceEEEeecccccCCCCHHHHHHHH-H
Confidence             222233344444467777877777799999999998742332 212221111  22223211000011356777766 7


Q ss_pred             hcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          375 EESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       375 ~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++|+.... ..|...+.+||+++  ++++||+++++++.++.++..+
T Consensus       833 d~G~~~~t-~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~  878 (954)
T PRK05367        833 DYGFHAPT-MSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE  878 (954)
T ss_pred             HCCCeEee-cCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence            78998754 33445788999997  7899999999999988877654

>PLN02263 serine decarboxylase

Probab=99.76  E-value=8.3e-15  Score=138.36  Aligned_cols=294  Identities=14%  Similarity=0.021  Sum_probs=200.8

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLP  164 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~  164 (421)
                      +..++++.+.+|+.+.+|.+.+...-++|+|||+++...+.+..+  +...+++++.+|++...++..+|.+++.+|.+ 
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d-  208 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL-  208 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence            457999999999999888543222458899999999888766543  33478889999999999999999999999875 


Q ss_pred             CCCccCCHHHHHhhhccCc---eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc-----EEEEcccccccccC-CCCcc
Q 014631          165 EKGWEVDLDGLEALADENT---VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI-----MVISDEVYDHLTFG-STPYV  235 (421)
Q Consensus       165 ~~~~~~d~e~l~~~~~~~~---~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~-~~~~~  235 (421)
                       .++.+|+++|++.+.+++   .+|+.+.++.++|.+   +++++|.++|+++|+     ++++|.+|+++... -....
T Consensus       209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~  284 (470)
T PLN02263        209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP  284 (470)
T ss_pred             -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence             356799999999886543   345566778899999   999999999999997     99999999886531 01111


Q ss_pred             cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc--------ccccCCchHHHHHHHHHhh
Q 014631          236 RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--------NISSGPATFVQGAVPQIFK  307 (421)
Q Consensus       236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~  307 (421)
                      .+.....- . =+..+.||+ +.....+|.++.+++.        .+.+....        ...++-+......+...|.
T Consensus       285 ~~df~~~v-D-SIsvD~HK~-l~~P~~cgvll~R~~~--------~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~  353 (470)
T PLN02263        285 KVTFKKPI-G-SVSVSGHKF-VGCPMPCGVQITRMEH--------INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN  353 (470)
T ss_pred             ccCCCcCc-c-EEEECCccc-cCCCcCEEEEEEehhh--------HhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHH
Confidence            11111111 1 223489999 5666889999997421        12221110        1111112122344445565


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC
Q 014631          308 NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG  387 (421)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~  387 (421)
                      ....+++.+..++..++.+++.+.|++. ++..+..|... .+.+.-+        .+..      ..+|..+.+     
T Consensus       354 ~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~-~V~f~~p--------~~~~------~~~gW~L~~-----  412 (470)
T PLN02263        354 RKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSS-TVVFERP--------KDEE------FVRRWQLAC-----  412 (470)
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCce-EEEEecC--------chHH------hhcceEEcc-----
Confidence            5557888899999999999999999988 66655556543 3333322        1111      124665554     


Q ss_pred             CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          388 MKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       388 ~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      .++.+++++.  .+.+.++++++.|++.....
T Consensus       413 ~~~~~Hivvmphv~~~~id~fi~DL~~~~~~~  444 (470)
T PLN02263        413 QGNIAHVVVMPSVTIEKLDYFLKELVEKRSTW  444 (470)
T ss_pred             CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence            1356898886  58899999999999887643

>PRK04311 selenocysteine synthase; Provisional

Probab=99.75  E-value=3.6e-15  Score=142.65  Aligned_cols=324  Identities=14%  Similarity=0.077  Sum_probs=193.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC-----CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYSPS-----VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA  134 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~~~-----~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd  134 (421)
                      .+.++.+.+++.+.+.......|...     .-+..+++.++++++        .+..+++++++.|+++++.++ .+||
T Consensus        96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~G--------ae~a~vv~sgtaAl~l~l~~l-~~Gd  166 (464)
T PRK04311         96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTG--------AEDALVVNNNAAAVLLALNAL-AAGK  166 (464)
T ss_pred             CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHh-CCCC
Confidence            45789999999998865422122211     113578888888873        346778888889999988665 7999


Q ss_pred             eEEEcCCCCcc------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC--cccccCHHHHHH
Q 014631          135 NILLPKPGFPL------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP--CGNVFTYQQLQK  206 (421)
Q Consensus       135 ~Vl~~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np--tG~~~~~~~l~~  206 (421)
                      +|++++..+..      +.......|++++.++...    ..++++++++++++++++++++++|+  +|..- ..++++
T Consensus       167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~-~~dl~e  241 (464)
T PRK04311        167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTK-EVSLAE  241 (464)
T ss_pred             EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCC-cCCHHH
Confidence            99999865542      1234567899988886532    24789999999999999999999998  35321 146999


Q ss_pred             HHHHHHhcCcEEEEcccccccc----cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          207 IAEKARKLGIMVISDEVYDHLT----FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       207 i~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      |+++|++||+++|+|...+.+.    ++-.....+...-..+-.++++|.+|.++.+  ..|+++++        +++++
T Consensus       242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~--------~~li~  311 (464)
T PRK04311        242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGK--------KELIA  311 (464)
T ss_pred             HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEc--------HHHHH
Confidence            9999999999999999654331    1100111111211112238889999997655  48999885        35666


Q ss_pred             HHhhhcc-cccCCchHHHHHHHHHhhcc---c--------hhHHHHHHHHHHHHHHHHHHHhhcCC--Cc--cccCC---
Q 014631          283 SIKGYLN-ISSGPATFVQGAVPQIFKNT---K--------EDFFSKIVDILRDTADICYDRIKEIP--CI--TCPRK---  343 (421)
Q Consensus       283 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~---~--------~~~~~~~~~~~~~~~~~~~~~l~~~~--g~--~~~~~---  343 (421)
                      +++.... ...........++.+++...   .        ...+....++++++.+.+.+.|++.+  ++  .+...   
T Consensus       312 ~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~  391 (464)
T PRK04311        312 RLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQ  391 (464)
T ss_pred             HHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCc
Confidence            6653221 01112223333333333210   0        11123334667778888888887653  22  21100   


Q ss_pred             CCce-------eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHH
Q 014631          344 PEGS-------MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       344 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~  415 (421)
                      ..+|       .-.-+.++..    .....++.. .+++....|..-   -..+.+.+.+. ..++|++.++++|.+++.
T Consensus       392 ~gggs~p~~~~~~~~v~~~~~----~~~~~~l~~-~lr~~~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~  463 (464)
T PRK04311        392 VGGGSLPVDRLPSAAVTLTPK----DRSLEALAA-RLRLLPPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALLEALN  463 (464)
T ss_pred             cCCCCCcCCCCCeEEEEEeCC----CCCHHHHHH-HHhcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence            0111       1111223211    113444444 456644333321   12466777775 678899999999988764

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.73  E-value=5.9e-15  Score=148.22  Aligned_cols=311  Identities=13%  Similarity=0.110  Sum_probs=193.8

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC-CHHHHHHHHHHHhc-------CCC-CeEEEcCCCCcchH
Q 014631           80 DCYSP---SVGILPARRAIADYLNSELPCKLSPDDVYLTA-GCKQAIQVILTVLA-------RPG-ANILLPKPGFPLYE  147 (421)
Q Consensus        80 ~~y~~---~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~-g~~~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~  147 (421)
                      +-|.|   .+|+-++-..+.+++.+..|.    +.+-+.+ +|+++....+.++.       +++ ++|+++...|.+..
T Consensus       530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp  605 (954)
T PRK12566        530 HPFAPREQAEGYRAMIDELEAWLCAITGF----DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP  605 (954)
T ss_pred             CCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence            46666   677777767777777665553    3345554 45555545554432       133 67889998887766


Q ss_pred             HHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc
Q 014631          148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY  224 (421)
Q Consensus       148 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~  224 (421)
                      ..+...|++++.++.+.  ++.+|+++|++.++   +++.+|.+++|++-++..   +++++|+++|+++|+++++|.++
T Consensus       606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~  680 (954)
T PRK12566        606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN  680 (954)
T ss_pred             HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence            66888899999999763  33699999999986   567778888988755554   77999999999999999999999


Q ss_pred             cccccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEEEeeCCCcchhHHHHHHHHhhh------------c
Q 014631          225 DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGILQELRIVDSIKGY------------L  288 (421)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~~------------~  288 (421)
                      ....   ........++.+   ++.++++|+|+.|    |.-+|.+.+.+        .+...+...            .
T Consensus       681 ~~a~---~~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--------~L~pfLp~~P~~d~~G~~~r~g  746 (954)
T PRK12566        681 LNAQ---VGLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--------HLAPFVANHPVVPVEGPDPNNG  746 (954)
T ss_pred             hhhc---cCCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--------hhhhhccCCCCcCCCCCCCCCC
Confidence            6411   111122344444   8889999998643    34456655532        111111110            1


Q ss_pred             ccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee-EEEEecCccccc--CCC
Q 014631          289 NIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM-FVMVKLNLSLLE--GIS  363 (421)
Q Consensus       289 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-~~~~~~~~~~~~--~~~  363 (421)
                      ...  ...+.....++..++.....+ +.+.......+.+++.+.|.+..++. . .+..+. +.-+.+....++  ...
T Consensus       747 a~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g~  823 (954)
T PRK12566        747 AVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTGI  823 (954)
T ss_pred             ceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccCC
Confidence            010  111212233334444433334 55555556778899999998743433 2 332222 221212111111  112


Q ss_pred             ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          364 DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       364 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +..++..+|+ ++|+.... ..|...+.+|++++  ++++|||+++++|+++.++..
T Consensus       824 ~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~  878 (954)
T PRK12566        824 SEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG  878 (954)
T ss_pred             CHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence            4567777776 78997644 34445789999998  899999999999999888754

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.73  E-value=1.7e-16  Score=147.50  Aligned_cols=237  Identities=16%  Similarity=0.178  Sum_probs=149.5

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK  166 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  166 (421)
                      -+.+.++..|+.++.       ....++++|+|.++..++.+++++||+|+++..+|.+...++...|+.+++++.. .+
T Consensus        67 ~I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~  138 (417)
T PF01276_consen   67 IIKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DN  138 (417)
T ss_dssp             HHHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-
T ss_pred             HHHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-cc
Confidence            356888888888842       4567889999999999999999999999999999999999999999999998764 33


Q ss_pred             Cc----cCCH-----HHHHhhhcc--CceE---EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-cCC
Q 014631          167 GW----EVDL-----DGLEALADE--NTVA---MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-FGS  231 (421)
Q Consensus       167 ~~----~~d~-----e~l~~~~~~--~~~~---i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~  231 (421)
                      .+    ++++     +.+++.+++  ..++   +++++|+. .|++   .++++|+++|+++++.|++||||+... |. 
T Consensus       139 ~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGah~~F~-  213 (417)
T PF01276_consen  139 EYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVC---YDIKEIAEICHKHGIPLLVDEAHGAHFGFH-  213 (417)
T ss_dssp             TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEE---E-HHHHHHHHCCTECEEEEE-TT-TTGGCS-
T ss_pred             ccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEE---ECHHHHHHHhcccCCEEEEEccccccccCC-
Confidence            32    3566     888887754  3445   89999997 8999   569999999999999999999997643 33 


Q ss_pred             CCcccccccCC----CCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHh
Q 014631          232 TPYVRMGVFGS----TVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIF  306 (421)
Q Consensus       232 ~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  306 (421)
                      .-+.+...++.    +..++++.|.||.+  +++. .+++-+.+... .+...+.+.+....  +++|+.+..+.+..+.
T Consensus       214 ~lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~-v~~~~~~~~l~~~~--TTSPSY~lmASlD~a~  288 (417)
T PF01276_consen  214 PLPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRI-VDHERVNEALSMHQ--TTSPSYPLMASLDVAR  288 (417)
T ss_dssp             GGGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCC-TTHHHHHHHHHHHS---SS--HHHHHHHHHHH
T ss_pred             CCccchhhccCccccccceeeeechhhcc--cccccceEEEecCCCc-ccHHHHHHHHHHHc--CCChHHHHHHHHHHHH
Confidence            11111111221    23468889999993  5554 45565554321 22233433333332  3467777666655544


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHh---hcCCCcccc
Q 014631          307 KNTKEDFFSKIVDILRDTADICYDRI---KEIPCITCP  341 (421)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~g~~~~  341 (421)
                      .......-++..++..++.+.+++.+   +++.++.++
T Consensus       289 ~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~  326 (417)
T PF01276_consen  289 AQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVL  326 (417)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEES
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Confidence            32212222333444445555555555   556566643

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.72  E-value=3.5e-14  Score=143.64  Aligned_cols=314  Identities=13%  Similarity=0.076  Sum_probs=196.8

Q ss_pred             CCCCCCC---CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--------CCCCeEEEcCCCCcchH
Q 014631           79 FDCYSPS---VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA--------RPGANILLPKPGFPLYE  147 (421)
Q Consensus        79 ~~~y~~~---~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~  147 (421)
                      .+-|.|.   +|+.++...+..|+.+..|.+   .--+..++|.++-...+.++.        ...++|+++...|...-
T Consensus       516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd---~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP  592 (939)
T TIGR00461       516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD---AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP  592 (939)
T ss_pred             cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC---CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence            3455543   456677777777777766644   222334455554443332222        12257899999998777


Q ss_pred             HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHH-HHHHHHHHHhcCcEEEEccc
Q 014631          148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQ-LQKIAEKARKLGIMVISDEV  223 (421)
Q Consensus       148 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~  223 (421)
                      ..+...|++++.++.+  .++.+|+++|++.+++   ++++|++++|+| +|.+   ++ +++|+++|+++|..+++|.+
T Consensus       593 asa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDgA  666 (939)
T TIGR00461       593 ASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDGA  666 (939)
T ss_pred             HHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEec
Confidence            7788999999999875  3446999999999864   788999999999 7888   55 99999999999999999999


Q ss_pred             ccccccCCCCcccccccCCCCCEEEEcccccccCC----CCceEEEEEeeCCCcchhHHHHHHHHhh------------h
Q 014631          224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV----PGWRLGWLVTSDPSGILQELRIVDSIKG------------Y  287 (421)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~------------~  287 (421)
                      +.....   .......++.+   ++++|.+|+|+.    +|..+|++.+.+.        +...+..            .
T Consensus       667 q~~al~---~l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~~--------L~~~lPg~~v~~t~d~~gre  732 (939)
T TIGR00461       667 NMNAQV---GLTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKSH--------LIPFLPKHDVVSMITGIGGS  732 (939)
T ss_pred             ChhhCC---CCCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhhh--------chhhcCCCcccccccCCCCc
Confidence            965211   11122233333   788899997762    4556899998631        1111110            0


Q ss_pred             ---cccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee-E--EEEecCcccc
Q 014631          288 ---LNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM-F--VMVKLNLSLL  359 (421)
Q Consensus       288 ---~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-~--~~~~~~~~~~  359 (421)
                         ....  ...+......+..+|.....+++.+..+..-.+.+++.++|++.  +.+......+. +  +.++++....
T Consensus       733 q~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~~~  810 (939)
T TIGR00461       733 KSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPLKA  810 (939)
T ss_pred             cccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccchhh
Confidence               0000  11222333444445554456788888888889999999999873  45332222222 2  2234432100


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHhhh
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF--AIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~--~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .......++..+| .++|+.-.. ..|-..+.+-|.+  ..++++||++++++.++-++..+
T Consensus       811 ~~g~~~~dIakrL-~d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~  870 (939)
T TIGR00461       811 KTGIEAIDVAKRL-QDYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA  870 (939)
T ss_pred             hcCCCHHHHHHHH-HhCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence            0012456777776 567987533 3343344544444  48899999999999888776543

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.70  E-value=1.4e-14  Score=134.97  Aligned_cols=313  Identities=15%  Similarity=0.078  Sum_probs=191.5

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCc
Q 014631           66 AADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFP  144 (421)
Q Consensus        66 v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~  144 (421)
                      .++++.+.+-..  +.+.+.  ..++-+.+.+.+.+.++.+.+.+-+++++|||.+++.++..++ ++|++|++.. .|.
T Consensus        19 ~~~~~~~~~~~~--~HRs~~--F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG   93 (374)
T TIGR01365        19 SIEELKNAPLGR--SHRSKL--GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG   93 (374)
T ss_pred             hHHHHhhhhccc--CcCCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence            666666544332  123222  3455444455555555532222235678999999999999998 5889998854 333


Q ss_pred             c-hH-HHHhhcCce-eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631          145 L-YE-ANARHTRLE-IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD  221 (421)
Q Consensus       145 ~-~~-~~~~~~g~~-~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  221 (421)
                      . +. .+++..|.+ +..+...+  +..+++++++.  .   +.+++++.-..||+..|.   ++++..+  ++.++|+|
T Consensus        94 ~r~~~eia~~~g~~~v~~l~~~~--g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVD  161 (374)
T TIGR01365        94 KGWVTDVTKQLKLPDVRVLEAEY--GKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICD  161 (374)
T ss_pred             HHHHHHHHHhcCCCCcEEEcCCC--CCCCCHHHcCC--C---CCEEEecCCCchheeccc---ccccccc--CCCcEEEE
Confidence            2 24 778889984 67776443  33478888873  1   235677776789999664   4444222  58999999


Q ss_pred             ccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh---------------
Q 014631          222 EVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG---------------  286 (421)
Q Consensus       222 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---------------  286 (421)
                      .+.+..    .....+..+|     +++.|..|.+++|+ .++++++++.        ..++.+.               
T Consensus       162 avSs~g----~~~l~~d~iD-----v~~tgsQK~L~~pp-Gls~v~vs~~--------Al~~~~~~~~y~~~~~~~~~~~  223 (374)
T TIGR01365       162 ATSAAF----AQDLDYHKLD-----VVTFSWQKVLGGEG-AHGMLILSPR--------AVARLESYTPAWPLPKIFRLTK  223 (374)
T ss_pred             ccchhc----CCCCChhHCc-----EEEEechhccCCCC-ceEEEEECHH--------HHHHHhhcCCCCCChhhhcccc
Confidence            998873    2223333322     77888999988653 2677777532        2222110               


Q ss_pred             --------h-cccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcCCCccccCC-CC-cee-EEEEe
Q 014631          287 --------Y-LNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEIPCITCPRK-PE-GSM-FVMVK  353 (421)
Q Consensus       287 --------~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-~~-~~~-~~~~~  353 (421)
                              . .....+|+....+++..+|+...+ .+++.+.++++++++.+++.++++..+..... +. .+. ...+.
T Consensus       224 ~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~  303 (374)
T TIGR01365       224 GGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLK  303 (374)
T ss_pred             ccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEE
Confidence                    0 112235555566666666653333 37999999999999999999999832553311 21 122 23334


Q ss_pred             cCcccccCCC-C-----hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          354 LNLSLLEGIS-D-----DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       354 ~~~~~~~~~~-~-----~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      ++........ +     ..++ ...++++||.+.+|..-..++.+||+..  .+.+|++.+++.|.=+.
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~  371 (374)
T TIGR01365       304 VVDPAIDALDEDAQADFAKEL-ISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAF  371 (374)
T ss_pred             eCCccccccccchhhHHHHHH-HHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence            4322110000 1     2344 4456778999998876555688999865  78999999999887543

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.68  E-value=1.2e-13  Score=131.74  Aligned_cols=317  Identities=14%  Similarity=0.083  Sum_probs=183.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYSP-----SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA  134 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd  134 (421)
                      .+.++.+.+++.+.+.......|.-     ..-+..+++.++++++      .  +..+++++++.|+.+++.+ +.+||
T Consensus        91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g------a--e~alvv~sg~aAi~l~l~~-l~~Gd  161 (454)
T TIGR00474        91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG------A--EDALVVNNNAAAVLLALNT-LAKGK  161 (454)
T ss_pred             CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHH-hCCcC
Confidence            3568999999999887532222321     1114688888888873      2  3356677888899988855 57999


Q ss_pred             eEEEcCCCCcc------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc--cc--ccCHHHH
Q 014631          135 NILLPKPGFPL------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC--GN--VFTYQQL  204 (421)
Q Consensus       135 ~Vl~~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt--G~--~~~~~~l  204 (421)
                      +|++++..|..      +.......|++++.++.+.    ..++++++++++++++++++.+++|++  |.  .   .++
T Consensus       162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~---~dl  234 (454)
T TIGR00474       162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEE---VSI  234 (454)
T ss_pred             EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCC---CCH
Confidence            99999876532      1234567899988886532    247899999999999999999999985  53  4   459


Q ss_pred             HHHHHHHHhcCcEEEEcccccccccCC----CCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          205 QKIAEKARKLGIMVISDEVYDHLTFGS----TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       205 ~~i~~~~~~~~~~li~De~~~~~~~~~----~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      ++|+++|++||+++++|...+.+.-.+    ...+.+......+-.+++.|.+|+++.+  ..|+++++        +++
T Consensus       235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~--------~~~  304 (454)
T TIGR00474       235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGK--------KEL  304 (454)
T ss_pred             HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEEC--------HHH
Confidence            999999999999999997643321000    0001111111111228888999997655  47999885        245


Q ss_pred             HHHHhhhccc-ccCCchHHHHHHHHHhhcc---ch--------hHHHHHHHHHHHHHHHHHHHhhcC--CCccc--cCCC
Q 014631          281 VDSIKGYLNI-SSGPATFVQGAVPQIFKNT---KE--------DFFSKIVDILRDTADICYDRIKEI--PCITC--PRKP  344 (421)
Q Consensus       281 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~---~~--------~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~--~~~~  344 (421)
                      +++++..... ..........++.+.+...   .+        .-+....++++++.+.+.+.|++.  +++.+  ...+
T Consensus       305 i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~  384 (454)
T TIGR00474       305 IERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGL  384 (454)
T ss_pred             HHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcC
Confidence            5544332210 0111222222222222210   01        122233456666777777777764  34321  1011


Q ss_pred             ---Ccee-------EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHH
Q 014631          345 ---EGSM-------FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRI  410 (421)
Q Consensus       345 ---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l  410 (421)
                         .+|.       -.-+.+...    ..+..++.. .+++....|...   -..+.+.+.+. ..++|++.++++|
T Consensus       385 ~~~ggg~~p~~~l~~~~v~~~~~----~~~~~~l~~-~lr~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       385 SQVGGGSLPDERLPSYAVTLTPD----GLSAEKLEA-RLRELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL  453 (454)
T ss_pred             CcccCCCCcCCCCCeEEEEEecC----CCCHHHHHH-HHhcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence               1111       111222211    113445544 456666433321   12466777775 6778888887765

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.68  E-value=1.2e-13  Score=127.14  Aligned_cols=325  Identities=16%  Similarity=0.131  Sum_probs=205.3

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      .++|+-| |+     ..|++|.+++++.+.+..        .+...+.  ..++-+.+.+.+++.++++.+-+-+++.+|
T Consensus         5 ~~nF~aG-Pa-----~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~--F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~Gg   76 (364)
T PRK12462          5 QLNFSGG-PG-----ALPDTVLEQVRQAVVELPETGLSVLGMSHRSSW--FSSLLAQAEADLRDLLGIPDEYGVVFLQGG   76 (364)
T ss_pred             cceecCC-Cc-----CCCHHHHHHHHHHHhcccccCccccccccccHH--HHHHHHHHHHHHHHHhCCCCCCeEEEEecc
Confidence            5678777 33     467888888887765411        1122221  234444444445555554323333455666


Q ss_pred             HHHHHHHHHHHhcCCCCeEE-EcCCCCcc--hHHHHhhcCceeEeeeccCCCC--ccCCHHHHHhhhccCceEEEEeCCC
Q 014631          118 CKQAIQVILTVLARPGANIL-LPKPGFPL--YEANARHTRLEIRHFDLLPEKG--WEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       118 ~~~al~~~~~~l~~~gd~Vl-~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~--~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      +|.++..+...++++||+++ +...++.+  +...++..| ++..+......+  ..++++++  .+.++.+.+.+++-.
T Consensus        77 gT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NE  153 (364)
T PRK12462         77 SSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNE  153 (364)
T ss_pred             HHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCC
Confidence            99999999999999999765 55555554  355566666 544443211212  22445554  233456677777777


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      ..||+..+        ++.+.++.++|+|.+.+.+.    ...++..++     +++.+..|.+|.||  ++.+++++  
T Consensus       154 TstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~d-----vi~agsQKnlgP~G--ltvvivs~--  212 (364)
T PRK12462        154 TVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAYG-----MVYAHAQKNLGPAG--VTVAIIRR--  212 (364)
T ss_pred             CCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHcc-----EEEeeccccCCCCc--eEEEEECH--
Confidence            78899875        23334689999999987732    233444442     66778899999777  67888763  


Q ss_pred             cchhHHHHHHHHhh-------------hcccccCCchHHHHHHHHHhhccchh--HHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          273 GILQELRIVDSIKG-------------YLNISSGPATFVQGAVPQIFKNTKED--FFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       273 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                            +++++...             ......+|+....+++..+++...++  +++.+.++.+++++.+++.+.+.++
T Consensus       213 ------~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~  286 (364)
T PRK12462        213 ------ALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNE  286 (364)
T ss_pred             ------HHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence                  22222111             11233588888899988888765444  8999999999999999999999876


Q ss_pred             cccc-CCCCc--eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          338 ITCP-RKPEG--SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       338 ~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      +... ..+..  .+-+.+++....     ...+|+. .++++|+.-.-|+.  .-+.+|+|+=  .+.|.++++++-+++
T Consensus       287 ~~~~~~~~~~RS~mnv~f~~~~~~-----l~~~f~~-~a~~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~  358 (364)
T PRK12462        287 VIDCHAHRAARSTMNVAFRFRQPR-----LDTLFKE-QSTEAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKD  358 (364)
T ss_pred             cccCCCChhhcCcceEEEEcCCHH-----HHHHHHH-HHHHCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHH
Confidence            5521 12222  234444554321     2445555 46888998877764  2467999984  788999998888888


Q ss_pred             HHHH
Q 014631          413 FCQR  416 (421)
Q Consensus       413 ~~~~  416 (421)
                      +-++
T Consensus       359 f~~~  362 (364)
T PRK12462        359 FAIR  362 (364)
T ss_pred             HHHh
Confidence            7654

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.67  E-value=3.8e-14  Score=139.90  Aligned_cols=165  Identities=13%  Similarity=0.159  Sum_probs=119.6

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-HhhcCceeEeeeccCCC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN-ARHTRLEIRHFDLLPEK  166 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~~~~~~~~  166 (421)
                      +.+.++..|+.++       ....-++++|+|.++..++.+++.+||.|+++..+|-+..+. ..+.|+.++++.... +
T Consensus       176 i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n  247 (720)
T PRK13578        176 AKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-N  247 (720)
T ss_pred             HHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-c
Confidence            5577777777763       245678899999999999999999999999999999998885 889999999987543 3


Q ss_pred             Ccc----CCHHH-----HHhhhccC----------ceEEEEeCCCCCcccccCHHHHHHHHHH-HHhcCcEEEEcccccc
Q 014631          167 GWE----VDLDG-----LEALADEN----------TVAMVIVNPGNPCGNVFTYQQLQKIAEK-ARKLGIMVISDEVYDH  226 (421)
Q Consensus       167 ~~~----~d~e~-----l~~~~~~~----------~~~i~~~~p~nptG~~~~~~~l~~i~~~-~~~~~~~li~De~~~~  226 (421)
                      .++    ++.++     +++++...          .+++++++|+. -|+++   ++++|+++ ++.++ +|++||||+.
T Consensus       248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~y---di~~I~~~~~h~~~-~llvDEAhga  322 (720)
T PRK13578        248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIY---NARQVVDKIGHLCD-YILFDSAWVG  322 (720)
T ss_pred             ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceee---cHHHHHHHhhccCC-cEEEeCcchh
Confidence            333    45444     77776543          47889999987 89995   47888887 67778 9999999977


Q ss_pred             cc-cCCC--Ccccc-cccCCC-CCEEEEcccccccCCCCceEEEEE
Q 014631          227 LT-FGST--PYVRM-GVFGST-VPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       227 ~~-~~~~--~~~~~-~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +. |...  .+++. ...+.+ ..++++.|.||.  ++++.-+.++
T Consensus       323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~L  366 (720)
T PRK13578        323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQI  366 (720)
T ss_pred             hhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhh
Confidence            54 3321  12111 122332 346888999999  4565444443

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.66  E-value=5.4e-14  Score=131.81  Aligned_cols=269  Identities=17%  Similarity=0.142  Sum_probs=172.4

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEcCCHHHHHHHHHHHhcC-------
Q 014631           64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-----PDDVYLTAGCKQAIQVILTVLAR-------  131 (421)
Q Consensus        64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~-------  131 (421)
                      ..+.+.+...++. +...|...+...++++.+.+|+.+.+|.+..     ...-++|+|||+++...+.+..+       
T Consensus        54 ~i~~~~l~~~~n~-n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~  132 (373)
T PF00282_consen   54 SILADLLASALNQ-NGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSK  132 (373)
T ss_dssp             HHHHHHHHHHHT--BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhcc-cccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhh
Confidence            3344445555543 3445555555789999999999999987621     24568899999998777644321       


Q ss_pred             -CC------CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---C--ce-EEEEeCCCCCcccc
Q 014631          132 -PG------ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---N--TV-AMVIVNPGNPCGNV  198 (421)
Q Consensus       132 -~g------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~--~~-~i~~~~p~nptG~~  198 (421)
                       .|      -.|++++-+|+++..++...|.+++.+|.++  ++.+|+++|++.+.+   +  +. .|+.+.++..||.+
T Consensus       133 ~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~  210 (373)
T PF00282_consen  133 AKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI  210 (373)
T ss_dssp             HHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB
T ss_pred             hcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc
Confidence             12      2577778899999999999999999998865  457999999887643   2  23 45566778889999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccC-CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFG-STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                         +++++|.++|+++|+++++|.+|++..+- ......+..++.-+ -| ..++||++ .....+|+++.+++..    
T Consensus       211 ---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~ad-Si-t~d~HK~l-~~P~~~~~~l~r~~~~----  280 (373)
T PF00282_consen  211 ---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERAD-SI-TIDPHKWL-GVPYGCGVLLVRDKSD----  280 (373)
T ss_dssp             ----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGES-EE-EEETTTTT-S-SSS-EEEEESSGGG----
T ss_pred             ---cCHHHHhhhccccceeeeeccccccccccccccccccccccccc-cc-ccchhhhh-cCCccceeEEeecccc----
Confidence               99999999999999999999999983321 11111111222111 13 33799995 5557899999976432    


Q ss_pred             HHHHHHHhhhc-----------------ccccCCch-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          278 LRIVDSIKGYL-----------------NISSGPAT-FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       278 ~~~~~~~~~~~-----------------~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                        +...+....                 ..+...+. .....+...|.....+++.+..++..++.+++.+.|++.++++
T Consensus       281 --l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~e  358 (373)
T PF00282_consen  281 --LRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFE  358 (373)
T ss_dssp             --HHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred             --hHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence              222111000                 00111122 2233334445544568889999999999999999999998888


Q ss_pred             ccCCCCce
Q 014631          340 CPRKPEGS  347 (421)
Q Consensus       340 ~~~~~~~~  347 (421)
                      ++..|.-+
T Consensus       359 l~~~~~~~  366 (373)
T PF00282_consen  359 LVNEPDLN  366 (373)
T ss_dssp             ESSTTSSS
T ss_pred             EEcCCCce
Confidence            66555544

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.66  E-value=6.2e-14  Score=138.29  Aligned_cols=305  Identities=12%  Similarity=0.068  Sum_probs=180.5

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG  167 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  167 (421)
                      +.+.++..|+.++       ....-++++|+|.++..++.+++.+||.|+++..+|-+..+++.+.|+.+++++... +.
T Consensus       197 i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n~  268 (714)
T PRK15400        197 HKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-NA  268 (714)
T ss_pred             HHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cc
Confidence            4577777787763       234678899999999999999999999999999999999999999999999987543 33


Q ss_pred             cc----CC-----HHHHHhhhccC--ce---EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-cCCC
Q 014631          168 WE----VD-----LDGLEALADEN--TV---AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-FGST  232 (421)
Q Consensus       168 ~~----~d-----~e~l~~~~~~~--~~---~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~  232 (421)
                      ++    ++     .+.+++.+...  .+   .+++++|+. -|++++   +++|+++|+.++  |++||||+.+. |...
T Consensus       269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~  342 (714)
T PRK15400        269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPI  342 (714)
T ss_pred             cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence            32    34     78888877542  23   688999976 899954   677788888777  68999998754 3321


Q ss_pred             C--ccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc
Q 014631          233 P--YVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT  309 (421)
Q Consensus       233 ~--~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  309 (421)
                      -  ..++... +.++.++++.|.||.  ++++.-+.++.-...  .+...+.+.+.-.  .+++|+.+..+.+..+....
T Consensus       343 ~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg~--vd~~~~n~a~~m~--~STSPsY~l~ASLD~a~~~m  416 (714)
T PRK15400        343 YEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKGD--VNEETFNEAYMMH--TTTSPHYGIVASTETAAAMM  416 (714)
T ss_pred             cCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcCC--CCHHHHHHHHHHH--cCCCcHHHHHHHHHHHHHHH
Confidence            1  1122211 112456888999999  456544433321111  2112233322222  23466666555544433211


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCCC------ccccCCCCc----------------e-------------eEEEEec
Q 014631          310 KEDFFSKIVDILRDTADICYDRIKEIPC------ITCPRKPEG----------------S-------------MFVMVKL  354 (421)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~~~~~~~~~----------------~-------------~~~~~~~  354 (421)
                      ....-++..+...+....+++.+.++++      +.++ .|+.                |             .=+++..
T Consensus       417 ~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~-~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~t  495 (714)
T PRK15400        417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLT  495 (714)
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEec-ChhhcccchhcccCccccccCcccccccccccCCceEEEEe
Confidence            1112233344444555555666655544      4322 1110                0             0111222


Q ss_pred             Cccccc----CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          355 NLSLLE----GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       355 ~~~~~~----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      +.....    ...-+...+.+.|+++||.+.-...+  .--+-++++.++++++.++++|.++-+
T Consensus       496 pgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~--~iLfl~s~g~t~~~~~~L~~aL~~f~~  558 (714)
T PRK15400        496 PGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPY--NLLFLFSIGIDKTKALSLLRALTDFKR  558 (714)
T ss_pred             CCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCC--eEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            110000    00012334455568899998754321  112444555899999999999987643

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=1.6e-14  Score=128.19  Aligned_cols=341  Identities=17%  Similarity=0.172  Sum_probs=219.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-C-----CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-F-----DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~-----~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .|.+++||+..+   +.++...+.+++.....+++.. .     ..|+...-+-.+++.||++++       .++.|+. 
T Consensus        92 ~G~~~~N~aS~N---fL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G-------~E~aivY-  160 (467)
T KOG1358|consen   92 DGKDVLNFASAN---FLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG-------TEDAIVY-  160 (467)
T ss_pred             cCceeecccchh---hhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC-------Ccceeee-
Confidence            477888888776   4456778889988888887631 1     237766667899999999984       2445555 


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------------c
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------------T  183 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------------~  183 (421)
                      +-+-.++..++.++++.||.|.+.+-...+.....+...-.+.++.++       |+++++..+.+.            +
T Consensus       161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~  233 (467)
T KOG1358|consen  161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALT  233 (467)
T ss_pred             ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccc
Confidence            445667777888999999999999988888888888888788887654       556665544321            1


Q ss_pred             eEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCC
Q 014631          184 VAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPG  260 (421)
Q Consensus       184 ~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  260 (421)
                      +..++... --+||.+.|   +.+|+++..+|...+|.||.++....+  |.+.......+..+-.++++|+.-+++..|
T Consensus       234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G  310 (467)
T KOG1358|consen  234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG  310 (467)
T ss_pred             eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence            33334444 456999955   788888888999999999999876654  344444444444444477888887766665


Q ss_pred             ceEEEEEeeCCCcchhHHHHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          261 WRLGWLVTSDPSGILQELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                         |+++++.  ..    -..+++......+ .+.++....++..++..  .++-.++.+.++.....+...|+...++.
T Consensus       311 ---gFc~G~~--~i----~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~~  379 (467)
T KOG1358|consen  311 ---GFCAGKS--FI----ADHQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGFI  379 (467)
T ss_pred             ---ceeecce--ee----EeeeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCceE
Confidence               7777732  00    1233343333322 23444555555555543  23333455666666667777777665666


Q ss_pred             ccCCCCceeEEEEecCcccccCCCCh----HHHHHHHHhhcCeeEEeCCCC------CCCCeEEEEec--CCHHHHHHHH
Q 014631          340 CPRKPEGSMFVMVKLNLSLLEGISDD----MEFALQLAKEESVIVLPGMAV------GMKNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gv~v~~g~~~------~~~~~iRi~~~--~~~e~l~~~~  407 (421)
                      +...+. +....+.+..... ..++.    .+++...+.+ |+.+......      -.+..+|||+.  .++|+++++.
T Consensus       380 v~~~~~-SPi~hl~l~~~~~-s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~  456 (467)
T KOG1358|consen  380 VSGSPE-SPIIHLQLERSYG-SREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAA  456 (467)
T ss_pred             EecCcC-Cceeeeeeccccc-chHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHH
Confidence            333333 4455555654321 01122    2344444444 7777654332      22568999997  7899999999


Q ss_pred             HHHHHHHHHh
Q 014631          408 GRIKAFCQRH  417 (421)
Q Consensus       408 ~~l~~~~~~~  417 (421)
                      +.|+++..+.
T Consensus       457 ~~ik~~~~~~  466 (467)
T KOG1358|consen  457 ELIKEVASAV  466 (467)
T ss_pred             HHHHHHHHhh
Confidence            9999987653

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.65  E-value=7.7e-15  Score=136.40  Aligned_cols=252  Identities=18%  Similarity=0.194  Sum_probs=156.2

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|++++||..|.-+... -..+|.+.+++.+++......  .......+....+++.+.+..+  -..++++++++|++
T Consensus        13 ~dG~~~lD~~~~~~~~~l-Gh~~p~i~~ai~~~~~~~~~~--~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse   87 (339)
T PF00202_consen   13 VDGREYLDFMSGYGSVNL-GHNHPEIAEAIAEQANKLNYV--SFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSE   87 (339)
T ss_dssp             TTSEEEEESSHHHHTTTT--BT-HHHHHHHHHHHHHCSSC--STTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHH
T ss_pred             CCCCEEEECCCCccceec-CCCccccchhHHHHhhhcccc--cccceeccchhhhhhhhhhccc--cccceeeeccCchH
Confidence            358899999877533222 246789999999998874321  1122234556666666666553  24578999999999


Q ss_pred             HHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC---ccCCHHHHH
Q 014631          121 AIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG---WEVDLDGLE  176 (421)
Q Consensus       121 al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~~d~e~l~  176 (421)
                      |++.+++...       .++ .+|+....+|++....+...+.             .+..+|.+....   ..-..+.++
T Consensus        88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  167 (339)
T PF00202_consen   88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALE  167 (339)
T ss_dssp             HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHH
Confidence            9999998765       233 6899999999986543332211             123333321000   000011122


Q ss_pred             h---hhccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcc
Q 014631          177 A---LADENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGS  251 (421)
Q Consensus       177 ~---~~~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  251 (421)
                      +   ....+..+.++..| +...|.. ++++.+++|.++|++||+++|+||+++++.+.|..+ ....++...+++   +
T Consensus       168 ~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~PDiv---~  243 (339)
T PF00202_consen  168 ELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDPDIV---T  243 (339)
T ss_dssp             HHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSSSEE---E
T ss_pred             HHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccCccc---c
Confidence            2   22233345566666 4445654 577889999999999999999999999998887643 333344333344   4


Q ss_pred             cccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc
Q 014631          252 MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK  310 (421)
Q Consensus       252 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~  310 (421)
                      ++|.++ .|+++|.++++        +++.+.+..... .+...+++.+.++.+.|+...
T Consensus       244 ~gK~l~-gG~p~sav~~~--------~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~  294 (339)
T PF00202_consen  244 FGKGLG-GGLPISAVLGS--------EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILE  294 (339)
T ss_dssp             EEGGGG-TTSSEEEEEEE--------HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHH
T ss_pred             cccchh-hhhhccccccc--------chhhccccccccccccccchHhhhhhhhHHHhhc
Confidence            579964 56999999996        356665544332 345678899999888887633

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.63  E-value=4.8e-13  Score=132.10  Aligned_cols=302  Identities=13%  Similarity=0.089  Sum_probs=175.6

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG  167 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  167 (421)
                      +.+.++..|+.++       .....++++|+|.++..++.+++.+||+|+++..+|-+..+++.+.|+.+++++... +.
T Consensus       197 i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~  268 (713)
T PRK15399        197 HLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NA  268 (713)
T ss_pred             HHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cc
Confidence            4577777788763       244678899999999999999999999999999999999999999999999986433 23


Q ss_pred             cc----CCH-----HHHHhhhccC-----ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEE-EEcccccccc-cCC
Q 014631          168 WE----VDL-----DGLEALADEN-----TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV-ISDEVYDHLT-FGS  231 (421)
Q Consensus       168 ~~----~d~-----e~l~~~~~~~-----~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~De~~~~~~-~~~  231 (421)
                      ++    ++.     +.+++.+.+.     ++++++++|+. -|++++   +++|.++|   |+.+ ++||||+.+. |..
T Consensus       269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p  341 (713)
T PRK15399        269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHP  341 (713)
T ss_pred             cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence            33    445     8888877532     25788999976 899965   56666666   5655 6999998754 322


Q ss_pred             CCccccccc----CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhh
Q 014631          232 TPYVRMGVF----GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFK  307 (421)
Q Consensus       232 ~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  307 (421)
                       .+.+...+    ..+..++++.|.||.  ++++.-+.++.-...  .+...+.+.+.-.  .+++|+.+..+.+..+..
T Consensus       342 -~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk~~--vd~~~~n~a~~m~--~STSPsY~LmASLD~a~~  414 (713)
T PRK15399        342 -IYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIKGE--YDEETFNEAFMMH--TSTSPSYPIVASVETAAA  414 (713)
T ss_pred             -ccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeecCC--CCHHHHHHHHHHH--cCCCcHHHHHHHHHHHHH
Confidence             12212222    123234568899999  466654444332221  2222333333322  234666666555544332


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhcCCC------ccccCCCC-----------------------------ceeEEEE
Q 014631          308 NTKEDFFSKIVDILRDTADICYDRIKEIPC------ITCPRKPE-----------------------------GSMFVMV  352 (421)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~~~~~~~~-----------------------------~~~~~~~  352 (421)
                      ......-++..+...+....+++.+.++.+      +.++ .|+                             +..=+++
T Consensus       415 ~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~-~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI  493 (713)
T PRK15399        415 MLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIW-QPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTI  493 (713)
T ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeec-CccccCCccceecCCCcccccccccccccccCCCceEEE
Confidence            111111223333334444444555544322      2322 110                             0001112


Q ss_pred             ecCccc----c-cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          353 KLNLSL----L-EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       353 ~~~~~~----~-~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      ..+...    . ..+.... .+.+.|+++||.+.-...+  .--+-++++.++++++.+++.|.++-+
T Consensus       494 ~t~g~~~~g~~~~~Gi~g~-~l~~~L~e~gI~~E~~d~~--~vL~l~s~g~t~~~~~~L~~aL~~f~~  558 (713)
T PRK15399        494 LTPGMDEQGNMSEEGIPAA-LVAKFLDERGIVVEKTGPY--NLLFLFSIGIDKTKAMGLLRGLTEFKR  558 (713)
T ss_pred             EecCcccccccccCCCCHH-HHHHHHHHcCCEEEecCCC--eEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            221100    0 0011233 4445568899998754321  112444555899999999999987744

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.62  E-value=4.6e-16  Score=139.95  Aligned_cols=190  Identities=17%  Similarity=0.193  Sum_probs=133.1

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP  141 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p  141 (421)
                      +++.+.+++.+.... .- .|+......++++.++++++        .+..+++++||.++.++++++++|++.|++.++
T Consensus         7 ~~~~m~~a~~~a~~g-d~-~Yg~D~~~~~l~~~i~~l~g--------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~   76 (290)
T PF01212_consen    7 PTPAMLEAMAAANVG-DD-AYGEDPTTARLEERIAELFG--------KEAALFVPSGTMANQLALRAHLRPGESVICADT   76 (290)
T ss_dssp             S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred             CCHHHHHHHHccccC-Cc-ccCCChhHHHHHHHHHHHcC--------CCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence            457888888554433 32 69888888999999999984        346678999999999999999999999999999


Q ss_pred             CCcch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCC-cccccCHHHHHHHHHHH
Q 014631          142 GFPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNP-CGNVFTYQQLQKIAEKA  211 (421)
Q Consensus       142 ~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~np-tG~~~~~~~l~~i~~~~  211 (421)
                      +|...   .......|.+++.++..  ++..+++++|++.+..      +++.|.+++|+|. .|+++|.+++++|.++|
T Consensus        77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a  154 (290)
T PF01212_consen   77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA  154 (290)
T ss_dssp             EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred             ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence            88532   33346688888888743  3256999999998754      4678899999885 48999999999999999


Q ss_pred             HhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          212 RKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       212 ~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      ++||+.++.|.+--.-..  .+.   ++..+-..-. ++..|++|.+++++   |.+++-+
T Consensus       155 ~~~gl~lhmDGARl~~a~~~~~~---~~~e~~~~~D-~v~~~~tK~~g~~~---Gavl~~~  208 (290)
T PF01212_consen  155 REHGLPLHMDGARLANAAAALGV---SLAEIAAGAD-SVSFGGTKNGGAPG---GAVLAGN  208 (290)
T ss_dssp             HHHT-EEEEEETTHHHHHCHHHH---HHHHHHTTSS-EEEEETTSTT-SSS---EEEEEES
T ss_pred             HhCceEEEEehhhHHHhhhcccc---cHHHHhhhCC-EEEEEEEccccccc---ceEEEec
Confidence            999999999988532111  011   1122212122 44447999877765   5555543

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.62  E-value=1.1e-12  Score=134.69  Aligned_cols=299  Identities=15%  Similarity=0.155  Sum_probs=189.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCC-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-c
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSV-----G----ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-A  130 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~  130 (421)
                      ..|+.+.+++.+....  ...|+|.+     |    +-+++..+++++      +++++++.++.++|++.+.++.++ .
T Consensus       116 ~~P~~v~~~i~~~~~~--~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~  187 (993)
T PLN02414        116 HVPPVILRNILENPGW--YTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNI  187 (993)
T ss_pred             cCCHHHHHHHHhChHH--HhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhc
Confidence            4667776777665432  13444433     3    456777778877      578999999999999999988766 3


Q ss_pred             CCC--CeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHH
Q 014631          131 RPG--ANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL  204 (421)
Q Consensus       131 ~~g--d~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l  204 (421)
                      ++|  |+|++++..|+.+...+    +..|++++.++....     +      ...+....+++..|+ .+|.+   .++
T Consensus       188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vlvq~P~-~~G~v---~dv  252 (993)
T PLN02414        188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVLVQYPA-TDGEV---LDY  252 (993)
T ss_pred             ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEEEecCC-CCeEE---cCH
Confidence            444  78999999999876555    446888888875321     1      111223344444444 49999   569


Q ss_pred             HHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC---CCCceEEEEEeeCCCcchhHHHHH
Q 014631          205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI---VPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~---~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++|+++|+++|+++++ .++.... .+  ..+...++.+   |++++.+|+.+   ..|.+.|++++++.        +.
T Consensus       253 ~~I~~~ah~~GaL~iV-aad~lal-~~--l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~~--------~~  317 (993)
T PLN02414        253 AEFVKNAHANGVKVVM-ATDLLAL-TM--LKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQE--------YK  317 (993)
T ss_pred             HHHHHHHHHcCCEEEE-EECHHHh-cC--CCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECHH--------HH
Confidence            9999999999999999 4443311 11  1123444444   88899999941   23455899999642        22


Q ss_pred             HHHhh-------------------------hcccccCCchHHHHHHHHHhh-----ccchhHHHHHHHHHHHHHHHHHHH
Q 014631          282 DSIKG-------------------------YLNISSGPATFVQGAVPQIFK-----NTKEDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       282 ~~~~~-------------------------~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      +.+-.                         .+.-..+.|.....++.+.+.     .....++++++++...+..++.+.
T Consensus       318 r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~  397 (993)
T PLN02414        318 RLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAG  397 (993)
T ss_pred             hhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence            21110                         000012344433333333332     123467888899999999999999


Q ss_pred             hhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHH
Q 014631          332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGR  409 (421)
Q Consensus       332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~  409 (421)
                      |.+. |+.+. .+  .+|-.+.+...      ++.++..+| .++||.+....    .+.+|+|++  ++++||+.+++.
T Consensus       398 L~~~-G~~~~-~~--~~f~~vt~~~~------~~~~v~~~L-~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~  462 (993)
T PLN02414        398 LKKL-GFQVQ-SL--PFFDTVKVKCS------DADAIADAA-AKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKV  462 (993)
T ss_pred             Hhhc-CCccC-CC--CCcCeEEEecC------CHHHHHHHH-HHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHH
Confidence            9875 77743 33  23333333321      355666665 66799776432    457999998  899999999999


Q ss_pred             HHH
Q 014631          410 IKA  412 (421)
Q Consensus       410 l~~  412 (421)
                      |..
T Consensus       463 l~~  465 (993)
T PLN02414        463 FAG  465 (993)
T ss_pred             Hcc
Confidence            963

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.61  E-value=1.3e-12  Score=134.61  Aligned_cols=271  Identities=14%  Similarity=0.151  Sum_probs=178.2

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CC--CCeEEEcCCCCcchHHH----HhhcCceeEee
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RP--GANILLPKPGFPLYEAN----ARHTRLEIRHF  160 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~--gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~  160 (421)
                      +-+++..+++++      ++++.++.+..++|++.+.++.++. ++  +|+|++++..|+.+...    ++..|++++.+
T Consensus       123 l~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~  196 (954)
T PRK05367        123 LLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG  196 (954)
T ss_pred             HHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe
Confidence            345566677766      5788999999999999998887762 44  48999999999887654    45679999888


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      +...      |.+      .+++.++++..| |.+|.+   +++++|+++|+++|+++++|..+..+..    ..+...+
T Consensus       197 ~~~~------d~~------~~~~~~vlvq~p-~~~G~i---~d~~~i~~~ah~~Gal~~vda~~~Al~~----l~~pge~  256 (954)
T PRK05367        197 DAAK------ALD------HDDVFGVLLQYP-GTSGEV---RDYTALIAAAHARGALVAVAADLLALTL----LTPPGEM  256 (954)
T ss_pred             cCcc------CCC------cccEEEEEEecC-CCCeee---ccHHHHHHHHHHcCCEEEEEehhhhccC----CCChhhc
Confidence            7532      111      224444555565 569999   5699999999999999999985533221    1123445


Q ss_pred             CCCCCEEEEcccccc-----cCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------------------------ccc
Q 014631          241 GSTVPVITLGSMSKR-----WIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------------------------LNI  290 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~-----~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~  290 (421)
                      +.+   |+++|.+|+     ||.||  .|++++++        ++.+.+...                         +.-
T Consensus       257 GaD---i~vgs~qkfg~P~g~GGP~--aGflavr~--------~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRre  323 (954)
T PRK05367        257 GAD---IAVGSAQRFGVPMGFGGPH--AAYFAVRD--------AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRRE  323 (954)
T ss_pred             CCC---EEEeeCcccCCCCCCCCCC--EEEEEECH--------HHHhhCCCCeeeeecccCCCccccccccccccccccc
Confidence            544   888999998     66665  89998863        233332100                         000


Q ss_pred             ccCCchHHHHHHHHH-----hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCCh
Q 014631          291 SSGPATFVQGAVPQI-----FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDD  365 (421)
Q Consensus       291 ~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (421)
                      ..+.|.....++.+.     +......+++++.++...+..++.+.|+. +|+.+. .+  .+|-.+.+...     .+.
T Consensus       324 kaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~-~~--~~f~~~~~~~~-----~~~  394 (954)
T PRK05367        324 KATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVV-HD--SFFDTLTVEVG-----GDA  394 (954)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccC-CC--CCCCeEEEeCC-----CCH
Confidence            112222222222111     22234578889999999999999999987 487733 22  23333333321     145


Q ss_pred             HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631          366 MEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK  411 (421)
Q Consensus       366 ~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~  411 (421)
                      .++..++ .++||.+..-    ..+.+|+|+.  ++++||+.+++.|.
T Consensus       395 ~~i~~~l-~~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        395 AAVLARA-LAAGINLRRV----DDDHVGISLDETTTREDLAALLAVFG  437 (954)
T ss_pred             HHHHHHH-HHCCceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence            6676665 6679988321    1467999998  78999999999996

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.60  E-value=2.2e-12  Score=112.18  Aligned_cols=350  Identities=11%  Similarity=0.063  Sum_probs=216.7

Q ss_pred             hhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCC-CCCCCCCH-HHHHHHHHHH
Q 014631           25 LTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA---EFDC-YSPSVGIL-PARRAIADYL   99 (421)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~-y~~~~g~~-~l~~~ia~~l   99 (421)
                      .++.+...+|.      ...++|.|+.++-...+. ....+.+++..+.+..+   .++. -.+...++ .+-..+|-++
T Consensus        17 dpl~~lr~~f~------lp~~viyLdgnSLGa~p~-~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLi   89 (407)
T COG3844          17 DPLAKLRDRFA------LPGGVIYLDGNSLGARPR-AVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLI   89 (407)
T ss_pred             CchhhhHhhcc------CCCCeEEeeccccccCch-HHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhh
Confidence            44555555543      377899998776331100 01222233333333221   1211 11222222 4445555555


Q ss_pred             hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcch-----HHHHhhcCceeEeeeccCCCCccCCH
Q 014631          100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLA--RPGANILLPKPGFPLY-----EANARHTRLEIRHFDLLPEKGWEVDL  172 (421)
Q Consensus       100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~-----~~~~~~~g~~~~~~~~~~~~~~~~d~  172 (421)
                            +..+.+++++.+++-.++.++.+.+  ++|++|++++-.-.+.     ...+...+.. ..+      ...+.+
T Consensus        90 ------GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-~~~------~~~~~P  156 (407)
T COG3844          90 ------GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-YDL------EGVIAP  156 (407)
T ss_pred             ------cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-ccc------eeeeCh
Confidence                  4678999999999999998887764  4688888876433322     3334444433 111      123567


Q ss_pred             HHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccc
Q 014631          173 DGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM  252 (421)
Q Consensus       173 e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  252 (421)
                      +++++.+.+++.++++++.+.-||..+   ++.+|.++++++|++++.|=+|+.    |.-...++..+.+   +-|++.
T Consensus       157 ~~~~~~~~dd~AvV~L~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh~~gaD---faigcs  226 (407)
T COG3844         157 RALEEAITDDVAVVLLSHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSA----GAVPVDLHAAGAD---FAIGCS  226 (407)
T ss_pred             HHHHHhhccceEEEEecccccccccee---eHHHHHHHHHhcCceEEeehhccc----CCcceeecccCCC---eeeeee
Confidence            799999999999999999999999994   589999999999999999999987    4334455555544   778888


Q ss_pred             ccccCC-CCceEEEEEeeCCCcchhHHHH------------HHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHH
Q 014631          253 SKRWIV-PGWRLGWLVTSDPSGILQELRI------------VDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       253 sK~~~~-~G~r~G~~~~~~~~~~~~~~~~------------~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      .|.+.. ||-. +++++.+.......+.+            .+.+....    ...++++..+..++..+|+......+.
T Consensus       227 yKYLNgGPGap-a~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~  305 (407)
T COG3844         227 YKYLNGGPGAP-AGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDIT  305 (407)
T ss_pred             ceeccCCCCCc-eeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHH
Confidence            898764 5544 44444322110000111            11111110    112345556666666667654555688


Q ss_pred             HHHHHHHHHHHHHHHHhhcC-C--CccccCCCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631          316 KIVDILRDTADICYDRIKEI-P--CITCPRKPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM  388 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~-~--g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  388 (421)
                      +.+++--.+.+++.+.++.. +  ++. +..|.    .|..+.+..+        +..++... |.++||+.    .|..
T Consensus       306 ~lR~kSlaLTd~fieLvEa~~~~~~l~-l~tPr~~~~rGsqvS~~hp--------~~~~V~qa-Li~rGVig----D~R~  371 (407)
T COG3844         306 ELRKKSLALTDYFIELVEARCEYYGLT-LVTPRAHEERGSQVSLYHP--------HGYQVMQA-LIDRGVIG----DFRE  371 (407)
T ss_pred             HHHHhhhHHHHHHHHHHHhccccCCcE-EeccchhhhccceeeEecC--------cHHHHHHH-HHHcCccc----cccC
Confidence            88888888899999888853 3  344 22443    2445555555        35566555 47789975    2455


Q ss_pred             CCeEEEEec---CCHHHHHHHHHHHHHHHHHhhh
Q 014631          389 KNWLRITFA---IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       389 ~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++.+|+.++   ++-+|+-.+++.|.+++++..-
T Consensus       372 P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a~  405 (407)
T COG3844         372 PDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLAW  405 (407)
T ss_pred             CCeeeecCccceechhHHHHHHHHHHHHHHhhcc
Confidence            789999998   6889999999999999987643

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.58  E-value=3.7e-12  Score=117.93  Aligned_cols=340  Identities=17%  Similarity=0.157  Sum_probs=209.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.-+|||-+..-+.    .+.+...++|..    ++ ..|+.++.+.+|++.++++++        .+.++.|+.++.+-
T Consensus        40 ~dV~IDLrSDTgT~----apS~~m~aAM~~----GD-D~Y~gdpSv~~Lee~vael~G--------~E~alpthqGRgaE  102 (467)
T TIGR02617        40 EDVFIDLLTDSGTG----AVTQSMQAAMMR----GD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAE  102 (467)
T ss_pred             CCeEEECccCCCCC----CCCHHHHHHHHc----CC-cccccCchHHHHHHHHHHHhC--------CceEEECCCCchHH
Confidence            44557775554321    244666676664    32 368877778999999999984        35688899999999


Q ss_pred             HHHHHHhcC-CCCeEEEcCC-------CCcc-hHHHHhhcCceeEeeecc--------CCCCccCCHHHHHhhhcc----
Q 014631          123 QVILTVLAR-PGANILLPKP-------GFPL-YEANARHTRLEIRHFDLL--------PEKGWEVDLDGLEALADE----  181 (421)
Q Consensus       123 ~~~~~~l~~-~gd~Vl~~~p-------~y~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~d~e~l~~~~~~----  181 (421)
                      .++++.+++ ||+.+.+..+       .|.. ....+...|+.++.++.+        ...+..+|++++++.+++    
T Consensus       103 ~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~  182 (467)
T TIGR02617       103 QIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN  182 (467)
T ss_pred             HHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence            999999887 7887775443       2222 345677888887765422        112356899999999874    


Q ss_pred             CceEEEEeCCCC-CcccccCHHHHHHHHHHHHhcCcEEEEccccccc----------ccCCCCccccc-cc-CCCCCEEE
Q 014631          182 NTVAMVIVNPGN-PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL----------TFGSTPYVRMG-VF-GSTVPVIT  248 (421)
Q Consensus       182 ~~~~i~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~----------~~~~~~~~~~~-~~-~~~~~~i~  248 (421)
                      +...+...-.+| -.|.++|.+.++++.++|++||+.++.|.+--.-          .+.+.....+. .+ ...|  .+
T Consensus       183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD--sv  260 (467)
T TIGR02617       183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD--ML  260 (467)
T ss_pred             CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC--EE
Confidence            222221111134 4689999999999999999999999999864321          12233222221 10 1111  34


Q ss_pred             EcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc------cccCCchHHHHHHHHHhhcc-chhHHHHHHHH
Q 014631          249 LGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN------ISSGPATFVQGAVPQIFKNT-KEDFFSKIVDI  320 (421)
Q Consensus       249 ~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~  320 (421)
                      ..|+||.++.| |   |+++++++. ++   ++.++++....      .+++.+.-...+++..|.+. .++++..+..+
T Consensus       261 t~slsKglgApvG---g~Lag~d~~-~~---~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~q  333 (467)
T TIGR02617       261 AMSAKKDAMVPMG---GLLCFKDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQ  333 (467)
T ss_pred             EEEcCCCCCCccc---ceEEecchh-HH---HHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHH
Confidence            55899998776 4   666665421 10   35555554332      12344444455555455442 24555555544


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc----ccccCCCChHHHHHHHHhhcCeeEE-eCCCC-CC------
Q 014631          321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL----SLLEGISDDMEFALQLAKEESVIVL-PGMAV-GM------  388 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~-~~------  388 (421)
                          .+++.+.|.+. |+.++ . .||.-++++...    ..... .....++.+|-.+.||--. -|+.. +.      
T Consensus       334 ----v~yl~~~L~~~-Gvpi~-~-~Gghav~iDa~~~lphip~~~-fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~  405 (467)
T TIGR02617       334 ----VQYLVNGLEEI-GVVCQ-Q-AGGHAAFVDAGKLLPHIPADQ-FPAHALACELYKVAGIRAVEIGSLLLGRDPKTGK  405 (467)
T ss_pred             ----HHHHHHHHHhC-CCcEE-e-cCccEEEEehhhhCCCCChhh-CcHHHHHHHHHHHcCcceEeecceecccCCCCCc
Confidence                44556666655 88744 5 667666664221    11111 1366788888888888532 23321 11      


Q ss_pred             -----CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631          389 -----KNWLRITFA---IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       389 -----~~~iRi~~~---~~~e~l~~~~~~l~~~~~~  416 (421)
                           -.-+|+++.   .|.+.++.+.++|..+.++
T Consensus       406 ~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~  441 (467)
T TIGR02617       406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_pred             cCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence                 156999998   6889999999999888654

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=99.55  E-value=5.5e-12  Score=114.95  Aligned_cols=312  Identities=16%  Similarity=0.158  Sum_probs=203.0

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh----cC-CC---CeEEEcCCCCcchHHHHhhcCcee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL----AR-PG---ANILLPKPGFPLYEANARHTRLEI  157 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~~-~g---d~Vl~~~p~y~~~~~~~~~~g~~~  157 (421)
                      ++..++..++..++...++.+ ...-=..|.|+++++....+..    .+ +|   ..++++...+..+..+++..+.++
T Consensus       116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l  194 (491)
T KOG1383|consen  116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL  194 (491)
T ss_pred             chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence            456788999999888877745 2223356788999955555432    12 23   478888889999999999999999


Q ss_pred             EeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh-cCcEEEEcccccccccC-CCCcc
Q 014631          158 RHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK-LGIMVISDEVYDHLTFG-STPYV  235 (421)
Q Consensus       158 ~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~-~~~~~  235 (421)
                      ..+++++ ..+.+|+..+.+.+++++..++.+.|+.|+|..   +++++|.++..+ +++.+.+|.+-++|... +..  
T Consensus       195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~--  268 (491)
T KOG1383|consen  195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYL--  268 (491)
T ss_pred             Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCcccccccccc--
Confidence            9999875 678899999999999999999999999999999   999999999999 99999999999988742 111  


Q ss_pred             cccccCCCC-CEEEE-cccccccCCCCceEEEEEeeCCCcchhHHHH---HHHHhhhc-ccc---cCCchHHHHHHHHHh
Q 014631          236 RMGVFGSTV-PVITL-GSMSKRWIVPGWRLGWLVTSDPSGILQELRI---VDSIKGYL-NIS---SGPATFVQGAVPQIF  306 (421)
Q Consensus       236 ~~~~~~~~~-~~i~~-~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~---~~~~~~~~-~~~---~~~~~~~~~~~~~~l  306 (421)
                      ....++-.. .+-.+ .+-||- |+.--..||++-++.+.+.  .++   .+.+.... ..+   +-+.....++-++.+
T Consensus       269 ~~~~fdFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~--~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~  345 (491)
T KOG1383|consen  269 NEEEFDFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKELLP--HQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALM  345 (491)
T ss_pred             CccccccCCCCceeEeecccee-eeeecCcEEEEEccccccc--ceEEEeccccCccccCcccccCCcccHHHHHHHHHH
Confidence            111222111 12112 245676 6544447998887543111  000   00011000 111   112222222222344


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC
Q 014631          307 KNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV  386 (421)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~  386 (421)
                      + ..++++.+..+.+.+....+++.+++++++.++..|.-++..   +....     .+.-.+..+++++|..+..-.  
T Consensus       346 ~-lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~---~~s~~-----~~i~elsd~l~~~GW~lnalq--  414 (491)
T KOG1383|consen  346 S-LGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFIL---FGSND-----VNIFELSDLLRKKGWILNALQ--  414 (491)
T ss_pred             H-hhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEE---ccCCc-----cchhhhhHHHHhcCcCccccC--
Confidence            4 345677777888889999999999999888855444433222   33221     122234456688898875432  


Q ss_pred             CCCCeEEEEec---CCHHHHHHHHHHHHHHHHHhhh
Q 014631          387 GMKNWLRITFA---IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       387 ~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       .+..+-+|+.   ..++-.++++..|+++++++.+
T Consensus       415 -~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~  449 (491)
T KOG1383|consen  415 -FPAAIHICVTRVHAREDVADRFVADIRKVVEELKS  449 (491)
T ss_pred             -CCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence             2345666664   3445578889999999888653

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=99.53  E-value=1.3e-12  Score=112.12  Aligned_cols=333  Identities=11%  Similarity=0.102  Sum_probs=201.7

Q ss_pred             CCcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC--CCCeEE
Q 014631           61 RTTPVAADAVVDAVRSAEFD-CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR--PGANIL  137 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--~gd~Vl  137 (421)
                      ..+|.+.+|...++...+.+ ++-.    .+|-+-...+... .   ..-+-++|+++|++|+.++++...+  +-..|+
T Consensus        61 hchp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~st-l---PeLsvc~F~NSGSEANDLALRLAR~ftkhqDvI  132 (452)
T KOG1403|consen   61 HCHPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTST-L---PELSVCFFVNSGSEANDLALRLARNFTKHQDVI  132 (452)
T ss_pred             cCCHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhhc-C---CCceEEEEecCCchhhHHHHHHHHhhcccCceE
Confidence            67899999998888764322 2211    2443333333321 1   1235678999999999999987532  223455


Q ss_pred             EcCCCCcchHHHHh-h------cC---ceeEeeeccCCCC----------------ccCCHHHHHhhhc----cCce-EE
Q 014631          138 LPKPGFPLYEANAR-H------TR---LEIRHFDLLPEKG----------------WEVDLDGLEALAD----ENTV-AM  186 (421)
Q Consensus       138 ~~~p~y~~~~~~~~-~------~g---~~~~~~~~~~~~~----------------~~~d~e~l~~~~~----~~~~-~i  186 (421)
                      +.+..|++...... .      .|   .++.++.+-|..+                ...-.+.+++.+.    .+.. +.
T Consensus       133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA  212 (452)
T KOG1403|consen  133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA  212 (452)
T ss_pred             EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence            66667766432221 0      11   1223332221100                0112334444432    2222 22


Q ss_pred             EEeCC-CCCcccccCH-HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631          187 VIVNP-GNPCGNVFTY-QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG  264 (421)
Q Consensus       187 ~~~~p-~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  264 (421)
                      ++... +.=.|.++|+ ...+++++..+.+|-+.|.||++.+|.+-|..++.+..++--..++   ++.|. +..|.+++
T Consensus       213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIV---tmgKp-mGNGhPVa  288 (452)
T KOG1403|consen  213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIV---TMGKP-MGNGHPVA  288 (452)
T ss_pred             HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchh---eeccc-CCCCCeee
Confidence            33333 5556776655 6689999999999999999999999998899888887766433333   67799 67999999


Q ss_pred             EEEeeCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh-cCCCccc
Q 014631          265 WLVTSDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK-EIPCITC  340 (421)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~~  340 (421)
                      .++..        +++.+.+.....   .+.+.|+.++++..+.|+....+.+.+..++..+..+.+...++ +++.+..
T Consensus       289 ~Vatt--------keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGD  360 (452)
T KOG1403|consen  289 AVATT--------KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGD  360 (452)
T ss_pred             EEecc--------HHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceec
Confidence            99985        578888876431   24578999999999998865555666666666655555555555 3333432


Q ss_pred             cCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          341 PRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      +  ..-|.|..+++-+...   +....+...+.++-+.++|++..-..  .++.+.|-+.  .++++.++.+..|.+++.
T Consensus       361 v--RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~ld~iLT  436 (452)
T KOG1403|consen  361 V--RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGLDEILT  436 (452)
T ss_pred             c--ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence            2  2336777776643221   11122345566666667888865221  1456666554  788888888888888775


Q ss_pred             Hh
Q 014631          416 RH  417 (421)
Q Consensus       416 ~~  417 (421)
                      -+
T Consensus       437 ~m  438 (452)
T KOG1403|consen  437 VM  438 (452)
T ss_pred             HH
Confidence            44

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.52  E-value=7.6e-11  Score=115.75  Aligned_cols=257  Identities=15%  Similarity=0.118  Sum_probs=161.6

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----C-----
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----P-----  132 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~-----  132 (421)
                      .++.+...+...+-+.+...|..+++...+++.+.+|+.+.+|.+.  ..=.+|+|||+|+...+....+    |     
T Consensus        95 ~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~  172 (608)
T TIGR03811        95 LMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKE  172 (608)
T ss_pred             CHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhh
Confidence            3444443333333343444565566778999999999999988653  3455788888887754433211    0     


Q ss_pred             -------------------------------------------C------CeEEEcCCCCcchHHHHhhcCce---eEee
Q 014631          133 -------------------------------------------G------ANILLPKPGFPLYEANARHTRLE---IRHF  160 (421)
Q Consensus       133 -------------------------------------------g------d~Vl~~~p~y~~~~~~~~~~g~~---~~~~  160 (421)
                                                                 |      -.++++...|+++..++...|..   ++.+
T Consensus       173 ~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V  252 (608)
T TIGR03811       173 VKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV  252 (608)
T ss_pred             ccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe
Confidence                                                       0      05888888899999999999985   7788


Q ss_pred             eccCCCCccCCHHHHHhhhcc----C--ceEEEEeCCCCCcccccCHHHHHHHHHHH---HhcCc--EEEEcccccccc-
Q 014631          161 DLLPEKGWEVDLDGLEALADE----N--TVAMVIVNPGNPCGNVFTYQQLQKIAEKA---RKLGI--MVISDEVYDHLT-  228 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~----~--~~~i~~~~p~nptG~~~~~~~l~~i~~~~---~~~~~--~li~De~~~~~~-  228 (421)
                      |++  +++.+|+++|++.+.+    +  +-+|+-+.++..+|.+   +++++|+++|   +++|+  ++++|.||+++. 
T Consensus       253 pvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~  327 (608)
T TIGR03811       253 PVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGR  327 (608)
T ss_pred             ecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccchhh
Confidence            875  4567999999887743    2  2335566778889999   7777777777   77887  699999999853 


Q ss_pred             --cCCC--Ccc----------------------------cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631          229 --FGST--PYV----------------------------RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ  276 (421)
Q Consensus       229 --~~~~--~~~----------------------------~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  276 (421)
                        +...  .+.                            .+..+..-+ -| .-.+||+ +.....+|.++++++.    
T Consensus       328 ~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~AD-SI-tvDpHK~-g~~Py~~G~ll~Rd~~----  400 (608)
T TIGR03811       328 AIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAE-SV-TIDPHKM-GYIPYSAGGIVIQDIR----  400 (608)
T ss_pred             hhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCce-EE-EeCcccc-cccCCCeEEEEEeCHH----
Confidence              1110  000                            011111111 13 3379999 5666789999998642    


Q ss_pred             HHHHHHHHhhhcc---------------cccCCchHH--HHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          277 ELRIVDSIKGYLN---------------ISSGPATFV--QGAVPQIFKNT--KEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       277 ~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                         +.+.+.....               .....+.+.  ..++..+++..  ...++.++..+..++++++.+.|.++
T Consensus       401 ---~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~  475 (608)
T TIGR03811       401 ---MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL  475 (608)
T ss_pred             ---HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence               2222211100               001122222  23333334332  45788888899999999999999873

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.51  E-value=2.1e-11  Score=115.92  Aligned_cols=237  Identities=15%  Similarity=0.115  Sum_probs=156.1

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG  167 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  167 (421)
                      +.+..+..|+.++.       ...-++++|++.++..++.+++.+||.|+++.++|-+.....-+.|+.++++....+..
T Consensus        72 i~eAqe~aA~~fgA-------d~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~  144 (557)
T COG1982          72 IKEAQELAARVFGA-------DHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPL  144 (557)
T ss_pred             HHHHHHHHHHHhCC-------CceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcc
Confidence            56888888888742       44678899999999999999999999999999999999999999999999887544332


Q ss_pred             ----ccCCHHHHHhhhcc--Cc-eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          168 ----WEVDLDGLEALADE--NT-VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       168 ----~~~d~e~l~~~~~~--~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                          .+++.+.+++.+.+  .. +.+++++|+. .|+++.   +++|++.+..+++++.+|+++....-..... +-...
T Consensus       145 ~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l-~~~~~  219 (557)
T COG1982         145 YGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPML-PESAL  219 (557)
T ss_pred             ccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccC-cchhh
Confidence                35799999886533  34 7788999987 789855   7788888889999999999997643111111 11111


Q ss_pred             CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHH---hhccchhHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI---FKNTKEDFFSKI  317 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~  317 (421)
                       ....+++..|.||.+ .+....+++-+.+. ...+.+.+-+.+....  +++|+.+..+++..+   ........+.+.
T Consensus       220 -~~~~~~~tqS~HK~l-~alSQaS~iHv~~~-~~~~~~r~nea~~~h~--STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~  294 (557)
T COG1982         220 -NGGADFVTQSTHKLL-AALSQASMIHVKDG-RAVNHERFNEALMMHQ--STSPSYPLMASLDVARMQEGNAGRELWQEV  294 (557)
T ss_pred             -hcCceEEEechhhhh-hhhhhhHHHhhCCC-ccCCHHHHHHHHHHHc--cCCchHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence             133468889999993 33333444544432 1221223333333222  235555555444332   111123333444


Q ss_pred             HHHHHHHHHHHHHHhhcCCCcccc
Q 014631          318 VDILRDTADICYDRIKEIPCITCP  341 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~  341 (421)
                      ....-+.++.+++.+.+++++.++
T Consensus       295 ~~~~i~~r~~~~~~~~~~~~~~~~  318 (557)
T COG1982         295 IDEAIDFRKALRRLINEIGFFPVL  318 (557)
T ss_pred             HHHHHHHHHHHHHHHHhcCCeeec
Confidence            555566777777777777666644

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.50  E-value=2e-11  Score=107.78  Aligned_cols=336  Identities=13%  Similarity=0.092  Sum_probs=212.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-cCCHHHHHHHHHHHhcCCC
Q 014631           61 RTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYL-TAGCKQAIQVILTVLARPG  133 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~g~~~al~~~~~~l~~~g  133 (421)
                      -....+.+|+-..+.+....+      |+..+-+.+++-...+...+-|+.+...-.|-+ .-+++.|+.++..++++|+
T Consensus        51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph  130 (477)
T KOG2467|consen   51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPH  130 (477)
T ss_pred             chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCC
Confidence            355788899988887643333      333444556665555555555553322222322 2345668888899999999


Q ss_pred             CeEEEcC---CCCcc--hHHHHhhcCce-----eEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHH
Q 014631          134 ANILLPK---PGFPL--YEANARHTRLE-----IRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       134 d~Vl~~~---p~y~~--~~~~~~~~g~~-----~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ++|+-.+   .+|-+  |..-.+...+.     -.++.++++.+ -+|.|.||+.... ++++|+ +..+ -....+   
T Consensus       131 ~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~frPk~ii-aG~S-aY~R~~---  204 (477)
T KOG2467|consen  131 ERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLFRPKLII-AGTS-AYSRLI---  204 (477)
T ss_pred             CeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhcCCcEEE-eccc-cchhhc---
Confidence            9988654   34422  22111222222     22234555544 5899999885433 556554 3222 112222   


Q ss_pred             HHHHHHHHHHhcCcEEEEcccc-cccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh-----
Q 014631          203 QLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ-----  276 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----  276 (421)
                      +..++.++|.+.|.+++.|.+| ++++..+.-+.++...+     |+..+.+|+  +.|.|.|.+.-+......+     
T Consensus       205 DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~D-----iVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g~  277 (477)
T KOG2467|consen  205 DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCD-----IVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQGK  277 (477)
T ss_pred             cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccc-----eeecccccc--ccCCcceeEEEeccCCcCCCCCCC
Confidence            3566667777889999999999 45555555444544333     778899998  6888999988754211110     


Q ss_pred             --HHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631          277 --ELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV  352 (421)
Q Consensus       277 --~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~  352 (421)
                        --++.+++.....  .-++|......+++.+|.......+...+++..++...+.+.|.+. |..++....+...+.+
T Consensus       278 ~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLv  356 (477)
T KOG2467|consen  278 EILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLV  356 (477)
T ss_pred             cceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEE
Confidence              0134555544432  2357777788888888887667788888999999999999999988 8886666666777777


Q ss_pred             ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----CCeEEEEec------CCHHHHHHHHHHHHHHHH
Q 014631          353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-----KNWLRITFA------IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~iRi~~~------~~~e~l~~~~~~l~~~~~  415 (421)
                      ++....+     +..-+++.|+..+|.+.--..++.     ++.+|+.-.      ..++|+++..+-|.++++
T Consensus       357 DLr~~G~-----dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~  425 (477)
T KOG2467|consen  357 DLRPKGV-----DGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK  425 (477)
T ss_pred             eccccCC-----chHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence            8876533     345567777777887755444443     688999754      346899998888887764

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.32  E-value=2e-09  Score=97.68  Aligned_cols=314  Identities=17%  Similarity=0.167  Sum_probs=195.4

Q ss_pred             CCCCCCC---CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC-HHHHH---HHHHHHhc-CCC----CeEEEcCCCCcch
Q 014631           79 FDCYSPS---VGILPARRAIADYLNSELPCKLSPDDVYLTAG-CKQAI---QVILTVLA-RPG----ANILLPKPGFPLY  146 (421)
Q Consensus        79 ~~~y~~~---~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g-~~~al---~~~~~~l~-~~g----d~Vl~~~p~y~~~  146 (421)
                      .+-|.|.   +|+.++-..+.+||.+--    .-+.|.+.+. |.++=   .++++..- ..|    +.+++++..|...
T Consensus        95 iHP~~pe~~vqG~l~li~~Lq~~L~~IT----G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN  170 (496)
T COG1003          95 IHPFQPEEQVQGYLELIYELQEWLKEIT----GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN  170 (496)
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHhc----CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence            4455543   577888888888987633    3466766543 22222   22333331 222    6899999999988


Q ss_pred             HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631          147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH  226 (421)
Q Consensus       147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  226 (421)
                      -..+...|.+++.|+.+.+  ..+|+|+|++.+.+++.++.+++|+. -|+.  .+.+++|+++.+++|..+..|.+--.
T Consensus       171 PASAam~G~~VV~V~~~~~--G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlN  245 (496)
T COG1003         171 PASAAMAGFKVVVVKCDEN--GNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLN  245 (496)
T ss_pred             hhhHhhcCceEEEEecCCC--CCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchh
Confidence            8899999999999997644  45999999999999999999999985 5655  36799999999999999999988654


Q ss_pred             cccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEEEeeCCCcchhHHHHHHHHhh----------------
Q 014631          227 LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGILQELRIVDSIKG----------------  286 (421)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~----------------  286 (421)
                      ...+-..+   ..++.  . |+=..++|+|+.|    |...|=|.+..        .+...+-.                
T Consensus       246 A~vG~~rP---Gd~G~--D-V~HlNLHKTF~iPHGGGGPG~GPvgVk~--------~L~pfLP~p~~~~~~~~y~~~~~~  311 (496)
T COG1003         246 AIVGLARP---GDMGF--D-VVHLNLHKTFCIPHGGGGPGAGPVGVKA--------HLAPFLPGPVVYHDVGEYRLDYDG  311 (496)
T ss_pred             hhhccccc---ccccc--c-eEEeecccccccCCCCCCCCCCceehHh--------hccccCCCCcccCCCccccccCCC
Confidence            33221111   12222  2 3333688988754    44455555531        11111100                


Q ss_pred             hc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc--eeEEEEecCccccc
Q 014631          287 YL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG--SMFVMVKLNLSLLE  360 (421)
Q Consensus       287 ~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~--~~~~~~~~~~~~~~  360 (421)
                      ..    ......|......+..++.....+++.+.-+..--+.+++..+|+..  +.+++.+..  ..=+.+........
T Consensus       312 ~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~  389 (496)
T COG1003         312 KKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKE  389 (496)
T ss_pred             CccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhh
Confidence            00    00011233333344445544445777777777778899999999863  443334442  11122223211111


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCC--CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVG--MKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .+-...++..+| ..+|+.- |-..|-  ..+.+-|=+.  -+++++|++++++.++.++.++
T Consensus       390 ~Gv~~~DvAKrL-lD~GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~  450 (496)
T COG1003         390 TGVRALDVAKRL-LDYGFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA  450 (496)
T ss_pred             cCCcHHHHHHHH-HhcCCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            112466777776 4578865 444454  4677777776  5679999999999998877643

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.26  E-value=1.2e-08  Score=104.04  Aligned_cols=297  Identities=13%  Similarity=0.153  Sum_probs=180.8

Q ss_pred             CCcHHHHHHHHHHHhcCC-CCCCCCCC-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc
Q 014631           61 RTTPVAADAVVDAVRSAE-FDCYSPSV-----G----ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA  130 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~-~~~y~~~~-----g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~  130 (421)
                      ..|+.+.+.+.+   ++. +..|.|.+     |    +-++...++++.      +.+..+.-+..++|++-++++.+..
T Consensus        77 ~~p~~i~r~v~~---~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~  147 (939)
T TIGR00461        77 ILPPVIQRNLLE---NPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFN  147 (939)
T ss_pred             cCChHHHHHHHh---CchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHH
Confidence            356666644443   332 34555543     3    234555566665      4667788888898888887776642


Q ss_pred             ---CCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          131 ---RPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       131 ---~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                         +++++|++++..|+.+...++    ..|.+++.+          |++++++.+  ++.++++.+|+. .|.+   ++
T Consensus       148 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~~~~v~~q~Pn~-~G~i---ed  211 (939)
T TIGR00461       148 VSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--DVFGCLLQYPAT-DGSI---LD  211 (939)
T ss_pred             hhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--CEEEEEEECCCC-CeEE---ec
Confidence               234899999999988765544    667777765          344565554  466777778875 8999   68


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC----CCceEEEEEeeCCCcchhHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV----PGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      +++|.++++++|.+++++.-...+.    ...+...++.+   |++++ +|.||.    +|.-.|++.+++        +
T Consensus       212 ~~~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaD---i~vg~-~q~fg~p~g~GGP~aG~~a~~~--------~  275 (939)
T TIGR00461       212 YKQLIDALHSHKSLVSVAADLMALT----LLTPPGHYGAD---IVLGS-SQRFGVPMGYGGPHAAFFAVKD--------E  275 (939)
T ss_pred             HHHHHHHHHHcCCEEEEEechHHhC----CcCCHHHcCCc---EEeeC-CCccCCCCCCCCCceeeeeecH--------h
Confidence            9999999999999999854332221    11122333333   55553 344454    233467777643        1


Q ss_pred             HHHHHh-------------------------hhcccccCCchHHHH-----HHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631          280 IVDSIK-------------------------GYLNISSGPATFVQG-----AVPQIFKNTKEDFFSKIVDILRDTADICY  329 (421)
Q Consensus       280 ~~~~~~-------------------------~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  329 (421)
                      +.+.+-                         ..+..-.++|.....     ++..++......++.++.++...+..++.
T Consensus       276 l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~  355 (939)
T TIGR00461       276 YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILA  355 (939)
T ss_pred             hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence            222210                         000000122222111     12222333456889999999999999999


Q ss_pred             HHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631          330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       330 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~  407 (421)
                      +.|++. |+++. .+  .+|-.+.+....    .+..++...+ .++||.+...    ..+.+++|+.  ++++||+.++
T Consensus       356 ~~L~~~-G~~~~-~~--~fF~~~~v~~~~----~~~~~i~~~~-~~~gi~l~~~----~~~~i~~s~~E~~t~~di~~l~  422 (939)
T TIGR00461       356 NGLEND-PHELI-NK--TWFDTLTVKVGN----GISSELLKAA-EEFNINLRAV----DTTTVGIALDETTTKADVENLL  422 (939)
T ss_pred             HHHHhC-CCccc-CC--CccceEEEEeCC----CCHHHHHHHH-HHCCCeeeec----CCCEEEEEeecCCCHHHHHHHH
Confidence            999984 88843 33  445444443210    1355666555 6679997652    2368999998  8999999999


Q ss_pred             HHHH
Q 014631          408 GRIK  411 (421)
Q Consensus       408 ~~l~  411 (421)
                      +.+.
T Consensus       423 ~~~~  426 (939)
T TIGR00461       423 KVFD  426 (939)
T ss_pred             HHhc
Confidence            9984

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.23  E-value=3.2e-11  Score=97.45  Aligned_cols=116  Identities=22%  Similarity=0.367  Sum_probs=85.6

Q ss_pred             hhhHHHHHHHHHHh-ccc-cCCCCeeeccCCCCCC-------------CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCC
Q 014631           24 TLTVRSALTIIKQN-LKE-NDPRPIIPLGHGDPSA-------------FPCFRTTPVAADAVVDAVRSAEFDCYSPSVGI   88 (421)
Q Consensus        24 ~~~~~~~~~~~~~~-~~~-~~~~~~i~l~~g~~~~-------------~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~   88 (421)
                      .++....+..+.+. ++. .....+|+|+.+.-.+             .+.+..++.+.+++.+.      ..|.+..|.
T Consensus        21 ~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~   94 (153)
T PLN02994         21 ASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGL   94 (153)
T ss_pred             CchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCc
Confidence            44555555555543 333 2355688888775211             02233444444444442      348888999


Q ss_pred             HHHHHHHHHHHhhhCC--CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc
Q 014631           89 LPARRAIADYLNSELP--CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL  145 (421)
Q Consensus        89 ~~l~~~ia~~l~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~  145 (421)
                      ++||+++|+|+.+.+|  +.+++++|++|+|+++++..++.++++|||.|++++|.|++
T Consensus        95 ~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~  153 (153)
T PLN02994         95 ANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA  153 (153)
T ss_pred             HHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence            9999999999999888  67889999999999999999999999999999999999974

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.17  E-value=3.1e-08  Score=92.70  Aligned_cols=273  Identities=18%  Similarity=0.235  Sum_probs=143.1

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh---cCCCCeEEEcCCCCcchHHH----HhhcCceeEeeec
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL---ARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDL  162 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~  162 (421)
                      ++...++++.      +.+..+.-+-.+++.+-..+..+.   .+..++|+++...|+.+...    +...|.+++.++.
T Consensus       114 e~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~  187 (429)
T PF02347_consen  114 EYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL  187 (429)
T ss_dssp             HHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B
T ss_pred             HHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc
Confidence            4555555655      244445567777777666655443   23346999999999988764    4456888888876


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                      +.+..  .|        ++++.++++.+|++ .|.+   +++++|.++++++|.++++ .+.-. ...+  ..+-..++.
T Consensus       188 ~~~~~--~d--------~~~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad~~-aL~~--l~~Pge~GA  249 (429)
T PF02347_consen  188 DEDGT--TD--------DDDTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GADPN-ALGG--LKSPGEYGA  249 (429)
T ss_dssp             BTTCS--B---------STTEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CGGCC-GCCT--C--GGGGT-
T ss_pred             cccCC--cc--------ccCeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ecCHH-HHhC--cCChhhcCc
Confidence            53322  23        56788999999996 8888   7799999999999999886 33211 1112  112234444


Q ss_pred             CCCEEEEcccccccCCC----CceEEEEEeeCCCcchhHHHHHHH----------------------------Hhhhccc
Q 014631          243 TVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGILQELRIVDS----------------------------IKGYLNI  290 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  290 (421)
                      +   |++++ +|.||.|    |.-+|++.+++.        +.+.                            +++.+..
T Consensus       250 D---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~--------l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt  317 (429)
T PF02347_consen  250 D---IVVGE-HQTFGIPMGFGGPGAGFFAVRED--------LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT  317 (429)
T ss_dssp             S---EEEEC-CTTTT---CCC-S--EEEEE-GG--------GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred             c---EEeeC-CCCCcccCCCCCCCeeeEEEhhh--------hhhhCCCceecccccccccceeeeccccccccccccchh
Confidence            3   65665 7777753    556788887542        1121                            1122111


Q ss_pred             -ccCCchHH-HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHH
Q 014631          291 -SSGPATFV-QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF  368 (421)
Q Consensus       291 -~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (421)
                       ..+.+... ..++..++.....+++.+..++...+..++.+.|+++.++. +  ....+|-++....       .. .-
T Consensus       318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~--~~~~f~e~v~~~~-------~~-~~  386 (429)
T PF02347_consen  318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-F--DNPFFFEFVVVFS-------KD-KE  386 (429)
T ss_dssp             T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-S--SSSSBSSEEEEES-------S--HH
T ss_pred             hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c--CCCCceeeeeecC-------Cc-HH
Confidence             11222222 22333444444578999999999999999999999873333 2  2223433332221       11 12


Q ss_pred             HHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631          369 ALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       369 ~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      +.+++ ++++.-.-+..+...+.+-+|+.  +++++|+++++.|
T Consensus       387 ~~~l~-~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  387 VEELL-KRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             HHHHH-HTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred             HHHHH-HHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence            22232 22332211111222458888887  7899999998864

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=99.15  E-value=1.1e-07  Score=87.14  Aligned_cols=322  Identities=11%  Similarity=0.082  Sum_probs=185.5

Q ss_pred             CCCCCCCHHHHHHHHHHHhhhCCCCC--------CCCcEEEcCCHHHHHHHHHHH-h------cCCC-----------C-
Q 014631           82 YSPSVGILPARRAIADYLNSELPCKL--------SPDDVYLTAGCKQAIQVILTV-L------ARPG-----------A-  134 (421)
Q Consensus        82 y~~~~g~~~l~~~ia~~l~~~~~~~~--------~~~~i~~~~g~~~al~~~~~~-l------~~~g-----------d-  134 (421)
                      ...++...||+..+-+|+++..+.+.        +.-.++. .+++++...++-+ -      .+.+           + 
T Consensus       105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ-~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l  183 (511)
T KOG0628|consen  105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQ-GTASESVLVALLAARTEKIEEIKSRPPELHESSVLARL  183 (511)
T ss_pred             eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEe-cCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence            34556689999999999998776532        2223443 3444554444322 1      1111           2 


Q ss_pred             eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCc-----eEEEEeCCCCCcccccCHHHHHHHHH
Q 014631          135 NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENT-----VAMVIVNPGNPCGNVFTYQQLQKIAE  209 (421)
Q Consensus       135 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~-----~~i~~~~p~nptG~~~~~~~l~~i~~  209 (421)
                      .+.+++.+|++...++...|.+.+.++.+.  +++++.+.|++++.++.     ..+++.+. ..||. ...+++.+|..
T Consensus       184 V~Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~-ca~D~l~elg~  259 (511)
T KOG0628|consen  184 VAYCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSS-CAFDELEELGP  259 (511)
T ss_pred             eEEecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCccc-cccccHHHhcc
Confidence            345578999999999999999988888643  88999999999886532     22222222 22332 34489999999


Q ss_pred             HHHhcCcEEEEcccccccccCCCCcccc-cccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh----HHHHHH-H
Q 014631          210 KARKLGIMVISDEVYDHLTFGSTPYVRM-GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ----ELRIVD-S  283 (421)
Q Consensus       210 ~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~~~~~-~  283 (421)
                      +|+++|+++++|.+|++..+.-+.+..+ ..++.-+  -+-...||+ ++--+-|..+.+.+...+..    ++...+ .
T Consensus       260 Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~  336 (511)
T KOG0628|consen  260 VCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD--SFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHA  336 (511)
T ss_pred             hhhhcCEEEEeehhhccccccCHHHHHHhhcchhhc--cccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcch
Confidence            9999999999999999765443322211 1111111  223456787 45556666666654311100    010111 0


Q ss_pred             Hhhhc-ccccCCchHH--HHHHHH--HhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631          284 IKGYL-NISSGPATFV--QGAVPQ--IFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL  358 (421)
Q Consensus       284 ~~~~~-~~~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  358 (421)
                      ..... .+-...-++.  ..++..  .++...-+.+.+..++.-++.+.+.+.+.+-+.++++.+..-| .+.+++....
T Consensus       337 ~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lg-LvcFRlk~~N  415 (511)
T KOG0628|consen  337 YQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILG-LVCFRLKGDN  415 (511)
T ss_pred             hhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccc-eeEEeecCCc
Confidence            00000 0000011111  112222  2232223445555555556666666666666678755333334 3334554321


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~  417 (421)
                          ...+.++.++-....|.+.|.+. ...=.+|++++   ++.++++++-+.|.+..+++
T Consensus       416 ----~~ne~Ll~~in~~g~i~l~~~~l-~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l  472 (511)
T KOG0628|consen  416 ----EINEALLNRLNSSGRIHLVPASL-HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL  472 (511)
T ss_pred             ----HHHHHHHHHHHhcCcEEEEEeee-cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence                23667888887778888888653 22335899987   67899999999999888774

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=99.11  E-value=8.6e-08  Score=85.86  Aligned_cols=330  Identities=14%  Similarity=0.118  Sum_probs=182.5

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC----CC--CCHHHHHHHHHHHhhhCCCCCCCCcEEE-cC
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP----SV--GILPARRAIADYLNSELPCKLSPDDVYL-TA  116 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~----~~--g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~  116 (421)
                      +.+.||+.| |+     -.|+++++.+++.+......+++.    .+  -...+.+...+.+.+.++++-+- +|+| -.
T Consensus         4 ~~~~nFsaG-Pa-----~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y-~VlflqG   76 (365)
T COG1932           4 PRVYNFSAG-PA-----ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDY-KVLFLQG   76 (365)
T ss_pred             CCCCCCCCC-cc-----cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCc-eEEEEcC
Confidence            457889988 33     356677777766655422112211    11  12333333334444445555433 4555 45


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcch-HHHHhhcCceeEeeec-cCCCCcc--CCHHHHHhhhccCceEEEEeCCC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLY-EANARHTRLEIRHFDL-LPEKGWE--VDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~~~~-~~~~~~~--~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      |+|.....+...|+.....-.+....|... ..-++..+-.+..... ..+.+++  ++++.+.  +.++..-|.+|.-.
T Consensus        77 Gat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~Ne  154 (365)
T COG1932          77 GATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNE  154 (365)
T ss_pred             ccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCC
Confidence            678888888888875443202222233221 2333444432111111 1112222  2333322  23332224444444


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      .-+|+.++.  ...+.     .+.++|.|....-+.    ...++..++     ++..+-.|.+|..|  ++.++++   
T Consensus       155 Ti~Gv~v~~--~p~~~-----~~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr---  213 (365)
T COG1932         155 TISGVEVPE--LPDIG-----SDGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVR---  213 (365)
T ss_pred             cccceEccC--CCCCC-----CCceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEc---
Confidence            466887652  21111     127888897765543    233444444     55668999999888  7888885   


Q ss_pred             cchhHHHHHHHHhhh--------------cccccCCchHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          273 GILQELRIVDSIKGY--------------LNISSGPATFVQGAVPQIFKNT-KEDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                           +++.++.+..              .....+|+.++.+.....++-. ...+++...++.+++.+.+++.+.+. +
T Consensus       214 -----~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~  287 (365)
T COG1932         214 -----PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-D  287 (365)
T ss_pred             -----HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-C
Confidence                 3555555442              1123466667766665555442 25778888999999999999999986 4


Q ss_pred             ccc-cCCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          338 ITC-PRKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       338 ~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      +.. ...+.  .-+-+.+.+....     -+..|+.+ ++++|+...-|+  ...+.+|+++.  .+.|+++.+++-++.
T Consensus       288 fy~~~v~~~~RS~mnV~f~~~~~~-----ld~~fv~e-ae~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~fm~~  359 (365)
T COG1932         288 FYRNLVAKANRSRMNVTFTLVDAE-----LDKGFVAE-AEAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTDFMDW  359 (365)
T ss_pred             ccccccchhhccceeEEEEcCcHH-----HHHHHHHH-HHHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHHHHHH
Confidence            331 11222  2344555555432     24556655 467788887773  23456999997  678999999999988


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      +.+++
T Consensus       360 f~~~~  364 (365)
T COG1932         360 FEETY  364 (365)
T ss_pred             HHHhh
Confidence            87654

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.06  E-value=2e-08  Score=89.85  Aligned_cols=155  Identities=18%  Similarity=0.279  Sum_probs=99.7

Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcC-CCCcchHHHH----------hhcCceeEeeeccCCCCccCCHHHHHhhhccCce
Q 014631          116 AGCKQAIQVILTVLARPGANILLPK-PGFPLYEANA----------RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV  184 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~----------~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~  184 (421)
                      -+||+|+..++..+++|||+++... .-|.......          +..|.+...+++.++  ..+|.|.+++.+++++|
T Consensus        79 vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~d--g~~D~~~i~~~~~~~tk  156 (403)
T PF06838_consen   79 VSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTED--GTIDWEAIKKALKPNTK  156 (403)
T ss_dssp             -SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TT--SSB-HHHHHHHHHTTEE
T ss_pred             cchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCC--CCcCHHHHHHhhccCce
Confidence            4789999999999999999998653 3354444333          456777788887654  45999999999999999


Q ss_pred             EEEEeCC-CCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631          185 AMVIVNP-GNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW  261 (421)
Q Consensus       185 ~i~~~~p-~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  261 (421)
                      .+++--- ...+=..++.++++++++.+|+  .++++++|.+|++|+-.-++  .  ..+.+   ++.+|+=|.-| .|+
T Consensus       157 ~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP--~--~vGAD---l~aGSLIKNpG-Ggi  228 (403)
T PF06838_consen  157 MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEP--T--EVGAD---LMAGSLIKNPG-GGI  228 (403)
T ss_dssp             EEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G--G--GGT-S---EEEEETTSGGG-TTT
T ss_pred             EEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCc--c--ccchh---heeccceeCCC-CCc
Confidence            8877533 4444456788999999999995  47899999999998732221  1  33333   88999999954 343


Q ss_pred             --eEEEEEeeCCCcchhHHHHHHHHhhhc
Q 014631          262 --RLGWLVTSDPSGILQELRIVDSIKGYL  288 (421)
Q Consensus       262 --r~G~~~~~~~~~~~~~~~~~~~~~~~~  288 (421)
                        --||++++        +++.++.....
T Consensus       229 AptGGYIaGr--------~~lVe~~a~RL  249 (403)
T PF06838_consen  229 APTGGYIAGR--------KDLVERAAYRL  249 (403)
T ss_dssp             -SS-EEEEES--------HHHHHHHHHHH
T ss_pred             cCcCCEEech--------HHHHHHHHhhh
Confidence              35999985        57777765554

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=99.03  E-value=2.7e-07  Score=81.95  Aligned_cols=314  Identities=17%  Similarity=0.154  Sum_probs=193.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC-----CCCeEEEcCCCCc-chHHHHhhcC
Q 014631           81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR-----PGANILLPKPGFP-LYEANARHTR  154 (421)
Q Consensus        81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~gd~Vl~~~p~y~-~~~~~~~~~g  154 (421)
                      .|..+.++-.|.+++.+.++        -+.++-|+-|..|=++++..+++     ||.+.++++..|. ......+..|
T Consensus        74 AYagsrs~~~L~~avkdifG--------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng  145 (471)
T COG3033          74 AYAGSRSYYALADAVKDIFG--------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING  145 (471)
T ss_pred             hhcccccHHHHHHHHHHhcC--------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence            68888888999999999873        35677788888888888877765     5555566666665 4466677788


Q ss_pred             ceeEeeeccCCC--------CccCCHHHHHhhhcc----CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631          155 LEIRHFDLLPEK--------GWEVDLDGLEALADE----NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISD  221 (421)
Q Consensus       155 ~~~~~~~~~~~~--------~~~~d~e~l~~~~~~----~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D  221 (421)
                      ..++.++++...        ...+|++.|++++++    +...|+++-- |...|+..|.+.+++..++|++|++.++.|
T Consensus       146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D  225 (471)
T COG3033         146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD  225 (471)
T ss_pred             CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence            887777654221        135799999998864    4445544444 446789999999999999999999999999


Q ss_pred             cccc-ccccC------CCCccccccc-----CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc
Q 014631          222 EVYD-HLTFG------STPYVRMGVF-----GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN  289 (421)
Q Consensus       222 e~~~-~~~~~------~~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  289 (421)
                      .+-. .-.+-      |-.-+++...     ..-|  -...|.-|- ++..+ .|+++.+++. .+   ++...++....
T Consensus       226 a~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD--~~~mS~KKD-~lvnm-GGfl~~~D~~-~f---Dvy~~~~~~~V  297 (471)
T COG3033         226 AARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD--GCTMSAKKD-GLVNM-GGFLCFKDDS-FF---DVYEECRTLVV  297 (471)
T ss_pred             hhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh--hheeecccc-ceecc-ccEEEecCcc-HH---HHHHHHHhheE
Confidence            7632 11110      0001111111     1111  123355566 54321 2666665532 22   34455544332


Q ss_pred             ------cccCCchHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc--cc
Q 014631          290 ------ISSGPATFVQGAVPQIFKN-TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LE  360 (421)
Q Consensus       290 ------~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~  360 (421)
                            ..++.+.-...+++..|.+ ...+|+..+..+.+    ++.+.|++. |+. +..|.||.-+++......  .+
T Consensus       298 ~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~----YL~~~l~~~-GVp-i~~paGGHavfvda~~~lphip  371 (471)
T COG3033         298 VQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQ----YLADGLEEA-GVP-IVQPAGGHAVFVDAGKFLPHIP  371 (471)
T ss_pred             eeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHH----HHHHHHHhc-CCe-eEecCCCceEEeehhhhcCCCC
Confidence                  1223333334444444543 22567776665554    455666665 887 447888887777643211  00


Q ss_pred             -CCCChHHHHHHHHhhcCeeEEeCCCC--CC-----------CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631          361 -GISDDMEFALQLAKEESVIVLPGMAV--GM-----------KNWLRITFA---IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       361 -~~~~~~~~~~~ll~~~gv~v~~g~~~--~~-----------~~~iRi~~~---~~~e~l~~~~~~l~~~~~~  416 (421)
                       .......+..+|-++.||-.+--..|  +.           -.-+|+++.   .+.+-++.+++.++++.+.
T Consensus       372 ~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~  444 (471)
T COG3033         372 AEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN  444 (471)
T ss_pred             hhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence             11135678888889999976543332  11           146999997   5789999999999887754

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.02  E-value=6.9e-08  Score=88.22  Aligned_cols=223  Identities=16%  Similarity=0.120  Sum_probs=147.7

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCC--HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGI--LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL  138 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~--~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~  138 (421)
                      ...+++.+++.+.+.......|.-..|.  ..+. .++..+   ++ -...+.++++++.+.|+.+++.++.++ .+|++
T Consensus        38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~---~~-~~~aea~~ivnnn~aAVll~~~al~~~-~EvVi  111 (395)
T COG1921          38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELL---CG-LTGAEAAAIVNNNAAAVLLTLNALAEG-KEVVV  111 (395)
T ss_pred             cCCHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHH---hc-ccchhheeeECCcHHHHHHHHhhhccC-CeEEE
Confidence            4568888999888876533344333322  2333 333333   22 234678999999999999999888764 45544


Q ss_pred             c-----CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631          139 P-----KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK  213 (421)
Q Consensus       139 ~-----~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~  213 (421)
                      .     +++++......+..|++.+.+...  +  .-...+++.++.+++..++-+.-+|- |.. ..=.+++++++|++
T Consensus       112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~t--n--~t~~~d~~~AIne~ta~llkV~s~~~-~f~-~~l~~~~l~~ia~~  185 (395)
T COG1921         112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTT--N--RTHLKDYELAINENTALLLKVHSSNY-GFT-GMLSEEELVEIAHE  185 (395)
T ss_pred             EccccccCCCCChhHHHHHcCCEEEEeccc--C--cCCHHHHHHHhccCCeeEEEEeeccc-ccc-ccccHHHHHHHHHH
Confidence            3     157778899999999998887632  2  25788999999999998876655542 322 11236778899999


Q ss_pred             cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-ccc
Q 014631          214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISS  292 (421)
Q Consensus       214 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  292 (421)
                      +|+++++|.+.+...............+.+   ++++|-.|.+  .|.+-|.+++.        +++++++++... ...
T Consensus       186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKll--gGPqaGii~Gk--------KelI~~lq~~~l~Ral  252 (395)
T COG1921         186 KGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKLL--GGPQAGIIVGK--------KELIEKLQSHPLKRAL  252 (395)
T ss_pred             cCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchhc--CCCccceEech--------HHHHHHHHhhhhhhhh
Confidence            999999999987754311222222233333   7788999995  56668999984        678888877643 223


Q ss_pred             CCchHHHHHHHHHhhc
Q 014631          293 GPATFVQGAVPQIFKN  308 (421)
Q Consensus       293 ~~~~~~~~~~~~~l~~  308 (421)
                      -......+++.++|+.
T Consensus       253 rv~K~tla~l~~aLe~  268 (395)
T COG1921         253 RVDKETLAALEAALEL  268 (395)
T ss_pred             hcCcHhHHHHHHHHHH
Confidence            4555666666666654

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=99.00  E-value=6.6e-08  Score=87.63  Aligned_cols=315  Identities=13%  Similarity=0.115  Sum_probs=176.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-------cCCC-----CeE-EEcCCCCcchH
Q 014631           81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-------ARPG-----ANI-LLPKPGFPLYE  147 (421)
Q Consensus        81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-------~~~g-----d~V-l~~~p~y~~~~  147 (421)
                      .|.......-.++.+-....+-.|+....+.|+--.|+.+.+..+.-+-       ...|     +-| .+++.+|++..
T Consensus       132 TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~  211 (510)
T KOG0629|consen  132 TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK  211 (510)
T ss_pred             eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH
Confidence            4544444334444444444444555555556665555555555443221       1122     333 44678899999


Q ss_pred             HHHhhcCce---eEeeeccCCCCccCCHHHHHhhhcc-Cce-EE-EEeCC---CCCcccccCHHHHHHHHHHHHhcCcEE
Q 014631          148 ANARHTRLE---IRHFDLLPEKGWEVDLDGLEALADE-NTV-AM-VIVNP---GNPCGNVFTYQQLQKIAEKARKLGIMV  218 (421)
Q Consensus       148 ~~~~~~g~~---~~~~~~~~~~~~~~d~e~l~~~~~~-~~~-~i-~~~~p---~nptG~~~~~~~l~~i~~~~~~~~~~l  218 (421)
                      .++...|..   .+.++.+  ..+.+++++||+.+.. +.+ .+ ++.+.   +..-|..   ++|..|+++|.+|++++
T Consensus       212 kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWm  286 (510)
T KOG0629|consen  212 KAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWM  286 (510)
T ss_pred             HHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEE
Confidence            999999954   4445433  3457999999986632 111 11 33333   4455666   88999999999999999


Q ss_pred             EEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc---------
Q 014631          219 ISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL---------  288 (421)
Q Consensus       219 i~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~---------  288 (421)
                      ++|.++++.. ........+.....-+  -+.-+.+|. ....+.|+..+.+.+.       +.+++.+..         
T Consensus       287 HvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~-~gaplqCsa~l~r~~g-------ll~~Cn~~~A~YLFq~dK  356 (510)
T KOG0629|consen  287 HVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKL-MGAPLQCSAFLTREEG-------LLQRCNQMSAIYLFQQDK  356 (510)
T ss_pred             EeecccccccccChhhHhhccCccccC--ceeecHHHh-hcCcchhhHHHHHHHH-------HHHhhcccchhhhhccCc
Confidence            9999998733 2222222222222221  122378899 4567888888775322       333332211         


Q ss_pred             cc---ccCCchHHHHH-------HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC--CCceeE-EEEecC
Q 014631          289 NI---SSGPATFVQGA-------VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK--PEGSMF-VMVKLN  355 (421)
Q Consensus       289 ~~---~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~--~~~~~~-~~~~~~  355 (421)
                      .+   .-+..-..|..       +-..++.....++++..+++-++++++.+.+++.+++..+..  |+..++ +|. +|
T Consensus       357 ~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~-vp  435 (510)
T KOG0629|consen  357 FYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWY-VP  435 (510)
T ss_pred             eeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeecc-Cc
Confidence            00   11222233332       222233334577888899999999999999998877543323  453322 332 22


Q ss_pred             cccccCCCC-----------hHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec---CCHHHHHHHHHHHHHH
Q 014631          356 LSLLEGISD-----------DMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA---IEPSALEEGLGRIKAF  413 (421)
Q Consensus       356 ~~~~~~~~~-----------~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~---~~~e~l~~~~~~l~~~  413 (421)
                      .. +.+...           ...+-..++ +.|..+..-...+. ++.+|+-++   .+.++++.+++.|..+
T Consensus       436 ~~-lR~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl  506 (510)
T KOG0629|consen  436 PS-LRGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL  506 (510)
T ss_pred             hH-hccCcccchhhhHHHhhCcHHHHHHH-hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence            21 111111           112233333 34666654443333 568999887   3678999999988765

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.89  E-value=8e-07  Score=81.34  Aligned_cols=288  Identities=12%  Similarity=0.100  Sum_probs=151.7

Q ss_pred             CcEEEcCCHH-HHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC-ccCCHHHHHhhhc---cC
Q 014631          110 DDVYLTAGCK-QAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG-WEVDLDGLEALAD---EN  182 (421)
Q Consensus       110 ~~i~~~~g~~-~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~~~---~~  182 (421)
                      ...++++-+| .++.+.+.++.  ..++.|+.+.-.+.+...++...|.+++.++...+.+ ...|.+.+++.++   +.
T Consensus        75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~  154 (389)
T PF05889_consen   75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD  154 (389)
T ss_dssp             CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred             cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence            4456665544 34444455553  3568999998888888899999999999988543322 3346677777664   35


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc---ccCCCCCEEEEcccccccCCC
Q 014631          183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG---VFGSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~---~~~~~~~~i~~~s~sK~~~~~  259 (421)
                      ....+++.++.-.+...  +++++|+++|++||+..|+..||+.-...  ....+.   ..+.  -.+++.|+-|-|..|
T Consensus       155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~--~~~~i~~a~~~GR--vda~vqS~dkNF~VP  228 (389)
T PF05889_consen  155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSK--CMHLIQQAWRVGR--VDAFVQSTDKNFMVP  228 (389)
T ss_dssp             GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH--HHHHHHHHHHHST--CSEEEEEHHHHHCEE
T ss_pred             CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHH--HHHHHHHHHhcCC--cceeeeecCCCEEec
Confidence            56667877765455551  56999999999999999999999861100  000000   0111  116788999998654


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh----cC
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK----EI  335 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~  335 (421)
                       ..-+.+..++       +.++..+......- ....+........+.. ....+........+...++.++|+    +.
T Consensus       229 -vGgai~As~~-------~~~i~~vs~~YpGR-as~sp~ld~~itLl~L-G~~g~~~ll~~r~~~f~~l~erl~~~aee~  298 (389)
T PF05889_consen  229 -VGGAIMASFD-------PSGILAVSKEYPGR-ASASPSLDLFITLLSL-GCTGYGALLKERKASFPYLKERLKKWAEEV  298 (389)
T ss_dssp             -SSHEEEEESS-------HHHHHHHHHTSHSH-BTSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -CCCcEEEecC-------HHHHHHHHHHhhhh-hhcccchHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             2235555543       45666665544221 1111222233333332 222333333333344444444433    23


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCee----EEeCCCC-------CCCCeEEEEe--cCCHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI----VLPGMAV-------GMKNWLRITF--AIEPSA  402 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~----v~~g~~~-------~~~~~iRi~~--~~~~e~  402 (421)
                       +-.+...|.+...+.+.++....... ...-++-..|..+||.    |.++..+       ++..++-++.  +.++||
T Consensus       299 -~e~ll~~p~N~is~a~tl~~l~~~~~-k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~ee  376 (389)
T PF05889_consen  299 -GERLLETPRNHISMAFTLDTLYEISQ-KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREE  376 (389)
T ss_dssp             -TEEBSSSTT-SSEEEEE-TTCCTCCS-SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHH
T ss_pred             -hhhhcCCCCCCeeEEEECccchhhcc-chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHH
Confidence             22223345554444455543211000 2344555666777774    3333221       1236777754  489999


Q ss_pred             HHHHHHHHHHHHH
Q 014631          403 LEEGLGRIKAFCQ  415 (421)
Q Consensus       403 l~~~~~~l~~~~~  415 (421)
                      ++.++++|+++++
T Consensus       377 vd~~v~rL~k~i~  389 (389)
T PF05889_consen  377 VDYFVKRLDKIIK  389 (389)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999874

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=98.84  E-value=1.1e-06  Score=77.94  Aligned_cols=218  Identities=15%  Similarity=0.141  Sum_probs=118.0

Q ss_pred             CHHHHHhhhc-----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc--cC
Q 014631          171 DLDGLEALAD-----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV--FG  241 (421)
Q Consensus       171 d~e~l~~~~~-----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~  241 (421)
                      .++++|+++.     +.+.+.+++.| +...|- -.|++..++|.+++++||+.+|+||++.+.+.+|. ++....  ++
T Consensus       254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk-~WaHehw~l~  332 (484)
T KOG1405|consen  254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGK-FWAHEHWNLD  332 (484)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCc-eeeehhcCCC
Confidence            4566666553     23556677888 666664 46889999999999999999999999998765553 333333  33


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccch-hHHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDI  320 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~  320 (421)
                      ....++   +|||-|..+    ||..-  ++..-     -+..+.+ +.+ +..+.-...+.++++...+ ..+++....
T Consensus       333 ~PpD~v---TFSKK~q~g----Gffh~--~~frp-----n~pYrif-NTW-mGdP~k~lll~~vv~~I~~~~Ll~n~~~v  396 (484)
T KOG1405|consen  333 SPPDVV---TFSKKFQTG----GFFHD--EEFRP-----NEPYRIF-NTW-MGDPSKNLLLEEVVQEIKREDLLNNVAHV  396 (484)
T ss_pred             CCccce---ehhhhhhcC----ccccC--cccCC-----CchHHHh-hhh-cCChHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            332233   899997444    44432  11000     0111111 122 2222222222333332222 223332222


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C
Q 014631          321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I  398 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~  398 (421)
                      -..+...+.+.-++.|+.---....|+ |.-+.++..      ...+.+...++-+||.+..+   + ...||+-++  .
T Consensus       397 G~~l~~gL~~Lq~~~p~~~~~~RGrGT-F~a~d~ps~------~~Rdk~i~~~~~nGv~~GGC---g-~~siRfRPsLvf  465 (484)
T KOG1405|consen  397 GKALLKGLLELQAKYPGKINNLRGRGT-FIAWDCPSG------SIRDKLILIARLNGVNLGGC---G-DKSIRFRPSLVF  465 (484)
T ss_pred             HHHHHHHHHHHHHhCchhhhcccccce-EEEEeCCCh------HHHHHHHHHHHHcCceeccc---c-cceeeeccceee
Confidence            222333333333345664313344544 554577653      24455555668889877432   2 345666655  6


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 014631          399 EPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       399 ~~e~l~~~~~~l~~~~~~  416 (421)
                      .+.-.+-+++++.+++..
T Consensus       466 ~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  466 RKHHADIFLDIFDKILAG  483 (484)
T ss_pred             hhhhHHHHHHHHHHHhcc
Confidence            777888888888887754

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.79  E-value=1.2e-08  Score=92.43  Aligned_cols=251  Identities=16%  Similarity=0.162  Sum_probs=50.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCC-----CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCe
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVG-----ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN  135 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g-----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~  135 (421)
                      +.++++.+++.+.........|.-..|     +..+++.++.+.        ..+..+++++...|+.+++.++. +|.+
T Consensus        17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt--------gAeaA~VvNnnaAAv~L~l~~la-~~~E   87 (367)
T PF03841_consen   17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT--------GAEAALVVNNNAAAVLLALNTLA-KGKE   87 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccccccccccc-cccc
Confidence            456778888877765533334432222     233444444433        35678888888899999988885 5678


Q ss_pred             EEEcCCCCcc------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC--cccccCHHHHHHH
Q 014631          136 ILLPKPGFPL------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP--CGNVFTYQQLQKI  207 (421)
Q Consensus       136 Vl~~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np--tG~~~~~~~l~~i  207 (421)
                      |+++...-..      +..+.+..|++++.+...  +  .-.++++++++.++|.+++..+++|-  .|..-. -.++++
T Consensus        88 vIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt--N--~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el  162 (367)
T PF03841_consen   88 VIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT--N--RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEEL  162 (367)
T ss_dssp             ------------------------------------------------------------------------------HH
T ss_pred             cccccccccccccccccccccccccccccccccc--c--cccccccccccccccccccccccccccccccccc-ccHHHH
Confidence            8776433221      345667788888777642  2  24678899999999999999998774  232211 358999


Q ss_pred             HHHHHhcCcEEEEcccccccc----cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          208 AEKARKLGIMVISDEVYDHLT----FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       208 ~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      ++++++||+++|+|-..+.+.    ++-...+.+..+-..+-.++++|-.|.+|  |...|.+++.        ++++++
T Consensus       163 ~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gk--------k~lI~~  232 (367)
T PF03841_consen  163 AELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGK--------KELIEK  232 (367)
T ss_dssp             HHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEE--------HHHHHH
T ss_pred             HHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeC--------HHHHHH
Confidence            999999999999997763322    11111122333322222377778889865  4558999995        578888


Q ss_pred             Hhhhcc-cccCCchHHHHHHHHHhhccch-----------hHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          284 IKGYLN-ISSGPATFVQGAVPQIFKNTKE-----------DFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       284 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++..- ...-.......++.++|+....           ..+....+.++++.+.+.+.|...
T Consensus       233 lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~  296 (367)
T PF03841_consen  233 LKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA  296 (367)
T ss_dssp             HHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred             HhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence            876542 2234566667776666654221           123333455566666666666643

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.77  E-value=3.8e-05  Score=70.43  Aligned_cols=337  Identities=18%  Similarity=0.201  Sum_probs=184.5

Q ss_pred             HHHHHHHhccccCCCCee-eccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCC-----C----CHHHHHHHHHH
Q 014631           30 ALTIIKQNLKENDPRPII-PLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSV-----G----ILPARRAIADY   98 (421)
Q Consensus        30 ~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~-----g----~~~l~~~ia~~   98 (421)
                      ...++++...++.  .+. .+|.|.-.    ...|+.+...+.   .++. +..|.|.+     |    +-++..-++++
T Consensus        62 ~l~~l~~ia~kN~--~~~sfiG~GyY~----~~~P~vI~rnil---e~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL  132 (450)
T COG0403          62 ALAELKEIASKNK--VFTSFIGAGYYD----TYTPPVILRNIL---ENPEWYTAYTPYQPEISQGRLEALFEFQTLVADL  132 (450)
T ss_pred             HHHHHHHHHhcCc--hhhhhccCcccC----CcCcHHHHHHhh---cCccccccCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            4444444444432  222 34555422    245666653333   3432 34565543     2    22334445555


Q ss_pred             HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc---CCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCC
Q 014631           99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLA---RPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVD  171 (421)
Q Consensus        99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d  171 (421)
                      .      +.+-.+.-+-.++|.+-+++..+..   .+..+++++...|+.+....+    -.|.+++.++.+       |
T Consensus       133 T------Gm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d  199 (450)
T COG0403         133 T------GLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------D  199 (450)
T ss_pred             h------CCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------h
Confidence            4      3455666677777777666665542   335899999999998877665    345555555432       6


Q ss_pred             HHHHHhhhccCceEEEEeCCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEc-ccccccccCCCCcccccccCCCCCEEEE
Q 014631          172 LDGLEALADENTVAMVIVNPGNPCG-NVFTYQQLQKIAEKARKLGIMVISD-EVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       172 ~e~l~~~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      .+++++....++.++++-.|+. .| ..   +++++|.+.++++|.++++= |.-+....     .+-..++.+   |++
T Consensus       200 ~~~l~~~~~~~~~gv~vQyP~~-~G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~LL-----~pPGe~GAD---Ivv  267 (450)
T COG0403         200 LDDLESADDGDVFGVLVQYPNT-FGIVE---EDLRALIEAAHSAGALVIVAADPLALGLL-----KPPGEFGAD---IVV  267 (450)
T ss_pred             hhhhhhccccCeEEEEEecCCC-CCccc---hhHHHHHHHHhhcCCEEEEEechhHhhcc-----CCccccCCc---eEE
Confidence            7777777333677888888884 66 44   77999999999999877642 22222111     112233333   777


Q ss_pred             cccccccCC----CCceEEEEEeeCCC-------------cchhHHHHH-------HHHhhhcccc-cCCchH-HHHHHH
Q 014631          250 GSMSKRWIV----PGWRLGWLVTSDPS-------------GILQELRIV-------DSIKGYLNIS-SGPATF-VQGAVP  303 (421)
Q Consensus       250 ~s~sK~~~~----~G~r~G~~~~~~~~-------------~~~~~~~~~-------~~~~~~~~~~-~~~~~~-~~~~~~  303 (421)
                      ++..-. |.    +|.-+||..+.+.-             ....++.+.       +.+++.+..+ -|.+.. ...++.
T Consensus       268 G~~Qrf-GvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As  346 (450)
T COG0403         268 GSAQRF-GVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAAS  346 (450)
T ss_pred             ecCccc-CCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHH
Confidence            766544 43    35668888775310             000000010       1112222111 122211 111222


Q ss_pred             HHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          304 QIFKNTKEDFFSKIVDILRDTADICYDRIKEIP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       304 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      .++......++.++.++..++..++.+.|++.. |+...  .. .+|-.+.+....    .....++. .....|+-+..
T Consensus       347 ~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~--~~-~fFdt~~v~~~~----~~~~~l~~-~~~~~G~~L~~  418 (450)
T COG0403         347 MYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV--FD-HFFDTFTVRVPE----EVAEALLA-AAIAGGINLRR  418 (450)
T ss_pred             HHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec--cc-cceeeEEEecch----hHHHHHHH-HHHhcCCceee
Confidence            223334578999999999999999999999652 46622  22 556555444210    01222222 23445766654


Q ss_pred             CCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          383 GMAVGMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       383 g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      -.    .+.+-+++.  +++++++.+++.+...
T Consensus       419 ~~----~~~~~ia~tEt~t~~~i~~l~~~~~~~  447 (450)
T COG0403         419 VD----ADTVLIALTETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             ec----CCceEEEeecccCHHHHHHHHHHHhhh
Confidence            22    235666665  6789999999988765

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=98.74  E-value=1.4e-05  Score=69.84  Aligned_cols=342  Identities=12%  Similarity=0.040  Sum_probs=199.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCC-------CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCY-------SPSVGILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y-------~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      +.++|.|..+.-.     ..|+...+.+.+-++... ..-|       +...+-..+-..++...      ++..++|.+
T Consensus        65 d~~~iYlcGNSLG-----LmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Evav  133 (465)
T KOG3846|consen   65 DKPVIYLCGNSLG-----LMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAV  133 (465)
T ss_pred             CCCeEEEeccccc-----cCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhh
Confidence            4566666655422     345666666666655411 1112       22233456666677766      467889999


Q ss_pred             cCCHHHHHHHHHHHhcCCC---CeEEEcCCCCc----chHHHHhhcCceeEe--eeccC-CCCccCCHHHHHhhhccC--
Q 014631          115 TAGCKQAIQVILTVLARPG---ANILLPKPGFP----LYEANARHTRLEIRH--FDLLP-EKGWEVDLDGLEALADEN--  182 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~g---d~Vl~~~p~y~----~~~~~~~~~g~~~~~--~~~~~-~~~~~~d~e~l~~~~~~~--  182 (421)
                      .++-|..++.++-++.+|-   -+|+...-+++    .+...++..|..+..  +-+.| +....+..|++.+.+.++  
T Consensus       134 mNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngD  213 (465)
T KOG3846|consen  134 MNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGD  213 (465)
T ss_pred             HhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCC
Confidence            9999999999988887765   47888876554    445666777765322  22222 333446778887776542  


Q ss_pred             -ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631          183 -TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW  261 (421)
Q Consensus       183 -~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  261 (421)
                       ..+++++..+.-||+.++   +.+|...-+..|.++=.|=+|+.    |.-+..++.++.+   +.+-..-|-+..+.-
T Consensus       214 eiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgVD---FACWCSYKYlnaGaG  283 (465)
T KOG3846|consen  214 EIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGVD---FACWCSYKYLNAGAG  283 (465)
T ss_pred             eEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh----cCCceEEeecCCc---eEEEeeecccccCCC
Confidence             344566777999999965   66676655677999999999987    4333344455543   445455576443322


Q ss_pred             eEEEEEeeCCCcchhHHHHHHHHhhhc------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631          262 RLGWLVTSDPSGILQELRIVDSIKGYL------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD  323 (421)
Q Consensus       262 r~G~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  323 (421)
                      .+|-+.+.+...-.+.+.+...+..-.                  ..-++|+.....++...|+...+..+++.+++---
T Consensus       284 gIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~l  363 (465)
T KOG3846|consen  284 GIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLL  363 (465)
T ss_pred             ccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhh
Confidence            356666654322222223333221100                  01135565666666666665444556666665554


Q ss_pred             HHHHHHHHhhcCCC-----------ccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631          324 TADICYDRIKEIPC-----------ITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM  388 (421)
Q Consensus       324 ~~~~~~~~l~~~~g-----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  388 (421)
                      +..++...++..-|           +.++ .|    +.|..+.+.|..+       ...++.+| .++|+.+---    .
T Consensus       364 LTgYleyL~k~~~g~~~~~rt~Kl~~~Ii-TP~~~~erGcQLsl~Fssp-------~~~vfqeL-~krGv~~DkR----~  430 (465)
T KOG3846|consen  364 LTGYLEYLLKASKGYKHPLRTEKLFFTII-TPTSTDERGCQLSLYFSSP-------TPKVFQEL-HKRGVIGDKR----R  430 (465)
T ss_pred             HHhHHHHHHHHhcccCchhhhcceeEEEe-CCcccccccceEEEEeCCC-------chHHHHHH-HHcCeecccc----C
Confidence            44444444433212           2211 22    2344455555431       23455554 7789977432    2


Q ss_pred             CCeEEEEec---CCHHHHHHHHHHHHHHHHHhh
Q 014631          389 KNWLRITFA---IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       389 ~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++.||+.+.   ++-.|+..+++.|.+++....
T Consensus       431 PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e  463 (465)
T KOG3846|consen  431 PNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE  463 (465)
T ss_pred             CCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence            688999986   788999999999999987754

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.64  E-value=2.5e-06  Score=74.13  Aligned_cols=175  Identities=15%  Similarity=0.263  Sum_probs=114.0

Q ss_pred             CCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC-CcchHH---------
Q 014631           80 DCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPG-FPLYEA---------  148 (421)
Q Consensus        80 ~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~-y~~~~~---------  148 (421)
                      .+|+ ..-|-.-|++..|+-++.    ....-+.-+. ++|+|+..++..+++|||+.+..... |.....         
T Consensus        58 tGYGydD~GRdtLe~vyA~vf~a----E~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~  132 (416)
T COG4100          58 TGYGYDDLGRDTLERVYAQVFGA----EAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQ  132 (416)
T ss_pred             CCCCccccchhHHHHHHHHHhcc----ccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCc
Confidence            3555 344556677777776632    2112233343 56889999999999999998775322 333222         


Q ss_pred             -HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC-CCCcccccCHHHHHHHHHHHHh--cCcEEEEcccc
Q 014631          149 -NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVY  224 (421)
Q Consensus       149 -~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~  224 (421)
                       .++..|.+...+++.++  ..+|.+.+...+++++|+|.+--. ....--.++..++++++++.++  .|+++++|.+|
T Consensus       133 gSL~dfgi~Y~~v~Lt~~--gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY  210 (416)
T COG4100         133 GSLKDFGIKYKAVPLTAD--GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY  210 (416)
T ss_pred             ccHHHhCcceeecccccC--CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence             23445666777777654  359999999999999998866432 2222234666999999999985  47899999999


Q ss_pred             cccccCCCCcccccccCCCCCEEEEcccccccCCCCc--eEEEEEee
Q 014631          225 DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW--RLGWLVTS  269 (421)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~~~~~  269 (421)
                      +.|+-.-++  .  ..+.+   ++.+|+-|. ...|+  -.||+.+.
T Consensus       211 GEFvE~~EP--t--~vGaD---liAGSLIKN-pGGgiaktGGYiaGk  249 (416)
T COG4100         211 GEFVEEKEP--T--HVGAD---LIAGSLIKN-PGGGIAKTGGYIAGK  249 (416)
T ss_pred             hhhhhccCc--c--ccchh---hhccceeeC-CCCceeeccceeech
Confidence            998733221  1  22222   678899998 33443  24888874

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.55  E-value=0.00014  Score=74.76  Aligned_cols=305  Identities=13%  Similarity=0.156  Sum_probs=168.9

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCC-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSV-----G----ILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~-----g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ..+|.|.-.    ...|..+.+.+.+   ++. +..|.|.+     |    +-++..-++++.      +.+-.+.-+-.
T Consensus        82 ~fiG~G~y~----~~~P~vi~~~i~~---~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt------Gm~vaNASl~D  148 (954)
T PRK12566         82 SLIGMGYHG----TVTPTVILRNVLE---NPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT------GLDLANASLLD  148 (954)
T ss_pred             ccccccccC----CcCcHHHHHHHHh---CchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh------Cchhhhhhhcc
Confidence            345555432    2355555444433   332 34555543     2    223444455554      24444555555


Q ss_pred             CHHHHHHHHHHHh---cCCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe
Q 014631          117 GCKQAIQVILTVL---ARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV  189 (421)
Q Consensus       117 g~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~  189 (421)
                      ++|.+-+.+..+.   ..+..+|++++..|+.+....+    ..|.+++.             +++++.+++++.++++.
T Consensus       149 ~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~~~~v~vq  215 (954)
T PRK12566        149 EATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHAVFGALLQ  215 (954)
T ss_pred             chhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCCEEEEEEE
Confidence            6665555444333   1224689999999987766554    44555442             23444455567788888


Q ss_pred             CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC----CCCceEEE
Q 014631          190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI----VPGWRLGW  265 (421)
Q Consensus       190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~  265 (421)
                      +|+. .|.+   +++++|.+++++.|.++|+ .+.- +..+.  ..+-..++.+   |++++ ++.||    .+|.-.|+
T Consensus       216 ~P~~-~G~i---~d~~~i~~~~h~~gal~~~-~~d~-laL~l--l~~Pge~GAD---I~vG~-~Q~fGvp~~~GGP~ag~  283 (954)
T PRK12566        216 YPDT-HGEI---RDLRPLIDQLHGQQALACV-AADL-LSLLV--LTPPGELGAD---VVLGS-TQRFGVPMGYGGPHAAY  283 (954)
T ss_pred             CCCC-ceEE---ccHHHHHHHHHHcCCEEEE-EeCH-HHHhC--CCChhhcCCc---EEeeC-CCcCCCCCCCCCCCeee
Confidence            9985 8888   7899999999999988662 2211 01110  1111233333   55653 23333    33455788


Q ss_pred             EEeeCCCcchhHHHHHHHH----------------------------hhhcccc-cCCchHHHH-HHHHHhhccchhHHH
Q 014631          266 LVTSDPSGILQELRIVDSI----------------------------KGYLNIS-SGPATFVQG-AVPQIFKNTKEDFFS  315 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~-~~~~~~~~~-~~~~~l~~~~~~~~~  315 (421)
                      +.+++        ++..++                            ++.+..+ .|.+....+ ++..++.....+++.
T Consensus       284 ~a~~~--------~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~  355 (954)
T PRK12566        284 FACRD--------DYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLK  355 (954)
T ss_pred             eeehH--------HHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHH
Confidence            87753        222222                            1111111 112211111 111222223467889


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631          316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT  395 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~  395 (421)
                      ++.++...+..++.+.|.+ +|++..   ...+|-.+.+...     ....++.. .+.+.|+-++--.    .+.+.||
T Consensus       356 ~ia~~~~~~a~~l~~~l~~-~g~~~~---~~~fF~~~~v~~~-----~~~~~~~~-~a~~~~~n~r~~~----~~~~~~s  421 (954)
T PRK12566        356 RIAQRVHRLTAILAAGLEA-KGIKRL---NRHFFDTLTLEVG-----GAQAAIIE-SAEAARINLRILG----RGRLGVS  421 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHh-cCCccc---cCCccceEEEEcc-----CCHHHHHH-HHHHCCCeeEEeC----CCeEEEE
Confidence            9999999999999999998 488833   2256655555431     02344444 4566788776432    3568888


Q ss_pred             ec--CCHHHHHHHHHHHH
Q 014631          396 FA--IEPSALEEGLGRIK  411 (421)
Q Consensus       396 ~~--~~~e~l~~~~~~l~  411 (421)
                      +.  ++.+|++.++..+.
T Consensus       422 ~de~~~~~~~~~~~~~f~  439 (954)
T PRK12566        422 LDETCDEATVARLFDIFL  439 (954)
T ss_pred             eCCCCCHHHHHHHHHHhc
Confidence            86  67899999998884

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=98.11  E-value=0.00096  Score=64.40  Aligned_cols=303  Identities=15%  Similarity=0.133  Sum_probs=172.9

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH-HHH---HHHHHHHh-cCCC---C-eEEEcCCCCcchHHHHhhcCce
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGC-KQA---IQVILTVL-ARPG---A-NILLPKPGFPLYEANARHTRLE  156 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~-~~a---l~~~~~~l-~~~g---d-~Vl~~~p~y~~~~~~~~~~g~~  156 (421)
                      +|+.++-..+.++|-.-    ..-+.+.+-+++ .++   =..++++. ..+|   . .-+++...|...-..+...|.+
T Consensus       578 qGY~~lf~~Le~~Lc~i----TG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmk  653 (1001)
T KOG2040|consen  578 QGYQQLFTELEKDLCEI----TGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMK  653 (1001)
T ss_pred             hhHHHHHHHHHHHhhee----ecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCE
Confidence            46777777777777542    234667775442 222   22334443 2334   2 4567788888778888999999


Q ss_pred             eEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC
Q 014631          157 IRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP  233 (421)
Q Consensus       157 ~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  233 (421)
                      ++++..+..  ..+|..+|.+...+   +-.++.++-|+. .|+.  .+.+++++++.++||--+..|.+-..-..+=. 
T Consensus       654 vvpV~~~~~--G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMNAqVGlc-  727 (1001)
T KOG2040|consen  654 VVPVGCDAN--GNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMNAQVGLC-  727 (1001)
T ss_pred             EEEeeccCC--CCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCccceeccc-
Confidence            998887643  45999999876644   445677888864 4554  25699999999999999999987644221111 


Q ss_pred             cccccccCCCCCEEEEcccccccCCC----CceEEEEEeeCCCcchhHHHHHHHHhh-----------hc---cc----c
Q 014631          234 YVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGILQELRIVDSIKG-----------YL---NI----S  291 (421)
Q Consensus       234 ~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~----~  291 (421)
                        .-..++.+   +.=-.++|+|+.|    |..+|=+.+..        .++..+-.           ..   ..    +
T Consensus       728 --~pGd~GaD---V~HLNLHKTFcIPHGGGGPg~gPIgVK~--------HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~  794 (1001)
T KOG2040|consen  728 --RPGDIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPW  794 (1001)
T ss_pred             --CCcccccc---ceeecccceeeecCCCCCCCCCccchhh--------hccccCCCCCccCCCCCCCCCCccceeccCC
Confidence              11122222   3333688888764    33345454421        11111110           00   00    0


Q ss_pred             cCC-chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE---EEEecCcccccCCCChHH
Q 014631          292 SGP-ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF---VMVKLNLSLLEGISDDME  367 (421)
Q Consensus       292 ~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  367 (421)
                      ++. -.+...+....|..   .++.+.-+...-+.+++..+|+.+  ..++...+.|..   +.+++.........+..+
T Consensus       795 Gsa~ILpISwaYikmMG~---~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavD  869 (1001)
T KOG2040|consen  795 GSALILPISWAYIKMMGS---GGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVD  869 (1001)
T ss_pred             CcceeehhHHHHHHHhcc---cccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccCCcHHH
Confidence            000 11233444444433   445554555567788999999875  222223333321   223333222112225677


Q ss_pred             HHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          368 FALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       368 ~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++.+| ..+|..- |...+-..+.+-|-+.  -+.++++++++++-.+-++++
T Consensus       870 vAKRL-~DYgFHa-PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~  920 (1001)
T KOG2040|consen  870 VAKRL-MDYGFHA-PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIA  920 (1001)
T ss_pred             HHHHH-HhccCCC-CccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence            77776 6788754 4444555677777776  567899999998776655543

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=97.59  E-value=0.013  Score=51.13  Aligned_cols=329  Identities=14%  Similarity=0.151  Sum_probs=172.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-------CCC---CCHHHHHHHHHHHhhhCCCCCCCCcE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-------PSV---GILPARRAIADYLNSELPCKLSPDDV  112 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-------~~~---g~~~l~~~ia~~l~~~~~~~~~~~~i  112 (421)
                      ..+++||+.|- .     ..|..|...+++.+-+....+-+       +..   -+...+..+.+++    +++-+-.-+
T Consensus         5 ~~~vvnFaaGP-A-----klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLl----niPdn~~vl   74 (370)
T KOG2790|consen    5 PERVVNFAAGP-A-----KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELL----NIPDNYKVL   74 (370)
T ss_pred             ccceeecCCCc-c-----cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHH----cCCCceeEE
Confidence            56889999884 3     24455555555444331111110       111   1334455555555    434333345


Q ss_pred             EEcCCHHHHHHHHHHHhc--CCC---CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCc--cCCHHHHHhhhccCceE
Q 014631          113 YLTAGCKQAIQVILTVLA--RPG---ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGW--EVDLDGLEALADENTVA  185 (421)
Q Consensus       113 ~~~~g~~~al~~~~~~l~--~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~--~~d~e~l~~~~~~~~~~  185 (421)
                      ++-.|||.-..++...|.  +.|   |-|++-..+--++.. ++.+|..-..++-..+..+  -+|.+.++.  +++.+-
T Consensus        75 f~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~E-Akk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~y  151 (370)
T KOG2790|consen   75 FLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEE-AKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASY  151 (370)
T ss_pred             EEeCCCcccccccchhhhccccCCccceEEeccccHHHHHH-HHhhCCceEEeccccccccCcCCChhhccc--CCCccE
Confidence            666777877777766664  444   555554433333333 3344533222221111111  134444332  334455


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      +.+|.--..-|+-++.-.      +-..+|.+++.|-..-.+.    .+.++..+     -+++....|..|.+|+  -.
T Consensus       152 vyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvsk~-----gvi~aGAQKN~G~aG~--Tv  214 (370)
T KOG2790|consen  152 VYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVSKF-----GVIFAGAQKNVGPAGV--TV  214 (370)
T ss_pred             EEEecCceeeceecCCCC------CCCCCCceEEEecccchhc----CCccchhc-----ceEEeccccccCcccc--EE
Confidence            666544344566543222      1135688888886654432    12233222     2666678999888884  55


Q ss_pred             EEeeCCCcchhHHHHHHHHhh-------------hcccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHH
Q 014631          266 LVTSDPSGILQELRIVDSIKG-------------YLNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      +++++        +++.....             ......+++.+..++....++... ..++....+...+....+++.
T Consensus       215 vivr~--------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~  286 (370)
T KOG2790|consen  215 VIVRK--------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDA  286 (370)
T ss_pred             EEEeh--------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            55542        23322211             112234566666555544444322 356677777788889999999


Q ss_pred             hhcCCCcc-ccCCCCc--eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHH
Q 014631          332 IKEIPCIT-CPRKPEG--SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEG  406 (421)
Q Consensus       332 l~~~~g~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~  406 (421)
                      +.+..|+. |+..|..  -+-+.+++....     -..+|+.+.++ ++..-.-|+.  .-+.+|-|+=  .+-++.+++
T Consensus       287 iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~-----Le~eFLkeA~~-~~mv~LKGhR--SVGGiRASlYNAisv~~~q~L  358 (370)
T KOG2790|consen  287 IDNSNGFYRCPVEPSVRSRMNVPFRIEKDE-----LEAEFLKEAAK-EHMVQLKGHR--SVGGIRASLYNAISVEEVQKL  358 (370)
T ss_pred             HHhcCCeEEcccchhhhhhcccceeecchH-----HHHHHHHHHHH-hhhhcccccc--ccccchhhhhccccHHHHHHH
Confidence            99876654 3434433  244455554322     13456666544 4554444432  2367999984  688999999


Q ss_pred             HHHHHHHHHHh
Q 014631          407 LGRIKAFCQRH  417 (421)
Q Consensus       407 ~~~l~~~~~~~  417 (421)
                      ++-++++.+++
T Consensus       359 ~~~m~~F~k~h  369 (370)
T KOG2790|consen  359 AAFMKEFQKKH  369 (370)
T ss_pred             HHHHHHHHHhc
Confidence            99888887654

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=97.57  E-value=0.00072  Score=58.09  Aligned_cols=155  Identities=15%  Similarity=0.167  Sum_probs=83.9

Q ss_pred             CCCCCCCCcEEEcCCHHHHHHHHHHHhc--CCCCe-EEEcCCCCcchHHHHhhcCceeEeeeccCCCC-ccCCHHHHHhh
Q 014631          103 LPCKLSPDDVYLTAGCKQAIQVILTVLA--RPGAN-ILLPKPGFPLYEANARHTRLEIRHFDLLPEKG-WEVDLDGLEAL  178 (421)
Q Consensus       103 ~~~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd~-Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~  178 (421)
                      .|...-...+++--.+-.++.+.+..+.  +|.-+ |+...-.-.+.....-..|.+++.+.-..+.+ .--|++.+++.
T Consensus        70 ~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~  149 (432)
T KOG3843|consen   70 AGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAI  149 (432)
T ss_pred             hhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHH
Confidence            3434444444443334445555555553  34433 44343333344444556788877765433332 33478888877


Q ss_pred             hcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEccccccc
Q 014631          179 ADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRW  256 (421)
Q Consensus       179 ~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~  256 (421)
                      +.+ +...|+........=..-+++.+++|..+|..|++.-|+..+|+.-.  .+....+.....-++ ..++.|+-|.|
T Consensus       150 iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqs--ee~i~~iaa~~~~grida~vqsldknf  227 (432)
T KOG3843|consen  150 IEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQS--EECIHKIAAAAECGRIDAFVQSLDKNF  227 (432)
T ss_pred             HHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccch--HHHHHHHHHHhhhccHHHHHHHhhhcc
Confidence            754 23334332222111122356889999999999999999999998632  111111111111111 14567999999


Q ss_pred             CCC
Q 014631          257 IVP  259 (421)
Q Consensus       257 ~~~  259 (421)
                      ..|
T Consensus       228 ~vp  230 (432)
T KOG3843|consen  228 MVP  230 (432)
T ss_pred             eee
Confidence            776

>PLN02672 methionine S-methyltransferase

Probab=96.64  E-value=0.088  Score=55.95  Aligned_cols=230  Identities=13%  Similarity=0.133  Sum_probs=132.9

Q ss_pred             hhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhh
Q 014631           22 TATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNS  101 (421)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~  101 (421)
                      ..|++++.+++.++.-  .+.-.+-+||+.-+-+...  ...| ....+...+......-|.++.|-..+|..||.|+..
T Consensus       367 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (1082)
T PLN02672        367 RQPNQVKTIFKFLKNG--FHEVSGSLDLSFEDESVAD--EKIP-FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRI  441 (1082)
T ss_pred             cCchHHHHHHHHHHcc--chhhhhhccccccccccch--hhcc-HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHH
Confidence            3467777777665521  1223345677655433210  1111 345666677766667888999999999999999999


Q ss_pred             hCCCCCCCCcEEEcCCHHHHHHHHHHHhc------CCCCeEEEcCCCCcchHHHHhhcC--------ceeEeeeccCCCC
Q 014631          102 ELPCKLSPDDVYLTAGCKQAIQVILTVLA------RPGANILLPKPGFPLYEANARHTR--------LEIRHFDLLPEKG  167 (421)
Q Consensus       102 ~~~~~~~~~~i~~~~g~~~al~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~g--------~~~~~~~~~~~~~  167 (421)
                      ..+++.++++|++.++-..|+..+++.+.      ..+.+-.++    .-|.......|        ..+..+..+.   
T Consensus       442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  514 (1082)
T PLN02672        442 YHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSLAIENATSDSKSDDVITVIEAPR---  514 (1082)
T ss_pred             hcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHhhhhcccccCccCCeEEEEeCCC---
Confidence            99999999999999999999998887763      122111111    11222222222        2222222111   


Q ss_pred             ccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCC---
Q 014631          168 WEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGS---  242 (421)
Q Consensus       168 ~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~---  242 (421)
                         ..+.+.+++++ ++++++..-...   -..+..-.+.|.+.+++.|..++.|..-.. +........-+..+..   
T Consensus       515 ---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (1082)
T PLN02672        515 ---QSDLVIELIKKLKPQVVVTGMADF---EMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPL  588 (1082)
T ss_pred             ---cchHHHHHHHhCCCeEEEEeccch---hhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCC
Confidence               11234444433 344443222222   122336689999999999999999976332 2211111111111111   


Q ss_pred             CCCEEEEcccccccCCCCceEEEEEee
Q 014631          243 TVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      ..+..++..+-|.-..+.+.+.+++.-
T Consensus       589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  615 (1082)
T PLN02672        589 PSHAAIICGLVKNQVYSDLEVAFVISE  615 (1082)
T ss_pred             CcchhHhhhhhhccccccceEEEEecC
Confidence            123455667888877899999999864

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=90.45  E-value=21  Score=35.84  Aligned_cols=244  Identities=11%  Similarity=0.132  Sum_probs=123.8

Q ss_pred             CCCCeEEEcCCCCcchHHHHhhc--CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHH
Q 014631          131 RPGANILLPKPGFPLYEANARHT--RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIA  208 (421)
Q Consensus       131 ~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~  208 (421)
                      .++.++++...+|+-.....+..  +.++.. .+       .|+++.... .++...+++--|.. -|.+.   +..+++
T Consensus       203 ~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v-~~-------~~~~~~~~s-~~~v~gvlvQYP~t-~G~i~---d~~el~  269 (1001)
T KOG2040|consen  203 NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKV-VV-------SDIKEADYS-SKDVSGVLVQYPDT-EGSVL---DFDELV  269 (1001)
T ss_pred             cccceEEecCCCCcchhhhhhccccccceeE-Ee-------cCHHHhhcc-ccceeEEEEEcCCC-CCccc---CHHHHH
Confidence            45667999999998776666521  222221 11       233333222 23455666666654 67774   567777


Q ss_pred             HHHHhcCcEEEEcc-cccccccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEE--------------Eee
Q 014631          209 EKARKLGIMVISDE-VYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWL--------------VTS  269 (421)
Q Consensus       209 ~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~--------------~~~  269 (421)
                      +.++..|.+++.-. --+.-.     ..+-..++.   .|.++|...+ |.|    |.-.|+.              ++-
T Consensus       270 ~~a~~~~s~vv~atDLLaLti-----LrpPgefGa---DIavGSsQRF-GVPlGYGGPHAaFfAv~~~l~R~mPGRiiGv  340 (1001)
T KOG2040|consen  270 ELAHANGSLVVMATDLLALTI-----LRPPGEFGA---DIAVGSSQRF-GVPLGYGGPHAAFFAVSESLVRMMPGRIIGV  340 (1001)
T ss_pred             HHhhccCceEEEeehhhHHHc-----cCChhhcCc---eeeecccccc-CccccCCCchHHHHHHHHHHHhhCCCceEee
Confidence            88888888766421 111100     111122332   3667765444 443    1111111              111


Q ss_pred             CCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhc-----cchhHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 014631          270 DPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKN-----TKEDFFSKIVDILRDTADICYDRIKEIPCITC  340 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~  340 (421)
                      ..+.. .+..+.-.++..    +.--.+.|.....|+.+-+..     ....+++++.++.....-.+...|++. |-++
T Consensus       341 tkD~~-gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel  418 (1001)
T KOG2040|consen  341 TKDAL-GKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHEL  418 (1001)
T ss_pred             eeccc-ccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhh
Confidence            00000 011122222111    110112333333333222221     235788999999999999999999875 5553


Q ss_pred             cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631          341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK  411 (421)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~  411 (421)
                      .   ...+|-.+++....     ...++..+.+ +++|-++--    ..+.+-+++-  ++.+|++.++..+.
T Consensus       419 ~---~k~fFDTLkI~~~~-----s~~~~l~rA~-~~~iNlr~~----ed~tigvslDETv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  419 Q---HKPFFDTLKIRCGC-----SAEEVLDRAA-KRQINLRLV----EDGTIGVSLDETVTEKDVDDLLWVFN  478 (1001)
T ss_pred             c---cccccceEEEEecC-----cHHHHHHHHH-hhcCceEEe----ecCceEEeecccccHHHHHHHHHHHc
Confidence            3   22367666665431     3556666554 445655421    2466778886  67889999888765

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=88.04  E-value=5.9  Score=33.92  Aligned_cols=99  Identities=21%  Similarity=0.341  Sum_probs=64.0

Q ss_pred             cEEEcCCHHHHHHHHHHHhcCCCCeEE-----EcC---------CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631          111 DVYLTAGCKQAIQVILTVLARPGANIL-----LPK---------PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus       111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl-----~~~---------p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      -+.+-+||-.++.++..++ +.|..|.     .+.         |...-....++..|.++......-+  ..-..+++.
T Consensus         3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~   79 (223)
T COG2102           3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK   79 (223)
T ss_pred             EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence            3677889888888877666 3443221     111         1111224556677888777765431  223567776


Q ss_pred             hhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631          177 ALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI  219 (421)
Q Consensus       177 ~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  219 (421)
                      +++.. +..+|+       +|.+++..+...+-.+|++.|+.++
T Consensus        80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~  116 (223)
T COG2102          80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY  116 (223)
T ss_pred             HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence            66643 334554       8999999999999999999998765

>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]

Probab=80.75  E-value=43  Score=30.21  Aligned_cols=105  Identities=16%  Similarity=0.200  Sum_probs=63.3

Q ss_pred             CCCcEEEcCCHHHHHHHHHHHhcCCCC--eEEEc--CCCCcchHHHHh--hcCceeEeeeccCCCCccCCHHHHHhhhcc
Q 014631          108 SPDDVYLTAGCKQAIQVILTVLARPGA--NILLP--KPGFPLYEANAR--HTRLEIRHFDLLPEKGWEVDLDGLEALADE  181 (421)
Q Consensus       108 ~~~~i~~~~g~~~al~~~~~~l~~~gd--~Vl~~--~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~  181 (421)
                      -..+|++|.|.+..+..++....++|+  .|++.  .|.+.++..+..  ..|++...++         |. ++-+....
T Consensus       161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------da-aVfA~Msr  230 (353)
T KOG1465|consen  161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------DA-AVFAMMSR  230 (353)
T ss_pred             ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------cH-HHHHHhhh
Confidence            456899999988888887777666664  34454  355554333222  3456554443         22 33343333


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcc
Q 014631          182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE  222 (421)
Q Consensus       182 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  222 (421)
                      -.|+|+-+..--+-|-+..+.-...++..|++|-..+|+=.
T Consensus       231 VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA  271 (353)
T KOG1465|consen  231 VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA  271 (353)
T ss_pred             cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence            34555555544444556566677888889999988877643

>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]

Probab=80.10  E-value=28  Score=33.59  Aligned_cols=132  Identities=16%  Similarity=0.166  Sum_probs=74.5

Q ss_pred             CCCCHHHHHHHHHHHhhhCCC-----------CCCCCcEEEcCCHHHHHHHHHHHhcCCC---CeEEEc-CCCCcch--H
Q 014631           85 SVGILPARRAIADYLNSELPC-----------KLSPDDVYLTAGCKQAIQVILTVLARPG---ANILLP-KPGFPLY--E  147 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~-----------~~~~~~i~~~~g~~~al~~~~~~l~~~g---d~Vl~~-~p~y~~~--~  147 (421)
                      ..+-.+|.+.|-+|+......           .+...++++|-|.+..++.++....+.|   ..|+++ .|..-+-  .
T Consensus       324 ~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~l  403 (556)
T KOG1467|consen  324 SEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLL  403 (556)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHH
Confidence            334456666666666554332           2345577777777767666654433333   233343 3444442  2


Q ss_pred             HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE-Ecccccc
Q 014631          148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI-SDEVYDH  226 (421)
Q Consensus       148 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~De~~~~  226 (421)
                      .-+...|++..|+-++.     ++.     ...+-+++++=++.--.-|.+|+..--..++-+++.||+.+| +=|+|-+
T Consensus       404 r~Lv~~GinctYv~I~a-----~sy-----im~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yKF  473 (556)
T KOG1467|consen  404 RRLVDRGINCTYVLINA-----ASY-----IMLEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYKF  473 (556)
T ss_pred             HHHHHcCCCeEEEEehh-----HHH-----HHHhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhhh
Confidence            33345677777765431     111     111224444333443456888888888889999999999766 4566654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	421
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		2e-76
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		4e-75
1bw0_A	416	Crystal Structure Of Tyrosine Aminotransferase From		2e-53
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		7e-37
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		1e-28
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		2e-28
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		3e-24
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		7e-23
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		1e-22
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		7e-21
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		4e-20
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		7e-20
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		2e-19
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		8e-19
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		9e-19
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		1e-18
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		3e-18
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		3e-18
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		3e-18
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		5e-18
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		2e-17
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		8e-17
3tcm_A	500	Crystal Structure Of Alanine Aminotransferase From		6e-16
1wst_A	417	Crystal Structure Of Multiple Substrate Aminotransf		1e-15
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		1e-15
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		2e-15
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		4e-15
3ihj_A	498	Human Alanine Aminotransferase 2 In Complex With Pl		5e-15
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		9e-15
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		1e-14
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		2e-14
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		2e-14
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		3e-14
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		4e-14
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		4e-14
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		8e-14
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		9e-13
3piu_A	410	High-Resolution Structure Of Native Malus Domestica		2e-12
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		2e-12
1b8g_A	429	1-aminocyclopropane-1-carboxylate Synthase Length =		2e-12
1m7y_A	435	Crystal Structure Of Apple Acc Synthase In Complex		2e-12
3b1c_A	392	Crystal Structure Of Betac-S Lyase From Streptococc		4e-12
4ge7_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		1e-11
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		2e-11
4gdy_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-11
2xh1_A	425	Crystal Structure Of Human Kat Ii-Inhibitor Complex		5e-11
3ue8_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		6e-11
2r2n_A	425	The Crystal Structure Of Human Kynurenine Aminotran		7e-11
4dgt_A	391	Crystal Structure Of Plp-Bound Putative Aminotransf		7e-11
2vgz_A	427	Crystal Structure Of Human Kynurenine Aminotransfer		2e-10
2qlr_A	425	Crystal Structure Of Human Kynurenine Aminotransfer		2e-10
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		6e-10
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		4e-09
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		6e-09
3l8a_A	421	Crystal Structure Of Metc From Streptococcus Mutans		6e-09
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		8e-09
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		9e-09
3fdb_A	377	Crystal Structure Of A Putative Plp-Dependent Beta-		1e-08
3t32_B	383	Crystal Structure Of A Putative C-S Lyase From Baci		2e-08
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		3e-08
1c7n_A	399	Crystal Structure Of Cystalysin From Treponema Dent		5e-08
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		7e-08
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		9e-08
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		9e-08
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		1e-07
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		1e-07
3dzz_A	391	Crystal Structure Of A Putative Plp-Dependent Amino		3e-07
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		3e-07
1d2f_A	390	X-Ray Structure Of Maly From Escherichia Coli: A Py		3e-07
3nra_A	407	Crystal Structure Of An Aspartate Aminotransferase		5e-07
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		7e-07
3euc_A	367	Crystal Structure Of Histidinol-Phosphate Aminotran		1e-06
3g7q_A	417	Crystal Structure Of Valine-Pyruvate Aminotransfera		1e-06
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		2e-06
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		2e-06
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		2e-06
3f6t_A	533	Crystal Structure Of Aspartate Aminotransferase (E.		4e-06
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		9e-06
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		1e-05
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		2e-05
2x5f_A	430	Crystal Structure Of The Methicillin-Resistant Stap		2e-05
3if2_A	444	Crystal Structure Of Putative Amino-Acid Aminotrans		2e-04
3g0t_A	437	Crystal Structure Of Putative Aspartate Aminotransf		5e-04

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 142/385 (36%), Positives = 217/385 (56%), Gaps = 13/385 (3%)
Query: 38  LKENDPRPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIAD 97
           +K N  + +I L  GDP+ F    T P           S +++ Y+PS+G L +R  +A 
Sbjct: 25  VKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVAS 84
Query: 98  YLNS-ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
           Y +  E P  L   DV LT+GC QAI++ L VLA PG NIL+P+PGF LY   A    +E
Sbjct: 85  YYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIE 142
Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           ++ ++LLPEK WE+DL  LE+L DE T  +V+ NP NPCG+VF+ + LQKI   A +  +
Sbjct: 143 VKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCV 202
Query: 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL- 275
            +++DE+Y  + F    Y  M    + VP+++ G ++ RW+VPGWRLGW++  D   I  
Sbjct: 203 PILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFG 262
Query: 276 QELRIVDSIKGYLNISS---GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
            E+R      G + +S    GP T VQGA+  I + T ++F+   +  L+  AD+CY  +
Sbjct: 263 NEIR-----DGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGAL 317
Query: 333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392
             IP +  P +P G+M++MV + +       +D+EF  +L  E+SV  LP       N+ 
Sbjct: 318 SAIPGLQ-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFF 376
Query: 393 RITFAIEPSALEEGLGRIKAFCQRH 417
           R+   +    + E   RI+ FC++H
Sbjct: 377 RVVITVPEVMMLEACSRIQEFCEQH 401

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 142/385 (36%), Positives = 216/385 (56%), Gaps = 13/385 (3%)
Query: 38  LKENDPRPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIAD 97
           +K N  + +I L  GDP+ F    T P           S +++ Y+PS+G L +R  IA 
Sbjct: 48  VKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIAS 107
Query: 98  YLNS-ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
           Y +  E P  L   DV LT+GC QAI + L VLA PG NIL+P+PGF LY+  A    +E
Sbjct: 108 YYHCPEAP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIE 165
Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           ++ ++LLPEK WE+DL  LE L DE T  +++ NP NPCG+VF+ + LQKI   A +  +
Sbjct: 166 VKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCV 225
Query: 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL- 275
            +++DE+Y  + F    Y  +    + VP+++ G ++KRW+VPGWRLGW++  D   I  
Sbjct: 226 PILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG 285
Query: 276 QELRIVDSIKGYLNISS---GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
            E+R      G + +S    GP T VQGA+  I   T  +F+   +  L+  AD+CY  +
Sbjct: 286 NEIR-----DGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGAL 340
Query: 333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392
             IP +  P +P G+M++MV + +       +D+EF  +L  E+SV  LP       N++
Sbjct: 341 AAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFI 399
Query: 393 RITFAIEPSALEEGLGRIKAFCQRH 417
           R+   +    + E   RI+ FC++H
Sbjct: 400 RVVITVPEVMMLEACSRIQEFCEQH 424

>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From Trypanosoma Cruzi Length = 416

Iteration: 1
 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 198/387 (51%), Gaps = 15/387 (3%)
Query: 43  PRPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNS- 101
           P+PII L  GDP+      T+            S E + Y P+VG   AR A+A +  + 
Sbjct: 32  PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNS 91
Query: 102 -----ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
                EL   +  D+V L +G    I + +T +   G   L+P+PGFP YE   +   + 
Sbjct: 92  FVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIG 151
Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           +  ++  PE  WE DLD +  L D+ T  +++ NP NPCG+ F+ + ++ I   A +L +
Sbjct: 152 MHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRL 211
Query: 217 MVISDEVYDHLTF-GSTP---YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272
            + SDE+Y  + F G  P   +  +  F +TVP + LG  +   +VPGWRLGWL+  DP 
Sbjct: 212 PLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPH 271
Query: 273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
           G       ++ +K    +  GP T VQ A+ +   NT ++   +IV  + ++A   Y+ I
Sbjct: 272 G--NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHI 329
Query: 333 KEIPCI-TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW 391
            E  CI   P  P G+M++M +++L     I  D+EF  +L +EE+V VLPG       +
Sbjct: 330 GE--CIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGF 387
Query: 392 LRITFAIEPSALEEGLGRIKAFCQRHA 418
            R+T         E + RIKAFCQRHA
Sbjct: 388 TRLTTTRPVEVYREAVERIKAFCQRHA 414

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score =  151 bits (381), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 172/377 (45%), Gaps = 12/377 (3%)
Query: 46  IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +I L  GDP  F      P               + Y  S G+   R+AI +    +   
Sbjct: 40  VIRLNIGDPVKFDF--QPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGV 97
Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
            ++PDDV +TA   +A+Q+I   L  PG  IL+P P +P Y    +    +   +  + E
Sbjct: 98  DITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEE 157
Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
           + W+ D+D +     + T A+ ++NP NP G ++  + L++I   A +  I VISDE+YD
Sbjct: 158 EDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYD 217
Query: 226 HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285
            +T+    ++  G     VPVI +  +SK +   GWRLG++   DP   L E+R  ++I 
Sbjct: 218 LMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVR--EAID 274
Query: 286 GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345
               I   P T  Q A          D+  + +  L++  D  Y R+ EIP I+   KP+
Sbjct: 275 RLARIRLCPNTPAQFAAIAGLTGPM-DYLKEYMKKLKERRDYIYKRLNEIPGIST-TKPQ 332
Query: 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSAL 403
           G+ ++  K+ +   +   +D EF L +     V+ + G   G       R  F      L
Sbjct: 333 GAFYIFPKIEVGPWK---NDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEIL 389
Query: 404 EEGLGRIKAFCQRHAKQ 420
           EE + R + F +   K+
Sbjct: 390 EEAMDRFEKFMKERLKE 406

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 184/382 (48%), Gaps = 41/382 (10%)
Query: 44  RPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSEL 103
           + +I LG G+P        TP                 Y P++G+L  R AIA+ L  + 
Sbjct: 26  KDVISLGIGEPDF-----DTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 80
Query: 104 PCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRH 159
             +  P  ++ +  G  QA  + L+   + G  +L+P P F  Y      A    +E+  
Sbjct: 81  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 140
Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
           ++   E  + +++D L+    + T A++I +P NP G V T + L++IA+   +  ++VI
Sbjct: 141 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 220 SDEVYDHLTFGSTPYVRM----GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275
           SDEVY+H  +    +  +    G+F  T   IT+   SK + + GWRLG++    PS I+
Sbjct: 198 SDEVYEHFIYDDARHYSIASLDGMFERT---ITVNGFSKTFAMTGWRLGFVAA--PSWII 252
Query: 276 QELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD----ICYDR 331
           + +     +K  +  ++ P TF+Q A  +  K+ +     K V+ +R   D    + + R
Sbjct: 253 ERM-----VKFQMYNATCPVTFIQYAAAKALKDERS---WKAVEEMRKEYDRRRKLVWKR 304
Query: 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--K 389
           + E+   T   KP+G+ ++  ++  + L       +F+  + KE  V V+PG A G   +
Sbjct: 305 LNEMGLPTV--KPKGAFYIFPRIRDTGLTS----KKFSELMLKEARVAVVPGSAFGKAGE 358
Query: 390 NWLRITFAIEPSALEEGLGRIK 411
            ++RI++A     LEE + R++
Sbjct: 359 GYVRISYATAYEKLEEAMDRME 380

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 184/382 (48%), Gaps = 41/382 (10%)
Query: 44  RPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSEL 103
           + +I LG G+P        TP                 Y P++G+L  R AIA+ L  + 
Sbjct: 25  KDVISLGIGEPDF-----DTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 79
Query: 104 PCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRH 159
             +  P  ++ +  G  QA  + L+   + G  +L+P P F  Y      A    +E+  
Sbjct: 80  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139
Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
           ++   E  + +++D L+    + T A++I +P NP G V T + L++IA+   +  ++VI
Sbjct: 140 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 220 SDEVYDHLTFGSTPYVRM----GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275
           SDEVY+H  +    +  +    G+F  T   IT+   SK + + GWRLG++    PS I+
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERT---ITVNGFSKTFAMTGWRLGFVAA--PSWII 251
Query: 276 QELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD----ICYDR 331
           + +     +K  +  ++ P TF+Q A  +  K+ +     K V+ +R   D    + + R
Sbjct: 252 ERM-----VKFQMYNATCPVTFIQYAAAKALKDERS---WKAVEEMRKEYDRRRKLVWKR 303
Query: 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--K 389
           + E+   T   KP+G+ ++  ++  + L       +F+  + KE  V V+PG A G   +
Sbjct: 304 LNEMGLPTV--KPKGAFYIFPRIRDTGLTS----KKFSELMLKEARVAVVPGSAFGKAGE 357
Query: 390 NWLRITFAIEPSALEEGLGRIK 411
            ++RI++A     LEE + R++
Sbjct: 358 GYVRISYATAYEKLEEAMERME 379

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 159/346 (45%), Gaps = 48/346 (13%)
Query: 80  DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139
           D Y+P  G+   R A+A+    E      P+ V +T+G  +A+ V+L  L  PG  +++ 
Sbjct: 55  DQYAPPAGLPALREALAEEFAVE------PESVVVTSGATEALYVLLQSLVGPGDEVVVL 108
Query: 140 KPGFPLY-------EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192
           +P F +Y        A AR  RL     DL PE G+ +DL  LE      T A+++  P 
Sbjct: 109 EPFFDVYLPDAFLAGAKARLVRL-----DLTPE-GFRLDLSALEKALTPRTRALLLNTPM 162
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
           NP G VF  ++L+ IA  AR   + +ISDEVYD L +G  P  R+  F       T+GS 
Sbjct: 163 NPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPR-RLREFAPER-TFTVGSA 220
Query: 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFK-NTKE 311
            KR    G+R+GW+V   P   +  L     ++ + + S+   T +Q  V +  K   +E
Sbjct: 221 GKRLEATGYRVGWIV--GPKEFMPRL---AGMRQWTSFSA--PTPLQAGVAEALKLARRE 273
Query: 312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQ 371
            F+  + +  R   D+    ++ +        PEG+ F+M +L      G       A +
Sbjct: 274 GFYEALREGYRRRRDLLAGGLRAMGLRVY--VPEGTYFLMAELP-----GWD-----AFR 321
Query: 372 LAKEESVIVLPGMAVGM----KNWLRITFAIEPSALE---EGLGRI 410
           L +E  V ++P  A  +    K+  R  F      L    E LGR+
Sbjct: 322 LVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRV 367

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 20/334 (5%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+   GI   R  IA  +       +SPD V +T G KQA+      L  PG  +++  P
Sbjct: 74  YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y          +   +    K ++  L+ +E L    T A++I +P NP G V+  
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261
           + L+ +   A+K    +ISDEVYD L +       + V      ++ +   SK   + GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 262 RLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321
           R+G+L++S+          V  I+ +   +S   T  Q A  +  +       S +V   
Sbjct: 254 RVGYLISSEKVATA-----VSKIQSH--TTSCINTVAQYAALKALEVDN----SYMVQTF 302
Query: 322 RDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL 381
           ++  +   +R+K++       +PEG+ ++  K+         DD++F  +L +E+ V ++
Sbjct: 303 KERKNFVVERLKKMGVKFV--EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALV 353
Query: 382 PGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415
           PG A     ++R++FA     L E L RI+ F  
Sbjct: 354 PGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 154/334 (46%), Gaps = 15/334 (4%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y P+ G    R AIA  L  +       D++ +T G KQ+I  ++  +  PG  +++P P
Sbjct: 63  YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y    +             E  ++V  + +       T  +V   P NP G V+T 
Sbjct: 123 FWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTP 182
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV--PVITLGSMSKRWIVP 259
            +++ IA+ A + G+ V+SDE+Y+ + +    ++ +G          +     +K + + 
Sbjct: 183 DEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMT 242
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319
           GWR+G+L     +G +  ++    I+G+   +S   TF Q      ++N+ +D   +++ 
Sbjct: 243 GWRVGFL-----AGPVPLVKAATKIQGH--STSNVCTFAQYGAIAAYENS-QDCVQEMLA 294
Query: 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379
              +      D +  +P + CP KP+G+ ++      S+ +     ++F  +L  +  V 
Sbjct: 295 AFAERRRYMLDALNAMPGLECP-KPDGAFYMFP----SIAKTGRSSLDFCSELLDQHQVA 349
Query: 380 VLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413
            +PG A G  + +R+++A +   ++ G+ R++ F
Sbjct: 350 TVPGAAFGADDCIRLSYATDLDTIKRGMERLEKF 383

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 147/338 (43%), Gaps = 32/338 (9%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+ S GIL  R  I++    +    + PD++ +T G    +   L+ +   G  +L+  P
Sbjct: 62  YTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNP 121
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +P Y+   R    +    D   E         LE    + T A++I +P NP G V   
Sbjct: 122 CYPCYKNFIRFLGAKPVFCDFTVE--------SLEEALSDKTKAIIINSPSNPLGEVID- 172
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261
              ++I E A +    +ISDE+Y+ L +    Y  +    +    I +   S  + + GW
Sbjct: 173 ---REIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGW 229
Query: 262 RLGWLVTSDPSGILQELRIVDSI-KGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320
           R+G+++++D         I+++I K   N+     T  Q A  + F+   E   + ++  
Sbjct: 230 RIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKE 281
Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV 380
                 +    +K+         P G+ +V   +         D  EFA +L KE+ V +
Sbjct: 282 FDRRRRLVLKYVKDFGWEV--NNPIGAYYVFPNIG-------EDGREFAYKLLKEKFVAL 332
Query: 381 LPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQR 416
            PG+  G   KN++RI++A     ++EGL RIK F  +
Sbjct: 333 TPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFLNK 370

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 20/322 (6%)
Query: 101 SELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHF 160
           S+L   + P+ +  T G   A  ++L  L  PG +++   P +       +    E+  +
Sbjct: 73  SQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLW 132
Query: 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
            +  E GW  DL+ L  L    T  + I N  NP G V     L+++ E A ++G  ++S
Sbjct: 133 QIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEVGAYILS 192
Query: 221 DEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280
           DEVY   +    P + + V+   + V    S+S  + +PG R+GW+  +         ++
Sbjct: 193 DEVYRSFSELDVPSI-IEVYDKGIAV---NSLSXTYSLPGIRIGWVAANH--------QV 240
Query: 281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC 340
            D ++ Y + +   A      V Q+     ++   +   IL +   I    I+E P ++ 
Sbjct: 241 TDILRDYRDYTXICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSY 300
Query: 341 PRKPEGSM-FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE 399
            R    S  FV + ++           +F LQL +E  V+++PG       ++R+ FA E
Sbjct: 301 IRPAVVSTSFVKIAVDXPX-------EDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACE 353
Query: 400 PSALEEGLGRIKAFCQRHAKQQ 421
              L +GL ++  F +R  K+ 
Sbjct: 354 QETLIKGLEKLSQFLRRFDKEN 375

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 159/358 (44%), Gaps = 51/358 (14%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP-K 140
           Y+ + G +  R AIA++LN+      + D++Y T G   ++ +    L     +  +   
Sbjct: 72  YTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIA 131
Query: 141 PGFPLYEA--NARHTRL-----EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193
           P FP Y+   NA   RL     +  HF        ++D D LE   + +T  ++I +P N
Sbjct: 132 PYFPEYKVFVNAAGARLVEVPADTEHF--------QIDFDALEERINAHTRGVIINSPNN 183
Query: 194 PCGNVFTYQQLQKIAE----KARKLG--IMVISDEVYDHLTFGS--TPYVRMGVFGSTVP 245
           P G V++ + ++K+++    K++++G  I +I+DE Y  + +     P+V    + +T  
Sbjct: 184 PSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV-TKYYDNT-- 240
Query: 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI 305
            +   S SK   +PG R+G+++  D         + D  + Y  +            P +
Sbjct: 241 -LVCYSYSKSLSLPGERIGYVLVPD--------EVYDKAELYAAVCGAGRALGYVCAPSL 291
Query: 306 FKN--TKEDFFSKIVDILRDTADICYDRIKEI--PCITCPRKPEGSMFVMVKLNLSLLEG 361
           F+    K    +  ++  ++  D+ Y+ +  I   C     KP+G+ +  VK        
Sbjct: 292 FQKXIVKCQGATGDINAYKENRDLLYEGLTRIGYHCF----KPDGAFYXFVK-------A 340
Query: 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
           + DD     + AKEE V+++     G   W+RI++ ++   ++      +   +++ K
Sbjct: 341 LEDDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYKKYNK 398

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 146/339 (43%), Gaps = 22/339 (6%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+P  GI   R A+A+    E    ++P++  +T G KQA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y    R     +   + LPE+G+  D + +       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
           + L+ +A  A +    ++SDE+Y+HL +    +      G   P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
           GWR+G+     P  +++ +  V S       ++ P T  Q A  +   N +    F    
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
            +  R   D+  + +  +       +P G+ +V++  +      I+ D   A +   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
           V V+PG        +R+++A     L + L R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 30/294 (10%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           YS S GI   R A A Y        + P++V +T G  +AI     V+A PG  IL+ +P
Sbjct: 75  YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y A A+   +++       E+G+ +    LE+  +E T  +V+ NP NP G V+  
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRW 256
            + + + E A + G+ +I DEVY  + F        G F S +      V+ + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQ-GAVPQIFKNTKEDFFS 315
              G R+G L+T +   I    ++    +G L     P    Q G+V  +  N  + FF 
Sbjct: 247 SACGARVGCLITRNEELISHAXKLA---QGRL----APPLLEQIGSVGLL--NLDDSFFD 297
Query: 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
            + +  R+  +    +++E   +    KP G+ ++  +L       + D  EFA
Sbjct: 298 FVRETYRERVETVLKKLEE-HGLKRFTKPSGAFYITAELP------VEDAEEFA 344

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 145/339 (42%), Gaps = 22/339 (6%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+P  GI   R A+A+    E    ++P++  +T G  QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y    R     +   + LPE+G+  D + +       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
           + L+ +A  A +    ++SDE+Y+HL +    +      G   P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
           GWR+G+     P  +++ +  V S       ++ P T  Q A  +   N +    F    
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
            +  R   D+  + +  +       +P G+ +V++  +      I+ D   A +   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
           V V+PG        +R+++A     L + L R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 22/333 (6%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+P  GI   R A+A+    E    ++P++  +T G KQA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y    R     +   + LPE+G+  D + +       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
           + L+ +A  A +    ++SDE+Y+HL +    +      G   P   +T+   +  + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
           GWR+G+     P  +++ +  V S       ++ P T  Q A  +   N +    F    
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
            +  R   D+  + +  +       +P G+ +V++  +      I+ D   A +   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRI 410
           V V+PG        +R+++A     L + L R 
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERF 378

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+P  GI   R A+A+    E    ++P++  +T G  QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y    R     +   + LPE+G+  D + +       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
           + L+ +A  A +    ++SDE+Y+HL +    +      G   P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
           GWR+G+     P  +++ +  V         ++ P T  Q A  +   N +    F    
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
            +  R   D+  + +  +       +P G+ +V++  +      I+ D   A +   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
           V V+PG        +R+++A     L + L R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+P  GI   R A+A+    E    ++P++  +T G  QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y    R     +   + LPE+G+  D + +       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
           + L+ +A  A +    ++SDE+Y+HL +    +      G   P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
           GWR+G+     P  +++ +  V         ++ P T  Q A  +   N +    F    
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
            +  R   D+  + +  +       +P G+ +V++  +      I+ D   A +   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
           V V+PG        +R+++A     L + L R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y+P  GI   R A+A+    E    ++P++  +T G  QA+  +   +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +  Y    R     +   + LPE+G+  D + +       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
           + L+ +A  A +    ++SDE+Y+HL +    +      G   P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
           GWR+G+     P  +++ +  V         ++ P T  Q A  +   N +    F    
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
            +  R   D+  + +  +       +P G+ +V++  +      I+ D   A +   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
           V V+PG        +R+++A     L + L R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 148/345 (42%), Gaps = 38/345 (11%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPD---DVYLTAGCKQAIQVILTVLARPGANILL 138
           Y+P  G+   R AIA    +E      PD   D+ +TAG  +A+   +T L R G  ++ 
Sbjct: 63  YAPMTGVQALREAIAQ--KTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 139 PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNV 198
             P +  Y      +   ++   L P   + VD     AL  E T  +++  P NP   V
Sbjct: 121 FDPSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEFAALLSERTRLVILNTPHNPSATV 179
Query: 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWI 257
           +       + +      I VISDEVY+H+ F    +  +          + + S  K + 
Sbjct: 180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH 239
Query: 258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKI 317
           + GW++G+ V   P+ I  E+R    +  YL  S    T  Q A+  + +   E + + +
Sbjct: 240 MTGWKVGYCVA--PAPISAEIR---KVHQYLTFSVN--TPAQLALADMLRAEPEHYLA-L 291
Query: 318 VDILRDTADICYDRIKE-----IPCITCPRKPEGSMFVMVKLN-LSLLEGISDDMEFALQ 371
            D  R   DI  + + E     +PC       EG+ F++V  + +S L    DD+EF   
Sbjct: 292 PDFYRQKRDILVNALNESRLEILPC-------EGTYFLLVDYSAVSTL----DDVEFCQW 340
Query: 372 LAKEESVIVLPGMAVGMKN-----WLRITFAIEPSALEEGLGRIK 411
           L +E  V  +P ++V   +      +R+ FA + S L     R++
Sbjct: 341 LTQEHGVAAIP-LSVFCADPFPHKLIRLCFAKKESTLLAAAERLR 384

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 31/294 (10%)
Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK---- 166
           +V +T G  +A+   +      G  +++ +P F  YE   +      R   L P K    
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 167 ----GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
                W +D + LEAL +E T  ++I  P NP G V    +L+ +A   +K  ++ +SDE
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE 222
Query: 223 VYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           VY+H+ F    ++R+    G     IT+GS  K + + GW++GW     P  +L+ L++V
Sbjct: 223 VYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW--AYGPEALLKNLQMV 280
Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKN------TKEDFFSKIVDILRDTADICYDRIKEI 335
                + N     AT +Q A+   F+       + E +F+ I   L    D     + E+
Sbjct: 281 -----HQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335
Query: 336 PCITCPRKPEGSMFVMV-------KLNLSLLEGISDDMEFALQLAKEESVIVLP 382
                P  P+G  F++        K++L+       D  F   + K   +  +P
Sbjct: 336 G--MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP 387

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 31/294 (10%)
Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK---- 166
           +V +T G  +A+   +      G  +++ +P F  YE   +      R   L P K    
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 167 ----GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
                W +D + LEAL +E T  ++I  P NP G V    +L+ +A   +K  ++ +SDE
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE 222
Query: 223 VYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           VY+H+ F    ++R+    G     IT+GS    + + GW++GW     P  +L+ L++V
Sbjct: 223 VYEHMVFEPFEHIRICTLPGMWERTITIGSAGXTFSLTGWKIGW--AYGPEALLKNLQMV 280
Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKN------TKEDFFSKIVDILRDTADICYDRIKEI 335
                + N     AT +Q A+   F+       + E +F+ I   L    D     + E+
Sbjct: 281 -----HQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335
Query: 336 PCITCPRKPEGSMFVMV-------KLNLSLLEGISDDMEFALQLAKEESVIVLP 382
                P  P+G  F++        K++L+       D  F   + K   +  +P
Sbjct: 336 G--MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP 387

>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum Vulgare Length = 500

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 155/338 (45%), Gaps = 36/338 (10%)
Query: 81  CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN-ILLP 139
            YS S GI   R AIA  + S      + DD++LT G    + +++ +L R   + IL+P
Sbjct: 129 AYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVP 188
Query: 140 KPGFPLYEAN-ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPG 192
            P +PLY A+ A H    + ++ L    GW ++   ++   ++      N  A+V++NPG
Sbjct: 189 IPQYPLYSASIALHGGALVPYY-LNESTGWGLETSDVKKQLEDARSRGINVRALVVINPG 247
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVY------DHLTFGSTPYV--RMGVFGSTV 244
           NP G V   +    I +  +  G+++++DEVY      D+  F S   +   +G     +
Sbjct: 248 NPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDL 307
Query: 245 PVITLGSMSKRWIVP-GWRLGWL-VTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV 302
           P+++  S+SK +    G R G+  +T   + + +++  + S+    NI+      +   V
Sbjct: 308 PLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNIT---GQILASLV 364
Query: 303 PQIFKNTKEDFFS------KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356
               K + E + S       I+  L   A        ++  ITC  + EG+M+V  ++ L
Sbjct: 365 MNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC-NEAEGAMYVFPQICL 423
Query: 357 -------SLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
                  +     + D  +AL+L +   ++V+PG   G
Sbjct: 424 PQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461

>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase (Msat) From Thermococcus Profundus Length = 417

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 154/353 (43%), Gaps = 31/353 (8%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y  + G  P R A+A ++       +S  ++   AG +QA+ +I  V   PG  I++   
Sbjct: 79  YGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEA- 137
Query: 142 GFPLYEANARHTRLEIRHFDLLP--EKGWEVDLDGLEALADEN-----TVAMVIVNPGNP 194
             P Y A  +  +     F  +P  +KG  VDL   +            +   +    NP
Sbjct: 138 --PTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNP 195
Query: 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254
            G   +  + +K+ E A +   +++ D  Y  L +   P   +  F     VI LG+ SK
Sbjct: 196 AGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK 255
Query: 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-EDF 313
             + PG+R+GW V + P  I    R ++  K  +++ +   TF Q    +  +N   ++ 
Sbjct: 256 -ILAPGFRIGW-VAAHPHLI----RKMEIAKQSIDLCTN--TFGQAIAWKYVENGYLDEH 307
Query: 314 FSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQL 372
             KI++  +   D   + ++E +P      KPEG MFV V    +L EGI  D +  ++ 
Sbjct: 308 IPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRV----TLPEGI--DTKLMMER 361
Query: 373 AKEESVIVLPGMAVGM----KNWLRITFAIEP-SALEEGLGRIKAFCQRHAKQ 420
           A  + V  +PG A  +    KN +R+ F   P   + EG+ R+    +   K+
Sbjct: 362 AVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMKR 414

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 147/326 (45%), Gaps = 34/326 (10%)
Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPE-K 166
           +V +T G  +AI   +  L  PG+ +LL +P +  Y    A A   R+ +    L+P+ +
Sbjct: 88  EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTV---PLVPDGR 144
Query: 167 GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226
           G+ +D D L       T A++I +P NP G V +  +L  IAE A    ++VI+DEVY+H
Sbjct: 145 GFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEH 204
Query: 227 LTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285
           L F    ++ +  F G     IT+ S +  +   GW++GW     P+ ++  +R   + K
Sbjct: 205 LVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW--ACGPAELIAGVR---AAK 259
Query: 286 GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345
            YL+   G A F Q AV  +  +T++ + + + + LR   D     + EI          
Sbjct: 260 QYLSYVGG-APF-QPAV-ALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAV--HDSY 314
Query: 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP---------GMAVGMKN-W---L 392
           G+ F+          G  D  EF   L ++  V  +P         G A    + W   +
Sbjct: 315 GTYFLCADPRPL---GYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLV 371
Query: 393 RITFAIEPSALEEGLGRIKAFCQRHA 418
           R TF      L+E + R+    +R A
Sbjct: 372 RFTFCKRDDTLDEAIRRLSVLAERPA 397

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 144/360 (40%), Gaps = 39/360 (10%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           YSP+ G      ++    +     +L  ++V +T G  + I   L  L   G  +++ +P
Sbjct: 91  YSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEP 150
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKG----------WEVDLDGLEALADENTVAMVIVNP 191
            F  Y  N      ++ +  + P K           W +D +  E      T A++I  P
Sbjct: 151 FFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP 210
Query: 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL-- 249
            NP G VFT ++L  +     K  +++ISDEVY+HL F  + + R+      +  +TL  
Sbjct: 211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTLTV 269
Query: 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKN 308
           GS    +   GWR+GW+++      L    +  + K +  I  + P+   +     I   
Sbjct: 270 GSAGXSFAATGWRIGWVLS------LNAELLSYAAKAHTRICFASPSPLQEACANSINDA 323
Query: 309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL-------EG 361
            K  +F K+     +   I      E+        PEG+ FV+V  +   +       E 
Sbjct: 324 LKIGYFEKMRQEYINKFKIFTSIFDELGLPYT--APEGTYFVLVDFSKVKIPEDYPYPEE 381
Query: 362 ISD---DMEFALQLAKEESVIVLPGMAVGMK-------NWLRITFAIEPSALEEGLGRIK 411
           I +   D   +  L  E  V+ +P     +K       N LR     + + LE  + R+K
Sbjct: 382 ILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLK 441

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 153/365 (41%), Gaps = 42/365 (11%)
Query: 46  IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEF--DCYSPSVGILPARRAIADYLNSEL 103
           ++ LG G P  FP     P           S +F  + Y+ + G  P  + +A +    L
Sbjct: 30  VVNLGQGFPD-FP----PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELL 84
Query: 104 PCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-----ANARHTRLE- 156
             ++ P  +V +T G   A+      L   G  +++ +P F  YE     A  R   +  
Sbjct: 85  GQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL 144
Query: 157 ----IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
               I++ +L     W++D   L       T A+V+  P NP G VF+ ++L+ +A   +
Sbjct: 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQ 204
Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
           +  ++ I+DEVY  + +    ++ +    G     +T+GS  K +   GW++GW++   P
Sbjct: 205 QHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVL--GP 262
Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK------EDFFSKIVDILRDTA 325
             I++ LR V     + N      T  Q AV + F+  +        +F +    ++   
Sbjct: 263 DHIMKHLRTV-----HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317
Query: 326 DICYDRIKEIPCITCPRKPEGSMFVMV-----KLNLSLLEGISD---DMEFALQLAKEES 377
           D     ++ +     P  P+GS F++      K  +  L G  D   D  F   + K + 
Sbjct: 318 DHMIRSLQSVGL--KPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKG 375
Query: 378 VIVLP 382
           ++ +P
Sbjct: 376 LVAIP 380

>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp Length = 498

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 162/373 (43%), Gaps = 49/373 (13%)
Query: 82  YSPSVGILPARRAIADYL---NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN--- 135
           YS S G+   R  +A Y+   +  +P    PD++YLT G    I  IL +L   G     
Sbjct: 125 YSASQGVNCIREDVAAYITRRDGGVPA--DPDNIYLTTGASDGISTILKILVSGGGKSRT 182
Query: 136 -ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NTVAMVIV 189
            +++P P +PLY A          ++ L  E  W ++++ L     E     +   + I+
Sbjct: 183 GVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCII 242
Query: 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHL--------TFGSTPYVRMGVF 240
           NPGNP G V + + ++ +   A +  + +++DEVY D++        +F    Y     +
Sbjct: 243 NPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEY 302
Query: 241 GSTVPVITLGSMSKRWIVP-GWRLGWL----VTSDPSGILQEL---RIVDSIKGY--LNI 290
            S V + +  S SK ++   G+R G++    +  +  G L +L   R+   + G   ++I
Sbjct: 303 SSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDI 362
Query: 291 SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV 350
              P    + +  Q F   KE     +    + T D+      ++P I C    +G+M+ 
Sbjct: 363 VVNPPVAGEESFEQ-FSREKESVLGNLAKKAKLTEDL----FNQVPGIHC-NPLQGAMYA 416
Query: 351 MVKLNL-------SLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN---WLRITFAIEP 400
             ++ +       +    ++ DM + ++L +E  + V+PG   G +      R+T     
Sbjct: 417 FPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPV 476
Query: 401 SALEEGLGRIKAF 413
             L+  L ++K F
Sbjct: 477 EKLKTVLQKVKDF 489

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 142/353 (40%), Gaps = 31/353 (8%)
Query: 75  RSAEFDC--YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP 132
           +S E D   Y+ ++G+   R+ IA          L P  V +T G      +  T L   
Sbjct: 55  KSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDS 114
Query: 133 GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE---VDLDGLEALADENTVAMVIV 189
           G  + +  PG+P Y    R   L        PE   +    D  GL      +   + + 
Sbjct: 115 GDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL------DLAGLXVA 168
Query: 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249
           +P NP G    +     + E A+  G   ISDE+Y  + + +     + +   T     +
Sbjct: 169 SPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL---TDECYVI 225
Query: 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT 309
            S SK +   GWR+GW V  +      ++R+V+ I     I +  A+     V  +    
Sbjct: 226 NSFSKYFSXTGWRVGWXVVPE-----DQVRVVERIAQNXFICAPHAS----QVAALAALD 276
Query: 310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
            +      +D+ +    +  +R+ +    T    P+G+ +V   ++    +   D   FA
Sbjct: 277 CDAELQANLDVYKANRKLXLERLPKA-GFTRIAPPDGAFYVYADVS----DLTDDSRAFA 331
Query: 370 LQLAKEESVIVLPGMAVGMK---NWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
            ++ ++  V V PG+    +     LR ++A   + +EEGL R++AF Q   +
Sbjct: 332 AEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFXQARGE 384

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 38/342 (11%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           YSP+ G  P R  +A+++       + P++V +T G +QA+ ++  V    G+ +LL  P
Sbjct: 70  YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG--NPCGNVF 199
               Y    +  RL+   F  +P      DLD LE +        + + P   NP G + 
Sbjct: 124 S---YMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVFGSTVP-VITLGSMSKRW 256
                +++ +   + G++V+ D+ Y  L FG    P +      +  P VI LGS SK  
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 257 IVPGWRLGWLVTSDPS--GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFF 314
           + PG R+ + V    +   ++Q  +  D     LN         Q  V ++ K    +  
Sbjct: 240 LSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLN---------QMLVHELLKEGFSERL 290
Query: 315 SKIVDILRDTADICYDRI-KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLA 373
            ++  + R+ A      + +E+P      +P+G MFV ++L     +G+S +  F  + A
Sbjct: 291 ERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELP----KGLSAEGLF--RRA 344
Query: 374 KEESVIVLPGMAV----GMKNWLRITFA-IEPSALEEGLGRI 410
            EE+V  +PG       G +N LR+++A ++   + EG+ R+
Sbjct: 345 LEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRL 386

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTR-------LEIRHFDL 162
           +++ +  G   ++   +  L  PG  +++  P +  YE   R          L  +  D 
Sbjct: 86  EEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145
Query: 163 LP--EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
           +      W  D   LE+     T A+++  P NP G V+T Q+LQ IA+   K   + IS
Sbjct: 146 MKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205
Query: 221 DEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
           DEVY+ L +    +V++    G     IT+GS  K + V GW+LGW +   P+ +++ L+
Sbjct: 206 DEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSI--GPAHLIKHLQ 263
Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIF------KNTKEDFFS---KIVDILRDTADICYD 330
            V     Y       AT +Q A+ + F       +  E +F+   K +++ RD      +
Sbjct: 264 TVQQNSFYTC-----ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLN 318
Query: 331 RIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD-------DMEFALQLAKEESVIVLP 382
            +   P +     P+G  F++  ++ SL   +SD       D +F   + K + +  +P
Sbjct: 319 SVGLKPIV-----PDGGYFIIADVS-SLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIP 371

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 42/365 (11%)
Query: 46  IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEF--DCYSPSVGILPARRAIADYLNSEL 103
           ++ LG G P  FP     P           S +F  + Y+ + G  P  + +A +    L
Sbjct: 30  VVNLGQGFPD-FP----PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELL 84
Query: 104 PCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-----ANARHTRLE- 156
             ++ P  +V +T G   A+      L   G  +++ +P F  YE     A  R   +  
Sbjct: 85  GQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL 144
Query: 157 ----IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
               I++ +L     W++D   L       T A+V+  P NP G VF+ ++L+ +A   +
Sbjct: 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQ 204
Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
           +  ++ I+DEVY  + +    ++ +    G     +T+GS    +   GW++GW++   P
Sbjct: 205 QHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVL--GP 262
Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK------EDFFSKIVDILRDTA 325
             I++ LR V     + N      T  Q AV + F+  +        +F +    ++   
Sbjct: 263 DHIMKHLRTV-----HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317
Query: 326 DICYDRIKEIPCITCPRKPEGSMFVMV-----KLNLSLLEGISD---DMEFALQLAKEES 377
           D     ++ +     P  P+GS F++      K  +  L G  D   D  F   + K + 
Sbjct: 318 DHMIRSLQSVGL--KPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKG 375
Query: 378 VIVLP 382
           ++ +P
Sbjct: 376 LVAIP 380

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 42/365 (11%)
Query: 46  IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEF--DCYSPSVGILPARRAIADYLNSEL 103
           ++ LG G P  FP     P           S +F  + Y+ + G  P  + +A +    L
Sbjct: 30  VVNLGQGFPD-FP----PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELL 84
Query: 104 PCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-----ANARHTRLE- 156
             ++ P  +V +T G   A+      L   G  +++ +P F  YE     A  R   +  
Sbjct: 85  GQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL 144
Query: 157 ----IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
               I++ +L     W++D   L       T A+V+  P NP G VF+ ++L+ +A   +
Sbjct: 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQ 204
Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
           +  ++ I+DEVY  + +    ++ +    G     +T+GS    +   GW++GW++   P
Sbjct: 205 QHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVL--GP 262
Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK------EDFFSKIVDILRDTA 325
             I++ LR V     + N      T  Q AV + F+  +        +F +    ++   
Sbjct: 263 DHIMKHLRTV-----HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317
Query: 326 DICYDRIKEIPCITCPRKPEGSMFVMV-----KLNLSLLEGISD---DMEFALQLAKEES 377
           D     ++ +     P  P+GS F++      K  +  L G  D   D  F   + K + 
Sbjct: 318 DHMIRSLQSVGL--KPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKG 375
Query: 378 VIVLP 382
           ++ +P
Sbjct: 376 LVAIP 380

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 40/356 (11%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y  + G  P R  +  +L          +D+ +T+G +QA+ +I  V   PG  +++  P
Sbjct: 114 YGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAP 172
Query: 142 -------GFPLYEANARHTRL--EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192
                   F  YE       L  E    ++L EK     L  L++   +  V   +    
Sbjct: 173 TYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVPTFQ 227
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
           NP G      + + + E A +   +V+ D+ Y  L +   P  ++    +   VI LG+ 
Sbjct: 228 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 287
Query: 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV---PQIFKNT 309
           SK  + PG+R+GW+V  DP GI++++ I          S+   T V G V     +    
Sbjct: 288 SK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQ-------STDLCTNVFGQVVAWRYVDGGY 337
Query: 310 KEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF 368
            E    +I    +   D   + ++E +P      KPEG MF+ V    +L +GI  D + 
Sbjct: 338 LEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWV----TLPDGI--DSKK 391
Query: 369 ALQLAKEESVIVLPGMAV----GMKNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419
            L+ A ++ V  +PG A      +KN +R+ F  ++   + EG+ R+    +   K
Sbjct: 392 MLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 40/356 (11%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y  + G  P R  +  +L          +D+ +T+G +QA+ +I  V   PG  +++  P
Sbjct: 69  YGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAP 127
Query: 142 -------GFPLYEANARHTRL--EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192
                   F  YE       L  E    ++L EK     L  L++   +  V   +    
Sbjct: 128 TYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVPTFQ 182
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
           NP G      + + + E A +   +V+ D+ Y  L +   P  ++    +   VI LG+ 
Sbjct: 183 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 242
Query: 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV---PQIFKNT 309
           SK  + PG+R+GW+V  DP GI++++ I          S+   T V G V     +    
Sbjct: 243 SK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQ-------STDLCTNVFGQVVAWRYVDGGY 292
Query: 310 KEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF 368
            E    +I    +   D   + ++E +P      KPEG MF+ V    +L +GI  D + 
Sbjct: 293 LEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWV----TLPDGI--DSKK 346
Query: 369 ALQLAKEESVIVLPGMAV----GMKNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419
            L+ A ++ V  +PG A      +KN +R+ F  ++   + EG+ R+    +   K
Sbjct: 347 MLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 402

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 39/299 (13%)
Query: 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTR-------LEIRHFDL 162
           +++ +  G   ++   +  L  PG  +++  P +  YE   R          L  +  D 
Sbjct: 86  EEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145
Query: 163 LP--EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
           +      W  D   LE+     T A+++  P NP G V+T Q+LQ IA+   K   + IS
Sbjct: 146 MKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205
Query: 221 DEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
           DEVY+ L +    +V++    G     IT+GS    + V GW+LGW +   P+ +++ L+
Sbjct: 206 DEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSI--GPAHLIKHLQ 263
Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIF------KNTKEDFFS---KIVDILRDTADICYD 330
            V     Y       AT +Q A+ + F       +  E +F+   K +++ RD      +
Sbjct: 264 TVQQNSFYTC-----ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLN 318
Query: 331 RIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD-------DMEFALQLAKEESVIVLP 382
            +   P +     P+G  F++  ++ SL   +SD       D +F   + K + +  +P
Sbjct: 319 SVGLKPIV-----PDGGYFIIADVS-SLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIP 371

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 148/356 (41%), Gaps = 20/356 (5%)
Query: 46  IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           II L  G+P       T P          +  +   YS S GI   RRAI+ +       
Sbjct: 39  IIDLSMGNPDG----PTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDV 94
Query: 106 KLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
           ++ P+ +  +T G K+ +  ++      G  IL+P P +P++   A     ++R   L+P
Sbjct: 95  QIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVP 154
Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
              +  +L+     +      M++  P NP          +++   A++  +MV+ D  Y
Sbjct: 155 GIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAY 214
Query: 225 DHLTFGS--TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282
             + +     P + M V G+    +   ++SK + + GWR+G++V     G  + +  + 
Sbjct: 215 ADIVYDGWKAPSI-MQVPGAKDIAVEFFTLSKSYNMAGWRIGFMV-----GNPELVSALA 268
Query: 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342
            IK Y +   G  T +Q A     +  ++     I    +   D+    ++E   +    
Sbjct: 269 RIKSYHDY--GTFTPLQVAAIAALEGDQQ-CVRDIARQYQQRRDVLVKGLREAGWMV--E 323
Query: 343 KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAI 398
            P+ SM+V  K+        S  +EFA +L ++  V V PG+  G      + FA+
Sbjct: 324 NPKASMYVWAKIPEPYAHLGS--LEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFAL 377

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 43/366 (11%)
Query: 77  AEFDCYSPSVGILPARRAIADYLNSELPCKLS--PDDVYLTAGCKQAIQVILTVLARPGA 134
           AE   +    G+   ++A+ D++      K++  P+ + LTAG   A +  +  LA PG 
Sbjct: 77  AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 136
Query: 135 NILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMV 187
            +L+P P +P ++ + +  T +EI         G+++    LE    E          ++
Sbjct: 137 AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL 196
Query: 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF------ 240
           + NP NP G   T  +L  +       GI +ISDE+Y    F S  ++  M V       
Sbjct: 197 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCD 256
Query: 241 -GSTV--PVITLGSMSKRWIVPGWRLGWLVTSDPSGI-----LQELRIVDS-IKGYLNIS 291
             S V   V  + S+SK   +PG+R+G + ++D   +     +    +V S  +  L+  
Sbjct: 257 ENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAM 316
Query: 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351
                  +  + +  K  K+    K+V  L+ +             I+C     G +F  
Sbjct: 317 LSDKKLTKNYIAENHKRLKQR-QKKLVSGLQKSG------------ISCLNGNAG-LFCW 362
Query: 352 VKLNLSLLEGISD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFAIEPS-ALEEGL 407
           V +   L     + +ME   ++  E  + + PG +       W R+ FA  P   L+  +
Sbjct: 363 VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM 422
Query: 408 GRIKAF 413
            R+KAF
Sbjct: 423 QRLKAF 428

>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase Length = 429

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 43/366 (11%)
Query: 77  AEFDCYSPSVGILPARRAIADYLNSELPCKLS--PDDVYLTAGCKQAIQVILTVLARPGA 134
           AE   +    G+   ++A+ D++      K++  P+ + LTAG   A +  +  LA PG 
Sbjct: 75  AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 134
Query: 135 NILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMV 187
            +L+P P +P ++ + +  T +EI         G+++    LE    E          ++
Sbjct: 135 AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL 194
Query: 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF------ 240
           + NP NP G   T  +L  +       GI +ISDE+Y    F S  ++  M V       
Sbjct: 195 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCD 254
Query: 241 -GSTV--PVITLGSMSKRWIVPGWRLGWLVTSDPSGI-----LQELRIVDS-IKGYLNIS 291
             S V   V  + S+SK   +PG+R+G + ++D   +     +    +V S  +  L+  
Sbjct: 255 ENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAM 314
Query: 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351
                  +  + +  K  K+    K+V  L+ +             I+C     G +F  
Sbjct: 315 LSDKKLTKNYIAENHKRLKQR-QKKLVSGLQKSG------------ISCLNGNAG-LFCW 360
Query: 352 VKLNLSLLEGISD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFAIEPS-ALEEGL 407
           V +   L     + +ME   ++  E  + + PG +       W R+ FA  P   L+  +
Sbjct: 361 VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM 420
Query: 408 GRIKAF 413
            R+KAF
Sbjct: 421 QRLKAF 426

>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine Length = 435

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 43/366 (11%)
Query: 77  AEFDCYSPSVGILPARRAIADYLNSELPCKLS--PDDVYLTAGCKQAIQVILTVLARPGA 134
           AE   +    G+   ++A+ D++      K++  P+ + LTAG   A +  +  LA PG 
Sbjct: 77  AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 136
Query: 135 NILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMV 187
            +L+P P +P ++ + +  T +EI         G+++    LE    E          ++
Sbjct: 137 AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL 196
Query: 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF------ 240
           + NP NP G   T  +L  +       GI +ISDE+Y    F S  ++  M V       
Sbjct: 197 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCD 256
Query: 241 -GSTV--PVITLGSMSKRWIVPGWRLGWLVTSDPSGI-----LQELRIVDS-IKGYLNIS 291
             S V   V  + S+SK   +PG+R+G + ++D   +     +    +V S  +  L+  
Sbjct: 257 ENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAM 316
Query: 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351
                  +  + +  K  K+    K+V  L+ +             I+C     G +F  
Sbjct: 317 LSDKKLTKNYIAENHKRLKQR-QKKLVSGLQKSG------------ISCLNGNAG-LFCW 362
Query: 352 VKLNLSLLEGISD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFAIEPS-ALEEGL 407
           V +   L     + +ME   ++  E  + + PG +       W R+ FA  P   L+  +
Sbjct: 363 VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM 422
Query: 408 GRIKAF 413
            R+KAF
Sbjct: 423 QRLKAF 428

>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus Anginosus: Internal Aldimine Form Length = 392

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 142/328 (43%), Gaps = 24/328 (7%)
Query: 93  RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
           +A+ D+  SE       +D+    G   AI + +    + G  +L+  P +P +  + R 
Sbjct: 73  QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 153 TRLEIRHFDLLPEKG-WEVDLDGLEALADENTVAMVIV-NPGNPCGNVFTYQQLQKIAEK 210
              ++    L  E G +++D + LE    EN V + ++ NP NP G V+  + L++I   
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192
Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGW 265
            +K  ++++SDE++  LT     +V    F +  P      + L S +K + + G +  +
Sbjct: 193 CQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249
Query: 266 LVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325
            +  +P+ +  + +    +  +  +SS      + A         + +   +  +L +  
Sbjct: 250 AIIENPT-LCAQFKHQQLVNNHHEVSSLGYIATETAY-----RYGKPWLVALKAVLEENI 303
Query: 326 DICYDRI-KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM 384
               +   +E P +    KP+G+  + +  +     G++DD  F L L  +  VI+  G 
Sbjct: 304 QFAVEYFAQEAPRLKV-MKPQGTYLIWLDFSDY---GLTDDALFTL-LHDQAKVILNRGS 358
Query: 385 AVGMKNWL--RITFAIEPSALEEGLGRI 410
             G +  L  R+  A   S +EE   RI
Sbjct: 359 DYGSEGELHARLNIAAPKSLVEEICKRI 386

>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 150/348 (43%), Gaps = 50/348 (14%)
Query: 82  YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
           YSPS GI   L   + +   L++       P     D+ +T+G +Q +  +  ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
           N+LL +P +      L+        +      ++P+        W+ + D      +   
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTP-YVRMGVF 240
               + N  NP GN  T ++ ++I E ARK   ++I D+ Y  L F  G  P ++ M V 
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
           G    VI   S SK  I  G R+G+L    P        +++ +  ++ +S+  P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
             + Q+     E+ F   VD + D      D I     K +  +     P   MF+ +K 
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
               ++GI+D  E   + A +  V++LPG A  + +     +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 155/363 (42%), Gaps = 51/363 (14%)
Query: 81  CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140
            Y+P+ GI   R  +A +L      ++SP+++ +T G   A+ ++  VL  PG  ++   
Sbjct: 70  MYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITEN 129
Query: 141 PGF-----PLYEANARHTRLEIRH----FDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191
           P +        +  A+   + + +     DLL EK  E     L+A   +  +   I   
Sbjct: 130 PSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKE-----LKAKGQKVKLIYTIPTG 184
Query: 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGS 251
            NP G   + ++ + + E A K  +++I D  Y+ + +     V +    +   VI  G+
Sbjct: 185 QNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGT 244
Query: 252 MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI--FKNT 309
           +SK  +  G+R+GW++      IL+++           +   P  F   A+ Q    +  
Sbjct: 245 LSK-VLGTGFRIGWIIAE--GEILKKVL----------MQKQPIDFCAPAISQYIALEYL 291
Query: 310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPR--------KPEGSMFVMVKLNLSLLEG 361
           K  +F K      + A + Y   ++I               KP   MFVM      L EG
Sbjct: 292 KRGYFEK---YHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVM----FFLPEG 344
Query: 362 ISDDMEFALQLAKEESVIVLPGMAV----GMKNWLRITFAIEPSALEEGLGRIKAFCQRH 417
            +D + FA +L + E V+V+PG         KN +R+ F+  PS  E  +G IK   + +
Sbjct: 345 -ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS-RPSKEEIPIG-IKKLAKLY 401
Query: 418 AKQ 420
            ++
Sbjct: 402 KEK 404

>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 150/348 (43%), Gaps = 50/348 (14%)
Query: 82  YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
           YSPS GI   L   + +   L++       P     D+ +T+G +Q +  +  ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
           N+LL +P +      L+        +      ++P+        W+ + D      +   
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTP-YVRMGVF 240
               + N  NP GN  T ++ ++I E ARK   ++I D+ Y  L F  G  P ++ M V 
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
           G    VI   S SK  I  G R+G+L    P        +++ +  ++ +S+  P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
             + Q+     E+ F   VD + D      D I     K +  +     P   MF+ +K 
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
               ++GI+D  E   + A +  V++LPG A  + +     +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403

>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex Length = 425

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 50/348 (14%)
Query: 82  YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
           YSPS GI   L   + +   L++       P     D+ +T+G +Q +  +  ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
           N+LL +P +      L+        +      ++P+        W+ + D      +   
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
               + N  NP GN  T ++ ++I E ARK   ++I D+ Y  L F       ++ M V 
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
           G    VI   S SK  I  G R+G+L    P        +++ +  ++ +S+  P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
             + Q+     E+ F   VD + D      D I     K +  +     P   MF+ +K 
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
               ++GI+D  E   + A +  V++LPG A  + +     +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403

>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 50/348 (14%)
Query: 82  YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
           YSPS GI   L   + +   L++       P     D+ +T+G +Q +  +  ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
           N+LL +P +      L+        +      ++P+        W+ + D      +   
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
               + N  NP GN  T ++ ++I E ARK   ++I D+ Y  L F       ++ M V 
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
           G    VI   S SK  I  G R+G+L    P        +++ +  ++ +S+  P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
             + Q+     E+ F   VD + D      D I     K +  +     P   MF+ +K 
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
               ++GI+D  E   + A +  V++LPG A  + +     +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403

>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase Ii In Complex With Kynurenine Length = 425

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 50/348 (14%)
Query: 82  YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
           YSPS GI   L   + +   L++       P     D+ +T+G +Q +  +  ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
           N+LL +P +      L+        +      ++P+        W+ + D      +   
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
               + N  NP GN  T ++ ++I E ARK   ++I D+ Y  L F       ++ M V 
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
           G    VI   S SK  I  G R+G+L    P        +++ +  ++ +S+  P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
             + Q+     E+ F   VD + D      D I     K +  +     P   MF+ +K 
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
               ++GI+D  E   + A +  V++LPG A  + +     +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403

>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase From Clostridium Difficile 630 Crystallized With Magnesium Formate Length = 391

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 17/326 (5%)
Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
             +I ++L      K+  + +  + G   AI +++  L +    I++ +P +  + +  +
Sbjct: 73  NESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVK 132
Query: 152 HTRLE--IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE 209
           +   E  I     L    + +D + +E    ++    ++ NP NP G V+T  +L+K+ +
Sbjct: 133 NNNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGD 191
Query: 210 KARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLV 267
              K  + +ISDE++  +      ++ M          T+  M  +K + + G +  ++V
Sbjct: 192 ICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVV 251
Query: 268 TSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI 327
             D     ++ +++D     ++I      F   A    + N  E +    ++ L    D 
Sbjct: 252 LPDE----KDYKLLDDAFTRIDIKRNNC-FSLVATEASY-NNGESWLESFLEYLESNIDF 305
Query: 328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
               I E       RKPEG+  + V  + S L G+SD+ E    L ++  V +  G + G
Sbjct: 306 AIKYINENMPKLKVRKPEGTYLLWV--DFSAL-GLSDE-ELESILVQKGKVALNQGNSFG 361
Query: 388 M--KNWLRITFAIEPSALEEGLGRIK 411
           +    + RI  A   S LEE L RIK
Sbjct: 362 IGGSGYQRINLACPRSMLEEALIRIK 387

>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 427

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 146/348 (41%), Gaps = 50/348 (14%)
Query: 82  YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
           YSPS GI   L   + +   L++       P     D+ +T+G +Q +  +  ++  PG 
Sbjct: 76  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 135
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
           N+LL +P +      L+        +      ++P+        W+ + D      +   
Sbjct: 136 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 194
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
               + N  NP GN  T ++ ++I E ARK   ++I D+ Y  L F       ++ M V 
Sbjct: 195 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 254
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
           G  +   +   +    I  G R+G+L    P        +++ +  ++ +S+  P+TF Q
Sbjct: 255 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 302
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
             + Q+     E+ F   VD + D      D I     K +  +     P   MF+ +K 
Sbjct: 303 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 361
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
               ++GI+D  E   + A +  V++LPG A  + +     +LR +F+
Sbjct: 362 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 405

>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 425

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 146/348 (41%), Gaps = 50/348 (14%)
Query: 82  YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
           YSPS GI   L   + +   L++       P     D+ +T+G +Q +  +  ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
           N+LL +P +      L+        +      ++P+        W+ + D      +   
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
               + N  NP GN  T ++ ++I E ARK   ++I D+ Y  L F       ++ M V 
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
           G  +   +   +    I  G R+G+L    P        +++ +  ++ +S+  P+TF Q
Sbjct: 253 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
             + Q+     E+ F   VD + D      D I     K +  +     P   MF+ +K 
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
               ++GI+D  E   + A +  V++LPG A  + +     +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 26/262 (9%)
Query: 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176
           G ++ +  +L  L  P   +LLP+  +P Y   AR   L  R F L+P +  E  L  L+
Sbjct: 95  GSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASL--RTF-LIPLR--EDGLADLK 149
Query: 177 ALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTFGST 232
           A+ +        +++  P NP G V  +   ++    ARK G+ +I D  Y D +  G  
Sbjct: 150 AVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEA 209
Query: 233 PYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS 292
           P   + + G+   V+ L S+SK + + G+RLG+ + S+     + L  ++ +KG ++ + 
Sbjct: 210 P-SPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE-----EALARLERVKGVIDFNQ 263
Query: 293 GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV 352
                  G   +  K  KE        + R+ A    + +K +  +  PR    +M++  
Sbjct: 264 YAGVLRMGV--EALKTPKE-VVRGYARVYRERALGMAEALKGVLSLLPPR---ATMYLWG 317
Query: 353 KLNLSLLEGISDDMEFALQLAK 374
           +L     EG+ DD+EF L+L +
Sbjct: 318 RLP----EGV-DDLEFGLRLVE 334

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/325 (21%), Positives = 137/325 (42%), Gaps = 25/325 (7%)
Query: 92  RRAIADYLNSELPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
           ++AI D+   +    L  +D V +  G K  +  + T +  PG  +LLP PG+  Y A  
Sbjct: 91  KQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGV 150
Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
                +    +L P   +  D   +++   + T  + +  P NP G+  T +   +   K
Sbjct: 151 LLADGKPVPLNLEPPH-YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAK 209
Query: 211 ARKLGIMVISDEVYDHLTFGS-TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269
            +     ++ D  Y    F +  P +     G  V  I + S+SK +   G+R+G+ V +
Sbjct: 210 FKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDV-AIEIYSLSKGYNXSGFRVGFAVGN 268
Query: 270 DPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329
                +Q L+     K   + ++G    +Q A      N  +DF  +  ++ +   D   
Sbjct: 269 --KDXIQALK-----KYQTHTNAGXFGALQDAAIYAL-NHYDDFLEEQSNVFKTRRDRFE 320
Query: 330 DRI--KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
             +   ++P +      +G ++V ++          D  +F   L +E+S++V PG   G
Sbjct: 321 AXLAKADLPFVHA----KGGIYVWLETPPGY-----DSEQFEQFLVQEKSILVAPGKPFG 371
Query: 388 MKN--WLRITFAIEPSALEEGLGRI 410
                ++RI+ A++   L+E   R+
Sbjct: 372 ENGNRYVRISLALDDQKLDEAAIRL 396

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200
           PGF  Y      +  EIR + L    GW++    LEAL   +   + +  P NP G +  
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPE 164
Query: 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260
              LQ IA++ + L I +I DE +       T ++          +  L S++K + +PG
Sbjct: 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFI--PALKDNPHIWVLRSLTKFYAIPG 222
Query: 261 WRLGWLVTSDPSGILQELR 279
            RLG+LV SD + + +  R
Sbjct: 223 LRLGYLVNSDDAAMARMRR 241

>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans Length = 421

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 27/329 (8%)
Query: 93  RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
           +A+ D+   E    +  +D+    G   AI + L   +  G  +L+  P   +Y   AR 
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSP---VYYPFART 159
Query: 153 TRLE----IRHFDLLPEKGWEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKI 207
            RL     + +   +    +E+D + LE  + D N    ++ +P NP G V+    L KI
Sbjct: 160 IRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKI 219
Query: 208 AEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGW 265
           AE  +K G++++SDE++  L  FG+T +    +  S     I L S +K + + G +  +
Sbjct: 220 AELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSF 279
Query: 266 LVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325
            +  + S     LR     +   N      T    A    F+  K  +  ++  ++    
Sbjct: 280 AIIQNES-----LRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKP-WLEELKTVIEGNI 333
Query: 326 DICYDRIKEIPCITCPR--KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383
            +    IKE+   T  +  +PEG+  V +  +   +       + + +L  E  V++  G
Sbjct: 334 KLV---IKELEAKTKIKVMEPEGTYLVWLDFSAYAIA----QPQLSEKLQNEAKVVLNDG 386
Query: 384 MAVGM--KNWLRITFAIEPSALEEGLGRI 410
              G   K + R+  A   + ++E L RI
Sbjct: 387 AHFGKEGKYFARLNVATPKNTVQEALSRI 415

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
           R+ +AD+       +L  +++  TAG  + I+++  VL     N +   P F  Y  NA 
Sbjct: 73  RKEVADFY------QLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
               E+R   LL +   E DL+G     DE T  + I NP NP GN      +Q   ++ 
Sbjct: 127 IEGAEVREIPLLQDG--EHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184
Query: 212 RKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
               ++V+ DE Y +++T    P     +  +   +I   + SK + +   R+G+ +   
Sbjct: 185 PS-DVLVVLDEAYIEYVT--PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK 241
Query: 271 PSGILQELRIV 281
              I+++L IV
Sbjct: 242 E--IIRQLNIV 250

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 43/355 (12%)
Query: 87  GILPARRAIADYLNSELP--CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP 144
           G+   R+AIA ++        +  P+ V +  G   A + I+  LA PG   L+P P +P
Sbjct: 84  GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 145 LYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADENTV-------AMVIVNPGNPCG 196
            +  + R  T +++          +++    ++  A EN          +++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKE-AYENAQKSNIKVKGLILTNPSNPLG 202
Query: 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG--------VFGSTVPVIT 248
                  L+ +     +  I ++ DE+Y    F +  +V +          + +   V  
Sbjct: 203 TTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262
Query: 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKN 308
           + S+SK   +PG+R+G ++ S    ++   R + S   +  +S+    F+   +      
Sbjct: 263 VYSLSKDMGLPGFRVG-IIYSFNDDVVNCARKMSS---FGLVSTQTQYFLAAML------ 312
Query: 309 TKEDFFSKIVDILRDTADICYDRIK------EIPCITCPRKPEGSMFVMVKLNLSLLEGI 362
           + E F   + + LR++A     R K      E+  I C +   G +F  + L   L E  
Sbjct: 313 SDEKF---VDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAG-LFCWMDLRPLLREST 368
Query: 363 SD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFA-IEPSALEEGLGRIKAF 413
            D +M     +  +  + V PG +   +   W R+ FA ++   ++  L RI+ F
Sbjct: 369 FDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF 423

>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium Diphtheriae At 1.99 A Resolution Length = 377

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/343 (20%), Positives = 133/343 (38%), Gaps = 29/343 (8%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
           Y P   +L   +A A++       +  P+ ++      + + + +       + +++P P
Sbjct: 56  YQPDGSLL--SQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTP 113
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
            +P +      T+ E     +  +    ++L  +E        ++++ NP NP G VF  
Sbjct: 114 AYPPFFHLLSATQRE----GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXVFAP 169
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV-ITLGSMSKRWIVPG 260
           + L ++ + A +    V+ DE++  L F     V  GV  +   V IT+ + S  W + G
Sbjct: 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWNIAG 229
Query: 261 WRLGWLVTSDPSGILQELRIVDSIK---GYLNISSGPATFVQGAVPQIFKNTKEDFFSKI 317
            +   ++ S+PS      ++   IK     L + +  A +  G           DF ++ 
Sbjct: 230 LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGT----------DFLNQE 279
Query: 318 VDILRDTADICYDRI-KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376
           V  L++  D     I K IP        + +    +    + +EG     EF ++ AK  
Sbjct: 280 VAYLKNNHDFLLHEIPKRIPGAKI-TPXQATYLXWIDFRDTTIEG--SPSEFFIEKAK-- 334
Query: 377 SVIVLPGMAVGMK--NWLRITFAIEPSALEEGLGRIKAFCQRH 417
            V    G   G     + R+ FA     LEE + R       H
Sbjct: 335 -VAXNDGAWFGEDGTGFCRLNFATSREVLEEAIDRXAKAVSHH 376

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 20/201 (9%)
Query: 79  FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
           +  Y    G  P R AIA      L   +  DDV+++ G K  I   L V+      I +
Sbjct: 91  YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAV 147
Query: 139 PKPGFPLY--------EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAM 186
             P +P Y        +    +T ++    I +    PE G+  DL  +       T  +
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246
              +P NP G   T +QL ++ E A+K G +++ D  Y        P     + G+    
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 247 ITLGSMSKRWIVPGWRLGWLV 267
           +   S SK     G RLGW V
Sbjct: 263 METASFSKYAGFTGVRLGWTV 283

>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola Contains A Pyridoxal 5'-Phosphate Cofactor Length = 399

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP-GFPLYEANA 150
           ++ +  ++       +  D +  TAG   A+   +    +PG  +++  P  +P + A  
Sbjct: 72  KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK 131
Query: 151 RHTRLEIRHFDLLPEKGW-EVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTYQQLQKIA 208
              R +I   +LL + G+  +D   LE L+ D+N  A++  +P NP G V+   +LQKI 
Sbjct: 132 NQER-KIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIK 190
Query: 209 EKARKLGIMVISDEV--------YDHLTFGS 231
           +   K  +M+ SDE+        Y+H  F S
Sbjct: 191 DIVLKSDLMLWSDEIHFDLIMPGYEHTVFQS 221

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 79/201 (39%), Gaps = 20/201 (9%)
Query: 79  FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
           +  Y    G  P R AIA      L   +  DDV+++ G K  I   L V+      I +
Sbjct: 91  YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAV 147
Query: 139 PKPGFPLY--------EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAM 186
             P +P Y        +    +T ++    I +    PE G+  DL  +       T  +
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246
              +P NP G   T +QL ++ E A+K G +++ D  Y        P     + G+    
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 247 ITLGSMSKRWIVPGWRLGWLV 267
           +   S S+     G RLGW V
Sbjct: 263 METASFSQYAGFTGVRLGWTV 283

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/329 (20%), Positives = 137/329 (41%), Gaps = 53/329 (16%)
Query: 78  EFDCYSPSVGILPARRAIADYLNSELPCKL--SPDDVYLTAGCKQAIQVILTVLARPGAN 135
           E + Y  + G+   R+A A++L          + +++    G ++A+   +  +  P ++
Sbjct: 58  ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSD 117
Query: 136 -----ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190
                I+ P P + +YE        EI HF   P   +  D   +     + T  + + +
Sbjct: 118 GIKPAIVSPNPFYQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCS 176
Query: 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF-GSTPY------VRMGVFGST 243
           P NP G+V      +++ +   K G ++ SDE Y  + F G+ P        ++G   S 
Sbjct: 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLG--RSR 234
Query: 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV- 302
             ++   S+S R  VPG R G++     + +L+   +  +  G     S  +  VQ A  
Sbjct: 235 QKLLXFTSLSXRSNVPGLRSGFVAGD--AELLKNFLLYRTYHG-----SAXSIPVQRASI 287
Query: 303 ------PQIFKNTK--EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKL 354
                   +  N +  ++ F +++ IL+   D+              + P+ S ++ +K+
Sbjct: 288 AAWDDEQHVIDNRRLYQEKFERVIPILQQVFDV--------------KLPDASFYIWLKV 333
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPG 383
                    DD+ FA  L ++ ++ VLPG
Sbjct: 334 P------DGDDLAFARNLWQKAAIQVLPG 356

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 20/201 (9%)
Query: 79  FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
           +  Y    G  P R AIA      L   +  DDV+++ G K  I   L V+      I +
Sbjct: 91  YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAV 147
Query: 139 PKPGFPLY--------EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAM 186
             P +P Y        +    +T ++    I +    PE G+  DL  +       T  +
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246
              +P NP G   T +QL ++ E A+K G +++ D  Y        P     + G+    
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 247 ITLGSMSKRWIVPGWRLGWLV 267
           +   S S      G RLGW V
Sbjct: 263 METASFSNYAGFTGVRLGWTV 283

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 77/201 (38%), Gaps = 20/201 (9%)
Query: 79  FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
           +  Y    G  P R AIA      L   +  DDV+++ G K  I   L V       I +
Sbjct: 91  YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDISR-LQVXFGSNVTIAV 147
Query: 139 PKPGFPLY--------EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAM 186
             P +P Y        +    +T ++    I +    PE G+  DL  +       T  +
Sbjct: 148 QDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPDLSTVG-----RTDII 202
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246
              +P NP G   T +QL ++ E A+K G +++ D  Y        P     + G+    
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVA 262
Query: 247 ITLGSMSKRWIVPGWRLGWLV 267
               S SK     G RLGW V
Sbjct: 263 XETASFSKYAGFTGVRLGWTV 283

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/345 (19%), Positives = 133/345 (38%), Gaps = 51/345 (14%)
Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAI----QVILTVLARPGANILLPKPGFPLYE 147
           R A   +       +L  +++  T G ++ +      +L     P   I  P P + +YE
Sbjct: 65  RAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNP--TIAYPNPFYQIYE 122
Query: 148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN-PGNPCGNVFTYQQLQK 206
             A+  + +     L  E  +   L+  E       V +VI+N P NP G   + ++L  
Sbjct: 123 GAAKFIKAKSLLXPLTKENDFTPSLNEKEL----QEVDLVILNSPNNPTGRTLSLEELIS 178
Query: 207 IAEKARKLGIMVISDEVYDHLTFGSTP-----YVRMGVFGSTVPVITLGSMSKRWIVPGW 261
             + A K   ++I+DE Y  +   + P        +    +   V+ + S+SKR   PG 
Sbjct: 179 WVKLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGL 238
Query: 262 RLGWLVTSDPSGILQELRIVDSIKGYLNIS----SGPATFVQGAVPQIFKNTKEDFFSKI 317
           R G++     S +L++ +   +  GY + +    +  A ++     + F+N   +     
Sbjct: 239 RSGFIAGD--SRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLA 296
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
             I ++T    Y     +P                         + +   FA  L + E 
Sbjct: 297 RKIFKNTLIYPYSFYVYLP-------------------------VQNGENFAKTLYQNEG 331
Query: 378 VIVLPGMAVGMK----NWLRITFAIEPSALEEGLGRIKAFCQRHA 418
           +I LP + +G      +++R+    +   LE+ L  I+ + + HA
Sbjct: 332 IITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENHA 376

>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent Aminotransferase (Lbul_1103) From Lactobacillus Delbrueckii Subsp. At 1.61 A Resolution Length = 391

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 93  RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
           +A+AD+   E   +   D     +G   AI   +     PG  IL+ +P +  + +    
Sbjct: 69  KAVADWEEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEG 128
Query: 153 TRLEIRHFDLLPEKG-WEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
               +   DL+ E   + V+   LE  LA  +    V  NP NP G  ++ +++++IAE 
Sbjct: 129 NGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAEL 188
Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258
             K  +++ISDE++  L                 P  T+   +K W+V
Sbjct: 189 CAKHQVLLISDEIHGDLVLTDE---------DITPAFTVDWDAKNWVV 227

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 107 LSPDDVYLTAGCKQAIQVILTVLARPGAN-ILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
           + P+ V ++ G  + I++++     PG + IL   P + +Y  +A    +E R    L  
Sbjct: 73  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL-- 130
Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
             W++DL G+    D   V  V  +P NP G +   Q  + + E  R   I V++DE Y 
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYV-CSPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYI 188
Query: 226 HLTFGSTPYVRMGVFGSTVPVIT-LGSMSKRWIVPGWRLGWLVTSD 270
                  P   +  + +  P +  L ++SK + + G R G+ + ++
Sbjct: 189 EF----CPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230

>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A Modulator In Mal Gene Expression Length = 390

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 142/336 (42%), Gaps = 39/336 (11%)
Query: 94  AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHT 153
           AIA + +++    +    V         +  ++   +  G  +++  P +     +A + 
Sbjct: 72  AIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAY-----DAFYK 126
Query: 154 RLEIRHFDLLP---EK---GWEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQK 206
            +E     ++P   EK   GW  D+  LEA LA      M++ +P NP G V+T  +L+ 
Sbjct: 127 AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI 186
Query: 207 IAEKARKLGIMVISDEVYDHLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265
           +A+   + G+ VISDE++  + +G  P++    V      ++T G  SK + +P     +
Sbjct: 187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSG--SKSFNIPALTGAY 244
Query: 266 LVTSDPS---GILQELRIVDSIK--GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320
            +  + S     L  L+  D +     L +++  A + QGA           +   +   
Sbjct: 245 GIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGA----------PWLDALRIY 294
Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLN-LSLLEGISDDMEFALQLAKEESVI 379
           L+D      D++         + P+ +    + L  L++     DD      L ++E V 
Sbjct: 295 LKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNI-----DDNALQKALIEQEKVA 349
Query: 380 VLPGMAVGM--KNWLRITFAIEPSALEEGL-GRIKA 412
           ++PG   G   + ++R+      S LE+G+ G I A
Sbjct: 350 IMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINA 385

>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase (Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15 A Resolution Length = 407

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 17/231 (7%)
Query: 44  RPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSEL 103
           RP+    HGD  A      TP          +S     Y+   G L  R  +A  L +  
Sbjct: 40  RPV-DFSHGDVDAH---EPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFT 95
Query: 104 PCKL-SPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-------PLYEANARHTRL 155
              + + D + +T G + A+ + +      G  + + +P +         +E      +L
Sbjct: 96  GAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEXVPVQL 155
Query: 156 EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215
           +    D   E    +DL GLE          +  NP NP G V++ +++ +IA  A + G
Sbjct: 156 DYVSAD---ETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYG 212
Query: 216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLG 264
             VI+D++Y  L +    Y  +    +     V+T+   S    + G+RLG
Sbjct: 213 ATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 107 LSPDDVYLTAGCKQAIQVILTVLARPGAN-ILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
           + P+ V ++ G  + I++++     PG + IL   P +  Y  +A    +E R    L  
Sbjct: 73  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIGVECRTVPTL-- 130
Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
             W++DL G+    D   V  V  +P NP G +   Q  + + E  R   I V++DE Y 
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYV-CSPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYI 188
Query: 226 HLTFGSTPYVRMGVFGSTVPVIT-LGSMSKRWIVPGWRLGWLVTSD 270
                  P   +  + +  P +  L ++SK + + G R G+ + ++
Sbjct: 189 EF----CPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230

>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase (Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A Resolution Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170
           +V L  G  + I  +    ARPGA +  P PGF  Y  +A+   LE   F  +P +  + 
Sbjct: 87  EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLE---FVGVPLRA-DF 142
Query: 171 DLD---GLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYD 225
            LD    L A A+     + +  P NP GN+F     + I   A+      +V+ DE Y 
Sbjct: 143 TLDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQ 202
Query: 226 HLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI 284
              F    +  R+  FG+ +   T+  +     + G RLG+ V  DP    Q L  +D +
Sbjct: 203 --PFAQESWXSRLTDFGNLLVXRTVSKLG----LAGIRLGY-VAGDP----QWLEQLDKV 251
Query: 285 KGYLNIS 291
           +   N++
Sbjct: 252 RPPYNVN 258

>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta (Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A Resolution Length = 417

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 170/419 (40%), Gaps = 62/419 (14%)
Query: 25  LTVRSALTIIKQNLKENDPRP-IIPLGHGDPSAFPC----FRTTPXXXXXXXXXXRSAEF 79
            T  S +T + ++L +    P  I LG G+P+  P     F+T            ++A+ 
Sbjct: 11  FTRHSGITRLXEDLNDGLRTPGAIXLGGGNPAHIPAXQDYFQT---LLTDXVESGKAADA 67
Query: 80  DC-YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
            C Y    G      A+A  L   L   + P ++ LT G + A   +  + A   A+   
Sbjct: 68  LCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGST 127
Query: 139 PKPGFPL------YEANARHTRLEIR---HFDLLPEKGWEVDLDGLEALADENTVAMVIV 189
            K  FPL      Y  +     L +    + +LLPE  ++  +D       E T  + + 
Sbjct: 128 KKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGXICVS 187
Query: 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP---- 245
            P NP GNV T ++L K+   A +  I ++ D  Y        P+  + +F    P    
Sbjct: 188 RPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAY------GVPFPGI-IFSEARPLWNP 240
Query: 246 -VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS---SGPATFVQ-- 299
            +I   S+SK  + PG R G ++ +D     + +  + +  G ++++    GPA   +  
Sbjct: 241 NIILCXSLSKLGL-PGSRCGIIIAND-----KTITAIANXNGIISLAPGGXGPAXXCEXI 294
Query: 300 --GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357
               + ++ +   + F+ + V   + T  I    + E  C+    KPEG++F+ +     
Sbjct: 295 KRNDLLRLSETVIKPFYYQRV---QQTIAIIRRYLSEERCLI--HKPEGAIFLWL----- 344
Query: 358 LLEGISDDMEFALQLAKEESVIVLPGMAV--GM-KNW------LRITFAIEPSALEEGL 407
             + +    E   Q  K   V+ +PG     G+ K W       R  +  EP  +E G+
Sbjct: 345 WFKDLPITTELLYQRLKARGVLXVPGHYFFPGLDKPWPHTHQCXRXNYVPEPDKIEAGV 403

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 76  SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135
           + E + Y P    +  R  +A Y+  +    ++ D+++   G  + +Q +L     PG  
Sbjct: 57  ATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 115
Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKG--WEVDLD-GLEALADENTVAMVIVNPG 192
            L  +P + ++   A+ T  E     +   +G  + +D+D  LE +  +    + +  P 
Sbjct: 116 ALGFQPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPN 171
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
           NP G+V +   +++I   A  +   VI DE Y    F  +P     +      ++   +M
Sbjct: 172 NPTGDVTSLDDVERIINVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTM 226
Query: 253 SKRWIVPGWRLGWLVTS 269
           SK +   G RLG+ V +
Sbjct: 227 SKAFDFAGGRLGYFVAN 243

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 76  SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135
           + E + Y P    +  R  +A Y+  +    ++ D+++   G  + +Q +L     PG  
Sbjct: 60  ATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 118
Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKG--WEVDLD-GLEALADENTVAMVIVNPG 192
            L  +P + ++   A+ T  E     +   +G  + +D+D  LE +  +    + +  P 
Sbjct: 119 ALGFQPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPN 174
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
           NP G+V +   +++I   A  +   VI DE Y    F  +P     +      ++   +M
Sbjct: 175 NPTGDVTSLDDVERIINVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTM 229
Query: 253 SKRWIVPGWRLGWLVTS 269
           SK +   G RLG+ V +
Sbjct: 230 SKAFDFAGGRLGYFVAN 246

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 23/206 (11%)
Query: 82  YSPSVGILPARRAIA-DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140
           Y P  G+   R+ ++ D+    +  K    +++++ G K  +  +L+    P   + +  
Sbjct: 71  YGPDFGLPALRQKLSEDFYRGFVDAK----EIFISDGAKVDLFRLLSFFG-PNQTVAIQD 125
Query: 141 PGFPLYEANARHTRL-EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
           P +P Y   AR T   EI     L E  +  +        D +   + + +P NP G V 
Sbjct: 126 PSYPAYLDIARLTGAKEIIALPCLQENAFFPEFP-----EDTHIDILCLCSPNNPTGTVL 180
Query: 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF---GSTVPVITLGSMSKRW 256
              QL+ I   A +  I+++ D  Y   TF S P +   +F    +    I + S SK  
Sbjct: 181 NKDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPL 238
Query: 257 IVPGWRLGWLVTSDPSGILQELRIVD 282
              G RLGW V      I QEL   D
Sbjct: 239 GFAGIRLGWTV------IPQELTYAD 258

>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C. 2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus Ncfm At 2.15 A Resolution Length = 533

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 28/209 (13%)
Query: 95  IADYLNSELPCK----LSPDDVYLTAGCKQAIQVILTVLA-----RPGANILLPKPGFPL 145
           I +Y   EL  K        D++ T G   AI      LA     + G  I + +P F  
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 146 YEANARHTRLEIRHFDL--LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203
           Y         E+   DL    +  WE++ + +E L D +  A+++VNP NP    F    
Sbjct: 206 YLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNA 265
Query: 204 LQKIAEKARKL-GIMVISDEVYDHLT------FGSTPYVRMGVFGSTVPVITLGSMSKRW 256
           L  I +   K   + +ISDEVY          +   PY    V+          S S  +
Sbjct: 266 LNAIKQAVEKNPKLXIISDEVYGAFVPNFKSIYSVVPYNTXLVY----------SYSXLF 315
Query: 257 IVPGWRLGWLVTSDPSGILQELRIVDSIK 285
              GWRLG +  ++ +     +  +D ++
Sbjct: 316 GCTGWRLGVIALNEKNVFDDNIAHLDKVE 344

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
Query: 76  SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135
           + E + Y P    +  R  +A Y+  +    ++ D+++   G  + +Q +L     PG  
Sbjct: 60  ATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 118
Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKG--WEVDLD-GLEALADENTVAMVIVNPG 192
            L  +P + ++   A+ T  E     +   +G  + +D+D  LE +  +    + +  P 
Sbjct: 119 ALGFQPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPN 174
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
           NP G+V +   +++I   A  +   VI DE Y    F  +P     +      ++   +M
Sbjct: 175 NPTGDVTSLDDVERIINVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTM 229
Query: 253 SKRWIVPGWRLGWLVTS 269
           S  +   G RLG+ V +
Sbjct: 230 SXAFDFAGGRLGYFVAN 246

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 86/187 (45%), Gaps = 14/187 (7%)
Query: 84  PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF 143
           P V      ++I +YL      KL    + L  G  + I++ +++  +    IL+  P +
Sbjct: 59  PDVNYRRLNKSIENYL------KLKDIGIVLGNGASEIIELSISLFEK----ILIIVPSY 108
Query: 144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203
             YE NA+   + +  F  L E    +D + + +  D+   +++I NP NP G +   ++
Sbjct: 109 AEYEINAKKHGVSVV-FSYLDENMC-IDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEK 165
Query: 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263
              + + A +    +I DE +   T G      +G   +   +  + +M+K + +PG R 
Sbjct: 166 FIHVLKLAEEKKKTIIIDEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRF 224
Query: 264 GWLVTSD 270
           G+ +T++
Sbjct: 225 GYGITNN 231

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 32/255 (12%)
Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----- 146
           R+AIA+    +L  K   ++V+++ G +  I   L +L      I +  P FP Y     
Sbjct: 118 RKAIAETFYRDLHVK--SNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAYIDSSV 174
Query: 147 ---EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
              +    H + +    + +    P   +  DL    A+     V +   +P NP G V 
Sbjct: 175 IIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDL----AMTPRTDV-IFFCSPNNPTGYVA 229
Query: 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259
           + +QL ++ + A+  G ++I D  Y       +P     + G+    I + S SK     
Sbjct: 230 SRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFT 289
Query: 260 GWRLGW------LVTSDPSGILQELR--IVDSIKGYLNI--SSGPATFVQGAVPQIFKNT 309
           G RLGW      L+ S+   I+ +    +  S  G  NI  + G A    G + +I   +
Sbjct: 290 GVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACLSSGGLKEI--RS 347
Query: 310 KEDFFSKIVDILRDT 324
             +++ +   IL DT
Sbjct: 348 VNNYYKENRKILMDT 362

>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant Staphylococcus Aureus Sar2028, An Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate Dependent Aminotransferase Length = 430

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 27/274 (9%)
Query: 82  YSPSVGILPARRAIADYLNSELPCKLSPDDV---YLTAGCKQAIQVILTVLARPGANILL 138
           Y+P  GI   R      +  + P +LS D++    +T      + ++  +       ILL
Sbjct: 84  YAPPQGIEELRDLWQQKMLRDNP-ELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILL 142
Query: 139 PKPGFPLYEA--NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENT--VAMVIVNPGNP 194
           P+  +  Y+   N R+    ++ + +  + G       +EAL   N   V M++  P NP
Sbjct: 143 PEHNWGNYKLVFNTRNGA-NLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNP 201
Query: 195 CGNVFTYQQLQKIAEKARKLG-----IMVISDEVYDHLTFGSTPYVR------MGVFGST 243
            G   T++++  I E  + L      ++ + D+ Y  L F    Y +        +  + 
Sbjct: 202 TGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGL-FYEDVYTQSLFTALTNLHSNA 260
Query: 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGA 301
           +  I L   +K +   G+R+G++         +E+ +   +KG +  NISSGP    Q A
Sbjct: 261 ILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEV-LEAKVKGLIRSNISSGPLP-TQSA 318
Query: 302 VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335
           V  + KN K+  F K ++    T    Y+  KE+
Sbjct: 319 VKHVLKNNKQ--FDKEIEQNIQTLKERYEVTKEV 350

>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase (Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50 A Resolution Length = 444

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 27/158 (17%)
Query: 94  AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN--------------ILLP 139
           A+  + N      L+ +++ LT G + A   +  +      N              ILLP
Sbjct: 91  ALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLP 150
Query: 140 KP----GFPLYEANARHTRLEIRHFDLLPEKG------WEVDLDGLE---ALADENTVAM 186
                 G+       +H    + H D +   G      + VD + LE   AL +    A+
Sbjct: 151 LTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAI 210
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
               P NP GNV T ++   +AE A++  I +I D  Y
Sbjct: 211 CCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248

>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase (Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75 A Resolution Length = 437

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 60/165 (36%), Gaps = 10/165 (6%)
Query: 115 TAGCKQAIQVILTVLARPGAN----ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170
           T G  Q   V   V  R   N     L   PGF L +   R    +   FDL   +G ++
Sbjct: 111 TVGSXQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKL 170
Query: 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG 230
                  L      +++  NP NP     T ++L+ I E A K  ++VI D  Y    F 
Sbjct: 171 REKLESYLQTGQFCSIIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAYFGXDFR 230
Query: 231 ------STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269
                   P  +  V   T   I   S S  +   G R+G L  S
Sbjct: 231 KDYSHPGEPLYQPSVANYTDNYILALSSSXAFSYAGQRIGVLXIS 275

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	421
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	1e-176
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	1e-167
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	3e-77
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	1e-73
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	6e-68
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	2e-67
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	4e-61
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	5e-61
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	7e-59
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	6e-58
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	2e-57
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	6e-57
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	8e-57
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	1e-55
3ele_A	398	Amino transferase; RER070207001803, structural gen	4e-55
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	5e-55
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	1e-54
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	4e-54
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	2e-53
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	3e-53
3nra_A	407	Aspartate aminotransferase; structural genomics, j	6e-53
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	5e-52
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	5e-52
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	5e-52
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	6e-52
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	2e-50
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	2e-50
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	4e-49
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	1e-48
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	5e-46
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	9e-46
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	5e-45
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	1e-44
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	3e-44
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	2e-43
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	4e-43
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	2e-40
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	3e-40
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	1e-39
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	2e-39
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	4e-39
1vp4_A	425	Aminotransferase, putative; structural genomics, j	9e-39
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	4e-38
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	2e-35
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	3e-34
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	4e-33
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	7e-31
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	1e-30
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	2e-26
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	1e-25
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	8e-24
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	1e-23
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	1e-23
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	2e-23
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	2e-23
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	2e-23
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	9e-23
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	9e-23
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	1e-22
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	2e-22
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	2e-22
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	4e-21
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	4e-21
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	5e-21
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	1e-18
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	2e-17
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	6e-17
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	6e-16
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	6e-08
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	7e-06
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	5e-05
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	5e-05
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	4e-04
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	5e-04
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	7e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  497 bits (1282), Expect = e-176
 Identities = 140/383 (36%), Positives = 214/383 (55%), Gaps = 3/383 (0%)

Query: 37  NLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96
            +K N  + +I L  GDP+ F    T P    A+ DA+ S +++ Y+PS+G L +R  IA
Sbjct: 47  KVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIA 106

Query: 97  DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
            Y +      L   DV LT+GC QAI + L VLA PG NIL+P+PGF LY+  A    +E
Sbjct: 107 SYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIE 165

Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           ++ ++LLPEK WE+DL  LE L DE T  +++ NP NPCG+VF+ + LQKI   A +  +
Sbjct: 166 VKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCV 225

Query: 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276
            +++DE+Y  + F    Y  +    + VP+++ G ++KRW+VPGWRLGW++  D   I  
Sbjct: 226 PILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG 285

Query: 277 ELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336
              I D +        GP T VQGA+  I   T  +F+   +  L+  AD+CY  +  IP
Sbjct: 286 N-EIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIP 344

Query: 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF 396
            +    +P G+M++MV + +       +D+EF  +L  E+SV  LP       N++R+  
Sbjct: 345 GLRPV-RPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI 403

Query: 397 AIEPSALEEGLGRIKAFCQRHAK 419
            +    + E   RI+ FC++H  
Sbjct: 404 TVPEVMMLEACSRIQEFCEQHYH 426

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  474 bits (1222), Expect = e-167
 Identities = 126/390 (32%), Positives = 200/390 (51%), Gaps = 13/390 (3%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
              P+PII L  GDP+      T+      + +A+ S E + Y P+VG   AR A+A + 
Sbjct: 29  SPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWW 88

Query: 100 NS------ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHT 153
            +      EL   +  D+V L +G    I + +T +   G   L+P+PGFP YE   +  
Sbjct: 89  RNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAY 148

Query: 154 RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213
            + +  ++  PE  WE DLD +  L D+ T  +++ NP NPCG+ F+ + ++ I   A +
Sbjct: 149 GIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEE 208

Query: 214 LGIMVISDEVYDHLTFG----STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269
           L + + SDE+Y  + F     +  +  +  F +TVP + LG  +K  +VPGWRLGWL+  
Sbjct: 209 LRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYV 268

Query: 270 DPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329
           DP G       ++ +K    +  GP T VQ A+ +   NT ++   +IV  + ++A   Y
Sbjct: 269 DPHGNGPS--FLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLY 326

Query: 330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK 389
           + I E   +     P G+M++M +++L     I  D+EF  +L +EE+V VLPG      
Sbjct: 327 NHIGECIGLAPT-MPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAP 385

Query: 390 NWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
            + R+T         E + RIKAFCQRHA 
Sbjct: 386 GFTRLTTTRPVEVYREAVERIKAFCQRHAA 415

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  244 bits (626), Expect = 3e-77
 Identities = 107/383 (27%), Positives = 177/383 (46%), Gaps = 12/383 (3%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           E     +I L  GDP  F  F+      +A   A++    + Y  S G+   R+AI +  
Sbjct: 34  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVERE 91

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH 159
             +    ++PDDV +TA   +A+Q+I   L  PG  IL+P P +P Y    +    +   
Sbjct: 92  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 151

Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
           +  + E+ W+ D+D +     + T A+ ++NP NP G ++  + L++I   A +  I VI
Sbjct: 152 YRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 211

Query: 220 SDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
           SDE+YD +T+    ++  G     VPVI +  +SK +   GWRLG++   DP   L E  
Sbjct: 212 SDEIYDLMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE-- 268

Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339
           + ++I     I   P T  Q A          D+  + +  L++  D  Y R+ EIP I+
Sbjct: 269 VREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGIS 327

Query: 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK--NWLRITFA 397
              KP+G+ ++  K+    +    +D EF L +     V+ + G   G       R  F 
Sbjct: 328 TT-KPQGAFYIFPKIE---VGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 383

Query: 398 IEPSALEEGLGRIKAFCQRHAKQ 420
                LEE + R + F +   K+
Sbjct: 384 PPIEILEEAMDRFEKFMKERLKE 406

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  233 bits (598), Expect = 1e-73
 Identities = 80/389 (20%), Positives = 152/389 (39%), Gaps = 42/389 (10%)

Query: 37  NLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96
           ++       I  L   +      F  +    +     ++  + + Y    G    +++++
Sbjct: 23  DIAGVS---ISSLTLEEL-----FALSGTNPEDFYKKLQGTKLN-YGWIEGSPAFKKSVS 73

Query: 97  DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
                     + P+ +  T G   A  ++L  L  PG +++   P +       +    E
Sbjct: 74  QLYTG-----VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAE 128

Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           +  + +  E GW  DL+ L  L    T  + I N  NP G V     L+++ E A ++G 
Sbjct: 129 VDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGA 188

Query: 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSDP 271
            ++SDEVY   +    P         ++       I + S+SK + +PG R+GW+     
Sbjct: 189 YILSDEVYRSFSELDVP---------SIIEVYDKGIAVNSLSKTYSLPGIRIGWVAA--N 237

Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331
             +   LR     + Y  I      F          +  ++   +   IL +   I    
Sbjct: 238 HQVTDILR---DYRDYTMIC--AGVFDDLVAQLALAH-YQEILERNRHILEENLAILDQW 291

Query: 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW 391
           I+E P ++   +P       VK+ + +        +F LQL +E  V+++PG       +
Sbjct: 292 IEEEPLVSYI-RPAVVSTSFVKIAVDM-----PMEDFCLQLLQEHGVLLVPGNRFERDGY 345

Query: 392 LRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           +R+ FA E   L +GL ++  F +R  K+
Sbjct: 346 VRLGFACEQETLIKGLEKLSQFLRRFDKE 374

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score =  223 bits (569), Expect = 6e-68
 Identities = 82/399 (20%), Positives = 162/399 (40%), Gaps = 32/399 (8%)

Query: 53  DPSAFPCFRT-TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD 111
                  F   +   A  ++  +       YS S GI   R AIA  + S      + DD
Sbjct: 100 REEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADD 159

Query: 112 VYLTAGCKQAIQVILTVLAR-PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170
           ++LT G    + +++ +L R     IL+P P +PLY A+       +  + L    GW +
Sbjct: 160 IFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGL 219

Query: 171 DLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
           +   ++   ++      N  A+V++NPGNP G V   +    I +  +  G+++++DEVY
Sbjct: 220 ETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVY 279

Query: 225 DHLTF-GSTPYV-------RMGVFGSTVPVITLGSMSKRWI-VPGWRLGWL-VTSDPSGI 274
               +  +  +         +G     +P+++  S+SK +    G R G+  +T   + +
Sbjct: 280 QENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPV 339

Query: 275 LQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFS---KIVDILRDTADICYDR 331
            +++  + S+    NI+      +    P+    +   + +    I+  L   A      
Sbjct: 340 REQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHA 399

Query: 332 IKEIPCITCPRKPEGSMFVMVKLNLSL-------LEGISDDMEFALQLAKEESVIVLPGM 384
             ++  ITC  + EG+M+V  ++ L             + D  +AL+L +   ++V+PG 
Sbjct: 400 FNKLEGITCN-EAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGS 458

Query: 385 AVGMKNW---LRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
             G        R T   +   +   + R   F +    +
Sbjct: 459 GFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSE 497

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score =  221 bits (564), Expect = 2e-67
 Identities = 89/455 (19%), Positives = 166/455 (36%), Gaps = 76/455 (16%)

Query: 34  IKQNLKENDPRP---IIPLGHGDPSAF-----------------PCFRTTPVAADAVVDA 73
           I+  L+    +P   +I    GD  A                  P    +P   +     
Sbjct: 50  IELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKR 109

Query: 74  VRSAEFDC-------YSPSVGILPARRAIADYLNS---ELPCKLSPDDVYLTAGCKQAIQ 123
            R     C       YS S G+   R  +A Y+      +P    PD++YLT G    I 
Sbjct: 110 ARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPA--DPDNIYLTTGASDGIS 167

Query: 124 VILTVLARPG----ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179
            IL +L   G      +++P P +PLY A          ++ L  E  W ++++ L    
Sbjct: 168 TILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAV 227

Query: 180 DENTV-----AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF-GSTP 233
            E         + I+NPGNP G V + + ++ +   A +  + +++DEVY    +     
Sbjct: 228 QEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCR 287

Query: 234 YVRM--------GVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSI 284
           +             + S V + +  S SK ++   G+R G++   +         I   +
Sbjct: 288 FHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHP-----EIKGQL 342

Query: 285 KGYLNISSGPATFVQGAVPQIFKNTKE---------DFFSKIVDILRDTADICYDRIKEI 335
              L++   P    Q A+  +                    ++  L   A +  D   ++
Sbjct: 343 VKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQV 402

Query: 336 PCITCPRKPEGSMFVMVKLNLSLL-------EGISDDMEFALQLAKEESVIVLPGMAVGM 388
           P I C    +G+M+   ++ +            ++ DM + ++L +E  + V+PG   G 
Sbjct: 403 PGIHCN-PLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ 461

Query: 389 KNW---LRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
           +      R+T       L+  L ++K F     ++
Sbjct: 462 REGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEK 496

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  201 bits (515), Expect = 4e-61
 Identities = 83/379 (21%), Positives = 149/379 (39%), Gaps = 28/379 (7%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
           R II +  G P           A +A+  ++ +     Y+ ++G+   R+ IA       
Sbjct: 31  RRIIHMEVGQPG----TGAPRGAVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWY 85

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163
              L P  V +T G      +  T L   G  + +  PG+P Y    R   L        
Sbjct: 86  GVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTA 145

Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223
           PE   +        L   +   +++ +P NP G +  +  +  + E A+  G   ISDE+
Sbjct: 146 PENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEI 202

Query: 224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
           Y  + + +     + +         + S SK + + GWR+GW+V   P      +R+V+ 
Sbjct: 203 YHGIEYEAKAVTALELTDEC---YVINSFSKYFSMTGWRVGWMVV--PEDQ---VRVVER 254

Query: 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343
           I   + I        Q A         E      +D+ +    +  +R+ +         
Sbjct: 255 IAQNMFIC--APHASQVAALAALDCDAE--LQANLDVYKANRKLMLERLPKAGFTRIA-P 309

Query: 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEP 400
           P+G+ +V    ++S L    D   FA ++ ++  V V PG+          LR ++A   
Sbjct: 310 PDGAFYVYA--DVSDL--TDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARAT 365

Query: 401 SALEEGLGRIKAFCQRHAK 419
           + +EEGL R++AF Q   +
Sbjct: 366 ADIEEGLDRLEAFMQARGE 384

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  203 bits (518), Expect = 5e-61
 Identities = 64/411 (15%), Positives = 121/411 (29%), Gaps = 40/411 (9%)

Query: 36  QNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI 95
            NL++        +  G P          +  +  +  +R      Y    G+   ++  
Sbjct: 36  TNLEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEA 91

Query: 96  ADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----PGANILLPKPGFPLYEANAR 151
           + +    +   +       T G  Q   V   V  R         L   PGF L +   R
Sbjct: 92  SRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCR 151

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
               +   FDL   +G ++       L      +++  NP NP     T ++L+ I E A
Sbjct: 152 ILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELA 211

Query: 212 RKLGIMVISDEVYDHLTF-GSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGW 265
            K  ++VI D  Y  + F     +    ++  +V       I   S SK +   G R+G 
Sbjct: 212 TKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGV 271

Query: 266 LVTSDP------SGILQELRIVDSIKGYL-----NISSGPATFVQGAVPQIFKNTKED-- 312
           L+ S          + +    +   +         +SSG     Q  +  + K   +   
Sbjct: 272 LMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEY 331

Query: 313 FFSKIVDILRDTADICYDRIKE-----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDME 367
            F   V      A I      +     +       +P    F       ++     D  +
Sbjct: 332 NFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGN-EPLADGFYF-----TVGYKGMDSSK 385

Query: 368 FALQLAKEESVIVLPGMAVGMK--NWLRITFAIEPSALEEGLGRIKAFCQR 416
              +  +     +        +       T  +  S   +   R++     
Sbjct: 386 LIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  197 bits (504), Expect = 7e-59
 Identities = 88/421 (20%), Positives = 152/421 (36%), Gaps = 49/421 (11%)

Query: 26  TVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS 85
           ++ +       N  +N  R +I LG G    F  +     A      A+     + YSP+
Sbjct: 39  SLTNEAAAKAANNSKNQGRELINLGQG----FFSYSPPQFAIKEAQKALDIPMVNQYSPT 94

Query: 86  VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL 145
            G      ++    +     +L  ++V +T G  + I   L  L   G  +++ +P F  
Sbjct: 95  RGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQ 154

Query: 146 YEAN-------ARHTRLE---IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195
           Y  N         +  +             + W +D +  E      T A++I  P NP 
Sbjct: 155 YIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPI 214

Query: 196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLG 250
           G VFT ++L  +     K  +++ISDEVY+HL F  +         +  P      +T+G
Sbjct: 215 GKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIA----TLSPEIGQLTLTVG 270

Query: 251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK 310
           S  K +   GWR+GW V S  + +L       +      I     + +Q A      +  
Sbjct: 271 SAGKSFAATGWRIGW-VLSLNAELLSYAAKAHT-----RICFASPSPLQEACANSINDAL 324

Query: 311 ED-FFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV----------KLNLSLL 359
           +  +F K+     +   I      E+  +     PEG+ FV+V                +
Sbjct: 325 KIGYFEKMRQEYINKFKIFTSIFDELG-LPYT-APEGTYFVLVDFSKVKIPEDYPYPEEI 382

Query: 360 EGISDDMEFALQLAKEESVIVLPGMA-------VGMKNWLRITFAIEPSALEEGLGRIKA 412
                D   +  L  E  V+ +P             +N LR     + + LE  + R+K 
Sbjct: 383 LNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKL 442

Query: 413 F 413
            
Sbjct: 443 L 443

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  194 bits (495), Expect = 6e-58
 Identities = 91/396 (22%), Positives = 162/396 (40%), Gaps = 50/396 (12%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNS 101
             I  L  G P        TP   +   + +   +     YS S GI   R A A Y   
Sbjct: 43  VRIHHLNIGQPD-LK----TP---EVFFERIYENKPEVVYYSHSAGIWELREAFASYYKR 94

Query: 102 ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFD 161
                + P++V +T G  +AI     V+A PG  IL+ +P +  Y A A+   +++    
Sbjct: 95  RQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVT 154

Query: 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221
              E+G+ +    LE+  +E T  +V+ NP NP G V+   +++ + E A + G+ +I D
Sbjct: 155 RRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVD 213

Query: 222 EVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276
           EVY  + F        G F S +      V+ + S+SK++   G R+G L+T +   I  
Sbjct: 214 EVYSEIVFR-------GEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISH 266

Query: 277 ELRIVDSIKGYLNISSGPATFVQ-GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335
            +++             P    Q G+V  +  N  + FF  + +  R+  +    +++E 
Sbjct: 267 AMKLAQGR-------LAPPLLEQIGSVGLL--NLDDSFFDFVRETYRERVETVLKKLEEH 317

Query: 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE-----ESVIVLPGMAVGM-- 388
                  KP G+ ++  +L       + D  EFA  +  +     E+ +V P     +  
Sbjct: 318 GLKRFT-KPSGAFYITAEL------PVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTP 370

Query: 389 ---KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
              K  +RI   +E   L   +  +    +     +
Sbjct: 371 GLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCSSR 406

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  193 bits (492), Expect = 2e-57
 Identities = 99/396 (25%), Positives = 158/396 (39%), Gaps = 46/396 (11%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
            + LG G    FP     P    A  DA+     + Y P  G  P RRAIA         
Sbjct: 27  AVNLGQG----FPDEDGPPKMLQAAQDAIA-GGVNQYPPGPGSAPLRRAIAAQRRRHFGV 81

Query: 106 KLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
              P+ +V +T G  +AI   +  L  PG+ +LL +P +  Y               L+P
Sbjct: 82  DYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVP 141

Query: 165 EK-GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223
           +  G+ +D D L       T A++I +P NP G V +  +L  IAE A    ++VI+DEV
Sbjct: 142 DGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEV 201

Query: 224 YDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278
           Y+HL F    ++ +    +         IT+ S +K +   GW++GW     P+ ++  +
Sbjct: 202 YEHLVFDHARHLPL----AGFDGMAERTITISSAAKMFNCTGWKIGWACG--PAELIAGV 255

Query: 279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--P 336
           R   + K YL+         Q AV       ++ + + + + LR   D     + EI   
Sbjct: 256 R---AAKQYLSYVG--GAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEIGFA 309

Query: 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG------------- 383
                    G+ F+    +   L G  D  EF   L ++  V  +P              
Sbjct: 310 VH----DSYGTYFLCA--DPRPL-GYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQ 362

Query: 384 MAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
            A    + +R TF      L+E + R+    +R A 
Sbjct: 363 QADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERPAT 398

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  192 bits (489), Expect = 6e-57
 Identities = 77/410 (18%), Positives = 153/410 (37%), Gaps = 41/410 (10%)

Query: 39  KENDPRPIIPLGHGDPSA---FPCFRTTPVAADAVVDAVRSAEFD---CYSPSVGILPAR 92
           + ++   II +G  +                  A       + F     +    G+   +
Sbjct: 33  EVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFK 92

Query: 93  RAIADYLNS--ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
           +A+ D++           P+ + LTAG   A +  +  LA PG  +L+P P +P ++ + 
Sbjct: 93  KAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDL 152

Query: 151 R-HTRLEIRHFDLLPEKGWEVDLDGLEA------LADENTVAMVIVNPGNPCGNVFTYQQ 203
           +  T +EI         G+++    LE         +     +++ NP NP G   T  +
Sbjct: 153 KWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNE 212

Query: 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP----------VITLGSMS 253
           L  +       GI +ISDE+Y    F S  ++ +                  V  + S+S
Sbjct: 213 LYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLS 272

Query: 254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDF 313
           K   +PG+R+G + ++D   ++     +        + S     +  A+    K   +++
Sbjct: 273 KDLGLPGFRVGAIYSNDD-MVVAAATKM----SSFGLVSSQTQHLLSAMLSD-KKLTKNY 326

Query: 314 FSKIVDILRDTADICYDRIKE--IPCITCPRKPEGSMFVMVKLNLSLLE-GISDDMEFAL 370
            ++    L+         +++  I C+         +F  V +   L       +ME   
Sbjct: 327 IAENHKRLKQRQKKLVSGLQKSGISCL----NGNAGLFCWVDMRHLLRSNTFEAEMELWK 382

Query: 371 QLAKEESVIVLPGMAVGMK--NWLRITFAIEP-SALEEGLGRIKAFCQRH 417
           ++  E  + + PG +       W R+ FA  P   L+  + R+KAF   +
Sbjct: 383 KIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 432

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  190 bits (485), Expect = 8e-57
 Identities = 89/380 (23%), Positives = 150/380 (39%), Gaps = 37/380 (9%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
            I L  G    FP F       + +   V     + Y+P  G+   R AIA         
Sbjct: 32  AINLSQG----FPDFDGPRYLQERLAHHVA-QGANQYAPMTGVQALREAIAQKTERLYGY 86

Query: 106 KLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
           +   D D+ +TAG  +A+   +T L R G  ++   P +  Y      +   ++   L P
Sbjct: 87  QPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQP 146

Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
              + VD     AL  E T  +++  P NP   V+       + +      I VISDEVY
Sbjct: 147 P-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVY 205

Query: 225 DHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
           +H+ F    +  +       P      + + S  K + + GW++G+ V   P+ I  E+R
Sbjct: 206 EHINFSQQGHASV----LAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA--PAPISAEIR 259

Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--PC 337
               +  YL  S    T  Q A+  + +  + + +  + D  R   DI  + + E     
Sbjct: 260 ---KVHQYLTFSV--NTPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNESRLEI 313

Query: 338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLR 393
           +      EG+ F++V  + S +    DD+EF   L +E  V  +P             +R
Sbjct: 314 L----PCEGTYFLLV--DYSAV-STLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIR 366

Query: 394 ITFAIEPSALEEGLGRIKAF 413
           + FA + S L     R++  
Sbjct: 367 LCFAKKESTLLAAAERLRQL 386

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  188 bits (480), Expect = 1e-55
 Identities = 68/407 (16%), Positives = 142/407 (34%), Gaps = 38/407 (9%)

Query: 39  KENDPRPIIPLGHGDPSA---FPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARR 93
              +P  +I +G  +                  ++      +      +    G+   R+
Sbjct: 31  PLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRK 90

Query: 94  AIADYLNSEL--PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
           AIA ++        +  P+ V +  G   A + I+  LA PG   L+P P +P +  + R
Sbjct: 91  AIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLR 150

Query: 152 -HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQL 204
             T +++          +++    ++   +           +++ NP NP G       L
Sbjct: 151 WRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTL 210

Query: 205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYV------RMGVFGSTVP--VITLGSMSKRW 256
           + +     +  I ++ DE+Y    F +  +V                  V  + S+SK  
Sbjct: 211 KSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM 270

Query: 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSK 316
            +PG+R+G +  S    ++   R +        + S    +   A+    +   ++F  +
Sbjct: 271 GLPGFRVGIIY-SFNDDVVNCARKM----SSFGLVSTQTQYFLAAMLSD-EKFVDNFLRE 324

Query: 317 IVDILRDTADICYDRIKE--IPCITCPRKPEGSMFVMVKLNLSLLE-GISDDMEFALQLA 373
               L        + ++   I C+    K    +F  + L   L E     +M     + 
Sbjct: 325 SAMRLGKRHKHFTNGLEVVGIKCL----KNNAGLFCWMDLRPLLRESTFDSEMSLWRVII 380

Query: 374 KEESVIVLPGMAVGMK--NWLRITFAI-EPSALEEGLGRIKAFCQRH 417
            +  + V PG +   +   W R+ FA  +   ++  L RI+ F    
Sbjct: 381 NDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  186 bits (475), Expect = 4e-55
 Identities = 80/393 (20%), Positives = 161/393 (40%), Gaps = 50/393 (12%)

Query: 46  IIPLGHGDPSAFPCFRTTPV----AADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNS 101
           +     G+PS  P     P         +V    S     Y+ + G +  R AIA++LN+
Sbjct: 37  VYDFSIGNPS-IP----APQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNN 91

Query: 102 ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN-ILLPKPGFPLYEANARHTRLEIRHF 160
                 + D++Y+T G   ++ +    L     +  +   P FP Y+         +   
Sbjct: 92  THGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEV 151

Query: 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK------L 214
               E  +++D D LE   + +T  ++I +P NP G V++ + ++K+++   K       
Sbjct: 152 PADTE-HFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGR 210

Query: 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTS 269
            I +I+DE Y  + +        G+    V       +   S SK   +PG R+G+++  
Sbjct: 211 PIFIIADEPYREIVYD-------GIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLV- 262

Query: 270 DPSGILQELRIVDSIKGY---LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD 326
            P  +  +  +  ++ G    L     P+ F +  V         D     ++  ++  D
Sbjct: 263 -PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQ--GATGD-----INAYKENRD 314

Query: 327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV 386
           + Y+ +  I    C  KP+G+ ++ VK          D   F  + AKEE V+++     
Sbjct: 315 LLYEGLTRIG-YHCF-KPDGAFYMFVKAL------EDDSNAFC-EKAKEEDVLIVAADGF 365

Query: 387 GMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
           G   W+RI++ ++   ++  +   +   +++ K
Sbjct: 366 GCPGWVRISYCVDREMIKHSMPAFEKIYKKYNK 398

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  186 bits (475), Expect = 5e-55
 Identities = 75/402 (18%), Positives = 138/402 (34%), Gaps = 45/402 (11%)

Query: 46  IIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
            I LG G              +  D V     +     Y    G      A+A  L   L
Sbjct: 33  AIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETL 92

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK---PGFPLYEANARHTRLEIR-- 158
              + P ++ LT G + A   +  + A   A+    K   P  P Y   A     +    
Sbjct: 93  GWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFV 152

Query: 159 ----HFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214
               + +LLPE  ++  +D       E T  + +  P NP GNV T ++L K+   A + 
Sbjct: 153 SARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQH 212

Query: 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI 274
            I ++ D  Y     G        ++     +I   S+SK   +PG R G ++       
Sbjct: 213 NIPLVIDNAYGVPFPGIIFSEARPLWNPN--IILCMSLSK-LGLPGSRCGIIIA--NDKT 267

Query: 275 LQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT----ADICYD 330
           +  +     + G ++++ G        + ++ K    D       +++            
Sbjct: 268 ITAIAN---MNGIISLAPG--GMGPAMMCEMIKR--NDLLRLSETVIKPFYYQRVQQTIA 320

Query: 331 RIKE---IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA-- 385
            I+            KPEG++F+ +       + +    E   Q  K   V+++PG    
Sbjct: 321 IIRRYLSEERCLIH-KPEGAIFLWLW-----FKDLPITTELLYQRLKARGVLMVPGHYFF 374

Query: 386 -------VGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420
                        +R+ +  EP  +E G+  +    +R  ++
Sbjct: 375 PGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERAWRE 416

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  186 bits (474), Expect = 1e-54
 Identities = 88/405 (21%), Positives = 166/405 (40%), Gaps = 57/405 (14%)

Query: 47  IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVGILPARRAIADYLNSELP 104
           + LG G    FP +     A +A+  A  S +     Y+   G     +A++   +  + 
Sbjct: 40  LNLGQG----FPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVD 95

Query: 105 CKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163
             ++P  +V +T G  +A+   +      G  +++ +P F  YE   +      R   L 
Sbjct: 96  RTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLK 155

Query: 164 PEKG--------WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215
           P K         W +D + LEAL +E T  ++I  P NP G V    +L+ +A   +K  
Sbjct: 156 PNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWN 215

Query: 216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSD 270
           ++ +SDEVY+H+ F    ++R+     T+P      IT+GS  K + + GW++GW     
Sbjct: 216 VLCVSDEVYEHMVFEPFEHIRI----CTLPGMWERTITIGSAGKTFSLTGWKIGWAYG-- 269

Query: 271 PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKE------DFFSKIVDILRDT 324
           P  +L+ L+    +      +   AT +Q A+   F+   +       +F+ I   L   
Sbjct: 270 PEALLKNLQ---MVHQNCVYTC--ATPIQEAIAVGFETELKRLKSPECYFNSISGELMAK 324

Query: 325 ADICYDRIKEI--PCITCPRKPEGSMFVMV-------KLNLSLLEGISDDMEFALQLAKE 375
            D     + E+          P+G  F++        K++L+       D  F   + K 
Sbjct: 325 RDYMASFLAEVGMNPT----VPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKS 380

Query: 376 ESVIVLPGMA-------VGMKNWLRITFAIEPSALEEGLGRIKAF 413
             +  +P  A          ++++R  F  +   L++    ++ +
Sbjct: 381 VGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKW 425

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  183 bits (467), Expect = 4e-54
 Identities = 98/386 (25%), Positives = 166/386 (43%), Gaps = 47/386 (12%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
            + LG G    FP     P   +AV  A+   +   Y+P  G+   R A+A+        
Sbjct: 27  AVNLGQG----FPSNPPPPFLLEAVRRALGRQDQ--YAPPAGLPALREALAEEF------ 74

Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL-LP 164
            + P+ V +T+G  +A+ V+L  L  PG  +++ +P F +Y  +A     + R   L L 
Sbjct: 75  AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLT 134

Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
            +G+ +DL  LE      T A+++  P NP G VF  ++L+ IA  AR   + +ISDEVY
Sbjct: 135 PEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVY 194

Query: 225 DHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282
           D L +G  P           P    T+GS  KR    G+R+GW+V   P   +  L    
Sbjct: 195 DELYYGERPRRLR----EFAPERTFTVGSAGKRLEATGYRVGWIVG--PKEFMPRLA--- 245

Query: 283 SIKGYLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEI--PCIT 339
            ++ + + S+   T +Q  V +  K  + + F+  + +  R   D+    ++ +      
Sbjct: 246 GMRQWTSFSA--PTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVY- 302

Query: 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRIT 395
               PEG+ F+M +        +      A +L +E  V ++P  A  +    K+  R  
Sbjct: 303 ---VPEGTYFLMAE--------LPG--WDAFRLVEEARVALIPASAFYLEDPPKDLFRFA 349

Query: 396 FAIEPSALEEGLGRIKAFCQRHAKQQ 421
           F      L   L R+        + +
Sbjct: 350 FCKTEEELHLALERLGRVVNSPREAE 375

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  182 bits (464), Expect = 2e-53
 Identities = 79/379 (20%), Positives = 148/379 (39%), Gaps = 20/379 (5%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
             II L  G+P       T P   + +    +  +   YS S GI   RRAI+ +     
Sbjct: 37  EDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRY 92

Query: 104 PCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL 162
             ++ P+    +T G K+ +  ++      G  IL+P P +P++   A     ++R   L
Sbjct: 93  DVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPL 152

Query: 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
           +P   +  +L+     +      M++  P NP          +++   A++  +MV+ D 
Sbjct: 153 VPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDL 212

Query: 223 VYDHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
            Y  + + G      M V G+    +   ++SK + + GWR+G++V      ++  L  +
Sbjct: 213 AYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVG--NPELVSALARI 270

Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP 341
            S         G  T +Q A     +   +     I    +   D+    ++E       
Sbjct: 271 KS-----YHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGW-MVE 323

Query: 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIE 399
             P+ SM+V  K+           +EFA +L ++  V V PG+  G    + +R      
Sbjct: 324 -NPKASMYVWAKIPEPYAHL--GSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIEN 380

Query: 400 PSALEEGLGRIKAFCQRHA 418
              L + +  IKA  +   
Sbjct: 381 RDRLRQAVRGIKAMFRADG 399

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  182 bits (463), Expect = 3e-53
 Identities = 81/393 (20%), Positives = 153/393 (38%), Gaps = 51/393 (12%)

Query: 57  FPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLT 115
           FP         + +  A      + Y+   G     +A++         ++ P+ ++ + 
Sbjct: 32  FPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVA 91

Query: 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK--------- 166
            G   ++   +  L  PG  +++  P +  YE   R          L  +          
Sbjct: 92  VGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSS 151

Query: 167 GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226
            W  D   LE+     T A+++  P NP G V+T Q+LQ IA+   K   + ISDEVY+ 
Sbjct: 152 DWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEW 211

Query: 227 LTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           L +    +V++    +T+P      IT+GS  K + V GW+LGW +   P+ +++ L+  
Sbjct: 212 LVYTGHTHVKI----ATLPGMWERTITIGSAGKTFSVTGWKLGWSIG--PAHLIKHLQ-- 263

Query: 282 DSIKGYLNISSGPATFVQGAV------PQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335
            +++     +   AT +Q A+           +  E +F+ +   L    D     +  +
Sbjct: 264 -TVQQNSFYTC--ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV 320

Query: 336 --PCITCPRKPEGSMFVMV---KLNLSLLEGIS---DDMEFALQLAKEESVIVLPG---- 383
               I     P+G  F++     L   L +  S    D +F   + K + +  +P     
Sbjct: 321 GLKPI----VPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFC 376

Query: 384 ---MAVGMKNWLRITFAIEPSALEEGLGRIKAF 413
                   +  +R  F  + S L+      +A+
Sbjct: 377 DSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAW 409

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  180 bits (460), Expect = 6e-53
 Identities = 69/384 (17%), Positives = 134/384 (34%), Gaps = 33/384 (8%)

Query: 47  IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE---FDCYSPSVGILPARRAIADYLNSEL 103
           +   HGD         TP    A        +      Y+   G L  R  +A  L +  
Sbjct: 42  VDFSHGDVD-AH--EPTP---GAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFT 95

Query: 104 PCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-----ANARHTRLEI 157
              +   D + +T G + A+ + +      G  + + +P +                +++
Sbjct: 96  GAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQL 155

Query: 158 RHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIM 217
            +     E    +DL GLE          +  NP NP G V++ +++ +IA  A + G  
Sbjct: 156 DYVSA-DETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGAT 214

Query: 218 VISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275
           VI+D++Y  L +    Y  +    +     V+T+   SK   + G+RLG         I+
Sbjct: 215 VIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFG--SRAII 272

Query: 276 QELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335
             +  + +      +S   A + Q  +   F      +    +   +   D     ++  
Sbjct: 273 ARMEKLQA-----IVSLRAAGYSQAVLRGWFDEA-PGWMEDRIARHQAIRDELLHVLRGC 326

Query: 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--MKNWLR 393
             +     P+   ++       L +      EF   L  +  V+V PG        + +R
Sbjct: 327 EGVFAR-TPQAGSYLFP----RLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVR 381

Query: 394 ITFAIEPSALEEGLGRIKAFCQRH 417
           + F+ +  A      RI    +R+
Sbjct: 382 LNFSQDHEAAVAAARRIVTLVERY 405

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  179 bits (456), Expect = 5e-52
 Identities = 72/446 (16%), Positives = 147/446 (32%), Gaps = 69/446 (15%)

Query: 27  VRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC----- 81
           +   +  +   LK + P  +  LG G+P+         +     +               
Sbjct: 17  ISQLMDDLGDALKSDQP--VNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAII 74

Query: 82  ----YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN-- 135
               YS   G      A+  + N      L+ +++ LT G + A   +  +      N  
Sbjct: 75  SMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEH 134

Query: 136 -------------ILLPKPGFPLYEANARHT------RLEIRHFDLLPEKGW---EVDLD 173
                        +L   P +  Y                I       E+G+    VD +
Sbjct: 135 SQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFE 194

Query: 174 GLEALA---DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG 230
            LE L    +    A+    P NP GNV T +++  +AE A++  I +I D  Y      
Sbjct: 195 ALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPN 254

Query: 231 STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI 290
                    + +    I   S+SK   +PG R G +V    + +++ +     +   +N+
Sbjct: 255 IIYSDAHLNWDNN--TILCFSLSK-IGLPGMRTGIIVA--DAKVIEAVSA---MNAVVNL 306

Query: 291 SSGPATFVQGAVPQIFKN--TKEDFFSKIVDILRDTADICYDRIKEIPC---ITCPRKPE 345
           +     F       +  N   K+   ++I    +  A +    +K+      +    KPE
Sbjct: 307 APT--RFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIH-KPE 363

Query: 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA----------VGMKNWLRIT 395
           G++F+ +       +     ++   +  K +  +++P                   +R++
Sbjct: 364 GAIFLWLWFK----DLPISTLDLY-ERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMS 418

Query: 396 FAIEPSALEEGLGRIKAFCQRHAKQQ 421
            A +   L +G+  I    +     +
Sbjct: 419 IAADEQTLIDGIKVIGEVVRELYDNK 444

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  177 bits (452), Expect = 5e-52
 Identities = 79/373 (21%), Positives = 133/373 (35%), Gaps = 26/373 (6%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
             +I L  G                A+ +A+       Y      LP     A +     
Sbjct: 25  VGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRY 80

Query: 104 PCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL 162
              L P        G ++ +  +L  L  P   +LLP+  +P Y   AR   L      L
Sbjct: 81  GVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL 140

Query: 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
             +     DL  +          +++  P NP G V  +   ++    ARK G+ +I D 
Sbjct: 141 RED--GLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDN 198

Query: 223 VYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282
            Y    +       + + G+   V+ L S+SK + + G+RLG+ +       L  L  V 
Sbjct: 199 PYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALG--SEEALARLERVK 256

Query: 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342
                  I       V     +  K   ++       + R+ A    + +K +  ++   
Sbjct: 257 G-----VIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV--LSLL- 307

Query: 343 KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEP 400
            P  +M++  +L     EG+  D+EF L+L  E  V + PG   G   K ++RI      
Sbjct: 308 PPRATMYLWGRLP----EGVD-DLEFGLRLV-ERGVALAPGRGFGPGGKGFVRIALVRPL 361

Query: 401 SALEEGLGRIKAF 413
             L E   RI+  
Sbjct: 362 EELLEAAKRIREA 374

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  177 bits (452), Expect = 5e-52
 Identities = 88/375 (23%), Positives = 159/375 (42%), Gaps = 35/375 (9%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
           + +I L  G+P     F T     D  + +++      Y+ S GIL  R  I++    + 
Sbjct: 29  KKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKDKY 83

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163
              + PD++ +T G    +   L+ +   G  +L+  P +P Y+   R    +    D  
Sbjct: 84  KADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCDFT 143

Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223
            E         LE    + T A++I +P NP G V      ++I E A +    +ISDE+
Sbjct: 144 VES--------LEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYIISDEI 191

Query: 224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
           Y+ L +    Y  +    +    I +   SK + + GWR+G++++     I++ +  +  
Sbjct: 192 YNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVIS--NDEIIEAILKLQQ 249

Query: 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343
                N+     T  Q A  + F+   E   + ++        +    +K+         
Sbjct: 250 -----NLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFG-WEVN-N 302

Query: 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPS 401
           P G+ +V   +         D  EFA +L KE+ V + PG+  G   KN++RI++A    
Sbjct: 303 PIGAYYVFPNIG-------EDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYE 355

Query: 402 ALEEGLGRIKAFCQR 416
            ++EGL RIK F  +
Sbjct: 356 NIKEGLERIKEFLNK 370

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  178 bits (454), Expect = 6e-52
 Identities = 80/409 (19%), Positives = 158/409 (38%), Gaps = 59/409 (14%)

Query: 45  PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-AEFDCYSPSVGILPARRAIADYLNSEL 103
            ++ LG G    FP F     A +A   AV      + Y+ + G  P  + +A +    L
Sbjct: 29  DVVNLGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELL 84

Query: 104 PCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL 162
             ++ P  +V +T G   A+      L   G  +++ +P F  YE              L
Sbjct: 85  GQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL 144

Query: 163 LPEK----------GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
            P             W++D   L       T A+V+  P NP G VF+ ++L+ +A   +
Sbjct: 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQ 204

Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLV 267
           +  ++ I+DEVY  + +    ++ +    +++P      +T+GS  K +   GW++GW++
Sbjct: 205 QHDVVCITDEVYQWMVYDGHQHISI----ASLPGMWERTLTIGSAGKTFSATGWKVGWVL 260

Query: 268 TSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV------PQIFKNTKEDFFSKIVDIL 321
              P  I++ LR   ++           T  Q AV       Q+       +F +    +
Sbjct: 261 G--PDHIMKHLR---TVHQNSVFHC--PTQSQAAVAESFEREQLLFRQPSSYFVQFPQAM 313

Query: 322 RDTADICYDRIKEI--PCITCPRKPEGSMFVMV--------KLNLSLLEGISDDMEFALQ 371
           +   D     ++ +    I     P+GS F++           +L        D  F   
Sbjct: 314 QRCRDHMIRSLQSVGLKPI----IPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKW 369

Query: 372 LAKEESVIVLPGMA-------VGMKNWLRITFAIEPSALEEGLGRIKAF 413
           + K + ++ +P              +++R  F  + + L+    +++ +
Sbjct: 370 MIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKW 418

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  174 bits (443), Expect = 2e-50
 Identities = 75/377 (19%), Positives = 147/377 (38%), Gaps = 23/377 (6%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
            P+I +  G P       T     D    A+   E   Y    G    ++AI D+   + 
Sbjct: 47  LPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQY 102

Query: 104 PCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL 162
              L  +D V +  G K  +  + T +  PG  +LLP PG+  Y A       +    +L
Sbjct: 103 NVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNL 162

Query: 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
            P   +  D   +++   + T  + +  P NP G+  T +   +   K +     ++ D 
Sbjct: 163 EPP-HYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDF 221

Query: 223 VYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282
            Y    F +     +         I + S+SK + + G+R+G+ V      ++Q L+   
Sbjct: 222 AYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG--NKDMIQALKKYQ 279

Query: 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342
           +     + ++G    +Q A      +  +DF  +  ++ +   D     + +        
Sbjct: 280 T-----HTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADL-PFV- 331

Query: 343 KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEP 400
             +G ++V ++       G  D  +F   L +E+S++V PG   G     ++RI+ A++ 
Sbjct: 332 HAKGGIYVWLETP----PGY-DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDD 386

Query: 401 SALEEGLGRIKAFCQRH 417
             L+E   R+      +
Sbjct: 387 QKLDEAAIRLTELAYLY 403

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score =  173 bits (442), Expect = 2e-50
 Identities = 79/389 (20%), Positives = 161/389 (41%), Gaps = 48/389 (12%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
             +     G+P     F T     +A   A+       Y P+ G    R AIA  L  + 
Sbjct: 30  IDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDN 84

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP-------------GFPLYEANA 150
                 D++ +T G KQ+I  ++  +  PG  +++P P             G P+     
Sbjct: 85  GLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVI---- 140

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
                         E  ++V  + +       T  +V   P NP G V+T  +++ IA+ 
Sbjct: 141 ---------LPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQV 191

Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVT 268
           A + G+ V+SDE+Y+ + +    ++ +G          +     +K + + GWR+G+L  
Sbjct: 192 AVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAG 251

Query: 269 SDPSGILQELRIVDSIKGYLNISSGPATFVQ-GAVPQIFKNTKEDFFSKIVDILRDTADI 327
             P  +++    +       + +S   TF Q GA+        +D   +++    +    
Sbjct: 252 --PVPLVKAATKIQG-----HSTSNVCTFAQYGAIAAY--ENSQDCVQEMLAAFAERRRY 302

Query: 328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
             D +  +P + CP KP+G+ ++    +++  +     ++F  +L  +  V  +PG A G
Sbjct: 303 MLDALNAMPGLECP-KPDGAFYMFP--SIA--KTGRSSLDFCSELLDQHQVATVPGAAFG 357

Query: 388 MKNWLRITFAIEPSALEEGLGRIKAFCQR 416
             + +R+++A +   ++ G+ R++ F   
Sbjct: 358 ADDCIRLSYATDLDTIKRGMERLEKFLHG 386

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  170 bits (432), Expect = 4e-49
 Identities = 75/388 (19%), Positives = 144/388 (37%), Gaps = 45/388 (11%)

Query: 43  PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSE 102
            +  + LG G+P     F T     DA+ +       + Y  S      R A   +    
Sbjct: 22  KKRGLDLGIGEP----QFETPKFIQDALKNHT--HSLNIYPKSAFEESLRAAQRGFFKRR 75

Query: 103 LPCKLSPDDVYLTAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHF 160
              +L  +++  T G ++ +    + +        I  P P + +YE  A+  + +    
Sbjct: 76  FKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM 135

Query: 161 DLLPEKGWEVDLDGLEALADENTVAMVIVN-PGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
            L  E  +   L+  E    E  V +VI+N P NP G   + ++L    + A K   ++I
Sbjct: 136 PLTKENDFTPSLN--EKELQE--VDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILI 191

Query: 220 SDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSDPSGI 274
           +DE Y  +   + P   +             V+ + S+SKR   PG R G++   D   +
Sbjct: 192 NDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA-GDSR-L 249

Query: 275 LQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334
           L++ +   +      +    A  +Q A    + +  +       +I  +   +     K 
Sbjct: 250 LEKYKAFRA-----YLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFKN 302

Query: 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN---- 390
                       S +V +         + +   FA  L + E +I LP + +G       
Sbjct: 303 TL------IYPYSFYVYLP--------VQNGENFAKTLYQNEGIITLPALYLGRNRIGAD 348

Query: 391 WLRITFAIEPSALEEGLGRIKAFCQRHA 418
           ++R+    +   LE+ L  I+ + + HA
Sbjct: 349 YVRLALVYDTPLLEKPLEIIETYRENHA 376

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  169 bits (430), Expect = 1e-48
 Identities = 89/381 (23%), Positives = 169/381 (44%), Gaps = 31/381 (8%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           +I LG G+P     F T     +   +A+       Y P++G+L  R AIA+ L  +   
Sbjct: 28  VISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNGI 82

Query: 106 KLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
           +  P   + +  G  QA  + L+   + G  +L+P P F  Y         +        
Sbjct: 83  EADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYE 142

Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
           E  + +++D L+    + T A++I +P NP G V T + L++IA+   +  ++VISDEVY
Sbjct: 143 EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVY 202

Query: 225 DHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
           +H  +    +  +     ++       IT+   SK + + GWRLG++    PS I++ + 
Sbjct: 203 EHFIYDDARHYSIA----SLDGMFERTITVNGFSKTFAMTGWRLGFVAA--PSWIIERMV 256

Query: 280 IVDSIKGYLNISSGPATFVQ-GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI 338
                      ++ P TF+Q  A   +          ++         + + R+ E+  +
Sbjct: 257 KFQM-----YNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMG-L 310

Query: 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITF 396
               KP+G+ ++  ++     +      +F+  + KE  V V+PG A G   + ++RI++
Sbjct: 311 PTV-KPKGAFYIFPRIR----DTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISY 365

Query: 397 AIEPSALEEGLGRIKAFCQRH 417
           A     LEE + R++   +  
Sbjct: 366 ATAYEKLEEAMDRMERVLKER 386

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score =  162 bits (412), Expect = 5e-46
 Identities = 82/381 (21%), Positives = 158/381 (41%), Gaps = 35/381 (9%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
             ++ L  G+P     F T     +A   A+       Y+P  GI   R A+A+    E 
Sbjct: 31  VDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRREN 85

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163
              ++P++  +T G  QA+  +   +  PG  +++  P +  Y    R     +   + L
Sbjct: 86  GLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETL 145

Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223
           PE+G+  D + +       T A+V+ +P NP G V+  + L+ +A  A +    ++SDE+
Sbjct: 146 PEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEI 205

Query: 224 YDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           Y+HL +    +      G   P   +T+   +K + + GWR+G+     P  +       
Sbjct: 206 YEHLLYEGEHF----SPGRVAPEHTLTVNGAAKAFAMTGWRIGYACG--PKEV------- 252

Query: 282 DSIKGYLNI----SSGPATFVQ-GAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEI 335
             IK   ++    ++ P T  Q   +  +        F     +  R   D+  + +  +
Sbjct: 253 --IKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310

Query: 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395
             +    +P G+ +V++  + S +    D++  A +L  E  V V+PG        +R++
Sbjct: 311 G-LKAV-RPSGAFYVLM--DTSPIAP--DEVRAAERL-LEAGVAVVPGTDFAAFGHVRLS 363

Query: 396 FAIEPSALEEGLGRIKAFCQR 416
           +A     L + L R      R
Sbjct: 364 YATSEENLRKALERFARVLGR 384

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score =  161 bits (410), Expect = 9e-46
 Identities = 91/392 (23%), Positives = 158/392 (40%), Gaps = 65/392 (16%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
             +I L  G+P     F T     +  V  ++      Y+   GI   R  IA  +    
Sbjct: 41  EDVINLTAGEPD----FPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIGERY 95

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR---------HTR 154
              +SPD V +T G KQA+      L  PG  +++  P +  Y               T 
Sbjct: 96  KKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETF 155

Query: 155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214
           +  ++F    E+        +E L    T A++I +P NP G V+  + L+ +   A+K 
Sbjct: 156 MS-KNFQPSLEE--------VEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKR 206

Query: 215 GIMVISDEVYDHLTFGSTPYVRMGVFGS--TVP-----VITLGSMSKRWIVPGWRLGWLV 267
              +ISDEVYD L +          F S   V      ++ +   SK   + GWR+G+L+
Sbjct: 207 NFYIISDEVYDSLVYT-------DEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLI 259

Query: 268 TSDPSGILQELRIVDSIKGYLNI----SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323
           +     +               I    +S   T  Q A  +  +         +V   ++
Sbjct: 260 S--SEKV---------ATAVSKIQSHTTSCINTVAQYAALKALEVDNS----YMVQTFKE 304

Query: 324 TADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383
             +   +R+K++  +    +PEG+ ++  K+         DD++F  +L +E+ V ++PG
Sbjct: 305 RKNFVVERLKKMG-VKFV-EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALVPG 355

Query: 384 MAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415
            A     ++R++FA     L E L RI+ F  
Sbjct: 356 SAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score =  159 bits (405), Expect = 5e-45
 Identities = 71/394 (18%), Positives = 137/394 (34%), Gaps = 41/394 (10%)

Query: 34  IKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVR----SAEFDCYSPSVGIL 89
           + Q   EN    +I L  GD +  P        A+A   ++           Y P  G+ 
Sbjct: 23  VAQFRLENPQHTVINLSIGDTT-QP---LNASVAEAFASSIARLSSPTTCRGYGPDFGLP 78

Query: 90  PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN 149
             R+ +++         +   +++++ G K  +  +L+    P   + +  P +P Y   
Sbjct: 79  ALRQKLSEDFYRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDI 134

Query: 150 ARHT-RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIA 208
           AR T   EI     L E  +  +        D +   + + +P NP G V    QL+ I 
Sbjct: 135 ARLTGAKEIIALPCLQENAFFPEFP-----EDTHIDILCLCSPNNPTGTVLNKDQLRAIV 189

Query: 209 EKARKLGIMVISDEVYDHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267
             A +  I+++ D  Y       S P     +  +    I + S SK     G RLGW V
Sbjct: 190 HYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTV 249

Query: 268 ------TSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321
                  +D   ++Q+     S        +G +   Q A         +    + +   
Sbjct: 250 IPQELTYADGHFVIQDWERFLS-----TTFNGASIPAQEAGVAGLSILPQ---LEAIHYY 301

Query: 322 RDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL 381
           R+ +D+    +            E + ++ VK      +    D +      +E  + + 
Sbjct: 302 RENSDLLRKALLATGF-EVF-GGEHAPYLWVKPT----QANISDRDLFDFFLREYHIAIT 355

Query: 382 PGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413
           PG+  G     ++R +   +   +     R++  
Sbjct: 356 PGIGFGRSGSGFVRFSSLGKREDILAACERLQMA 389

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score =  161 bits (410), Expect = 1e-44
 Identities = 84/441 (19%), Positives = 148/441 (33%), Gaps = 83/441 (18%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
            +   H +                V + V  A  + Y      L     I +Y   EL  
Sbjct: 105 AVNYCHTEL-GLN----RD---KVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSY 156

Query: 106 K----LSPDDVYLTAGCKQAIQVILTVLAR-----PGANILLPKPGFPLYEANAR--HTR 154
           K        D++ T G   AI      LA       G  I + +P F  Y          
Sbjct: 157 KDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYE 216

Query: 155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK- 213
           L         +  WE++ + +E L D +  A+++VNP NP    F    L  I +   K 
Sbjct: 217 LVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKN 276

Query: 214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWL----- 266
             +M+ISDEVY                 S VP   + + S SK +   GWRLG +     
Sbjct: 277 PKLMIISDEVYGAFVPNFKS------IYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEK 330

Query: 267 ------------------------VTSDPSGILQELRIV-DSIKGYLNISSGPATFVQ-- 299
                                   V  DP  +    R+  DS    L  ++G +T  Q  
Sbjct: 331 NVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIM 390

Query: 300 -------GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV 352
                    +      + + +      ++ +  D  +D + + P            + ++
Sbjct: 391 EALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAM-QAPKDETD--TNTHYYSLI 447

Query: 353 KLNLSL-----------LEGISDDMEFALQLAKEESVIVLPGMAVGMKNW-LRITFAIEP 400
            +               L    + ++F L+LA++  V+++ G+  G K   LR++ A  P
Sbjct: 448 DIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLP 507

Query: 401 SALEEGLGR-IKAFCQRHAKQ 420
           +     +G+ +    + + ++
Sbjct: 508 TEDYALIGKQVLELLKEYYEE 528

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score =  158 bits (402), Expect = 3e-44
 Identities = 76/416 (18%), Positives = 134/416 (32%), Gaps = 55/416 (13%)

Query: 33  IIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPAR 92
               +L +     +I LG GD +       T   A    +      +  Y    G  P R
Sbjct: 45  RRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLR 104

Query: 93  RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY------ 146
            AIA          +  DDV+++ G K  I  +  +       I +  P +P Y      
Sbjct: 105 AAIAKTFYGG--LGIGDDDVFVSDGAKCDISRLQVMFG-SNVTIAVQDPSYPAYVDSSVI 161

Query: 147 ------EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200
                           I +    PE G+  DL  +       T  +   +P NP G   T
Sbjct: 162 MGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDIIFFCSPNNPTGAAAT 216

Query: 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVP-----VITLGSMS 253
            +QL ++ E A+K G +++ D  Y        P        S   +P      +   S S
Sbjct: 217 REQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR-------SIFEIPGAEEVAMETASFS 269

Query: 254 KRWIVPGWRLGW------LVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFK 307
                 G RLGW      L+ SD   + ++    + I       +G +   Q        
Sbjct: 270 NYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF---NRIICTCF--NGASNISQAGALACLT 324

Query: 308 NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDME 367
               +   K++   ++  +I  D    +         + + +V V          S   +
Sbjct: 325 PEGLEAMHKVIGFYKENTNIIIDTFTSLGY-DVY-GGKNAPYVWVHFP----NQSS--WD 376

Query: 368 FALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
              ++ ++  V+  PG   G   + ++R++       + E   R K   + H    
Sbjct: 377 VFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYKHHHHHH 432

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score =  158 bits (401), Expect = 2e-43
 Identities = 66/435 (15%), Positives = 126/435 (28%), Gaps = 87/435 (20%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA-DYLNSELP 104
            +                      + + V       Y     +L     I   Y+  E+ 
Sbjct: 106 SLSYVRDQL-GLD----PA---AFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMG 157

Query: 105 CKLSPD---DVYLTAGCKQAIQVILTVLAR-----PGANILLPKPGFPLYE-----ANAR 151
               P    +++   G   A+  I   L        G  + +  P F  Y      A   
Sbjct: 158 ADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYA 217

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
              + I      P   W+     L+ L D        VNP NP       + L+++    
Sbjct: 218 LEEVAIN---ADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIV 274

Query: 212 RK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWL- 266
            +    +M+++D+VY                 +  P   + + S SK +   GWRLG + 
Sbjct: 275 AEHRPDLMILTDDVYGTFADDFQS------LFAICPENTLLVYSFSKYFGATGWRLGVVA 328

Query: 267 ----------------------------VTSDPSGILQELRIV-DSIKGYLNISSGPATF 297
                                       +  D   +    R+V DS    LN ++G +T 
Sbjct: 329 AHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTP 388

Query: 298 VQGAVPQI----FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV- 352
            Q  +         +  +++   +  ++R      Y R   +P +          + ++ 
Sbjct: 389 QQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLY-RELGMPPLRDE--NAVDYYTLID 445

Query: 353 ----------KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW-LRITFAIEPS 401
                     +         S   +   ++A E  +++LPG   G      R + A   +
Sbjct: 446 LQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA---N 502

Query: 402 ALEEGLGRIKAFCQR 416
             E     I    ++
Sbjct: 503 LNEYEYAAIGRALRK 517

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  155 bits (393), Expect = 4e-43
 Identities = 52/406 (12%), Positives = 109/406 (26%), Gaps = 62/406 (15%)

Query: 43  PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPA----RRAIADY 98
                 +  GD      +      A AV+  V       Y  +           + I + 
Sbjct: 55  QGCSADVASGDGLFLEEYWKQHKEASAVL--VSPWHRMSYFFNPVSNFISFELEKTIKEL 112

Query: 99  LNSELPCKLSPDDVYLTAGCKQAIQVILTVLA--------RPGANILLPKPGFPLYEANA 150
                        +    G  Q I  ++  L+         P + ++   P +P++    
Sbjct: 113 HEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQT 172

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
           +        +       W  +      +++      ++ +P NP G +            
Sbjct: 173 K--------YFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLL----------RH 214

Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
           A   G   I D VY    +    Y            I L +MSK     G R GW +  D
Sbjct: 215 AVIKGCKSIYDMVYYWPHYTPIKYKAD-------EDILLFTMSKFTGHSGSRFGWALIKD 267

Query: 271 PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKN----------TKEDFFSKIVDI 320
            S     L  +         + G     Q    ++ K           T  D  +     
Sbjct: 268 ESVYNNLLNYMT------KNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKK 321

Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS------LLEGISDDMEFALQLAK 374
           LR+        + +    +    P+       +           ++   ++ +   Q  +
Sbjct: 322 LRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQ 381

Query: 375 EESVIVLPGMAVGM-KNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
              +    G+       ++R++        ++ +  +K   +   K
Sbjct: 382 NGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDMVKAKRK 427

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score =  147 bits (373), Expect = 2e-40
 Identities = 90/387 (23%), Positives = 158/387 (40%), Gaps = 56/387 (14%)

Query: 46  IIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVGILPARRAIADYLNS 101
           I+    G   P  FP       AA+A    +R        YSP+ G  P R  +A+++  
Sbjct: 34  ILSFAGGLPAPELFP----KEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIG- 88

Query: 102 ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPG-------FPLYEANARHTR 154
                + P++V +T G +QA+ ++  V    G+ +LL  P        F L         
Sbjct: 89  -----VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVP 143

Query: 155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP--GNPCGNVFTYQQLQKIAEKAR 212
                     E+G   DLD LE +        + + P   NP G +      +++ +   
Sbjct: 144 AG--------EEG--PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVM 193

Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVF---GSTVPVITLGSMSKRWIVPGWRLGWLVTS 269
           + G++V+ D+ Y  L FG      +           VI LGS SK  + PG R+ + V  
Sbjct: 194 ERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-VLSPGLRVAFAVA- 251

Query: 270 DPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329
                LQ+L      K   ++ +      Q  V ++ K    +   ++  + R+ A    
Sbjct: 252 -HPEALQKLVQA---KQGADLHT--PMLNQMLVHELLKEGFSERLERVRRVYREKAQAML 305

Query: 330 DRI-KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA--- 385
             + +E+P      +P+G MFV ++L     +G+        + A EE+V  +PG     
Sbjct: 306 HALDREVPKEVRYTRPKGGMFVWMELP----KGL-SAEGL-FRRALEENVAFVPGGPFFA 359

Query: 386 -VGMKNWLRITFA-IEPSALEEGLGRI 410
             G +N LR+++A ++   + EG+ R+
Sbjct: 360 NGGGENTLRLSYATLDREGIAEGVRRL 386

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score =  147 bits (373), Expect = 3e-40
 Identities = 84/395 (21%), Positives = 157/395 (39%), Gaps = 51/395 (12%)

Query: 40  ENDPRPIIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97
           +     +I L  G  DP   P      +A + +    +S     Y+P+ GI   R  +A 
Sbjct: 30  QKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM---YTPANGIPELREELAA 86

Query: 98  YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPG-------FPLYEANA 150
           +L      ++SP+++ +T G   A+ ++  VL  PG  ++   P        F    A  
Sbjct: 87  FLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKI 146

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEAL-----ADENTVAMVIVNP--GNPCGNVFTYQQ 203
               ++          G  + +D LE       A    V ++   P   NP G   + ++
Sbjct: 147 EGVPVD--------NDG--MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMER 196

Query: 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263
            + + E A K  +++I D  Y+ + +     V +    +   VI  G++SK  +  G+R+
Sbjct: 197 RKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKV-LGTGFRI 255

Query: 264 GWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFF--SKIVDIL 321
           GW++      IL+++ +    K  ++         Q    +  K    + +     +   
Sbjct: 256 GWIIA--EGEILKKVLMQ---KQPIDF--CAPAISQYIALEYLKRGYFEKYHLEGALLGY 308

Query: 322 RDTADICYDRI-KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV 380
           ++  DI    +   +P      KP   MFVM  L     EG  D + FA +L + E V+V
Sbjct: 309 KEKRDIMLKALENHLPNAEF-TKPIAGMFVMFFLP----EGA-DGISFANELMEREGVVV 362

Query: 381 LPGMA----VGMKNWLRITFA-IEPSALEEGLGRI 410
           +PG         KN +R+ F+      +  G+ ++
Sbjct: 363 VPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL 397

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score =  146 bits (370), Expect = 1e-39
 Identities = 71/405 (17%), Positives = 134/405 (33%), Gaps = 50/405 (12%)

Query: 33  IIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE----FDCYSPSVGI 88
             K + ++N    II LG GD +  P        ADA+  A         +  Y    G 
Sbjct: 58  RRKAHQEKNPDAKIISLGIGDTT-EP---LPKYIADAMAKAAAGLATREGYSGYGAEQGQ 113

Query: 89  LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA 148
              R A+A             D+++++ G K  I  I  +       + +  P +P+Y  
Sbjct: 114 GALREAVASTFYGHAGRAA--DEIFISDGSKCDIARIQMMFG-SKPTVAVQDPSYPVYVD 170

Query: 149 NA----------RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN-PGNPCGN 197
            +                I +    P+  +  DL   +         ++    P NP G 
Sbjct: 171 TSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAK------RTDIIFFCSPNNPTGA 224

Query: 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTF-GSTPYVRMGVFGSTVPVITLGSMSKRW 256
             T  QL ++   ARK G +++ D  Y         P     + G+    I   S SK  
Sbjct: 225 AATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYA 284

Query: 257 IVPGWRLGW------LVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK 310
              G RLGW      L  ++   +  +   V +        +G +  VQ       +   
Sbjct: 285 GFTGVRLGWTVVPKALKYANGEPVHADWNRVMT-----TCFNGASNIVQAGGLACLQPEG 339

Query: 311 EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFAL 370
               + ++   ++ A I      E+   +     + + ++ V          S   +   
Sbjct: 340 LKEMNAMIKFYKENAQILKTTFTEMGF-SVY-GGDDAPYIWVGFP----GKPS--WDVFA 391

Query: 371 QLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413
           ++ +  +++  PG   G   + ++R +       + E + R K  
Sbjct: 392 EILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEA 436

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  144 bits (366), Expect = 2e-39
 Identities = 80/407 (19%), Positives = 158/407 (38%), Gaps = 49/407 (12%)

Query: 31  LTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILP 90
           L    Q +   +    +PL  G+P       T  V  DA+  ++   E + Y  + G+  
Sbjct: 17  LHEAMQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASL--HELEKYPLTAGLPE 70

Query: 91  ARRAIADYLNSELPC-KLSPDD-VYLTAGCKQAIQVILTVLARPGAN-----ILLPKPGF 143
            R+A A++L        +  D+ +    G ++A+   +  +  P ++     I+ P P +
Sbjct: 71  LRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFY 130

Query: 144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203
            +YE        EI HF   P   +  D   +     + T  + + +P NP G+V     
Sbjct: 131 QIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDG 189

Query: 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTP-----YVRMGVFGSTVPVITLGSMSKRWIV 258
            +++ +   K G ++ SDE Y  + F              +  S   ++   S+SKR  V
Sbjct: 190 WKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNV 249

Query: 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATF--VQGAVPQIFKNTKEDFFSK 316
           PG R G++   D   +L+   +    + Y     G A    VQ A   I     E     
Sbjct: 250 PGLRSGFVA-GDAE-LLKNFLL---YRTYH----GSAMSIPVQRAS--IAAWDDEQHVID 298

Query: 317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376
              + ++  +     ++++  +     P+ S ++ +K+         DD+ FA  L ++ 
Sbjct: 299 NRRLYQEKFERVIPILQQVFDVK---LPDASFYIWLKV------PDGDDLAFARNLWQKA 349

Query: 377 SVIVLPGMAVGM--------KNWLRITFAIEPSALEEGLGRIKAFCQ 415
           ++ VLPG  +          + ++RI    + +   +    I +  +
Sbjct: 350 AIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLYR 396

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  143 bits (362), Expect = 4e-39
 Identities = 62/397 (15%), Positives = 123/397 (30%), Gaps = 60/397 (15%)

Query: 43  PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPA------RRAIA 96
              ++ L HGDP+A+  +         V   +R  +   Y   +  L          AI 
Sbjct: 21  SDFVVNLDHGDPTAYEEYWRKMGDRCTVT--IRGCDLMSYFSDMTNLCWFLEPELEDAIK 78

Query: 97  DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA----NILLPKPGFPLYEANARH 152
           D              + +  G  Q  Q  +  L+        +++   P +  Y      
Sbjct: 79  DLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEET-- 136

Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
                     +    ++ + D       +     ++ +P NP G +      + +  +  
Sbjct: 137 --------TYVRSGMYKWEGD-AWGFDKKGPYIELVTSPNNPDGTI-----RETVVNRPD 182

Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTSDP 271
                VI D  Y    +  TP  R           I L + SK     G R+GW +  D 
Sbjct: 183 DDEAKVIHDFAYYWPHY--TPITRRQ------DHDIMLFTFSKITGHAGSRIGWALVKDK 234

Query: 272 SGILQELRIVDSIKGYLNISS-GPATFVQGAVPQIFK---------NTKEDFFSKIVDIL 321
                   +   +  Y+ ++S G +   Q    +I           +  E+FF    +++
Sbjct: 235 E-------VAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMM 287

Query: 322 RDTADICYDRIKEIPCITCPR-KPEGSMFVMVKLNLS---LLEGISDDMEFALQLAKEES 377
           ++  +   + +KE    T P+       +    L         G  ++ +   +L +   
Sbjct: 288 KNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSEL-RRHK 346

Query: 378 VIVLPGMAVGM-KNWLRITFAIEPSALEEGLGRIKAF 413
           V+   G   G  K  +R++           L R+   
Sbjct: 347 VMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLANM 383

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score =  143 bits (363), Expect = 9e-39
 Identities = 82/417 (19%), Positives = 152/417 (36%), Gaps = 56/417 (13%)

Query: 34  IKQNLKENDPRPIIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPA 91
           I++ LK    +  I  G G  DP  FP  +     A  +++         YS + G    
Sbjct: 33  IREILKFAADKDAISFGGGVPDPETFP-RKELAEIAKEIIEKEYHYTLQ-YSTTEGDPVL 90

Query: 92  RRAIADYLNSEL-PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPG-------F 143
           ++ I   L        L  D++  T G +QA+ +I  +     +  +L  P        F
Sbjct: 91  KQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAF 150

Query: 144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP---------GNP 194
             Y AN     LE        + G  +DL+ LE    E      I             NP
Sbjct: 151 RQYLANFVVVPLE--------DDG--MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNP 200

Query: 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254
            G   + ++ + + E A K  + ++ D+ Y  L +       +   G    V+ L + SK
Sbjct: 201 AGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSK 260

Query: 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-EDF 313
             + PG R+G +        ++++      K   ++ S           +  +     + 
Sbjct: 261 -VLAPGLRIGMVAG--SKEFIRKIVQ---AKQSADLCS--PAITHRLAARYLERYDLLEQ 312

Query: 314 FSKIVDILRDTADICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
               +++ R    +  + ++E    IP +    K EG +F+ + L     EG  D  E  
Sbjct: 313 LKPTIELYRRKRTVMLNALEEYFSDIPGVKW-VKSEGGLFIWLTLP----EGF-DTWEM- 365

Query: 370 LQLAKEESVIVLPGMA----VGMKNWLRITFA-IEPSALEEGLGRIKAFCQRHAKQQ 421
            + AK + V  +PG            +R++F       + EG+ R++     + K++
Sbjct: 366 FEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKEK 422

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score =  142 bits (360), Expect = 4e-38
 Identities = 94/431 (21%), Positives = 174/431 (40%), Gaps = 52/431 (12%)

Query: 3   SGAVKKKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHG--DPSAFPCF 60
            G  +         E   +   L +R++   +++ LK  +   II L  G  +P  FP  
Sbjct: 37  IGMEENIKSMLGDVERFFSKKALEMRASE--VRELLKLVETSDIISLAGGLPNPKTFPKE 94

Query: 61  RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120
               +  + +      A    Y  + G  P R  +  +L          +D+ +T+G +Q
Sbjct: 95  IIRDILVEIMEKYADKA-LQ-YGTTKGFTPLRETLMKWLGKRY-GISQDNDIMITSGSQQ 151

Query: 121 AIQVILTVLARPGANILLPKPGFP-------LYEANARHTRLEIRHFDLLPEKGWEVDLD 173
           A+ +I  V   PG  +++  P +         YE       L+        ++G  + ++
Sbjct: 152 ALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLD--------DEG--MKVE 201

Query: 174 GLEAL-----ADENTVAMVIVNP--GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226
            LE       +    V +V   P   NP G      + + + E A +   +V+ D+ Y  
Sbjct: 202 ILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGE 261

Query: 227 LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG 286
           L +   P  ++    +   VI LG+ SK  + PG+R+GW+V     GI++++ I    K 
Sbjct: 262 LRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMVG--DPGIIRKMEI---AKQ 315

Query: 287 YLNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRI-KEIPCITCPRKP 344
             ++ +    F Q    +       E    +I    +   D   + + + +P      KP
Sbjct: 316 STDLCT--NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKP 373

Query: 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA----VGMKNWLRITFA-IE 399
           EG MF+ V L     +GI D  +  L+ A ++ V  +PG A      +KN +R+ F  ++
Sbjct: 374 EGGMFIWVTLP----DGI-DSKKM-LERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVD 427

Query: 400 PSALEEGLGRI 410
              + EG+ R+
Sbjct: 428 EDKIMEGIKRL 438

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  134 bits (339), Expect = 2e-35
 Identities = 71/407 (17%), Positives = 140/407 (34%), Gaps = 54/407 (13%)

Query: 42  DPRP-IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL- 99
           + +        G  +     +    + DA+ + +   E   Y+P  GI   R      + 
Sbjct: 44  EAKSTTYNATIGMAT-NKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKML 102

Query: 100 --NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA---NARHTR 154
             N EL    +     +T      + ++  +       ILLP+  +  Y+          
Sbjct: 103 RDNPEL-SIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGAN 161

Query: 155 LEI-RHFDLLPEKGWEVDLDGLEAL---ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
           L+    FD    K      D L       +++ V M++  P NP G   T++++  I E 
Sbjct: 162 LQTYPIFD----KDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEA 217

Query: 211 ARKLG-----IMVISDEVYDHLTFGSTPYVRM-----GVFGSTVPVITLGSMSKRWIVPG 260
            + L      ++ + D+ Y  L +       +      +  + +  I L   +K +   G
Sbjct: 218 IKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWG 277

Query: 261 WRLGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKI- 317
           +R+G++         +E  +   +KG +  NISSGP    Q AV  + KN K+       
Sbjct: 278 FRVGFMTFGTSDQTTKE-VLEAKVKGLIRSNISSGP-LPTQSAVKHVLKNNKQFDKEIEQ 335

Query: 318 -VDILRDTADICYDRIKE------IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFAL 370
            +  L++  ++  + +                      F+ +K++        D      
Sbjct: 336 NIQTLKERYEVTKEVVYADQYHSHWQAYD----FNSGYFMAIKVH------DVDPEALRK 385

Query: 371 QLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQR 416
            L  + S+ V+   A      +RI F+ +E   +      I      
Sbjct: 386 HLIDKYSIGVIALNATD----IRIAFSCVEKDDIPHVFDSIAKAIDD 428

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score =  131 bits (331), Expect = 3e-34
 Identities = 88/428 (20%), Positives = 153/428 (35%), Gaps = 71/428 (16%)

Query: 26  TVRSALTIIKQNLKENDPRPIIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDC-- 81
            +R+   I+ +  K      +I L  G  +P+ FP         +               
Sbjct: 18  PIRTMTDILSRGPKS-----MISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRAL 72

Query: 82  -YSPSVGILPARRAIADYL-------NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG 133
            YSPS GI      +               P      D+ +T+G +Q +  +  ++  PG
Sbjct: 73  QYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPG 132

Query: 134 ANILLPKPGFP-------LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL-------- 178
            N+LL +P +            N  +   +        E G  +  D L  +        
Sbjct: 133 DNVLLDEPAYSGTLQSLHPLGCNIINVASD--------ESG--IVPDSLRDILSRWKPED 182

Query: 179 ---ADENTVAMVIVNP--GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP 233
                +NT   +   P   NP GN  T ++ ++I E ARK   ++I D+ Y  L F    
Sbjct: 183 AKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFR 242

Query: 234 YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSG 293
                       VI   S SK  I  G R+G+L    P  +++ + +         +   
Sbjct: 243 VPTFLSMDVDGRVIRADSFSKI-ISSGLRIGFLTGPKP--LIERVIL---HIQVSTL--H 294

Query: 294 PATFVQGAVPQIFKNTKEDFF----SKIVDILRDTADICYDRI-KEIPCITCPRKPEGSM 348
           P+TF Q  + Q+     E+ F     +++D   +  D       K +  +     P   M
Sbjct: 295 PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGM 354

Query: 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA-----VGMKNWLRITFA-IEPSA 402
           F+ +K+      GI+D  E   + A +  V++LPG A          +LR +F+   P  
Sbjct: 355 FLWIKVK-----GINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQ 409

Query: 403 LEEGLGRI 410
           ++     +
Sbjct: 410 MDVAFQVL 417

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score =  127 bits (322), Expect = 4e-33
 Identities = 65/429 (15%), Positives = 128/429 (29%), Gaps = 74/429 (17%)

Query: 28  RSALTIIKQNLKENDPRPI-IPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDC--Y 82
           R AL + +Q  +    R + + +  G    + F    +  +      + VR    D   Y
Sbjct: 8   RPALDLARQAYEAFKARGLNLNMQRGQPADADFD--LSNGLLTVLGAEDVRMDGLDLRNY 65

Query: 83  S-PSVGILPARRAIADYLNSELPC-------KLSPDDVYLTAGCKQAIQVILTVLARPGA 134
                G+  AR   A YL+ +           L    + LT      ++           
Sbjct: 66  PGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTP 125

Query: 135 NILLPKPGFP-------LYEANARHTRLEIRHFDLLPEKGWEVDLDGLE-ALADENTVAM 186
            +++  PG+                  ++          G   D+D +E     + +V  
Sbjct: 126 KMIVTVPGYDRHFLLLQTLGFELLTVDMQ--------SDG--PDVDAVERLAGTDPSVKG 175

Query: 187 VIVNP--GNPCGNVFTYQQLQKIAE-KARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243
           ++  P   NP G   + ++ +++A  +A      + +D+ Y               F   
Sbjct: 176 ILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVL 235

Query: 244 VP-------VITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPA 295
                         S SK  I   G  LG++ +S+    ++ L       G  +I  GP 
Sbjct: 236 ARDAGYPDRAFVFASTSK--ITFAGAGLGFVASSED--NIRWLSKY---LGAQSI--GPN 286

Query: 296 TFVQGAVPQIFKNTK---EDFFSKIVDILRDTADICYD----RIKEIPCITCPRKPEGSM 348
              Q    +         E        I+        +     + E         P+G  
Sbjct: 287 KVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGY 346

Query: 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA------VGMKNWLRITFA-IEPS 401
           F+ +       E ++D +   ++LA+   V + P  A            LR+        
Sbjct: 347 FISLD----TAEPVADRV---VKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVE 399

Query: 402 ALEEGLGRI 410
            +   +  +
Sbjct: 400 EVRTAMQVV 408

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score =  121 bits (306), Expect = 7e-31
 Identities = 64/412 (15%), Positives = 112/412 (27%), Gaps = 80/412 (19%)

Query: 46  IIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVGILPARRAIADYLNS 101
            + L  G         F    +A     D   +   D   Y    GI+  R+  AD L  
Sbjct: 35  KLDLTRGKPSSEQLD-FADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLGV 93

Query: 102 ELPCKLSPDDVYLTAGCKQAI--------------QVILTVLARPGANILLPKPG----- 142
                   + V         I                +           + P PG     
Sbjct: 94  P------VEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF 147

Query: 143 --FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP--GNPCGNV 198
                +        +         E G   D+D +E L     V  + V P   NP G  
Sbjct: 148 SITERFGFEMISVPMN--------EDG--PDMDAVEELVKNPQVKGMWVVPVFSNPTGFT 197

Query: 199 FTYQQLQKIAE-KARKLGIMVISDEVYDHLTFGSTPYVRMGVF------GSTVPVITLGS 251
            T    ++++  +       V+ D  Y   T        + +       G+        S
Sbjct: 198 VTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTS 257

Query: 252 MSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK 310
            SK  I   G  + + +TS      +         G   I  GP    Q A  + F + +
Sbjct: 258 TSK--ITLAGAGVSFFLTSAE--NRKWYTGH---AGIRGI--GPNKVNQLAHARYFGDAE 308

Query: 311 --EDFFSKIVDILRDTADICYDRI-KEIPCITCPR--KPEGSMFVMVKLNLSLLEGISDD 365
                  K    L    +   + +   +      +   P G  F+ +     ++ G +  
Sbjct: 309 GVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLD----VVPGTASR 364

Query: 366 MEFALQLAKEESVIVLPGMA------VGMKNWLRITFA-IEPSALEEGLGRI 410
           +    +LAKE  + +    +            LR+  +      LE  +  +
Sbjct: 365 V---AELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGV 413

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score =  120 bits (304), Expect = 1e-30
 Identities = 66/412 (16%), Positives = 118/412 (28%), Gaps = 81/412 (19%)

Query: 46  IIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVGILPARRAIADYLNS 101
            + L  G           +  + +    D       DC  Y   +GI   R   A+ L  
Sbjct: 34  SLDLTRGKPSAEQLD--LSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALG- 90

Query: 102 ELPCKLSPDDVYLTAGCKQAI--QVILTVL------------ARPGANILLPKPG----- 142
                L  D V    G    I   +I                A      L P PG     
Sbjct: 91  -----LPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF 145

Query: 143 --FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP--GNPCGNV 198
                +     +  +         ++G   D+  +  L  +  V  +   P  GNP G  
Sbjct: 146 TITEHFGFEMINVPMT--------DEG--PDMGVVRELVKDPQVKGMWTVPVFGNPTGVT 195

Query: 199 FTYQQLQKIAEKARK-LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP------VITLGS 251
           F+ Q  +++AE +       ++ D  Y   T      +   V               + S
Sbjct: 196 FSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSS 255

Query: 252 MSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK 310
            SK  I   G  + +  +S     ++             I  GP    Q A  Q F +  
Sbjct: 256 TSK--ITHAGSGVSFFASSKE--NIEWYAS---HANVRGI--GPNKLNQLAHAQFFGDVA 306

Query: 311 --EDFFSKIVDILRDTADICYDRI-KEIPCITCPR--KPEGSMFVMVKLNLSLLEGISDD 365
             +    K    L    +   + +   +      +   P G  F+ V     ++ G +  
Sbjct: 307 GLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVD----VVPGTASR 362

Query: 366 MEFALQLAKEESVIVLPGMAV------GMKNWLRITFA-IEPSALEEGLGRI 410
           +   ++LAKE  + +    +            +R+  +    + LE  +   
Sbjct: 363 V---VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGF 411

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score =  108 bits (272), Expect = 2e-26
 Identities = 61/343 (17%), Positives = 127/343 (37%), Gaps = 58/343 (16%)

Query: 68  DAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVI 125
            +V  A+       + Y P        +A+A +        +    +    G  ++I  +
Sbjct: 40  VSVKRALIDNLDCIERY-PDADYFHLHQALARHHQ------VPASWILAGNGETESIFTV 92

Query: 126 LTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185
                      ++  PGF  Y      +  EIR + L    GW++    LEAL  +  + 
Sbjct: 93  --ASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPD--LD 148

Query: 186 MVIV-NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT---FGSTPYVRMGVFG 241
            + +  P NP G +     LQ IA++ + L I +I DE +        G  P ++     
Sbjct: 149 CLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALK----- 203

Query: 242 STVP-VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL---NISSGPATF 297
              P +  L S++K + +PG RLG+LV SD          +  ++      +++      
Sbjct: 204 -DNPHIWVLRSLTKFYAIPGLRLGYLVNSDD-------AAMARMRRQQMPWSVN----AL 251

Query: 298 VQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357
              A     ++    +       LR+     Y  + ++P +T       + +++++    
Sbjct: 252 AALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-VYPGRAN-YLLLRCE-- 305

Query: 358 LLEGISDDMEFALQLAKEESVIV-----LPGMAVGMKNWLRIT 395
                 +D++   +L   + +++      PG+      + R+ 
Sbjct: 306 -----REDIDLQRRLLT-QRILIRSCANYPGLD---SRYYRVA 339

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score =  106 bits (266), Expect = 1e-25
 Identities = 58/319 (18%), Positives = 120/319 (37%), Gaps = 60/319 (18%)

Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
            ++I +YL       L    + L  G   A ++I  +       IL+  P +  YE NA+
Sbjct: 67  NKSIENYLK------LKDIGIVLGNG---ASEII-ELSISLFEKILIIVPSYAEYEINAK 116

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
              + +    L  ++   +D + + +  D+    ++I NP NP G +   ++   + + A
Sbjct: 117 KHGVSVVFSYL--DENMCIDYEDIISKIDDVDS-VIIGNPNNPNGGLINKEKFIHVLKLA 173

Query: 212 RKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-------VITLGSMSKRWIVPGWRLG 264
            +    +I DE +    F   P        S V        +  + +M+K + +PG R G
Sbjct: 174 EEKKKTIIIDEAFIE--FTGDPSS------SFVGEIKNYSCLFIIRAMTKFFAMPGIRFG 225

Query: 265 WLVTSDPSGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321
           + +T++         I   IK      NI+     F + A     K+   ++  + +  +
Sbjct: 226 YGITNNK-------EIAAKIKAKQNPWNINC----FAEMAAINCLKD--TNYIEESLLWI 272

Query: 322 RDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV- 380
           +       + + +I  I     P  + FV+ +L            +    L K E +++ 
Sbjct: 273 KKERKRFIEELNKIGFIKRVFSPHAN-FVLCRL------ENISGEKLYDSLLK-EDIVIR 324

Query: 381 ----LPGMAVGMKNWLRIT 395
                 G+     +++R  
Sbjct: 325 RCCNFIGLD---DSFVRFA 340

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score =  100 bits (252), Expect = 8e-24
 Identities = 65/337 (19%), Positives = 125/337 (37%), Gaps = 40/337 (11%)

Query: 64  PVAADAVVDAVRSAEFDC--YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121
                 +V  V     +   Y P    +  R  +A Y+  +    ++ D+++   G  + 
Sbjct: 46  EALVADLVATVDKIATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEI 104

Query: 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG-LEALAD 180
           +Q +L     PG   L  +P + ++   A+ T  E        +  + +D+D  LE +  
Sbjct: 105 LQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGAD--FRIDMDVALEEIRA 162

Query: 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240
           +    + +  P NP G+V +   +++I   A  +   VI DE Y    F  +P     + 
Sbjct: 163 KQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGI---VIVDEAYAE--FSPSPSATTLLE 217

Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQG 300
                ++   +MSK +   G RLG+ V ++P+  +  + +V   +   ++S+      Q 
Sbjct: 218 KYPTKLVVSRTMSKAFDFAGGRLGYFV-ANPA-FIDAVMLV---RLPYHLSA----LSQA 268

Query: 301 AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM--FVMVKLNLSL 358
           A     ++         V+ L         R++E+     P     S   FV        
Sbjct: 269 AAIVALRH--SADTLGTVEKLSVERVRVAARLEELGYAVVP-----SESNFVFFGDF--- 318

Query: 359 LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395
               SD          +  V++     VG+   LR T
Sbjct: 319 ----SDQHAAWQAF-LDRGVLIRD---VGIAGHLRTT 347

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score =  100 bits (252), Expect = 1e-23
 Identities = 80/363 (22%), Positives = 132/363 (36%), Gaps = 51/363 (14%)

Query: 33  IIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPAR 92
           I K +  EN      PLG    S           A    ++  S E + Y P       R
Sbjct: 34  ITKLSSNEN------PLG---TS--------KKVAAIQANS--SVETEIY-PDGWASSLR 73

Query: 93  RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
           + +AD+        L  +++  TAG  + I+++  VL     N ++  P F  Y  NA  
Sbjct: 74  KEVADFYQ------LEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALI 127

Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
              E+R   L   +  E DL+G+    DE T  + I NP NP GN      +Q   ++  
Sbjct: 128 EGAEVREIPL--LQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVP 185

Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272
              ++V+ DE Y        P     +  +   +I   + SK + +   R+G+ +     
Sbjct: 186 S-DVLVVLDEAYIEYV-TPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKE- 242

Query: 273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
            I+++L IV   +   N +S      Q    +  K+  + F  +      +         
Sbjct: 243 -IIRQLNIV---RPPFNTTS-IG---QKLAIEAIKD--QAFIGECRTSNANGIKQYEAFA 292

Query: 333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392
           K    +     P    FV++ L         +       L K    I   G A+G    +
Sbjct: 293 KRFEKVKLY--PANGNFVLIDLG-------IEAGTIFSYLEKN-GYITRSGAALGFPTAV 342

Query: 393 RIT 395
           RIT
Sbjct: 343 RIT 345

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score =  100 bits (251), Expect = 2e-23
 Identities = 72/376 (19%), Positives = 145/376 (38%), Gaps = 54/376 (14%)

Query: 60  FRTTPVAADAVVDAVRSAEF---DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116
           F T P   +A+   +    F      +          AIA + +++    +    V    
Sbjct: 40  FATAPCIIEALNQRLMHGVFGYSRWKNDEF-----LAAIAHWFSTQHYTAIDSQTVVYGP 94

Query: 117 GCKQAIQVILTVLARPGANILLPKPGF-PLYEANARHTRLEIRHFDLLPEKG-WEVDLDG 174
                +  ++   +  G  +++  P +   Y+A     +  +    L  +   W  D+  
Sbjct: 95  SVIYMVSELIRQWSETGEGVVIHTPAYDAFYKA-IEGNQRTVMPVALEKQADGWFCDMGK 153

Query: 175 LEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP 233
           LEA LA      M++ +P NP G V+T  +L+ +A+   + G+ VISDE++  + +G  P
Sbjct: 154 LEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQP 213

Query: 234 YVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR--IVDSIKGYLN 289
           ++    + +        L S SK + +P     + +  +        R   + ++KG   
Sbjct: 214 HI---PWSNVARGDWALLTSGSKSFNIPALTGAYGIIENS-----SSRDAYLSALKGRDG 265

Query: 290 ISSG-----PAT---FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITC 340
           +SS       A    + QG            +   +   L+D      D++    P +  
Sbjct: 266 LSSPSVLALTAHIAAYQQG----------APWLDALRIYLKDNLTYIADKMNAAFPELN- 314

Query: 341 PRKPEGS--MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITF 396
            + P+ +   +    L+L  L  I D+      L ++E V ++PG   G   + ++R+  
Sbjct: 315 WQIPQSTYLAW----LDLRPL-NIDDN-ALQKALIEQEKVAIMPGYTYGEEGRGFVRLNA 368

Query: 397 AIEPSALEEGLGRIKA 412
               S LE+G+  +  
Sbjct: 369 GCPRSKLEKGVAGLIN 384

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score =  100 bits (251), Expect = 2e-23
 Identities = 68/339 (20%), Positives = 131/339 (38%), Gaps = 45/339 (13%)

Query: 94  AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEANARH 152
           A+ D+   E    +  +D+    G   AI + L   +  G  +L+  P + P      R 
Sbjct: 104 AVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFART-IRL 162

Query: 153 TRLEIRHFDLLPEKG-WEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
               +    L    G +E+D + LE  + D N    ++ +P NP G V+    L KIAE 
Sbjct: 163 NDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAEL 222

Query: 211 ARKLGIMVISDEVYDH--LTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWL 266
            +K G++++SDE+  H  L      +  +    ++     I L S +K + + G +  + 
Sbjct: 223 CKKHGVILVSDEI--HQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA 280

Query: 267 VTSDPSGILQELR--IVDSIKGY----LNISSGPAT---FVQGAVPQIFKNTKEDFFSKI 317
           +  +       LR              +      AT   F  G          + +  ++
Sbjct: 281 IIQNE-----SLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG----------KPWLEEL 325

Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGS--MFVMVKLNLSLLEGISDDMEFALQLAKE 375
             ++     +    ++    I    +PEG+  ++    L+ S    I+   + + +L  E
Sbjct: 326 KTVIEGNIKLVIKELEAKTKIK-VMEPEGTYLVW----LDFSAY-AIAQP-QLSEKLQNE 378

Query: 376 ESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412
             V++  G   G   K + R+  A   + ++E L RI +
Sbjct: 379 AKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIIS 417

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 99.5 bits (249), Expect = 2e-23
 Identities = 69/374 (18%), Positives = 134/374 (35%), Gaps = 58/374 (15%)

Query: 60  FRTTPVAADAVVDAVR------SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVY 113
           F T P    A+ DAV+        +              +A A++       +  P+ ++
Sbjct: 35  FSTCPAVLQAITDAVQREAFGYQPDGSLL---------SQATAEFYADRYGYQARPEWIF 85

Query: 114 LTAGCKQAIQVILTVLARPGANILLPKPG-FPLYEANARHTRLEIRHFDLLPEKGWEVDL 172
                 + + + +       + +++P P   P +      T+ E    D        ++L
Sbjct: 86  PIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHL-LSATQREGIFIDA----TGGINL 140

Query: 173 DGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS- 231
             +E        ++++ NP NP G VF  + L ++ + A +    V+ DE++  L F   
Sbjct: 141 HDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQ 200

Query: 232 -TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR-----IVDSIK 285
            T    +    ++V  IT+ + SK W + G +   ++ S+P             +   IK
Sbjct: 201 HTVAAGVSDTAASV-CITITAPSKAWNIAGLKCAQIIFSNP-----SDAEHWQQLSPVIK 254

Query: 286 GYLNISSGPAT---FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCP 341
              +     A    +  G           DF ++ V  L++  D     I + IP     
Sbjct: 255 DGASTLGLIAAEAAYRYG----------TDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-I 303

Query: 342 RKPEGSMFVMVKLNLSLLEGISDD-MEFALQLAKEESVIVLPGMAVGM--KNWLRITFAI 398
              + +  +   ++      I     EF ++ AK   V +  G   G     + R+ FA 
Sbjct: 304 TPMQATYLMW--IDFRDT-TIEGSPSEFFIEKAK---VAMNDGAWFGEDGTGFCRLNFAT 357

Query: 399 EPSALEEGLGRIKA 412
               LEE + R+  
Sbjct: 358 SREVLEEAIDRMAK 371

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 98.4 bits (246), Expect = 9e-23
 Identities = 61/347 (17%), Positives = 122/347 (35%), Gaps = 42/347 (12%)

Query: 94  AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEANARH 152
            +  ++       +  D +  TAG   A+   +    +PG  +++  P + P + A  ++
Sbjct: 74  TVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMA-IKN 132

Query: 153 TRLEIRHFDLLPEKG-WEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
              +I   +LL + G + +D   LE    D+N  A++  +P NP G V+   +LQKI + 
Sbjct: 133 QERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDI 192

Query: 211 ARKLGIMVISDEVYDH--LTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWL 266
             K  +M+ SDE+  H  L      +         +    IT  + SK + + G  +  +
Sbjct: 193 VLKSDLMLWSDEI--HFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI 250

Query: 267 VTSDPSGILQELR--IVDSIKGY----LNISSGPAT---FVQGAVPQIFKNTKEDFFSKI 317
           +  +P     ++R     S               A    + +             +    
Sbjct: 251 IIKNP-----DIRERFTKSRDATSGMPFTTLGYKACEICYKEC----------GKWLDGC 295

Query: 318 VDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376
           + ++     I  D  +   P I      EG+      ++   L  +         +  + 
Sbjct: 296 IKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQW--IDFRAL-KMDHK-AMEEFMIHKA 350

Query: 377 SVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421
            +    G   G     + RI  A   S ++E L R+    +    + 
Sbjct: 351 QIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKNRH 397

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 98.3 bits (246), Expect = 9e-23
 Identities = 67/336 (19%), Positives = 135/336 (40%), Gaps = 38/336 (11%)

Query: 94  AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEANARH 152
           A+ D+  SE       +D+    G   AI + +    + G  +L+  P + P   +  R 
Sbjct: 74  AVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARS-VRL 132

Query: 153 TRLEIRHFDLLPEKG-WEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
              ++    L  E G +++D + LE  + + +    ++ NP NP G V+  + L++I   
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192

Query: 211 ARKLGIMVISDEVYDH--LTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRL 263
            +K  ++++SDE+  H  LT     +V    F +  P      + L S +K + + G + 
Sbjct: 193 CQKHHVILVSDEI--HQDLTLFGHEHV---SFNTVSPDFKDFALVLSSATKTFNIAGTKN 247

Query: 264 GWLVTSDPSGILQELRIVDSIKGYLNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321
            + +  +P      L      K    ++     ++    A    ++   + +   +  +L
Sbjct: 248 SYAIIENP-----TLC--AQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVL 299

Query: 322 RDTADICYDRIKE-IPCITCPRKPEGS--MFVMVKLNLSLLEGISDDMEFALQLAKEESV 378
            +      +   +  P +    KP+G+  ++    L+ S   G++DD      L  +  V
Sbjct: 300 EENIQFAVEYFAQEAPRLK-VMKPQGTYLIW----LDFSDY-GLTDD-ALFTLLHDQAKV 352

Query: 379 IVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412
           I+  G   G   +   R+  A   S +EE   RI  
Sbjct: 353 ILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVC 388

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score = 97.3 bits (243), Expect = 1e-22
 Identities = 72/375 (19%), Positives = 124/375 (33%), Gaps = 73/375 (19%)

Query: 33  IIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPAR 92
            I+ N  EN      PLG    S        P A  A  DAV  A    Y     IL   
Sbjct: 18  PIRINFNEN------PLG---MS--------PKAQAAARDAVVKANR--Y-AKNEILMLG 57

Query: 93  RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
             +A +        +    + LTAG  + I+  +   A   A +++P+  +   E  A+ 
Sbjct: 58  NKLAAHHQ------VEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKI 111

Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVA-MVIV-NPGNPCGNVFTYQQLQKIAEK 210
             +++    +     W  D++GL+A     +   +V + NP NP G +     ++     
Sbjct: 112 AGMKVTKVKM--LDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIAS 169

Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--------VITLGSMSKRWIVPGWR 262
                 M I DE Y         +V    F S  P        +I L + SK   + G R
Sbjct: 170 KPA-NTMFIVDEAYAE-------FVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMR 221

Query: 263 LGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR 322
           +G+ V      ++  +           I+         A      +    F +       
Sbjct: 222 VGYAVAHPT--VIALMGRY---VAGEKINF-SG---VDAALASMND--SAFITYSKKSND 270

Query: 323 DTADICYDRIKEIPCITCPRKPEGSM--FVMVKLNLSLLEGISDDMEFALQLAKEESVIV 380
            +  I    ++++     P     S   FV  +L            ++   +A +  V++
Sbjct: 271 VSRQILLKALEDLKLPYLP-----SEGNFVFHQLV-------VPLKDYQTHMA-DAGVLI 317

Query: 381 LPGMAVGMKNWLRIT 395
                    NW RI+
Sbjct: 318 GRAFP-PADNWCRIS 331

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score = 96.9 bits (242), Expect = 2e-22
 Identities = 58/312 (18%), Positives = 112/312 (35%), Gaps = 46/312 (14%)

Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA-NILLPKPGFPLYEANA 150
               A Y        + P+ V ++ G  + I++++     PG   IL   P + +Y  +A
Sbjct: 64  IENYAQYAG------VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA 117

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
               +E R    L    W++DL G+     +    + + +P NP G +   Q  + + E 
Sbjct: 118 ETIGVECRTVPTLD--NWQLDLQGISD-KLDGVKVVYVCSPNNPTGQLINPQDFRTLLEL 174

Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP----VITLGSMSKRWIVPGWRLGWL 266
            R   I+V  DE Y         +         +     +  L ++SK + + G R G+ 
Sbjct: 175 TRGKAIVVA-DEAY-------IEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFT 226

Query: 267 VTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD 326
           + ++   ++  L  V  I  Y  +S+     V     Q           + V  +    +
Sbjct: 227 LANEE--VINLLMKV--IAPY-PLST----PVADIAAQALSPQGIVAMRERVAQIIAERE 277

Query: 327 ICYDRIKEIPCITCPRKPEGSM--FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP-G 383
                +KEIPC+    +   S   +++ +                  L  ++ +I+    
Sbjct: 278 YLIAALKEIPCV---EQVFDSETNYILAR--------FKASSAVFKSLW-DQGIILRDQN 325

Query: 384 MAVGMKNWLRIT 395
               +   LRIT
Sbjct: 326 KQPSLSGCLRIT 337

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 97.2 bits (243), Expect = 2e-22
 Identities = 68/333 (20%), Positives = 132/333 (39%), Gaps = 32/333 (9%)

Query: 94  AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEANARH 152
           A+AD+   E   +   D     +G   AI  ++     PG  IL+ +P +   Y      
Sbjct: 70  AVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSV-IEG 128

Query: 153 TRLEIRHFDLLPEKG-WEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
               +   DL+ E   + V+   LE  LA  +   MV  NP NP G  ++ +++++IAE 
Sbjct: 129 NGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAEL 188

Query: 211 ARKLGIMVISDEVYDH--LTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWL 266
             K  +++ISDE+  H  L                    V++L S SK + +        
Sbjct: 189 CAKHQVLLISDEI--HGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACA 246

Query: 267 VTSDPSGILQELRIVDSIKGYLNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324
           +  +P     +LR     +    ++    P      A    ++    D+  ++  +LRD 
Sbjct: 247 IIPNP-----DLR--ARAEESFFLAGIGEPNLLAIPAAIAAYEEG-HDWLRELKQVLRDN 298

Query: 325 ADICYDRIKE-IPCITCPRKPEGS--MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL 381
                + + + +P +        S   +    +++S L G++ + +F   L ++  +I+ 
Sbjct: 299 FAYAREFLAKEVPEVK-VLDSNASYLAW----VDISAL-GMNAE-DFCKYLREKTGLIIS 351

Query: 382 PGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412
            G         ++RI  A     + +G+ R+K 
Sbjct: 352 AGNGYRGNGHEFVRINLACPKELVIDGMQRLKQ 384

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score = 93.0 bits (232), Expect = 4e-21
 Identities = 43/312 (13%), Positives = 104/312 (33%), Gaps = 54/312 (17%)

Query: 92  RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
           R+ +A   +      +  + + +T G   A   I    A  G+  L+  P F  YE   R
Sbjct: 56  RQMLAKRNS------VDNNAILVTNGPTAAFYQI--AQAFRGSRSLIAIPSFAEYEDACR 107

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
               E+  +    +         +      N     + NP NP G +    ++ ++    
Sbjct: 108 MYEHEVCFYPSNED---------IGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDH 158

Query: 212 RKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
                  + D+ Y  ++F +   +R         ++ + S S  + +PG R+G++V +  
Sbjct: 159 P--DTTFVLDQSY--VSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKD 214

Query: 272 SGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC 328
                    +  +  +     ++         A   I  +     F+  +   +      
Sbjct: 215 --------FMKRVAAFSTPWAVN----ALAIEAAKFILIH--PAQFTLPIRKWQRNTVDF 260

Query: 329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV-----LPG 383
              +  +  +        + F +++L            E    + +E ++++       G
Sbjct: 261 ITALNRLDGVE-VHPSGTT-FFLLRL------KKGTAAELKKYMLEEYNMLIRDASNFRG 312

Query: 384 MAVGMKNWLRIT 395
           +    ++++RIT
Sbjct: 313 LD---ESYVRIT 321

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 93.4 bits (233), Expect = 4e-21
 Identities = 73/338 (21%), Positives = 141/338 (41%), Gaps = 43/338 (12%)

Query: 94  AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEANARH 152
           +I ++L      K+  + +  + G   AI +++  L +    I++ +P + P      ++
Sbjct: 75  SIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSV-VKN 133

Query: 153 TRLEIRHFDLLPEKG--WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
              E+    L   +   + +D + +E    +  +  ++ NP NP G V+T  +L+K+ + 
Sbjct: 134 NNRELIISPLQKLENGNYIMDYEDIENKIKDVKL-FILCNPHNPVGRVWTKDELKKLGDI 192

Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVT 268
             K  + +ISDE++  +      ++ M           IT  + +K + + G +  ++V 
Sbjct: 193 CLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVL 252

Query: 269 SDPSGILQELR--IVDSIKGY----LNISSGPAT---FVQGAVPQIFKNTKEDFFSKIVD 319
            D      +    + D+         N  S  AT   +  G          E +    ++
Sbjct: 253 PDE-----KDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG----------ESWLESFLE 297

Query: 320 ILRDTADICYDRIKE-IPCITCPRKPEGS--MFVMVKLNLSLLEGISDDMEFALQLAKEE 376
            L    D     I E +P +   RKPEG+  ++    ++ S L G+SD+ E    L ++ 
Sbjct: 298 YLESNIDFAIKYINENMPKLK-VRKPEGTYLLW----VDFSAL-GLSDE-ELESILVQKG 350

Query: 377 SVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412
            V +  G + G+    + RI  A   S LEE L RIK 
Sbjct: 351 KVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKN 388

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 92.6 bits (231), Expect = 5e-21
 Identities = 63/348 (18%), Positives = 124/348 (35%), Gaps = 54/348 (15%)

Query: 60  FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119
           +R  P     +   +     + Y P       R  + + +        +  +V L  G  
Sbjct: 42  YRLPPALRSELAARLGEVALNRY-PVPSSEALRAKLKEVMQVP-----AGMEVLLGNGSD 95

Query: 120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG-LEAL 178
           + I ++    ARPGA ++ P PGF +Y  +A+   LE     L     + +D    L A+
Sbjct: 96  EIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAM 153

Query: 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA--RKLGIMVISDEVYDHLTFGSTPYVR 236
           A+     + +  P NP GN+F    ++ I   A       +V+ DE Y        P+ +
Sbjct: 154 AEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAY-------QPFAQ 206

Query: 237 MGVFGSTVP-------VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN 289
                S +        ++ + ++SK   + G RLG++        L++L  V   +   N
Sbjct: 207 ----ESWMSRLTDFGNLLVMRTVSK-LGLAGIRLGYVAGD--PQWLEQLDKV---RPPYN 256

Query: 290 ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF 349
           ++       +       ++       +    LR       + +     +T    P  + F
Sbjct: 257 VNV----LTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVF--PSAANF 308

Query: 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIV--LPGMAVGMKNWLRIT 395
           ++ ++          D            V++  +  M   + N LR+T
Sbjct: 309 LLARV---------PDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVT 347

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score = 86.1 bits (214), Expect = 1e-18
 Identities = 50/361 (13%), Positives = 115/361 (31%), Gaps = 68/361 (18%)

Query: 48  PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKL 107
           P G             P A + +     + +   Y P   ++  +  +A          +
Sbjct: 41  PFG---TP--------PKAIECLRQN--ANKAHLY-PDDSMIELKSTLAQKYK------V 80

Query: 108 SPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG 167
             +++ + AG  Q I+  +          L     F +YE  A+    +           
Sbjct: 81  QNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYK---TQSIT 137

Query: 168 WEV-DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226
             + +   L     +    + +  P NP G      +  +  +   +   +V+ D  Y+ 
Sbjct: 138 HNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNE-DCLVVIDAAYNE 196

Query: 227 LTFGSTPYVRMGVFGSTV----------PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276
                  +         +           V+ LG+ SK + + G R+G+ + +    I+ 
Sbjct: 197 -------FASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANAN--IIS 247

Query: 277 ELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336
               +   +   N+S+  A     A      +  ++F  K ++      ++  +  K+  
Sbjct: 248 AFYKL---RAPFNVSN-LA---LKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKHN 298

Query: 337 CITCPRKPEGSM--FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI 394
                     S   F+             +  + + +L K + +I+    + G+ N +RI
Sbjct: 299 IKIID-----SYTNFITYFF------DEKNSTDLSEKLLK-KGIIIRNLKSYGL-NAIRI 345

Query: 395 T 395
           T
Sbjct: 346 T 346

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score = 82.2 bits (204), Expect = 2e-17
 Identities = 61/365 (16%), Positives = 112/365 (30%), Gaps = 68/365 (18%)

Query: 33  IIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPAR 92
            +     EN      P               P    A+  A   A  + Y P        
Sbjct: 18  AVCLAFNEN------PEA---VE--------PRVQAAIAAAA--ARINRY-PFDAEPRVM 57

Query: 93  RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
           R +A++ +         D++ L  G  +    I           +   PGF  Y A    
Sbjct: 58  RKLAEHFS------CPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAV 109

Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
           + L      L       +D + L          +V+ NP NP G   +  +L ++ +   
Sbjct: 110 SGLRHFEIGL--TDDLLLDPNDL--AQVSRDDCVVLANPSNPTGQALSAGELDQLRQ--- 162

Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272
           + G ++I DE Y    + S     +         +   S SK + + G RLG L    PS
Sbjct: 163 RAGKLLI-DETYVD--YSSFRARGLAYGE---NELVFRSFSKSYGLAGLRLGALFG--PS 214

Query: 273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
            ++  ++     + + N+ +        A+     N  +      +           D +
Sbjct: 215 ELIAAMKRK---QWFCNVGT-LD---LHALEAALDN--DRAREAHIAKTLAQRRRVADAL 265

Query: 333 KEIPCITCPRKPEGSM--FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN 390
           + +           S   FV+V+         +        L  E  + V      G+ +
Sbjct: 266 RGLGYRVAS-----SEANFVLVEN--------AAGERTLRFLR-ERGIQVKDAGQFGLHH 311

Query: 391 WLRIT 395
            +RI+
Sbjct: 312 HIRIS 316

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 80.7 bits (200), Expect = 6e-17
 Identities = 59/368 (16%), Positives = 113/368 (30%), Gaps = 66/368 (17%)

Query: 33  IIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVGILP 90
            IK N  EN      P     PS        P    A+++ +         Y PS     
Sbjct: 28  WIKLNTNEN------PYP---PS--------PEVVKAILEELGPDGAALRIY-PSASSQK 69

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
            R    +           P  + +  G  + +  ++   A  G  I    P +  Y   A
Sbjct: 70  LREVAGELYG------FDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLA 123

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
                 +R F L        D                +  P  P G  F  + + ++A +
Sbjct: 124 EVQGARVRTFGL------TGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARR 177

Query: 211 ARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269
              +   ++ DE Y +     +   VR         V+   ++SK + + G R+G  +  
Sbjct: 178 CAGM---LVLDETYAEFAESNALELVR-----RHENVVVTRTLSKSYSLAGMRIGLAIA- 228

Query: 270 DPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329
               ++  L  +   + + N+    A   Q A     ++  + + S+    +R+T +   
Sbjct: 229 -RPEVIAALDKI---RDHYNLDR-LA---QAACVAALRD--QAYLSECCRRIRETREWFT 278

Query: 330 DRIKEIPCITCPRKPEGSM--FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
             ++ I     P     S   ++             D       L     V+V       
Sbjct: 279 TELRSIGYDVIP-----SQGNYLFATP------PDRDGKRVYDGL-YARKVLVRHFSDPL 326

Query: 388 MKNWLRIT 395
           + + +RI+
Sbjct: 327 LAHGMRIS 334

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 77.6 bits (192), Expect = 6e-16
 Identities = 58/343 (16%), Positives = 109/343 (31%), Gaps = 71/343 (20%)

Query: 64  PVAADAVVDAVRSAEFDCY-SPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122
               D V   + S     Y       L     I  YL+++    LS ++V +  G  + I
Sbjct: 35  EDLVDEVFRRLNSDALRIYYDSPDEEL--IEKILSYLDTD---FLSKNNVSVGNGADEII 89

Query: 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN 182
            V++          +   P +  Y   A+    +     L        DL  +  +    
Sbjct: 90  YVMM----LMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK------DLR-IPEVNVGE 138

Query: 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242
              + I NP NP G+VF  +++++I +        V  DE Y    F            S
Sbjct: 139 GDVVFIPNPNNPTGHVFEREEIERILKTG----AFVALDEAYYE--FHGE---------S 183

Query: 243 TVP-------VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV-DSIKGYLNISSGP 294
            V        +  + + SK + +   R+G++V S     +     V      + N+S   
Sbjct: 184 YVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--EKFIDAYNRVRLP---F-NVSY-- 235

Query: 295 ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM--FVMV 352
               Q        +   + F +    + +  +     ++E+           S   FV V
Sbjct: 236 --VSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITD-----SRGNFVFV 286

Query: 353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395
            +         +       L + ++V V        +  +RIT
Sbjct: 287 FM------EKEEKERLLEHL-RTKNVAVRS-----FREGVRIT 317

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus} Length = 412

 Score = 53.3 bits (129), Expect = 6e-08
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 13/77 (16%)

Query: 163 LPEKGWEV-----DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIM 217
           L   G  V     + + +       T A+ +    NP   V     L+ +A  A + G+ 
Sbjct: 116 LSLMGVTVRYVDPEPEAVREALSAKTRAVFVETVANPALLVP---DLEALATLAEEAGVA 172

Query: 218 VISDEVYDHLTFGSTPY 234
           ++ D      TFG+   
Sbjct: 173 LVVDN-----TFGAAGA 184

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes} Length = 430

 Score = 47.2 bits (113), Expect = 7e-06
 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 15/78 (19%)

Query: 163 LPEKGWEV------DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
           LP  G EV      D   +E   DE T  + +    NP   V     L+ +++     GI
Sbjct: 142 LPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVA---DLEALSKVVHAKGI 198

Query: 217 MVISDEVYDHLTFGSTPY 234
            ++ D      T    PY
Sbjct: 199 PLVVDT-----TMT-PPY 210

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3 Length = 421

 Score = 44.4 bits (106), Expect = 5e-05
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 15/79 (18%)

Query: 163 LPEKGWEV-------DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215
           L   G EV         +   AL DE T A  + + GNP  N+     L+ +A+ AR+ G
Sbjct: 118 LKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIP---DLEALAQAAREKG 174

Query: 216 IMVISDEVYDHLTFGSTPY 234
           + +I D      TFG   Y
Sbjct: 175 VALIVDN-----TFGMGGY 188

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Length = 371

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 32/147 (21%)

Query: 91  ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
               +  +L          D   +T G ++A   ++  LA+  A +++          N 
Sbjct: 59  IHNQLPKFLGC--------DVARVTNGAREAKFAVMHSLAKKDAWVVMD--------ENC 102

Query: 151 RH--------TRLEIRHFDLLPEKGWEVDLDGLEALADENT----VAMVIVN-PGNPCGN 197
            +          L I          + +  +      +E      V + ++  P    GN
Sbjct: 103 HYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGN 162

Query: 198 VFTYQQLQKIAEKARKLGIMVISDEVY 224
           +     ++KIA+   +  + ++ +  Y
Sbjct: 163 L---PDVKKIAKVCSEYDVPLLVNGAY 186

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis} Length = 406

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 56/186 (30%)

Query: 68  DAVVDAVRSAEFDCYSPSVGILP-----------ARRAIADYLNSELPCKLSPDDVYLTA 116
           D+V   V +A     + +VG  P           AR A+AD +N++      P  V L A
Sbjct: 40  DSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNAD------PGGVVLGA 93

Query: 117 GCKQAIQVILTVLAR---PGANILLPKPGFPLYE--AN-------ARHTRLEIRHFDLLP 164
                + ++    +     G  +++ +      +  AN       A     +++  ++  
Sbjct: 94  DRAVLLSLLAEASSSRAGLGYEVIVSR-----LDDEANIAPWLRAAHRYGAKVKWAEVDI 148

Query: 165 EKGWEVDLDGLEALADENT--VAMV-------IVNPGNPCGNVFTYQQLQKIAEKARKLG 215
           E G E+     E+L  ++T  VA+         V              L+ + +    +G
Sbjct: 149 ETG-ELPTWQWESLISKSTRLVAVNSASGTLGGVTD------------LRAMTKLVHDVG 195

Query: 216 IMVISD 221
            +V+ D
Sbjct: 196 ALVVVD 201

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii} Length = 397

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 24/212 (11%), Positives = 69/212 (32%), Gaps = 39/212 (18%)

Query: 25  LTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS--AEFDCY 82
           ++ +  L  +K+    +          G+     C    P+    V   + +   +   +
Sbjct: 10  VSEKEILEELKKYRSLDLKYE-----DGNIFGSMCSNVLPITRKIVDIFLETNLGDPGLF 64

Query: 83  SPSVGILPAR--RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA---------- 130
                +L  +    +   LN++          ++ +G  +A   ++ +            
Sbjct: 65  -KGTKLLEEKAVALLGSLLNNKDAY------GHIVSGGTEAN--LMALRCIKNIWREKRR 115

Query: 131 -----RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185
                     I++P      +E       LE  +  +  +  + +D   ++   ++  V 
Sbjct: 116 KGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKED--YTIDEKFVKDAVEDYDVD 173

Query: 186 MVIVNPGN-PCGNVFTYQQLQKIAEKARKLGI 216
            +I   G    G   T   ++++++ A++  I
Sbjct: 174 GIIGIAGTTELG---TIDNIEELSKIAKENNI 202

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A* Length = 415

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 15/120 (12%), Positives = 32/120 (26%), Gaps = 22/120 (18%)

Query: 121 AIQVILTVLARPGANILLPK----PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176
           A+   +      G ++L+      P             +    FD L           + 
Sbjct: 109 AVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-------IGADIV 161

Query: 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPY 234
                NT  + + +PG+          +  I    R +    +++ D      T+     
Sbjct: 162 KHLQPNTKIVFLESPGSI---TMEVHDVPAIVAAVRSVVPDAIIMIDN-----TWA-AGV 212

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 9e-04
 Identities = 22/145 (15%), Positives = 43/145 (29%), Gaps = 34/145 (23%)

Query: 270 DPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIF-------KNTKEDFFSKIVDILR 322
           D   +    + + S +   +I             ++F       +   + F     ++LR
Sbjct: 34  DCKDVQDMPKSILSKEEIDHIIMSKDAVSG--TLRLFWTLLSKQEEMVQKFV---EEVLR 88

Query: 323 DTADICYDRIKEIPCITCPRKPEGSMF--------------VMVKLNLSLLEGISDDMEF 368
                    IK        R+P                   V  K N+S L+     +  
Sbjct: 89  INYKFLMSPIKTEQ-----RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY-LKLRQ 142

Query: 369 ALQLAKEESVIVLPGMAVGM-KNWL 392
           AL   +    +++ G+  G  K W+
Sbjct: 143 ALLELRPAKNVLIDGVL-GSGKTWV 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	421
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	100.0
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	100.0
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	100.0
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	100.0
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	100.0
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	100.0
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
1iug_A	352	Putative aspartate aminotransferase; wild type, py	100.0
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	100.0
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	100.0
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	100.0
1svv_A	359	Threonine aldolase; structural genomics, structura	100.0
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	100.0
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	100.0
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	100.0
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	100.0
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	100.0
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	100.0
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	100.0
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	100.0
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	100.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	100.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	100.0
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	100.0
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	100.0
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	100.0
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	100.0
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	100.0
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	100.0
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	100.0
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	100.0
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	100.0
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.98
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.98
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.98
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.98
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.98
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.98
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.98
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.98
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.97
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.97
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.97
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.97
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.97
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.97
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.97
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.97
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.97
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.97
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.97
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.97
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.97
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.97
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.97
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.97
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.97
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.97
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.97
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.97
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.97
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.97
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.97
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.97
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.97
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.97
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.97
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.97
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.97
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.97
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.97
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.97
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.96
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.96
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.96
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.96
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.96
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.96
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.96
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.96
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.96
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.96
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.96
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.96
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.96
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.96
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.96
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.96
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.95
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.95
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.95
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.95
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.95
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.95
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.95
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.95
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.95
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.94
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.94
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.94
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.94
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.94
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.94
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.89
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.93
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.93
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.93
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.93
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.93
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.92
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.92
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.92
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.91
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.91
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.91
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.91
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.9
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.89
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.89
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.88
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.86
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.81
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.8
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.8
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.75

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=1.5e-54  Score=417.76  Aligned_cols=404  Identities=35%  Similarity=0.723  Sum_probs=333.0

Q ss_pred             cccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCC
Q 014631            9 KWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGI   88 (421)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~   88 (421)
                      .|.+.++  ++.+.++++|+++++.++.+  ...+.++|+|+.|.|.....+++++.+++++.+.+.......|++..|+
T Consensus        23 ~w~~~~~--~~~~~~~~~i~~~~~~~~~~--~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~   98 (427)
T 3dyd_A           23 MWSVRPS--DMAKKTFNPIRAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGF   98 (427)
T ss_dssp             -CCCCCC--C----------------CCC--CCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCC
T ss_pred             ccCcchh--hHhhcccchHHHHHHHHhhc--ccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCc
Confidence            4776665  45556677899998877643  3457789999999987655678999999999999987656689999999


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCc
Q 014631           89 LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGW  168 (421)
Q Consensus        89 ~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  168 (421)
                      .++|++++++++.. +.++++++|++|+|+++|+..++..+.++||+|++++|+|.++...++..|.+++.++.++++++
T Consensus        99 ~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  177 (427)
T 3dyd_A           99 LSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSW  177 (427)
T ss_dssp             HHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred             HHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCC
Confidence            99999999999765 66678899999999999999999999999999999999999999999999999999998776778


Q ss_pred             cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      .+|++++++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++..+.++..++.+.++++
T Consensus       178 ~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~  257 (427)
T 3dyd_A          178 EIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILS  257 (427)
T ss_dssp             EECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEE
T ss_pred             CCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEE
Confidence            89999999999888999999999999999999999999999999999999999999999988877767777776677899


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC  328 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  328 (421)
                      ++||||.|+++|+|+||++++++.... .+++.+.+......+.+++++.+.++.++|+.....++++.+++++++++.+
T Consensus       258 ~~S~sK~~~~~G~riG~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l  336 (427)
T 3dyd_A          258 CGGLAKRWLVPGWRLGWILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLC  336 (427)
T ss_dssp             EEESTTTSSCGGGCCEEEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             EeeccccCCCcCcceEEEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999997643222 1346666665543346889999999999998545678889999999999999


Q ss_pred             HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHH
Q 014631          329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLG  408 (421)
Q Consensus       329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~  408 (421)
                      .+.|+++|++. +..|.+++|+|+.++....+...++.+++..+++++||.+.||..|+.++++|++++.++++++++++
T Consensus       337 ~~~L~~~~g~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l~  415 (427)
T 3dyd_A          337 YGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACS  415 (427)
T ss_dssp             HHHHHHSTTEE-EECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHH
T ss_pred             HHHHhcCCCce-ecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHHH
Confidence            99999988988 44789999999988754332223567888888878999999999998889999999999999999999


Q ss_pred             HHHHHHHHhhh
Q 014631          409 RIKAFCQRHAK  419 (421)
Q Consensus       409 ~l~~~~~~~~~  419 (421)
                      +|.++++++++
T Consensus       416 ~l~~~l~~~~~  426 (427)
T 3dyd_A          416 RIQEFCEQHYH  426 (427)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhhc
Confidence            99999988763

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=7.1e-51  Score=387.09  Aligned_cols=375  Identities=21%  Similarity=0.384  Sum_probs=316.0

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ..++.++.+.++++....++...  .++++|+|+.|.|.    ++.++.+.+++.+.+... ...|++..|.+++|++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia   78 (385)
T 1b5p_A            6 RRVQAMKPSATVAVNAKALELRR--QGVDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALA   78 (385)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred             hHHhhcCcchHHHHHHHHHHHHh--cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHH
Confidence            45667777888887776654332  36789999999875    466789999999888764 347988889999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      ++++..+|..+++++|++|+|+++++++++++++++||+|+++.|+|.++...++..|.+++.+++++++++.+|+++++
T Consensus        79 ~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  158 (385)
T 1b5p_A           79 EKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVR  158 (385)
T ss_dssp             HHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHH
T ss_pred             HHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHH
Confidence            99999888888899999999999999999999999999999999999999999999999999999875557789999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      +.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++ ...++..++. +++++++||||.|
T Consensus       159 ~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK~~  236 (385)
T 1b5p_A          159 RAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAKAF  236 (385)
T ss_dssp             TTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTTTT
T ss_pred             HhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechhhc
Confidence            9998888999999999999999999999999999999999999999999988866 4445555554 6799999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHHHhh
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNT--KEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      +++|+|+||++++        +++++.+..... .+.+++.+.|.++.++|+..  ...++++.+++++++++.+.+.|+
T Consensus       237 ~~~G~RiG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~  308 (385)
T 1b5p_A          237 AMTGWRIGYACGP--------KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLT  308 (385)
T ss_dssp             TCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccceEEEEeC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999985        356677666543 23577889999988888641  246688889999999999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      ++ |+. +..|.+++|+|+.++...    .+..++...++ ++||.+.||..|+.++++|+|++++++++++++++|.++
T Consensus       309 ~~-g~~-~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~~~  381 (385)
T 1b5p_A          309 AL-GLK-AVRPSGAFYVLMDTSPIA----PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARV  381 (385)
T ss_dssp             HH-TCC-BCCCSBTTEEEEECTTTC----SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred             HC-CCe-ecCCCeeEEEEEecCCCC----CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence            87 887 457888899998886311    24667777775 789999999998777899999999999999999999877


Q ss_pred             HH
Q 014631          414 CQ  415 (421)
Q Consensus       414 ~~  415 (421)
                      ++
T Consensus       382 l~  383 (385)
T 1b5p_A          382 LG  383 (385)
T ss_dssp             C-
T ss_pred             Hh
Confidence            64

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=8.9e-51  Score=390.58  Aligned_cols=402  Identities=32%  Similarity=0.598  Sum_probs=326.1

Q ss_pred             ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631           10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL   89 (421)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~   89 (421)
                      |.+..+ . ......+.++.+...+...   ....++|+|+.|.|..++.+++++.+.+++.+.+.......|++..|..
T Consensus         4 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~   78 (416)
T 1bw0_A            4 WDVSMS-N-HAGLVFNPIRTVSDNAKPS---PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP   78 (416)
T ss_dssp             CCCCCC-H-HHHTCCCHHHHHHHTCCCC---CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCH
T ss_pred             cccCch-h-hhhccccHHHHHHHHHHHh---hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCH
Confidence            777666 3 3333345677766543321   1236799999999875445788999999999998875556898888999


Q ss_pred             HHHHHHHHHHhh------hCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631           90 PARRAIADYLNS------ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL  163 (421)
Q Consensus        90 ~l~~~ia~~l~~------~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  163 (421)
                      ++|+++++++++      ..|..+++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++++
T Consensus        79 ~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~  158 (416)
T 1bw0_A           79 EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCR  158 (416)
T ss_dssp             HHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEE
T ss_pred             HHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecC
Confidence            999999999983      25656788999999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC----Ccccccc
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST----PYVRMGV  239 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~----~~~~~~~  239 (421)
                      +++++.+|++++++.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++|.    ...++..
T Consensus       159 ~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~  238 (416)
T 1bw0_A          159 PENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD  238 (416)
T ss_dssp             GGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTS
T ss_pred             cccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHH
Confidence            655678999999999988889999999999999999999999999999999999999999999888776    4455555


Q ss_pred             cCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          240 FGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       240 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      ++..+++++++|+||.|+++|+|+||++++++....  ..+...+........+++++.+.++.++|+.....++++..+
T Consensus       239 ~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  316 (416)
T 1bw0_A          239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVA  316 (416)
T ss_dssp             SCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred             ccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhH--HHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHH
Confidence            555556899999999999999999999997641122  123333333322235788899999999997544678889999


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCC
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE  399 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~  399 (421)
                      +++++++++.+.|+++|++. +..|.+++|+|+.++....++..+..+++..+++++||.+.||..|+.++++|++++.+
T Consensus       317 ~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~  395 (416)
T 1bw0_A          317 KIEESAMYLYNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRP  395 (416)
T ss_dssp             HHHHHHHHHHHHHTTSTTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSC
T ss_pred             HHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCC
Confidence            99999999999999888888 44678899999888643211112466777777778899999999888788999999989


Q ss_pred             HHHHHHHHHHHHHHHHHhhh
Q 014631          400 PSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++++++++++|.+++++.++
T Consensus       396 ~e~l~~~l~~l~~~l~~~~~  415 (416)
T 1bw0_A          396 VEVYREAVERIKAFCQRHAA  415 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHBC
T ss_pred             HHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999988654

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=2.7e-49  Score=382.77  Aligned_cols=382  Identities=21%  Similarity=0.334  Sum_probs=318.1

Q ss_pred             ccccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCC
Q 014631            8 KKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPS   85 (421)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~   85 (421)
                      ..|...++ ...+.++++.++.+.....       ++++|+|+.|.|..  .+.+++.+.+++.+.++..  ....|++.
T Consensus        48 ~~~~~~~s-~~~~~~~~s~~~~~~~~~~-------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~  117 (448)
T 3aow_A           48 GDVERFFS-KKALEMRASEVRELLKLVE-------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTT  117 (448)
T ss_dssp             SCGGGGCC-HHHHHCCCCHHHHHHHHHH-------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCT
T ss_pred             cchHHHhh-HHHhcCCCcHHHHHHHhcc-------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCC
Confidence            34776667 5667777888998887554       56799999999873  2346788999999888753  13479888


Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE  165 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~  165 (421)
                      .|.+++|+++++++.+.+|.+ ++++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.+++
T Consensus       118 ~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~  196 (448)
T 3aow_A          118 KGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE  196 (448)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred             CCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC
Confidence            899999999999997777766 7899999999999999999999999999999999999999999999999999988642


Q ss_pred             CCccCCHHHHHhhhc----c--CceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631          166 KGWEVDLDGLEALAD----E--NTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG  238 (421)
Q Consensus       166 ~~~~~d~e~l~~~~~----~--~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  238 (421)
                         ++|++++++.++    +  ++++| ++++|+||||.++|.+++++|+++|++||++||+||+|+.+.++|....++.
T Consensus       197 ---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~  273 (448)
T 3aow_A          197 ---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIK  273 (448)
T ss_dssp             ---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTG
T ss_pred             ---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence               489999999886    5  67877 4689999999999999999999999999999999999999998777666666


Q ss_pred             ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHH
Q 014631          239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSK  316 (421)
Q Consensus       239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~  316 (421)
                      .++..+++++++||||.|+ +|+|+||++++        +++++.+..... ...+++.+.|.++.++|+... ..++++
T Consensus       274 ~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~  344 (448)
T 3aow_A          274 ALDNEGRVIYLGTFSKILA-PGFRIGWMVGD--------PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPE  344 (448)
T ss_dssp             GGCTTSCEEEEEESTTTTC-GGGCCEEEEEC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred             hcCCCCCEEEEccchhhcc-ccccEEEEEeC--------HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHH
Confidence            7766678999999999998 99999999996        357777765543 234678899999999997532 567888


Q ss_pred             HHHHHHHHHHHHHHHhhc-CC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CC
Q 014631          317 IVDILRDTADICYDRIKE-IP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KN  390 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~  390 (421)
                      .++.++++++.+.+.|++ +| ++. +..|.+|+|+|++++..     .+..+++..+++ +||.+.||..|+.    .+
T Consensus       345 ~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~~~v~~~~~-----~~~~~l~~~l~~-~gV~v~pg~~f~~~~~~~~  417 (448)
T 3aow_A          345 IRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMFIWVTLPDG-----IDSKKMLERAIK-KGVAYVPGEAFYAHRDVKN  417 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHH-TTEECEEGGGGSTTCCCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEEEEEEcCCC-----CCHHHHHHHHHH-CCcEEEcchhhcCCCCCCC
Confidence            899999999999999987 57 687 44788899999999742     246677777655 5999999988843    57


Q ss_pred             eEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631          391 WLRITFA-IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       391 ~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++|++++ .+++++++++++|.+++++..+
T Consensus       418 ~iRls~~~~~~e~i~~~~~~L~~~l~~~~~  447 (448)
T 3aow_A          418 TMRLNFTYVDEDKIMEGIKRLAETIKEELK  447 (448)
T ss_dssp             EEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8999998 4799999999999999987654

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=2.3e-49  Score=381.51  Aligned_cols=378  Identities=20%  Similarity=0.378  Sum_probs=320.5

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSVGILPARRAI   95 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l~~~i   95 (421)
                      +.++..+++.++.+.....       +.++|+|+.|.|.    +++++.+.+++.+.+.... ...|++..|..++|+++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l   76 (422)
T 3fvs_A            8 RRLDGIDYNPWVEFVKLAS-------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKIL   76 (422)
T ss_dssp             GGGTTCCCCHHHHHHHHHH-------TSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHH
T ss_pred             HHhhccCccHHHHHHHHhh-------cCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHH
Confidence            4566666778888877654       5789999999966    5788999999999988753 45898888999999999


Q ss_pred             HHHHhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC----------
Q 014631           96 ADYLNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP----------  164 (421)
Q Consensus        96 a~~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~----------  164 (421)
                      ++++++.+|..+++ ++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.+++++          
T Consensus        77 a~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~  156 (422)
T 3fvs_A           77 ASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGS  156 (422)
T ss_dssp             HHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCB
T ss_pred             HHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccccccc
Confidence            99999988888888 7999999999999999999999999999999999999999999999999999875          


Q ss_pred             CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-C
Q 014631          165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-T  243 (421)
Q Consensus       165 ~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~  243 (421)
                      ++++.+|++++++.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++....++..++. .
T Consensus       157 ~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  236 (422)
T 3fvs_A          157 SSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMW  236 (422)
T ss_dssp             GGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTG
T ss_pred             ccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhccccc
Confidence            235678999999999888999999999999999999999999999999999999999999999988876666666553 4


Q ss_pred             CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc------cchhHHHH
Q 014631          244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN------TKEDFFSK  316 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~------~~~~~~~~  316 (421)
                      ++++++.|+||.|+++|+|+||++++        +++++.+..... ...+++++.+.++..+++.      ....++++
T Consensus       237 ~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  308 (422)
T 3fvs_A          237 ERTLTIGSAGKTFSATGWKVGWVLGP--------DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQ  308 (422)
T ss_dssp             GGEEEEEEHHHHHTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHH
T ss_pred             CcEEEEecchhccCCccceEEEEEeC--------HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHH
Confidence            67899999999999999999999985        356677665543 3457788999999888863      13567888


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCC---------hHHHHHHHHhhcCeeEEeCCCCC
Q 014631          317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD---------DMEFALQLAKEESVIVLPGMAVG  387 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gv~v~~g~~~~  387 (421)
                      .+++++++++.+.+.|+++ |+. +..|.+++|+|+.++..... ..+         ..+++..+++++||.+.||+.|+
T Consensus       309 ~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~  385 (422)
T 3fvs_A          309 FPQAMQRCRDHMIRSLQSV-GLK-PIIPQGSYFLITDISDFKRK-MPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFY  385 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECHHHHHH-CCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGS
T ss_pred             HHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeeEEEEechhhccc-ccccccccccccHHHHHHHHHHhcCEEEeCcHHhc
Confidence            9999999999999999988 887 44789999999988642110 001         45778888888999999999885


Q ss_pred             C-------CCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          388 M-------KNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       388 ~-------~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                      .       .+++|+|++.+++++++++++|++++++
T Consensus       386 ~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          386 SVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             CHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred             CCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence            3       6899999999999999999999998864

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=8.2e-49  Score=373.41  Aligned_cols=379  Identities=20%  Similarity=0.383  Sum_probs=315.4

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      .+...+++.++.+....++..  ..++++++|+.|.+.    ++.++.+.+++.+.+... ...|++..|..++|+++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~   78 (388)
T 1j32_A            6 RVESVSPSMTLIIDAKAKAMK--AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQ   78 (388)
T ss_dssp             HHHTSCCCSSTTTHHHHHHHH--TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHH
T ss_pred             HhHhCCccHHHHHHHHHHHHH--hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence            344455555666555554432  237889999999865    456889999999988764 3579888899999999999


Q ss_pred             HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      ++++.+|..+++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|++++++
T Consensus        79 ~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  158 (388)
T 1j32_A           79 KLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQ  158 (388)
T ss_dssp             HHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHH
T ss_pred             HHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHH
Confidence            99988887788899999999999999999999999999999999999999999999999999988655567899999999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKR  255 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~  255 (421)
                      .++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..++.  .++++++.|+||.
T Consensus       159 ~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~  238 (388)
T 1j32_A          159 AITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT  238 (388)
T ss_dssp             HCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTT
T ss_pred             hcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhc
Confidence            99888899999999999999999999999999999999999999999999887765545555442  3467999999999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |+++|+|+||++++        +++.+.+..... .+.+++.+.+.++.++|+. ...++++.+++++++++++.+.|++
T Consensus       239 ~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~  309 (388)
T 1j32_A          239 YAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN-SQDCVQEMLAAFAERRRYMLDALNA  309 (388)
T ss_dssp             TTCTTTCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            98899999999985        356666665543 2456788888888888874 3567888899999999999999999


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      +|++. +..|.+++++|+.++...    .+..++...+++++||.+.||..|+.++++|++++++++++++++++|.+++
T Consensus       310 ~~g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l  384 (388)
T 1j32_A          310 MPGLE-CPKPDGAFYMFPSIAKTG----RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFL  384 (388)
T ss_dssp             CTTCB-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCc-ccCCCeeEEEEEecCCCC----CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHHHHH
Confidence            88888 447788888888775311    1466777777666899999999887788999999999999999999999998


Q ss_pred             HHh
Q 014631          415 QRH  417 (421)
Q Consensus       415 ~~~  417 (421)
                      +++
T Consensus       385 ~~~  387 (388)
T 1j32_A          385 HGI  387 (388)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            765

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=4.7e-49  Score=375.47  Aligned_cols=373  Identities=21%  Similarity=0.369  Sum_probs=303.1

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL   99 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l   99 (421)
                      +.++++.++.+....++..  ..++++|||+.|.+.    ++.++.+.+++.+.+.... ..|++..|..++|+++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~   81 (391)
T 3h14_A            9 SAVDPFIVMDVMEAARRAE--EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQRIARLY   81 (391)
T ss_dssp             TCCCCCTTHHHHHHHHHHH--HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHH
T ss_pred             hhcCcchHHHHHHHHHHHH--hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHHHH
Confidence            3444566666665554322  247899999999866    5678899999999887643 58988889999999999999


Q ss_pred             hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631          100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA  179 (421)
Q Consensus       100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~  179 (421)
                      ++.+|.++++++|++|+|++++++.++++++++||+|++++|+|.++...++..|.+++.+++++++++.+|++++++. 
T Consensus        82 ~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~-  160 (391)
T 3h14_A           82 GEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL-  160 (391)
T ss_dssp             HHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS-
T ss_pred             HHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc-
Confidence            9988888899999999999999999999999999999999999999999999999999999987766778999999877 


Q ss_pred             ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631          180 DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       180 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  259 (421)
                        +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++... +...+  .+++++++|+||.++++
T Consensus       161 --~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~~  235 (391)
T 3h14_A          161 --DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFSKYFSMT  235 (391)
T ss_dssp             --CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESSSTTCCT
T ss_pred             --CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEechhccCCc
Confidence              68899999999999999999999999999999999999999999998877532 22222  45679999999999889


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI  338 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  338 (421)
                      |+|+||+++++        ++.+.+..... ...+++.+.+.++.++++  ...++++.+++++++++.+.+.|+++ ++
T Consensus       236 G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~-~~  304 (391)
T 3h14_A          236 GWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKA-GF  304 (391)
T ss_dssp             TSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred             cceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence            99999999863        35555555443 345788899999888887  46788999999999999999999987 44


Q ss_pred             cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      ..+..|.+++++|+.++...    .+..+++..+++++||.+.||..|+.   ++++|++++.+++++++++++|.++++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~  380 (391)
T 3h14_A          305 TRIAPPDGAFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQ  380 (391)
T ss_dssp             CCBCCCCBTTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCeeEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence            32447888899999886421    25677888877777999999999876   579999999889999999999999998


Q ss_pred             Hhhhc
Q 014631          416 RHAKQ  420 (421)
Q Consensus       416 ~~~~~  420 (421)
                      +....
T Consensus       381 ~~~~~  385 (391)
T 3h14_A          381 ARGEG  385 (391)
T ss_dssp             HC---
T ss_pred             Hhccc
Confidence            87654

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=1.2e-48  Score=373.47  Aligned_cols=378  Identities=19%  Similarity=0.365  Sum_probs=308.7

Q ss_pred             hHHhhh--hhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCCCCCCHHH
Q 014631           17 EHITAT--ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE---FDCYSPSVGILPA   91 (421)
Q Consensus        17 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~l   91 (421)
                      +.++.+  .++.+++++...++...+..+.++|||+.|.|.    +++++.+.+++.+.+....   ...|++..|..++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~l   81 (398)
T 3ele_A            6 ESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVET   81 (398)
T ss_dssp             HHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHH
T ss_pred             HHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHH
Confidence            344554  367788877665544333346789999999765    5678999999999987632   4579888999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631           92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV  170 (421)
Q Consensus        92 ~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  170 (421)
                      |+++++++++.+|.++++++|++|+|+++++..++++++++| |+|++++|+|+++...++..|.+++.+++++ +++++
T Consensus        82 r~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~  160 (398)
T 3ele_A           82 RAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHFQI  160 (398)
T ss_dssp             HHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTSSC
T ss_pred             HHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCCcC
Confidence            999999999988888899999999999999999999999999 9999999999999999999999999999864 36789


Q ss_pred             CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh------cCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK------LGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                      |++++++.++++++++++++|+||||.++|.+++++|+++|++      ||+++|+||+|+++.++|.......  ...+
T Consensus       161 d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~~  238 (398)
T 3ele_A          161 DFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT--KYYD  238 (398)
T ss_dssp             CHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG--GTCS
T ss_pred             CHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH--hhcC
Confidence            9999999998889999999999999999999999999999999      9999999999999988775433322  2345


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR  322 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  322 (421)
                      ++++++|+||.|+++|+|+||+++++..  .....+...+.....  .+.+++.+.+.++..+++...      .+++++
T Consensus       239 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~  310 (398)
T 3ele_A          239 NTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG------DINAYK  310 (398)
T ss_dssp             SEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC------CHHHHH
T ss_pred             CeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH------HHHHHH
Confidence            7899999999998899999999997532  111224444433322  234677788888877776422      356778


Q ss_pred             HHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHH
Q 014631          323 DTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSA  402 (421)
Q Consensus       323 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~  402 (421)
                      ++++++.+.|+++ ++. +..|.+++++|+.++..      +..++... +.++||.+.||..|+.++++|++++.++++
T Consensus       311 ~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~------~~~~~~~~-l~~~gi~v~~g~~~~~~~~iRis~~~~~e~  381 (398)
T 3ele_A          311 ENRDLLYEGLTRI-GYH-CFKPDGAFYMFVKALED------DSNAFCEK-AKEEDVLIVAADGFGCPGWVRISYCVDREM  381 (398)
T ss_dssp             HHHHHHHHHHHHH-TCC-EECCSBSSEEEEECSSS------CHHHHHHH-HHTTTEECEESGGGTCTTEEEEECCSCHHH
T ss_pred             HHHHHHHHHHHHc-CCe-ecCCCeeEEEEEEcCCC------CHHHHHHH-HHHCCEEEeCccccCCCCeEEEEecCCHHH
Confidence            8888899999877 777 44788899999988642      45666665 577899999999998889999999999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 014631          403 LEEGLGRIKAFCQRHA  418 (421)
Q Consensus       403 l~~~~~~l~~~~~~~~  418 (421)
                      +++++++|.+++++++
T Consensus       382 i~~~l~~l~~~l~~~~  397 (398)
T 3ele_A          382 IKHSMPAFEKIYKKYN  397 (398)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999998875

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.9e-48  Score=372.55  Aligned_cols=381  Identities=20%  Similarity=0.333  Sum_probs=303.5

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +..++++.++.+....++. . ..+.++|||+.|.+.    ++.++.+.+++.+.+.......|++..|..++|++++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~-~-~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   87 (412)
T 2x5d_A           14 IDRLPPYVFNITAELKMAA-R-RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHW   87 (412)
T ss_dssp             -------CHHHHHHHHHHH-H-HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHH
T ss_pred             HhhcCchHHHHHHHHHHHH-h-hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence            4455556666655444322 1 247889999999865    457899999999888664345788888999999999999


Q ss_pred             HhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           99 LNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        99 l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      +.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|+++...++..|.+++.++.++++++.+|++++++
T Consensus        88 ~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~  167 (412)
T 2x5d_A           88 YRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIR  167 (412)
T ss_dssp             HHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHH
Confidence            98877877777 79999999999999999999999999999999999999999999999999998755466689999999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~  256 (421)
                      .+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+.|....++..++. .+++++++|+||.|
T Consensus       168 ~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (412)
T 2x5d_A          168 ESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY  247 (412)
T ss_dssp             TEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CC
T ss_pred             hcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCcccc
Confidence            98888899999999999999999999999999999999999999999999887655445555543 45789999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+|+||++++        +++++.+..... .+.+++++.+.++.++|+.. +.++++.+++++++++.+.+.|+++
T Consensus       248 ~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~  318 (412)
T 2x5d_A          248 NMAGWRIGFMVGN--------PELVSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREA  318 (412)
T ss_dssp             SCTTSCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccceEEEEcC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            8899999999985        356777765543 24578889999999888753 4678889999999999999999987


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                       ++. +..|.+|+|+|+.++....  ..+..+++..+++++||.+.||..|+.  ++++|++++.+++++++++++|.++
T Consensus       319 -g~~-~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~  394 (412)
T 2x5d_A          319 -GWM-VENPKASMYVWAKIPEPYA--HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAM  394 (412)
T ss_dssp             -TCC-CCCCSBSSEEEEECCTTTG--GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHH
T ss_pred             -CCE-ecCCCeeeEEEEEcCCccC--CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence             777 4477788899998863210  003567777776778999999988863  5799999998999999999999999


Q ss_pred             HHHhh
Q 014631          414 CQRHA  418 (421)
Q Consensus       414 ~~~~~  418 (421)
                      ++++.
T Consensus       395 l~~~~  399 (412)
T 2x5d_A          395 FRADG  399 (412)
T ss_dssp             HHHTT
T ss_pred             HHhcC
Confidence            98754

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=6.6e-48  Score=367.30  Aligned_cols=377  Identities=24%  Similarity=0.456  Sum_probs=315.3

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ..+..++++.++.+....++      ..++|+|+.|.+.    ++.++.+.+++.+.+... ...|++..|..++|++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la   73 (389)
T 1gd9_A            5 DRLELVSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIA   73 (389)
T ss_dssp             HHHHHSCCCHHHHHHHHHHT------CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred             hHhHhCChhHHHHHHHHHhh------hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHHHHH
Confidence            34566677888888877663      2579999999865    457899999999998764 347888889999999999


Q ss_pred             HHHhhhCCCCCCCCc-EEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631           97 DYLNSELPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~-i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +++.+.+|..+++++ |++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|++++
T Consensus        74 ~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  153 (389)
T 1gd9_A           74 EKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDEL  153 (389)
T ss_dssp             HHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHH
T ss_pred             HHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHH
Confidence            999887787778889 9999999999999999999999999999999999999999999999999986545677899999


Q ss_pred             HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccc
Q 014631          176 EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSK  254 (421)
Q Consensus       176 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK  254 (421)
                      ++.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++....++..++. .++++++.|+||
T Consensus       154 ~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  233 (389)
T 1gd9_A          154 KKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSK  233 (389)
T ss_dssp             HHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTT
T ss_pred             HHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChh
Confidence            9999888899999999999999999999999999999999999999999998887653444555443 456899999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l  332 (421)
                      .|+++|+|+||++++        +++++.+..... ...+++++.+.++.++|+... +.++++.+++++++++.+.+.|
T Consensus       234 ~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L  305 (389)
T 1gd9_A          234 TFAMTGWRLGFVAAP--------SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRL  305 (389)
T ss_dssp             TTTCGGGCCEEEECC--------HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCcccceEEEEEC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            998899999999985        357777766543 345778899999988887522 2278888999999999999999


Q ss_pred             hcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHH
Q 014631          333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                      +++ |+. +..|.+++++|+.++...    .+..++...+++++||.+.||..|+.  ++++|++++.+++++++++++|
T Consensus       306 ~~~-g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l  379 (389)
T 1gd9_A          306 NEM-GLP-TVKPKGAFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRM  379 (389)
T ss_dssp             HHT-TCC-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHH
T ss_pred             HHc-CCe-ecCCCeeeEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHH
Confidence            988 887 446788889998886311    14667777776588999999988864  6799999999999999999999


Q ss_pred             HHHHHHhh
Q 014631          411 KAFCQRHA  418 (421)
Q Consensus       411 ~~~~~~~~  418 (421)
                      .+++++..
T Consensus       380 ~~~~~~~~  387 (389)
T 1gd9_A          380 ERVLKERK  387 (389)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhcc
Confidence            99987643

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-48  Score=378.18  Aligned_cols=376  Identities=23%  Similarity=0.383  Sum_probs=307.3

Q ss_pred             hhhhhHHHHHHHHHHhc--cccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631           22 TATLTVRSALTIIKQNL--KENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL   99 (421)
Q Consensus        22 ~~~~~~~~~~~~~~~~~--~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l   99 (421)
                      ++++.++.+....++..  -+..+.++|||+.|.|.    +++++.+.+++.+++.......|++..|.+++|+++++++
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l  108 (447)
T 3b46_A           33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLY  108 (447)
T ss_dssp             CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHH
T ss_pred             cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHH
Confidence            44556666665543210  01136789999999875    4678999999999987633458988889999999999999


Q ss_pred             hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC----------Ccc
Q 014631          100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK----------GWE  169 (421)
Q Consensus       100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~----------~~~  169 (421)
                      .+.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++          +|.
T Consensus       109 ~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~  188 (447)
T 3b46_A          109 SPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT  188 (447)
T ss_dssp             TTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSE
T ss_pred             HHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcc
Confidence            9888888888999999999999999999999999999999999999999999999999999886543          578


Q ss_pred             CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc--CCCCCEE
Q 014631          170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF--GSTVPVI  247 (421)
Q Consensus       170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i  247 (421)
                      +|++++++.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++| ...++..+  +..++++
T Consensus       189 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i  267 (447)
T 3b46_A          189 IDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTL  267 (447)
T ss_dssp             ECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEE
T ss_pred             cCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEE
Confidence            99999999998889999999999999999999999999999999999999999999998876 33344444  1235789


Q ss_pred             EEcccccccCCCCceEEEEEe-eCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVT-SDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDT  324 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~  324 (421)
                      ++.|+||.|+++|+|+||+++ +        +++++.+..... ...+++++.|.++.++|+... +.++++.+++++++
T Consensus       268 ~i~S~sK~~~~~G~riG~~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~  339 (447)
T 3b46_A          268 TVGSAGKSFAATGWRIGWVLSLN--------AELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINK  339 (447)
T ss_dssp             EEEEHHHHTTCTTSCCEEEECSC--------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EEecCchhcCCcchhhEEEEeCC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHH
Confidence            999999999889999999998 5        356776665432 345678889999888887532 56788899999999


Q ss_pred             HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC----------CCChHHHHHHHHhhcCeeEEeCCCCCC------
Q 014631          325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG----------ISDDMEFALQLAKEESVIVLPGMAVGM------  388 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~gv~v~~g~~~~~------  388 (421)
                      ++.+.+.|+++ |+. +..|.+|+|+|++++....+.          ..++.+++.++++++||.+.||..|+.      
T Consensus       340 ~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~  417 (447)
T 3b46_A          340 FKIFTSIFDEL-GLP-YTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKA  417 (447)
T ss_dssp             HHHHHHHHHHH-TCC-EECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGG
T ss_pred             HHHHHHHHHHC-CCe-ecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCC
Confidence            99999999987 777 447888999999986421110          113557777787788999999988753      


Q ss_pred             -CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          389 -KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       389 -~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                       .+++|+|++.+++++++++++|.+
T Consensus       418 ~~~~iRls~~~~~e~l~~~~~~l~~  442 (447)
T 3b46_A          418 AENLLRFAVCKDDAYLENAVERLKL  442 (447)
T ss_dssp             GTTEEEEECCSCHHHHHHHHHHGGG
T ss_pred             CCCEEEEEEeCCHHHHHHHHHHHHH
Confidence             578999999999999999999887

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=5.5e-48  Score=368.71  Aligned_cols=370  Identities=19%  Similarity=0.344  Sum_probs=309.2

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      .++..++.+++.+....+. +....++++|+|+.|.+.    ++.++.+.+++.+.+..  ...|++..|..++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~   77 (396)
T 3jtx_A            5 LLKQLKPYPFARLHEAMQG-ISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLHE--LEKYPLTAGLPELRQACAN   77 (396)
T ss_dssp             HHHHCCSCHHHHHHHHTTT-CCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHH
T ss_pred             hhccCCCChHHHHHHHHHh-hhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHH
Confidence            4555666777777654443 333458999999999965    56789999999998763  4589888899999999999


Q ss_pred             HHhhhCCCC-CCCC-cEEEcCCHHHHHHHHHHHhcCCC-----CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631           98 YLNSELPCK-LSPD-DVYLTAGCKQAIQVILTVLARPG-----ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV  170 (421)
Q Consensus        98 ~l~~~~~~~-~~~~-~i~~~~g~~~al~~~~~~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  170 (421)
                      ++.+.+|.. ++++ +|++|+|+++++..++++++++|     |+|+++.|+|+++...++..|.+++.+++ +++++.+
T Consensus        78 ~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~  156 (396)
T 3jtx_A           78 WLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNP  156 (396)
T ss_dssp             HHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCC
T ss_pred             HHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCcc
Confidence            999988876 7788 99999999999999999999997     79999999999999999999999999998 4567778


Q ss_pred             CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc----cC-CCCC
Q 014631          171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV----FG-STVP  245 (421)
Q Consensus       171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~----~~-~~~~  245 (421)
                      |++++++.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++........    ++ ..++
T Consensus       157 d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (396)
T 3jtx_A          157 DWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK  236 (396)
T ss_dssp             CGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTT
T ss_pred             CHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCc
Confidence            999999988888999999999999999999999999999999999999999999999887732222211    11 2467


Q ss_pred             EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631          246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT  324 (421)
Q Consensus       246 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (421)
                      ++++.||||.|+++|+|+||++++        +++++.+..... ...+++++.+.++.++++.  ..++.+.+++++++
T Consensus       237 ~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~  306 (396)
T 3jtx_A          237 LLMFTSLSKRSNVPGLRSGFVAGD--------AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEK  306 (396)
T ss_dssp             EEEEEESTTTSSCGGGCCEEEEEC--------HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHH
T ss_pred             EEEEeccccccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHH
Confidence            899999999999999999999885        457777766543 3457889999999998875  57788999999999


Q ss_pred             HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--------CCeEEEEe
Q 014631          325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--------KNWLRITF  396 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~iRi~~  396 (421)
                      ++.+.+.|+++  +. +..|.+++|+|+.++..      +..+++..+++++||.+.||..|+.        .+++|+++
T Consensus       307 ~~~l~~~l~~~--~~-~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~  377 (396)
T 3jtx_A          307 FERVIPILQQV--FD-VKLPDASFYIWLKVPDG------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIAL  377 (396)
T ss_dssp             HHHHHHHHTTT--SC-CCCCSSSSEEEEECTTS------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEEC
T ss_pred             HHHHHHHHHhc--CC-ccCCCeeEEEEEECCCC------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEE
Confidence            99999999876  33 33688899999998741      4677888887888999999998864        47999999


Q ss_pred             cCCHHHHHHHHHHHHHHH
Q 014631          397 AIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       397 ~~~~e~l~~~~~~l~~~~  414 (421)
                      +.+++++++++++|.+++
T Consensus       378 ~~~~~~i~~~l~~l~~~l  395 (396)
T 3jtx_A          378 VADVATCVKAAEDIVSLY  395 (396)
T ss_dssp             CSCHHHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHHHh
Confidence            999999999999998864

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=8.7e-48  Score=366.33  Aligned_cols=369  Identities=25%  Similarity=0.412  Sum_probs=309.0

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      .++.++++.++++....++...  .++++|+|+.|.+.    ++.++.+.+++.+.+.... ..|++..|..++|+++++
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~--~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~   89 (389)
T 1o4s_A           17 RISEIPISKTMELDAKAKALIK--KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAK   89 (389)
T ss_dssp             HHHHSCCCSSHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHH
T ss_pred             HHhhcCccHHHHHHHHHHHHHh--cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHH
Confidence            3556667777777776654331  37889999999865    4567999999999987643 478887889999999999


Q ss_pred             HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      ++++.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|++++++
T Consensus        90 ~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  169 (389)
T 1o4s_A           90 RIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEG  169 (389)
T ss_dssp             HHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHH
T ss_pred             HHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHH
Confidence            99887787778899999999999999999999999999999999999999999999999999998654567899999999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~  256 (421)
                      .++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.++|. ..++..++. .++++++.|+||+|
T Consensus       170 ~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~  248 (389)
T 1o4s_A          170 LLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE-FTSILDVSEGFDRIVYINGFSKSH  248 (389)
T ss_dssp             TCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSC-CCCHHHHCSSSTTEEEEEESTTTT
T ss_pred             hcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCCHhhcCCCCCcEEEEeechhhc
Confidence            9988889999999999999999999999999999999999999999999887652 234444432 45689999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+|+||++++        +++.+.+..... .+.+++++.+.++.++|+..    +++.+++++++++++.+.|+++
T Consensus       249 ~~~G~r~G~l~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L~~~  316 (389)
T 1o4s_A          249 SMTGWRVGYLISS--------EKVATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERLKKM  316 (389)
T ss_dssp             TCGGGCCEEEECC--------HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcccceEEEEeC--------HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhc
Confidence            8899999999985        356676666543 23567888898888888752    6777888999999999999988


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                       ++. +..|.+++++|+.++ .      +..++...+++++||.+.||..|+.++++|++++.+++++++++++|.++++
T Consensus       317 -g~~-~~~~~~~~~~~~~~~-~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          317 -GVK-FVEPEGAFYLFFKVR-G------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN  387 (389)
T ss_dssp             -TCC-CCCCSBSSEEEEECS-S------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             -CCe-eecCCcceEEEEeCC-C------CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHHHHh
Confidence             887 446788889998886 1      4667777776578999999988877789999999999999999999998874

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=4.8e-48  Score=370.47  Aligned_cols=357  Identities=21%  Similarity=0.314  Sum_probs=305.6

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQAIQ  123 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~al~  123 (421)
                      .+|||+.|++.   .++.++.+++++.+.+.......|++..|..++++++++++.+.+|.++++ ++|++|+|+++++.
T Consensus        40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~  116 (407)
T 3nra_A           40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF  116 (407)
T ss_dssp             CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence            48999999866   257889999999999876433468888899999999999999988877766 79999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC----CCCccCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP----EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF  199 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~  199 (421)
                      .++.+++++||+|+++.|+|.++...++..|.+++.++++.    ++++.+|++++++.+.++++++++++|+||||.++
T Consensus       117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~  196 (407)
T 3nra_A          117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY  196 (407)
T ss_dssp             HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence            99999999999999999999999999999999999999743    35678999999999988899999999999999999


Q ss_pred             CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC--CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG--STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                      |.+++++|+++|++||+++|+||+|+.+.++|....++..++  ..++++++.||||.|+++|+|+||++++        
T Consensus       197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------  268 (407)
T 3nra_A          197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS--------  268 (407)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC--------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC--------
Confidence            999999999999999999999999999998887666666653  3567899999999999999999999985        


Q ss_pred             HHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631          278 LRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       278 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      +++++.+..... ...+++++.+.++..+++. ...++++.+++++++++.+.+.|+++|++. +..|.+++++|+.++.
T Consensus       269 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~  346 (407)
T 3nra_A          269 RAIIARMEKLQAIVSLRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVF-ARTPQAGSYLFPRLPK  346 (407)
T ss_dssp             HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCB-CCCCSBSSEECCBCCC
T ss_pred             HHHHHHHHHHHhhhccCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEeCCC
Confidence            357777766543 3446678888888888863 346788888999999999999999988888 5478888999988875


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ..    .+..++...|++++||.+.||..|+.  .+++|++++.+++++++++++|.+++++++
T Consensus       347 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~  406 (407)
T 3nra_A          347 LA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR  406 (407)
T ss_dssp             BS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred             CC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence            21    24667777776778999999998874  689999999999999999999999998765

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=2.5e-48  Score=372.78  Aligned_cols=372  Identities=21%  Similarity=0.348  Sum_probs=311.5

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      ++.++++.++.+.+.       ..+.++|+|+.|.|.    +++++.+.+++.+.+.......|++..|..++|++++++
T Consensus         5 ~~~~~~~~~~~~~~~-------~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~   73 (410)
T 3e2y_A            5 IEGLDSNVWVEFTKL-------AADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCL   73 (410)
T ss_dssp             GTTCCCCHHHHTTTT-------TTSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHH
T ss_pred             hccCCccHHHHHHHH-------hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHH
Confidence            444455666665542       236789999999966    678899999999998765556898888999999999999


Q ss_pred             HhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC---------CCCc
Q 014631           99 LNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP---------EKGW  168 (421)
Q Consensus        99 l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~---------~~~~  168 (421)
                      +++.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|.++...+...|.+++.+++++         +.++
T Consensus        74 ~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~  153 (410)
T 3e2y_A           74 YGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDW  153 (410)
T ss_dssp             HHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGE
T ss_pred             HHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCC
Confidence            99888888888 8999999999999999999999999999999999999999999999999998763         2456


Q ss_pred             cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEE
Q 014631          169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVI  247 (421)
Q Consensus       169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i  247 (421)
                      .+|++++++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.++|....++..+.. .++++
T Consensus       154 ~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i  233 (410)
T 3e2y_A          154 TFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTI  233 (410)
T ss_dssp             ECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred             cCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEE
Confidence            78999999999888999999999999999999999999999999999999999999999988776656655543 46789


Q ss_pred             EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc------cchhHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN------TKEDFFSKIVDI  320 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~  320 (421)
                      ++.|+||.|+++|+|+||++++        +++++.+..... ...+++++.+.++..+++.      ....++++.+++
T Consensus       234 ~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  305 (410)
T 3e2y_A          234 TIGSAGKTFSVTGWKLGWSIGP--------AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKE  305 (410)
T ss_dssp             EEEEHHHHSSCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHH
T ss_pred             EEecchhhcCCCCceEEEEEEC--------HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHH
Confidence            9999999999999999999985        356777765543 3457788999999888863      235678899999


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC-------CChHHHHHHHHhhcCeeEEeCCCCCC-----
Q 014631          321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI-------SDDMEFALQLAKEESVIVLPGMAVGM-----  388 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v~~g~~~~~-----  388 (421)
                      ++++++.+.+.|+++ |+. +..|.+++|+|+.+..... +.       .++.+++..+++++||.+.||+.|+.     
T Consensus       306 ~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~  382 (410)
T 3e2y_A          306 LEVKRDRMVRLLNSV-GLK-PIVPDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKP  382 (410)
T ss_dssp             HHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHH
T ss_pred             HHHHHHHHHHHHHHC-CCe-ecCCCccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCC
Confidence            999999999999988 887 4478899999998864211 00       01347777788889999999998853     


Q ss_pred             --CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          389 --KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       389 --~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                        .+++|+|++.+++++++++++|++
T Consensus       383 ~~~~~iRis~~~~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          383 HFEKLVRFCFIKKDSTLDAAEEIFRA  408 (410)
T ss_dssp             HHTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEEcCCHHHHHHHHHHHHh
Confidence              489999999999999999999875

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=2.1e-48  Score=369.82  Aligned_cols=369  Identities=13%  Similarity=0.111  Sum_probs=290.3

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHH-hcCCCCCCCCCCCCHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAV-RSAEFDCYSPSVGILPARRA   94 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~-~~~~~~~y~~~~g~~~l~~~   94 (421)
                      ++++..++++++++...+++..    .+++|||+.|.| +..+.+++++.+++++. .+ +....+.|.+..|+++||++
T Consensus         6 ~~~~~~~~~~i~~~~~~~~~~~----~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~a   80 (405)
T 3k7y_A            6 SSLENIEVDNILKTAREFKEDT----CEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL   80 (405)
T ss_dssp             GGCCCCCCCHHHHHHHHHTTSS----CSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHH
T ss_pred             hcCCCCCCChHHHHHHHHhcCC----CcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHH
Confidence            4677888999999998887543    578999999974 32334567899999887 44 44445689999999999999


Q ss_pred             HHHHHhhhCCCCCCCCc--EEEcCCHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631           95 IADYLNSELPCKLSPDD--VYLTAGCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV  170 (421)
Q Consensus        95 ia~~l~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  170 (421)
                      +++|+....+...++++  +++|+|+++|+.+++.++.+  | |+|++++|+|.+|...++..|++++.+++..++++++
T Consensus        81 ia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  159 (405)
T 3k7y_A           81 TQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI  159 (405)
T ss_dssp             HHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred             HHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence            99999776665556665  59999999999999999887  8 9999999999999999999999999999854556899


Q ss_pred             CHHHHHhhhcc--CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC--ccccccc-CCCC
Q 014631          171 DLDGLEALADE--NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP--YVRMGVF-GSTV  244 (421)
Q Consensus       171 d~e~l~~~~~~--~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~~~  244 (421)
                      |++++++.+.+  .++++++++| |||||.+++.+++++|+++|++||+++|+||+|.++.+++..  ..++..+ +..+
T Consensus       160 d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~  239 (405)
T 3k7y_A          160 NYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNI  239 (405)
T ss_dssp             CHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTC
T ss_pred             CHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCC
Confidence            99999998863  4567777655 899999999999999999999999999999999999876421  1222222 2346


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH----Hhhhc-ccccCCchHHHHHHHHHhhccc-----hhHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS----IKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFF  314 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~  314 (421)
                      ++++++||||.|+++|+|+||+++..+.     +++++.    +.... ..+++++.+.|.++..+++...     ...+
T Consensus       240 ~~i~~~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l  314 (405)
T 3k7y_A          240 AFSVCQSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKEL  314 (405)
T ss_dssp             CEEEEEECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             cEEEEeeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            8999999999999999999998753221     233333    33322 2345677888998888887521     2345


Q ss_pred             HHHHHHHHHHHHHHHHHhh----cCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC
Q 014631          315 SKIVDILRDTADICYDRIK----EIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG  387 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~----~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~  387 (421)
                      .+.+++++++++.+.+.|+    ++.   ++. +..|++|+|+|+.++.          +++.+| +++||.+.||.   
T Consensus       315 ~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~---  379 (405)
T 3k7y_A          315 SQLSQRITNNRILFFNKLETYQKKYNLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG---  379 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS---
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC---
Confidence            5667779999999999999    762   256 4479999999987752          345566 88999999963   


Q ss_pred             CCCeEEEEec-CCHHHHHHHHHHHHHHHHH
Q 014631          388 MKNWLRITFA-IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       388 ~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~  416 (421)
                           |||++ .+++++++++++|+++++.
T Consensus       380 -----Ris~a~~~~~~i~~~~~~i~~~~~~  404 (405)
T 3k7y_A          380 -----RINVSGITKNNVDYIADKICLSLSQ  404 (405)
T ss_dssp             -----EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred             -----eEEEeccCHHHHHHHHHHHHHHHhh
Confidence                 99998 7899999999999998864

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=6.2e-48  Score=369.52  Aligned_cols=386  Identities=26%  Similarity=0.463  Sum_probs=308.5

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ..+.+++.+.++.+. ..++..  ..++++|+|+.|.|... .++.++.+.+++.+.+... ...|++..|..++|++++
T Consensus        14 ~~~~~~~~~~~~~~~-~~~~~~--~~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la   88 (406)
T 1xi9_A           14 KRALSVEYAIRDVVL-PARELE--KKGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIV   88 (406)
T ss_dssp             HHHHTCCC--------CHHHHH--HTTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred             HHHhcCChhHHHHHH-HHHHHH--HcCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHH
Confidence            556666666666655 333221  23788999999987311 2467799999999988764 347888888999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      ++++..+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|+++++
T Consensus        89 ~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  168 (406)
T 1xi9_A           89 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR  168 (406)
T ss_dssp             HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred             HHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHH
Confidence            99998888888899999999999999999999999999999999999999999999999999999865456778999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEcccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKR  255 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~  255 (421)
                      +.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++ ...++..++ .++ +++++|+||.
T Consensus       169 ~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~  246 (406)
T 1xi9_A          169 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGLSKV  246 (406)
T ss_dssp             HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEESTTT
T ss_pred             HhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEeccccc
Confidence            9998888999999999999999999999999999999999999999999988743 233444554 456 7999999999


Q ss_pred             cCCCCceEEEEE--eeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          256 WIVPGWRLGWLV--TSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       256 ~~~~G~r~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      ++++|+|+||++  ++++.    ..++++.+........+++++.+.++.++|+.. ..++++.+++++++++.+.+.|+
T Consensus       247 ~~~~G~r~G~~~~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~  321 (406)
T 1xi9_A          247 YFATGWRLGYMYFVDPENK----LSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLN  321 (406)
T ss_dssp             TCCGGGCCEEEEEECTTCT----THHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCccEEEEEEEecCchh----HHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence            988999999999  64210    014566665543322567888999999999643 45588888999999999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIK  411 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~  411 (421)
                      ++|++. +..|.+++++|+.++...   ..+..++...+++++||.+.||..|+.  ++++|++++++++++++++++|.
T Consensus       322 ~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~  397 (406)
T 1xi9_A          322 EIPGIS-TTKPQGAFYIFPKIEVGP---WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFE  397 (406)
T ss_dssp             TSTTEE-CCCCCBSSEECCEECSCS---CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHH
T ss_pred             hCCCCe-eecCCeeEEEEEecCccC---CCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHH
Confidence            988888 447788889988776310   014667777776688999999988865  68999999999999999999999


Q ss_pred             HHHHHhh
Q 014631          412 AFCQRHA  418 (421)
Q Consensus       412 ~~~~~~~  418 (421)
                      ++++++.
T Consensus       398 ~~l~~~~  404 (406)
T 1xi9_A          398 KFMKERL  404 (406)
T ss_dssp             HHHHHC-
T ss_pred             HHHHHHh
Confidence            9998764

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=1.2e-47  Score=376.00  Aligned_cols=370  Identities=21%  Similarity=0.335  Sum_probs=300.3

Q ss_pred             CeeeccCCCCCCCCCCC-------------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFR-------------------------TTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~-------------------------~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia   96 (421)
                      ++|+.++|+|......|                         .|..+.+++.+.+...   ....|++..|..++|++++
T Consensus        65 ~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia  144 (500)
T 3tcm_A           65 EILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIA  144 (500)
T ss_dssp             SCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHH
T ss_pred             HhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHH
Confidence            89999999985332211                         4555666667777652   4568999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +++++++|.++++++|++|+|+++++..++.+++ ++||.|+++.|+|.++...+...|++++.++++.+++|.+|++++
T Consensus       145 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  224 (500)
T 3tcm_A          145 SGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDV  224 (500)
T ss_dssp             HHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHH
T ss_pred             HHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence            9999888888999999999999999999999998 899999999999999999999999999999998877889999999


Q ss_pred             Hhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Cccccc----cc---C
Q 014631          176 EALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMG----VF---G  241 (421)
Q Consensus       176 ~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~----~~---~  241 (421)
                      ++.+++      ++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++. ...++.    .+   .
T Consensus       225 ~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~  304 (500)
T 3tcm_A          225 KKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGE  304 (500)
T ss_dssp             HHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSS
T ss_pred             HHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcccc
Confidence            998876      688999999999999999999999999999999999999999999988643 333432    22   2


Q ss_pred             CCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc---------ch
Q 014631          242 STVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT---------KE  311 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~  311 (421)
                      ...++++++||||.| |++|+|+||+++....     +++++.+........+++.+.|.++..+++..         ..
T Consensus       305 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~  379 (500)
T 3tcm_A          305 EDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYK  379 (500)
T ss_dssp             SCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH
T ss_pred             CCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHH
Confidence            334578999999998 8899999999984211     23566666655555678899999998888631         12


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc-------ccCCCChHHHHHHHHhhcCeeEEeCC
Q 014631          312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-------LEGISDDMEFALQLAKEESVIVLPGM  384 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~~g~  384 (421)
                      .+.++++++++++++.+.+.|+++||+. +..|++++|.|+.+..+.       ..+...+..++.++++++||.+.||+
T Consensus       380 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~  458 (500)
T 3tcm_A          380 AEKDGILASLARRAKALEHAFNKLEGIT-CNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGS  458 (500)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEEST
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcE-EecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCc
Confidence            4556777889999999999999999998 458899999996654211       00111234445678888999999999


Q ss_pred             CCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631          385 AVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       385 ~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      .|+.   ..++|++++.+++++++++++|.++++++.++
T Consensus       459 ~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~~  497 (500)
T 3tcm_A          459 GFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSE  497 (500)
T ss_dssp             TTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9974   35799999988999999999999999887653

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=2e-48  Score=372.46  Aligned_cols=374  Identities=20%  Similarity=0.320  Sum_probs=304.3

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      .+..++++.++.+....+.    ..+.++|||+.|.+.    ++.++.+.+++.+.+.......|++..|..++|+++++
T Consensus        25 ~~~~~~~~~~~~~~~~~~~----~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~   96 (404)
T 2o1b_A           25 KLANIPDSYFGKTMGRKIE----HGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVD   96 (404)
T ss_dssp             HHHTSCCCTTC-------C----CCSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHH
T ss_pred             HhhhCCchHHHHHHHHHHh----cCCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Confidence            4455555555555443332    236779999999875    45678999999998865323478877889999999999


Q ss_pred             HHhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           98 YLNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        98 ~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      ++.+.+|.++++ ++|++|+|+++++..++++++++||+|+++.|+|+++...++..|.+++.++.++ +++.+|+++++
T Consensus        97 ~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~  175 (404)
T 2o1b_A           97 FYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVD  175 (404)
T ss_dssp             HHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSC
T ss_pred             HHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHH
Confidence            998877877776 7999999999999999999999999999999999999999999999999998865 56678999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKR  255 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~  255 (421)
                      +.+.++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.++|. ..++..+. ..+++++++|+||.
T Consensus       176 ~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~  254 (404)
T 2o1b_A          176 SQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK-NPSILASENGKDVAIEIYSLSKG  254 (404)
T ss_dssp             HHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC-CCCGGGSTTHHHHEEEEEESTTT
T ss_pred             HhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCCEEEEEecchh
Confidence            88877789999999999999999999999999999999999999999999887663 33333433 23567999999999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |+++|+|+||++++        +++++.+..... ...+++.+.+.++.++|+.. +.++++.+++++++++.+.+.|++
T Consensus       255 ~g~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~  325 (404)
T 2o1b_A          255 YNMSGFRVGFAVGN--------KDMIQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAK  325 (404)
T ss_dssp             TTCGGGCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCchhheEeEecC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            98899999999985        356777766543 24578889999998888753 677889999999999999999998


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                      + ++. +..|.+++|+|+.++..     .+..+++..+++++||.+.||..|+.  .+++|++++.+++++++++++|.+
T Consensus       326 ~-g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~  398 (404)
T 2o1b_A          326 A-DLP-FVHAKGGIYVWLETPPG-----YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTE  398 (404)
T ss_dssp             T-TCC-EECCCBSSEEEEECCTT-----CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHG
T ss_pred             c-CCe-ecCCCcceEEEEeCCCC-----CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHH
Confidence            7 777 44677888999998632     14567788777778999999988864  679999999888999999999998


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      +++++
T Consensus       399 ~l~~~  403 (404)
T 2o1b_A          399 LAYLY  403 (404)
T ss_dssp             GGGGG
T ss_pred             HHHhh
Confidence            87654

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=2.3e-47  Score=363.79  Aligned_cols=356  Identities=18%  Similarity=0.259  Sum_probs=306.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++|||+.|++.    +++++.+.+++.+.+.+. ...|++.  ..++++++++++++.+|.++++++|++|+|+++++
T Consensus        26 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~   98 (391)
T 3dzz_A           26 KEKELPMWIAEMD----FKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI   98 (391)
T ss_dssp             CTTCEECCSSCCS----SCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred             CCCceeccccCCC----CCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence            6789999999755    678999999999998764 3467655  68999999999999888888899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc-CCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL-PEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~  200 (421)
                      +.++.++.++||+|+++.|+|+++...++..|.+++.++++ .++.+.+|++++++.++ ++++++++++|+||||.++|
T Consensus        99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~  178 (391)
T 3dzz_A           99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS  178 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence            99999999999999999999999999999999999999885 34456789999999997 68899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      .+++++|+++|++||+++|+||+|+++.+.|....++..++.  .++++++.|+||.++++|+|+||+++++       +
T Consensus       179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~-------~  251 (391)
T 3dzz_A          179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN-------P  251 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------H
Confidence            999999999999999999999999999888766666666553  4578999999999989999999999863       3


Q ss_pred             HHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecC
Q 014631          279 RIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLN  355 (421)
Q Consensus       279 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~  355 (421)
                      ++.+.+.....  ...+++++.+.++..+++. ...++++.+++++++++++.+.|++ +|++. +..|.++++.|+.++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~  329 (391)
T 3dzz_A          252 DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDIS  329 (391)
T ss_dssp             HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEECG
T ss_pred             HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEehh
Confidence            56676665532  2347888899988888875 4577889999999999999999998 88998 557888999999887


Q ss_pred             cccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631          356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ...    .+..++...+++++||.+.||..|+.  ++++|++++++++++++++++|.+++++++
T Consensus       330 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~~  390 (391)
T 3dzz_A          330 ALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNLN  390 (391)
T ss_dssp             GGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred             hcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence            531    14677777776688999999998876  489999999999999999999999998764

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=5e-48  Score=366.56  Aligned_cols=351  Identities=19%  Similarity=0.294  Sum_probs=302.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|+++|||+.|.+.    ++.++.+.+++.+.+... ...|++ .+ .++|+++++++++.+|..+++++|++|+|++++
T Consensus        21 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a   93 (377)
T 3fdb_A           21 YGQGVLPLWVAESD----FSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG   93 (377)
T ss_dssp             SCTTSEECCSSCCC----SCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             cCCCeeeecccCCC----CCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence            38899999999755    578899999999998864 357888 77 999999999999888888889999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ++.++++++++||+|+++.|+|+++...++..|.+++.++.+++    +|++++++.++++++++++++|+||||.++|.
T Consensus        94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~  169 (377)
T 3fdb_A           94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAP  169 (377)
T ss_dssp             HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCH
T ss_pred             HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999987653    89999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCC-CCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGS-TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      +++++|+++|++||+++|+||+|+.+.++| ....++..++..++++++.|+||.++++|+|+||+++.+       +++
T Consensus       170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~  242 (377)
T 3fdb_A          170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSD  242 (377)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHH
Confidence            999999999999999999999999998877 555555554445678999999999999999999988753       457


Q ss_pred             HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCccc
Q 014631          281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSL  358 (421)
Q Consensus       281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~  358 (421)
                      .+.+..... .+.+++++.+.++.++++. .+.++++.+++++++++++.+.|++ +|++. +..|.+++++|+.++...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~  320 (377)
T 3fdb_A          243 AEHWQQLSPVIKDGASTLGLIAAEAAYRY-GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQATYLMWIDFRDTT  320 (377)
T ss_dssp             HHHHHHSCHHHHCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCE-ECCCSBCSEEEEECTTSC
T ss_pred             HHHHHHHHHhhcCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCeeEEEEEECcccC
Confidence            777766543 3457888999998888874 3577889999999999999999998 78988 557888888899887531


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                           .+.+++..+++++||.+.||..|+.  ++++|++++.+++++++++++|.++++++
T Consensus       321 -----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~  376 (377)
T 3fdb_A          321 -----IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSHH  376 (377)
T ss_dssp             -----CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred             -----CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence                 1245677777777999999998875  68999999999999999999999998653

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-47  Score=364.04  Aligned_cols=349  Identities=21%  Similarity=0.316  Sum_probs=291.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~  120 (421)
                      .|.++|||+.|.+.    ++.++.+.+++.+.+.......|++..+..++|+++++++.+.+|.+++++ +|++|+|+++
T Consensus        23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~   98 (376)
T 2dou_A           23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE   98 (376)
T ss_dssp             TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred             cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence            47889999999865    456889999999998654346787766789999999999988778777777 9999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      ++..+++++.++||+|++++|+|+++...++..|.+++.+++  ++++.+|++++++.+.++++++++++|+||||.++|
T Consensus        99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~  176 (376)
T 2dou_A           99 GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVAD  176 (376)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCC
Confidence            999999999999999999999999999999999999999887  456678999999888777899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      .+++++|+++|++||+++|+||+|+++.+++.....+...+..+++++++|+||.|+++|+|+||++++        +++
T Consensus       177 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~  248 (376)
T 2dou_A          177 WGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS--------EEA  248 (376)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC--------HHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC--------HHH
Confidence            999999999999999999999999998876632222222233457899999999998899999999985        357


Q ss_pred             HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      ++.+..... ...+++++.+.++.++|+. .+.++++.+++++++++.+.+.|+++  +. +..|.+++|+|++++..  
T Consensus       249 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~--  322 (376)
T 2dou_A          249 LARLERVKGVIDFNQYAGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLWGRLPEG--  322 (376)
T ss_dssp             HHHHHHHHHHHCCCSCHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEEEECCTT--
T ss_pred             HHHHHHHHHhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEEEECCCC--
Confidence            777766543 2346788999999999975 35778889999999999999999986  66 44677889999998742  


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                         .+..++...++++ ||.+.||..|+.  ++++|++++.+++++++++++|.+++
T Consensus       323 ---~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          323 ---VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL  375 (376)
T ss_dssp             ---CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred             ---CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence               1456777776554 999999988864  67999999988999999999998764

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.7e-47  Score=365.70  Aligned_cols=373  Identities=25%  Similarity=0.411  Sum_probs=306.7

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      ++.++++.++.+....+       ...+|+|+.|.+.    ++.++.+.+++.+.+... ...|++..|..++|++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~   74 (411)
T 2o0r_A            7 LRPYATTVFAEMSALAT-------RIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQ   74 (411)
T ss_dssp             GGGGSSCHHHHHHHHHH-------TTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred             hHhcCccHHHHHHHHhh-------cCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            44455555655554433       4568999999865    457889999999998764 45898888899999999999


Q ss_pred             HhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHH
Q 014631           99 LNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLE  176 (421)
Q Consensus        99 l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~  176 (421)
                      +.+.+|.+++++ +|++|+|+++++..++++++++||+|+++.|+|+++...+...|.+++.++.+++ +++.+|+++++
T Consensus        75 ~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~  154 (411)
T 2o0r_A           75 RRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALR  154 (411)
T ss_dssp             HHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHH
T ss_pred             HHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHH
Confidence            988888777888 9999999999999999999999999999999999999999999999999987653 34678999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKR  255 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~  255 (421)
                      +.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++|....++..++. .++++++.|+||.
T Consensus       155 ~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~  234 (411)
T 2o0r_A          155 RAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKM  234 (411)
T ss_dssp             HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHH
T ss_pred             HhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhh
Confidence            999888899999999999999999999999999999999999999999999887765555555543 4568999999999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |+++|+|+||++++        +++++.+..... ...+++++.+.++.++|+.. ..++++.+++++++++++.+.|++
T Consensus       235 ~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~  305 (411)
T 2o0r_A          235 FNCTGWKIGWACGP--------AELIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTE  305 (411)
T ss_dssp             TTCTTTCEEEEECC--------HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCccceEEEEeeC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98899999999985        356666655443 23456778888888888743 677888999999999999999998


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-------------CCCeEEEEecCCHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-------------MKNWLRITFAIEPS  401 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-------------~~~~iRi~~~~~~e  401 (421)
                      + ++. +..|.+++++|+.++...   ..+..+++..+++++||.+.||..|.             ..+++|++++.+++
T Consensus       306 ~-g~~-~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e  380 (411)
T 2o0r_A          306 I-GFA-VHDSYGTYFLCADPRPLG---YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDD  380 (411)
T ss_dssp             H-TCE-ECCCCBSSEEEEECGGGT---CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHH
T ss_pred             c-CCE-ecCCCeeEEEEEecCCCC---CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHH
Confidence            7 777 446788889999986420   01466777777777899999998772             24689999998999


Q ss_pred             HHHHHHHHHHHHHHHh
Q 014631          402 ALEEGLGRIKAFCQRH  417 (421)
Q Consensus       402 ~l~~~~~~l~~~~~~~  417 (421)
                      ++++++++|.+++++.
T Consensus       381 ~i~~~~~~l~~~~~~~  396 (411)
T 2o0r_A          381 TLDEAIRRLSVLAERP  396 (411)
T ss_dssp             HHHHHHHHHGGGGC--
T ss_pred             HHHHHHHHHHHHHhcc
Confidence            9999999999877654

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=4.5e-47  Score=361.13  Aligned_cols=349  Identities=23%  Similarity=0.377  Sum_probs=295.0

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAI  122 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al  122 (421)
                      .++|+|+.|.+.    ++.++.+.+++.+.+... ...|++..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus        30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~  104 (386)
T 1u08_A           30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL  104 (386)
T ss_dssp             TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred             CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence            578999999865    457899999999998763 35788888899999999999988888778888 999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++++++++||+|++++|+|+++...++..|.+++.++.+.+ ++.+|++++++.++++++++++++|+||||.++|.+
T Consensus       105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  183 (386)
T 1u08_A          105 YAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA  183 (386)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHH
Confidence            9999999999999999999999999999999999999987643 567999999999988889999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++++|+++|++||+++|+||+|+.+.++|....++..++ ..++++++.|+||.|+++|+|+||++++        ++++
T Consensus       184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~  255 (386)
T 1u08_A          184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP--------APIS  255 (386)
T ss_dssp             HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC--------HHHH
T ss_pred             HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcC--------HHHH
Confidence            999999999999999999999999988776544554442 2356899999999998899999999985        3566


Q ss_pred             HHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          282 DSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       282 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      +.+..... ...+++.+.+.++..+|+.. +.++++.+++++++++++.+.|+++ ++. +..|.+++|+|+.++...  
T Consensus       256 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~--  330 (386)
T 1u08_A          256 AEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS--  330 (386)
T ss_dssp             HHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC--
T ss_pred             HHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCceEEEEEecCCCC--
Confidence            76665543 23467788888888888753 5778889999999999999999987 887 446788899999886420  


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCC----CCCeEEEEecCCHHHHHHHHHHHHH
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVG----MKNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                       ..+..++...+++++||.+.||..|.    .++++|++++.+++++++++++|++
T Consensus       331 -~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~  385 (386)
T 1u08_A          331 -TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ  385 (386)
T ss_dssp             -CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred             -CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence             01466777777778899999998774    3578999999999999999998864

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.7e-47  Score=371.79  Aligned_cols=369  Identities=22%  Similarity=0.364  Sum_probs=288.7

Q ss_pred             CeeeccCCCCCCCCCCC---------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHh
Q 014631           45 PIIPLGHGDPSAFPCFR---------------------TTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIADYLN  100 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~---------------------~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia~~l~  100 (421)
                      ++|++++|+|......+                     .|..+.+++.+.+...   ....|++..|.+++|++++++++
T Consensus        64 ~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~  143 (498)
T 3ihj_A           64 EVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYIT  143 (498)
T ss_dssp             SCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHH
T ss_pred             hhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            89999999986432111                     2555566667777652   34689999999999999999999


Q ss_pred             hhCC-CCCCCCcEEEcCCHHHHHHHHHHHhcCCCC----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631          101 SELP-CKLSPDDVYLTAGCKQAIQVILTVLARPGA----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus       101 ~~~~-~~~~~~~i~~~~g~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +++| +++++++|++|+|+++++..++++++++||    .|+++.|+|..+...+...|++++.++++.+++|++|++++
T Consensus       144 ~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l  223 (498)
T 3ihj_A          144 RRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNEL  223 (498)
T ss_dssp             HHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHH
T ss_pred             HhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHH
Confidence            8884 888999999999999999999999998875    99999999999999999999999999998877899999999


Q ss_pred             Hhhhcc-----CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-CcccccccC--------
Q 014631          176 EALADE-----NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMGVFG--------  241 (421)
Q Consensus       176 ~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~--------  241 (421)
                      ++.+++     +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++. .+.++..+.        
T Consensus       224 e~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~  303 (498)
T 3ihj_A          224 RRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS  303 (498)
T ss_dssp             HHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHH
T ss_pred             HHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhccccc
Confidence            998876     588999999999999999999999999999999999999999999998754 444444321        


Q ss_pred             CCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc-----c-h---
Q 014631          242 STVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT-----K-E---  311 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~-~---  311 (421)
                      ...++++++||||.| |.+|+|+||+++....     +++++.+........+++.+.|.++..+++..     . .   
T Consensus       304 ~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~-----~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~  378 (498)
T 3ihj_A          304 SNVELASFHSTSKGYMGECGYRGGYMEVINLH-----PEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFS  378 (498)
T ss_dssp             TTCCEEEEEESSSSTTCCSSSCCEEEEEESCC-----HHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHH
T ss_pred             CceeEEEEeccccccccCcccceEEEEEecCC-----HHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHH
Confidence            233578999999999 7799999999852111     45777776665555678889999988888631     1 1   


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc-------cCCCChHH-HHHHHHhhcCeeEEeC
Q 014631          312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL-------EGISDDME-FALQLAKEESVIVLPG  383 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~ll~~~gv~v~~g  383 (421)
                      ....+.+++++++++.+.+.|+++||+. +..|.+++|+|++++.+..       .+. ++.+ ++.++++++||.+.||
T Consensus       379 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~p~gg~~~~~~l~~p~~~~~~~~~~g~-~~~~~~~~~ll~~~gI~v~pG  456 (498)
T 3ihj_A          379 REKESVLGNLAKKAKLTEDLFNQVPGIH-CNPLQGAMYAFPRIFIPAKAVEAAQAHQM-APDMFYCMKLLEETGICVVPG  456 (498)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECCCHHHHHHHHHTTS-CHHHHHHHHHHHHHCBCCEEG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcE-ecCCCeEEEEEEeccCchhhhHHHHhcCC-CcHHHHHHHHHHHCCEEEEeC
Confidence            2345667889999999999999999998 4589999999987642110       011 2333 3677888899999999


Q ss_pred             CCCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631          384 MAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       384 ~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      +.|+.   ..++|++++.+++++++++++|.++++++.++
T Consensus       457 ~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~~  496 (498)
T 3ihj_A          457 SGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEK  496 (498)
T ss_dssp             GGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99974   35899999989999999999999999887654

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=7e-47  Score=361.45  Aligned_cols=357  Identities=18%  Similarity=0.276  Sum_probs=298.8

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      .++++|+.|.+.    +++++.+.+++.+.+... ...|++.  ..++|+++++++++.+|.++++++|++|+|+++++.
T Consensus        31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~  103 (399)
T 1c7n_A           31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF  103 (399)
T ss_dssp             TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred             CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence            589999999854    567899999999998753 3477654  799999999999887777778899999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC-CccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK-GWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~  201 (421)
                      .+++++.++||+|+++.|+|+++...+...|.+++.++.++++ .|.+|++++++.++ ++++++++++|+||||.++|.
T Consensus       104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~  183 (399)
T 1c7n_A          104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK  183 (399)
T ss_dssp             HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred             HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence            9999999999999999999999999999999999998875333 46689999999887 678899999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      +++++|+++|++||+++|+||+|+.+.++|....++..++.  .++++++.|+||.|+++|+|+||+++++       ++
T Consensus       184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~  256 (399)
T 1c7n_A          184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------PD  256 (399)
T ss_dssp             HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------HH
Confidence            99999999999999999999999999887765555655543  4578999999999988999999999863       34


Q ss_pred             HHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCc
Q 014631          280 IVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       280 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      +++.+......  .++++++.+.++.++++.. ..++++.+++++++++++.+.|++ +|++. +..+.+++++|+.++.
T Consensus       257 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~  334 (399)
T 1c7n_A          257 IRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDFRA  334 (399)
T ss_dssp             HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEECGG
T ss_pred             HHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCe-EecCCceEEEEEEccc
Confidence            66666655432  2367889999888888743 577888899999999999999998 88988 4478888888998864


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCC--CCCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVG--MKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      ..    .+..++...+++++||.+.||..|+  .++++|++++.+++++++++++|.++++++.++
T Consensus       335 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~~  396 (399)
T 1c7n_A          335 LK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKNR  396 (399)
T ss_dssp             GC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC--
T ss_pred             CC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHhc
Confidence            21    1466777777657899999998886  367999999977899999999999999887653

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=5e-47  Score=368.01  Aligned_cols=383  Identities=18%  Similarity=0.237  Sum_probs=304.4

Q ss_pred             hHHhhhhhh-hHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCCHHH
Q 014631           17 EHITATATL-TVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS----AEFDCYSPSVGILPA   91 (421)
Q Consensus        17 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~l   91 (421)
                      ..+..+++. ..+.+..+......+..+.++|+|+.|++.    ++.++.+.+++.+++..    .....|++..|..+|
T Consensus        41 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l  116 (449)
T 3qgu_A           41 ENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTT----EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGAL  116 (449)
T ss_dssp             HHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHH
T ss_pred             HHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCCC----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHH
Confidence            345555553 334555555544444458899999999855    57899999999999874    344589888999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCce----------eEeee
Q 014631           92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE----------IRHFD  161 (421)
Q Consensus        92 ~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~----------~~~~~  161 (421)
                      |+++++++.  +|+++++++|++|+|+++++..+ ..++++||+|++++|+|+++...++..|.+          ++.++
T Consensus       117 r~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~  193 (449)
T 3qgu_A          117 REAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMV  193 (449)
T ss_dssp             HHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEE
T ss_pred             HHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEe
Confidence            999999997  77778899999999999999998 788899999999999999999999999988          89999


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      ++.++++..+++++     ++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++....++..++
T Consensus       194 ~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~  268 (449)
T 3qgu_A          194 CNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIP  268 (449)
T ss_dssp             CCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGST
T ss_pred             cccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhcc
Confidence            87665655555432     5788999999999999999999999999999999999999999999998876555666654


Q ss_pred             C-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          242 S-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       242 ~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      . .++++++.||||.|+++|+|+||+++++.........+...+.... ..+.+++++.+.++.+++......++++.++
T Consensus       269 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  348 (449)
T 3qgu_A          269 GADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIK  348 (449)
T ss_dssp             TGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred             CCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHH
Confidence            4 4568999999999999999999999965321100000111222222 2344788899999988887533467888999


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA  397 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~  397 (421)
                      +++++++++.+.|+++ |+. +..|.+++|+|+.++ .     .++.+++..+++++||.+.||..|+.  .+++||++.
T Consensus       349 ~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~-~-----~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~  420 (449)
T 3qgu_A          349 FYKENAQILKTTFTEM-GFS-VYGGDDAPYIWVGFP-G-----KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF  420 (449)
T ss_dssp             HHHHHHHHHHHHHHHT-TCC-EEESSSSSEEEEECT-T-----SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC
T ss_pred             HHHHHHHHHHHHHHHC-CCe-eeCCCCeeEEEEECC-C-----CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec
Confidence            9999999999999988 887 446778999999987 2     15678888888878999999998875  589999998


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhh
Q 014631          398 IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .+++++++++++|++++++...
T Consensus       421 ~~~e~i~~~l~~l~~~~~~~~~  442 (449)
T 3qgu_A          421 GSRENILEAVRRFKEAYGKRNA  442 (449)
T ss_dssp             SCHHHHHHHHHHHHHHHC----
T ss_pred             CCHHHHHHHHHHHHHHHHhcCc
Confidence            8999999999999999876543

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=2e-47  Score=368.61  Aligned_cols=358  Identities=23%  Similarity=0.375  Sum_probs=299.0

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ  120 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~  120 (421)
                      .++|+|+.|.+.    ++.++.+.+++.+++...  ....|++..|..++++++++++.+.+|.+++++ +|++|+|+++
T Consensus        37 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~  112 (429)
T 1yiz_A           37 YKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYE  112 (429)
T ss_dssp             HCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred             CCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHH
Confidence            578999999865    457899999999998752  235788878899999999999988778777888 9999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC--------CccCCHHHHHhhhccCceEEEEeCCC
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK--------GWEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~--------~~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      ++..++++++++||+|+++.|+|+++...++..|.+++.++.+.++        ++.+|++++++.++++++++++++|+
T Consensus       113 a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~  192 (429)
T 1yiz_A          113 ALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPH  192 (429)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSC
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCC
Confidence            9999999999999999999999999999999999999999986543        56799999999998888999999999


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      ||||.++|.+++++|+++|++||+++|+||+|+++.++|....++..++ ..++++++.|+||.|+++|+|+||++++  
T Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~--  270 (429)
T 1yiz_A          193 NPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGP--  270 (429)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESC--
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeC--
Confidence            9999999999999999999999999999999999988776555555553 3457899999999998899999999985  


Q ss_pred             CcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc-----cc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          272 SGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN-----TK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-----~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                            +++++.+..... .+.+++++.+.++.++|+.     .. +.++++.+++++++++.+.+.|+++ ++. +..|
T Consensus       271 ------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~  342 (429)
T 1yiz_A          271 ------EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN-PTVP  342 (429)
T ss_dssp             ------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEEC
T ss_pred             ------HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCC
Confidence                  356676665542 3457788899988888875     32 5678889999999999999999987 777 4467


Q ss_pred             CceeEEEEecCcccc-------cCCCChHHHHHHHHhhcCeeEEeCCCCCC-------CCeEEEEecCCHHHHHHHHHHH
Q 014631          345 EGSMFVMVKLNLSLL-------EGISDDMEFALQLAKEESVIVLPGMAVGM-------KNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                      .+|+|+|++++....       .+..+..+++.++++++||.+.||..|..       ++++|++++.+++++++++++|
T Consensus       343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l  422 (429)
T 1yiz_A          343 QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEIL  422 (429)
T ss_dssp             SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHH
T ss_pred             CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHH
Confidence            788999999874200       00013456777777788999999987753       5799999999999999999999


Q ss_pred             HHHHH
Q 014631          411 KAFCQ  415 (421)
Q Consensus       411 ~~~~~  415 (421)
                      .++++
T Consensus       423 ~~~l~  427 (429)
T 1yiz_A          423 RKWKG  427 (429)
T ss_dssp             HHHSC
T ss_pred             HHhcc
Confidence            98764

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=3.3e-47  Score=360.77  Aligned_cols=359  Identities=19%  Similarity=0.329  Sum_probs=297.2

Q ss_pred             hhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhh
Q 014631           23 ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSE  102 (421)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~  102 (421)
                      +++.++++...+++ ... .+ ++|||+.|.+.    ++.|+.+.+++.+.+..  ...|++..|..++|+++++++.+.
T Consensus         5 ~~~~~~~~~~~~~~-~~~-~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~   75 (376)
T 3ezs_A            5 EPYPFERLRALLKE-ITP-KK-RGLDLGIGEPQ----FETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRR   75 (376)
T ss_dssp             CCCHHHHHHHHHTT-CCC-SS-CCCBCSSCCCC----SCCCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHh-hhc-cC-CEEEeCCCCCC----CCCCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHH
Confidence            35566677665543 322 35 99999999865    56789999999988733  458988889999999999999988


Q ss_pred             CCCCCCCCcEEEcCCHHHHHHHHHHHhcCC--CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc
Q 014631          103 LPCKLSPDDVYLTAGCKQAIQVILTVLARP--GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD  180 (421)
Q Consensus       103 ~~~~~~~~~i~~~~g~~~al~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~  180 (421)
                      +|..+++++|++|+|+++++..++++++++  ||+|+++.|+|+++...++..|.+++.+++++++++  ++ ++++.+.
T Consensus        76 ~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~-~l~~~~~  152 (376)
T 3ezs_A           76 FKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDF--TP-SLNEKEL  152 (376)
T ss_dssp             HSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTS--CC-CCCHHHH
T ss_pred             hCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCc--ch-hHHhhhc
Confidence            887778999999999999999999999999  999999999999999999999999999998765443  33 5666666


Q ss_pred             cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-----CCCCEEEEcccccc
Q 014631          181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-----STVPVITLGSMSKR  255 (421)
Q Consensus       181 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~  255 (421)
                      ++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++.....+...+     ..++++++.|+||.
T Consensus       153 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  232 (376)
T 3ezs_A          153 QEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKR  232 (376)
T ss_dssp             HHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTT
T ss_pred             cCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhc
Confidence            6789999999999999999999999999999999999999999999988774332222211     45678999999999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      ||++|+|+||++++        +++++.+..... ...+++++.+.++.++++.  ..++++.+++++++++.+.+.|+ 
T Consensus       233 ~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~-  301 (376)
T 3ezs_A          233 SSAPGLRSGFIAGD--------SRLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK-  301 (376)
T ss_dssp             TTCGGGCCEEEEEC--------HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST-
T ss_pred             cCCccceeEEEeeC--------HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc-
Confidence            98999999999985        467777776644 2457888999999999875  45688889999999999999987 


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----CCCeEEEEecCCHHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----MKNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                        ++.   .|.+++|+|+.++        +..++...+++++||.+.||..|+    ..+++|++++.+++++++++++|
T Consensus       302 --~~~---~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l  368 (376)
T 3ezs_A          302 --NTL---IYPYSFYVYLPVQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEII  368 (376)
T ss_dssp             --TCC---CCSBSSEEEEECS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHH
T ss_pred             --CCC---CCCcceEEEEECC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHH
Confidence              443   5788999999886        366777777665899999999887    35899999988999999999999


Q ss_pred             HHHHHHh
Q 014631          411 KAFCQRH  417 (421)
Q Consensus       411 ~~~~~~~  417 (421)
                      .++++++
T Consensus       369 ~~~l~~~  375 (376)
T 3ezs_A          369 ETYRENH  375 (376)
T ss_dssp             HHHHCC-
T ss_pred             HHHHHhc
Confidence            9988653

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.9e-46  Score=358.16  Aligned_cols=378  Identities=23%  Similarity=0.373  Sum_probs=308.9

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ..++.++++.++++...+++..  ..++++++|+.|.+.    ++.++.+.+++ +.+... ...|++..|..++|++++
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~la   89 (409)
T 2gb3_A           18 DRVLLTEESPIRKLVPFAEMAK--KRGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAFA   89 (409)
T ss_dssp             HHHHSCCCCTTGGGHHHHHHHH--HTTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHHH
T ss_pred             HHhhcCCccHHHHHHHHHHHHH--hcCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHHH
Confidence            3466666777777666554332  237889999999875    45678899999 887653 357888888999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      ++++..+|+++++++|++|+|+++++..+++++.++||+|+++.|+|+++...++..|.+++.++.++++++.+ +++++
T Consensus        90 ~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~  168 (409)
T 2gb3_A           90 SYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLE  168 (409)
T ss_dssp             HHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGG
T ss_pred             HHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHH
Confidence            99999888888889999999999999999999999999999999999999999999999999998865445555 88999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      +.+.++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++.....+..+  .+++++++|+||.|
T Consensus       169 ~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~  246 (409)
T 2gb3_A          169 SFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIE--SDKVVVIDSVSKKF  246 (409)
T ss_dssp             GGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSC--CTTEEEEEESTTTT
T ss_pred             HhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccC--CCCEEEEecchhcc
Confidence            9888888999999999999999999999999999999999999999999988766322112211  34679999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      +++|+|+||+++++       +++.+.+........+++++.+.++.++|+. ...++++.+++++++++.+.+.|+++ 
T Consensus       247 g~~G~r~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-  317 (409)
T 2gb3_A          247 SACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEH-  317 (409)
T ss_dssp             TCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCccceEEEEEECc-------HHHHHHHHHHHhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence            88999999999863       2466666554432117788999999888864 36778888999999999999999988 


Q ss_pred             CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhh-----cCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE-----ESVIVLPGMAVGM-----KNWLRITFAIEPSALEEG  406 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~  406 (421)
                      ++.++..|.+++++|+.++.      .+..++...++++     +||.+.||..|+.     ++++|+++++++++++++
T Consensus       318 g~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~  391 (409)
T 2gb3_A          318 GLKRFTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRA  391 (409)
T ss_dssp             TCCCBCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHH
T ss_pred             CceeeeCCCeeEEEEEEeCC------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHH
Confidence            88741478888999988861      1466777777655     5999999987753     579999999999999999


Q ss_pred             HHHHHHHHHHhhhc
Q 014631          407 LGRIKAFCQRHAKQ  420 (421)
Q Consensus       407 ~~~l~~~~~~~~~~  420 (421)
                      +++|+++++++++.
T Consensus       392 ~~~l~~~l~~~~~~  405 (409)
T 2gb3_A          392 IDVLMEGLKMFCSS  405 (409)
T ss_dssp             HHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhhhc
Confidence            99999999887654

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=3e-47  Score=366.73  Aligned_cols=375  Identities=21%  Similarity=0.289  Sum_probs=299.0

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHH---------HHHHhcCCCCCCCCCCC
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAV---------VDAVRSAEFDCYSPSVG   87 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~---------~~~~~~~~~~~y~~~~g   87 (421)
                      ..++.++++.++.+....++.     ++++|+|+.|.|+... +|. .....++         .+....  ...|++..|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~p~~~~-~p~-~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G   79 (425)
T 2r2n_A            9 AASAARNPSPIRTMTDILSRG-----PKSMISLAGGLPNPNM-FPF-KTAVITVENGKTIQFGEEMMKR--ALQYSPSAG   79 (425)
T ss_dssp             HHHHTCCCCSGGGHHHHHHHS-----CTTCEECCCCCCCGGG-CSE-EEEEEEETTSCCEEECHHHHHH--HTSCCCTTC
T ss_pred             HHHhcCCCchHHHHHHHhhcC-----CCCeEEcCCcCCCchh-CCH-HHHHHHHhhcccccccccchhh--hcCCCCCCC
Confidence            567777888888888766531     3678999999987321 121 1000000         011111  147999999


Q ss_pred             CHHHHHHHHHHHhhhCCCCCC-------CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEee
Q 014631           88 ILPARRAIADYLNSELPCKLS-------PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHF  160 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~-------~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~  160 (421)
                      ++++|+++++++.+.+|...+       +++|++|+|+++++.+++++++++||+|++++|+|+++...++..|.+++.+
T Consensus        80 ~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v  159 (425)
T 2r2n_A           80 IPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINV  159 (425)
T ss_dssp             CHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEE
T ss_pred             CHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe
Confidence            999999999999988887663       3799999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCccCCHHHHHhhhc------------cCceEEEE-eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALAD------------ENTVAMVI-VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL  227 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~------------~~~~~i~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~  227 (421)
                      +++.   .++|++++++.++            ++++++++ ++||||||.++|.+++++|+++|++||+++|+||+|+++
T Consensus       160 ~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~  236 (425)
T 2r2n_A          160 ASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFL  236 (425)
T ss_dssp             CEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred             CcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccc
Confidence            8753   2589999999876            35677755 688999999999999999999999999999999999999


Q ss_pred             ccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHh
Q 014631          228 TFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIF  306 (421)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l  306 (421)
                      .++|....++..++..+++++++||||+|+ +|+|+||++++        +++++.+..... ...+++.+.|.++.++|
T Consensus       237 ~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l  307 (425)
T 2r2n_A          237 QFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP--------KPLIERVILHIQVSTLHPSTFNQLMISQLL  307 (425)
T ss_dssp             BSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE--------HHHHHHHHHHHHTTTCSSCHHHHHHHHHHH
T ss_pred             cCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC--------HHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence            888766666666766678999999999997 99999999996        357777766543 34578899999999888


Q ss_pred             hccc----hhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE
Q 014631          307 KNTK----EDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL  381 (421)
Q Consensus       307 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  381 (421)
                      +...    ..++++.+++++++++.+.+.|++ +|++..+..|.+|+|+|+.++..     .+..+++..++.++||.+.
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----~~~~~~~~~~l~~~gv~v~  382 (425)
T 2r2n_A          308 HEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----NDVKELIEEKAVKMGVLML  382 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----SCCHHHHHTHHHHTTEECE
T ss_pred             HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----CCHHHHHHHHHHHCCcEEe
Confidence            7521    366788889999999999999987 67763244788999999999742     1345554556678899999


Q ss_pred             eCCCCCC-----CCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631          382 PGMAVGM-----KNWLRITFA-IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       382 ~g~~~~~-----~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ||..|+.     .+++|++++ .+++++++++++|.+++++.
T Consensus       383 pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~  424 (425)
T 2r2n_A          383 PGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES  424 (425)
T ss_dssp             EGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence            9998864     478999998 89999999999999998764

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=4.3e-46  Score=354.93  Aligned_cols=351  Identities=21%  Similarity=0.342  Sum_probs=300.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++++|+.|++.    +++++.+.+++.+.+... ...|++  +..++++++++++.+.+|..+++++|++|+|+++++
T Consensus        31 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~  103 (391)
T 4dq6_A           31 TNDLLPMWVADMD----FKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI  103 (391)
T ss_dssp             CSCSEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCceeccccCCC----CCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence            6889999999855    678899999999998763 345654  468999999999999888778899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc--CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL--PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      +.++.+++++||+|+++.|+|+++...++..|.+++.++++  .++++.+|++++++.+++ ++++++++|+||||.++|
T Consensus       104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~  182 (391)
T 4dq6_A          104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT  182 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence            99999999999999999999999999999999999999987  445677999999999987 899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      .+++++|+++|++||+++|+||+|+++.++|....++..++.  .++++++.|+||.++++|+|+||+++++       +
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~  255 (391)
T 4dq6_A          183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD-------E  255 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------H
Confidence            999999999999999999999999999988776666666554  3678999999999989999999999864       3


Q ss_pred             HHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecC
Q 014631          279 RIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLN  355 (421)
Q Consensus       279 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~  355 (421)
                      ++.+.+.....  .+++++++.+.++..+++. .+.++++.+++++++++.+.+.|++ +|++. +..+.++++.|+.++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~  333 (391)
T 4dq6_A          256 KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK-VRKPEGTYLLWVDFS  333 (391)
T ss_dssp             HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCSBSSEEEEECG
T ss_pred             HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCCccEEEEEEhh
Confidence            46666665532  2347888899988888875 4567888999999999999999997 78988 557888899999887


Q ss_pred             cccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      ...    .+..++...|++++||.+.||..|+.  ++++|++++++++++++++++|.+++
T Consensus       334 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          334 ALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI  390 (391)
T ss_dssp             GGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             hcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            421    14677777776555999999988875  48999999999999999999999876

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=8.1e-46  Score=350.46  Aligned_cols=361  Identities=25%  Similarity=0.436  Sum_probs=301.1

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      .++..+++.++++....++..  ..+.++|+|+.|.+.    ++.++.+.+++.+.+... ...|++..|..++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~   77 (370)
T 2z61_A            5 RLLNFESFEVMDILALAQKLE--SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISE   77 (370)
T ss_dssp             HHHHCCCCTTHHHHHHHHHHH--HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHH
T ss_pred             hhhhccccHHHHHHHHHHHHH--hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHH
Confidence            355566777888777665432  237889999999875    345789999999998764 3578888889999999999


Q ss_pred             HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      ++++.+|..+++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++        +|++++++
T Consensus        78 ~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~  149 (370)
T 2z61_A           78 LYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEE  149 (370)
T ss_dssp             HHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHH
T ss_pred             HHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHH
Confidence            9999888888899999999999999999999999999999999999999999999999988876        58999999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~  256 (421)
                      .++++++++++++|+||||.+++.+    |.++|++||+++|+||+|+.+.++|. ..++..++ ..+++++++|+||.+
T Consensus       150 ~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~  224 (370)
T 2z61_A          150 ALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSKLY  224 (370)
T ss_dssp             HCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTTTT
T ss_pred             hcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChhcc
Confidence            9988889999999999999999977    89999999999999999999887663 33444442 345789999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+|+||++++        +++.+.+..... ...+++++.+.++.++|+.....++++.+++++++++++.+.|+++
T Consensus       225 ~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  296 (370)
T 2z61_A          225 AMTGWRIGYVISN--------DEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF  296 (370)
T ss_dssp             TCGGGCCEEEECC--------HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCccceEEEEEEC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            8899999999986        356777766543 2357888999998888864125678888999999999999999988


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                       |+. +..|.+++++|+.++.       +..++...+++++||.+.||..|+.  .+++|++++++++++++++++|.++
T Consensus       297 -g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~  367 (370)
T 2z61_A          297 -GWE-VNNPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEF  367 (370)
T ss_dssp             -TCB-CCCCCBTTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHHHH
T ss_pred             -CCe-ecCCCcceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence             887 4467888899988863       3567777776678999999988874  6799999999999999999999988


Q ss_pred             HH
Q 014631          414 CQ  415 (421)
Q Consensus       414 ~~  415 (421)
                      ++
T Consensus       368 l~  369 (370)
T 2z61_A          368 LN  369 (370)
T ss_dssp             HC
T ss_pred             Hh
Confidence            74

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=4.6e-46  Score=354.66  Aligned_cols=353  Identities=19%  Similarity=0.309  Sum_probs=293.0

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH-HHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILP-ARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~-l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      .++|+|+.|.+.    +++++.+.+++.+.+... ...|++.  ..+ +|+++++++++.+|..+++++|++|+|+++++
T Consensus        28 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al  100 (390)
T 1d2f_A           28 ADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV  100 (390)
T ss_dssp             --CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred             CCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence            478999999864    567899999999998653 3477664  678 99999999998888778899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC-CccCCHHHHHhhhcc-CceEEEEeCCCCCcccccC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK-GWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~  200 (421)
                      +.++++++++||+|+++.|+|+++...++..|.+++.++.++++ +|.+|++++++.+++ +++++++++|+||||.++|
T Consensus       101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~  180 (390)
T 1d2f_A          101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT  180 (390)
T ss_dssp             HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence            99999999999999999999999999999999999999886543 467899999998875 7888989999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      .+++++|+++|++||+++|+||+|+++.++|....++..++..-.-. +.|+||.|+++|+|+||+++++       +++
T Consensus       181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~-------~~~  252 (390)
T 1d2f_A          181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN-------SSS  252 (390)
T ss_dssp             TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS-------HHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC-------HHH
Confidence            99999999999999999999999999988776555555554321013 8899999988999999999863       346


Q ss_pred             HHHHhhhcc--c-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCc
Q 014631          281 VDSIKGYLN--I-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       281 ~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      .+.+.....  . +.+++++.+.++.++++. ...++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~  330 (390)
T 1d2f_A          253 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRP  330 (390)
T ss_dssp             HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGG
T ss_pred             HHHHHHHHhhhcccCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEccc
Confidence            666655443  2 237788888888888874 3567888899999999999999998 78888 4477888888998864


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ..    .+..++...+++++||.+.||..|+.  ++++|++++.+++++++++++|.++++++
T Consensus       331 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~  389 (390)
T 1d2f_A          331 LN----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAV  389 (390)
T ss_dssp             GC----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred             cC----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence            21    14667777776578999999988863  57999999988999999999999998775

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=9.7e-47  Score=363.26  Aligned_cols=374  Identities=18%  Similarity=0.266  Sum_probs=302.5

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia   96 (421)
                      ++.++.+.++.+...       ..++++|||+.|.|..  ...+++.+.+++.+.++..  ....|++..|..++|++++
T Consensus        25 ~~~~~~~~~~~~~~~-------~~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la   95 (425)
T 1vp4_A           25 GQNMKSSIIREILKF-------AADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQIL   95 (425)
T ss_dssp             HHTCCCCCHHHHTTT-------TTSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHH
T ss_pred             hhcCCCcHHHHHHHh-------ccCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHH
Confidence            334444555554432       1257899999998762  2346788999999988753  1357888889999999999


Q ss_pred             HHHhhhCCCC-CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631           97 DYLNSELPCK-LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus        97 ~~l~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +++.+++|.. +++++|++|+|+++++..++++++++||+|++++|+|+++...+...|.+++.++.+++   ++|++++
T Consensus        96 ~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l  172 (425)
T 1vp4_A           96 KLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVL  172 (425)
T ss_dssp             HHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHH
T ss_pred             HHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHH
Confidence            9997766766 77899999999999999999999999999999999999999999999999999988642   4899999


Q ss_pred             Hhhhcc--------CceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631          176 EALADE--------NTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV  246 (421)
Q Consensus       176 ~~~~~~--------~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  246 (421)
                      ++.+++        ++++| ++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.++|....++..++..+++
T Consensus       173 ~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~  252 (425)
T 1vp4_A          173 ERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERV  252 (425)
T ss_dssp             HHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTE
T ss_pred             HHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCE
Confidence            998865        67777 478999999999999999999999999999999999999998877655555555555678


Q ss_pred             EEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHH
Q 014631          247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDT  324 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~  324 (421)
                      ++++||||.|+ +|+|+||++++        +++++.+..... ...+++++.+.++.++|+... +.++++.+++++++
T Consensus       253 i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  323 (425)
T 1vp4_A          253 VLLNTFSKVLA-PGLRIGMVAGS--------KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRK  323 (425)
T ss_dssp             EEEEESTTTTC-GGGCEEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHH
T ss_pred             EEEeccccccc-cccceEEEeeC--------HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            99999999998 99999999985        356676665543 234678899999999987532 56778888999999


Q ss_pred             HHHHHHHhhc-CC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEe
Q 014631          325 ADICYDRIKE-IP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITF  396 (421)
Q Consensus       325 ~~~~~~~l~~-~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~  396 (421)
                      ++.+.+.|++ .|   ++. +..|.+|+|+|+.++..     .+..+++..++++ ||.+.||..|+.    .+++|+++
T Consensus       324 ~~~l~~~L~~~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~  396 (425)
T 1vp4_A          324 RTVMLNALEEYFSDIPGVK-WVKSEGGLFIWLTLPEG-----FDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSF  396 (425)
T ss_dssp             HHHHHHHHHHHSTTSTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEEC
T ss_pred             HHHHHHHHHHhCCCCCceE-EecCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEe
Confidence            9999999987 35   577 44688899999998742     1345667766554 999999988753    57899999


Q ss_pred             cC-CHHHHHHHHHHHHHHHHHhhhc
Q 014631          397 AI-EPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       397 ~~-~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      +. +++++++++++|.++++++.++
T Consensus       397 ~~~~~e~i~~~l~~l~~~l~~~~~~  421 (425)
T 1vp4_A          397 CLPPDEKIVEGIKRLREVVLEYGKE  421 (425)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            94 7999999999999999887654

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=2e-46  Score=360.60  Aligned_cols=353  Identities=18%  Similarity=0.277  Sum_probs=302.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++++|+.|++.    ++.++.+.+++.+++... ...|++.  ..++++++++++.+.+|.++++++|++|+|+++|+
T Consensus        60 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~  132 (421)
T 3l8a_A           60 NPELLQMWVADMD----FLPVPEIKEAIINYGREH-IFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI  132 (421)
T ss_dssp             CTTCEECCSSCCC----SCCCHHHHHHHHHHHHHC-CSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCeeecccCCCC----CCCCHHHHHHHHHHHhcC-CcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence            6799999999755    678999999999998764 3467654  38999999999999888888899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc-CCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL-PEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~  200 (421)
                      +.+++++.++||+|+++.|+|+++...+...|.+++.++++ .+.++.+|++++++.++ ++++++++++|+||||.+++
T Consensus       133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~  212 (421)
T 3l8a_A          133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD  212 (421)
T ss_dssp             HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999986 45567789999999987 78999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      .+++++|+++|++||+++|+||+|+++.++|....++..+..  .++++++.|+||+|+++|+|+||+++++       +
T Consensus       213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~-------~  285 (421)
T 3l8a_A          213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN-------E  285 (421)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------H
Confidence            999999999999999999999999999988876666666544  4678999999999988999999999863       3


Q ss_pred             HHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631          279 RIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       279 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      ++.+.+.....  .+++++++++.++.++++. .+.++++..++++++++++.+.|+++|++. +..|.++++.|+.++.
T Consensus       286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~-~~~~~~~~~~~v~~~~  363 (421)
T 3l8a_A          286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIK-VMEPEGTYLVWLDFSA  363 (421)
T ss_dssp             HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCE-EECCSBSSEEEEECGG
T ss_pred             HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EeCCCeeEEEEEeccc
Confidence            56666665542  2347889999999888874 467789999999999999999999878888 4478889999999875


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      ..    .+..++...+++++||.+.+|..|+.  .+++|++++++++++++++++|.++++
T Consensus       364 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          364 YA----IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             GT----CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred             cC----CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence            21    13557777776778999999998865  689999999999999999999998865

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=1.4e-45  Score=353.31  Aligned_cols=378  Identities=20%  Similarity=0.318  Sum_probs=306.3

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia   96 (421)
                      ++.++++.++.++...++.  ...|.++|||+.|.|..  ...+++.+.+++.+++.+.  ... |++..|..++|++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~--~~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la   85 (407)
T 2zc0_A           11 ANWIKGSALADVMKKASEL--QKKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELA   85 (407)
T ss_dssp             GGGCCCCHHHHHHHHHHHH--HHSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHH
T ss_pred             hccCCchHHHHHHHhhhcc--cCCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHH
Confidence            4445566677777655421  11366899999998763  2346789999999988763  234 888889999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      +++.+.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...+...|.+++.++.+++   ++|+++++
T Consensus        86 ~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~  162 (407)
T 2zc0_A           86 AFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---GMRVDLLE  162 (407)
T ss_dssp             HHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHH
T ss_pred             HHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---CCCHHHHH
Confidence            999887887778899999999999999999999999999999999999999999999999999987542   38999999


Q ss_pred             hhhc----c--CceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          177 ALAD----E--NTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       177 ~~~~----~--~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      +.++    +  ++++| ++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..++..++++++
T Consensus       163 ~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  242 (407)
T 2zc0_A          163 EKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA  242 (407)
T ss_dssp             HHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEE
T ss_pred             HHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEE
Confidence            9887    5  67776 467899999999999999999999999999999999999988877655556666555678999


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccc-h-hHHHHHHHHHHHHHH
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTK-E-DFFSKIVDILRDTAD  326 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~  326 (421)
                      +|+||.++ +|+|+||++++        +++++.+...... ..+++++.+.++..+++... + .++++.+++++++++
T Consensus       243 ~s~sK~~~-~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  313 (407)
T 2zc0_A          243 GTLSKVLG-TGFRIGWIIAE--------GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRD  313 (407)
T ss_dssp             EESTTTTC-TTSCCEEEECC--------HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHH
T ss_pred             cccccccC-CCcceEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence            99999998 99999999985        3566776655432 34568889999888887532 3 567778888999999


Q ss_pred             HHHHHhhc-CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecC-CH
Q 014631          327 ICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAI-EP  400 (421)
Q Consensus       327 ~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~-~~  400 (421)
                      ++.+.|++ .|++. +..|.+++|+|+.++..     .+..++...+++++||.+.||..|..    .+++|++++. ++
T Consensus       314 ~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~  387 (407)
T 2zc0_A          314 IMLKALENHLPNAE-FTKPIAGMFVMFFLPEG-----ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSK  387 (407)
T ss_dssp             HHHHHHHHHCTTSC-BCCCSBSSEEEEECSTT-----CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCT
T ss_pred             HHHHHHHHhCCCCE-EecCCCcEEEEEEcCCC-----CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCH
Confidence            99999987 57777 44678889999998642     14667777776555999999988753    5789999984 78


Q ss_pred             HHHHHHHHHHHHHHHHhhh
Q 014631          401 SALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       401 e~l~~~~~~l~~~~~~~~~  419 (421)
                      +++++++++|.++++++.+
T Consensus       388 ~~i~~~~~~l~~~l~~~~~  406 (407)
T 2zc0_A          388 EEIPIGIKKLAKLYKEKFG  406 (407)
T ss_dssp             THHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            9999999999999987654

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=3.7e-46  Score=360.14  Aligned_cols=379  Identities=18%  Similarity=0.283  Sum_probs=296.6

Q ss_pred             hHHhhhhhh-hHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCCHHH
Q 014631           17 EHITATATL-TVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS----AEFDCYSPSVGILPA   91 (421)
Q Consensus        17 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~l   91 (421)
                      ..+.++++. ..+.+..+......+..+.++|+|++|++.    ++.++.+.+++.+++..    .....|++..|..++
T Consensus        28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l  103 (432)
T 3ei9_A           28 SNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPL  103 (432)
T ss_dssp             HHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHH
T ss_pred             hHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHH
Confidence            345555553 556666655555444457799999999866    58899999999999874    233578888899999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCc------------eeEe
Q 014631           92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRL------------EIRH  159 (421)
Q Consensus        92 ~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~  159 (421)
                      ++++++|+.+  ++++++++|++|+|+++++..+ ..++++||.|++++|+|+++...++..|.            +++.
T Consensus       104 ~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  180 (432)
T 3ei9_A          104 RAAIAKTFYG--GLGIGDDDVFVSDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEY  180 (432)
T ss_dssp             HHHHHHHHHT--TTTCCGGGEEEESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEE
T ss_pred             HHHHHHHHHc--cCCCCcceEEECCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEE
Confidence            9999999974  4567789999999999999985 67778999999999999999988887774            5777


Q ss_pred             eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631          160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV  239 (421)
Q Consensus       160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  239 (421)
                      ++++.++++..++++     .++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++.. .++..
T Consensus       181 ~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~~~~  254 (432)
T 3ei9_A          181 MRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RSIFE  254 (432)
T ss_dssp             EECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SSGGG
T ss_pred             eccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CChhh
Confidence            887655455455443     357889999999999999999999999999999999999999999998876543 23334


Q ss_pred             cC-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          240 FG-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       240 ~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      +. ..+++++++||||.|+++|+|+||+++++.........+.+.+.... ..+.+++++++.++.+++......++++.
T Consensus       255 ~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  334 (432)
T 3ei9_A          255 IPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKV  334 (432)
T ss_dssp             STTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHH
T ss_pred             cCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHH
Confidence            33 24578999999999999999999999975320000001234444433 23456888999998888864334678889


Q ss_pred             HHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEE
Q 014631          318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRIT  395 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~  395 (421)
                      +++++++++++.+.|+++ |+. +..+.+++|+|+.++.      .++.+++..+++++||.+.||..|+.  .+++|+|
T Consensus       335 ~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis  406 (432)
T 3ei9_A          335 IGFYKENTNIIIDTFTSL-GYD-VYGGKNAPYVWVHFPN------QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS  406 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TCC-EEECSSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHC-Cce-ecCCCcceEEEEECCC------CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE
Confidence            999999999999999988 887 4366788999999872      14678888888888999999998875  6899999


Q ss_pred             ecCCHHHHHHHHHHHHHHHHH
Q 014631          396 FAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       396 ~~~~~e~l~~~~~~l~~~~~~  416 (421)
                      +..+++++++++++|++--..
T Consensus       407 ~~~~~e~l~~~l~rl~~~~~~  427 (432)
T 3ei9_A          407 AFGHRENILEACRRFKQLYKH  427 (432)
T ss_dssp             CCSCHHHHHHHHHHHHHHHTT
T ss_pred             ecCCHHHHHHHHHHHHHHhhh
Confidence            999999999999999876443

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=2.7e-46  Score=361.63  Aligned_cols=373  Identities=18%  Similarity=0.213  Sum_probs=308.5

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL   99 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l   99 (421)
                      +..+.++++.++....... ...+.++|+|+.|.+.    +++++.+.+++.+.+.......|++..|+.++|+++++++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~-~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~   95 (437)
T 3g0t_A           21 KDLGMASIRDLVALVTNLE-KATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFA   95 (437)
T ss_dssp             SCGGGCCHHHHHHHHHHHH-HHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHH
T ss_pred             hcCCCcHHHHHHHHHHHHH-HhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHH
Confidence            3445677888777665432 2237899999999965    5788999999999988644368998889999999999999


Q ss_pred             hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--CCCC--eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631          100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLA--RPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus       100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +..+|..+++++|++|+|++++++.++.++.  ++||  +|++++|+|.++...++..|++++.++++ ++++.+|++++
T Consensus        96 ~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l  174 (437)
T 3g0t_A           96 KLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKL  174 (437)
T ss_dssp             HHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHH
T ss_pred             HHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHH
Confidence            9888888899999999999999999999998  9999  99999999999999999999999999986 45677899999


Q ss_pred             Hhhh-ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc----cc-cccCC-CCCEEE
Q 014631          176 EALA-DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV----RM-GVFGS-TVPVIT  248 (421)
Q Consensus       176 ~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~----~~-~~~~~-~~~~i~  248 (421)
                      ++.+ +++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++....    ++ ..+.. .+++++
T Consensus       175 ~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  254 (437)
T 3g0t_A          175 ESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYIL  254 (437)
T ss_dssp             HHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEE
T ss_pred             HHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEE
Confidence            9998 67889999999999999999999999999999999999999999999887643211    11 33332 567899


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHH-H-----------------Hhhhcc-cccCCchHHHHHHHHHhhcc
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD-S-----------------IKGYLN-ISSGPATFVQGAVPQIFKNT  309 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~-~~~~~~~~~~~~~~~~l~~~  309 (421)
                      +.|+||.++++|+|+||++++        +++++ .                 +..... ...+++.+.+.++..+|+. 
T Consensus       255 ~~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-  325 (437)
T 3g0t_A          255 ALSSSKAFSYAGQRIGVLMIS--------GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKA-  325 (437)
T ss_dssp             EEESTTTTSCGGGCCEEEEEC--------HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHH-
T ss_pred             EEcCccCCCCccceeEEEEEC--------HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhC-
Confidence            999999998899999999986        34555 5                 544432 3457888999999998875 


Q ss_pred             chhH---HHHHHHHHHHHHHHHHHHhhcCCCccccC------CC-CceeEEEEecCcccccCCCChHHHHHHHHhhcCee
Q 014631          310 KEDF---FSKIVDILRDTADICYDRIKEIPCITCPR------KP-EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI  379 (421)
Q Consensus       310 ~~~~---~~~~~~~~~~~~~~~~~~l~~~~g~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~  379 (421)
                      ...+   +++.+++++++++.+.+.|+++ |+. +.      .| .+++|+|+.++.      .+..++...|+ ++||.
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~gi~  396 (437)
T 3g0t_A          326 CNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFN-IVYDKDGNEPLADGFYFTVGYKG------MDSSKLIEKFV-RYGMC  396 (437)
T ss_dssp             HHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEE-ESSCEETTEECCSSSEEEEEETT------CCHHHHHHHHH-HTTEE
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCE-EeccccCCCCCceeEEEEEecCC------CCHHHHHHHHH-HcCeE
Confidence            2223   8889999999999999999998 887 43      24 789999999872      14667777664 56999


Q ss_pred             EEeCCCCCCC--CeEEEEec-CCHHHHHHHHHHHHHHHHH
Q 014631          380 VLPGMAVGMK--NWLRITFA-IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       380 v~~g~~~~~~--~~iRi~~~-~~~e~l~~~~~~l~~~~~~  416 (421)
                      +.||..|+..  +++|+|++ .+++++++++++|++++++
T Consensus       397 v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~  436 (437)
T 3g0t_A          397 AITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE  436 (437)
T ss_dssp             CEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred             EeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence            9999988653  78999999 5899999999999998754

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=1.6e-46  Score=361.22  Aligned_cols=368  Identities=17%  Similarity=0.168  Sum_probs=294.5

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCC---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHG---DPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARR   93 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~   93 (421)
                      ++++.+++++++++...+++..    .+++|||+.|   +|.  ...++++.+++++.+.+.......|++..|.+++|+
T Consensus        26 ~~~~~~~~~~i~~~~~~~~~~~----~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~   99 (420)
T 4f4e_A           26 SAVELAPRDPILGLNEAFNADT----RPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDA   99 (420)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHCC----CSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHH
T ss_pred             hcCCcCCCChHHHHHHHHHhcC----CCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHH
Confidence            3466778899999998887643    5689999999   444  224556999999999998755568999999999999


Q ss_pred             HHHHHHhhhCCCCCCCC--cEEEcCCHHHHHHHHHH--HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631           94 AIADYLNSELPCKLSPD--DVYLTAGCKQAIQVILT--VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE  169 (421)
Q Consensus        94 ~ia~~l~~~~~~~~~~~--~i~~~~g~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  169 (421)
                      ++++++....+..++++  +|++|+|++++++.+++  .++++||+|++++|+|.++...++..|.+++.++...+++++
T Consensus       100 ~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~  179 (420)
T 4f4e_A          100 SVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNG  179 (420)
T ss_dssp             HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTE
T ss_pred             HHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCc
Confidence            99999976544333677  89999999999999954  557899999999999999999999999999999984445678


Q ss_pred             CCHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Cccccccc-CCCC
Q 014631          170 VDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMGVF-GSTV  244 (421)
Q Consensus       170 ~d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~  244 (421)
                      +|++++++.++   ++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++. ...++..+ +..+
T Consensus       180 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~  259 (420)
T 4f4e_A          180 VNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANL  259 (420)
T ss_dssp             ECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred             cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCC
Confidence            99999999887   5678889999999999999999999999999999999999999999988753 22233332 2356


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH----HHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV----DSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFF  314 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~  314 (421)
                      ++++++||||.|+++|+|+||+++..+.     ++++    ..++... ..+.+++.+.+.++..++....     +.++
T Consensus       260 ~~i~~~S~SK~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  334 (420)
T 4f4e_A          260 NVFVSSSFSKSFSLYGERVGALSIITDS-----KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQEL  334 (420)
T ss_dssp             CEEEEEECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             CEEEEEeCCccCcCcCCCcEEEEEEcCC-----HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            7899999999999999999999753221     2333    3333322 2345677888888888887532     4567


Q ss_pred             HHHHHHHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631          315 SKIVDILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW  391 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  391 (421)
                      ++.+++++++++.+.+.|+++   +++. +..|.+|+|+|+.++         . +.+..+++++||.+.|+.       
T Consensus       335 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gI~v~~~~-------  396 (420)
T 4f4e_A          335 GEMRDRIRAMRNGLVERLKAAGIERDFS-FINAQRGMFSYSGLT---------S-AQVDRLREEFGIYAVSTG-------  396 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHSCSSEEECCCC---------H-HHHHHHHHHHCEECCTTS-------
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCce-eECCCccEEEEeCCC---------H-HHHHHHHHhCCEEecCCC-------
Confidence            888999999999999999986   3677 446888999997663         2 345667788899999852       


Q ss_pred             EEEEec-CCHHHHHHHHHHHHHHH
Q 014631          392 LRITFA-IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       392 iRi~~~-~~~e~l~~~~~~l~~~~  414 (421)
                       |+|++ .+++++++++++|++++
T Consensus       397 -Ris~~~~~~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          397 -RICVAALNTRNLDVVANAIAAVL  419 (420)
T ss_dssp             -EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             -eEEEecCCHHHHHHHHHHHHHHh
Confidence             99998 48888999999999876

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=2.3e-45  Score=348.74  Aligned_cols=359  Identities=28%  Similarity=0.454  Sum_probs=289.3

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      +..++++.++.+....+       .+.+|||+.|.+.    ++.++.+.+++.+++..  ...|++..+..++|++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~   73 (381)
T 1v2d_A            7 TEAAKESIFPRMSGLAQ-------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEE   73 (381)
T ss_dssp             GGGC---CHHHHHHHHH-------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHH
T ss_pred             hhhcCccHHHHHHHHHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHh
Confidence            44455555666555443       2468999999865    46789999999998876  35788878899999999999


Q ss_pred             HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc--CCCCccCCHHHHH
Q 014631           99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL--PEKGWEVDLDGLE  176 (421)
Q Consensus        99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~e~l~  176 (421)
                      +      ++++++|++|+|+++++..+++++.++||+|++++|+|+++...++..|.+++.++.+  ++ ++.+|+++++
T Consensus        74 ~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~  146 (381)
T 1v2d_A           74 F------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALE  146 (381)
T ss_dssp             H------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHHHH
T ss_pred             c------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHHHH
Confidence            7      4677899999999999999999999999999999999999999999999999999875  22 3679999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      +.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+ |....++..+ ..+.++++.|+||.|
T Consensus       147 ~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~sK~~  224 (381)
T 1v2d_A          147 KALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAGKRL  224 (381)
T ss_dssp             TTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHHHHT
T ss_pred             HhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeechhhc
Confidence            99988889999999999999999999999999999999999999999999877 4433334333 345679999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      +++|+|+||+++++        ++++.+..... ...+++++.+.++..+|+... ..++++.+++++++++++.+.|++
T Consensus       225 ~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  296 (381)
T 1v2d_A          225 EATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA  296 (381)
T ss_dssp             TCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88999999999853        24455544332 234678888888888887432 467888899999999999999998


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                      . |+. +..|.+++|+|+.++..         + +..+++++||.+.||..|+.    .+++|++++.+++++++++++|
T Consensus       297 ~-g~~-~~~~~~~~~~~~~~~~~---------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l  364 (381)
T 1v2d_A          297 M-GLR-VYVPEGTYFLMAELPGW---------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERL  364 (381)
T ss_dssp             T-TCC-EECCSBSSEEEEECTTC---------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHH
T ss_pred             C-CCE-ecCCCcceEEEEecChH---------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence            5 887 44677788999988631         2 55667889999999988864    5799999999999999999999


Q ss_pred             HHHHHHhhh
Q 014631          411 KAFCQRHAK  419 (421)
Q Consensus       411 ~~~~~~~~~  419 (421)
                      .+++++.++
T Consensus       365 ~~~l~~~r~  373 (381)
T 1v2d_A          365 GRVVNSPRE  373 (381)
T ss_dssp             HHHC-----
T ss_pred             HHHHhhccc
Confidence            999877654

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=1.9e-45  Score=351.19  Aligned_cols=366  Identities=22%  Similarity=0.334  Sum_probs=296.4

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHH
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~   97 (421)
                      ..++++.++.+....+       ++++|||+.|.|..  ...+++.+.+++.+.+...  ....|++..|..++|+++++
T Consensus        15 ~~~~~~~~~~~~~~~~-------~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~   85 (397)
T 2zyj_A           15 GRIQASTIRELLKLTQ-------RPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAE   85 (397)
T ss_dssp             GGCCCCHHHHHHHHHT-------STTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHH
T ss_pred             cccCchHHHHHHhhcc-------CCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHH
Confidence            3344555666655432       56899999998762  2346788999998888652  23578887889999999999


Q ss_pred             HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      ++      ++++++|++|+|+++++..+++++.++||+|++++|+|+++...++..|.+++.++.+++   ++|++++++
T Consensus        86 ~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~~d~~~l~~  156 (397)
T 2zyj_A           86 WI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---GPDLDALEE  156 (397)
T ss_dssp             HH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHHHH
T ss_pred             Hh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---CCCHHHHHH
Confidence            99      356789999999999999999999999999999999999999999999999999987542   389999999


Q ss_pred             hhcc-CceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC---CCEEEEccc
Q 014631          178 LADE-NTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST---VPVITLGSM  252 (421)
Q Consensus       178 ~~~~-~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~  252 (421)
                      .+++ +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.++|....++..++.+   +++++++|+
T Consensus       157 ~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~  236 (397)
T 2zyj_A          157 VLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSF  236 (397)
T ss_dssp             HHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEES
T ss_pred             HHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecc
Confidence            8875 67877 578999999999999999999999999999999999999998877654555555444   678999999


Q ss_pred             ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631          253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      ||+|+ +|+|+||++++        +++.+.+..... ...+++++.+.++.++|+.....++++.+++++++++.+.+.
T Consensus       237 sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  307 (397)
T 2zyj_A          237 SKVLS-PGLRVAFAVAH--------PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA  307 (397)
T ss_dssp             TTTTC-GGGCCEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccc-ccceeEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99998 99999999985        356676665443 234568899999988887531256788888999999999999


Q ss_pred             hhc-CC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----CCCeEEEEec-CCHHHHH
Q 014631          332 IKE-IP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----MKNWLRITFA-IEPSALE  404 (421)
Q Consensus       332 l~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~iRi~~~-~~~e~l~  404 (421)
                      |++ +| ++. +..|.+|+|+|++++..     .+..++...++ ++||.+.||..|+    .++++|++++ .++++++
T Consensus       308 L~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~  380 (397)
T 2zyj_A          308 LDREVPKEVR-YTRPKGGMFVWMELPKG-----LSAEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIA  380 (397)
T ss_dssp             HHHHSCTTSE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHH
T ss_pred             HHHHCCCCeE-EccCCccEEEEEEcCCC-----CCHHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHH
Confidence            987 57 587 44678899999998642     14667777765 4599999998875    3579999998 4799999


Q ss_pred             HHHHHHHHHHHHhhh
Q 014631          405 EGLGRIKAFCQRHAK  419 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~  419 (421)
                      +++++|.++++++.+
T Consensus       381 ~~~~~l~~~l~~~~~  395 (397)
T 2zyj_A          381 EGVRRLGRALKGLLA  395 (397)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988754

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=1.8e-45  Score=353.77  Aligned_cols=376  Identities=15%  Similarity=0.138  Sum_probs=295.1

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      .+..++.+..+...+++...+.++.++|+|+.|.|. ..+.+++++.+.+++.+..... ...|++..|.+++|++++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~   92 (418)
T 3rq1_A           14 GKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAPIAGIPDFLCAAEKE   92 (418)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCCTTCCHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCCCCChHHHHHHHHHH
Confidence            344567788888777776655557799999999872 2234678899988887654322 24798889999999999999


Q ss_pred             HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631           99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus        99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +....+.. .+++|++|+|+++++..++++++++||+|++++|+|.++...++..|.+++.+++.+++ +++|++++++.
T Consensus        93 ~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l~~~  170 (418)
T 3rq1_A           93 CFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAFQNR  170 (418)
T ss_dssp             HHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHHHHH
T ss_pred             HhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHHHHH
Confidence            97655421 13399999999999999999999999999999999999999999999999999986444 67999999998


Q ss_pred             hcc----Cce-EEEEeCC-CCCcccccCHHHHHHHHHHHH------hcCcEEEEcccccccccCCCCccccc-ccC-CCC
Q 014631          179 ADE----NTV-AMVIVNP-GNPCGNVFTYQQLQKIAEKAR------KLGIMVISDEVYDHLTFGSTPYVRMG-VFG-STV  244 (421)
Q Consensus       179 ~~~----~~~-~i~~~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~~~-~~~-~~~  244 (421)
                      +++    +++ ++++++| +||||.+++.+++++|+++|+      +||+++|+||+|.++.+.+....++. ... ..+
T Consensus       171 l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~  250 (418)
T 3rq1_A          171 VNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPK  250 (418)
T ss_dssp             HHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCT
T ss_pred             HHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCC
Confidence            864    555 6788899 999999999999999999999      89999999999999886654322222 222 123


Q ss_pred             C--EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-----cccCCchHHHHHHHHHhhccc-----hh
Q 014631          245 P--VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-----ISSGPATFVQGAVPQIFKNTK-----ED  312 (421)
Q Consensus       245 ~--~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~-----~~  312 (421)
                      +  +++++||||.|+++|+|+||+++..+.     +++++.+.....     .+++++.+++.++..+++...     ..
T Consensus       251 ~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  325 (418)
T 3rq1_A          251 EILTCVCYSLSKGFTMYGQRVGAMIGISDD-----EEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEA  325 (418)
T ss_dssp             TEEEEEEEESTTTTTCCSSCCEEEEEEESS-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             CceEEEEEeCCCCCcCcCCcceEEEEEeCC-----HHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHH
Confidence            4  588899999999999999999982100     356666655432     124678889999888887531     12


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeE
Q 014631          313 FFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL  392 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~i  392 (421)
                      ...+.+++++++++.+.+.|+++ |+. +..|.+++|+|+.++        +..++.. ++.++||.+.||.     +++
T Consensus       326 ~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~-~l~~~gi~v~~g~-----~~i  389 (418)
T 3rq1_A          326 ERNCYYQLIRDRADIFKQEAAQV-GLP-MLPYRGGFFITIPTD--------SANAICE-ELKKEHIYVIALA-----NGI  389 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCCCSSSEEEEECT--------THHHHHH-HHHHTTEECEECS-----SEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCCCceEEEEcCCC--------CHHHHHH-HHHhCCEEEecCC-----CCe
Confidence            33456678899999999999987 888 457888999998774        3566765 4578899999983     689


Q ss_pred             EEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631          393 RITFA-IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       393 Ri~~~-~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      |+|++ .+++++++++++|+++++++.+
T Consensus       390 Ris~~~~~~~~i~~~~~~l~~~l~~~~~  417 (418)
T 3rq1_A          390 RIAACGIPKCQMTGLAEKIYNAMKSLGK  417 (418)
T ss_dssp             EEEGGGSCHHHHTTHHHHHHHHHHHTTC
T ss_pred             EEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence            99998 6999999999999999988753

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=8.2e-46  Score=353.78  Aligned_cols=366  Identities=16%  Similarity=0.149  Sum_probs=290.9

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCC---CCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHG---DPSAFPCFRTTPVAADAVVD-AVRSAEFDCYSPSVGILPARR   93 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~l~~   93 (421)
                      +++..+++.++.+...++++.    .+++|||+.|   +|.  ...+.++.+.+++.+ .+.......|++..|..++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~   77 (397)
T 3fsl_A            4 KVDAYAGDPILTLMERFKEDP----RSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRH   77 (397)
T ss_dssp             TCCCCCCCHHHHHHHHHHTCC----CSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHH
T ss_pred             cCCCCCCCchhhHHHHHhcCC----CCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHH
Confidence            355566788889888887644    5789999999   443  224556999999999 887655568998899999999


Q ss_pred             HHHHHHhhhCCCCCCCC--cEEEcCCHHHHHHHHHH--HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631           94 AIADYLNSELPCKLSPD--DVYLTAGCKQAIQVILT--VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE  169 (421)
Q Consensus        94 ~ia~~l~~~~~~~~~~~--~i~~~~g~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  169 (421)
                      ++++++....+..++++  +|++|+|++++++.+++  .++++||+|++++|+|.++...++..|.+++.+++.++++++
T Consensus        78 ~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  157 (397)
T 3fsl_A           78 AIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNG  157 (397)
T ss_dssp             HHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTE
T ss_pred             HHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCc
Confidence            99999976544334678  89999999999999954  456899999999999999999999999999999885455678


Q ss_pred             CCHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Cccccccc-CCCC
Q 014631          170 VDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMGVF-GSTV  244 (421)
Q Consensus       170 ~d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~  244 (421)
                      +|++++++.++   ++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++. ...++..+ +..+
T Consensus       158 ~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  237 (397)
T 3fsl_A          158 VRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL  237 (397)
T ss_dssp             ECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred             CcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCC
Confidence            99999999887   5678888999999999999999999999999999999999999999987632 22233333 3456


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH----Hhhhc-ccccCCchHHHHHHHHHhhccc-----hhHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS----IKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFF  314 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~  314 (421)
                      ++++++||||.|+++|+|+||++++...     +++++.    ++... ..+.+++.+++.++..++....     ..++
T Consensus       238 ~~i~~~S~SK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  312 (397)
T 3fsl_A          238 PALVSNSFSKIFSLYGERVGGLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEV  312 (397)
T ss_dssp             CEEEEEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred             CEEEEecccccccCcCCCeeEEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            7899999999999999999999864222     233332    22221 2345667888888888886421     4667


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631          315 SKIVDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW  391 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  391 (421)
                      ++.+++++++++.+.+.|++++   ++. +..|.+++|+|+.++         . +.+..+++++||.+.||.       
T Consensus       313 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~g~-------  374 (397)
T 3fsl_A          313 EEMRTRILAMRQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS---------A-AQVDRLREEFGVYLIASG-------  374 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCTTSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHTTCEECCTTC-------
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCce-eecCCceEEEecCCC---------H-HHHHHHHHhCCEEECCCC-------
Confidence            8888999999999999999864   676 446788999997663         2 345667788999999874       


Q ss_pred             EEEEec-CCHHHHHHHHHHHHHH
Q 014631          392 LRITFA-IEPSALEEGLGRIKAF  413 (421)
Q Consensus       392 iRi~~~-~~~e~l~~~~~~l~~~  413 (421)
                       |++++ .+++++++++++|+++
T Consensus       375 -Ris~~~~~~~~i~~~~~~l~~~  396 (397)
T 3fsl_A          375 -RMCVAGLNTANVQRVAKAFAAV  396 (397)
T ss_dssp             -EEEGGGCCTTTHHHHHHHHHHH
T ss_pred             -eEEEEecCHhhHHHHHHHHHhh
Confidence             99998 4888899999999876

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=1.3e-45  Score=355.99  Aligned_cols=352  Identities=16%  Similarity=0.232  Sum_probs=285.5

Q ss_pred             CCCeeeccCCCC-CCCCCCCCcHHH--HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc---EEEcC
Q 014631           43 PRPIIPLGHGDP-SAFPCFRTTPVA--ADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD---VYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~-~~~~~~~~~~~v--~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~---i~~~~  116 (421)
                      .+++|||+.|.| .    ++.++.+  .+++.+.+.......|++..|..++|+++++++.+.+ .++++++   |++|+
T Consensus        46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~  120 (430)
T 2x5f_A           46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN  120 (430)
T ss_dssp             TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred             CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence            357899999997 4    2334444  6666555543234689888899999999999998765 6677888   99999


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh-cCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARH-TRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPG  192 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~  192 (421)
                      |++++++.++++++++||+|++++|+|+++...++. .|.+++.++.++++ +++|++++++.+++   +++++++++|+
T Consensus       121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~  199 (430)
T 2x5f_A          121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPN  199 (430)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred             CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence            999999999999999999999999999999999999 99999999886543 67999999998876   78889999999


Q ss_pred             CCcccccCHHHHHHHHHHHHh-----cCcEEEEcccccccccCCCCccccc-ccCC-CCC---EEEEcccccccCCCCce
Q 014631          193 NPCGNVFTYQQLQKIAEKARK-----LGIMVISDEVYDHLTFGSTPYVRMG-VFGS-TVP---VITLGSMSKRWIVPGWR  262 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~~-~~~~-~~~---~i~~~s~sK~~~~~G~r  262 (421)
                      ||||.+++.+++++|+++|++     ||+++|+||+|+++.+++....++. .++. .++   +++++|+||.|+++|+|
T Consensus       200 nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  279 (430)
T 2x5f_A          200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFR  279 (430)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGC
T ss_pred             CCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCC
Confidence            999999999999999999999     9999999999999988765444443 3432 456   89999999999889999


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhhcc-----cccCCchHHHHHHHHHhh-ccc-hhHHHHHHHHHHHHHHHHHHHhh--
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGYLN-----ISSGPATFVQGAVPQIFK-NTK-EDFFSKIVDILRDTADICYDRIK--  333 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~~~~~~~l~--  333 (421)
                      +||+++..+.     +++.+.+.....     .+.+++++.+.++.++|+ ... ...+++.+++++++++.+.+.|+  
T Consensus       280 iG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  354 (430)
T 2x5f_A          280 VGFMTFGTSD-----QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYAD  354 (430)
T ss_dssp             CEEEEEBCCC-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCG
T ss_pred             eEEEEEecCC-----HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999981100     356666655432     345788999999999997 531 22334488899999999999998  


Q ss_pred             --cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHH
Q 014631          334 --EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRI  410 (421)
Q Consensus       334 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l  410 (421)
                        +. ++. +..|.+++|+|+.++ .     .+..++...+++++||.+.||    ..+++|++++ .+++++++++++|
T Consensus       355 ~~~~-g~~-~~~~~~g~~~~~~~~-~-----~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l  422 (430)
T 2x5f_A          355 QYHS-HWQ-AYDFNSGYFMAIKVH-D-----VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSI  422 (430)
T ss_dssp             GGTT-TEE-ECCCCBSSEEEEEES-S-----SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHH
T ss_pred             CCCC-Cce-eeCCCceEEEEeCCC-C-----CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHH
Confidence              55 777 447788899999987 2     146778877766589999998    3578999999 8899999999999


Q ss_pred             HHHHHHh
Q 014631          411 KAFCQRH  417 (421)
Q Consensus       411 ~~~~~~~  417 (421)
                      +++++++
T Consensus       423 ~~~l~~~  429 (430)
T 2x5f_A          423 AKAIDDL  429 (430)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            9998765

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=2.4e-45  Score=351.04  Aligned_cols=373  Identities=16%  Similarity=0.133  Sum_probs=289.6

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      +++..++++++.....++...    .+.+|+|+.|.| +.....+..+.+.+++.+.........|.+..|.+++|++++
T Consensus         6 ~~~~~~~~~i~~~~~~~~~~~----~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   81 (401)
T 7aat_A            6 HVEMGPPDPILGVTEAFKRDT----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASA   81 (401)
T ss_dssp             TCCCCCCCHHHHHHHHHHHCC----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHH
T ss_pred             cCCCCCCChhHHHHHHHhhCC----CCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHH
Confidence            455666788888888777543    567899999997 433334456788998888776434568988899999999999


Q ss_pred             HHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhc---CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631           97 DYLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLA---RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD  171 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d  171 (421)
                      ++++..+|..+++++|++  |+|++++++.++..+.   ++||+|++++|+|.++...++..|.+++.++++.++++++|
T Consensus        82 ~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  161 (401)
T 7aat_A           82 ELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLD  161 (401)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEEC
T ss_pred             HHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccC
Confidence            999887776677999987  9999999999887664   89999999999999999999999999999998655567899


Q ss_pred             HHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--Cccccccc-CCCCC
Q 014631          172 LDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVF-GSTVP  245 (421)
Q Consensus       172 ~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~~~  245 (421)
                      ++.+++.+.   ++++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.  ...++..+ +..++
T Consensus       162 ~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~  241 (401)
T 7aat_A          162 FTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGID  241 (401)
T ss_dssp             HHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCc
Confidence            997766553   5678889999999999999999999999999999999999999999887643  12222222 34567


Q ss_pred             EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-----hhHHHHHHH
Q 014631          246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-----EDFFSKIVD  319 (421)
Q Consensus       246 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~  319 (421)
                      +++++||||.|+++|+|+||++++...... ...+...+..... .+.+++...+.++..+++...     ..++++.++
T Consensus       242 ~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  320 (401)
T 7aat_A          242 VVLSQSYAKNMGLYGERAGAFTVICRDAEE-AKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD  320 (401)
T ss_dssp             CEEEEECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCcccccccCceEEEEEEeCCHHH-HHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            899999999999999999999874322100 0114444444332 234666777777777776421     345777888


Q ss_pred             HHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe
Q 014631          320 ILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF  396 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~  396 (421)
                      +++++++++.+.|+++   +++. +..|.+++|.|+.++          .+++..+++++||.+.|+        +|+|+
T Consensus       321 ~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~Ris~  381 (401)
T 7aat_A          321 RIISMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GRISV  381 (401)
T ss_dssp             HHHHHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEEEG
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------CeEEe
Confidence            9999999999999876   2365 346888999997553          345577778899999865        59999


Q ss_pred             c-CCHHHHHHHHHHHHHHH
Q 014631          397 A-IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       397 ~-~~~e~l~~~~~~l~~~~  414 (421)
                      + .+++++++++++|++++
T Consensus       382 ~~~~~~~i~~~~~~l~~~~  400 (401)
T 7aat_A          382 AGVASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             GGCCTTTHHHHHHHHHHHH
T ss_pred             ccCChhhHHHHHHHHHHHh
Confidence            8 66677999999999875

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=2.6e-44  Score=339.25  Aligned_cols=333  Identities=20%  Similarity=0.300  Sum_probs=281.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      +..++|+|+.|.+.    +++++.+.+++.+.+..  ...| +..+..++|+++++++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a   96 (363)
T 3ffh_A           30 GLTKITKLSSNENP----LGTSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFY------QLEEEELIFTAGVDEL   96 (363)
T ss_dssp             TCSCCEECSSCSCT----TCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred             CCCceEEccCCCCC----CCCCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence            35789999999855    57889999999886643  4466 4567899999999999      4678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ++.+++++.++||+|+++.|+|.++...++..|.+++.++.++  ++.+|++++++.++++++++++++|+||||.+++.
T Consensus        97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~  174 (363)
T 3ffh_A           97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL  174 (363)
T ss_dssp             HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence            9999999999999999999999999999999999999999864  46799999999998899999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++.+|++.|++ |+++|+|++|+++.+ +.....+...+..++++++.|+||.++++|+|+||++++        +++.
T Consensus       175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~  244 (363)
T 3ffh_A          175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD--------KEII  244 (363)
T ss_dssp             HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC--------HHHH
T ss_pred             HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC--------HHHH
Confidence            999999998888 999999999999887 544334444455678999999999999999999999995        4677


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+..... ..+++.+.+.++.++++.  ..++++.+++++++++++.+.|++++++. + .+..++|+|+.++.     
T Consensus       245 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~~-----  314 (363)
T 3ffh_A          245 RQLNIVRP-PFNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPANGNFVLIDLGI-----  314 (363)
T ss_dssp             HHHHHTCC-SCCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCCCSSEEEEECSS-----
T ss_pred             HHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCCCCeEEEEECCC-----
Confidence            77777655 357889999999999974  47788999999999999999999866888 4 34556788988863     


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                        +..++...+ .++||.+.+|..|+.++++|++++ +++++++++++|+++
T Consensus       315 --~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          315 --EAGTIFSYL-EKNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL  362 (363)
T ss_dssp             --CHHHHHHHH-HHTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHH-HHCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence              356677666 567999999999988899999998 889999999999876

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=1.2e-44  Score=349.72  Aligned_cols=362  Identities=21%  Similarity=0.348  Sum_probs=291.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----------CCCCCCCCCCHHHHHHHHHHHhhhCC--CCCCC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-----------FDCYSPSVGILPARRAIADYLNSELP--CKLSP  109 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~y~~~~g~~~l~~~ia~~l~~~~~--~~~~~  109 (421)
                      ...+|+|+.+.-     ...++.+.+++.+......           ...|++..|.+++|+++++++++.++  ..+++
T Consensus        37 p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~  111 (435)
T 3piu_A           37 TNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP  111 (435)
T ss_dssp             TTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG
T ss_pred             CCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH
Confidence            345788887652     2346777777776544221           13699999999999999999986544  45678


Q ss_pred             CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631          110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------N  182 (421)
Q Consensus       110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~  182 (421)
                      ++|++|+|+++++..++.+++++||.|+++.|+|.++...+. ..|.+++.+++++++++.+|++++++.+.+      +
T Consensus       112 ~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  191 (435)
T 3piu_A          112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR  191 (435)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred             HHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999988887 789999999987766788999999998865      7


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC----------CCCEEEEccc
Q 014631          183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS----------TVPVITLGSM  252 (421)
Q Consensus       183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~s~  252 (421)
                      +++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++..+.++..+..          .+++++++||
T Consensus       192 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~  271 (435)
T 3piu_A          192 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL  271 (435)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred             eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence            889999999999999999999999999999999999999999998888766555443322          4678999999


Q ss_pred             ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHH
Q 014631          253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYD  330 (421)
Q Consensus       253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~  330 (421)
                      ||.|+++|+|+||+++++       +++.+.+...... .+.+++.+.++.+++....  +.++++.+++++++++++.+
T Consensus       272 sK~~g~~G~r~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  343 (435)
T 3piu_A          272 SKDLGLPGFRVGAIYSND-------DMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVS  343 (435)
T ss_dssp             SSSSCCGGGCEEEEEESC-------HHHHHHHHHHGGG-SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecccCCCceeEEEEEeCC-------HHHHHHHHHHhhc-CCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999853       3456666554433 4677888888888887532  34667788899999999999


Q ss_pred             HhhcCCCccccCCCCceeEEEEecCcccccCC-CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecC-CHHHHHHH
Q 014631          331 RIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI-SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAI-EPSALEEG  406 (421)
Q Consensus       331 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~-~~e~l~~~  406 (421)
                      .|+++ |+. +..+.+|+|+|+.++....... .+..+++..+++++||.+.||..|+.  ++++|++++. ++++++++
T Consensus       344 ~L~~~-g~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~  421 (435)
T 3piu_A          344 GLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLA  421 (435)
T ss_dssp             HHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHH
T ss_pred             HHHhc-CCc-ccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHH
Confidence            99987 887 4477888999999875311000 01346777777777999999988754  6799999985 99999999


Q ss_pred             HHHHHHHHHHhhh
Q 014631          407 LGRIKAFCQRHAK  419 (421)
Q Consensus       407 ~~~l~~~~~~~~~  419 (421)
                      +++|.++++++++
T Consensus       422 l~~l~~~l~~~~~  434 (435)
T 3piu_A          422 MQRLKAFVGEYYN  434 (435)
T ss_dssp             HHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999987753

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=9.5e-45  Score=346.64  Aligned_cols=368  Identities=17%  Similarity=0.230  Sum_probs=277.4

Q ss_pred             HHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhh
Q 014631           27 VRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIADYLNSE  102 (421)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~l~~~ia~~l~~~  102 (421)
                      +..+..+.+....+..+.++|+|+.|.+.    ++.++.+.+++.+.++..    ....|++..|..++|+++++++.  
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--   89 (400)
T 3asa_A           16 FADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--   89 (400)
T ss_dssp             HHHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--
T ss_pred             HHHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--
Confidence            33444444433323347889999999865    467889999999887642    24578888899999999999974  


Q ss_pred             CCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCce-eEeeeccCCCCccCCHHHHHhhhcc
Q 014631          103 LPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE-IRHFDLLPEKGWEVDLDGLEALADE  181 (421)
Q Consensus       103 ~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~~~d~e~l~~~~~~  181 (421)
                      +|. +++++|++|+|+++++..++.. +++||+|++++|+|+++...+...|.+ ++.++.++++++..++++   .  +
T Consensus        90 ~g~-~~~~~v~~~~G~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~---~--~  162 (400)
T 3asa_A           90 RGF-VDAKEIFISDGAKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE---D--T  162 (400)
T ss_dssp             TTS-SCGGGEEEESCHHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT---T--C
T ss_pred             cCC-CCHHHEEEccChHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh---c--c
Confidence            343 6789999999999999997654 479999999999999999999999998 888987654444444432   1  5


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCC
Q 014631          182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPG  260 (421)
Q Consensus       182 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G  260 (421)
                      +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..++. .+++++++||||.|+++|
T Consensus       163 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G  242 (400)
T 3asa_A          163 HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAG  242 (400)
T ss_dssp             CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTT
T ss_pred             CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcc
Confidence            6889999999999999999999999999999999999999999988776643344545543 356899999999998999


Q ss_pred             ceEEEEEeeCCCcchhHHHHHHHHhh-h-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631          261 WRLGWLVTSDPSGILQELRIVDSIKG-Y-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI  338 (421)
Q Consensus       261 ~r~G~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  338 (421)
                      +|+||+++++......... ++.+.. . ...+.+++.+.|.++.++|+..   ++++.+++++++++.+.+.|+++ ++
T Consensus       243 lriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~-g~  317 (400)
T 3asa_A          243 IRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLAT-GF  317 (400)
T ss_dssp             CCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             hheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            9999999864220000000 122211 1 1123468889999988888752   56778889999999999999987 77


Q ss_pred             cccCCCCceeEEEEe-cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          339 TCPRKPEGSMFVMVK-LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       339 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      . +..|.+++|+|+. ++..     .+..+++..+++++||.+.||..|+.  ++++|+++..+++++++++++|+++++
T Consensus       318 ~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~  391 (400)
T 3asa_A          318 E-VFGGEHAPYLWVKPTQAN-----ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPA  391 (400)
T ss_dssp             E-EEECSSSSEEEEECCCTT-----CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC---
T ss_pred             e-eeCCCCceEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHH
Confidence            7 4466778999998 7532     13446777777778999999988863  578999977899999999999999987


Q ss_pred             Hhh
Q 014631          416 RHA  418 (421)
Q Consensus       416 ~~~  418 (421)
                      ++.
T Consensus       392 ~~~  394 (400)
T 3asa_A          392 LQS  394 (400)
T ss_dssp             ---
T ss_pred             hhh
Confidence            654

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=4.2e-44  Score=345.27  Aligned_cols=359  Identities=18%  Similarity=0.347  Sum_probs=284.7

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc----------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCC--CCCCc
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS----------AEFDCYSPSVGILPARRAIADYLNSELPCK--LSPDD  111 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~--~~~~~  111 (421)
                      ..+|+|+.+...     ..++.+.+++.+....          .....|++..|..++|+++++++++.+|..  +++++
T Consensus        36 ~~~i~l~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~  110 (428)
T 1iay_A           36 NGVIQMGLAENQ-----LCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER  110 (428)
T ss_dssp             TSBEECSSCCCC-----SSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred             Cceeeeccccch-----hhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence            478999877522     2345777777753210          013478888889999999999999888755  77899


Q ss_pred             EEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH-hhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cce
Q 014631          112 VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA-RHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTV  184 (421)
Q Consensus       112 i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~  184 (421)
                      |++|+|+++++..++++++++||+|+++.|+|+++...+ ...|.+++.++.+.+++|.+|++++++.+++      +++
T Consensus       111 i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~  190 (428)
T 1iay_A          111 VVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVK  190 (428)
T ss_dssp             CEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred             EEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceE
Confidence            999999999999999999999999999999999987644 4689999999886556678999999988753      678


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--------CCCEEEEccccccc
Q 014631          185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--------TVPVITLGSMSKRW  256 (421)
Q Consensus       185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~sK~~  256 (421)
                      ++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+..        .++++++.|+||.|
T Consensus       191 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~  270 (428)
T 1iay_A          191 GLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM  270 (428)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS
T ss_pred             EEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc
Confidence            8999999999999999999999999999999999999999998876654444433322        36789999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      +++|+|+||+++++       +++++.+...... .+.+.++|.++..+++...  +.++++.+++++++++++.+.|++
T Consensus       271 g~~Glr~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  342 (428)
T 1iay_A          271 GLPGFRVGIIYSFN-------DDVVNCARKMSSF-GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV  342 (428)
T ss_dssp             SCGGGCEEEEEESC-------HHHHHHHHHHHTT-SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEEeCC-------HHHHHHHHHHHhc-ccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999853       3466666654432 4678899999988887522  246788889999999999999998


Q ss_pred             CCCccccCCCCceeEEEEecCcccccC-CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEG-ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLGRI  410 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~~l  410 (421)
                      + ++. +..+.+|+|+|++++...... .....++...+++++||.+.+|..|+.  ++++|++++ .+++++++++++|
T Consensus       343 ~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l  420 (428)
T 1iay_A          343 V-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARI  420 (428)
T ss_dssp             T-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHH
T ss_pred             c-CCc-ccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence            8 887 446668899999986421000 001345666666666999999988764  578999999 8999999999999


Q ss_pred             HHHHHHh
Q 014631          411 KAFCQRH  417 (421)
Q Consensus       411 ~~~~~~~  417 (421)
                      ++++++.
T Consensus       421 ~~~l~~~  427 (428)
T 1iay_A          421 RRFVGVE  427 (428)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhcc
Confidence            9998653

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=4.5e-44  Score=336.40  Aligned_cols=336  Identities=18%  Similarity=0.281  Sum_probs=285.3

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..+..+|+|+.|.+.    +++++.+.+++.+.+..  ...|+ ..+..++|+++++++      ++++++|++|+|+++
T Consensus        13 ~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~------~~~~~~i~~~~g~~~   79 (354)
T 3ly1_A           13 PSTDNPIRINFNENP----LGMSPKAQAAARDAVVK--ANRYA-KNEILMLGNKLAAHH------QVEAPSILLTAGSSE   79 (354)
T ss_dssp             CCSSSCEECSSCCCS----SCCCHHHHHHHHHTGGG--TTSCC-HHHHHHHHHHHHHHT------TSCGGGEEEESHHHH
T ss_pred             CCCCceEEccCCCCC----CCCCHHHHHHHHHHHhh--CcCCC-CCchHHHHHHHHHHh------CCChHHEEEeCChHH
Confidence            457899999999855    57889999999998875  45674 457789999999998      467889999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeCCCCCcccc
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVNPGNPCGNV  198 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~p~nptG~~  198 (421)
                      +++.+++++.++||+|+++.|+|+++...++..|.+++.++.++  ++.+|++++++.++  ++++++++++|+||||.+
T Consensus        80 a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~  157 (354)
T 3ly1_A           80 GIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTI  157 (354)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCC
T ss_pred             HHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCC
Confidence            99999999999999999999999999999999999999998753  46799999999997  789999999999999999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC-CCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST-VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                      ++.+++++|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.|+++|+|+||++++        
T Consensus       158 ~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------  228 (354)
T 3ly1_A          158 TPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH--------  228 (354)
T ss_dssp             CCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC--------
T ss_pred             cCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC--------
Confidence            9999999999999 8999999999999988776543343333444 67899999999998899999999985        


Q ss_pred             HHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631          278 LRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS  357 (421)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  357 (421)
                      +++.+.+...... .+++++.+.++.++++.  ..++++.+++++++++.+.+.|+++ ++. + .+..+.|+|+.++. 
T Consensus       229 ~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~~~~~~~~~~~~-  301 (354)
T 3ly1_A          229 PTVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPSEGNFVFHQLVV-  301 (354)
T ss_dssp             HHHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECSS-
T ss_pred             HHHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCCceEEEEECCC-
Confidence            4677888777654 58889999999999874  3778889999999999999999987 777 4 35567788988863 


Q ss_pred             cccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          358 LLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       358 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                            +..++...| .++||.+. |..++.++++|++++ +++++++++++|++++++
T Consensus       302 ------~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          302 ------PLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             ------CHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred             ------CHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence                  356666665 56799998 877777889999988 688999999999998865

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=7e-45  Score=349.04  Aligned_cols=373  Identities=15%  Similarity=0.172  Sum_probs=293.4

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAVRS-AEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ++.++++.++.+...+++.    .+.++|||+.|.| ......++++.+.+++.+.+.. ...+.|++..|..++|++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la   84 (412)
T 1ajs_A            9 VPQAQPVLVFKLIADFRED----PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCAS   84 (412)
T ss_dssp             CCCCCCCHHHHHHHHHHTC----CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHH
T ss_pred             CcccCCchHHHHHHHHhhc----CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHH
Confidence            4456678899988877743    3678999999986 3222345678999999988733 23467988899999999999


Q ss_pred             HHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHH--HhcCCC-----CeEEEcCCCCcchHHHHhhcCce-eEeeeccCCC
Q 014631           97 DYLNSELPCKLSPDDVYL--TAGCKQAIQVILT--VLARPG-----ANILLPKPGFPLYEANARHTRLE-IRHFDLLPEK  166 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~--~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~  166 (421)
                      +++...+|..+++++|++  |+|++++++++++  .++++|     |+|+++.|+|+++...++..|.+ ++.++..+++
T Consensus        85 ~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  164 (412)
T 1ajs_A           85 RLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTE  164 (412)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETT
T ss_pred             HHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCC
Confidence            999655554457889999  9999999999965  345799     99999999999999999999999 9999875446


Q ss_pred             CccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC--CCcccccccC
Q 014631          167 GWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS--TPYVRMGVFG  241 (421)
Q Consensus       167 ~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~  241 (421)
                      ++.+|++++++.+.+   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++|  ....++..+.
T Consensus       165 ~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~  244 (412)
T 1ajs_A          165 KRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFV  244 (412)
T ss_dssp             TTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHH
T ss_pred             CCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHh
Confidence            678999999998764   56777789999999999999999999999999999999999999988765  1222333332


Q ss_pred             -CCCCEEEEcccccccCCCCceEEEEEee--CCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hh
Q 014631          242 -STVPVITLGSMSKRWIVPGWRLGWLVTS--DPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----ED  312 (421)
Q Consensus       242 -~~~~~i~~~s~sK~~~~~G~r~G~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~  312 (421)
                       ..++++++.|+||.|+++|+|+||+++.  +++ ..  ..+.+.+.... ..+.+++++.+.++.++|+...     +.
T Consensus       245 ~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  321 (412)
T 1ajs_A          245 SEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPD-SI--LRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTG  321 (412)
T ss_dssp             HTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHH
T ss_pred             ccCCcEEEEEecccccCCCCcceEEEEEecCCHH-HH--HHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHH
Confidence             3457899999999999899999999982  211 00  12444444422 3344568899999999997532     34


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC
Q 014631          313 FFSKIVDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK  389 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~  389 (421)
                      ++++.+++++++++++.+.|+++.   ++. +..|.+++|.|+.++          .+++..+++++||.+.|+      
T Consensus       322 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~------  384 (412)
T 1ajs_A          322 NVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPS------  384 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTT------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCCCee-EEcCCCceEEEeCCC----------HHHHHHHHHhCCEEecCC------
Confidence            778889999999999999999873   366 336788899987553          346667778899999874      


Q ss_pred             CeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631          390 NWLRITFA-IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       390 ~~iRi~~~-~~~e~l~~~~~~l~~~~~~~  417 (421)
                        +|++++ .+++++++++++|+++++++
T Consensus       385 --~Ris~~~~~~~~i~~~~~~l~~~l~~~  411 (412)
T 1ajs_A          385 --GRINMCGLTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             --SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             --cEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence              599999 58999999999999998764

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=2.3e-43  Score=333.31  Aligned_cols=332  Identities=18%  Similarity=0.294  Sum_probs=282.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKL-SPDDVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~~~g~~~a  121 (421)
                      +..+|+|+.|.+.    ++.++.+.+++.+.+.......|+. .+..++|++++++++      + ++++|++|+|++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g------~~~~~~i~~~~g~t~a   97 (367)
T 3euc_A           29 SHGLVKLDAMENP----YRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQ------VPAGMEVLLGNGSDEI   97 (367)
T ss_dssp             CTTCEECCSSCCC----CCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHT------CCTTCEEEEEEHHHHH
T ss_pred             CCCeeEccCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhC------CCCcceEEEcCCHHHH
Confidence            5789999999854    5788999999999987544457865 578999999999983      4 67899999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccC
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~  200 (421)
                      ++.++++++++||+|++++|+|.++...++..|.+++.++.++  ++.+|++++++.+++ +++++++++|+||||.+++
T Consensus        98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~  175 (367)
T 3euc_A           98 ISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD  175 (367)
T ss_dssp             HHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999998764  567999999999987 8999999999999999999


Q ss_pred             HHHHHHHHHHHHhc--CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          201 YQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       201 ~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      .+++++|+++|++|  |+++|+||+|+.+...+  ...  .++..++++++.|+||. +++|+|+||++++        +
T Consensus       176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~~~--~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~--------~  242 (367)
T 3euc_A          176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--WMS--RLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD--------P  242 (367)
T ss_dssp             HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--SGG--GGGTCTTEEEEEECCCT-TSCSCCEEEEEEC--------H
T ss_pred             HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--hHH--HHhhCCCEEEEecchhh-cccccCceeeeeC--------H
Confidence            99999999999999  99999999999876322  222  33445678999999999 9999999999985        4


Q ss_pred             HHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631          279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL  358 (421)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  358 (421)
                      ++.+.+...... .+++.+.+.++..+++.  ..++++.+++++++++++.+.|+++|++. + .|..++|+|+.++   
T Consensus       243 ~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~---  314 (367)
T 3euc_A          243 QWLEQLDKVRPP-YNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPSAANFLLARVP---  314 (367)
T ss_dssp             HHHHHHGGGCCS-SCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCCSSSEEEEECS---
T ss_pred             HHHHHHHHhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC---
Confidence            677777766543 46889999999999975  67788999999999999999999998988 5 4666788998886   


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                           +..++...+ .++||.+.+|..|+.  .+++|++++ +++++++++++|+++++
T Consensus       315 -----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~  366 (367)
T 3euc_A          315 -----DAAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ  366 (367)
T ss_dssp             -----CHHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred             -----CHHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence                 255666654 778999999987753  689999998 88999999999998763

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=9.5e-44  Score=335.65  Aligned_cols=333  Identities=15%  Similarity=0.220  Sum_probs=281.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..++|+|+.|.+.    +++++.+.+++.+.+..  ...|++..+ .++|+++++++      ++++++|++|+|+++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~   95 (365)
T 3get_A           29 VKEVIKLASNENP----FGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI   95 (365)
T ss_dssp             CSCCEECSSCCCT----TCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            4789999999855    57889999999998874  457877665 99999999998      46788999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      +.++.+++++||+|+++.|+|.++...++..|.+++.+++ .++++ +|++++++.++++++++++++|+||||.++|.+
T Consensus        96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~  173 (365)
T 3get_A           96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS  173 (365)
T ss_dssp             HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence            9999999999999999999999999999999999999987 34567 999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEccccccccc--CCCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTF--GSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      ++++|+++| ++|+++|+|++|+++.+  .+.... .+...+..+++++++|+||.|+++|+|+||++++        ++
T Consensus       174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~  244 (365)
T 3get_A          174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN--------AN  244 (365)
T ss_dssp             HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC--------HH
T ss_pred             HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC--------HH
Confidence            999999999 57999999999998774  333222 2222334467899999999999999999999984        46


Q ss_pred             HHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      +.+.+...... .+++.+.+.++.++++.  ..++++.+++++++++++.+.|+++ ++. + .+..+.|+|+.++..  
T Consensus       245 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~~~~~~~~~~~--  316 (365)
T 3get_A          245 IISAFYKLRAP-FNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDSYTNFITYFFDEK--  316 (365)
T ss_dssp             HHHHHHHHSCT-TCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECSSS--
T ss_pred             HHHHHHHhcCC-CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCCC--
Confidence            77777766544 46889999999999974  4778899999999999999999988 887 4 344566789888642  


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                          +..++...| .++||.+.+|..|+ ++++|++++ +++++++++++|++++
T Consensus       317 ----~~~~~~~~l-~~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          317 ----NSTDLSEKL-LKKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             ----CHHHHHHHH-HTTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHH-HHCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence                356677665 55799999999888 889999998 7899999999998875

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=1.3e-43  Score=335.85  Aligned_cols=326  Identities=23%  Similarity=0.378  Sum_probs=277.2

Q ss_pred             HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH
Q 014631           69 AVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA  148 (421)
Q Consensus        69 a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~  148 (421)
                      ++.+.+... ...|++..|.+++|+++++++.     ++++++|++|+|+++|+..++++++++||+|+++.|+|.++..
T Consensus        47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~  120 (375)
T 3op7_A           47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD  120 (375)
T ss_dssp             HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred             HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence            444555554 3589999999999999999873     3678899999999999999999999999999999999999999


Q ss_pred             HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631          149 NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT  228 (421)
Q Consensus       149 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  228 (421)
                      .+...|.+++.+++++++++.+|++++++.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.
T Consensus       121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~  200 (375)
T 3op7_A          121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS  200 (375)
T ss_dssp             HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred             HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence            99999999999998766778899999999998899999999999999999999999999999999999999999999987


Q ss_pred             cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhh
Q 014631          229 FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFK  307 (421)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  307 (421)
                      +.  +...+..  ..+++++++||||.++++|+|+||++++        +++++.+...... ..+++++.+.++..+++
T Consensus       201 ~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  268 (375)
T 3op7_A          201 EL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAAN--------HQVTDILRDYRDYTMICAGVFDDLVAQLALA  268 (375)
T ss_dssp             SS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECC--------HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred             cc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeC--------HHHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence            65  2222222  2346789999999998899999999984        4688888776543 45677888888888887


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC
Q 014631          308 NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG  387 (421)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~  387 (421)
                      . .+.++++.+++++++++.+.+.|++++++. +..|.++++.|+.++..     .+..+++..+++++||.+.||..|+
T Consensus       269 ~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~  341 (375)
T 3op7_A          269 H-YQEILERNRHILEENLAILDQWIEEEPLVS-YIRPAVVSTSFVKIAVD-----MPMEDFCLQLLQEHGVLLVPGNRFE  341 (375)
T ss_dssp             T-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECCCSSSSCEEEEECCS-----SCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred             c-cHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCCeEEEeEEcCCC-----CCHHHHHHHHHHhCCEEEeChhhhC
Confidence            4 456778888899999999999999888887 44788888888888643     2467788888788999999999998


Q ss_pred             CCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          388 MKNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       388 ~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .++++|++++.+.+++++++++|.++++++.+
T Consensus       342 ~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~  373 (375)
T 3op7_A          342 RDGYVRLGFACEQETLIKGLEKLSQFLRRFDK  373 (375)
T ss_dssp             CTTEEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred             CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence            88999999998889999999999999987754

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=8.4e-44  Score=344.58  Aligned_cols=373  Identities=15%  Similarity=0.146  Sum_probs=290.4

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCCCCHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAV--RSAEFDCYSPSVGILPARRA   94 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~l~~~   94 (421)
                      +++..+++++.++...++++.    .+.+|+|+.|.| +.....+..+.+.+++.+..  .......|.+..|.+++|++
T Consensus        27 ~~~~~~~~~i~~~~~~~~~~~----~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~  102 (448)
T 3meb_A           27 GFPASPPDAILNLTVLYNADT----NPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEA  102 (448)
T ss_dssp             TCCCCCCCTTHHHHHHHHHCC----CTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHH
T ss_pred             cCCCCCCChHHHHHHHHHhCC----CCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHH
Confidence            466667888999988887643    456899999998 43333456788888877665  22334689888999999999


Q ss_pred             HHHHHhhhCCCC---CCCCcEEE--cCCHHHHHHHH--HHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeecc
Q 014631           95 IADYLNSELPCK---LSPDDVYL--TAGCKQAIQVI--LTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLL  163 (421)
Q Consensus        95 ia~~l~~~~~~~---~~~~~i~~--~~g~~~al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~  163 (421)
                      +++++.   |..   +++++|++  |+|++++++++  +..++++||+|++++|+|.++...++    ..|.+++.++..
T Consensus       103 ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~  179 (448)
T 3meb_A          103 AQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYL  179 (448)
T ss_dssp             HHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCB
T ss_pred             HHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecc
Confidence            999983   222   12689999  99999999884  45567899999999999999999999    999999999984


Q ss_pred             CCC-CccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--Ccccc
Q 014631          164 PEK-GWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRM  237 (421)
Q Consensus       164 ~~~-~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~  237 (421)
                      +.+ ++.+|+|++++.+++   +++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.  ....+
T Consensus       180 ~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~  259 (448)
T 3meb_A          180 RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAV  259 (448)
T ss_dssp             CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHH
T ss_pred             ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhH
Confidence            444 678999999998863   567778899999999999999999999999999999999999999887651  11222


Q ss_pred             ccc-CCCCCEEEEcccccccCCCCceEEEE--Ee--------eCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHH
Q 014631          238 GVF-GSTVPVITLGSMSKRWIVPGWRLGWL--VT--------SDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQI  305 (421)
Q Consensus       238 ~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~--~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  305 (421)
                      ..+ +..++++++.||||.|+++|+|+||+  ++        +++. .  .+++.+.+.... ..+.+++.+.+.++..+
T Consensus       260 ~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~  336 (448)
T 3meb_A          260 RMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-L--SAAMVSGMTLQIRKTWSMSAIHGAYIVQVI  336 (448)
T ss_dssp             HHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred             HHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-H--HHHHHHHHHHHHhcccCCccHHHHHHHHHH
Confidence            222 23457899999999999999999998  55        3210 0  014555555543 34557888999999888


Q ss_pred             hhccc-----hhHHHHHHHHHHHHHHHHHHHhhcC--CC------ccccCCCCceeEEEEecCcccccCCCChHHHHHHH
Q 014631          306 FKNTK-----EDFFSKIVDILRDTADICYDRIKEI--PC------ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQL  372 (421)
Q Consensus       306 l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~--~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  372 (421)
                      |....     ...+++.+++++++++.+.+.|+++  ++      +. ...|.+++|.|+.++          .+++..+
T Consensus       337 l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~----------~~~~~~l  405 (448)
T 3meb_A          337 VHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWD-HILTAIGMFTFTGLT----------PEHVDYL  405 (448)
T ss_dssp             HTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCT-HHHHCCSSEEECCCC----------HHHHHHH
T ss_pred             hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccc-eeCCCceEEEecCCC----------HHHHHHH
Confidence            87522     1447788889999999999999876  55      55 336788999997663          3567778


Q ss_pred             HhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHhh
Q 014631          373 AKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       373 l~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++++||.+.||+.       |+|++ .+++++++++++|.++++++.
T Consensus       406 l~~~gV~v~~G~g-------Ris~a~~~~~~i~~~~~~l~~~l~~~~  445 (448)
T 3meb_A          406 KEKWSIYLVKAGG-------RMSMCGLTESNCDYVAEAIHDAVTKLP  445 (448)
T ss_dssp             HHHHCEEECSGGG-------EEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred             HHhCCEEEeCCCc-------EEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence            8889999999862       99998 488889999999999998653

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=2e-44  Score=345.88  Aligned_cols=372  Identities=15%  Similarity=0.125  Sum_probs=288.4

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVD-AVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ++.+++++++++...+++.    .++++|||+.|.| ......++++.+.+++.+ .+.....+.|++..|.+++|++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia   83 (412)
T 1yaa_A            8 IELLPPDALFGIKQRYGQD----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAA   83 (412)
T ss_dssp             CCCCCCCTTHHHHHHHHTC----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHH
T ss_pred             CcccCCCcHHHHHHHHhcC----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHH
Confidence            4555677788888877643    2678999999986 322334578999999999 876444567988899999999999


Q ss_pred             HHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHH--HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCH
Q 014631           97 DYLNSELPCKLSPDDVYL--TAGCKQAIQVILT--VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL  172 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  172 (421)
                      +++...+|..+++++|++  |+|+++++++++.  .++++||+|++++|+|+++...++..|.+++.++....+++++|+
T Consensus        84 ~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  163 (412)
T 1yaa_A           84 KIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDL  163 (412)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECH
T ss_pred             HHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCH
Confidence            999765665567889999  9999999999843  334699999999999999999999999999999872233578999


Q ss_pred             HHHHhhhccC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC--CCcccccccC-CCC--
Q 014631          173 DGLEALADEN---TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS--TPYVRMGVFG-STV--  244 (421)
Q Consensus       173 e~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~-~~~--  244 (421)
                      +++++.++++   +.++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++  ....++..+. ..+  
T Consensus       164 ~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (412)
T 1yaa_A          164 NGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTV  243 (412)
T ss_dssp             HHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTT
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCC
Confidence            9999988653   3445559999999999999999999999999999999999999988764  1222222221 123  


Q ss_pred             -CEEEEcccccccCCCCceEEEEE--e----eCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----h
Q 014631          245 -PVITLGSMSKRWIVPGWRLGWLV--T----SDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----E  311 (421)
Q Consensus       245 -~~i~~~s~sK~~~~~G~r~G~~~--~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~  311 (421)
                       ++++++|+||.|+++|+|+||++  +    .++. .  ...+++.+.... ..+.+++.+.+.++.++|+...     +
T Consensus       244 ~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  320 (412)
T 1yaa_A          244 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKT-I--KPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH  320 (412)
T ss_dssp             CCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred             cceEEEeccCCCCCCcCCcceEEEEEecCCCCCHH-H--HHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHH
Confidence             68999999999988899999998  5    1110 0  012666666532 3345668899999998887632     3


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631          312 DFFSKIVDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM  388 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  388 (421)
                      .++++.+++++++++++.+.|++++   ++. +..|.+++++|+.++         .. .+..+++++||.+.+      
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~-~~~~~l~~~gi~v~~------  383 (412)
T 1yaa_A          321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT---------PQ-MVKRLEETHAVYLVA------  383 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC---------HH-HHHHHHHHHCEECCT------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-eeccCceEEEeeCCC---------HH-HHHHHHHhCCEEecc------
Confidence            5788889999999999999999863   376 446788889886553         33 346777788999986      


Q ss_pred             CCeEEEEec-CCHHHHHHHHHHHHHHHHH
Q 014631          389 KNWLRITFA-IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       389 ~~~iRi~~~-~~~e~l~~~~~~l~~~~~~  416 (421)
                        ++||+++ .+++++++++++|+++++.
T Consensus       384 --~~Ris~~~~~~~~i~~~~~~l~~~~~~  410 (412)
T 1yaa_A          384 --SGRASIAGLNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             --TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             --CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence              4699998 5899999999999998865

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=9.8e-44  Score=337.47  Aligned_cols=375  Identities=15%  Similarity=0.098  Sum_probs=279.0

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i   95 (421)
                      .+++..++++|.++...++++.     .+.|||++|... ....++..+.|++|.+..++....+.|.|..|++++|+++
T Consensus        22 ~~v~~~p~d~i~~l~~~~~~d~-----~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~ai   96 (420)
T 4h51_A           22 QKIQAQAPDVIFDLAKRAAAAK-----GPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEA   96 (420)
T ss_dssp             HTCCCCCCCHHHHHHHHHHHCC-----SSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred             hCCCCCCCChHHHHHHHHhcCC-----CCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHH
Confidence            4677778999999998888753     348999999532 2233566789999998888776666899999999999999


Q ss_pred             HHHHhhhCCCCCCCCcE--EEcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcchHHHHhhcCcee-EeeeccCCCCc
Q 014631           96 ADYLNSELPCKLSPDDV--YLTAGCKQAIQVILTVL----ARPGANILLPKPGFPLYEANARHTRLEI-RHFDLLPEKGW  168 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~~~~g~~~-~~~~~~~~~~~  168 (421)
                      ++++...   ....+++  +-|.|+|.|+...+..+    .+|||+|++++|+|.+|...++..|.+. ..++....+.+
T Consensus        97 a~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~  173 (420)
T 4h51_A           97 VKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV  173 (420)
T ss_dssp             HHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred             HHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence            9998432   2233333  45788888887766554    4699999999999999999999999874 44454444566


Q ss_pred             cCCHHHHHhhh---ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc--c-cccCC
Q 014631          169 EVDLDGLEALA---DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR--M-GVFGS  242 (421)
Q Consensus       169 ~~d~e~l~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~--~-~~~~~  242 (421)
                      .+|.+.+.+.+   .++++++++++||||||..++.+++++|+++|+++++++|+|++|.++.+++.....  + ...+.
T Consensus       174 ~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~  253 (420)
T 4h51_A          174 SLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR  253 (420)
T ss_dssp             EECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred             CCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh
Confidence            78988887765   356777888899999999999999999999999999999999999999876532211  1 11234


Q ss_pred             CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHH
Q 014631          243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSK  316 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~  316 (421)
                      .++++++.||||.|+++|+|+||++++.+.... ...+...+.... ...++++...+.++...+.+..     +..++.
T Consensus       254 ~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~  332 (420)
T 4h51_A          254 GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSA  332 (420)
T ss_dssp             TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             CceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            457899999999999999999999987543111 112333333332 3456788888988888887522     345667


Q ss_pred             HHHHHHHHHHHHHHHhhcC--CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEE
Q 014631          317 IVDILRDTADICYDRIKEI--PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLR  393 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iR  393 (421)
                      .+++++++|+.+.+.|++.  ++ |. ...+++|+|.|+.+.         . ++++ +|+++||++.|+.        |
T Consensus       333 m~~r~~~~R~~l~~~L~~~g~~~~~~-~i~~q~GmF~~~gls---------~-e~v~-~L~e~~Vy~~~~g--------R  392 (420)
T 4h51_A          333 MAERIRTMRRTVYDELLRLQTPGSWE-HVINQIGMFSFLGLS---------K-AQCE-YCQNHNIFITVSG--------R  392 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHCCSSEEECCCC---------H-HHHH-HHHHTTEECCTTC--------E
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCC-eecCCCceEEecCcC---------H-HHHH-HHHhCCEEEcCCC--------E
Confidence            7888999999999999875  22 43 225677999987653         2 3444 5688999998864        9


Q ss_pred             EEec-CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          394 ITFA-IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       394 i~~~-~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      ||++ .++++|+.++++|.+++++..++
T Consensus       393 is~Agl~~~ni~~~a~aI~~vvr~i~re  420 (420)
T 4h51_A          393 ANMAGLTHETALMLAQTINDAVRNVNRE  420 (420)
T ss_dssp             EEGGGCCHHHHHHHHHHHHHHHC-----
T ss_pred             EEeccCCHHHHHHHHHHHHHHHHHhhcC
Confidence            9998 79999999999999999887764

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=1.3e-43  Score=349.34  Aligned_cols=373  Identities=18%  Similarity=0.265  Sum_probs=289.9

Q ss_pred             HHHHHHHHhccccCC------CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhh
Q 014631           29 SALTIIKQNLKENDP------RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-PSVGILPARRAIADYLNS  101 (421)
Q Consensus        29 ~~~~~~~~~~~~~~~------~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~l~~~ia~~l~~  101 (421)
                      ++..++...+..+.+      ..+++|+.|.|.    ++ ++.+.+++.+.+..   ..|+ +..|.+++|+++++++..
T Consensus        82 g~~~~~~~~~~~~~~~g~~~~~~~i~l~~g~~~----~~-~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~  153 (533)
T 3f6t_A           82 GIRERLFAFLDPDKNDEDKFLIDAVNYCHTELG----LN-RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQE  153 (533)
T ss_dssp             THHHHHHHHCCTTTCHHHHHHHHHHHHHHHTTC----CC-HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCcccccHhheeccCCCCC----cC-CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHH
Confidence            344555555543322      247899999877    33 56666676666664   2455 778999999999999976


Q ss_pred             h-CC-CCCC-CCcEEEcCCHHHHHHHHHHH-----hcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC--CCCccCC
Q 014631          102 E-LP-CKLS-PDDVYLTAGCKQAIQVILTV-----LARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP--EKGWEVD  171 (421)
Q Consensus       102 ~-~~-~~~~-~~~i~~~~g~~~al~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~d  171 (421)
                      . .+ .... +++|++|+|+++++..++.+     ++++||+|+++.|+|.++...+...|.+++.++++.  ++++++|
T Consensus       154 ~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d  233 (533)
T 3f6t_A          154 LSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIE  233 (533)
T ss_dssp             HHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEEC
T ss_pred             hcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCC
Confidence            5 33 3444 47999999999999999998     789999999999999999999999999999998865  5678899


Q ss_pred             HHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHH-hcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          172 LDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR-KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       172 ~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                      ++++++.++++++++++++|+||||.++|.+++++|+++|+ +||+++|+||+|+++.+++.   ++.... .+++++++
T Consensus       234 ~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~  309 (533)
T 3f6t_A          234 PNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVY  309 (533)
T ss_dssp             HHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEE
T ss_pred             HHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEe
Confidence            99999999889999999999999999999999999999999 68999999999999876432   222222 35789999


Q ss_pred             ccccccCCCCceEEEEEeeCCCcchhHHHHHHH--------------------------------Hhhhc-ccccCCchH
Q 014631          251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS--------------------------------IKGYL-NISSGPATF  297 (421)
Q Consensus       251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~-~~~~~~~~~  297 (421)
                      ||||.||++|+|+||+++++... .  ..+++.                                +.... ..+.+++.+
T Consensus       310 S~SK~~g~~G~RiG~l~~~~~~~-~--~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~  386 (533)
T 3f6t_A          310 SYSKLFGCTGWRLGVIALNEKNV-F--DDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTP  386 (533)
T ss_dssp             ESHHHHTCGGGCEEEEEEESSCH-H--HHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHH
T ss_pred             cCcccCCCcccceEEEEECcHHH-H--HHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChH
Confidence            99999999999999999975421 1  112221                                12222 234567778


Q ss_pred             HHHH----HHHHhh-----ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc-c-cC-----
Q 014631          298 VQGA----VPQIFK-----NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-L-EG-----  361 (421)
Q Consensus       298 ~~~~----~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~-----  361 (421)
                      .|.+    +..+|.     .....++++.++.++++++.+.+.|. + ++. ...|.+++|+|+.++... . .+     
T Consensus       387 ~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~  463 (533)
T 3f6t_A          387 QQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRD  463 (533)
T ss_dssp             HHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHH
Confidence            8877    345563     22457888999999999999999997 5 666 457889999999886310 0 00     


Q ss_pred             ----CCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631          362 ----ISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       362 ----~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                          ..++.+++.++++++||.+.||+.|+. .+++|+|++ .+++++++++++|.++++++.+
T Consensus       464 ~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~  527 (533)
T 3f6t_A          464 YLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYE  527 (533)
T ss_dssp             HHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence                014567888888899999999998876 579999999 6899999999999999988754

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=2.4e-44  Score=344.97  Aligned_cols=367  Identities=15%  Similarity=0.142  Sum_probs=274.0

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i   95 (421)
                      +++++.+++++++....+++..    .+++|+|+.|.| .    ++.++.+.+++.++. ......|.+..|.+++|+++
T Consensus        18 ~~~~~~~~~~i~~~~~~~~~~~----~~~~i~l~~g~~~d----~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~lr~~i   88 (409)
T 4eu1_A           18 GPGSMGKPDPILGLGQDFRMDP----AKRKVNLSIGVYRD----DADQPFVLECVKQAT-LGTNMDYAPVTGIASFVEEA   88 (409)
T ss_dssp             ---------CHHHHHHHHHHCC----CSSCEECCCSSCCC----TTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHHHHHH
T ss_pred             hcCCCCCCChHHHHHHHHhhCC----CcCceeeeeeEEEC----CCCCEeecHHHHhcC-ccccccCCCCCCcHHHHHHH
Confidence            5678888999999988887654    578999999997 4    334445566666552 23346898999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEE--EcCCHHHHHHHHH---HHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631           96 ADYLNSELPCKLSPDDVY--LTAGCKQAIQVIL---TVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV  170 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i~--~~~g~~~al~~~~---~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  170 (421)
                      ++++....+..+++++|.  .+.|+++++..+.   +.++++||+|++++|+|.++...++..|.+++.+++..++++++
T Consensus        89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  168 (409)
T 4eu1_A           89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL  168 (409)
T ss_dssp             HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred             HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence            999843211112267884  4889999988764   44568999999999999999999999999999999865667889


Q ss_pred             CHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--Cccccccc-CCCC
Q 014631          171 DLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVF-GSTV  244 (421)
Q Consensus       171 d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~~  244 (421)
                      |++++++.++   +.++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++.  ...++..+ +..+
T Consensus       169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~  248 (409)
T 4eu1_A          169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP  248 (409)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred             cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence            9999999885   2455667799999999999999999999999999999999999999887652  11222222 3456


Q ss_pred             CEEEEcccccccCCCCceEEEE--EeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWL--VTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSK  316 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~  316 (421)
                      ++++++||||.|+++|+|+||+  ++++++ .  .+.+.+.+.... ..+.+++.+.+.++..+|+...     ....++
T Consensus       249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  325 (409)
T 4eu1_A          249 NLIVAQSFSKNFGLYGHRCGALHISTASAE-E--AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQ  325 (409)
T ss_dssp             CCEEEEECTTTSSCGGGCCEEEEEECSSHH-H--HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             cEEEEecCcccccCccCCceEEEEEeCCHH-H--HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            7899999999999999999997  554311 0  011555555543 2345777899999988887532     344677


Q ss_pred             HHHHHHHHHHHHHHHhhcCC--C-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEE
Q 014631          317 IVDILRDTADICYDRIKEIP--C-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLR  393 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iR  393 (421)
                      .+++++++++++.+.|+++.  + +. +..|.+++|.|+.++          .+++..+++++||.+.||        .|
T Consensus       326 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gv~v~p~--------~R  386 (409)
T 4eu1_A          326 MSSRIAEVRKRLVSELKACGSVHDWS-HIERQVGMMAYTGLT----------REQVELLRSEYHIYMTLN--------GR  386 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCcc-eecCCceEEEEeCCC----------HHHHHHHHHcCCEEEcCC--------CE
Confidence            88899999999999999862  1 66 336788999986553          355777888889999986        39


Q ss_pred             EEec-CCHHHHHHHHHHHHHHH
Q 014631          394 ITFA-IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       394 i~~~-~~~e~l~~~~~~l~~~~  414 (421)
                      ++++ .+++++++++++|++++
T Consensus       387 i~~~~~~~~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          387 AAVSGLNSTNVEYVSQAIHNVT  408 (409)
T ss_dssp             EEGGGCCTTTHHHHHHHHHHHH
T ss_pred             EEEEecCHhhHHHHHHHHHHHh
Confidence            9998 67788999999998875

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=1.5e-43  Score=340.40  Aligned_cols=372  Identities=20%  Similarity=0.259  Sum_probs=274.0

Q ss_pred             hhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCCCCCCCCCHHHHHHHHHHH
Q 014631           24 TLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE----FDCYSPSVGILPARRAIADYL   99 (421)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~l~~~ia~~l   99 (421)
                      ++.++..+..+.+.   ..++++|+|+.|.|...  .++.+.+.+++.+.+.+..    ...|++..|.+++|+++++++
T Consensus        14 ~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~   88 (417)
T 3g7q_A           14 HSGITRLMEDLNDG---LRTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLL   88 (417)
T ss_dssp             --CHHHHHHHHHC--------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHhh---ccCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHH
Confidence            44555555444322   23578999999987731  1122567777777665421    237999999999999999999


Q ss_pred             hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC-----eEEEc-CCCCcchHHHHhhc----CceeEeeeccCC-CCc
Q 014631          100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA-----NILLP-KPGFPLYEANARHT----RLEIRHFDLLPE-KGW  168 (421)
Q Consensus       100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd-----~Vl~~-~p~y~~~~~~~~~~----g~~~~~~~~~~~-~~~  168 (421)
                      .+.+|+++++++|++|+|+++++++++++++++||     +|+++ +|+|+++...+...    +..+...+++.+ .++
T Consensus        89 ~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (417)
T 3g7q_A           89 RETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKY  168 (417)
T ss_dssp             HHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEE
T ss_pred             HHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCccccc
Confidence            99889889999999999999999999999999987     89997 99999887665322    222333333222 246


Q ss_pred             cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      .+|+++++  +.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.. +....... .+..+++++
T Consensus       169 ~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~i~  244 (417)
T 3g7q_A          169 HVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP-GIIFSEAR-PLWNPNIIL  244 (417)
T ss_dssp             ECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCTTEEE
T ss_pred             ccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc-cccccccc-cCCCCCEEE
Confidence            68999988  677889999999999999999999999999999999999999999986321 11111111 123467899


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHH-HHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSK-IVDILRDTA  325 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~~~~~~~  325 (421)
                      +.|||| ++++|+|+||++++        +++++.+..... ...+++++.+.++..+++... .....+ .++++++++
T Consensus       245 ~~s~sK-~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  315 (417)
T 3g7q_A          245 CMSLSK-LGLPGSRCGIIIAN--------DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRV  315 (417)
T ss_dssp             EEESGG-GTCTTSCCEEEECC--------HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHH
T ss_pred             EEechh-ccCCCcceEEEEeC--------HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence            999999 59999999999985        467777766553 345678899999988887633 233333 667788888


Q ss_pred             HHHHHHhhc-CCC--ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---------CCeEE
Q 014631          326 DICYDRIKE-IPC--ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---------KNWLR  393 (421)
Q Consensus       326 ~~~~~~l~~-~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------~~~iR  393 (421)
                      +.+.+.|.+ +++  +. +..|.+++++|+.++...    .+..++...+ .++||.+.||..|..         ++++|
T Consensus       316 ~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iR  389 (417)
T 3g7q_A          316 QQTIAIIRRYLSEERCL-IHKPEGAIFLWLWFKDLP----ITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMR  389 (417)
T ss_dssp             HHHHHHHHHHCCTTTCE-EECCCBSSEEEEECTTCS----SCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEE
T ss_pred             HHHHHHHHHhcccCCce-eeCCCcceEEEEEcCCCC----CCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEE
Confidence            888888876 554  55 447888999999987421    1466676665 778999999998754         46899


Q ss_pred             EEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          394 ITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       394 i~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +|++.+++++++++++|.++++++.+
T Consensus       390 is~~~~~~~i~~~~~~l~~~l~~~~~  415 (417)
T 3g7q_A          390 MNYVPEPDKIEAGVKILAEEIERAWR  415 (417)
T ss_dssp             EESCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999988764

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=1.1e-42  Score=326.96  Aligned_cols=323  Identities=17%  Similarity=0.301  Sum_probs=263.3

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      ..+|+|+.|.+.    +++++.+  +    +  .....|++. +..++|+++++++      ++++++|++|+|++++++
T Consensus        29 ~~~i~l~~~~~~----~~~~~~v--a----~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~   89 (356)
T 1fg7_A           29 NGDVWLNANEYP----TAVEFQL--T----Q--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE   89 (356)
T ss_dssp             TCSEECSSCCCS----SCCCCCC--C----C--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred             CceEEeeCCCCC----CCCCHhH--h----h--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence            468999999855    3444444  1    1  134678765 4899999999999      467889999999999999


Q ss_pred             HHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          124 VILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       124 ~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .++++++++| |+|++++|+|+++...++..|.+++.++.+  +++.+|++++++.++ +++++++++|+||||.++|.+
T Consensus        90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~  166 (356)
T 1fg7_A           90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ  166 (356)
T ss_dssp             HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999 999999999999999999999999988875  356789999999887 889999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++++|+++|+ +|+++|+||+|+++.. +   .++..+ +..+++++++|+||.|+++|+|+||++++        ++++
T Consensus       167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~  233 (356)
T 1fg7_A          167 DFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI  233 (356)
T ss_dssp             HHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred             HHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC--------HHHH
Confidence            9999999999 9999999999998752 1   122222 34467899999999999999999999985        4577


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+......+ +++++++.++.++|+.....++++.+++++++++++.+.|++++++... .|.+++|+|++++      
T Consensus       234 ~~l~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~------  305 (356)
T 1fg7_A          234 NLLMKVIAPY-PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFK------  305 (356)
T ss_dssp             HHHHHHSCSS-CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEET------
T ss_pred             HHHHHhcCCC-CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE-CCCCCeEEEEECC------
Confidence            7777665433 6888999998888864222348888899999999999999988654313 5667889999886      


Q ss_pred             CCChHHHHHHHHhhcCeeEEe-CCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLP-GMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~-g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                        +..++...| .++||.+.+ |..|+..+++|++++ +++++++++++|+++
T Consensus       306 --~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~-~~~e~~~~~~~l~~~  354 (356)
T 1fg7_A          306 --ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRAE  354 (356)
T ss_dssp             --THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHHTC
T ss_pred             --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC-CHHHHHHHHHHHHhh
Confidence              356677766 778999999 888877789999998 478999999988753

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=1e-43  Score=342.43  Aligned_cols=350  Identities=18%  Similarity=0.172  Sum_probs=276.3

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHH--HHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAV--VDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~--~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ...+|||+.|.|... .+|.++.+.+++  .+.+...  ....|++..|+++||+++++++      ++++++|++|+|+
T Consensus        32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~  104 (427)
T 3ppl_A           32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS  104 (427)
T ss_dssp             TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred             CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence            456799999987621 122233455555  4444432  3568999899999999999999      4788999999999


Q ss_pred             HHHH--HHHHHHhcC--C----------CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCc
Q 014631          119 KQAI--QVILTVLAR--P----------GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENT  183 (421)
Q Consensus       119 ~~al--~~~~~~l~~--~----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~  183 (421)
                      ++++  +++++++++  |          ||+|++++|+|.++...++..|.+++.++++.+   ++|++++++.++ +++
T Consensus       105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~  181 (427)
T 3ppl_A          105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV  181 (427)
T ss_dssp             HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred             HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence            9999  588888876  6          899999999999999999999999999998643   489999999884 567


Q ss_pred             eEEEEe-CCCCCcccccCHHHHHHHHHHH-HhcCcEEEEcccccccccCCCCcc--ccccc----CCCCCEEEEcccccc
Q 014631          184 VAMVIV-NPGNPCGNVFTYQQLQKIAEKA-RKLGIMVISDEVYDHLTFGSTPYV--RMGVF----GSTVPVITLGSMSKR  255 (421)
Q Consensus       184 ~~i~~~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~--~~~~~----~~~~~~i~~~s~sK~  255 (421)
                      ++++++ +||||||.++|.+++++|+++| ++||+++|+||+|+.+.|.+....  ++..+    +..+++++++||||+
T Consensus       182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~  261 (427)
T 3ppl_A          182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI  261 (427)
T ss_dssp             EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred             eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence            777655 7799999999999999999999 999999999999999877765422  23322    345689999999999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc-c-chhHHHHHHHHHHHHHHHHHHHh
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN-T-KEDFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~l  332 (421)
                       +++|+|+||++++        +++++.+..... ...+++.+.|.++..+++. . ...++.+.++.++++++.+.+.|
T Consensus       262 -~~~G~r~G~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L  332 (427)
T 3ppl_A          262 -TLAGAGVSFFLTS--------AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEIL  332 (427)
T ss_dssp             -SCTTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCcCccEEEEEcC--------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             8999999999986        356777766543 3457888999999999875 1 14667788888888888888887


Q ss_pred             hc----CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe-CCCCC-----CCCeEEEEecC-CHH
Q 014631          333 KE----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP-GMAVG-----MKNWLRITFAI-EPS  401 (421)
Q Consensus       333 ~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~iRi~~~~-~~e  401 (421)
                      .+    ++++. +..|.+|+|+|+.++..      +..++.. ++.++||.+.| |..|.     .++++|+|++. +++
T Consensus       333 ~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~  404 (427)
T 3ppl_A          333 DSRLAEYGVAQ-WTVPAGGYFISLDVVPG------TASRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVE  404 (427)
T ss_dssp             HHHHGGGTCCE-ECCCSBSSCEEEECSTT------CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHH
T ss_pred             HHhcCCCCceE-EeCCCccEEEEEECCcc------hHHHHHH-HHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHH
Confidence            64    22455 44788999999999742      3555554 56788999999 55554     35899999994 899


Q ss_pred             HHHHHHHHHHHHHHHhhh
Q 014631          402 ALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       402 ~l~~~~~~l~~~~~~~~~  419 (421)
                      ++++++++|.+++++...
T Consensus       405 ~i~~~~~~l~~~l~~~~~  422 (427)
T 3ppl_A          405 ELEVAMDGVATCVLLAAA  422 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999987643

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=8.7e-43  Score=337.76  Aligned_cols=379  Identities=19%  Similarity=0.297  Sum_probs=288.4

Q ss_pred             hhhhhhhHHHHHHHHHHhccccCCCCee-eccCCCCCCCCCCCCcHHHHHHHHHHHhc-------CC----CCCCCCCCC
Q 014631           20 TATATLTVRSALTIIKQNLKENDPRPII-PLGHGDPSAFPCFRTTPVAADAVVDAVRS-------AE----FDCYSPSVG   87 (421)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-------~~----~~~y~~~~g   87 (421)
                      +..+++.++..+..+.+..   ..+++| +|+.|.|...  .+..+.+.+++.+.+.+       ..    ...|++..|
T Consensus        10 ~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g   84 (444)
T 3if2_A           10 KFTQPTGISQLMDDLGDAL---KSDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQG   84 (444)
T ss_dssp             HHHSCCHHHHHHHHHHHHH---HSSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTC
T ss_pred             hccCchhHHHHHHHHHhhh---cCchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCC
Confidence            3345677888777665543   247899 9999997731  11124556666666544       21    247999999


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC--------------eEEEc-CCCCcchHHH---
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA--------------NILLP-KPGFPLYEAN---  149 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd--------------~Vl~~-~p~y~~~~~~---  149 (421)
                      ++++|+++++|+.+.+|+++++++|++|+|+++++++++++++++||              +|+++ +|+|+++...   
T Consensus        85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~  164 (444)
T 3if2_A           85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE  164 (444)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred             CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence            99999999999999889889999999999999999999999999988              78876 9999988763   


Q ss_pred             ---HhhcCceeEeeeccCCC---CccCCHHHHHhh---hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631          150 ---ARHTRLEIRHFDLLPEK---GWEVDLDGLEAL---ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS  220 (421)
Q Consensus       150 ---~~~~g~~~~~~~~~~~~---~~~~d~e~l~~~---~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  220 (421)
                         ....|..++.++.+.++   ++.+|+++++++   +.++++++++++|+||||.++|.+++++|+++|++||+++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~  244 (444)
T 3if2_A          165 GQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLII  244 (444)
T ss_dssp             SCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred             cchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEE
Confidence               34456777777765322   357999999987   677899999999999999999999999999999999999999


Q ss_pred             cccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHH
Q 014631          221 DEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQ  299 (421)
Q Consensus       221 De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  299 (421)
                      ||+|+.+.. +....... ....++++++.||||+ +++|+|+||++++        +++.+.+..... ...+++++.+
T Consensus       245 De~~~~~~~-~~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~  313 (444)
T 3if2_A          245 DNAYGMPFP-NIIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVAD--------AKVIEAVSAMNAVVNLAPTRFGA  313 (444)
T ss_dssp             ECTTCTTTT-CCBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECC--------HHHHHHHHHHHHHHHSSCCCHHH
T ss_pred             ECCCCCccc-cccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEEC--------HHHHHHHHHHHHhccCCCChHHH
Confidence            999986321 11111111 1224578999999997 8999999999985        357777766543 3356788999


Q ss_pred             HHHHHHhhccc-hhHHHH-HHHHHHHHHHHHHHHhhc-CCC--ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHh
Q 014631          300 GAVPQIFKNTK-EDFFSK-IVDILRDTADICYDRIKE-IPC--ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAK  374 (421)
Q Consensus       300 ~~~~~~l~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~-~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  374 (421)
                      .++..+++... .....+ .++.++++++.+.+.|.+ +++  +. +..|.+++++|+.++...    .+..+++..+ .
T Consensus       314 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~  387 (444)
T 3if2_A          314 AIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLM-IHKPEGAIFLWLWFKDLP----ISTLDLYERL-K  387 (444)
T ss_dssp             HHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEE-EECCCBSSEEEEEETTCS----SCHHHHHHHH-H
T ss_pred             HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-EecCCccEEEEEEcCCCC----CCHHHHHHHH-H
Confidence            99888887533 223333 566788888888888775 454  45 446888999999987421    1466676655 7


Q ss_pred             hcCeeEEeCCCCCCC----------CeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631          375 EESVIVLPGMAVGMK----------NWLRITFAIEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       375 ~~gv~v~~g~~~~~~----------~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      ++||.+.||..|...          +++|++++.+++++++++++|.++++++.+.
T Consensus       388 ~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~~  443 (444)
T 3if2_A          388 AKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYDN  443 (444)
T ss_dssp             HTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHcc
Confidence            789999999988542          5899999989999999999999999887654

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=2.7e-42  Score=325.59  Aligned_cols=336  Identities=17%  Similarity=0.301  Sum_probs=270.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++|||+.|.+.    +++++.+.+++.+.+..  ...|++ .+..++|+++++++      ++++++|++|+|+++++
T Consensus        23 ~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~al   89 (364)
T 1lc5_A           23 PDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESI   89 (364)
T ss_dssp             GGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred             ccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHHH
Confidence            5679999999854    45789999999988765  356754 57899999999998      46678999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..+++++  +||+|++++|+|+++...++..|.+++.++.++++++.+ ++++.+.+.++++++++++|+||||.++|.+
T Consensus        90 ~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~  166 (364)
T 1lc5_A           90 FTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERP  166 (364)
T ss_dssp             HHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHH
Confidence            9999998  679999999999999999999999999998765344443 5666666667788899999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE-eeCCCcchhHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV-TSDPSGILQELRIV  281 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~  281 (421)
                      ++++|+++|++||+++|+||+|+.+.+++...  +...+..++++++.|+||.|+++|+|+||++ ++        ++++
T Consensus       167 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~  236 (364)
T 1lc5_A          167 LLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--------DAAM  236 (364)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--------HHHH
T ss_pred             HHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECC--------HHHH
Confidence            99999999999999999999999987653322  2223445578999999999988999999999 64        4577


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+..... ..+++++.+.++.++|+.  ..++++.+++++++++.+.+.|+++|++. +. +..++|+|+.++.     
T Consensus       237 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-~~~g~~~~~~~~~-----  306 (364)
T 1lc5_A          237 ARMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-VY-PGRANYLLLRCER-----  306 (364)
T ss_dssp             HHHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-EC-CCSSSEEEEEESC-----
T ss_pred             HHHHHhCC-CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCE-EC-CCCCeEEEEECCC-----
Confidence            77766544 347888999999999975  46788899999999999999999888888 43 4556788888763     


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~  418 (421)
                        +..++...+ .++||.+.||..|..  ++++|++++ +.++++++++.|+++++++.
T Consensus       307 --~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~~~~  361 (364)
T 1lc5_A          307 --EDIDLQRRL-LTQRILIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVLTGIA  361 (364)
T ss_dssp             --TTCCHHHHH-HTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC----
T ss_pred             --cHHHHHHHH-HHCCcEEeeCcccCCCCCCEEEEEeC-CHHHHHHHHHHHHHHhhccc
Confidence              133466665 456999999988853  579999987 47788899999988877653

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=2e-43  Score=339.72  Aligned_cols=348  Identities=19%  Similarity=0.194  Sum_probs=273.3

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHH--hcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAV--RSA-EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~--~~~-~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .+|+|+.|.|... .++.++.+.+++.+.+  ... ....|++..|.+++|+++++|+      ++++++|++|+|++++
T Consensus        33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a  105 (422)
T 3d6k_A           33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN  105 (422)
T ss_dssp             CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred             CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence            4899999986411 1356667777776553  121 3568999999999999999999      4778999999999999


Q ss_pred             H--HHHHHHhcCC------------CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEE
Q 014631          122 I--QVILTVLARP------------GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAM  186 (421)
Q Consensus       122 l--~~~~~~l~~~------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i  186 (421)
                      +  .++++++..+            +|+|++++|+|+++...++..|++++.++++.+   ++|++++++.+++ +++++
T Consensus       106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v  182 (422)
T 3d6k_A          106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM  182 (422)
T ss_dssp             HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred             HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence            7  6777777655            357999999999999999999999999998642   4899999998875 67887


Q ss_pred             E-EeCCCCCcccccCHHHHHHHHHHHH-hcCcEEEEcccccc--cccCCCCcccccc----cCCCCCEEEEcccccccCC
Q 014631          187 V-IVNPGNPCGNVFTYQQLQKIAEKAR-KLGIMVISDEVYDH--LTFGSTPYVRMGV----FGSTVPVITLGSMSKRWIV  258 (421)
Q Consensus       187 ~-~~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~--~~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~~~  258 (421)
                      + +++||||||.++|.+++++|+++|+ +||+++|+||+|+.  +...+....++..    .+..+++++++||||+ ++
T Consensus       183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~  261 (422)
T 3d6k_A          183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH  261 (422)
T ss_dssp             EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence            7 6899999999999999999999999 99999999999986  4433323333322    2445679999999999 88


Q ss_pred             CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHhhc-
Q 014631          259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRIKE-  334 (421)
Q Consensus       259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~-  334 (421)
                      +|+|+||++++        +++++.+..... ...+++.+.|.++..+|+...  ..++++.++.++++++.+.+.|.+ 
T Consensus       262 ~GlriG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  333 (422)
T 3d6k_A          262 AGSGVSFFASS--------KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR  333 (422)
T ss_dssp             TTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEeC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999986        357777766543 345788999999999997511  366777888888888888888764 


Q ss_pred             ---CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe-CCCCC-----CCCeEEEEec-CCHHHHH
Q 014631          335 ---IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP-GMAVG-----MKNWLRITFA-IEPSALE  404 (421)
Q Consensus       335 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~iRi~~~-~~~e~l~  404 (421)
                         ++++. +..|++|+|+|+.++..      +...+ ..++.++||.+.| |..|.     ..+++|+|++ .++++++
T Consensus       334 l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~-~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~  405 (422)
T 3d6k_A          334 LSEYGVAK-WTSPTGGYFISVDVVPG------TASRV-VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELE  405 (422)
T ss_dssp             HGGGTCEE-ECCCSBSSCEEEEESTT------CHHHH-HHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHH
T ss_pred             cCcCCceE-EeCCCcceEEEEECCCC------CHHHH-HHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHH
Confidence               32355 34788899999999742      24444 4567889999999 55563     2579999999 7999999


Q ss_pred             HHHHHHHHHHHHhhh
Q 014631          405 EGLGRIKAFCQRHAK  419 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~  419 (421)
                      +++++|++++++..+
T Consensus       406 ~~~~~l~~~l~~~~~  420 (422)
T 3d6k_A          406 VAMDGFATCVLMAAL  420 (422)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999987754

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=3.3e-44  Score=342.58  Aligned_cols=370  Identities=19%  Similarity=0.197  Sum_probs=274.5

Q ss_pred             HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      ++.++++.++.....+++.    .++++|||+.|.+. .....++++.+.+++.+.+.....+.|++..|..++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~   80 (396)
T 2q7w_A            5 ITAAPADPILGLADLFRAD----ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE   80 (396)
T ss_dssp             CCCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred             cccCCCchHHHHHHHHhcc----CCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHH
Confidence            4455566777776655532    25789999999843 122246779999999988765445689888999999999999


Q ss_pred             HHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHH
Q 014631           98 YLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLD  173 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e  173 (421)
                      ++....+..+++++|++  |+|++++++.+++.+.  .+||+|++++|+|+++...++..|.+++.++.++++++.+|++
T Consensus        81 ~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  160 (396)
T 2q7w_A           81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD  160 (396)
T ss_dssp             HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred             HHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHH
Confidence            99654332245789998  9999999999987763  6999999999999999999999999999998864456789999


Q ss_pred             HHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC-CCcccccccCC-CCCEEE
Q 014631          174 GLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS-TPYVRMGVFGS-TVPVIT  248 (421)
Q Consensus       174 ~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-~~~~i~  248 (421)
                      ++++.+++   +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++ ....++..++. .+++++
T Consensus       161 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~  240 (396)
T 2q7w_A          161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV  240 (396)
T ss_dssp             HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred             HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEE
Confidence            99998864   36677889999999999999999999999999999999999999988753 12223332322 357899


Q ss_pred             EcccccccCCCCceEEEEEe--eCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVT--SDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDI  320 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~  320 (421)
                      ++|+||.|+++|+|+||+++  ++++ ..  .++.+.+.... ..+.+++++.+.++.++|+...     ..++++.+++
T Consensus       241 ~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~  317 (396)
T 2q7w_A          241 ASSYSXNFGLYNERVGACTLVAADSE-TV--DRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQR  317 (396)
T ss_dssp             EEECTTTTTCGGGCCEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CH
T ss_pred             EEeccccccccccccceEEEEcCCHH-HH--HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHH
Confidence            99999999889999999997  2211 00  13455544432 2344568899999988887531     3567788889


Q ss_pred             HHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec
Q 014631          321 LRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA  397 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~  397 (421)
                      ++++++.+.+.|+++.   ++. +..|.+++|+|+.++         . +++..+++++||.+.||        +|++++
T Consensus       318 ~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gv~v~~~--------~Ris~~  378 (396)
T 2q7w_A          318 IQRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLT---------K-EQVLRLREEFGVYAVAS--------GRVNVA  378 (396)
T ss_dssp             HHHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGG
T ss_pred             HHHHHHHHHHHHHhcCCCCCcc-eecCCCceEEEecCC---------H-HHHHHHHHhcCeeecCC--------ceEEEe
Confidence            9999999999999873   366 346788899887653         2 35666778889999874        599998


Q ss_pred             -CCHHHHHHHHHHHHHHH
Q 014631          398 -IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~  414 (421)
                       .+++++++++++|++++
T Consensus       379 ~~~~e~i~~~~~~l~~~l  396 (396)
T 2q7w_A          379 GMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             GCCTTTHHHHHHHHHHHC
T ss_pred             ecCHHHHHHHHHHHHhcC
Confidence             58999999999998763

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=5.1e-42  Score=323.30  Aligned_cols=333  Identities=17%  Similarity=0.278  Sum_probs=272.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .+.++|||+.|.+.    +++++.+.+++.+.+...  ..| +..+..++|+++++++      ++++++|++|+|++++
T Consensus        24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~--~~y-~~~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a   90 (361)
T 3ftb_A           24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKNL--GVY-PDVNYRRLNKSIENYL------KLKDIGIVLGNGASEI   90 (361)
T ss_dssp             ----CEETTCCCCT----TCSCHHHHTTHHHHHHGG--GSC-CCTTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred             CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHHh--cCC-CCccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence            37889999999755    467899999999998763  467 4567899999999999      4678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ++.+++++    |+|+++.|+|+++...++..|.+++.++.+++++  ++++++++.+++ ++++++++|+||||.++|.
T Consensus        91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~  163 (361)
T 3ftb_A           91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMC--IDYEDIISKIDD-VDSVIIGNPNNPNGGLINK  163 (361)
T ss_dssp             HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSC--CCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred             HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccC--CCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence            99999887    8999999999999999999999999999875444  677999999987 9999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|+++|++||+++|+||+|+++.++ .........+..+++++++|+||.++++|+|+||+++.+       +++.
T Consensus       164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~  235 (361)
T 3ftb_A          164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA  235 (361)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred             HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence            99999999999999999999999998876 333333334455678999999999999999999998432       4677


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc-ccCCCCceeEEEEecCccccc
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT-CPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      +.+...... .+++++.+.++.++++.  ..++++.+++++++++.+.+.|+++|++. +.  +..+.|+|+.++.    
T Consensus       236 ~~~~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~----  306 (361)
T 3ftb_A          236 AKIKAKQNP-WNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVF--SPHANFVLCRLEN----  306 (361)
T ss_dssp             HHHHTTSCT-TCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE--CCSSSEEEEEESS----
T ss_pred             HHHHhhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceec--CCCCeEEEEEcCC----
Confidence            777766553 47888999999999974  57888999999999999999999988876 33  4446678888864    


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                        .+..++...+. ++||.+.||..|+.  ++++|++++ +.++++++++.|+++.+
T Consensus       307 --~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~  359 (361)
T 3ftb_A          307 --ISGEKLYDSLL-KEDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN  359 (361)
T ss_dssp             --SCHHHHHHHHH-TTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHHHHH-HCCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence              14667777765 45999999998864  579999998 55667777777776654

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=3e-47  Score=363.09  Aligned_cols=352  Identities=18%  Similarity=0.292  Sum_probs=292.6

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      .++++|+.|++.    +++++.+.+++.+++... ...|++.  ..++++++++++.+.+|..+++++|++|+|+++++.
T Consensus        31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~  103 (392)
T 3b1d_A           31 PQLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAIS  103 (392)
Confidence            389999999865    577889999999888653 3467654  789999999999988887788899999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC-CccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK-GWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~  201 (421)
                      .+++++.++||+|+++.|+|+++...+...|.+++.++.++++ +|.+|++++++.+. ++++++++++|+||||.+++.
T Consensus       104 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~  183 (392)
T 3b1d_A          104 IAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWER  183 (392)
Confidence            9999999999999999999999999999999999888875333 46789999999886 578888899999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      +++++|+++|++||+++|+||+|+++.+++....++..++.  .+++++++|+||.|+++|+|+||++++++       +
T Consensus       184 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~  256 (392)
T 3b1d_A          184 EVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------T  256 (392)
Confidence            99999999999999999999999999887765555555543  56789999999999889999999998642       3


Q ss_pred             HHHHHhhhcccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCc
Q 014631          280 IVDSIKGYLNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNL  356 (421)
Q Consensus       280 ~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~  356 (421)
                      +++.+......+  ++++++.+.++.++|+. .+.++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~i~~~~  334 (392)
T 3b1d_A          257 LCAQFKHQQLVNNHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMKPQGTYLIWLDFSD  334 (392)
Confidence            666666554432  35688888888888864 3567888899999999999999987 78888 4578888888988864


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      ..    .+..++...+++++||.+.||..|+.  ++++|++++.+++++++++++|.++++
T Consensus       335 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          335 YG----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP  391 (392)
Confidence            21    13456676665678999999998863  578999999888999999999998875

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1.2e-42  Score=342.37  Aligned_cols=350  Identities=17%  Similarity=0.255  Sum_probs=269.8

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH-hhhCCCCC---CCCcEEEcCCHHHH
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL-NSELPCKL---SPDDVYLTAGCKQA  121 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l-~~~~~~~~---~~~~i~~~~g~~~a  121 (421)
                      +|+|+.|.|.    + +++.+.+++.+.+..   ..|+++.|..++++++++++ .++++.+.   ++++|++|+|++++
T Consensus       106 ~i~l~~g~~~----~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~ea  177 (546)
T 2zy4_A          106 SLSYVRDQLG----L-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAA  177 (546)
T ss_dssp             HHHHHHHTSC----C-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHH
T ss_pred             hhecccCCCC----C-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHH
Confidence            7899999865    3 446666777777643   58999989999999977755 45444322   46899999999999


Q ss_pred             HHHHHHH-----hcCCCCeEEEcCCCCcchHHHHhhc--CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631          122 IQVILTV-----LARPGANILLPKPGFPLYEANARHT--RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP  194 (421)
Q Consensus       122 l~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np  194 (421)
                      +..++.+     ++++||+|++++|+|++|...+...  |.+++.++.+++++|.+|++++++.+.++++++++++|+||
T Consensus       178 l~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NP  257 (546)
T 2zy4_A          178 MAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNP  257 (546)
T ss_dssp             HHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSS
T ss_pred             HHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCC
Confidence            9999987     4789999999999999998876544  67888888877777889999999988778999999999999


Q ss_pred             cccccCHHHHHHHHHHH--HhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          195 CGNVFTYQQLQKIAEKA--RKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       195 tG~~~~~~~l~~i~~~~--~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      ||.+++.+++++|+++|  +++|++||+||+|+++.++.   .++.... .+++++++||||.|+++|+|+||+++++.+
T Consensus       258 tG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~---~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~  333 (546)
T 2zy4_A          258 PSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDF---QSLFAIC-PENTLLVYSFSKYFGATGWRLGVVAAHQQN  333 (546)
T ss_dssp             SCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTC---CCHHHHC-GGGEEEEEESTTTTTCGGGCEEEEEEESSC
T ss_pred             CCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccC---cCHHHhC-CCCEEEEEeCccccCCCCcceEEEEECCHH
Confidence            99999999999999999  78999999999999987532   2332322 357899999999999999999999997532


Q ss_pred             cchhHHHHHHHHhh------------------------------------hc-ccccCCchHHHHHH-----HHHhhccc
Q 014631          273 GILQELRIVDSIKG------------------------------------YL-NISSGPATFVQGAV-----PQIFKNTK  310 (421)
Q Consensus       273 ~~~~~~~~~~~~~~------------------------------------~~-~~~~~~~~~~~~~~-----~~~l~~~~  310 (421)
                             +++.+..                                    .. ..+.+.+.+.|.++     .++++. .
T Consensus       334 -------l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~-~  405 (546)
T 2zy4_A          334 -------VFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE-A  405 (546)
T ss_dssp             -------HHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT-T
T ss_pred             -------HHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc-c
Confidence                   2222210                                    00 11235677777764     234442 3


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc--ccC---------CCChHHHHHHHHhhcCee
Q 014631          311 EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LEG---------ISDDMEFALQLAKEESVI  379 (421)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~ll~~~gv~  379 (421)
                      +.+.++.++.++++++.+.+.|. . ++. ...+.+++|+|++++...  .++         ..++.+++.++++++||.
T Consensus       406 ~~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~  482 (546)
T 2zy4_A          406 DEYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIV  482 (546)
T ss_dssp             CHHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEE
Confidence            57788889999999999999886 4 454 346788999999885200  000         013456677788899999


Q ss_pred             EEeCCCCCC-CCeEEEEecC-CHHHHHHHHHHHHHHHHHhh
Q 014631          380 VLPGMAVGM-KNWLRITFAI-EPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       380 v~~g~~~~~-~~~iRi~~~~-~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +.||..|+. .+++|+|++. +++++++++++|+++++++.
T Consensus       483 v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~  523 (546)
T 2zy4_A          483 LLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELY  523 (546)
T ss_dssp             CEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999976 4689999994 89999999999999988765

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=3e-43  Score=338.86  Aligned_cols=369  Identities=17%  Similarity=0.237  Sum_probs=285.2

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHH--HHHhcC-CCCCC-CCCCCCHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVV--DAVRSA-EFDCY-SPSVGILPAR   92 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~g~~~l~   92 (421)
                      +.+.+.+++..+.+.+...       ....|||+.|.|... .+|.++.+.+++.  +.+..+ ....| ++..|++++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr   76 (423)
T 3ez1_A            5 EASRPALDLARQAYEAFKA-------RGLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSAR   76 (423)
T ss_dssp             -CCHHHHHHHHHHHHHHHH-------HTCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhc-------CCceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHH
Confidence            4455555555555544332       456899999997621 1356677888775  444422 24689 8889999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH--HHHHHhcC--C---------CCeEEEcCCCCcchHHHHhhcCceeEe
Q 014631           93 RAIADYLNSELPCKLSPDDVYLTAGCKQAIQ--VILTVLAR--P---------GANILLPKPGFPLYEANARHTRLEIRH  159 (421)
Q Consensus        93 ~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~--~~~~~l~~--~---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~  159 (421)
                      +++++++      ++++++|++|+|++++++  ++++++++  +         ||+|++++|+|.++...++..|.+++.
T Consensus        77 ~~ia~~~------~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~  150 (423)
T 3ez1_A           77 ALFAGYL------DVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLT  150 (423)
T ss_dssp             HHHHHHT------TSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHh------CCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEe
Confidence            9999998      477899999999999998  88888877  7         599999999999999999999999999


Q ss_pred             eeccCCCCccCCHHHHHhhh--ccCceEEEEe-CCCCCcccccCHHHHHHHHHHH-HhcCcEEEEcccccccccCC-C--
Q 014631          160 FDLLPEKGWEVDLDGLEALA--DENTVAMVIV-NPGNPCGNVFTYQQLQKIAEKA-RKLGIMVISDEVYDHLTFGS-T--  232 (421)
Q Consensus       160 ~~~~~~~~~~~d~e~l~~~~--~~~~~~i~~~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~-~--  232 (421)
                      ++++.+   ++|++++++.+  .+++++++++ +|+||||.+++.+++++|+++| ++||+++|+||+|+.+.+.+ .  
T Consensus       151 v~~~~~---g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~  227 (423)
T 3ez1_A          151 VDMQSD---GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRA  227 (423)
T ss_dssp             EEEETT---EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCC
T ss_pred             ccCCCC---CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCC
Confidence            998643   48999999988  5678888654 8899999999999999999999 99999999999999765544 2  


Q ss_pred             Cccccccc----CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhh
Q 014631          233 PYVRMGVF----GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFK  307 (421)
Q Consensus       233 ~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~  307 (421)
                      ...++..+    +..+++++++||||. +++|+|+||++++        +++++.+..... ...+++.+.|.++..+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  298 (423)
T 3ez1_A          228 EPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGFVASS--------EDNIRWLSKYLGAQSIGPNKVEQARHVKFLT  298 (423)
T ss_dssp             CCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEEEEEC--------HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHH
T ss_pred             CCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEEEEeC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHH
Confidence            22233222    345688999999999 7899999999986        357777766543 345788899999988887


Q ss_pred             c--cc-hhHHHHHHHHHHHHHHHHHHHhhc----CC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCee
Q 014631          308 N--TK-EDFFSKIVDILRDTADICYDRIKE----IP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI  379 (421)
Q Consensus       308 ~--~~-~~~~~~~~~~~~~~~~~~~~~l~~----~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~  379 (421)
                      .  .. ..++.+.++.++++++.+.+.|.+    ++ ++. +..|.+|+|+|+.++..      +... +.++++++||.
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~-~~~~l~~~gv~  370 (423)
T 3ez1_A          299 EYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYAT-WTLPKGGYFISLDTAEP------VADR-VVKLAEAAGVS  370 (423)
T ss_dssp             HSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS------CHHH-HHHHHHHTTEE
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceE-EeCCCccEEEEEECCCC------cHHH-HHHHHHHCCcE
Confidence            5  22 466777777888887777777654    42 255 44788999999999742      3344 44566888999


Q ss_pred             EEe-CCCCCC-----CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631          380 VLP-GMAVGM-----KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       380 v~~-g~~~~~-----~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +.| |..|..     ++++|++++ .+++++++++++|.+++++...
T Consensus       371 v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~  417 (423)
T 3ez1_A          371 LTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLATE  417 (423)
T ss_dssp             CCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999 666642     579999998 5999999999999999987653

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=3.2e-43  Score=335.47  Aligned_cols=368  Identities=14%  Similarity=0.149  Sum_probs=285.5

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSA-FPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i   95 (421)
                      ++++.++++.++++...+++..    +++++||+.|.+.. ....++++.+.+++.+.+.....+.|++..|..++|+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~l   78 (394)
T 2ay1_A            3 GNLKPQAPDKILALMGEFRADP----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAM   78 (394)
T ss_dssp             GGCCCCCCCSHHHHHHHHHHCC----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHH
T ss_pred             ccCccCCCccHHHHHHHHHhCC----CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHH
Confidence            3466777888999888777542    67899999998632 222467899999999987654456898888999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631           96 ADYLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD  171 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d  171 (421)
                      ++++...   +.++++|++  |+|+++|++.+++.+..  +||+|++++|+|+++...++..|.+++.++.++++++++|
T Consensus        79 a~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  155 (394)
T 2ay1_A           79 GELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVD  155 (394)
T ss_dssp             HHHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEEC
T ss_pred             HHHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccC
Confidence            9998421   236789999  99999999999988754  9999999999999999999999999999988654567899


Q ss_pred             HHHHHhhhccC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-CcccccccC-CCCCE
Q 014631          172 LDGLEALADEN---TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMGVFG-STVPV  246 (421)
Q Consensus       172 ~e~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-~~~~~  246 (421)
                      ++++++.+++.   ++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++. ...++..+. ..+++
T Consensus       156 ~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (394)
T 2ay1_A          156 FEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEV  235 (394)
T ss_dssp             HHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSE
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCE
Confidence            99999988643   56677799999999999999999999999999999999999999876531 111222222 13468


Q ss_pred             EEEcccccccCCCCceEEEEEe--eCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHHH
Q 014631          247 ITLGSMSKRWIVPGWRLGWLVT--SDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKIV  318 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~  318 (421)
                      ++++|+||.|+++|+|+||+++  ++++ ..  ..+.+.+.... ..+.+++++.+.++.++|+...     ..+.++.+
T Consensus       236 i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~  312 (394)
T 2ay1_A          236 LIAASCSKNFGIYRERTGCLLALCADAA-TR--ELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVR  312 (394)
T ss_dssp             EEEEECTTTTTCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCCCcCcCCccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence            9999999999889999999997  3211 00  12333333222 2344568899999888887531     35678888


Q ss_pred             HHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631          319 DILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT  395 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~  395 (421)
                      ++++++++++.+.|+++.   ++. +..|.+|+|+|+.++         . +.+..+++++||.+.||        +|++
T Consensus       313 ~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gi~v~~~--------~Ris  373 (394)
T 2ay1_A          313 SGMLRLREQLAGELRDLSGSDRFG-FVAEHRGMFSRLGAT---------P-EQVKRIKEEFGIYMVGD--------SRIN  373 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSTTT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCee-EEcCCceEEEeeCCC---------H-HHHHHHHHhCCEEecCC--------CeEE
Confidence            999999999999998762   366 336777899997664         2 34566778889999875        5999


Q ss_pred             ec-CCHHHHHHHHHHHHHH
Q 014631          396 FA-IEPSALEEGLGRIKAF  413 (421)
Q Consensus       396 ~~-~~~e~l~~~~~~l~~~  413 (421)
                      ++ ++++++++++++|+++
T Consensus       374 ~~~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          374 IAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             GGGCCTTTHHHHHHHHHHH
T ss_pred             eecCCHhhHHHHHHHHHHc
Confidence            98 6899999999999875

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=5.2e-41  Score=315.06  Aligned_cols=327  Identities=15%  Similarity=0.226  Sum_probs=262.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++|||+.|.+.    +++++.+.+++.+.+..  ...|++..+ .++|+++++++      ++++++|++|+|+++++
T Consensus        14 g~~~id~~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~al   80 (350)
T 3fkd_A           14 SSEIVNFSTTVWT----DGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAAF   80 (350)
T ss_dssp             --CCEECSCCSCC----CSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHHH
T ss_pred             cccEEEccCCCCC----CCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            6899999999855    57889999999988743  357877666 99999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeec-cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL-LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +++++++.  ||+|+++.|+|.++...++..|++++.+++ +++++  +++        ++++++++++|+||||.+++.
T Consensus        81 ~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~~  148 (350)
T 3fkd_A           81 YQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQR  148 (350)
T ss_dssp             HHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCCH
Confidence            99999987  999999999999999999999999999987 43333  333        578899999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|+++|+++  ++|+||+|+.+.+.+...  ....+..+++++++||||.++++|+|+||++++        +++.
T Consensus       149 ~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~--------~~~~  216 (350)
T 3fkd_A          149 TEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN--------KDFM  216 (350)
T ss_dssp             HHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC--------HHHH
T ss_pred             HHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeC--------HHHH
Confidence            9999999988765  999999999987665432  234455678899999999999999999999984        4677


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+++.+.+.++..+|+.. ..+.++.++.. ++++.+.+.|+++|++. + .|..+.|+|+.++..    
T Consensus       217 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~-~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~~----  287 (350)
T 3fkd_A          217 KRVAAFSTP-WAVNALAIEAAKFILIHP-AQFTLPIRKWQ-RNTVDFITALNRLDGVE-V-HPSGTTFFLLRLKKG----  287 (350)
T ss_dssp             HHHHTTCCT-TCSCHHHHHHHHHHHHCT-TTTCCCHHHHH-HHHHHHHHHHHHSTTEE-E-CCCSSSEEEEEESSS----
T ss_pred             HHHHHhCCC-CCCCHHHHHHHHHHHhCH-HHHHHHHHHHH-HHHHHHHHHHhcCCCcE-E-CCCCCcEEEEECCCC----
Confidence            888776643 478889999999988753 22334444444 88889999999888988 4 455677888888742    


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~  418 (421)
                        +..++...|++++||.+.||..|+.  .+++|++++ +.+++++++++|++++++..
T Consensus       288 --~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~~~  343 (350)
T 3fkd_A          288 --TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEKYE  343 (350)
T ss_dssp             --CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC--
T ss_pred             --CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHHhc
Confidence              4677777776658999999998865  679999988 66788888888888876643

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=2.2e-40  Score=312.96  Aligned_cols=331  Identities=18%  Similarity=0.247  Sum_probs=270.4

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      .|||+.|.+.    ++.++.+.+++.+.+.+.  ....|++..+ .++++++++++++.+|.++++++|++|+|++++++
T Consensus        32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~  106 (369)
T 3cq5_A           32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ  106 (369)
T ss_dssp             SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred             ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence            4899999864    568899999999988652  2457876655 89999999999988887888899999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .+++++.++||+|++++|+|+++...++..|.+++.++.+  +++.+|++++++.+++ +++++++++|+||||.++|.+
T Consensus       107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~  184 (369)
T 3cq5_A          107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD  184 (369)
T ss_dssp             HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999999999999999998854  4567999999998877 789999999999999999977


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC-CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV-PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++++|++   .+++++|+||+|+.+.++ ..  .+...+..+ +++++.|+||.|+++|+|+||+++++        ++.
T Consensus       185 ~l~~l~~---~~~~~li~De~~~~~~~~-~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~  250 (369)
T 3cq5_A          185 DVERIIN---VAPGIVIVDEAYAEFSPS-PS--ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI  250 (369)
T ss_dssp             HHHHHHH---HCSSEEEEECTTGGGCCS-CC--GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred             HHHHHHH---hCCCEEEEECCchhhcCC-cc--hHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence            7776666   456999999999997643 11  122223344 78999999999988999999999963        466


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+++++.+.++.++++.  ..++++.+++++++++.+.+.|++. |+. +. +..++|+|+.++.     
T Consensus       251 ~~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~~~~~~~~~~~~-----  319 (369)
T 3cq5_A          251 DAVMLVRLP-YHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYA-VV-PSESNFVFFGDFS-----  319 (369)
T ss_dssp             HHHHTTSCT-TCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCE-EE-CCSSSEEEEECCS-----
T ss_pred             HHHHHcCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-EC-CCCCeEEEEECCC-----
Confidence            777665543 36888999999888875  4577888899999999999999875 777 43 4556788888761     


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                        +..++...+ .++||.+.||   +.++++|++++ +++++++++++|+++++
T Consensus       320 --~~~~l~~~l-~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          320 --DQHAAWQAF-LDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             --SHHHHHHHH-HHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred             --CHHHHHHHH-HHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence              456676665 6789999998   23689999998 78999999999998864

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.2e-39  Score=304.12  Aligned_cols=320  Identities=17%  Similarity=0.231  Sum_probs=257.3

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ...+|+|+.+.+.    +++++.+.+++.+....  ...|+ ..+..++|+++++++      ++++++|++|+|+++++
T Consensus        15 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~l   81 (337)
T 3p1t_A           15 AAQAVCLAFNENP----EAVEPRVQAAIAAAAAR--INRYP-FDAEPRVMRKLAEHF------SCPEDNLMLVRGIDECF   81 (337)
T ss_dssp             CCCCEECSSCCCC----SCCCHHHHHHHHHHGGG--TTSCC-TTHHHHHHHHHHHHH------TSCGGGEEEESHHHHHH
T ss_pred             CCCceEeeCCCCC----CCCCHHHHHHHHHhhhh--hccCC-CCchHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence            5689999999743    57889999999998765  45774 568899999999998      46788999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      +.++..+  +||+|++++|+|.++...++..|.+++.++.+.  ++++|++++++.  .+++++++++|+||||.++|.+
T Consensus        82 ~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~  155 (337)
T 3p1t_A           82 DRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAG  155 (337)
T ss_dssp             HHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHH
Confidence            9999988  999999999999999999999999999988753  567999999886  4678999999999999999977


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++.+|   |+++++ +|+||+|+.+...+..  .   ....+++++++|+||.|+++|+|+||++++        +++.+
T Consensus       156 ~l~~l---~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~  218 (337)
T 3p1t_A          156 ELDQL---RQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGP--------SELIA  218 (337)
T ss_dssp             HHHHH---HHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECC--------HHHHH
T ss_pred             HHHHH---HHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeC--------HHHHH
Confidence            76655   557786 5669999987643321  1   223456899999999998999999999985        45777


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .+..... ..+++.+.+.++..+++.  ..++.+..+++.++++.+.+.|+++ |+. +..+. +.|+|+..+.      
T Consensus       219 ~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-~~~~~~~~~~------  286 (337)
T 3p1t_A          219 AMKRKQW-FCNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-VASSE-ANFVLVENAA------  286 (337)
T ss_dssp             HHHTTSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCS-SSEEEEECTT------
T ss_pred             HHHhhcC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-ECCCC-CeEEEEEcCC------
Confidence            7766543 357788899998888874  3456677777888899999999988 887 43444 5566766642      


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                        ..++. .+++++||.+.||..|+.++++|+|++ +++++++++++|+++.
T Consensus       287 --~~~~~-~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~  334 (337)
T 3p1t_A          287 --GERTL-RFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYS  334 (337)
T ss_dssp             --THHHH-HHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred             --HHHHH-HHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHh
Confidence              33444 456788999999999988899999998 6789999999988765

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=5.4e-42  Score=326.06  Aligned_cols=331  Identities=18%  Similarity=0.203  Sum_probs=255.3

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHh--c-CCCCCCCCCCCC-----HHHHHHHHHHHhhhCCCCCCC-CcE
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVR--S-AEFDCYSPSVGI-----LPARRAIADYLNSELPCKLSP-DDV  112 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~--~-~~~~~y~~~~g~-----~~l~~~ia~~l~~~~~~~~~~-~~i  112 (421)
                      .+.++|+|+.|.|+    ++.++.+.+++.+...  . .....|++..|.     ++||+++|+|++ .+|..+.+ ++|
T Consensus        20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i   94 (391)
T 3bwn_A           20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI   94 (391)
T ss_dssp             TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence            47789999999976    4555666665533321  1 134579999998     999999999998 46777777 599


Q ss_pred             EEcCCHHHHHHHHHHHhcCCCC----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631          113 YLTAGCKQAIQVILTVLARPGA----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI  188 (421)
Q Consensus       113 ~~~~g~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~  188 (421)
                      ++|+|+++++++++++++++||    +|++++|+|.++...++..|++++.++++.+ +  +.        .++++++++
T Consensus        95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l  163 (391)
T 3bwn_A           95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV  163 (391)
T ss_dssp             EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred             EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence            9999999999999999999999    9999999999999999999999988887532 2  22        256889999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      ++||||||.+++     +|++.++.+++++|+||+|..    +. ..++..  ..+++++++||||.|+++|+|+||+++
T Consensus       164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~~-~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~  231 (391)
T 3bwn_A          164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----PH-YTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV  231 (391)
T ss_dssp             ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----TT-TSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred             CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----CC-CCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence            999999999986     344422223399999999974    21 223322  345789999999999999999999997


Q ss_pred             eCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc---------hhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631          269 SDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK---------EDFFSKIVDILRDTADICYDRIKEIPCI  338 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~g~  338 (421)
                      ++       +++++.+..... ...+++.+.|.++..+|+...         +.++++.+++++++++.+.+.|+++|++
T Consensus       232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  304 (391)
T 3bwn_A          232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF  304 (391)
T ss_dssp             CC-------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred             cC-------HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            32       357777766653 245788899999999987532         4678899999999999999999988777


Q ss_pred             cccCCC-------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEecCCHHHHH
Q 014631          339 TCPRKP-------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFAIEPSALE  404 (421)
Q Consensus       339 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~~~~e~l~  404 (421)
                      . +..|             .+|+|+|+.++.        . +++..+++++||.+.||..|+. .+++|+|++.++++++
T Consensus       305 ~-~~~p~~~~~~f~~~~~~~~g~~~~~~~~~--------~-~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~  374 (391)
T 3bwn_A          305 T-LPKYPEAFCNYFGKSLESYPAFAWLGTKE--------E-TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFN  374 (391)
T ss_dssp             E-CCCCCCEEETTTTEEECCCCSEEEEEESS--------S-CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHH
T ss_pred             c-cccCCccccccccccCCCcceEEEecCCc--------H-HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHH
Confidence            6 3233             445689998863        1 2345567889999999999976 6799999999999999


Q ss_pred             HHHHHHHHHHHHh
Q 014631          405 EGLGRIKAFCQRH  417 (421)
Q Consensus       405 ~~~~~l~~~~~~~  417 (421)
                      +++++|++++++.
T Consensus       375 ~~~~~L~~~~~~~  387 (391)
T 3bwn_A          375 VFLERLANMKLIK  387 (391)
T ss_dssp             HHHHHHHSCC---
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999887653

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=1.2e-39  Score=307.00  Aligned_cols=330  Identities=16%  Similarity=0.298  Sum_probs=265.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .+..+|+|+.|.+.    +++++.+.+++.+.+...  ....|+. .+..++|+++++++      ++++++|++|+|++
T Consensus        24 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~------g~~~~~i~~t~g~~   92 (360)
T 3hdo_A           24 DIASWIKLNTNENP----YPPSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELY------GFDPSWIIMANGSD   92 (360)
T ss_dssp             CCTTSEECSSCCCS----SCCCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred             cccceeeccCCCCC----CCCCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence            36789999999865    678999999999998763  1346754 45799999999999      36789999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631          120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF  199 (421)
Q Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~  199 (421)
                      ++++.++++++++||+|++++|+|.++...++..|.+++.++.+.  ++.+  +++++.+  +++++++++|+||||.++
T Consensus        93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~  166 (360)
T 3hdo_A           93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF  166 (360)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence            999999999999999999999999999999999999999998753  3334  5554443  356889999999999999


Q ss_pred             CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                      +.+++   .++|+++|+++|+||+|+++.  +.....+  .+..+++++++|+||.|+++|+|+||++++        ++
T Consensus       167 ~~~~l---~~l~~~~~~~li~De~~~~~~--~~~~~~~--~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~  231 (360)
T 3hdo_A          167 PLEYI---DELARRCAGMLVLDETYAEFA--ESNALEL--VRRHENVVVTRTLSKSYSLAGMRIGLAIAR--------PE  231 (360)
T ss_dssp             CHHHH---HHHHHHBSSEEEEECTTGGGS--SCCCTHH--HHHCSSEEEEEESTTTTSCTTSCCEEEECC--------HH
T ss_pred             CHHHH---HHHHHHCCCEEEEECChHhhC--CcchhHH--hccCCCEEEEecchHhhcCCccceeeEeeC--------HH
Confidence            87655   556678999999999999863  3322222  233467899999999999999999999984        46


Q ss_pred             HHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      +.+.+...... .+++++.+.++.++|+.  ..++++.+++++++++++.+.|+++ ++. + .+..+.|+|+.++..  
T Consensus       232 ~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~~~~~~~--  303 (360)
T 3hdo_A          232 VIAALDKIRDH-YNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYD-V-IPSQGNYLFATPPDR--  303 (360)
T ss_dssp             HHHHHHHHSCS-CCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECTTC--
T ss_pred             HHHHHHHhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCCCccEEEEECCCC--
Confidence            77777766543 47889999999999975  5678899999999999999999988 887 4 355577888877531  


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                          +..++...+ .++||.+.++..+..++++|++++ +++++++++++|+++.+..
T Consensus       304 ----~~~~l~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~~  355 (360)
T 3hdo_A          304 ----DGKRVYDGL-YARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEGH  355 (360)
T ss_dssp             ----CHHHHHHHH-HHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC--
T ss_pred             ----CHHHHHHHH-HHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhccc
Confidence                456666654 678999999877556789999998 7899999999999886544

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=3.4e-41  Score=323.68  Aligned_cols=331  Identities=15%  Similarity=0.181  Sum_probs=265.3

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCC-C---CHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD--CYSPSV-G---ILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~-g---~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ...+|+|+.|.|.    ++.++.+++++.+.+......  .|++.. |   .++||+++++|+++..+..+++++|++|+
T Consensus        55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~  130 (427)
T 2hox_A           55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV  130 (427)
T ss_dssp             TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred             CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence            4578999999975    466788888888777432222  488888 8   99999999999998776667899999999


Q ss_pred             CHHHHHHHHHHHh--------cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631          117 GCKQAIQVILTVL--------ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI  188 (421)
Q Consensus       117 g~~~al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~  188 (421)
                      |+++++++++.++        +++||+|+++.|+|.++...++..|.+++.        +.+|++++++.++++++++++
T Consensus       131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~k~v~l  202 (427)
T 2hox_A          131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEMV  202 (427)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEEE
T ss_pred             CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee--------ecCCHHHHHHhhcCCceEEEE
Confidence            9999999999999        899999999999999999999999988764        346788898888878899999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      ++||||||.+++ +.+       +  ++..+.|+++.+    .  ..++..+. .+++++++||||.|+++|+|+||+++
T Consensus       203 ~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~----~--~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~  265 (427)
T 2hox_A          203 TSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW----P--HYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI  265 (427)
T ss_dssp             ESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS----T--TTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred             cCCCCCcccccH-HHH-------c--CCCEEEeecccC----C--CCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence            999999999999 422       2  556778877743    1  12233333 45789999999999999999999999


Q ss_pred             eCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhcc----------chhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          269 SDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNT----------KEDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      ++       +++++.+...... ..+++.+.|.++..+|+..          .+.++++.+++++++++.+.+.|++++|
T Consensus       266 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g  338 (427)
T 2hox_A          266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR  338 (427)
T ss_dssp             CC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred             CC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence            53       3577777766542 3578889999988888752          1356677889999999999999998877


Q ss_pred             ccc--c-----------CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEecCCHHHH
Q 014631          338 ITC--P-----------RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFAIEPSAL  403 (421)
Q Consensus       338 ~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~~~~e~l  403 (421)
                      +.+  .           ..|.+++|+|++++.       +..+++..+++++||.++||..|+. ++++|+|++.+++++
T Consensus       339 ~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l  411 (427)
T 2hox_A          339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDF  411 (427)
T ss_dssp             EECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHH
T ss_pred             ccccccccccccccccccCCCCceEEEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHH
Confidence            663  1           135668999999864       2345677777788999999998876 789999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 014631          404 EEGLGRIKAFCQR  416 (421)
Q Consensus       404 ~~~~~~l~~~~~~  416 (421)
                      ++++++|.+++++
T Consensus       412 ~~~l~~l~~~~~~  424 (427)
T 2hox_A          412 DQLMYYLKDMVKA  424 (427)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998754

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=8e-39  Score=298.29  Aligned_cols=316  Identities=18%  Similarity=0.269  Sum_probs=253.3

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      .++++|+.|.+.    ++.++.+.+++.+.+.......|+. .+..++|+++++++++.   .+++++|++|+|++++++
T Consensus        19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~   90 (335)
T 1uu1_A           19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY   90 (335)
T ss_dssp             CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred             CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence            468999999864    4678999999998874333456754 46899999999999643   256889999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      .+++++   ||+|+++ |+|+++...++..|.+++.++.+  +++.+|++++     ++++++++++|+||||.++|.++
T Consensus        91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~  159 (335)
T 1uu1_A           91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE  159 (335)
T ss_dssp             HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred             HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence            999988   8999999 99999999999999999888874  3466888776     46888989999999999999999


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      +++|+++|   | ++|+||+|+++...  ..  +..++..+++++++|+||.|+++|+|+||++++        +++++.
T Consensus       160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~~  223 (335)
T 1uu1_A          160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFIDA  223 (335)
T ss_dssp             HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC--------HHHHHH
T ss_pred             HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeC--------HHHHHH
Confidence            99888877   7 89999999986532  21  222344557899999999998899999999995        357777


Q ss_pred             HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631          284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS  363 (421)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (421)
                      +...... .+++++.+.++.++|+.  ..++++.+++++++++++.+.|+++ |+. + .|.+++|+|+.++..      
T Consensus       224 l~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~~------  291 (335)
T 1uu1_A          224 YNRVRLP-FNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFVFMEKE------  291 (335)
T ss_dssp             HHHHSCT-TCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECCTH------
T ss_pred             HHHhcCC-CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCCCeEEEEECCCC------
Confidence            7665433 47888999999999975  4578888899999999999999987 776 4 456678899888631      


Q ss_pred             ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          364 DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       364 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      +..++...+ .++||.+.|+     ++++|+|++. .+++++++++|+++
T Consensus       292 ~~~~~~~~l-~~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          292 EKERLLEHL-RTKNVAVRSF-----REGVRITIGK-REENDMILRELEVF  334 (335)
T ss_dssp             HHHHHHHHH-HHHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred             CHHHHHHHH-HHCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence            245666665 4679999983     4789999975 57799999988754

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=2.3e-37  Score=295.32  Aligned_cols=337  Identities=14%  Similarity=0.133  Sum_probs=260.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      +..++||+.|.|   +++++++.+.+++.+.+....  ...|.+..|..++++.+++++.+.+|    .+++++|+|+++
T Consensus        42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt~  114 (398)
T 3a2b_A           42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGFQ  114 (398)
T ss_dssp             TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHHH
T ss_pred             CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHHH
Confidence            567899999975   234578999999999886532  22455667778888888888888766    358999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCCCCCcc
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNPGNPCG  196 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p~nptG  196 (421)
                      ++..+++++.++||.|++++|+|.++...++..|.+++.++.       +|++++++.+++    +++++++++|+||||
T Consensus       115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG  187 (398)
T 3a2b_A          115 SNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG  187 (398)
T ss_dssp             HHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred             HHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence            999999999999999999999999999999999999988875       478999988865    688899999999999


Q ss_pred             cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631          197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTSDPSGIL  275 (421)
Q Consensus       197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  275 (421)
                      .+++   +++|.++|++||+++|+||+|+.+.++.........++..++ .++++|+||+++.+|   ||++++      
T Consensus       188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~------  255 (398)
T 3a2b_A          188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD------  255 (398)
T ss_dssp             CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC------
T ss_pred             CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC------
Confidence            9976   889999999999999999999987653221111122222233 488999999998778   999985      


Q ss_pred             hHHHHHHHHhhhc--ccccCCchHHHH-HHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631          276 QELRIVDSIKGYL--NISSGPATFVQG-AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV  352 (421)
Q Consensus       276 ~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~  352 (421)
                        +++++.+....  ....+.+.+.+. ++.++|+.  ..+.++.+++++++++++.+.|+++ |+. +..|. ++++|+
T Consensus       256 --~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-g~~~~~  328 (398)
T 3a2b_A          256 --ADVIDFLKHNARSVMFSASMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDH-GFD-LGATE-SPILPI  328 (398)
T ss_dssp             --HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHT-TCC-BCSCC-SSEEEE
T ss_pred             --HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhc-CCC-cCCCC-CCEEEE
Confidence              35667666532  222334445554 45577764  2345678889999999999999988 877 43454 688998


Q ss_pred             ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      .++...     +..++...++ ++||.+.||..|..   .+++|++++  ++++++++++++|+++++++.
T Consensus       329 ~~~~~~-----~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~  393 (398)
T 3a2b_A          329 FIRSNE-----KTFWVTKMLQ-DDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE  393 (398)
T ss_dssp             ECCCHH-----HHHHHHHHHH-HTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred             EcCCHH-----HHHHHHHHHH-HCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence            886321     2456666665 45999999988753   578999998  599999999999999998764

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=1.9e-36  Score=290.98  Aligned_cols=336  Identities=14%  Similarity=0.203  Sum_probs=254.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE------FDCYSP--SVGILPARRAIADYLNSELPCKL-SPDDVY  113 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~  113 (421)
                      +.++++|+.|.+.     +.|+.+.+++.+.+....      ...|++  ..+..++++.++++++      . ++++++
T Consensus        26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~   94 (420)
T 1t3i_A           26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIV   94 (420)
T ss_dssp             TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence            3458999999865     567899999999887521      123443  3567889999999984      3 578999


Q ss_pred             EcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631          114 LTAGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA  185 (421)
Q Consensus       114 ~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~  185 (421)
                      +|+|+++++..++.++    .++||+|++++|+|++    +...++..|.+++.++.+  .++.+|++++++.+++++++
T Consensus        95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~  172 (420)
T 1t3i_A           95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL  172 (420)
T ss_dssp             EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred             EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence            9999999999999999    8999999999999998    556677889999998875  45668999999999888999


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      |++++|+||||.+++   +++|.++|++||+++|+|++|+.+..    ...+..++   ..+++.|+||.++.+|  +||
T Consensus       173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~~---~di~~~s~sK~~~~~g--~G~  240 (420)
T 1t3i_A          173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLID---CDWLVASGHKMCAPTG--IGF  240 (420)
T ss_dssp             EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHHT---CSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhcC---CCEEEEehhhhcCCCc--eEE
Confidence            999999999999988   88999999999999999999987432    11222332   3488899999887777  899


Q ss_pred             EEeeCCCcchhHHHHHHHHhhhcc---------------------cccCCchHHHHHHH-HHhhccchhHHHHHHHHHHH
Q 014631          266 LVTSDPSGILQELRIVDSIKGYLN---------------------ISSGPATFVQGAVP-QIFKNTKEDFFSKIVDILRD  323 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~  323 (421)
                      ++++        +++.+.+.....                     ...+.+.+.+.++. .+++...+.++++..+++++
T Consensus       241 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~  312 (420)
T 1t3i_A          241 LYGK--------EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE  312 (420)
T ss_dssp             EEEC--------HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EEEc--------hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            9985        356676654431                     11234445555433 34543223457788899999


Q ss_pred             HHHHHHHHhhcCCCccccCCCC-----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------CCCC
Q 014631          324 TADICYDRIKEIPCITCPRKPE-----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------GMKN  390 (421)
Q Consensus       324 ~~~~~~~~l~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~  390 (421)
                      +++++.+.|++++++.+. .|.     .+.++++.++..      +..++.. .+.++||.+.+|..|        +.++
T Consensus       313 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~l~~~gi~v~~~~~~~~~~~~~~g~~~  384 (420)
T 1t3i_A          313 LTHYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNVAGL------HASDVAT-MVDQDGIAIRSGHHCTQPLHRLFDASG  384 (420)
T ss_dssp             HHHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEETTB------CHHHHHH-HHHTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred             HHHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEECCC------CHHHHHH-HHHHCCeEEeeccccchHHHHhcCCCC
Confidence            999999999998888743 443     244555566521      3556654 557789999998644        3367


Q ss_pred             eEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          391 WLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       391 ~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++|++++  ++++++++++++|+++++++++
T Consensus       385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~  415 (420)
T 1t3i_A          385 SARASLYFYNTKEEIDLFLQSLQATIRFFSD  415 (420)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred             eEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            8999998  5899999999999999887653

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=3.9e-36  Score=287.47  Aligned_cols=333  Identities=14%  Similarity=0.165  Sum_probs=252.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC------CCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDC------YSPSVGILPARRAIADYLNSELPCKL-SPDDVY  113 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~  113 (421)
                      |.++++|+.+.+.     +.++.+.+++.+.+....  .+.      |.+..+..++++.++++++      . ++++|+
T Consensus        21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~   89 (406)
T 1kmj_A           21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN------ARSAEELV   89 (406)
T ss_dssp             TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence            4568999999865     467899999999987531  111      1234567889999999873      3 578999


Q ss_pred             EcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631          114 LTAGCKQAIQVILTVL----ARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA  185 (421)
Q Consensus       114 ~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~  185 (421)
                      +|+|+++++..++.++    .++||+|+++.|+|++..    ..++..|.+++.++.+.  ++.+|++++++.+++++++
T Consensus        90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~  167 (406)
T 1kmj_A           90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL  167 (406)
T ss_dssp             EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred             EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence            9999999999999999    899999999999998653    34667899999988753  4568999999999888999


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW  265 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  265 (421)
                      |++++|+||||.+++   +++|.++|++||+++|+|++|+.+.    ....+..+   +..+++.|+||.++.+|  +||
T Consensus       168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~----~~~~~~~~---~~d~~~~s~~K~~g~~G--~G~  235 (406)
T 1kmj_A          168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMH----HPVDVQAL---DCDFYVFSGHKLYGPTG--IGI  235 (406)
T ss_dssp             EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCC----CCCccccc---CCCEEEEEchhccCCCC--cEE
Confidence            999999999999988   8899999999999999999998732    11122222   24588899999998777  899


Q ss_pred             EEeeCCCcchhHHHHHHHHhhhcc----------------------cccCCchHHHHHHH-HHhhccchhHHHHHHHHHH
Q 014631          266 LVTSDPSGILQELRIVDSIKGYLN----------------------ISSGPATFVQGAVP-QIFKNTKEDFFSKIVDILR  322 (421)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~  322 (421)
                      ++++        +++++.+.....                      ...+.+.+.+.++. ++++...+.++++..++++
T Consensus       236 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~  307 (406)
T 1kmj_A          236 LYVK--------EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ  307 (406)
T ss_dssp             EEEC--------HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             EEEe--------HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            9985        356666654321                      11223445554433 5555432346778888999


Q ss_pred             HHHHHHHHHhhcCCCccccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------CCCCeE
Q 014631          323 DTADICYDRIKEIPCITCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------GMKNWL  392 (421)
Q Consensus       323 ~~~~~~~~~l~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~i  392 (421)
                      ++++++.+.|+++|++.+. .+  .++++. +.++.      .+..++.. .+.++||.+.+|..|        +.++++
T Consensus       308 ~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~-~~~~~------~~~~~~~~-~l~~~gi~v~~g~~~~~~~~~~~g~~~~i  378 (406)
T 1kmj_A          308 NLMHYALSQLESVPDLTLY-GPQNRLGVIA-FNLGK------HHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMC  378 (406)
T ss_dssp             HHHHHHHHHHTTSTTEEEE-SCTTCCSEEE-EEETT------CCHHHHHH-HHHHTTEECEEECTTCHHHHHHTTCSCEE
T ss_pred             HHHHHHHHHHhcCCCeEEe-cCCCcCCEEE-EEECC------CCHHHHHH-HHhhCCcEEEeccccchHHHHhcCCCCeE
Confidence            9999999999998888743 55  555444 45642      13556664 457789999998754        336899


Q ss_pred             EEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          393 RITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       393 Ri~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      |++++  +++++++++++.|+++++.+
T Consensus       379 Ris~~~~~t~~~i~~~~~~l~~~~~~l  405 (406)
T 1kmj_A          379 RASLAMYNTHEEVDRLVTGLQRIHRLL  405 (406)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence            99998  59999999999999998765

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=100.00  E-value=4.8e-36  Score=285.75  Aligned_cols=318  Identities=12%  Similarity=0.138  Sum_probs=248.2

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEc
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLP  139 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~  139 (421)
                      +.++.+.+++.+.+..    .|++.  ..++++.+++++.+.+|  .+++ ++++|+|+++++..++.+++++||+|+++
T Consensus        44 ~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g--~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~  115 (393)
T 1vjo_A           44 NAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQ--TENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG  115 (393)
T ss_dssp             CCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHT--CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhC--CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence            5678888888765432    45432  45777888888877766  3567 89999999999999999999999999999


Q ss_pred             CCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631          140 KPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI  216 (421)
Q Consensus       140 ~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~  216 (421)
                      +|+|++  +...++..|++++.++.+.  ++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|+++|+
T Consensus       116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  190 (393)
T 1vjo_A          116 VAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGT  190 (393)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTC
T ss_pred             cCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCC
Confidence            999999  8888899999999998754  456899999999887 8899999999999999976   7889999999999


Q ss_pred             EEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh---------
Q 014631          217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY---------  287 (421)
Q Consensus       217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~---------  287 (421)
                      ++|+||+|+.    |.....+   ...+..+++.|+||+++.++ |+||++++        +++++.+...         
T Consensus       191 ~li~Dea~~~----g~~~~~~---~~~~~di~~~s~sK~l~~~~-~~G~l~~~--------~~~~~~~~~~~~~~~~~~~  254 (393)
T 1vjo_A          191 LLLVDTVTSL----GGVPIFL---DAWGVDLAYSCSQKGLGCSP-GASPFTMS--------SRAIEKLQRRRTKVANWYL  254 (393)
T ss_dssp             EEEEECTTTT----TTSCCCT---TTTTCSEEECCSSSTTCSCS-SCEEEEEC--------HHHHHHHHTCSSCCSCSTT
T ss_pred             EEEEECCccc----cCcCCcc---cccCccEEEEcCcccccCCC-ceEEEEEC--------HHHHHHHhccCCCCCceec
Confidence            9999999993    2222222   22334588999999988887 99999996        3466665321         


Q ss_pred             -----------ccccc-CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc---eeEEEE
Q 014631          288 -----------LNISS-GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG---SMFVMV  352 (421)
Q Consensus       288 -----------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---~~~~~~  352 (421)
                                 ..... +++.+.+.++.++++...+.++++.+++++++++++.+.|+++ ++. +..|.+   +.++++
T Consensus       255 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~  332 (393)
T 1vjo_A          255 DMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLS-LHVEKEYRLPTLTTV  332 (393)
T ss_dssp             CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCGGGBCSSEEEE
T ss_pred             CcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCccccCCcEEEE
Confidence                       01122 6788889988888875334567888999999999999999988 887 435543   346677


Q ss_pred             ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHH
Q 014631          353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~~~  414 (421)
                      .++..     .+..++...+++++||.+.||..|..++++|+++ +  .+++++++++++|++++
T Consensus       333 ~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          333 CIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             ECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EcCCC-----CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence            76532     1466777776555599999999887789999995 3  56778999999999876

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.1e-35  Score=282.38  Aligned_cols=323  Identities=13%  Similarity=0.104  Sum_probs=250.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK  140 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~  140 (421)
                      +.++.+.+++.+.+.    ..|++.  ..++++.+++++.+.+|.+ +++++++|+|+++++..++.+++++||+|++++
T Consensus        30 ~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~  102 (386)
T 2dr1_A           30 ACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTI  102 (386)
T ss_dssp             CCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEc
Confidence            567888887766543    245432  2678888888888777754 467899999999999999999999999999999


Q ss_pred             CCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh--ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631          141 PGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA--DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI  216 (421)
Q Consensus       141 p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~--~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~  216 (421)
                      |+|++  +...+...|++++.++.+.  ++.+|++++++.+  .++++++++++|+||||.+.+   +++|.++|++||+
T Consensus       103 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  177 (386)
T 2dr1_A          103 IGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDK  177 (386)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred             CCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCC
Confidence            99998  8888899999999998754  4568999999988  457899999999999999965   7999999999999


Q ss_pred             EEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh-----------
Q 014631          217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK-----------  285 (421)
Q Consensus       217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~-----------  285 (421)
                      ++|+|++|+.+.+.    .++..   .+..+++.|+||+++.++ ++||+++++        ++.+.+.           
T Consensus       178 ~li~D~a~~~~~~~----~~~~~---~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~~  241 (386)
T 2dr1_A          178 LVFVDAVSAMGGAD----IKFDK---WGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFDI  241 (386)
T ss_dssp             EEEEECTTTBTTBC----CCTTT---TTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTCH
T ss_pred             eEEEEccccccCcc----ccccc---cCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEeH
Confidence            99999999975431    12222   234588999999987662 389999963        4555442           


Q ss_pred             -----hh---cccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC---ceeEEEEe
Q 014631          286 -----GY---LNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRKPE---GSMFVMVK  353 (421)
Q Consensus       286 -----~~---~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~---~~~~~~~~  353 (421)
                           ..   ....++++.+.+.++.++++..... ++++.+++++++++++.+.|+++ ++.+. .+.   .+.++|+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~  319 (386)
T 2dr1_A          242 PLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDIL-AEPGHESPTITAVL  319 (386)
T ss_dssp             HHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCTTCBCSSEEEEE
T ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeC-cCccccCCceEEEE
Confidence                 11   1223467888888888888753223 47888999999999999999988 87733 453   36788888


Q ss_pred             cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++..     .+..++...|.+ +||.+.+|..+...+++|++++  ++++++++++++|+++++++..
T Consensus       320 ~~~~-----~~~~~~~~~l~~-~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  381 (386)
T 2dr1_A          320 TPPG-----IKGDEVYEAMRK-RGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKK  381 (386)
T ss_dssp             CCTT-----CCHHHHHHHHHH-TTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCC-----CCHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence            8632     146677777655 5999999987666789999998  6999999999999999987643

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=7.5e-35  Score=276.48  Aligned_cols=332  Identities=14%  Similarity=0.097  Sum_probs=245.4

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      +.|+.+...     +.++.+.+++.+.+......       .|.+..+..++++.+++++      ++++++|++|+|++
T Consensus         3 ~yld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t   71 (384)
T 1eg5_A            3 VYFDNNATT-----RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT   71 (384)
T ss_dssp             EECBTTTCC-----CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred             EEEecCccC-----CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence            566666533     67899999999998752100       0222345688999999998      35678999999999


Q ss_pred             HHHHHHHHHhc----CCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631          120 QAIQVILTVLA----RPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       120 ~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      +++..+++++.    ++||+|++++|+|+++...+   ...|.+++.++.++  ++.+|++++++.++++++++++++|+
T Consensus        72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~  149 (384)
T 1eg5_A           72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN  149 (384)
T ss_dssp             HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred             HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence            99999999987    79999999999999886655   67899999888753  45689999999998889999999999


Q ss_pred             CCcccccCHHHHHHHHHHHHhcC--cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLG--IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~--~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      ||||.+++   +++|.++|+++|  +++|+|++|+.    +.....+..+   +..+++.|+||+++.+|  +||+++++
T Consensus       150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~----~~~~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~  217 (384)
T 1eg5_A          150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI----GKIPFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRK  217 (384)
T ss_dssp             TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT----TTSCCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred             CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc----CCcccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcC
Confidence            99999988   688889999999  99999999983    2112222222   34588899999988878  79999974


Q ss_pred             CCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-C
Q 014631          271 PSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-E  345 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-~  345 (421)
                      ...      +...+...    ....++++.+.+.++..+++. ...++++..++++++++++.+.|++ +++.+. .+ .
T Consensus       218 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~-~~~~  288 (384)
T 1eg5_A          218 GVP------IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI-AVEELSEAAKHMEKLRSKLVSGLMN-LGAHII-TPLE  288 (384)
T ss_dssp             TSC------CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHHHHHHHHHT-TTCEEC-SCTT
T ss_pred             CCc------cccccccCcccccccCCCCChHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEe-CCcc
Confidence            210      01111110    112346788888888888874 2356788899999999999999998 587743 33 2


Q ss_pred             c--eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHH
Q 014631          346 G--SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSA  402 (421)
Q Consensus       346 ~--~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~  402 (421)
                      +  +.+.++.++.      .+..++...| .++||.+.+|..|+.                   .+++|++++  +++++
T Consensus       289 ~~~~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~  361 (384)
T 1eg5_A          289 ISLPNTLSVSFPN------IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEE  361 (384)
T ss_dssp             SBCTTEEEEECTT------CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHH
T ss_pred             cCCCCEEEEEeCC------CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHH
Confidence            2  2356666652      1456666655 678999999886642                   368999998  79999


Q ss_pred             HHHHHHHHHHHHHHhhh
Q 014631          403 LEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       403 l~~~~~~l~~~~~~~~~  419 (421)
                      +++++++|+++++++++
T Consensus       362 i~~~~~~l~~~~~~~~~  378 (384)
T 1eg5_A          362 VDYFLKKIEEILSFLDL  378 (384)
T ss_dssp             HHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999987643

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=1e-34  Score=277.07  Aligned_cols=335  Identities=13%  Similarity=0.122  Sum_probs=248.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC----C--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF----D--CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~----~--~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      +.+++||+.|+|.   +++.++.+.+++.+.+.+...    .  .|+...+..++++.++++++      . ++.++++ 
T Consensus        42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~~i~~~-  110 (399)
T 3tqx_A           42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DDTILYS-  110 (399)
T ss_dssp             TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SEEEEES-
T ss_pred             CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-CcEEEEC-
Confidence            4568999999542   235689999999988875211    1  12233346889999999883      2 3455555 


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~  190 (421)
                      +|++++..++.+++++||.|+++.|+|.++...++..|.+++.++.       .|++++++.+++      +++++++++
T Consensus       111 sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~  183 (399)
T 3tqx_A          111 SCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG  183 (399)
T ss_dssp             CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred             chHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence            5578999999999999999999999999999999999999988875       366788877755      788999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      |+||||.+++   +++|.++|++||+++|+||+|+...++..........+. .+..++++|+||+|+  |.+.||++++
T Consensus       184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~  258 (399)
T 3tqx_A          184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH  258 (399)
T ss_dssp             EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred             CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence            9999999988   889999999999999999999743332222111222221 234588999999987  4455999986


Q ss_pred             CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                              +++++.+.....   ..++.++..+.++.++++.. ..+.++.+++++++++++.+.|+++ |+. +. +..
T Consensus       259 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~~  326 (399)
T 3tqx_A          259 --------KEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL-KTEGPQLRKQLQENSRYFRAGMEKL-GFQ-LV-PGN  326 (399)
T ss_dssp             --------HHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHHH-TCC-BC-CCS
T ss_pred             --------HHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHc-CCC-cC-CCC
Confidence                    356666665421   23467777777777777642 2567888999999999999999987 777 43 445


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +.++|+.++...     +..++...++ ++||.+.|+..+..   .+++|++++  ++++++++++++|+++++++.
T Consensus       327 ~~~~~~~~~~~~-----~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  397 (399)
T 3tqx_A          327 HPIIPVMLGDAQ-----LATNMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG  397 (399)
T ss_dssp             SSEEEEEEECHH-----HHHHHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEeCCHH-----HHHHHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence            667888876421     2456666664 57999998765532   368999997  799999999999999998753

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=100.00  E-value=2.1e-35  Score=280.90  Aligned_cols=330  Identities=13%  Similarity=0.104  Sum_probs=246.8

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC---CC---CCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE---FD---CYSP-SVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~---~y~~-~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      +++++|+.+.+.     +.|+.+.+++.+.+....   ..   .|+. ..+..++++.+++++      ++++++|++|+
T Consensus        15 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~   83 (390)
T 1elu_A           15 ANKTYFNFGGQG-----ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD   83 (390)
T ss_dssp             TTSEECCTTTCC-----CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred             CCeEEecCCccC-----CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence            457899888633     567889999998876521   11   2432 256789999999997      35678999999


Q ss_pred             CHHHHHHHHHHHh-cCCCCeEEEcCCCCcchHHH----HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631          117 GCKQAIQVILTVL-ARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       117 g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      |+++++..+++++ .++||+|+++.|+|+++...    ++..|.+++.++.++++++.+|++++++.++++++++++++|
T Consensus        84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~  163 (390)
T 1elu_A           84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL  163 (390)
T ss_dssp             SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred             ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence            9999999999999 79999999999999987643    566799999998764356778999999999888999999999


Q ss_pred             CCCcccccCHHHHHHHHHHHH----hcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          192 GNPCGNVFTYQQLQKIAEKAR----KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +||||.+++   +++|.++|+    ++|+++|+|++|+..    .....+.   ..+..+++.|+||+ ..+|.++||++
T Consensus       164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g----~~~~~~~---~~~~d~~~~s~~K~-~~~~~g~G~~~  232 (390)
T 1elu_A          164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAG----SLPLDFS---RLEVDYYAFTGHKW-FAGPAGVGGLY  232 (390)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBT----TBCCCTT---TSCCSEEEEESSST-TCCCTTCEEEE
T ss_pred             ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccC----CcCCChh---hcCCCEEEcccccc-ccCCCceEEEE
Confidence            999999988   888899999    999999999999852    2112222   22344888999995 35566799999


Q ss_pred             eeCCCcchhHHHHHHHHhhh-----------------------cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHH
Q 014631          268 TSDPSGILQELRIVDSIKGY-----------------------LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRD  323 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~  323 (421)
                      +++        ++++.+...                       ....++++...+.++.++++... ..++++..+++++
T Consensus       233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~  304 (390)
T 1elu_A          233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQ  304 (390)
T ss_dssp             ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            964        233333321                       11124566677777766665422 2347888999999


Q ss_pred             HHHHHHHHhhcCCCccccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631          324 TADICYDRIKEIPCITCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE  399 (421)
Q Consensus       324 ~~~~~~~~l~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~  399 (421)
                      +++++.+.|++++++.+. .|  ..+.++++.++..     .+..++...| .++||.+.+|.   .++++|++++  .+
T Consensus       305 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~---~~~~iRis~~~~~~  374 (390)
T 1elu_A          305 RSEFLWRGLNQLPHVHCL-ATSAPQAGLVSFTVDSP-----LGHRAIVQKL-EEQRIYLRTIA---DPDCIRACCHYITD  374 (390)
T ss_dssp             HHHHHHHHHHHSTTEEES-CSSCCSSSEEEEEECSS-----SCHHHHHHHH-HHTTEECEEET---TTTEEEEECCTTCC
T ss_pred             HHHHHHHHHHhcCCcEEe-cCccccccEEEEEcCCC-----CCHHHHHHHH-HHCCEEEEecC---CCCeEEEecccCCC
Confidence            999999999998888733 32  2344555577521     1456677766 67799999986   3579999986  89


Q ss_pred             HHHHHHHHHHHHHH
Q 014631          400 PSALEEGLGRIKAF  413 (421)
Q Consensus       400 ~e~l~~~~~~l~~~  413 (421)
                      ++++++++++|+++
T Consensus       375 ~~~i~~~~~~l~~~  388 (390)
T 1elu_A          375 EEEINHLLARLADF  388 (390)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998653

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=1.3e-34  Score=274.99  Aligned_cols=327  Identities=13%  Similarity=0.083  Sum_probs=245.4

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-CC---CCCC--CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-AE---FDCY--SPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      +..++||+.|.+   +++++++.+.+++.+.+.. +.   ...|  +...+..++|++++++++      + + +.++++
T Consensus        38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~-~-~~i~~~  106 (384)
T 1bs0_A           38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------Y-S-RALLFI  106 (384)
T ss_dssp             TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------C-S-EEEEES
T ss_pred             CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C-cEEEeC
Confidence            567899998863   2345788999999998875 21   1123  445667899999999983      3 2 455555


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC---ceEEEEeCCCC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN---TVAMVIVNPGN  193 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~---~~~i~~~~p~n  193 (421)
                      +|++++..+++++.++||.|+++.|+|..+...+...|.+++.+|.       .|++++++.+++.   ++++++++|+|
T Consensus       107 sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n  179 (384)
T 1bs0_A          107 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS  179 (384)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             CcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            5589999999999999999999999999999999999999888873       4788998887653   67788889999


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      |||.+++   +++|.++|++||+++|+||+|+.+.++  +....  ..++.. ..++++|+||+++.+|   ||++++  
T Consensus       180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~-~di~~~s~sK~~~~~G---G~~~~~--  248 (384)
T 1bs0_A          180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSC--WLQKVK-PELLVVTFGKGFGVSG---AAVLCS--  248 (384)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHH--HHTTCC-CSEEEEESSSTTSSCC---EEEEEC--
T ss_pred             CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchH--HhcCCC-CcEEEeeccchhhccC---cEEEeC--
Confidence            9999987   788999999999999999999876542  22211  222221 2388999999998766   999985  


Q ss_pred             CcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631          272 SGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM  348 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  348 (421)
                            +++++.+....   ..+.+++++.+.++.++++...+.+.++..++++++++++.+.|+++ ++. + .+..+.
T Consensus       249 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~  319 (384)
T 1bs0_A          249 ------STVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSA  319 (384)
T ss_dssp             ------HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSS
T ss_pred             ------HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCCC
Confidence                  35666665542   12235788888888877764222256788899999999999999987 777 4 245567


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      ++|+.++...     +..++...+ .++||.+.+|..|+.   .+++|++++  ++++++++++++|+++
T Consensus       320 ~~~~~~~~~~-----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          320 IQPLIVGDNS-----RALQLAEKL-RQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             BCCEEEESHH-----HHHHHHHHH-HHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCHH-----HHHHHHHHH-HHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            7788775321     245666665 456999999987753   368999998  4899999999999864

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=100.00  E-value=1.5e-34  Score=275.30  Aligned_cols=332  Identities=12%  Similarity=0.033  Sum_probs=244.4

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV  124 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~  124 (421)
                      +.+.|+.+.|.     +.++.+.+++.+.+...  ..+....++.++|+.++++++      +++++|++|+|+++++..
T Consensus         8 ~~~yl~~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g------~~~~~v~~t~g~t~a~~~   74 (392)
T 2z9v_A            8 DPVITLTAGPV-----NAYPEVLRGLGRTVLYD--YDPAFQLLYEKVVDKAQKAMR------LSNKPVILHGEPVLGLEA   74 (392)
T ss_dssp             CCSEECSSSCC-----CCCHHHHHHTTSCCCCT--TSHHHHHHHHHHHHHHHHHTT------CSSCCEEESSCTHHHHHH
T ss_pred             CcceeecCCCc-----CCCHHHHHHHhcccccc--ccHHHHHHHHHHHHHHHHHhC------CCCCEEEEeCCchHHHHH
Confidence            44667666544     67788988887765431  111222345788888888873      457899999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhh--ccCceEEEEeCCCCCcccccC
Q 014631          125 ILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALA--DENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       125 ~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~--~~~~~~i~~~~p~nptG~~~~  200 (421)
                      +++++.++||+|++++|+|+++  ...++..|.+++.++.+.+  +.+|++++++.+  .++++++++++|+||||.+++
T Consensus        75 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~  152 (392)
T 2z9v_A           75 AAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP  152 (392)
T ss_dssp             HHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC
T ss_pred             HHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc
Confidence            9999999999999999999875  3444567999999987543  458999999988  357889999999999999987


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                         +++|.++|++||+++|+|++|+..    .....+..++   ..+++.|+||+++ .+|  +||++++        ++
T Consensus       153 ---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~---~d~~~~s~sK~~~~~~g--~G~l~~~--------~~  212 (392)
T 2z9v_A          153 ---IDAIGALVSAHGAYLIVDAVSSFG----GMKTHPEDCK---ADIYVTGPNKCLGAPPG--LTMMGVS--------ER  212 (392)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTTBT----TBSCCGGGGT---CSEEEECSSSTTCCCSC--CEEEEEC--------HH
T ss_pred             ---HHHHHHHHHHcCCeEEEEcccccC----Cccccccccc---ceEEEecCcccccCCCc--eeEEEEC--------HH
Confidence               779999999999999999999852    2222233332   3478899999643 455  5999985        34


Q ss_pred             HHHHHhhh---------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631          280 IVDSIKGY---------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI  338 (421)
Q Consensus       280 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  338 (421)
                      +++.+...                     ....++++...+.++.++++......+++..++++++++++.+.|+++ ++
T Consensus       213 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~  291 (392)
T 2z9v_A          213 AWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GL  291 (392)
T ss_dssp             HHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             HHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence            55655421                     111235566666666666654222337788899999999999999987 87


Q ss_pred             cccCCCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHH
Q 014631          339 TCPRKPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIK  411 (421)
Q Consensus       339 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~  411 (421)
                      .+. .|.    .+.++++.++..     .+..++...|.+++||.+.+|..+...+++|+++ +  ++++++++++++|+
T Consensus       292 ~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~  365 (392)
T 2z9v_A          292 SVW-AASDSIASPTTTAVRTPDG-----VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALG  365 (392)
T ss_dssp             CBS-SSSGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred             eec-cCCccccCCceEEEECCCC-----CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHH
Confidence            733 423    356778877531     1466777776555599999998766678999995 4  79999999999999


Q ss_pred             HHHHHhh
Q 014631          412 AFCQRHA  418 (421)
Q Consensus       412 ~~~~~~~  418 (421)
                      ++++++.
T Consensus       366 ~~~~~~~  372 (392)
T 2z9v_A          366 GAMNAAG  372 (392)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHcC
Confidence            9998764

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=100.00  E-value=1.3e-34  Score=275.71  Aligned_cols=332  Identities=13%  Similarity=0.062  Sum_probs=248.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS--PSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCK  119 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~  119 (421)
                      +...++++.|.      ++.++.+.+++.+.+..    .|.  +..+..++++.++++++      .+++ +|++|+|++
T Consensus        17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~t   80 (393)
T 2huf_A           17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLFQ------TNNIATFCLSASGH   80 (393)
T ss_dssp             CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESSCHH
T ss_pred             CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEcCcHH
Confidence            45667776663      36778888888765543    232  22456788888888873      4554 899999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcc
Q 014631          120 QAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCG  196 (421)
Q Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG  196 (421)
                      +++..++.++.++||+|++++|+|+++  ...++..|.+++.++.++  ++.+|++++++.+++ ++++|++++|+||||
T Consensus        81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG  158 (393)
T 2huf_A           81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG  158 (393)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred             HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence            999999999999999999999999884  334566899999998754  346899999999887 889999999999999


Q ss_pred             cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc-CCCCceEEEEEeeCCCcch
Q 014631          197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGIL  275 (421)
Q Consensus       197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~  275 (421)
                      .+++   +++|.++|++||+++|+|++|+..    .....+..   .+..+++.|+||++ +++|+  ||++++      
T Consensus       159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~----~~~~~~~~---~~~d~~~~s~sK~l~g~~G~--G~~~~~------  220 (393)
T 2huf_A          159 VLQG---LEGVGALCHQHNCLLIVDTVASLG----GAPMFMDR---WEIDAMYTGSQKVLGAPPGI--TPVSFS------  220 (393)
T ss_dssp             EECC---CTTHHHHHHHTTCEEEEECTTTBT----TBCCCTTT---TTCSEEECCSSSTTCCCSSC--EEEEEC------
T ss_pred             ccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCcchhh---cCccEEEECCCcccccCCCe--EEEEEC------
Confidence            9987   789999999999999999998752    21222222   23458889999974 45775  999985      


Q ss_pred             hHHHHHHHHhhhc------------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631          276 QELRIVDSIKGYL------------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       276 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  331 (421)
                        +++++.+....                        ...++++...+.++.++++...+.++++..++++++++++.+.
T Consensus       221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~  298 (393)
T 2huf_A          221 --HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRG  298 (393)
T ss_dssp             --HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence              35666665431                        0113556667776666776432335778888999999999999


Q ss_pred             hhcCCCccccCCCC---ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHH
Q 014631          332 IKEIPCITCPRKPE---GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEE  405 (421)
Q Consensus       332 l~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~  405 (421)
                      |+++ |+.+. .|.   .+.++++.++..     .+..++...|++++||.+.+|..+...+++|+++ +  .+++++++
T Consensus       299 L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~  371 (393)
T 2huf_A          299 LQDA-GFELY-ADPKDRLSTVTTIKVPQG-----VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDR  371 (393)
T ss_dssp             HHHT-TCCBS-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHH
T ss_pred             HHHc-CCeec-cCccccCCcEEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHH
Confidence            9988 87733 443   244777777521     1466777777666799999998776678999999 6  36889999


Q ss_pred             HHHHHHHHHHHhhh
Q 014631          406 GLGRIKAFCQRHAK  419 (421)
Q Consensus       406 ~~~~l~~~~~~~~~  419 (421)
                      ++++|++++++++.
T Consensus       372 ~~~~l~~~~~~~~~  385 (393)
T 2huf_A          372 VLQVFQEAVAAVKP  385 (393)
T ss_dssp             HHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999987754

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=4.6e-34  Score=274.84  Aligned_cols=336  Identities=16%  Similarity=0.126  Sum_probs=248.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-CC-CCCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-AE-FDCYSPSVG----ILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~y~~~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      |.++|||+.|++   .+++.++.+.+++.+++.. +. ...|....|    ..++++.++++++      .  ++.++++
T Consensus        63 g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~  131 (427)
T 2w8t_A           63 GKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFS  131 (427)
T ss_dssp             TEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEES
T ss_pred             CceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEec
Confidence            566889999963   2345789999999998876 21 122322333    4788888888873      2  2556666


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCCC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNPG  192 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p~  192 (421)
                      +|++++..+++++.++||.|+++.|+|.++...++..|.+++.++.       .|++++++.+.+    ++++|++++++
T Consensus       132 sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~  204 (427)
T 2w8t_A          132 TGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVY  204 (427)
T ss_dssp             CHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEE
T ss_pred             CcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCC
Confidence            6777999999999999999999999999999999999999888763       488999988865    67889999999


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      ||||.+++   +++|.++|++||+++|+||+|+.+.++.........++. .+.++++.||||+++++|   ||+++++ 
T Consensus       205 n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~-  277 (427)
T 2w8t_A          205 SMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH-  277 (427)
T ss_dssp             TTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC-
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH-
Confidence            99999987   889999999999999999999997765322211111221 234688999999998766   9999863 


Q ss_pred             CcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631          272 SGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM  348 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  348 (421)
                             ++++.+....   ..+++.++..+.++.++++...  ..++.+++++++++++.+.|+++ |+.+...+..+.
T Consensus       278 -------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~  347 (427)
T 2w8t_A          278 -------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSA  347 (427)
T ss_dssp             -------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSS
T ss_pred             -------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCC
Confidence                   2444444431   1234567777777767776421  24677888999999999999987 777321332567


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++|+.++...     ...++...| .++||.+.++..|+.   .+++|++++  ++++++++++++|+++++++.+
T Consensus       348 ~~~~~~~~~~-----~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~  417 (427)
T 2w8t_A          348 IVAVMLEDQE-----QAAMMWQAL-LDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGV  417 (427)
T ss_dssp             EEEEEESSHH-----HHHHHHHHH-HHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEECCHH-----HHHHHHHHH-HHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence            8888886321     245666666 456999999987754   358999998  5999999999999999987654

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=100.00  E-value=1.4e-34  Score=276.35  Aligned_cols=335  Identities=17%  Similarity=0.127  Sum_probs=243.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE------FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      |.++++|..++.   .+++.+|.+.+++.+.+....      ...|+...+..++|++++++++      . +++|++++
T Consensus        45 g~~~i~~~~~~~---~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~s  114 (401)
T 2bwn_A           45 KQDITVWCGNDY---LGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSS  114 (401)
T ss_dssp             EEEEEECSCSCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESC
T ss_pred             CCcEEEeeCCCc---ccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECC
Confidence            355678876652   123456789999999887521      1235555678899999999983      2 57888877


Q ss_pred             CHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeC
Q 014631          117 GCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~  190 (421)
                      |++ ++..++..+.  ++||.|+++.|+|+++...++..|++++.++.+       |++++++.+.    ++++++++++
T Consensus       115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~  186 (401)
T 2bwn_A          115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  186 (401)
T ss_dssp             HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence            766 7776666653  589999999999999999999999999888753       6778887765    5788999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      |+||||.+++   +++|.++|++||+++|+||+|+.+.++..+...+...+. ....++++||||.|+++|   ||++++
T Consensus       187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~  260 (401)
T 2bwn_A          187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  260 (401)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence            9999999987   789999999999999999999965443222111111221 123588899999998888   999885


Q ss_pred             CCCcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          270 DPSGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                              +++.+.+....   ....+.+++.+.++.++++.....++++.+++++++++++.+.|+++ |+. +..+.+
T Consensus       261 --------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~  330 (401)
T 2bwn_A          261 --------ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-IIDHGS  330 (401)
T ss_dssp             --------HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BCCCSS
T ss_pred             --------HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCC
Confidence                    34556554322   12223445777777777765333446788889999999999999987 777 435554


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      + ++|+.++...     +..++...|++++||.+.|+..|+.+   +++|++++  ++++++++++++|+++++++
T Consensus       331 ~-~~~~~~~~~~-----~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~  400 (401)
T 2bwn_A          331 H-IVPVVIGDPV-----HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC  400 (401)
T ss_dssp             S-CEEEECCCHH-----HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred             C-eEEEEeCChH-----HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence            4 7888886311     24566666656789999998877543   58999998  68999999999999987653

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=100.00  E-value=2.7e-34  Score=276.30  Aligned_cols=334  Identities=16%  Similarity=0.165  Sum_probs=244.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC----------CCCCHHHHHHHHHHHhhhCCCCCCCCc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP----------SVGILPARRAIADYLNSELPCKLSPDD  111 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~l~~~ia~~l~~~~~~~~~~~~  111 (421)
                      .+.+.++|+.+.+.     +.++.+.+++.+.+.......++.          .....++++.+++++      ++++++
T Consensus        19 ~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~   87 (423)
T 3lvm_A           19 AMKLPIYLDYSATT-----PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPRE   87 (423)
T ss_dssp             -CCSSEECBTTTCC-----CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGGG
T ss_pred             ccCCCEeecCCCcC-----CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCCCCe
Confidence            47888999988754     678999999988776111111111          122367788888877      356789


Q ss_pred             EEEcCCHHHHHHHHHHHhcC----CCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCce
Q 014631          112 VYLTAGCKQAIQVILTVLAR----PGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV  184 (421)
Q Consensus       112 i~~~~g~~~al~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~  184 (421)
                      |++|+|+++|+.++++++.+    +||+|+++.++|+++...+   ...|++++.++.++  ++.+|++++++.+.++++
T Consensus        88 v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~  165 (423)
T 3lvm_A           88 IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTI  165 (423)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEE
T ss_pred             EEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCCcE
Confidence            99999999999999998874    7999999999999987776   44599999998754  456899999999988899


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631          185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG  264 (421)
Q Consensus       185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  264 (421)
                      ++++++|+||||.+++   +++|.++|++||+++|+|++|+...    ....+..+   +..+++.|+||.++.+|  +|
T Consensus       166 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~~~---~~di~~~s~sK~~g~~g--~G  233 (423)
T 3lvm_A          166 LVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLSQL---KVDLMSFSGHKIYGPKG--IG  233 (423)
T ss_dssp             EEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCTTTS---CCSEEEEESTTTTSCSS--CE
T ss_pred             EEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCC----CCcChhhc---CCCEEEechHHhcCCCC--eE
Confidence            9999999999999988   7889999999999999999987632    11222222   23488899999877666  89


Q ss_pred             EEEeeCCCcchhHHHHHHHHhhhc--------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          265 WLVTSDPSGILQELRIVDSIKGYL--------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      ++++++..        .+.+....        ....+++...+.++..+++. ...++++..++++++++++.+.|+++|
T Consensus       234 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~  304 (423)
T 3lvm_A          234 ALYVRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI-AKEEMATEMERLRGLRNRLWNGIKDIE  304 (423)
T ss_dssp             EEEECBTT--------BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             EEEEeccc--------cCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99986421        12222221        12345667777777666653 234478889999999999999999988


Q ss_pred             CccccCCCCc---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEE
Q 014631          337 CITCPRKPEG---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRI  394 (421)
Q Consensus       337 g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi  394 (421)
                      ++.+. .+.+   +.++++.++.      .+..++...+ .+  |.+.+|..|..                   .+++|+
T Consensus       305 ~~~~~-~~~~~~~~~~~~~~~~~------~~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi  374 (423)
T 3lvm_A          305 EVYLN-GDLEHGAPNILNVSFNY------VEGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRF  374 (423)
T ss_dssp             TEEEE-SCSTTBCTTEEEEEETT------SCHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEE
T ss_pred             CEEEe-CCccccCCCeEEEEeCC------CCHHHHHHHH-hh--heeccCccccCCCccccHHHHHhCCCccccCceEEE
Confidence            88744 3332   2344555532      1455565544 54  88999877544                   378999


Q ss_pred             Eec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          395 TFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       395 ~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +++  .+++++++++++|+++++++++
T Consensus       375 ~~~~~~t~e~i~~~~~~l~~~~~~~~~  401 (423)
T 3lvm_A          375 SLGRFTTEEEIDYTIELVRKSIGRLRD  401 (423)
T ss_dssp             ECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence            998  6889999999999999988765

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=3.4e-34  Score=273.67  Aligned_cols=333  Identities=14%  Similarity=0.124  Sum_probs=250.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-CCC---CCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-AEF---DCYS--PSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .+..++||+.|.|-   +++.++.+.+++.+.+.. +..   ..|.  ...+..+++++++++++      .+ +.|++ 
T Consensus        43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~~i~~-  111 (401)
T 1fc4_A           43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG------ME-DAILY-  111 (401)
T ss_dssp             TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT------CS-EEEEE-
T ss_pred             CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC------CC-cEEEe-
Confidence            46789999998642   123689999999998875 211   1221  24557899999999983      33 45555 


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEe
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIV  189 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~  189 (421)
                      ++|++++..++++++++||.|+++.|+|.++...+...|.+++.++.       .|++++++.+++      ++++++++
T Consensus       112 ~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~  184 (401)
T 1fc4_A          112 SSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             CChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence            55577999999999999999999999998888888889999888762       478888887764      68899999


Q ss_pred             CCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc-cccc-CCCCcccccccCCCCCEEEEccccccc-CCCCceEEEE
Q 014631          190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD-HLTF-GSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWL  266 (421)
Q Consensus       190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~  266 (421)
                      +|+||||.+++   +++|.++|+++|+++|+||+|+ ++.. .+........+.. +..++++|+||+| +++|   ||+
T Consensus       185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~  257 (401)
T 1fc4_A          185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT  257 (401)
T ss_dssp             SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred             CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence            99999999988   8999999999999999999996 6642 3433222222222 3458899999998 5554   999


Q ss_pred             EeeCCCcchhHHHHHHHHhhhc--c-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Q 014631          267 VTSDPSGILQELRIVDSIKGYL--N-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK  343 (421)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~  343 (421)
                      +++        +++++.+....  . ...+++++.+.++.++++...  ..++..++++++++++.+.|+++ ++. +. 
T Consensus       258 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-  324 (401)
T 1fc4_A          258 AAR--------KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVE--AGSELRDRLWANARQFREQMSAA-GFT-LA-  324 (401)
T ss_dssp             EEC--------HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHT-TCC-BC-
T ss_pred             EcC--------HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCc-cc-
Confidence            985        35666665543  1 234778888888888886421  14677888999999999999988 777 43 


Q ss_pred             CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      |..++++|+.++...     +..++...+ .++||.+.+|..|+.   .+++|++++  ++++++++++++|+++++++.
T Consensus       325 ~~~~~~~~~~~~~~~-----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  398 (401)
T 1fc4_A          325 GADHAIIPVMLGDAV-----VAQKFAREL-QKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG  398 (401)
T ss_dssp             CSSSSEEEEEEECHH-----HHHHHHHHH-HHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEEcCChH-----HHHHHHHHH-HHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            567788898886321     245566655 556999999987754   357999998  799999999999999998764

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=100.00  E-value=1.5e-35  Score=280.00  Aligned_cols=328  Identities=12%  Similarity=0.104  Sum_probs=241.1

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHH-HHHHHhhhCCCCCCCCcEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYSPSVGILPARRA-IADYLNSELPCKLSPDDVY  113 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~-ia~~l~~~~~~~~~~~~i~  113 (421)
                      ++.+++|+.|.+.    .++++.+.+++.+.+....        ...|.+..+..++++. ++++++      .+  +|+
T Consensus         6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~   73 (371)
T 2e7j_A            6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR   73 (371)
T ss_dssp             --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred             CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence            5678889886533    3678999999998876531        1234566788999999 999984      33  999


Q ss_pred             EcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-----cCceEEEE
Q 014631          114 LTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-----ENTVAMVI  188 (421)
Q Consensus       114 ~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-----~~~~~i~~  188 (421)
                      +|+|+++++..++++++++||+|++++|+|+++...+...|++++.++...+.++.+|++++++.++     ++++++++
T Consensus        74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~  153 (371)
T 2e7j_A           74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALI  153 (371)
T ss_dssp             EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEE
Confidence            9999999999999999999999999999999999999999999999982122346799999999887     67899999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      ++|+||||.+++   +++|.++|++||+++|+|++|+.+...    .++..++.   .++++|+||+++.+ .|+||+++
T Consensus       154 ~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~~---di~~~s~sK~~~~~-~~~G~~~~  222 (371)
T 2e7j_A          154 TYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIGA---DFIVGSGHKSMAAS-GPIGVMGM  222 (371)
T ss_dssp             ESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHTC---SEEEEEHHHHSSCC-SSCEEEEE
T ss_pred             ECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcCC---CEEEecCCcCCCCC-CCcEEEEE
Confidence            999999999987   588899999999999999999985421    22333332   38899999987655 49999999


Q ss_pred             eCCCcchhHHHHHHH-Hhhhcc---c-----ccCCchHHHHHHHHHhhccchhHHHHHHHHH--HHHHHHHHHHhhcCCC
Q 014631          269 SDPSGILQELRIVDS-IKGYLN---I-----SSGPATFVQGAVPQIFKNTKEDFFSKIVDIL--RDTADICYDRIKEIPC  337 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~-~~~~~~---~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~g  337 (421)
                      ++.        +++. +.....   .     .++++...+.++..+++....    +..+++  +++++++.+.|+++ +
T Consensus       223 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~  289 (371)
T 2e7j_A          223 KEE--------WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-G  289 (371)
T ss_dssp             CTT--------TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-T
T ss_pred             ech--------hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-C
Confidence            742        3333 333221   1     335566666666666653111    556677  88889999999887 8


Q ss_pred             ccccCCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC------CCeEE-EEec---CCHHHHHH
Q 014631          338 ITCPRKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM------KNWLR-ITFA---IEPSALEE  405 (421)
Q Consensus       338 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~iR-i~~~---~~~e~l~~  405 (421)
                      +.+. .|.  .+.++|+.++        +..++...+ .++||.+.| ..+..      ++++| ++++   ++++++++
T Consensus       290 ~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~  358 (371)
T 2e7j_A          290 IKQL-GDNPHNHDLMFFHAE--------VLYEISKKA-KGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDY  358 (371)
T ss_dssp             CEEE-SSSSCCSSEEEEECH--------HHHHHHHHS-SSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHH
T ss_pred             cEEe-cCCCccCceEEEECC--------CHHHHHHHH-HHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHH
Confidence            7733 443  3568888875        145566655 578999988 33322      57899 9998   58999999


Q ss_pred             HHHHHHHHHHHh
Q 014631          406 GLGRIKAFCQRH  417 (421)
Q Consensus       406 ~~~~l~~~~~~~  417 (421)
                      ++++|+++++++
T Consensus       359 ~~~~l~~~~~~~  370 (371)
T 2e7j_A          359 VLNAFKEIIEKY  370 (371)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhc
Confidence            999999998764

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=100.00  E-value=4.5e-34  Score=272.38  Aligned_cols=321  Identities=11%  Similarity=0.086  Sum_probs=242.2

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      +.++.+.+++.+.+..    .|.+.  ....++|++++++++      .+++ +|++|+|+++++..++.+++++||+|+
T Consensus        28 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl   97 (396)
T 2ch1_A           28 NCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEEGDRVL   97 (396)
T ss_dssp             CCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhcCCCCeEE
Confidence            5678888877654422    34332  236789999999983      5666 899999999999999999999999999


Q ss_pred             EcCCCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          138 LPKPGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       138 ~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      +++|+|+++.  ..++..|++++.++.+.  ++.+|++++++.+++ ++++|++++|+||||.+++   +++|.++|+++
T Consensus        98 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~  172 (396)
T 2ch1_A           98 IAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQH  172 (396)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred             EEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHHc
Confidence            9999999884  47788899999998753  456899999999877 7899999999999999988   78899999999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------  287 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------  287 (421)
                      |+++|+|++|+..    .....+..++   ..+++.|++|.++. +.++|++++++        ++++.+...       
T Consensus       173 ~~~li~Dea~~~g----~~~~~~~~~~---~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~~  236 (396)
T 2ch1_A          173 DCLLIVDAVASLC----GVPFYMDKWE---IDAVYTGAQKVLGA-PPGITPISISP--------KALDVIRNRRTKSKVF  236 (396)
T ss_dssp             TCEEEEECTTTBT----TBCCCTTTTT---CCEEECCCC-CCCC-CSSCEEEEECH--------HHHHHHHTCSSCCSCG
T ss_pred             CCEEEEEcccccc----CCccchhhcC---cCEEEEcCCccccC-CCCeEEEEECH--------HHHHhhhhccCcccce
Confidence            9999999999842    2222222222   23667899997543 34569998852        455554321       


Q ss_pred             -----------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce---
Q 014631          288 -----------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS---  347 (421)
Q Consensus       288 -----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~---  347 (421)
                                       ....++++...+.++.++++...+.++++..++++++++++.+.|+++ |+. +..+.++   
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~  314 (396)
T 2ch1_A          237 YWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLD-IFVKDPRHRL  314 (396)
T ss_dssp             GGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCC-BSSCSGGGBC
T ss_pred             EechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCe-eccCCccccC
Confidence                             112245677788888888865334567888999999999999999987 877 4355442   


Q ss_pred             -eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          348 -MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       348 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       .++++.++..     .+..++...|++++||.+.+|..+..++++|+++ +  .+++++++++++|+++++++..
T Consensus       315 ~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~  385 (396)
T 2ch1_A          315 PTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP  385 (396)
T ss_dssp             TTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred             CceEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence             3677777531     2466777777666799999987666678999999 4  4889999999999999987653

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=100.00  E-value=9e-34  Score=268.87  Aligned_cols=332  Identities=15%  Similarity=0.094  Sum_probs=243.9

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CC-CCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FD-CYSP----SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~-~y~~----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      +.|+.+.+.     +.++.+++++.+.+....  .+ .|..    ...+.++++.+++++      +.++++|++|+|++
T Consensus         2 ~yld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t   70 (382)
T 4eb5_A            2 AYFDYTSAK-----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGAT   70 (382)
T ss_dssp             CBCBTTTCC-----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHH
T ss_pred             eeeccCCCC-----CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchH
Confidence            345555533     678999999999987521  11 1321    134577888888887      35678999999999


Q ss_pred             HHHHHHHHHhc----CCCCeEEEcCCCCcchHHHHh---hcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631          120 QAIQVILTVLA----RPGANILLPKPGFPLYEANAR---HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       120 ~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      +++.+++.++.    ++||+|++++|+|+++...+.   ..|++++.++++.  ++.+|++++++.++++++++++++|+
T Consensus        71 ~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~  148 (382)
T 4eb5_A           71 EANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHAN  148 (382)
T ss_dssp             HHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBC
T ss_pred             HHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccC
Confidence            99999999987    899999999999998866664   3689999998753  45689999999998888999999999


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      ||||.+++   +++|.++|++||++ |+|++|+.    |.....+..++   ..+++.|+||.++.+|  +|++++++..
T Consensus       149 nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~~~---~di~~~s~sK~~g~~g--~G~~~~~~~~  215 (382)
T 4eb5_A          149 NEIGTIQP---VEEISEVLAGKAAL-HIDATASV----GQIEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEA  215 (382)
T ss_dssp             TTTCBBCC---HHHHHHHHTTSSEE-EEECTTTB----TTBCCCHHHHT---CSEEEEETGGGTCCSS--CEEEEEETTC
T ss_pred             CCccccCC---HHHHHHHHHHCCCE-EEEcchhc----CCcccCccccC---CCEEEeehHHhcCCCc--eEEEEEcccc
Confidence            99999987   67899999999999 99999984    22112222222   3488899999977666  7999987532


Q ss_pred             cchhHHHHHHHHhh----hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc--
Q 014631          273 GILQELRIVDSIKG----YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG--  346 (421)
Q Consensus       273 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~--  346 (421)
                      .      +...+..    .....++++...+.++..+++.. ..++++.+++++++++++.+.|+++|++.+. .+.+  
T Consensus       216 ~------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~  287 (382)
T 4eb5_A          216 K------LQPVILGGGQENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKR  287 (382)
T ss_dssp             C------CCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSB
T ss_pred             c------cCceecCCCccccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCcccC
Confidence            0      1000000    11122456666666666666542 3467888899999999999999998888733 4432  


Q ss_pred             -eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHH
Q 014631          347 -SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALE  404 (421)
Q Consensus       347 -~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~  404 (421)
                       +.++++.++.      .+..++...+ .++||.+.+|..|..                   .+++|++++  +++++++
T Consensus       288 ~~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~  360 (382)
T 4eb5_A          288 LPNNVNVRFSY------IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVD  360 (382)
T ss_dssp             CTTEEEEEETT------SCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHH
T ss_pred             CCCEEEEEeCC------cCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHH
Confidence             4466777652      1456677665 568999999875422                   478999998  6899999


Q ss_pred             HHHHHHHHHHHHhhh
Q 014631          405 EGLGRIKAFCQRHAK  419 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~  419 (421)
                      +++++|+++++++++
T Consensus       361 ~~~~~l~~~~~~~~~  375 (382)
T 4eb5_A          361 RLLEVLPGVIERLRS  375 (382)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988764

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=100.00  E-value=1.1e-33  Score=268.18  Aligned_cols=333  Identities=14%  Similarity=0.080  Sum_probs=237.3

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS---------VGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---------~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      |+|+.+.+.     ++++.+.+++.+.+.+..  .++..         ..+.++++.+++++    |  +++++|++|+|
T Consensus         2 iyld~~~~~-----~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g   68 (382)
T 4hvk_A            2 AYFDYTSAK-----PVDERILEAMLPYMTESF--GNPSSVHSYGFKAREAVQEAREKVAKLV----N--GGGGTVVFTSG   68 (382)
T ss_dssp             CBCBTTTCC-----CCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHHHHHHHHHHHHHHT----T--CTTEEEEEESS
T ss_pred             EeecCCCcC-----CCCHHHHHHHHHHHHhhc--CCCcccchHHHHHHHHHHHHHHHHHHHc----C--CCcCeEEEECC
Confidence            455555433     677899999999987621  12111         11235666666665    3  56788999999


Q ss_pred             HHHHHHHHHHHhc----CCCCeEEEcCCCCcchHHHHhh---cCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631          118 CKQAIQVILTVLA----RPGANILLPKPGFPLYEANARH---TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN  190 (421)
Q Consensus       118 ~~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~  190 (421)
                      +++++..+++++.    ++||+|+++.++|+++...+..   .|++++.++.+.  ++.+|++++++.++++++++++++
T Consensus        69 ~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~  146 (382)
T 4hvk_A           69 ATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQH  146 (382)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCS
T ss_pred             chHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCceEEEEEC
Confidence            9999999999987    8999999999999988765544   699999998753  456899999999988999999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      |+||||.+++   +++|.++|++||+ +|+|++|+...    ....+...+   ..+++.|+||.++.+|  +|++++++
T Consensus       147 ~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~g~~g--~g~~~~~~  213 (382)
T 4hvk_A          147 ANNEIGTIQP---VEEISEVLAGKAA-LHIDATASVGQ----IEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRK  213 (382)
T ss_dssp             BCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHHT---CSEEEEESGGGTSCTT--CEEEEEET
T ss_pred             CCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhcC---CCEEEEeHHHhcCCCc--eEEEEEcC
Confidence            9999999977   7788999999999 99999987522    112222222   2388899999876666  78888764


Q ss_pred             CCcchhHHHHHHHH-hhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc---
Q 014631          271 PSGILQELRIVDSI-KGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG---  346 (421)
Q Consensus       271 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---  346 (421)
                      .....   ...... ........+++...+.++..++.. ...++++..++++++++++.+.|+++|++.+. .+.+   
T Consensus       214 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~  288 (382)
T 4hvk_A          214 EAKLQ---PVILGGGQENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRL  288 (382)
T ss_dssp             TCCCC---CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBC
T ss_pred             ccCcC---cccccCCCcCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccC
Confidence            32110   000000 001111345567777777777653 34677889999999999999999998888733 4432   


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHH
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEE  405 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~  405 (421)
                      +.++++.++.      .+..++...| .++||.+.+|..|..                   .+++|++++  ++++++++
T Consensus       289 ~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~  361 (382)
T 4hvk_A          289 PNNVNVRFSY------IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDR  361 (382)
T ss_dssp             TTEEEEEETT------CCHHHHHHHH-HHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHH
T ss_pred             CCEEEEEECC------CCHHHHHHHH-HHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHH
Confidence            2355555542      1456666554 677999999976643                   478999998  68999999


Q ss_pred             HHHHHHHHHHHhhh
Q 014631          406 GLGRIKAFCQRHAK  419 (421)
Q Consensus       406 ~~~~l~~~~~~~~~  419 (421)
                      ++++|+++++++++
T Consensus       362 ~~~~l~~~~~~~~~  375 (382)
T 4hvk_A          362 LLEVLPGVIERLRS  375 (382)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988764

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=4.1e-34  Score=275.39  Aligned_cols=348  Identities=14%  Similarity=0.113  Sum_probs=240.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .+..++||..|.+....+ .+++.+.+++.+++.....  ..|.+..+..++++++++++.   + . .+++|++|+|++
T Consensus        39 ~g~~~id~~~~~~~~~lg-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~  112 (426)
T 1sff_A           39 EGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS  112 (426)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred             CCCEEEEcccChhhcccC-CCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence            367788998776432223 2678899999999875321  145667778899999999973   2 1 348999999999


Q ss_pred             HHHHHHHH---HhcCCCCeEEEcCCCCcchHH-HHhhcCce-------------eEeeeccC---CCCccCCHHHHHhhh
Q 014631          120 QAIQVILT---VLARPGANILLPKPGFPLYEA-NARHTRLE-------------IRHFDLLP---EKGWEVDLDGLEALA  179 (421)
Q Consensus       120 ~al~~~~~---~l~~~gd~Vl~~~p~y~~~~~-~~~~~g~~-------------~~~~~~~~---~~~~~~d~e~l~~~~  179 (421)
                      +++..+++   .+.++| +|++.+|+|+++.. .....|.+             ++.++.+.   ..++.+|++++++.+
T Consensus       113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l  191 (426)
T 1sff_A          113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF  191 (426)
T ss_dssp             HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence            99999988   667776 89999999987653 44444532             55566532   113457899999887


Q ss_pred             c-----cCceEEEEe-CCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccc
Q 014631          180 D-----ENTVAMVIV-NPGNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM  252 (421)
Q Consensus       180 ~-----~~~~~i~~~-~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  252 (421)
                      +     ++++++++. +++| || ..+|.+++++|.++|++||+++|+||+|+++.+.|... .+...+..   +.+.||
T Consensus       192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~---~di~s~  266 (426)
T 1sff_A          192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVA---PDLTTF  266 (426)
T ss_dssp             HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSC---CSEEEE
T ss_pred             HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCCC---CCEEEE
Confidence            5     344555442 3467 99 78899999999999999999999999999876655422 22222211   224499


Q ss_pred             ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631          253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      ||+|+. |+|+||++++        +++++.+.... ..+.+++++.+.++.++|+...+.   +..++++++++.+.+.
T Consensus       267 sK~~~~-GlriG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~  334 (426)
T 1sff_A          267 AKSIAG-GFPLAGVTGR--------AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDG  334 (426)
T ss_dssp             CGGGGT-SSCCEEEEEE--------HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHH
T ss_pred             cccccC-CCceEEEEEc--------HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence            999986 9999999996        35666555422 234567888999888777642221   3345566666666666


Q ss_pred             hhc----CCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631          332 IKE----IPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA  402 (421)
Q Consensus       332 l~~----~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~  402 (421)
                      |++    ++.+. ...+. |+++|+.++....   +...+..++...+ .++||.+.||..+  ++++|++++  .++++
T Consensus       335 l~~~~~~~~~~~-~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~~~--~~~iRi~~~~~~~~~~  409 (426)
T 1sff_A          335 LLAIAEKHPEIG-DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQ  409 (426)
T ss_dssp             HHHHHHTCTTEE-EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHH-HHTTEECEEESTT--SCEEEECCCTTCCHHH
T ss_pred             HHHHHHhCCCeE-EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHH-HHCCcEEecCCCC--CCEEEEECCccCCHHH
Confidence            654    33333 21344 7789998853100   0001244566665 4679999998764  579999986  78999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 014631          403 LEEGLGRIKAFCQRHA  418 (421)
Q Consensus       403 l~~~~~~l~~~~~~~~  418 (421)
                      +++++++|++++++++
T Consensus       410 i~~~~~~l~~~l~~~~  425 (426)
T 1sff_A          410 IRQGLEIISQCFDEAK  425 (426)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998764

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=100.00  E-value=9.9e-34  Score=265.59  Aligned_cols=317  Identities=15%  Similarity=0.146  Sum_probs=236.1

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK  140 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~  140 (421)
                      ++++.+.+++.+.+...  ..+....++.++|+.++++++      ++++++++|+|+++++..++.++.++||+|++++
T Consensus        11 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g------~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~   82 (352)
T 1iug_A           11 RLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAFR------TEGEVLILTGSGTLAMEALVKNLFAPGERVLVPV   82 (352)
T ss_dssp             CCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHHT------CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHhC------CCCceEEEcCchHHHHHHHHHhccCCCCeEEEEe
Confidence            67889999988766431  111122346789999999883      5578999999999999999999999999999999


Q ss_pred             CCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--Cc
Q 014631          141 PGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GI  216 (421)
Q Consensus       141 p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~  216 (421)
                      |+|+++.  ..+...|.+++.++.+.  ++.+|++++++   ++++++++++|+||||.+++   +++|.++|++|  |+
T Consensus        83 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~  154 (352)
T 1iug_A           83 YGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPEG  154 (352)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTC
T ss_pred             CCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCC
Confidence            9999865  44566899999998754  34578888877   57889999999999999977   78899999999  99


Q ss_pred             EEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH---------H---
Q 014631          217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS---------I---  284 (421)
Q Consensus       217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~---------~---  284 (421)
                      ++|+|++|+..    .....+..++   ..+++.|+||+++.+ .++||+++++        ++.+.         +   
T Consensus       155 ~li~D~a~~~~----~~~~~~~~~~---~d~~~~s~~K~~~~~-~g~G~~~~~~--------~~~~~~~~~~~~~~~~~~  218 (352)
T 1iug_A          155 LVGADMVTSLL----VGEVALEAMG---VDAAASGSQKGLMCP-PGLGFVALSP--------RALERLKPRGYYLDLARE  218 (352)
T ss_dssp             EEEEECTTTBT----TBCCCSGGGT---CSEEEEESSSTTCCC-SCEEEEEECH--------HHHHTCCCCSSTTCHHHH
T ss_pred             EEEEECCcccc----CcceeccccC---eeEEEecCcccccCC-CceeEEEECH--------HHHHHhhCCCceeeHHHH
Confidence            99999999742    2111222222   347789999954332 3489999853        23322         1   


Q ss_pred             -hhh--cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC-ceeEEEEecCccccc
Q 014631          285 -KGY--LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE-GSMFVMVKLNLSLLE  360 (421)
Q Consensus       285 -~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~~~~  360 (421)
                       ...  ....++++...+.++.++++... .++++.+++++++++++.+.|+++ |+. +..|. .+.++|+.++..   
T Consensus       219 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~---  292 (352)
T 1iug_A          219 LKAQKEGESAWTPAINLVLAVAAVLEEVL-PRLEEHLALKAWQNALLYGVGEEG-GLR-PVPKRFSPAVAAFYLPEG---  292 (352)
T ss_dssp             HHHHTTTCCSSCCCHHHHHHHHHHHHHHG-GGHHHHHHHHHHHHHHHHHHHHHT-TCE-ESCSSBCTTCEEEECCTT---
T ss_pred             HhhcccCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccccccCCeEEEEEcCCC---
Confidence             111  12234677777777777776422 237888899999999999999987 887 43553 567888888631   


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                        .+..++...+ .++||.+.+|..+...+++|++++  ++++++++++++|+++++++.
T Consensus       293 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  349 (352)
T 1iug_A          293 --VPYARVKEAF-AQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL  349 (352)
T ss_dssp             --CCHHHHHHHH-HTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred             --CCHHHHHHHH-HHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence              1466777766 456999999885545689999998  579999999999999988764

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=100.00  E-value=2.1e-32  Score=260.91  Aligned_cols=317  Identities=14%  Similarity=0.105  Sum_probs=230.7

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHh---c-CCCCCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVR---S-AEFDCYSPSVGIL---PARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~---~-~~~~~y~~~~g~~---~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..+++.|.|.    ++.++.+.+++.+.++   . .....|+. .|.+   +++++++++++      .  +++++++|+
T Consensus        20 ~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g------~--~~~i~~~~g   86 (404)
T 1e5e_A           20 DQFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK------T--EACVATSSG   86 (404)
T ss_dssp             CTTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT------C--SEEEEESSH
T ss_pred             CCCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC------C--CcEEEeCCh
Confidence            3467888876    3444444444444443   2 22345765 5556   89999999983      2  367788888


Q ss_pred             HHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631          119 KQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP  194 (421)
Q Consensus       119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np  194 (421)
                      ++++..++.+++++||+|+++.|.|.++..    .++..|.+++.++.+       |++++++.++++++++++++|+||
T Consensus        87 ~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Np  159 (404)
T 1e5e_A           87 MGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANP  159 (404)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTT
T ss_pred             HHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCC
Confidence            899999999999999999999999999877    678889999888753       778999999888999999999999


Q ss_pred             cccccCHHHHHHHHHHHHh-cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCC
Q 014631          195 CGNVFTYQQLQKIAEKARK-LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPS  272 (421)
Q Consensus       195 tG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~  272 (421)
                      ||.+++   +++|+++|++ +|+++|+|++|+.+.+.    .++ .+   +..+++.|+||+|+++|.|+ ||+++++  
T Consensus       160 tG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~--  226 (404)
T 1e5e_A          160 TLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA--  226 (404)
T ss_dssp             TCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--
T ss_pred             CCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH--
Confidence            999985   8999999999 99999999999987643    122 22   34588999999999999998 9999863  


Q ss_pred             cchhHHHHHH-HHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC-------------
Q 014631          273 GILQELRIVD-SIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP-------------  336 (421)
Q Consensus       273 ~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------------  336 (421)
                            ++++ .+......  ..+.+++.+.++..+++.     ...+.++..++.+.+.+.+++.+             
T Consensus       227 ------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~  295 (404)
T 1e5e_A          227 ------DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDH  295 (404)
T ss_dssp             ------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSS
T ss_pred             ------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCC
Confidence                  4555 67665543  346788888888777764     23334444555555566665443             


Q ss_pred             -CccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----------------------
Q 014631          337 -CITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-----------------------  388 (421)
Q Consensus       337 -g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----------------------  388 (421)
                       ++.+. .+    .++++.| +++.        ..+.+..++++.|| +.+|..|+.                       
T Consensus       296 p~~~~~-~~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~  364 (404)
T 1e5e_A          296 EGHDIA-KKQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREA  364 (404)
T ss_dssp             TTHHHH-HHHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHH
T ss_pred             ccHHHH-HhhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHh
Confidence             22211 12    2555555 7752        33445667788899 556654441                       


Q ss_pred             ----CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          389 ----KNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       389 ----~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                          ++++|+|++.  |+++++++.|++++++..+
T Consensus       365 ~g~~~~~iRis~g~--e~~~~li~~l~~al~~~~~  397 (404)
T 1e5e_A          365 AGITDGMIRLSVGI--EDADELIADFKQGLDALLR  397 (404)
T ss_dssp             TTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHHH
Confidence                4789999998  8889999999988876543

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.3e-33  Score=268.44  Aligned_cols=327  Identities=12%  Similarity=0.088  Sum_probs=242.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF---DCYS----PSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~----~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      +.++|+.+.+.     +.++.+.+++.+.+.....   ..|.    ...+..++++.+++++      ++++++|++|+|
T Consensus        26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g   94 (406)
T 3cai_A           26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD   94 (406)
T ss_dssp             SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred             CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence            47888888754     5678999999998875211   1232    2344678999999988      356789999999


Q ss_pred             HHHHHHHHHHHh---cCCCCeEEEcCCCCcchHHHHhh----cCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631          118 CKQAIQVILTVL---ARPGANILLPKPGFPLYEANARH----TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN  190 (421)
Q Consensus       118 ~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~  190 (421)
                      +++++.+++.++   .++||+|+++.|+|+++...+..    .|.+++.++++++ ++.+|++++++.+++++++|++++
T Consensus        95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~  173 (406)
T 3cai_A           95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNS  173 (406)
T ss_dssp             HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEES
T ss_pred             hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeC
Confidence            999999999887   78999999999999987555443    6999999987633 456899999999988899999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE-EEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG-WLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~  269 (421)
                      |+||||.+++   +++|.++|+++|+++|+|++|+..    ....++..++   ..+++.|+||+++ ++  +| |++++
T Consensus       174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~  240 (406)
T 3cai_A          174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAP----YRLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRD  240 (406)
T ss_dssp             BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTT----TCCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred             CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEe
Confidence            9999999987   788899999999999999999852    2212232333   3478899999864 44  89 99885


Q ss_pred             CCCcchhHHHHHHHHhhhcc----------cccCCchHHHHHHHHHhhccch--------------hHHHHHHHHHHHHH
Q 014631          270 DPSGILQELRIVDSIKGYLN----------ISSGPATFVQGAVPQIFKNTKE--------------DFFSKIVDILRDTA  325 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~~~  325 (421)
                              +++.+.+.....          ..++++...+.++.++++....              .++++..+++++++
T Consensus       241 --------~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (406)
T 3cai_A          241 --------PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVF  312 (406)
T ss_dssp             --------HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHH
Confidence                    346665544321          1245666666565555543211              15788889999999


Q ss_pred             HHHHHHhhcCCCccccCCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC------CCCC---CCeEEE
Q 014631          326 DICYDRIKEIPCITCPRKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM------AVGM---KNWLRI  394 (421)
Q Consensus       326 ~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------~~~~---~~~iRi  394 (421)
                      +++.+.|+++|++. +..|.  .+.++++.++..      +..++...| .++||.+.+|.      .++.   .+++|+
T Consensus       313 ~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~~~~iRi  384 (406)
T 3cai_A          313 DYLMVSLRSLPLVM-LIGRPEAQIPVVSFAVHKV------PADRVVQRL-ADNGILAIANTGSRVLDVLGVNDVGGAVTV  384 (406)
T ss_dssp             HHHHHHHHTCTTEE-ECCCCSSBCSEEEEEETTB------CHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTTTCCEEE
T ss_pred             HHHHHHHhcCCCeE-EcCCccccCCEEEEEECCc------CHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCCCCeEEE
Confidence            99999999988887 33443  233677776521      456666665 66899999987      2332   478999


Q ss_pred             Eec--CCHHHHHHHHHHHHH
Q 014631          395 TFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       395 ~~~--~~~e~l~~~~~~l~~  412 (421)
                      +++  ++++++++++++|++
T Consensus       385 s~~~~~t~e~i~~~~~~l~~  404 (406)
T 3cai_A          385 GLAHYSTMAEVDQLVRALAS  404 (406)
T ss_dssp             ECCTTCCHHHHHHHHHHHHT
T ss_pred             EeecCCCHHHHHHHHHHHHH
Confidence            998  589999999999875

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=7.1e-33  Score=265.23  Aligned_cols=331  Identities=12%  Similarity=0.092  Sum_probs=243.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--C----CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--F----DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~----~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      .|.+++||+.+++   .+++.++.+.+++.+++.+..  .    ..|+......++++.++++++      .  +..+++
T Consensus        57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~--~~~i~~  125 (409)
T 3kki_A           57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG------F--DECLLS  125 (409)
T ss_dssp             CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT------C--SEEEEE
T ss_pred             CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC------C--CeEEEe
Confidence            4778999987753   346678999999999987621  1    122333446789999999873      2  234555


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCC
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNP  194 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~np  194 (421)
                      ++|++++..++.+++++||.|+++.|+|.++...+...|.+++.++.       .|++++++.+.+ +++++++++|+||
T Consensus       126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~np  198 (409)
T 3kki_A          126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYST  198 (409)
T ss_dssp             SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTT
T ss_pred             cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence            66679999999999999999999999999999999999999887764       489999998865 4788999999999


Q ss_pred             cccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      ||.+++   +++|+++|++||+++|+||+|+.+.++  |.......... .+..+++.|+||+|+++|   ||+++++. 
T Consensus       199 tG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~-~~~di~~~s~sK~~~~~g---g~v~~~~~-  270 (409)
T 3kki_A          199 LGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLT-REVHFMTASLAKTFAYRA---GAIWCNNE-  270 (409)
T ss_dssp             TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSC---EEEEESSS-
T ss_pred             CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCC-CCCCEEEeecchhhCCCc---eEEEECHH-
Confidence            999987   889999999999999999999885443  33222211221 123488899999987664   99988642 


Q ss_pred             cchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631          273 GILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF  349 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~  349 (421)
                             +++.+....   ....+.++..+.++.++++..  ...++.+++++++++++.+.|+++ ++. + . ..+++
T Consensus       271 -------~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~-~~~~~  337 (409)
T 3kki_A          271 -------VNRCVPFISYPAIFSSTLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLT-I-R-SESQI  337 (409)
T ss_dssp             -------GGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCC-C-C-CSSSE
T ss_pred             -------HHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-C-CCCCE
Confidence                   233332221   122345666777777777642  122677888999999999999988 777 3 2 46778


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +|+.++...     +..++...|+ ++||.+.++..+..   .+++|++++  ++++++++++++|++++++.
T Consensus       338 ~~~~~~~~~-----~~~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~  404 (409)
T 3kki_A          338 IGLETGDER-----NTEKVRDYLE-SNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG  404 (409)
T ss_dssp             EEEEEESHH-----HHHHHHHHHH-HTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEeCCHH-----HHHHHHHHHH-HCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence            888886421     2445666664 55999988665422   468999997  68999999999999998763

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=6.8e-33  Score=264.04  Aligned_cols=320  Identities=13%  Similarity=0.059  Sum_probs=235.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC--------
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP--------  132 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~--------  132 (421)
                      ++++.+.+++.+.+.... ..+....+..++++.+++++.+.+|  .++++|++|+|+++++..++.++.++        
T Consensus        41 ~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~  117 (397)
T 3f9t_A           41 NVLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKG  117 (397)
T ss_dssp             CCCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhc
Confidence            456788999998876531 1222222345666667777766665  56789999999999999999998765        


Q ss_pred             -----CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHH
Q 014631          133 -----GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQK  206 (421)
Q Consensus       133 -----gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~  206 (421)
                           ||+|+++.|+|+++...++..|.+++.++.++  ++.+|++++++.+.+ +++++++++|+||||.+.+   +++
T Consensus       118 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~  192 (397)
T 3f9t_A          118 LSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEE  192 (397)
T ss_dssp             CCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHH
T ss_pred             ccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHH
Confidence                 99999999999999999999999999998754  467899999999988 8999999999999999965   888


Q ss_pred             HHHHHHhcCcEEEEcccccccccCCCCc--------ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          207 IAEKARKLGIMVISDEVYDHLTFGSTPY--------VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       207 i~~~~~~~~~~li~De~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      |.++|++||+++|+||+|+.+.+.....        .++ .+.. +..+++.|+||+ +.+|.|+|+++++++.      
T Consensus       193 i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~~------  263 (397)
T 3f9t_A          193 LSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-DFSL-GVDSITIDPHKM-GHCPIPSGGILFKDIG------  263 (397)
T ss_dssp             HHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-SGGG-TCSEEECCTTTT-TCCCSSCEEEEESSGG------
T ss_pred             HHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-cccc-cCCeEEEccccc-cCCCCCceEEEEeCHH------
Confidence            9999999999999999998765321110        011 1111 234778899998 4677899999986532      


Q ss_pred             HHHHHHhhhcccc---------c---CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          279 RIVDSIKGYLNIS---------S---GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       279 ~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                       +.+.+.......         +   +.+...+.++...+.   ..++++..++++++++++.+.|+++ ++..+ .+..
T Consensus       264 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~  337 (397)
T 3f9t_A          264 -YKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKEN-NFKPV-IEPI  337 (397)
T ss_dssp             -GGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCCS
T ss_pred             -HHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cCCC
Confidence             223222111110         1   123444555544443   4667888889999999999999988 87744 4455


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      +.++++.++        +..++...+ .++||.+.+|..   ++++|++++  ++++++++++++|+++++
T Consensus       338 ~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          338 LNIVAIEDE--------DYKEVCKKL-RDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             SSEEEEECT--------THHHHHHHH-HHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred             ccEEEEEeC--------CHHHHHHHH-HhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence            667777665        245666655 566999999864   589999998  689999999999998864

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=100.00  E-value=2.2e-33  Score=266.36  Aligned_cols=319  Identities=13%  Similarity=0.130  Sum_probs=237.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP--DDVYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~--~~i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      .+.++.+.+++.+.+....  .+.....+.++++.++++++      .++  ++|++|+|+++++. ++..++++||+|+
T Consensus        11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~la~~~~------~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi   81 (384)
T 3zrp_A           11 TTIKEDVLVAGLENNVGFT--SKEFVEALAYSLKGLRYVMG------ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL   81 (384)
T ss_dssp             SCCCHHHHHHTTCCSCCTT--SHHHHHHHHHHHHHHHHHHT------CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred             CCCCHHHHHHhhccccccc--cHHHHHHHHHHHHHHHHHhC------CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence            3677888888776543210  11112335677777777773      444  88999999999999 8988999999999


Q ss_pred             EcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          138 LPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       138 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      +++++|++  +...+...|.+++.++++.  ++.+|++++++.+.+ +++++++++|+||||.+++   +++|.++|++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  156 (384)
T 3zrp_A           82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY  156 (384)
T ss_dssp             EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred             EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence            99999976  5666788899999998764  346899999999877 7899999999999999987   78899999999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHH----------
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI----------  284 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----------  284 (421)
                      |+++|+|++|+....    ...+...   +..+++.|+||+++. +.++|++++++        ++++.+          
T Consensus       157 ~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~~  220 (384)
T 3zrp_A          157 VELIVVDGVSSVGAE----EVKAEEW---NVDVYLTASQKALGS-AAGLGLLLLSP--------KALSILDSQNSIAGYY  220 (384)
T ss_dssp             EEEEEEECTTTTTTS----CCCTTTT---TCSEEEEETTSTTCC-CSSEEEEEECH--------HHHHHHHHCCCSCCST
T ss_pred             CCEEEEECcccccCc----ccccccc---CCCEEEecCcccccC-CCceEEEEECH--------HHHHHhcCCCCCCccc
Confidence            999999999986321    1122222   234888999998642 34489999863        344444          


Q ss_pred             ---hhh----------c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----c
Q 014631          285 ---KGY----------L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----G  346 (421)
Q Consensus       285 ---~~~----------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----~  346 (421)
                         ...          . ..+++++...+.++..+++.....++++..++++++++++.+.|+++ ++. +..+.    .
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~  298 (384)
T 3zrp_A          221 LDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLE-IVARRPESYS  298 (384)
T ss_dssp             TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSCSSGGGBC
T ss_pred             ccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCe-EccCcccccC
Confidence               111          1 11136676777777677764334457888999999999999999988 887 43444    4


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +.++++.++.      .+..++...+ .++||.+.+|..+.. +++|++++  ++++++++++++|++++++++
T Consensus       299 ~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~  364 (384)
T 3zrp_A          299 NTVTGVILKV------ADPQKVLAGT-VNEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG  364 (384)
T ss_dssp             SSEEEEECSS------SCHHHHHHHH-HTTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             ccEEEEECCC------CCHHHHHHHH-HHCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence            6677788764      1466777766 456999999874433 89999987  789999999999999998765

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=100.00  E-value=1.2e-33  Score=265.47  Aligned_cols=330  Identities=11%  Similarity=0.124  Sum_probs=230.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      .+.+|||+.+.+.     ++++.+.+++.+.+.. ....|++.....++++.+++++    |   .+.+|++|+|+++++
T Consensus         6 ~~~~id~~~~~~~-----~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~   72 (356)
T 1v72_A            6 RPPALGFSSDNIA-----GASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN   72 (356)
T ss_dssp             CCCCCBCSCGGGC-----CCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred             CCceEeeccCCcc-----CCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence            5678999987543     5678999999887532 1235654444456666666665    3   245699999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHH--Hhhc--CceeEeeeccCCCCccCCHHHHHh-hhcc-------CceEEEEeC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEAN--ARHT--RLEIRHFDLLPEKGWEVDLDGLEA-LADE-------NTVAMVIVN  190 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~e~l~~-~~~~-------~~~~i~~~~  190 (421)
                      ..++.++.++||+|+++.|+|.+....  +...  |.+++.++.+   ++.+|++++++ .+.+       ++++|++++
T Consensus        73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~  149 (356)
T 1v72_A           73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ  149 (356)
T ss_dssp             HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred             HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence            999999999999999999999876554  5666  9898888763   35789999999 8875       578889999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      |+| ||.++|.+++++|.++|++||+++|+|++|..+..  .+.....+ .++.... +++.|+||+ +. ...+||+++
T Consensus       150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~-~~G~g~~~~  224 (356)
T 1v72_A          150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GV-LAAEAIVLF  224 (356)
T ss_dssp             SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TC-SSCEEEEES
T ss_pred             CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CC-cCccEEEEE
Confidence            987 99999999999999999999999999999976421  12211111 1111112 345589998 44 233447776


Q ss_pred             eCCCcchhHHHHHHHHhhhccc---ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631          269 SDPSGILQELRIVDSIKGYLNI---SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE  345 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~  345 (421)
                      ++        ++++.+......   ..........++...++   +..+.+..++++++++++.+.|++++|+.+. .|.
T Consensus       225 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~  292 (356)
T 1v72_A          225 NT--------SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLT---DDLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGT  292 (356)
T ss_dssp             SG--------GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-SCC
T ss_pred             CH--------HHHhhHHHHhhccCchhhhHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEc-cCC
Confidence            42        233443332211   11112222322333443   2345556778889999999999988888843 577


Q ss_pred             ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +++++|+.++          .+++..+ .++||.+.||. |+ ++++|++++  ++++++++++++|++++++.+
T Consensus       293 ~~~~~~~~~~----------~~~~~~l-~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~  354 (356)
T 1v72_A          293 EANILFCRLD----------SAMIDAL-LKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ  354 (356)
T ss_dssp             CSSEEEEEEC----------HHHHHHH-HHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred             CccEEEEEcC----------HHHHHHH-HhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence            7888998774          2566665 56799999987 55 789999987  689999999999999877653

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=100.00  E-value=6.4e-33  Score=265.68  Aligned_cols=320  Identities=13%  Similarity=0.054  Sum_probs=238.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCc-EEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~-i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      ++++.+.+++.+.+    ...|.+.  ....++++.++++++      .++++ +++++|+++++..++.+++++||+|+
T Consensus        23 ~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl   92 (411)
T 3nnk_A           23 NADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVFR------TENRWTMLVDGTSRAGIEAILVSAIRPGDKVL   92 (411)
T ss_dssp             CCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHHT------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHhC------CCCCcEEEECCCcHHHHHHHHHHhcCCCCEEE
Confidence            56788888776543    1222211  123566666666663      34444 78899999999999999999999999


Q ss_pred             EcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          138 LPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       138 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      +++|+|++  +...++..|.+++.++.+  .++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|++|
T Consensus        93 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  167 (411)
T 3nnk_A           93 VPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRRY  167 (411)
T ss_dssp             EEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred             EecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHHc
Confidence            99999987  888888999999999874  3456899999999876 8999999999999999976   77899999999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc------
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL------  288 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------  288 (421)
                      |+++|+|++|+...    ....+...   +..+++.|+||+++ ++.++|+++++        +++.+.+....      
T Consensus       168 ~~~li~Dea~~~~~----~~~~~~~~---~~d~~~~s~~K~l~-~~~g~g~~~~~--------~~~~~~~~~~~~~~~~~  231 (411)
T 3nnk_A          168 DALFYTDATASLGG----NPLETDVW---GLDAVSAGMQKCLG-GPSGTSPITLS--------ARMEEAIRRRKCVEEGI  231 (411)
T ss_dssp             TCEEEEECTTTBTT----BCCCTTTT---TCSEEECCSTTTTC-CCSSEEEEEEC--------HHHHHHHHTTCCCCGGG
T ss_pred             CCEEEEECCcccCC----cccchhcc---CCcEEEecCccccC-CCCceEEEEEC--------HHHHHHHhhcccccccc
Confidence            99999999987622    11222222   23488899999743 33458999985        35666655432      


Q ss_pred             -------------------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          289 -------------------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       289 -------------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                                                     ...++++...+.++.++++...+.++++..++++++++++.+.|+++ +
T Consensus       232 ~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g  310 (411)
T 3nnk_A          232 RTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-G  310 (411)
T ss_dssp             CCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             cccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-C
Confidence                                           11235677777777777764333447888999999999999999987 7


Q ss_pred             ccccCCCCc---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHH
Q 014631          338 ITCPRKPEG---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIK  411 (421)
Q Consensus       338 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~  411 (421)
                      +.+. .+.+   +.++++.++..     .+..++...+++++||.+.+|.....++++|+++ +  ++++++++++++|+
T Consensus       311 ~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~  384 (411)
T 3nnk_A          311 LETF-GDLKHKMNNVLGVVIPQG-----INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALE  384 (411)
T ss_dssp             CCBC-SCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred             CEeC-CCcccccccEEEEECCCC-----CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHH
Confidence            7733 4443   56777777532     2466777777666799999986555578999998 5  47999999999999


Q ss_pred             HHHHHhh
Q 014631          412 AFCQRHA  418 (421)
Q Consensus       412 ~~~~~~~  418 (421)
                      ++++++.
T Consensus       385 ~~l~~~~  391 (411)
T 3nnk_A          385 AVLNYLK  391 (411)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHcC
Confidence            9998764

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=100.00  E-value=2.8e-33  Score=263.19  Aligned_cols=332  Identities=12%  Similarity=0.081  Sum_probs=236.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      .+.+++|+.+.+.     ++++.+.+++.+.+.     .|....|..++++.+++++.+.+|  .++++|++|+|+++++
T Consensus        12 ~p~~i~l~~~~~~-----~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~   79 (359)
T 1svv_A           12 KPKPYSFVNDYSV-----GMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN   79 (359)
T ss_dssp             ---CEECSCSCSS-----CCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred             CCeeEEecCCCcC-----CCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence            4668999986533     578899999998875     355556677888888888888776  5678999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHH--HHhhcCceeEeeeccCCCCccCCHHHHHhhhccC-------ceEEEEeCCCC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEA--NARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN-------TVAMVIVNPGN  193 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~-------~~~i~~~~p~n  193 (421)
                      ..+++.+.++||+|++++|+|+++..  .++..|.+++.++.+   ++.+|++++++.++++       ++++++++| |
T Consensus        80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~  155 (359)
T 1svv_A           80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T  155 (359)
T ss_dssp             HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred             HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence            99999999999999999999998877  477889999988863   5679999999988765       788889998 7


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      |||.++|.+++++|.++|++||+++|+||+|.++.++..+. ....+.. ....++..|++|. +.+ .++|++++++  
T Consensus       156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~--  230 (359)
T 1svv_A          156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND--  230 (359)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--
T ss_pred             CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--
Confidence            99999999999999999999999999999995543221111 1111000 0112667789998 443 4579998853  


Q ss_pred             cchhHHHHHHHHhhh---cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631          273 GILQELRIVDSIKGY---LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF  349 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~  349 (421)
                            ++++.+...   .......+.....++..+++.   ..+++..++++++++++.+.| +.+++. +..|.++++
T Consensus       231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~~~~~~~  299 (359)
T 1svv_A          231 ------ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIR-LAWPSASNQ  299 (359)
T ss_dssp             ------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCC-BSSCCSSSE
T ss_pred             ------cHHHHHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeE-EccCCccce
Confidence                  122222221   111111122222233344543   456778889999999999999 556888 446778888


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +|+.++          .++...+++++||.+.+. ....++++|++++  ++++++++++++|++++++.
T Consensus       300 ~~~~~~----------~~~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  358 (359)
T 1svv_A          300 LFPILE----------NTMIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST  358 (359)
T ss_dssp             ECBEEE----------HHHHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred             EEEEcC----------HHHHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence            887663          356666655559998331 1123568999986  68999999999999987653

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=100.00  E-value=3e-33  Score=266.26  Aligned_cols=323  Identities=12%  Similarity=0.054  Sum_probs=238.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL  138 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~  138 (421)
                      +.++.+.+++.+.+..    .+.+  .....++++.++++++    .. .+++|++|+|+++++..+++++.++||+|++
T Consensus        33 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~----~~-~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~  103 (393)
T 3kgw_A           33 NLAPRVLAAGSLRMIG----HMQKEMLQIMEEIKQGIQYVFQ----TR-NPLTLVVSGSGHCAMETALFNLLEPGDSFLT  103 (393)
T ss_dssp             CCCHHHHHHTTCCCCC----TTSHHHHHHHHHHHHHHHHHHT----CC-CSEEEEESCCTTTHHHHHHHHHCCTTCEEEE
T ss_pred             CCCHHHHHHhcccccC----cccHHHHHHHHHHHHHHHHHhC----CC-CCcEEEEeCCcHHHHHHHHHhcCCCCCEEEE
Confidence            5778888887653321    2211  1224566777777763    11 2346999999999999999999999999999


Q ss_pred             cCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631          139 PKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG  215 (421)
Q Consensus       139 ~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~  215 (421)
                      +.++|++  +...+...|.+++.++.+.+  +.+|++++++.+++ +++++++++|+||||.+++   +++|.++|++||
T Consensus       104 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  178 (393)
T 3kgw_A          104 GTNGIWGMRAAEIADRIGARVHQMIKKPG--EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRYQ  178 (393)
T ss_dssp             EESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTT
T ss_pred             EeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHcC
Confidence            9988864  36777888999999987543  35899999999987 8999999999999999987   778999999999


Q ss_pred             cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc------
Q 014631          216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN------  289 (421)
Q Consensus       216 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------  289 (421)
                      +++|+|++|+...    ....+...   +..+++.|+||+++. +.++|+++++        +++++.+.....      
T Consensus       179 ~~li~De~~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~-~~g~g~~~~~--------~~~~~~~~~~~~~~~~~~  242 (393)
T 3kgw_A          179 CLLLVDSVASLGG----VPIYMDQQ---GIDIMYSSSQKVLNA-PPGISLISFN--------DKAKYKVYSRKTKPVSFY  242 (393)
T ss_dssp             CEEEEECTTTTTT----SCCCTTTT---TCCEEEEESSSTTCC-CSSCEEEEEC--------HHHHHHHHTCSSCCSCST
T ss_pred             CEEEEECCccccC----cccchhhc---CCCEEEecCcccccC-CCceeEEEEC--------HHHHHHHhccCCCCCcee
Confidence            9999999998521    11122222   234778899997632 2348999985        356666654221      


Q ss_pred             ------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc----e
Q 014631          290 ------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG----S  347 (421)
Q Consensus       290 ------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~----~  347 (421)
                                        ..++++...+.++.++++...+.++++..++++++++++.+.|+++ ++.+. .+..    +
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~  320 (393)
T 3kgw_A          243 TDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFF-VKDPEIRLP  320 (393)
T ss_dssp             TCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGBCS
T ss_pred             ecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhcCC
Confidence                              1235677777777777764334567888999999999999999988 77732 2332    4


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      .+.++.++..     .+..++...+++++||.+.+|..+..++++|+++ +  .+++++++++++|+++++++.++
T Consensus       321 ~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~  391 (393)
T 3kgw_A          321 TITTVTVPAG-----YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPKN  391 (393)
T ss_dssp             SEEEEECCTT-----BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred             eEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence            5667777532     1466777777666699999998776788999998 6  48999999999999999987654

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=100.00  E-value=1.5e-33  Score=264.41  Aligned_cols=318  Identities=14%  Similarity=0.063  Sum_probs=235.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL  138 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~  138 (421)
                      .+.++.+.+++.+.+..   +.|. ...+..++++.++++++    ...+++++++|+|+++++..+++.+.+  |+|++
T Consensus         9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~   79 (353)
T 2yrr_A            9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR--GPVLV   79 (353)
T ss_dssp             CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred             CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence            36788898888776543   2232 12346788888888873    233468899999999999999998876  89999


Q ss_pred             cCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631          139 PKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG  215 (421)
Q Consensus       139 ~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~  215 (421)
                      ++++|+++  ...++..|.+++.++.++  ++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|++||
T Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~  154 (353)
T 2yrr_A           80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG  154 (353)
T ss_dssp             EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred             EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence            99999874  455677899999998754  456899999999887 7899999999999999987   678899999999


Q ss_pred             cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHHHHHhh--------
Q 014631          216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIVDSIKG--------  286 (421)
Q Consensus       216 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------  286 (421)
                      +++|+|++|+...    ...++..++.   .+++.|++|+++ .+|  +||+++++        ++++.+..        
T Consensus       155 ~~li~D~a~~~~~----~~~~~~~~~~---d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~  217 (353)
T 2yrr_A          155 ALFFLDAVTTLGM----LPFSMRAMGV---DYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDL  217 (353)
T ss_dssp             CEEEEECTTTTTT----SCCCHHHHTC---SEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCH
T ss_pred             CeEEEEcCccccc----ccccccccCc---eEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccccH
Confidence            9999999996422    1223333332   377889999643 355  79999863        45554431        


Q ss_pred             --------hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEEecCc
Q 014631          287 --------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMVKLNL  356 (421)
Q Consensus       287 --------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~~~  356 (421)
                              .....++++...+.++.++++...+.++++.+++++++++++.+.|+++ |+.+. .+.  .++++|+.++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~  295 (353)
T 2yrr_A          218 ARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRPPE  295 (353)
T ss_dssp             HHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEECCT
T ss_pred             HHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEECCC
Confidence                    1122346677777777777764333447788899999999999999987 88733 443  45666787753


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHH-HHHHHHHHHHHH
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALE-EGLGRIKAFCQR  416 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~-~~~~~l~~~~~~  416 (421)
                      .     .+..++...+ .++||.+.+|..|..++++|++++  .++++++ +++++|++++++
T Consensus       296 ~-----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~  352 (353)
T 2yrr_A          296 G-----VDADRLVRAL-YAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL  352 (353)
T ss_dssp             T-----CCHHHHHHHH-HHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred             C-----CCHHHHHHHH-HHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence            1     1456677666 556999999987766789999994  7888888 999999998753

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=3.2e-33  Score=264.49  Aligned_cols=327  Identities=13%  Similarity=0.168  Sum_probs=238.3

Q ss_pred             CCCCeeeccCCCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           42 DPRPIIPLGHGDPSAFPCFR-TTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .+..++||+.|.|..  .+. +++.+.+++.+.+...  ....| +..+..++++.+++++    |  . ++++++|+|+
T Consensus        26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g--~-~~~v~~~~g~   95 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----W--T-EGKVFFANSG   95 (375)
T ss_dssp             TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----S--S-CEEEEEESSH
T ss_pred             CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----C--C-CCeEEEeCch
Confidence            467899999987642  234 7899999999998753  12346 3456678888888886    2  3 4899999999


Q ss_pred             HHHHHHHHHH---hc---CCC-CeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCCcc----CCHHHHHhhhccCc
Q 014631          119 KQAIQVILTV---LA---RPG-ANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKGWE----VDLDGLEALADENT  183 (421)
Q Consensus       119 ~~al~~~~~~---l~---~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~~----~d~e~l~~~~~~~~  183 (421)
                      ++++..+++.   +.   ++| |+|++++|+|+++...+...+....    ..+..  .++.    .|++++++.+++++
T Consensus        96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~  173 (375)
T 2eh6_A           96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLV--PGFSYAKLNDIDSVYKLLDEET  173 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCC--SSEEEECTTCHHHHHTTCCTTE
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCC--CCceeCCCchHHHHHHHhcCCe
Confidence            9999999875   35   788 9999999999988665554432211    01111  0111    48999999998888


Q ss_pred             eEEEEeCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          184 VAMVIVNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       184 ~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      +++++++|+||||.++ +.+++++|.++|++||+++|+||+|+++...+... ++..++...+++   ||||.++ +|+|
T Consensus       174 ~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~d~~---s~SK~~~-~g~~  248 (375)
T 2eh6_A          174 AGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFNLKPDVI---ALAKGLG-GGVP  248 (375)
T ss_dssp             EEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG-TTSC
T ss_pred             EEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcCCCCCEE---EEccccc-CCCC
Confidence            9998988899999984 68889999999999999999999999765444322 333333222333   7889987 6999


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP  341 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  341 (421)
                      +||++++        +++++.+.... ..+.+.+++.+.++.++|+..     ++..++++++++++.+.|++++. . .
T Consensus       249 ~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~~-~-~  313 (375)
T 2eh6_A          249 IGAILAR--------EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELGK-G-K  313 (375)
T ss_dssp             CEEEEEE--------HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTS-S-E
T ss_pred             eEEEEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhc-C-C
Confidence            9999986        34666555421 123356778888877777641     16677888899999999988743 2 2


Q ss_pred             CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                       .+..++++|+.++.       +..+++..+ .++||.+.|+.    .+++|++++  .+++++++++++|+++
T Consensus       314 -~~~~g~~~~~~~~~-------~~~~~~~~l-~~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          314 -VKGRGLMLGLELER-------ECKDYVLKA-LEKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI  374 (375)
T ss_dssp             -EEEETTEEEEECSS-------CCHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             -ceEEEEEEEEEEcC-------cHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence             24457788988863       245677666 46899999863    578999986  7899999999999876

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=7.1e-33  Score=264.96  Aligned_cols=341  Identities=16%  Similarity=0.205  Sum_probs=240.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .+..++||..|.+..+.+ ..++.+.+++.+++.+...  ..| +.....++++.+++++    |    .+++++|+|++
T Consensus        37 ~g~~~lD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~----~~~v~~~~gg~  106 (406)
T 4adb_A           37 QGKEYIDFAGGIAVNALG-HAHPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFFCNSGA  106 (406)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEEESSHH
T ss_pred             CCCEEEECCCchhhcccC-CCCHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC----C----CCeEEEeCcHH
Confidence            477899999885433333 3688999999999876311  122 2222345555555554    3    45999999999


Q ss_pred             HHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCceeEee-eccC-CCCcc----CCHHHHHhhhccCceE
Q 014631          120 QAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLEIRHF-DLLP-EKGWE----VDLDGLEALADENTVA  185 (421)
Q Consensus       120 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~-~~~~~----~d~e~l~~~~~~~~~~  185 (421)
                      +|+..+++.+..       +| |+|++.+|+|+++...+...+...... ...+ ..++.    .|++++++.+++++++
T Consensus       107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  186 (406)
T 4adb_A          107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCA  186 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEE
Confidence            999999998864       66 999999999999865555444321110 0000 00111    3899999999888888


Q ss_pred             EEEeCCCCCccccc--CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631          186 MVIVNPGNPCGNVF--TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL  263 (421)
Q Consensus       186 i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  263 (421)
                      ++++ |+||||.++  +.+++++|.++|++||+++|+||+|+++.+.|... .+...+...+++   ||||.++ +|+|+
T Consensus       187 v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~~-~G~r~  260 (406)
T 4adb_A          187 VIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKALG-GGFPV  260 (406)
T ss_dssp             EEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-TTSCC
T ss_pred             EEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhhc-CCCCe
Confidence            8777 999999988  99999999999999999999999999877666543 222333333344   6799988 89999


Q ss_pred             EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC----CCc
Q 014631          264 GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI----PCI  338 (421)
Q Consensus       264 G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~  338 (421)
                      ||++++        +++++.+..... .+.+++++.+.++.++++....   ++..++++++++++.+.|+++    +.+
T Consensus       261 G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~  329 (406)
T 4adb_A          261 GALLAT--------EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLF  329 (406)
T ss_dssp             EEEEEC--------HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             EEEEEc--------HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            999985        457776665532 3457888999998888864222   566677778888888877754    122


Q ss_pred             cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                      . . .+..+.++++.++...   ..+..++...+ .++||.+.|+.    .+++|++++  .+++++++++++|++++++
T Consensus       330 ~-~-~~~~g~~~~~~~~~~~---~~~~~~~~~~l-~~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~  399 (406)
T 4adb_A          330 S-E-VRGLGLLIGCVLNADY---AGQAKQISQEA-AKAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEH  399 (406)
T ss_dssp             E-E-EEEETTEEEEEECTTT---TTCHHHHHHHH-HHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             e-E-EEEEEEEEEEEEeCCc---HHHHHHHHHHH-HHCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            1 1 1234678888886421   01356677665 55699999864    589999765  7999999999999999988


Q ss_pred             hhh
Q 014631          417 HAK  419 (421)
Q Consensus       417 ~~~  419 (421)
                      +.+
T Consensus       400 ~~~  402 (406)
T 4adb_A          400 FVS  402 (406)
T ss_dssp             HHC
T ss_pred             HHh
Confidence            764

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=100.00  E-value=8.9e-33  Score=260.35  Aligned_cols=331  Identities=12%  Similarity=0.108  Sum_probs=241.8

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ++++|+.| |.     +.++.+.+++.+.+.    +.|+.  ..+..++|+.++++++.    +.+++++++|+|+++++
T Consensus         4 ~~~~~~~g-p~-----~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~~~g~t~a~   69 (366)
T 1m32_A            4 NYLLLTPG-PL-----TTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALATA----SEGYTSVLLQGSGSYAV   69 (366)
T ss_dssp             -CEECSSS-SC-----CCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHCS----SSSEEEEEEESCHHHHH
T ss_pred             ccccccCC-Cc-----CCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhCC----CCcCcEEEEecChHHHH
Confidence            36889888 43     477889888876421    22321  16678999999999841    22345799999999999


Q ss_pred             HHHHHHhcCCCCeEEEcC-CCCcc-hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccc
Q 014631          123 QVILTVLARPGANILLPK-PGFPL-YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNV  198 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~-p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~  198 (421)
                      ..+++++.++||+|++.+ +.|.. +...+...|.+++.++.+.  .+.+|++++++.+++  +++++++++|+||||.+
T Consensus        70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~  147 (366)
T 1m32_A           70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML  147 (366)
T ss_dssp             HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred             HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence            999999999999988776 55543 5567788899999998753  456899999998865  47888899999999999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      ++   +++|.++|++||+++|+|++|+.+..    ...+...   +..+++.|+||+++. +.++||+++++        
T Consensus       148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~~K~~~~-~~g~G~~~~~~--------  208 (366)
T 1m32_A          148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAAL---HIDYLISSANKCIQG-VPGFAFVIARE--------  208 (366)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTT---TCSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred             cC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccccc---CccEEEecCcccccC-CCceEEEEECH--------
Confidence            87   78999999999999999999986332    1122222   234889999998633 23479999963        


Q ss_pred             HHHHHHhhhc-------------------ccccCCchHHHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631          279 RIVDSIKGYL-------------------NISSGPATFVQGAVPQIFKNTKEDF-FSKIVDILRDTADICYDRIKEIPCI  338 (421)
Q Consensus       279 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~g~  338 (421)
                      ++++.+....                   ....+++...+.++.++++...... +++..++++++++++.+.|+++ ++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~  287 (366)
T 1m32_A          209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GF  287 (366)
T ss_dssp             HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CC
Confidence            3444433210                   0013667777777777776432222 6788899999999999999987 77


Q ss_pred             cccCCC---CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          339 TCPRKP---EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       339 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      .+. .+   ..++++|+.++...   ..+..++...+ .++||.+.+|..| ..+++|++++  ++++++++++++|+++
T Consensus       288 ~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l-~~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~  361 (366)
T 1m32_A          288 NTL-LDDELHSPIITAFYSPEDP---QYRFSEFYRRL-KEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTA  361 (366)
T ss_dssp             CBS-SCGGGBCSSEEEEECCCCT---TCCHHHHHHHH-HHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             eec-cCchhcCceEEEEEcCccC---CCCHHHHHHHH-HHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            733 33   35668888886310   11456677666 4569999999877 4679999998  5899999999999988


Q ss_pred             HHHh
Q 014631          414 CQRH  417 (421)
Q Consensus       414 ~~~~  417 (421)
                      ++++
T Consensus       362 ~~~~  365 (366)
T 1m32_A          362 MYWT  365 (366)
T ss_dssp             CTTC
T ss_pred             HHhc
Confidence            7543

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=100.00  E-value=1.7e-32  Score=263.21  Aligned_cols=320  Identities=13%  Similarity=0.079  Sum_probs=233.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEE-EcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVY-LTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~-~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      +.++.+.+++.+    .....|.+  .....++++.+++++    |  .+++.++ +++|+++++..++.++.++||+|+
T Consensus        21 ~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl   90 (416)
T 3isl_A           21 EVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF----Q--TKNRWAYPIDGTSRAGIEAVLASVIEPEDDVL   90 (416)
T ss_dssp             CCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT----T--CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh----C--CCCCcEEEecCcHHHHHHHHHHHhcCCCCEEE
Confidence            456777666544    22223322  122345566666655    3  4566665 889999999999999999999999


Q ss_pred             EcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          138 LPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       138 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      +++|+|++  +...++..|.+++.++++.+  +.+|++++++.++ ++++++++++|+||||..++   +++|.++|++|
T Consensus        91 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  165 (416)
T 3isl_A           91 IPIYGRFGYLLTEIAERYGANVHMLECEWG--TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRTE  165 (416)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHHT
T ss_pred             EecCCcccHHHHHHHHhcCCeeEEEecCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHHc
Confidence            99999998  67788889999999997643  4689999999987 58899999999999999977   78899999999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------  287 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------  287 (421)
                      |+++|+|++|+...    ....+...   +..+++.|+||+++ ++.++|+++++        +++.+.+...       
T Consensus       166 ~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~l~-g~~g~g~~~~~--------~~~~~~~~~~~~~~~Gw  229 (416)
T 3isl_A          166 DALFIVDAVATIGG----CEVKVDEW---KIDAAIGGTQKCLS-VPSGMAPITYN--------ERVADVIAARKKVERGI  229 (416)
T ss_dssp             TCEEEEECTTTTTT----SCCCTTTT---TCSEEECCSSSTTC-CCSSEEEEEEC--------HHHHHHHHTC-------
T ss_pred             CCEEEEECCccccC----CCcchhhc---CCCEEEecCccccC-CCCCeEEEEEC--------HHHHHHhhccccccccc
Confidence            99999999997532    11122222   23488999999732 33458999985        3455555421       


Q ss_pred             --------------------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          288 --------------------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       288 --------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                                                      ....++++...+.++.++++......+++..++++++++++.+.|++.
T Consensus       230 ~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~  309 (416)
T 3isl_A          230 ATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM  309 (416)
T ss_dssp             -----------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence                                            111335677777777777764333347889999999999999999986


Q ss_pred             CCccccCCCCc---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH-HHHHHHH
Q 014631          336 PCITCPRKPEG---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA-LEEGLGR  409 (421)
Q Consensus       336 ~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~-l~~~~~~  409 (421)
                       ++. +..+.+   +.++++.++..     .+..++...|++++||.+.+|.....++++|++++  .++++ +++++++
T Consensus       310 -g~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~  382 (416)
T 3isl_A          310 -GLR-LFGDDSCKMPVVTCVEIPGG-----IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAG  382 (416)
T ss_dssp             -TCC-BCSCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHH
T ss_pred             -CCE-eccCccccCCcEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHH
Confidence             887 334443   45777777532     24677877776666999999886556789999994  45555 9999999


Q ss_pred             HHHHHHHhh
Q 014631          410 IKAFCQRHA  418 (421)
Q Consensus       410 l~~~~~~~~  418 (421)
                      |+++++++.
T Consensus       383 l~~~~~~~~  391 (416)
T 3isl_A          383 LEAVLLRHN  391 (416)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHcC
Confidence            999998764

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=2.1e-33  Score=267.92  Aligned_cols=333  Identities=13%  Similarity=0.143  Sum_probs=233.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .+..++||+.+......+ +.++.+.+++.+++.....  +.. ....++++.+++.+.+.+|    ++++++|+|+++|
T Consensus        38 ~g~~~ld~~~~~~~~~lg-~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a  109 (397)
T 2ord_A           38 KGNAYLDFTSGIAVNVLG-HSHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEA  109 (397)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHH
T ss_pred             CCCEEEECCccccccccC-CCCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            367889998773221222 3678999999999876321  111 1112444455555544443    5799999999999


Q ss_pred             HHHHHHHhcC------CC-CeEEEcCCCCcchHH-HHhhcCce------------eEeeeccCCCCccCCHHHHHhhhcc
Q 014631          122 IQVILTVLAR------PG-ANILLPKPGFPLYEA-NARHTRLE------------IRHFDLLPEKGWEVDLDGLEALADE  181 (421)
Q Consensus       122 l~~~~~~l~~------~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~e~l~~~~~~  181 (421)
                      +..+++++..      +| +.|++.+|+|++... .+...|.+            +..++.       .|++++++.+++
T Consensus       110 ~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~  182 (397)
T 2ord_A          110 NEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE  182 (397)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT
T ss_pred             HHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc
Confidence            9999988753      54 789999999977544 66666665            444443       289999999988


Q ss_pred             CceEEEEeCCCCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC
Q 014631          182 NTVAMVIVNPGNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG  260 (421)
Q Consensus       182 ~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  260 (421)
                      +++++++++|+||||. +++.+++++|+++|++||+++|+||+|+++.+.|.. .++..++...+++   ||||.++ +|
T Consensus       183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G  257 (397)
T 2ord_A          183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GG  257 (397)
T ss_dssp             TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TT
T ss_pred             CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CC
Confidence            8999999999999999 899999999999999999999999999987665542 2222333222233   7899987 89


Q ss_pred             ceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC-Cc
Q 014631          261 WRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP-CI  338 (421)
Q Consensus       261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~  338 (421)
                      +|+||+++++.        +. .+.... ..+.+++++.+.++.++|+...+   ++..++++++++++.+.|++++ ++
T Consensus       258 ~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~  325 (397)
T 2ord_A          258 VPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEY  325 (397)
T ss_dssp             SCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998642        33 333211 22346788888888888865222   3566777788888888887541 12


Q ss_pred             ccc-CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          339 TCP-RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       339 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      ..+ ..+..|.++|+.++..     .+..++...+ .++||.+.||.    ++++|++++  .+++++++++++|+++++
T Consensus       326 ~~~~~~~~~g~~~~~~~~~~-----~~~~~l~~~l-~~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~  395 (397)
T 2ord_A          326 DVVADVRGMGLMIGIQFREE-----VSNREVATKC-FENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQ  395 (397)
T ss_dssp             TTEEEEEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEEeEEEEEEECCh-----HHHHHHHHHH-HHCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence            211 0123456788887632     1356677666 45899999973    578999975  789999999999999876


Q ss_pred             H
Q 014631          416 R  416 (421)
Q Consensus       416 ~  416 (421)
                      +
T Consensus       396 ~  396 (397)
T 2ord_A          396 G  396 (397)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=1.5e-32  Score=264.75  Aligned_cols=356  Identities=13%  Similarity=0.090  Sum_probs=228.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||..+.+....+ ..+|.+++++.+++++.  ..|.+..+..+.++++++++.+.++  .++++|++|+|++++
T Consensus        27 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea  101 (430)
T 3i4j_A           27 AGRRYLDGSSGALVANIG-HGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA  101 (430)
T ss_dssp             TSCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence            478899999875443333 34899999999998763  2343334455677777777776665  456799999999999


Q ss_pred             HHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCc---------------eeEeeeccCC-CCccCCHHHHHh
Q 014631          122 IQVILTVLAR--------PGANILLPKPGFPLYEANARHTRL---------------EIRHFDLLPE-KGWEVDLDGLEA  177 (421)
Q Consensus       122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~~~~~~~-~~~~~d~e~l~~  177 (421)
                      +..+++.+.+        +++.|++.+|+|+++...+...+.               ++..++.+.. .....|++++++
T Consensus       102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~  181 (430)
T 3i4j_A          102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA  181 (430)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence            9999988763        468999999999988765554443               2222222110 001235688888


Q ss_pred             hhcc---CceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEc
Q 014631          178 LADE---NTVAMVIVNP-GN-PCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLG  250 (421)
Q Consensus       178 ~~~~---~~~~i~~~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~  250 (421)
                      .+..   +..++++++| +| ++|. .++.+++++|.++|++||+++|+||+|+++.+.|... .+..+ +...++   .
T Consensus       182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~-~~~~~~~~~~di---~  257 (430)
T 3i4j_A          182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPL-ALSRWSGVTPDI---A  257 (430)
T ss_dssp             HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTTCCCSE---E
T ss_pred             HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhhhhcCCCCcE---E
Confidence            7762   4455666677 56 7886 5678889999999999999999999999987666532 23333 322223   3


Q ss_pred             ccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-----cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHH
Q 014631          251 SMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-----LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRD  323 (421)
Q Consensus       251 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~  323 (421)
                      +|||.++ +| +|+||++++        +++++.+...     ...+.+.+++++.++.++|+... +...++.++..+.
T Consensus       258 t~sK~l~-~G~~r~G~~~~~--------~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~  328 (430)
T 3i4j_A          258 VLGKGLA-AGYAPLAGLLAA--------PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQ  328 (430)
T ss_dssp             EECGGGT-TTSSCCEEEEEC--------HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred             EEccccc-CCccccEEEEEC--------HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence            6899987 49 999999985        4677877753     22345788999999988887422 2344455555555


Q ss_pred             HHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC----CCChHHHHHHHHhhcCeeEEeCCCC--C-CCCeEEEEe
Q 014631          324 TADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG----ISDDMEFALQLAKEESVIVLPGMAV--G-MKNWLRITF  396 (421)
Q Consensus       324 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gv~v~~g~~~--~-~~~~iRi~~  396 (421)
                      .++.+.+.+.++|++..+ .+ .|.|+++.+.......    .....++...+ .++||.+.|+..+  + ..+++|+++
T Consensus       329 ~~~~l~~~~~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~~~~~~~~iRi~~  405 (430)
T 3i4j_A          329 LLAGLQALQARFPQMMQV-RG-TGLLLGVVLGDLATGQAFETPGIASRIGAAA-LKRGLITYPGSGAEPNGRGDHLLLGP  405 (430)
T ss_dssp             HHHHHHHHHHHCTTEEEE-EE-ETTEEEEEEC------------CHHHHHHHH-HHTTEECC-----------CEEEECC
T ss_pred             HHHHHHHHHHhCCCeEEE-EE-EEEEEEEEeccccccCCCccHHHHHHHHHHH-HhCCCEEEecccccCCCCCCEEEEEC
Confidence            555666655566666522 33 3567777775211000    01124566555 5779999997432  1 157899999


Q ss_pred             c--CCHHHHHHHHHHHHHHHHHhh
Q 014631          397 A--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       397 ~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +  .+++++++++++|+++++++.
T Consensus       406 ~~~~t~e~i~~~l~~l~~~l~~~~  429 (430)
T 3i4j_A          406 PLSITAAEVDGLLALLAGALEDVL  429 (430)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHhh
Confidence            8  789999999999999998753

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=100.00  E-value=3.6e-32  Score=257.36  Aligned_cols=331  Identities=12%  Similarity=0.101  Sum_probs=231.0

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV  124 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~  124 (421)
                      ..++|+-|.      .+.++.+.+++.+.+..    .+.+  ...++.+.+.+++.+.+|.+.+.+.+++|+|++++++.
T Consensus        19 ~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~   86 (376)
T 3f0h_A           19 GMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEA   86 (376)
T ss_dssp             SCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHH
T ss_pred             CceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHH
Confidence            445565553      36788888888765422    2221  22345555555555555543323455669999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          125 ILTVLARPGANILLPKPGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       125 ~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ++++++++||+|++++|.|++..  ..+...|.+++.++.+  .++.+|++++++.++++++++++++|+||||.+++  
T Consensus        87 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~--  162 (376)
T 3f0h_A           87 VVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD--  162 (376)
T ss_dssp             HHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC--
T ss_pred             HHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC--
Confidence            99999999999999999887653  3467779999888875  34678999999988888999999999999999988  


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                       +++|.++|++||+++|+|++|+.+...    ..+...+   ..+++.|+||+++ .+|  +|+++++        +++.
T Consensus       163 -l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~---~d~~~~s~~K~l~~~~G--~g~~~~~--------~~~~  224 (376)
T 3f0h_A          163 -TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNECG---ADVMITGSQKVLACPPG--ISVIVLA--------PRGV  224 (376)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHT---CSEEEEETTTTTCCCSS--CEEEEEC--------HHHH
T ss_pred             -HHHHHHHHHHcCCEEEEEcCccccCcc----ccccccC---ccEEEecCcccccCCCc--eEEEEEC--------HHHH
Confidence             899999999999999999999874321    1222222   2377889999987 556  6777775        3566


Q ss_pred             HHHhhhcc------------------cccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          282 DSIKGYLN------------------ISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       282 ~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                      +.+.....                  ...+++...+.++.++++...+. ++++..++++++++++.+.|+++ ++.+. 
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-  302 (376)
T 3f0h_A          225 ERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELV-  302 (376)
T ss_dssp             HHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEEC-
T ss_pred             HHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence            65553211                  12244444445555555532233 57888999999999999999987 66632 


Q ss_pred             CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          343 KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                      .+.....++...+..     .+..++...+.+++||.+.+|.....++++|++++  ++++++++++++|++++++
T Consensus       303 ~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~  373 (376)
T 3f0h_A          303 SESPANGVTSVHPTT-----ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR  373 (376)
T ss_dssp             CSSBBTTEEEEEESS-----SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             ccccCceEEEEeCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            333232222212211     24667777776555999999865445789999996  6899999999999998864

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=100.00  E-value=2.9e-32  Score=263.87  Aligned_cols=357  Identities=15%  Similarity=0.109  Sum_probs=238.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||..|.+....+ ..+|.+.+++.+++.+.  ..|....+..+.+..+++++.+.++.. .+++|++|+||++|
T Consensus        62 ~G~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA  137 (453)
T 4ffc_A           62 DGNSFIDLGAGIAVTTVG-ASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEA  137 (453)
T ss_dssp             TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHH
T ss_pred             CCCEEEEcCCCcccCcCC-CCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHH
Confidence            367889998875442222 45899999999998874  234444445577777777777665421 35799999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccC--CCCccCC--------HHHH
Q 014631          122 IQVILTVLAR--PGANILLPKPGFPLYEANARHTRL--------------EIRHFDLLP--EKGWEVD--------LDGL  175 (421)
Q Consensus       122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~d--------~e~l  175 (421)
                      ++.+++.+..  .+++|++.+++|+++...+...+.              .+..++.+.  .+.++.+        ++.+
T Consensus       138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l  217 (453)
T 4ffc_A          138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI  217 (453)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence            9999987653  458999999999988665544322              234444321  1222233        4566


Q ss_pred             HhhhccCceEEEEeCCCCCcc--cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccc
Q 014631          176 EALADENTVAMVIVNPGNPCG--NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS  253 (421)
Q Consensus       176 ~~~~~~~~~~i~~~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  253 (421)
                      ++.+.+++.++++++|.|++|  ...+++.+++|.++|++||+++|+||+|+++.+.|... ....++....   +.|||
T Consensus       218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-a~~~~~~~pd---i~t~s  293 (453)
T 4ffc_A          218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF-ASEHEGIVPD---IVTMA  293 (453)
T ss_dssp             HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEEC
T ss_pred             HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc-hhhhcCCCcc---hHhhh
Confidence            666666677788889977776  44577889999999999999999999999887666422 2222222222   34789


Q ss_pred             cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHH
Q 014631          254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       254 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      |.++. |+|+||++++        +++++.+..... .+.+.+++++.++.++|+... +...++.++.....++.+.+.
T Consensus       294 K~~~~-G~~~G~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~  364 (453)
T 4ffc_A          294 KGIAG-GMPLSAVTGR--------AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSAL  364 (453)
T ss_dssp             GGGGT-TSSCEEEEEE--------HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcC-CcCeEEEEEC--------HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            99866 8999999986        457766655432 355788999999988887422 233344444444445555555


Q ss_pred             hhcCCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631          332 IKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~  407 (421)
                      +.++|.+..+  +..|.++|+.+.....  +.......+... +.++||.+.|+..+  .+.+|++++  .+++++++++
T Consensus       365 ~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l  439 (453)
T 4ffc_A          365 AEEVDIIGEV--RGRGAMLAIEIVKPGTLEPDAALTKSIAAE-ALSQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGI  439 (453)
T ss_dssp             HHHCSSEEEE--EEETTEEEEEEBCTTSCCBCHHHHHHHHHH-HHHTTEECCEECTT--SCEEEECCCTTCCHHHHHHHH
T ss_pred             HhhCCCeEEE--EeeceEEEEEEecCcccCCCHHHHHHHHHH-HHhCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHH
Confidence            5556655422  3346688887743100  000013345554 46679999997654  468999876  6899999999


Q ss_pred             HHHHHHHHHhhhc
Q 014631          408 GRIKAFCQRHAKQ  420 (421)
Q Consensus       408 ~~l~~~~~~~~~~  420 (421)
                      ++|+++++++.++
T Consensus       440 ~~l~~~l~~~~~~  452 (453)
T 4ffc_A          440 TALSDIIRAKASH  452 (453)
T ss_dssp             HHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999887654

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=100.00  E-value=3.3e-32  Score=256.96  Aligned_cols=330  Identities=14%  Similarity=0.075  Sum_probs=227.0

Q ss_pred             CC-CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           43 PR-PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        43 ~~-~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      |. +++|++.+.+.    .+.++.+.+++.         .|..   ...+++.+++++.+.+|.. +++++++++|++++
T Consensus        26 g~~~v~~~~~~~~~----~~~~~~v~~a~~---------~~~~---~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a   88 (374)
T 2aeu_A           26 GRDALYDLSGLSGG----FLIDEKDKALLN---------TYIG---SSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA   88 (374)
T ss_dssp             CGGGCEECSSCCCC----CCCCHHHHHHHT---------STTH---HHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred             CccceeeecccCCC----CCCCHHHHHHHH---------HhcC---chHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence            55 78999988754    478899988885         1211   1355566666665555532 35789999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE-EEEeCCCCCccc
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA-MVIVNPGNPCGN  197 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~-i~~~~p~nptG~  197 (421)
                      +..++.++  +||+|+++.|+|+++..   .+...|++++.+         .|++++++. ++++++ +++++|+||||.
T Consensus        89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~  156 (374)
T 2aeu_A           89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI  156 (374)
T ss_dssp             HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred             HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence            99999988  99999999998877543   667789888776         278899888 778899 889999999996


Q ss_pred             ccCHHHHHHHHHHHHhcCcEEEEcccccccccC-CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631          198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG-STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ  276 (421)
Q Consensus       198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  276 (421)
                        +..++++|.++|++||+++|+|++|+.+..+ ......+ ..+   ..++++|+||++  +|+|+||++++       
T Consensus       157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~---~di~~~S~sK~l--~g~~~G~~~~~-------  221 (374)
T 2aeu_A          157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL-KLG---ADLVVTSTDKLM--EGPRGGLLAGK-------  221 (374)
T ss_dssp             --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHH-HHT---CSEEEEETTSSS--SSCSCEEEEEE-------
T ss_pred             --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcc-ccC---CcEEEecCcccc--cCcceEEEEEC-------
Confidence              5689999999999999999999999876310 0000011 122   237889999984  56899999986       


Q ss_pred             HHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH----HHHHHHHhhcC---CCccccCCCCcee
Q 014631          277 ELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT----ADICYDRIKEI---PCITCPRKPEGSM  348 (421)
Q Consensus       277 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~---~g~~~~~~~~~~~  348 (421)
                       +++++.+...... ..+++++.+.++..+++......+++..+..+..    ++.+.+.|..+   +|+.+...|.+.+
T Consensus       222 -~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~  300 (374)
T 2aeu_A          222 -KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV  300 (374)
T ss_dssp             -HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred             -HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence             3577777665432 3357788888888888753222233333223233    45566666554   3555223556555


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEEecC-C--HHHHHHHHHHHHHHHHHhhh
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNWLRITFAI-E--PSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~~~~-~--~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +.|..++....  ..++.+++.++++++||.+.||..|. ..+++||+++. +  +++++++++.|+++++++.+
T Consensus       301 ~~~~~~~~~~~--~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~  373 (374)
T 2aeu_A          301 IKRVYKDDTIN--IKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK  373 (374)
T ss_dssp             EEEEESSHHHH--HHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred             EEeeccccccc--ccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence            55544431100  00112366677788899999998763 35689999973 2  33588999999998887654

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=3.3e-32  Score=261.25  Aligned_cols=339  Identities=14%  Similarity=0.145  Sum_probs=229.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +..++||..|.+....++..++.+++++.++++...  .|++..+..+++..+++.+.+.+|... +++|++|+|+++++
T Consensus        41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~  117 (419)
T 2eo5_A           41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAI  117 (419)
T ss_dssp             SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHH
T ss_pred             CCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHH
Confidence            677899988875432222227999999999987642  232222223444555555555555332 78999999999999


Q ss_pred             HHHHHHhcC-CCCeEEEcCCCCcchHHHHh-hcC-------------ceeEeeeccCC--CCcc------------CCHH
Q 014631          123 QVILTVLAR-PGANILLPKPGFPLYEANAR-HTR-------------LEIRHFDLLPE--KGWE------------VDLD  173 (421)
Q Consensus       123 ~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~~~~~~~--~~~~------------~d~e  173 (421)
                      +.+++.+.. +||+|++.+|+|+++...+. ..|             .+++.++.+..  .+|+            +|++
T Consensus       118 ~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~  197 (419)
T 2eo5_A          118 EASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIE  197 (419)
T ss_dssp             HHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHH
Confidence            999987653 48999999999987644332 111             24556665321  1112            3688


Q ss_pred             HHH-hhhcc----CceEEEEeCCC-CCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631          174 GLE-ALADE----NTVAMVIVNPG-NPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV  246 (421)
Q Consensus       174 ~l~-~~~~~----~~~~i~~~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  246 (421)
                      +++ +.+++    ....+++++|+ ||||. ..+.+++++|.++|++||+++|+||+|+++.+.|... .+...+...++
T Consensus       198 ~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~-~~~~~~~~~d~  276 (419)
T 2eo5_A          198 FIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLF-AIENFNTVPDV  276 (419)
T ss_dssp             HHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE
T ss_pred             HHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchh-hHHhcCCCCCE
Confidence            998 87763    23346677885 67896 5678889999999999999999999999887665422 22222222333


Q ss_pred             EEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 014631          247 ITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA  325 (421)
Q Consensus       247 i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  325 (421)
                      +   ||||.|+ +| +|+||+++++        +++ .+......+.+.+++++.++.++|+.     .++..+++++++
T Consensus       277 ~---t~sK~~~-~G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~-----~~~~~~~~~~~~  338 (419)
T 2eo5_A          277 I---TLAKALG-GGIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDI-----VKDLLPHVNEIG  338 (419)
T ss_dssp             E---EECGGGG-TTTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHH
T ss_pred             E---Eeccccc-CCccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHH
Confidence            3   7999987 49 9999999974        233 33112223457788999999998874     222778888999


Q ss_pred             HHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHH
Q 014631          326 DICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSAL  403 (421)
Q Consensus       326 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l  403 (421)
                      +++.+.|+++  +..+  +..|+|+++++....    .... +...+ .++||.+.|+.    .+++|++++  .+++++
T Consensus       339 ~~l~~~L~~~--~~~~--~~~g~~~~i~~~~~~----~~~~-~~~~l-~~~Gv~v~~~~----~~~lRis~~~~~t~e~i  404 (419)
T 2eo5_A          339 KIFAEELQGL--ADDV--RGIGLAWGLEYNEKK----VRDR-IIGES-FKRGLLLLPAG----RSAIRVIPPLVISEEEA  404 (419)
T ss_dssp             HHHHHHHTTS--SSEE--EEETTEEEEECSCHH----HHHH-HHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHH
T ss_pred             HHHHHHHHHh--hhhe--EeeeEEEEEEEecCc----cHHH-HHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHH
Confidence            9999999876  3312  334667888883110    0133 55555 47899999974    578999876  789999


Q ss_pred             HHHHHHHHHHHHHh
Q 014631          404 EEGLGRIKAFCQRH  417 (421)
Q Consensus       404 ~~~~~~l~~~~~~~  417 (421)
                      ++++++|+++++++
T Consensus       405 ~~~l~~l~~~l~~~  418 (419)
T 2eo5_A          405 KQGLDILKKVIKVV  418 (419)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999998764

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=6.6e-32  Score=260.12  Aligned_cols=341  Identities=14%  Similarity=0.138  Sum_probs=233.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF---DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .+..++|+..+.+....+ +.++.+.+++.++++....   ..|. .....++++.+++++    +  .++++|++|+|+
T Consensus        41 ~g~~ylD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----~--~~~~~v~~~~gg  112 (429)
T 1s0a_A           41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGGIT-HAPAIELCRKLVAMT----P--QPLECVFLADSG  112 (429)
T ss_dssp             TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCSSEE-CHHHHHHHHHHHHHS----C--TTCCEEEEESSH
T ss_pred             CCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcccccccccC-CHHHHHHHHHHHHhC----C--CCCCEEEEeCCH
Confidence            367789998887543333 3689999999999876321   1232 212345666666665    3  568899999999


Q ss_pred             HHHHHHHHHHhc---C----CCCeEEEcCCCCcchHHHHhhc-C-------------ceeEeeeccC---CCCc-cCCHH
Q 014631          119 KQAIQVILTVLA---R----PGANILLPKPGFPLYEANARHT-R-------------LEIRHFDLLP---EKGW-EVDLD  173 (421)
Q Consensus       119 ~~al~~~~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~d~e  173 (421)
                      +++++.+++.+.   +    |||+|++.+|+|+++...+... |             .++..++.+.   ++.+ .+|++
T Consensus       113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  192 (429)
T 1s0a_A          113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV  192 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred             HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence            999999998653   2    6899999999999865433221 1             1234444431   1123 47899


Q ss_pred             HHHhhhcc--CceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          174 GLEALADE--NTVAMVIVNP--GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       174 ~l~~~~~~--~~~~i~~~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      ++++.+++  ....+++++|  +||||. ..+.+++++|+++|++||+++|+||+|+++.+.|... .+...+...+++ 
T Consensus       193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~~~~~~~~~d~~-  270 (429)
T 1s0a_A          193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL-  270 (429)
T ss_dssp             HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE-
T ss_pred             HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-HhhhcCCCCCEE-
Confidence            99998863  2334556677  589996 5577889999999999999999999999876555322 222222222333 


Q ss_pred             EcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh------cccccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          249 LGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       249 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                        ||||.++ +| +|+||++++        +++++.+...      ...+.+++++++.++.++++...+   ++..+++
T Consensus       271 --t~sK~l~-~G~~~iG~~~~~--------~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~  336 (429)
T 1s0a_A          271 --CLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQV  336 (429)
T ss_dssp             --EECGGGG-TSSSCCEEEEEC--------HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHH
T ss_pred             --Eeccccc-CCCccceEEEeC--------HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHH
Confidence              7899976 58 999999985        3566766553      123456788999888888864222   2345667


Q ss_pred             HHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-
Q 014631          322 RDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-  397 (421)
Q Consensus       322 ~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-  397 (421)
                      +++++++.+.|+++   |++. ...+ .|.++|+.++..     .+..++...++ ++||.+.++     .+++|++++ 
T Consensus       337 ~~~~~~l~~~L~~l~~~~~~~-~~~~-~g~~~~~~~~~~-----~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~  403 (429)
T 1s0a_A          337 ADIEVQLREQLAPARDAEMVA-DVRV-LGAIGVVETTHP-----VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPY  403 (429)
T ss_dssp             HHHHHHHHHHHGGGGGCTTEE-EEEE-ETTEEEEEESSC-----BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCT
T ss_pred             HHHHHHHHHHHHHHhcCCCEE-EEEE-eeEEEEEEECCc-----ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCC
Confidence            77888888888764   4544 2123 356888887642     13566776664 679999874     368999976 


Q ss_pred             -CCHHHHHHHHHHHHHHHHHhhh
Q 014631          398 -IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       ++++++++++++|++++++++.
T Consensus       404 ~~t~e~i~~~~~~l~~~~~~~~~  426 (429)
T 1s0a_A          404 IILPQQLQRLTAAVNRAVQDETF  426 (429)
T ss_dssp             TCCHHHHHHHHHHHHHHTSSGGG
T ss_pred             CCCHHHHHHHHHHHHHHHHhhhc
Confidence             7999999999999998876543

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=1.6e-32  Score=261.40  Aligned_cols=327  Identities=17%  Similarity=0.166  Sum_probs=238.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      .+.+++||..+.+....+ ..+|.+.+++.+.+..... ..+.+.....++++.++++++        ++++++++|+++
T Consensus        34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~v~~~~~gt~  104 (392)
T 3ruy_A           34 EGNRYMDLLSAYSAVNQG-HRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--------KEMVLPMNTGAE  104 (392)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--------CSEEEEESSHHH
T ss_pred             CCCEEEEcCCChhhhccC-CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--------CCEEEEeCcHHH
Confidence            377899998875442222 2579999999999876321 111233445688888888762        679999999999


Q ss_pred             HHHHHHHHhcCC----------CCeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHh
Q 014631          121 AIQVILTVLARP----------GANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus       121 al~~~~~~l~~~----------gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      |+..+++.+..+          +|+|++..|+|+++...+...+..             +..++.       .|++++++
T Consensus       105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~  177 (392)
T 3ruy_A          105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA  177 (392)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence            999999877643          689999999998876665444322             222221       27999999


Q ss_pred             hhccCceEEEEeCCCCCcccccCHHH-HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          178 LADENTVAMVIVNPGNPCGNVFTYQQ-LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       178 ~~~~~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      .++++++++++++|+||||.+++.++ +++|.++|++||+++|+||+|+++.+.|... .....+...+++   ||||.+
T Consensus       178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l  253 (392)
T 3ruy_A          178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL  253 (392)
T ss_dssp             HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred             HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence            99888999999999999999996555 9999999999999999999999877666533 222223222333   778985


Q ss_pred             CCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          257 IVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       257 ~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      + +| +|+||++++        +++++.+..... ...+++++.+.++.++++...   .++..++++++++++.+.|++
T Consensus       254 ~-gG~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~l~~~L~~  321 (392)
T 3ruy_A          254 G-GGVFPISCAAAN--------RDILGVFEPGSHGSTFGGNPLACAVSIAALEVLE---EEKLTERSLQLGEKLVGQLKE  321 (392)
T ss_dssp             G-TTTSCCEEEEEC--------HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTT
T ss_pred             h-CChhhhEEEEEC--------HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHH
Confidence            3 46 999999985        356666655432 345788899999888887521   156778889999999999988


Q ss_pred             C--CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631          335 I--PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       335 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      +  +.+. ...+. +.++++.++.       +..++...+ .++||.+.||.    .+++|++++  .+++++++++++|
T Consensus       322 ~~~~~~~-~~~~~-g~~~~~~~~~-------~~~~l~~~l-~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l  387 (392)
T 3ruy_A          322 IDNPMIT-EVRGK-GLFIGIELNE-------PARPYCEQL-KAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKI  387 (392)
T ss_dssp             CCCTTEE-EEEEE-TTEEEEEESS-------CSHHHHHHH-HTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             hcCCCce-EEEee-eeEEEEEEcc-------hHHHHHHHH-HHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHH
Confidence            6  3343 22333 4566666653       356677665 57899999875    589999976  7899999999999


Q ss_pred             HHHH
Q 014631          411 KAFC  414 (421)
Q Consensus       411 ~~~~  414 (421)
                      ++++
T Consensus       388 ~~~l  391 (392)
T 3ruy_A          388 KAVL  391 (392)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9876

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=100.00  E-value=4.9e-32  Score=259.97  Aligned_cols=336  Identities=14%  Similarity=0.142  Sum_probs=234.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||+.|......+ ..++.+.+++.+++++..  .+. .....++++.+++.+.+.+|    .+++++|+|+++|
T Consensus        55 ~g~~~lD~~~~~~~~~lG-~~~p~v~~ai~~~~~~~~--~~~-~~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA  126 (420)
T 2pb2_A           55 QGKEYIDFAGGIAVTALG-HCHPALVEALKSQGETLW--HTS-NVFTNEPALRLGRKLIDATF----AERVLFMNSGTEA  126 (420)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCC--CCC-TTSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred             CCCEEEEccccccccccC-CCCHHHHHHHHHHHHhcc--ccc-CccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence            477889998774221222 367999999999987632  111 11223555556666655544    5799999999999


Q ss_pred             HHHHHHHhcC-------CC-CeEEEcCCCCcchHHH-HhhcCce------------eEeeeccCCCCccCCHHHHHhhhc
Q 014631          122 IQVILTVLAR-------PG-ANILLPKPGFPLYEAN-ARHTRLE------------IRHFDLLPEKGWEVDLDGLEALAD  180 (421)
Q Consensus       122 l~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~d~e~l~~~~~  180 (421)
                      +..+++++..       +| ++|++.+|+|+++... ....|.+            +..++.       .|++++++.++
T Consensus       127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~  199 (420)
T 2pb2_A          127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD  199 (420)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred             HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence            9999998865       77 5999999999887543 3344543            233332       28999999998


Q ss_pred             cCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631          181 ENTVAMVIVNPGNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP  259 (421)
Q Consensus       181 ~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  259 (421)
                      +++++++++.++|++|. .++.+++++|.++|++||+++|+||+|+++.+.|... .+...+...+++   ||||.++ +
T Consensus       200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~  274 (420)
T 2pb2_A          200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G  274 (420)
T ss_dssp             TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred             cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence            88888877777888884 6899999999999999999999999998877666532 122222222333   7899987 8


Q ss_pred             CceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC---
Q 014631          260 GWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI---  335 (421)
Q Consensus       260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---  335 (421)
                      |+|+||+++++        ++++.+.... ..+.+.+++++.++.++|+...+   ++..++++++++++.+.|+++   
T Consensus       275 G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~  343 (420)
T 2pb2_A          275 GFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ  343 (420)
T ss_dssp             TSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999962        4555554421 23347788999988888865322   355667777777777777653   


Q ss_pred             -CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          336 -PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       336 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                       |.+. ...+ .|.++++.++...   ..+..++...+ .++||.+.|+.    ++++|++++  .+++++++++++|++
T Consensus       344 ~~~~~-~~~~-~g~~~~v~~~~~~---~~~~~~l~~~l-~~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~  413 (420)
T 2pb2_A          344 FDIFS-DIRG-MGLLIGAELKPKY---KGRARDFLYAG-AEAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ  413 (420)
T ss_dssp             HCCEE-EEEE-ETTEEEEEECGGG---TTCHHHHHHHH-HHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeE-EEEe-cceEEEEEECCCc---hHHHHHHHHHH-HHCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence             3333 1123 4667888886421   01355666665 45899999974    578999976  799999999999999


Q ss_pred             HHHHhh
Q 014631          413 FCQRHA  418 (421)
Q Consensus       413 ~~~~~~  418 (421)
                      +++++.
T Consensus       414 ~l~~~~  419 (420)
T 2pb2_A          414 AVGKVV  419 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            987753

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=100.00  E-value=9.8e-34  Score=270.40  Aligned_cols=337  Identities=15%  Similarity=0.099  Sum_probs=220.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CC-CCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FD-CYS----PSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~-~y~----~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      ..++|+|+.+.+.     ++++.+.+++.+.+....  .. .|.    ......++++.+++++      ++++++|++|
T Consensus        18 ~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~~   86 (400)
T 3vax_A           18 GSHMTYLDAAATT-----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIFT   86 (400)
T ss_dssp             ----CCCCCCCCS-----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEEE
T ss_pred             cCCcEEecCCCCC-----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEEe
Confidence            4567778777644     678999999999886421  10 111    1122356666666665      3567899999


Q ss_pred             CCHHHHHHHHHHHhc----CCCC-eEEEcCCCCcchHHHHhh---cCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631          116 AGCKQAIQVILTVLA----RPGA-NILLPKPGFPLYEANARH---TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV  187 (421)
Q Consensus       116 ~g~~~al~~~~~~l~----~~gd-~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~  187 (421)
                      +|+++++..+++++.    ++|| +|+++.++|+++...+..   .|++++.++++.  ++.+|++++++.+++++++++
T Consensus        87 ~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~  164 (400)
T 3vax_A           87 SGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVS  164 (400)
T ss_dssp             SCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEE
Confidence            999999999999987    8999 999999999987655543   689999988754  456899999999988999999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +++|+||||.+++   +++|.++|++||+++|+|++|+...    ....+..+    ..+++.|+||.++.+|  +|+++
T Consensus       165 ~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~~  231 (400)
T 3vax_A          165 LMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGALV  231 (400)
T ss_dssp             CCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEEE
T ss_pred             EECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEEE
Confidence            9999999999977   6889999999999999999998522    22222222    2378899999876555  67777


Q ss_pred             -eeCCCcchhHHHHHHHHh----hhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          268 -TSDPSGILQELRIVDSIK----GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       268 -~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                       ++++........+...+.    ......++++...+.++..+++. ...++++..++++++++++.+.|+ .+++.+. 
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~-  308 (400)
T 3vax_A          232 TRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI-FEAEHAQWQVAAQDLRSRLLAGLA-STSFQVN-  308 (400)
T ss_dssp             ECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC-
T ss_pred             EecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe-
Confidence             764210000000001000    00112345667777777677653 234678889999999999999999 7888743 


Q ss_pred             CCCc---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEe-c--
Q 014631          343 KPEG---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITF-A--  397 (421)
Q Consensus       343 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~-~--  397 (421)
                      .+.+   +.++++.++.      .+..++...| . +||.+.+|..|..                   .+++|+++ +  
T Consensus       309 ~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~  380 (400)
T 3vax_A          309 GDQDHVVPHILNLSFED------VDAEAFLVTL-K-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQ  380 (400)
T ss_dssp             SCTTSBCTTEEEEECTT------CCHHHHHHHH-H-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-
T ss_pred             CCcccCCCCEEEEEeCC------CCHHHHHHHH-h-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCC
Confidence            4443   3456666652      1456666665 5 7999998865432                   38999999 6  


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 014631          398 IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~~~  416 (421)
                      .+++++++++++|++++++
T Consensus       381 ~t~e~i~~~~~~l~~~~~~  399 (400)
T 3vax_A          381 ATDLDVEELARGVAKLKPS  399 (400)
T ss_dssp             -------------------
T ss_pred             CCHHHHHHHHHHHHHHhcc
Confidence            6789999999999988754

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.3e-31  Score=255.32  Aligned_cols=335  Identities=13%  Similarity=0.118  Sum_probs=232.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|++++||+.+.+....+ ..+|.+.+++.++++... +.|  ..+..++++.+++++.+..|    ++++++|+|+++|
T Consensus        34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea  105 (395)
T 3nx3_A           34 KAKKYLDFSSGIGVCALG-YNHAKFNAKIKAQVDKLL-HTS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES  105 (395)
T ss_dssp             TCCEEEESSHHHHTCTTC-BSCHHHHHHHHHHHTTCS-CCC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred             CCCEEEECCCcHHhccCC-CCCHHHHHHHHHHHHhcc-ccc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            478899999885442222 368999999999987632 122  11223444555555544433    5799999999999


Q ss_pred             HHHHHHHhc-------CCCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCCccCCHHHHHhhhcc
Q 014631          122 IQVILTVLA-------RPGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKGWEVDLDGLEALADE  181 (421)
Q Consensus       122 l~~~~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~e~l~~~~~~  181 (421)
                      +..+++.+.       .++|+|++.+|+|+++...+...+.             ++..++.       .|++++++.+++
T Consensus       106 ~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~  178 (395)
T 3nx3_A          106 IEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE  178 (395)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT
T ss_pred             HHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC
Confidence            999998775       3479999999999987655444332             2233322       279999999987


Q ss_pred             CceEEEEeCCCCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC
Q 014631          182 NTVAMVIVNPGNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG  260 (421)
Q Consensus       182 ~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  260 (421)
                      +++++++..++|++|.. ++++++++|.++|++||+++|+||+|+++.+.|... .....+....   +.||||.++. |
T Consensus       179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~~d---~~t~sK~~~~-G  253 (395)
T 3nx3_A          179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQILPD---IMTSAKALGC-G  253 (395)
T ss_dssp             TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGTT-T
T ss_pred             CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCCCCC---EEEecccccC-C
Confidence            78877777777777766 678889999999999999999999999876655432 2222222222   3478999875 8


Q ss_pred             ceEEEEEeeCCCcchhHHHH-HHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          261 WRLGWLVTSDPSGILQELRI-VDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       261 ~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      +|+||++++        +++ .+.+..... .+.+.+++++.++.++++... +...++.++..+..++.+.+.+.++|.
T Consensus       254 ~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  325 (395)
T 3nx3_A          254 LSVGAFVIN--------QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDF  325 (395)
T ss_dssp             SCCEEEEEC--------HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CceEEEEEc--------hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999986        356 676765432 345778899998888886422 233444444444455555555555555


Q ss_pred             ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631          338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      +. . .+..|.++++.++..     .+..+++..+ .++||.+.++.    .+++|++++  .+++++++++++|+++++
T Consensus       326 ~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~  393 (395)
T 3nx3_A          326 CK-K-RKGLGFMQGLSLDKS-----VKVAKVIQKC-QENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALK  393 (395)
T ss_dssp             EE-E-EEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             eE-E-EEeEEEEEEEEeCCc-----chHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            44 2 233467888888642     1355666655 56799999874    589999976  799999999999999886


Q ss_pred             H
Q 014631          416 R  416 (421)
Q Consensus       416 ~  416 (421)
                      +
T Consensus       394 ~  394 (395)
T 3nx3_A          394 S  394 (395)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=1.1e-31  Score=252.58  Aligned_cols=327  Identities=12%  Similarity=0.044  Sum_probs=234.3

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV  124 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~  124 (421)
                      +.++|+-|.      .+.++.+.+++.+.+.+.....+.......++.+.+.+++.+.+|.. ++++|++|+|++++++.
T Consensus         4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~   76 (362)
T 3ffr_A            4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER   76 (362)
T ss_dssp             CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred             cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence            346666552      25677888888888776431111122223355556666666656533 56789999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCCc-chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          125 ILTVLARPGANILLPKPGFP-LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       125 ~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      ++.++.++ +.+++..+.|. .+...+...|++++.++.+  .++.+|+|+++  ++++++++++++|+||||.+++   
T Consensus        77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---  148 (362)
T 3ffr_A           77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---  148 (362)
T ss_dssp             HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred             HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence            99999887 44555555554 2345677789999998874  34678999998  6778999999999999999987   


Q ss_pred             HHHHHHHHHhc-CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHH
Q 014631          204 LQKIAEKARKL-GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       204 l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++|.++|++| |+++|+|++|+.+..    ...+..     ..+++.|+||+++ .+|  +|+++++        +++.
T Consensus       149 l~~i~~la~~~p~~~li~D~a~~~~~~----~~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~--------~~~~  209 (362)
T 3ffr_A          149 VEDINTFRDKNKDALIFVDAVSSLPYP----KFDWTK-----IDSVFFSVQKCFGLPAG--LGVWILN--------DRVI  209 (362)
T ss_dssp             HHHHTTSGGGSTTSEEEEECTTTTTSS----CCCTTS-----CSEEEEETTSTTCCCSC--CEEEEEE--------HHHH
T ss_pred             HHHHHHHHHhCCCCEEEEecccccCCc----ccChhH-----CcEEEEecccccCCCCc--eEEEEEC--------HHHH
Confidence            77788999999 999999999986431    111211     2377899999988 677  5777775        2444


Q ss_pred             HHHhhhcc----------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          282 DSIKGYLN----------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       282 ~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      +.+.....                      ...+++...+.++..+++......++++.++++++++++.+.|+++||+.
T Consensus       210 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~  289 (362)
T 3ffr_A          210 EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS  289 (362)
T ss_dssp             HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred             HHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence            44443221                      13466777777777777643334478889999999999999999998988


Q ss_pred             ccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          340 CPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       340 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      +. .+    ..+.++|+.++.       +..++...| .++||.+.+|..+...+++|++++  ++++++++++++|+++
T Consensus       290 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~  360 (362)
T 3ffr_A          290 FG-VEDAKLRSMTTIVANTTM-------LPGEINKIL-EPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK  360 (362)
T ss_dssp             ES-SSCGGGBCSSEEEEEESS-------CHHHHHHHH-GGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             ec-cCChhhcCCceEEEecCC-------CHHHHHHHH-HHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            43 32    234567777753       366777766 455999999977666789999997  6899999999999876


Q ss_pred             H
Q 014631          414 C  414 (421)
Q Consensus       414 ~  414 (421)
                      +
T Consensus       361 ~  361 (362)
T 3ffr_A          361 I  361 (362)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=100.00  E-value=1.7e-31  Score=259.27  Aligned_cols=357  Identities=12%  Similarity=-0.001  Sum_probs=240.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|++++||..|...... ...+|.+.+++.+++.+.. ..|....+..++++.+++++.+..+  .+.++|++|+|+++|
T Consensus        49 ~G~~~lD~~~~~~~~~l-G~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA  124 (460)
T 3gju_A           49 NGRKSIDAFAGLYCVNV-GYGRQKIADAIATQAKNLA-YYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDA  124 (460)
T ss_dssp             TCCEEEETTHHHHTCTT-CBCCHHHHHHHHHHHHHHS-CCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCcchhhccC-CCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHH
Confidence            47889999988433222 2467999999999987632 1343334445677777777766543  457899999999999


Q ss_pred             HHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccC---CCCccCC------
Q 014631          122 IQVILTVLAR--------PGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLP---EKGWEVD------  171 (421)
Q Consensus       122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~d------  171 (421)
                      +..+++.+.+        ++++|++.+++|+++...+...+.             .+..++.+.   .++++.+      
T Consensus       125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~  204 (460)
T 3gju_A          125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ  204 (460)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence            9999998864        458999999999988655544322             233343221   0112233      


Q ss_pred             --HHHHHhhhcc---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          172 --LDGLEALADE---NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       172 --~e~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                        +++|++.+..   +..++++++| +|++|. +++.+.+++|.++|++||+++|+||+|+++.+.|... ....++...
T Consensus       205 ~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~p  283 (460)
T 3gju_A          205 HCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIKP  283 (460)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCC
Confidence              5788887752   3334455555 667776 6788889999999999999999999999887666432 222233222


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------c-ccccCCchHHHHHHHHHhhccc-hhHHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------L-NISSGPATFVQGAVPQIFKNTK-EDFFS  315 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~  315 (421)
                      ++   .+|||+++.+++|+||++++        +++++.+...       . ..+.+.+++++.++.++|+... +...+
T Consensus       284 di---~t~sK~l~gG~~~lg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~  352 (460)
T 3gju_A          284 DL---ITIAKGLTSAYAPLSGVIVA--------DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVT  352 (460)
T ss_dssp             SE---EEECGGGTTTSSCCEEEEEE--------HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred             Ce---eeeehhhcCCCCCeEEEEEC--------HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence            23   37899975433899999996        4677777421       2 2345788999999998887432 34456


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc--C----CCChHHHHHHHHhhcCeeEEeCCCCCCC
Q 014631          316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE--G----ISDDMEFALQLAKEESVIVLPGMAVGMK  389 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~ll~~~gv~v~~g~~~~~~  389 (421)
                      +.++..+..++.+.+.++++|.+..+ .+ .|.++++.+......  .    .....++... +.++||.+.|+.   ..
T Consensus       353 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~---~~  426 (460)
T 3gju_A          353 NAGETGAYFRAELAKAVGGHKNVGEV-RG-DGMLAAVEFVADKDDRVFFDASQKIGPQVATA-LAASGVIGRAMP---QG  426 (460)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSTTEEEE-EE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH-HHHTTEECEECS---SS
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEE-ee-eeEEEEEEEccCccccccccchHHHHHHHHHH-HHHCCeEEecCC---CC
Confidence            66666666677777777777665522 33 355777776532100  0    0013345554 456799999975   35


Q ss_pred             CeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          390 NWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       390 ~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      +++|++++  .+++++++++++|++++++..++
T Consensus       427 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~  459 (460)
T 3gju_A          427 DILGFAPPLCLTREQADIVVSKTADAVKSVFAN  459 (460)
T ss_dssp             CEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            89999965  79999999999999999887654

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=100.00  E-value=9.2e-32  Score=259.88  Aligned_cols=352  Identities=14%  Similarity=0.063  Sum_probs=233.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~  120 (421)
                      .|..++||+.|.+....+ ..+|.+.+++.+++.+.  ..|....+..++++.+++++.+.++.  .. +++++|+|+++
T Consensus        41 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggse  115 (439)
T 3dxv_A           41 NGRELIDLSGAWGAASLG-YGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSD  115 (439)
T ss_dssp             TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHH
T ss_pred             CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHH
Confidence            478899999998754333 27899999999998874  24544455667888888888776653  34 69999999999


Q ss_pred             HHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCcee---------------EeeeccCCCCccC----CHHHHHhhh
Q 014631          121 AIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEI---------------RHFDLLPEKGWEV----DLDGLEALA  179 (421)
Q Consensus       121 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~---------------~~~~~~~~~~~~~----d~e~l~~~~  179 (421)
                      ++..+++.+  ..+++.|++.++.|+++...+...+...               ..++.+. .....    |++++++.+
T Consensus       116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l  194 (439)
T 3dxv_A          116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP-YRNDPTGDAILTLLTEKL  194 (439)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC-BTTBTTSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc-ccccccHHHHHHHHHHHH
Confidence            999999885  2356789999999988765554443221               2233211 01011    689999988


Q ss_pred             ----ccCceEEEEeCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          180 ----DENTVAMVIVNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       180 ----~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                          .++++++++..++|++|.+. +.+.+++|.++|++||+++|+||+|+++.+.|... ....++...+++   ||||
T Consensus       195 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~-~~~~~~~~~di~---s~sK  270 (439)
T 3dxv_A          195 AAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLH-CFEHEGFVPDIL---VLGK  270 (439)
T ss_dssp             HTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSS-GGGGTTCCCSEE---EECG
T ss_pred             HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhcCCCCCEE---EEcc
Confidence                34556666666677888765 45559999999999999999999999876655422 222333222333   8999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l  332 (421)
                      .|+ +|+|+||++++        +++++.+.... ..+. .+++++.++.++++... +...++.++..+..++.+.+.+
T Consensus       271 ~~~-~G~riG~~~~~--------~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~  340 (439)
T 3dxv_A          271 GLG-GGLPLSAVIAP--------AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELA  340 (439)
T ss_dssp             GGG-TTSCCEEEEEE--------HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhc-CCcceEEEEEC--------HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            987 59999999996        35666665543 2344 78888888888876422 2223333333333334444444


Q ss_pred             hcCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631          333 KEIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~  407 (421)
                      .+++.+. . .+..|.++++.+.....   +......++...+ .++||.+.|+..+  ++++|++++  .+++++++++
T Consensus       341 ~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l  415 (439)
T 3dxv_A          341 KRHPLIG-D-IRGRGLACGMELVCDRQSREPARAETAKLIYRA-YQLGLVVYYVGMN--GNVLEFTPPLTITETDIHKAL  415 (439)
T ss_dssp             HHCTTEE-E-EEEETTEEEEEEEEETTTTEECHHHHHHHHHHH-HHHTEECEEESTT--SCEEEECCCTTCCHHHHHHHH
T ss_pred             HhCCCeE-E-EEEEEEEEEEEEecCccccCCCHHHHHHHHHHH-HHCCcEEeecCCC--CCEEEEECCCCCCHHHHHHHH
Confidence            3455444 2 23446677777632100   0001234566655 4569999998532  478999876  7899999999


Q ss_pred             HHHHHHHHHhh
Q 014631          408 GRIKAFCQRHA  418 (421)
Q Consensus       408 ~~l~~~~~~~~  418 (421)
                      ++|+++++++.
T Consensus       416 ~~l~~~l~~~~  426 (439)
T 3dxv_A          416 DLLDRAFSELS  426 (439)
T ss_dssp             HHHHHHHHTGG
T ss_pred             HHHHHHHHHHh
Confidence            99999998763

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=100.00  E-value=8.2e-32  Score=257.66  Aligned_cols=339  Identities=14%  Similarity=0.094  Sum_probs=237.4

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CCHH--HHHH-HHHHHhhhCCCCCCCCcEEEcCC
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSV---GILP--ARRA-IADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~~~--l~~~-ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      .++++|..|.+.      .++.+.+++.+.+.+.....|+...   |.+.  +.+. ..+++.+.+|  .++++|++++|
T Consensus        23 ~~~i~~~~~~~~------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g--~~~~~i~~~sG   94 (407)
T 2dkj_A           23 REGLELIASENF------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG--AAWANVQPHSG   94 (407)
T ss_dssp             HTSEECCTTCCC------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH
T ss_pred             hcceeeccCCCC------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhC--CCcceEEecch
Confidence            578999988743      3799999999988642234555332   4443  3332 1123333333  44555656665


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccCC-CCccCCHHHHHhhhcc-CceEEEEeCCC
Q 014631          118 CKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPE-KGWEVDLDGLEALADE-NTVAMVIVNPG  192 (421)
Q Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~~~~-~~~~i~~~~p~  192 (421)
                       ++++..+++++.++||+|++++|+|+++.   ..+...|.++..++.+.+ +++.+|++++++.+++ +++++++++|+
T Consensus        95 -t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~  173 (407)
T 2dkj_A           95 -SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASA  173 (407)
T ss_dssp             -HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSS
T ss_pred             -HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccc
Confidence             56999999999999999999999998873   445555664444444322 3567999999998874 78888888999


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      ||  ...+   +++|.++|++||+++|+||+|+. +.+.+.....+   +  ...+++.|+||+  ++|.|+||+++++ 
T Consensus       174 ~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~~~~~-  240 (407)
T 2dkj_A          174 YP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLILSND-  240 (407)
T ss_dssp             CC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEEEESC-
T ss_pred             cC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEEEECC-
Confidence            97  4433   89999999999999999999988 44444322111   1  135889999996  4588899999863 


Q ss_pred             CcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631          272 SGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF  349 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~  349 (421)
                            +++.+.+.....  ..++++.....++.++++.....++++..++++++++++.+.|+++ |+.+...+..+++
T Consensus       241 ------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~  313 (407)
T 2dkj_A          241 ------PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHL  313 (407)
T ss_dssp             ------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred             ------HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceE
Confidence                  346666655432  2234555445466666654334677888999999999999999988 7774322457888


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC------CCCCeEEEEec------CCHHHHHHHHHHHHHHHHH
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV------GMKNWLRITFA------IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~------~~~~~iRi~~~------~~~e~l~~~~~~l~~~~~~  416 (421)
                      +|+.++...    .+..++... +.++||.+.+|..+      ..++++|++++      .+++++++++++|++++++
T Consensus       314 ~~~~~~~~~----~~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~  387 (407)
T 2dkj_A          314 FLVDLRPKG----LTGKEAEER-LDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE  387 (407)
T ss_dssp             EEEECGGGT----CCHHHHHHH-HHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred             EEEECcccC----CCHHHHHHH-HHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence            999886421    134556555 47789999998753      22578999996      6899999999999999877

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=100.00  E-value=3.1e-32  Score=254.98  Aligned_cols=328  Identities=16%  Similarity=0.160  Sum_probs=224.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ...+|+|+.+...     .+++.+++++.+....  ...|++..+..+||++++++++      .  +++++++||++++
T Consensus         2 ~~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g------~--~~~~~~~~gt~a~   66 (347)
T 1jg8_A            2 PHMMIDLRSDTVT-----KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG------K--EAALFVPSGTMGN   66 (347)
T ss_dssp             ---CEECSCGGGC-----CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHH
T ss_pred             CceEEEeccccCC-----CCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC------C--ceEEEecCcHHHH
Confidence            3567899988744     3557788887654322  1357777778899999999984      2  4678888889999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGN  193 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~n  193 (421)
                      .+++.++.++||+|++++|+|.+..   ..+...|++++.+ .+  .++.+|++++++.+++      +++++++++|+|
T Consensus        67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n  143 (347)
T 1jg8_A           67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN  143 (347)
T ss_dssp             HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred             HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence            9999999999999999999997543   2567789888877 32  2455899999998875      578899999999


Q ss_pred             Cc-ccccCHHHHHHHHHHHHhcCcEEEEcccccccc--cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          194 PC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT--FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       194 pt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      || |.++|.+++++|+++|++||+++|+|++|..+.  +.+.....+..  ..+  .++.|+||+++++   +|++++.+
T Consensus       144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~d--~~~~s~sK~l~~~---~G~~~~~~  216 (347)
T 1jg8_A          144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG--YAD--SVMFCLSKGLCAP---VGSVVVGD  216 (347)
T ss_dssp             TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH--TCS--EEEEESSSTTCCS---SCEEEEEC
T ss_pred             ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc--ccc--EEEEecccccCCC---ceEEEEcC
Confidence            99 999999999999999999999999999875321  11222212111  112  3345899997643   57544322


Q ss_pred             CCcchhHHHHHHHHhhhcccc---cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631          271 PSGILQELRIVDSIKGYLNIS---SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS  347 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~  347 (421)
                             +++++.+.......   ...+...+.++...++... ..+.    +..++++.+.+.|+++ ++.+...+..+
T Consensus       217 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~----~~~~~~~~l~~~L~~~-~~~~~~~~~~~  283 (347)
T 1jg8_A          217 -------RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DRLK----EDHENARFLALKLKEI-GYSVNPEDVKT  283 (347)
T ss_dssp             -------HHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TTHH----HHHHHHHHHHHHHHHH-TCBCCGGGCCS
T ss_pred             -------HHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HHHH----HHHHHHHHHHHHHHhc-CceeccCCCcc
Confidence                   34555554433211   1233444555545554321 1222    2234567777788776 66522234556


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      .++|+.++...    .+..+++..| .++||.+.++.    .+++|++++  .+++++++++++|+++++++
T Consensus       284 ~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~  346 (347)
T 1jg8_A          284 NMVILRTDNLK----VNAHGFIEAL-RNSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  346 (347)
T ss_dssp             SEEEEECTTSS----SCHHHHHHHH-HHHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEccccc----CCHHHHHHHH-HHCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence            78888886311    1466777776 56799999853    468999986  68999999999999998654

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=100.00  E-value=6.9e-32  Score=261.65  Aligned_cols=351  Identities=13%  Similarity=0.092  Sum_probs=230.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|++++||..|.+....+ ..+|.+.+++.+++.+...   .+..+..+.+..+++++.+.++  ...+ |++|+|+++|
T Consensus        47 ~g~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA  119 (452)
T 3n5m_A           47 QGKRYLDGMSGLWCVNSG-YGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEA  119 (452)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHH
T ss_pred             CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHH
Confidence            478899999885443333 4689999999999876321   2222334555566666555444  3344 9999999999


Q ss_pred             HHHHHHHhc-----C---CCCeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCC--cc--------C
Q 014631          122 IQVILTVLA-----R---PGANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKG--WE--------V  170 (421)
Q Consensus       122 l~~~~~~l~-----~---~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~--~~--------~  170 (421)
                      +..+++.+.     .   ++++|++.+|+|+++...+...+..             ...++......  ++        .
T Consensus       120 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (452)
T 3n5m_A          120 NETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVE  199 (452)
T ss_dssp             HHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHH
Confidence            999999886     4   7799999999999886655544332             22222111000  00        0


Q ss_pred             CHHHHHhhhc----cCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          171 DLDGLEALAD----ENTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       171 d~e~l~~~~~----~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                      ++++|++.+.    ++++++++..+ +| ||.++ +.+.+++|.++|++||+++|+||+|+++.+.|... ....++...
T Consensus       200 ~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~~  277 (452)
T 3n5m_A          200 CVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVKP  277 (452)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCCC
Confidence            1788988876    44555655555 79 99766 77889999999999999999999999987666532 222333222


Q ss_pred             CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhh---h----cccccCCchHHHHHHHHHhhccc-hhHHH
Q 014631          245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKG---Y----LNISSGPATFVQGAVPQIFKNTK-EDFFS  315 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~  315 (421)
                      +   +.+|||.++. | +|+||++++        +++++.+..   .    ...+.+.+++++.++.++|+... +...+
T Consensus       278 d---i~t~sK~l~~-G~~~ig~~~~~--------~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~  345 (452)
T 3n5m_A          278 D---IITMAKGITS-AYLPLSATAVK--------REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIE  345 (452)
T ss_dssp             S---EEEECGGGGT-TSSCCEEEEEE--------HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred             C---EEeecccccC-CCcceEEEEEC--------HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence            2   3378999866 8 999999996        467777743   1    12345788999999988887432 23334


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC--C--CChHHHHHHHHhhcCeeEEeCCCCCC--C
Q 014631          316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG--I--SDDMEFALQLAKEESVIVLPGMAVGM--K  389 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~ll~~~gv~v~~g~~~~~--~  389 (421)
                      +.++..+..++.+.+.+.++|.+..+ .+ .|.++++.+.......  .  ....++... +.++||.+.|+..|..  .
T Consensus       346 ~~~~~~~~l~~~L~~~~~~~~~~~~~-~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~~~~~~~~~  422 (452)
T 3n5m_A          346 RSAQMGSLLLEQLKEEIGEHPLVGDI-RG-KGLLVGIELVNDKETKEPIDNDKIASVVNA-CKEKGLIIGRNGMTTAGYN  422 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEE-EE-SSSCEEEEEEEETTTTEECCHHHHHHHHHH-HHHTTEECEECTTSSTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEE-EE-EEEEEEEEEecCCcccCCCCHHHHHHHHHH-HHHCCcEEeecCcccCCCC
Confidence            44444444455555555556555422 33 3556677664321000  0  001345554 4567999999876533  5


Q ss_pred             CeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          390 NWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       390 ~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                      +++|++++  .+++++++++++|++++++
T Consensus       423 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          423 NILTLAPPLVISSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             CEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            78999876  7999999999999998764

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=100.00  E-value=1e-31  Score=259.05  Aligned_cols=350  Identities=14%  Similarity=0.091  Sum_probs=230.3

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +..++||..+.+....+ ..+|.+.+++.+++.....  + ...+..+++..+++.+.+.++  .++++|++|+|+++|+
T Consensus        42 g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~  115 (433)
T 1zod_A           42 GRAILDFTSGQMSAVLG-HCHPEIVSVIGEYAGKLDH--L-FSEMLSRPVVDLATRLANITP--PGLDRALLLSTGAESN  115 (433)
T ss_dssp             CCEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCCC--C-CTTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHHH
T ss_pred             CCEEEEcccchhccccC-CCCHHHHHHHHHHHHhCcc--c-ccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHH
Confidence            67788987776433233 3689999999999876321  1 112223445555555555554  4578999999999999


Q ss_pred             HHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcC------------ceeEeeeccC--CCCc--------cCCHHHHHhh
Q 014631          123 QVILTVLA--RPGANILLPKPGFPLYEANARHTR------------LEIRHFDLLP--EKGW--------EVDLDGLEAL  178 (421)
Q Consensus       123 ~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~--~~~~--------~~d~e~l~~~  178 (421)
                      ..+++.+.  ..+++|++.+|+|+++...+....            ..+..++.+.  ...+        .+|++++++.
T Consensus       116 ~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~  195 (433)
T 1zod_A          116 EAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDL  195 (433)
T ss_dssp             HHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHH
Confidence            99998653  235799999999998755433221            1233333321  1112        2468999988


Q ss_pred             hcc---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccc
Q 014631          179 ADE---NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS  253 (421)
Q Consensus       179 ~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  253 (421)
                      +++   +...+++++| +||||. ..+.+++++|.++|++||+++|+||+|+++.+.|... .+...+...+   +.|||
T Consensus       196 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~-~~~~~~~~~d---i~s~s  271 (433)
T 1zod_A          196 IDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPD---ILTLS  271 (433)
T ss_dssp             HHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEEC
T ss_pred             HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHh-HHhhcCCCCC---EEEec
Confidence            863   3334566778 588996 5678899999999999999999999999876655421 1122222222   33899


Q ss_pred             cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-c--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 014631          254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-N--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD  330 (421)
Q Consensus       254 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  330 (421)
                      |.|+. |+|+||++++        +++++.+.... .  .+.+.+++++.++.++++...+   ++..++++++++++.+
T Consensus       272 K~~~~-G~~ig~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~  339 (433)
T 1zod_A          272 KTLGA-GLPLAAIVTS--------AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRR  339 (433)
T ss_dssp             HHHHT-TSSCEEEEEC--------HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred             ccccC-CCCeeEEEEh--------HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHH
Confidence            99875 9999999996        35667665532 1  3456788899888888864222   1234555566666666


Q ss_pred             Hhhc----CCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHH
Q 014631          331 RIKE----IPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPS  401 (421)
Q Consensus       331 ~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e  401 (421)
                      .|++    +|.+. . .+..|.|+|+.++....   +......++...+ .++||.+.||..|+.++++|++++  .+++
T Consensus       340 ~l~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~  416 (433)
T 1zod_A          340 GLLDLMERFDCIG-D-VRGRGLLLGVEIVKDRRTKEPADGLGAKITREC-MNLGLSMNIVQLPGMGGVFRIAPPLTVSED  416 (433)
T ss_dssp             HHHHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHH-HHTTEECCEECCTTSCCEEEECCCTTCCHH
T ss_pred             HHHHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCChHHHHHHHHHH-HHCCCeEeccCCCCCCCEEEEECCcCCCHH
Confidence            6654    34433 2 23346677888753210   0001245566665 478999999987765589999875  7899


Q ss_pred             HHHHHHHHHHHHHHHh
Q 014631          402 ALEEGLGRIKAFCQRH  417 (421)
Q Consensus       402 ~l~~~~~~l~~~~~~~  417 (421)
                      ++++++++|+++++++
T Consensus       417 ~i~~~l~~l~~~l~~~  432 (433)
T 1zod_A          417 EIDLGLSLLGQAIERA  432 (433)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998764

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=100.00  E-value=4.1e-31  Score=251.21  Aligned_cols=314  Identities=12%  Similarity=0.137  Sum_probs=228.5

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCC
Q 014631           64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPG  142 (421)
Q Consensus        64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~  142 (421)
                      +.+.+++.+.+..+. ..|.+..+..++|+.++++++      . ++.|++++| +++++.++.++ .++||+|+++.|+
T Consensus        17 ~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~   87 (388)
T 1b9h_A           17 DAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHHG------A-AHALAVTNG-THALELALQVMGVGPGTEVIVPAFT   87 (388)
T ss_dssp             HHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHTT------C-SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred             HHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHhC------C-CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCc
Confidence            899999999998743 256667778999999999984      2 256666665 89999999999 8999999999999


Q ss_pred             CcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcc
Q 014631          143 FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE  222 (421)
Q Consensus       143 y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  222 (421)
                      |+++...+...|++++.++++++ ++.+|++++++.+++++++|+   |+||||.+.   ++++|.++|++||+++|+|+
T Consensus        88 ~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~---~l~~i~~la~~~~~~li~D~  160 (388)
T 1b9h_A           88 FISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMA---DMDALAKISADTGVPLLQDA  160 (388)
T ss_dssp             CTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHHTCCBCEEC
T ss_pred             cHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcC---CHHHHHHHHHHcCCEEEEec
Confidence            99999999999999999998643 467999999999987777665   999999995   47889999999999999999


Q ss_pred             cccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH--HHHHhhhcc----------
Q 014631          223 VYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI--VDSIKGYLN----------  289 (421)
Q Consensus       223 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~----------  289 (421)
                      +|+.+. +.+.   .+..++    .+.+.||||.++++|.|+||+++++..       +  .+.+.....          
T Consensus       161 a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  226 (388)
T 1b9h_A          161 AHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDGE-------TEKYETAFLRHSCGRPRDDRRY  226 (388)
T ss_dssp             TTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTTC-------HHHHHHHHHHTBTTCCTTCSSC
T ss_pred             chhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCHH-------HHHHHHHHHHHhCCCCccCccc
Confidence            998632 3222   222222    377889997666777799999986532       2  233322111          


Q ss_pred             ------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC-----CCceeEEEEecCccc
Q 014631          290 ------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK-----PEGSMFVMVKLNLSL  358 (421)
Q Consensus       290 ------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-----~~~~~~~~~~~~~~~  358 (421)
                            .....+.+...++...+     .++++..++++++++++.+.|+++|++.+...     +.+++++|+.++...
T Consensus       227 ~~~~~g~~~~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (388)
T 1b9h_A          227 FHKIAGSNMRLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT  301 (388)
T ss_dssp             CCCSCCCBCBCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC
T ss_pred             eeecccccCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC
Confidence                  00113333333332222     34666778888899999999999888873321     345788999886310


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----------------------------CCeEEEEec--C-CHHHHHHH
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAVGM-----------------------------KNWLRITFA--I-EPSALEEG  406 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----------------------------~~~iRi~~~--~-~~e~l~~~  406 (421)
                         ..+..++...| .++||.+.++.....                             ...+|++++  + +++|++++
T Consensus       302 ---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~  377 (388)
T 1b9h_A          302 ---EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHAT  377 (388)
T ss_dssp             ---HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHH
T ss_pred             ---cccHHHHHHHH-HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHH
Confidence               00234566655 567999998754210                             135899997  6 89999999


Q ss_pred             HHHHHHHHHH
Q 014631          407 LGRIKAFCQR  416 (421)
Q Consensus       407 ~~~l~~~~~~  416 (421)
                      ++.|++++++
T Consensus       378 ~~~l~~~~~~  387 (388)
T 1b9h_A          378 AEIIADAVAR  387 (388)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            9999998764

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=6.1e-32  Score=257.57  Aligned_cols=336  Identities=17%  Similarity=0.156  Sum_probs=231.5

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      +..++||+.|.+....+ +.++.+.+++.+.+.....  ..| +.....++++.+++++    +  .++++|++|+|+++
T Consensus        44 g~~~ld~~~~~~~~~~g-~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~~~gg~~  115 (395)
T 1vef_A           44 GNEYIDCVGGYGVANLG-HGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL----P--PELNRVFPVNSGTE  115 (395)
T ss_dssp             SCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEEESSHHH
T ss_pred             CCEEEEccCccccccCC-CCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc----C--CCcCEEEEcCcHHH
Confidence            56788988875432211 3789999999999876321  123 2223345555555554    3  46789999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchH-HHHhhcCceeEe---eeccCCCC--ccCCHHHHHhhhccCceEEEEeCCC
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYE-ANARHTRLEIRH---FDLLPEKG--WEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~---~~~~~~~~--~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      ++..+++++.  .+||.|++.+|+|++.. ..+...|.+...   .|+..+..  ...|++++++.+++++++++++.++
T Consensus       116 a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~  195 (395)
T 1vef_A          116 ANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQ  195 (395)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEE
T ss_pred             HHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCcc
Confidence            9999998764  57899999999997654 455556665221   11111100  0148999999998777777655557


Q ss_pred             CCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          193 NPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       193 nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      ||||.++ +.+++++|.++|++||+++|+||+|+++.+.|... ++...+...+++   ||||+++. |+|+||+++++ 
T Consensus       196 ~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~-  269 (395)
T 1vef_A          196 GEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMRE-  269 (395)
T ss_dssp             TTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEEH-
T ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEehH-
Confidence            8999875 67889999999999999999999999765444322 112222222233   88999876 89999999963 


Q ss_pred             CcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCceeE
Q 014631          272 SGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP-RKPEGSMF  349 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~  349 (421)
                             ++++.+.... ..+.+++++.+.++.++++....   ++..++++++++++.+.|++++. ..+ ..+..|++
T Consensus       270 -------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~~  338 (395)
T 1vef_A          270 -------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGLM  338 (395)
T ss_dssp             -------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETTE
T ss_pred             -------HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEEE
Confidence                   4666655422 22346788888888888764221   34677888899999999987632 211 12344678


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      +|+.++.       +..++...+++++||.+.|+.    .+++|++++  .+++++++++++|++++
T Consensus       339 ~~~~~~~-------~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          339 VGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             EEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEcC-------hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            8888863       245677776537799999963    579999886  78999999999999875

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=100.00  E-value=2.7e-31  Score=257.76  Aligned_cols=353  Identities=12%  Similarity=0.057  Sum_probs=237.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|++++||..|.+....+ ..+|.+.+++.+++++... .|....+..+.++.+++++.+.++  .+.++|++|+|+++|
T Consensus        48 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA  123 (459)
T 4a6r_A           48 EGNKIIDGMAGLWCVNVG-YGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSES  123 (459)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhcccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence            478899998885443233 3589999999999987431 333334455777777777777654  456799999999999


Q ss_pred             HHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccC--C-CCccCC------
Q 014631          122 IQVILTVLAR--------PGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLP--E-KGWEVD------  171 (421)
Q Consensus       122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d------  171 (421)
                      +..+++.+.+        ++++|++.+|+|+++...+...+.             .+..++.+.  . +++ .|      
T Consensus       124 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~  202 (459)
T 4a6r_A          124 VDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGV  202 (459)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHH
Confidence            9999998875        468999999999988765554432             222333211  0 111 34      


Q ss_pred             --HHHHHhhhcc---CceEEEEeCCC-CCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          172 --LDGLEALADE---NTVAMVIVNPG-NPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       172 --~e~l~~~~~~---~~~~i~~~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                        +++|++.+..   +..++++++|. |++|. .++++++++|.++|++||+++|+||+|+++.+.|... ....++...
T Consensus       203 ~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~p  281 (459)
T 4a6r_A          203 VAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQP  281 (459)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCC
Confidence              7788887752   44456677774 55555 4588999999999999999999999999987766532 222233222


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh---hhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHH-
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK---GYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIV-  318 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~-  318 (421)
                      +++   +|||.++.+|+|+||++++        +++++.+.   ... ..+.+.+++++.++.++|+... +...++.+ 
T Consensus       282 di~---t~sK~l~gg~~~lg~v~~~--------~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~  350 (459)
T 4a6r_A          282 DLF---TAAKGLSSGYLPIGAVFVG--------KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKD  350 (459)
T ss_dssp             SEE---EECGGGGTTSSCCEEEEEC--------HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             Cee---ehhhhhcCCCCCccceeeC--------HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHH
Confidence            333   6899976666999999985        46777776   222 2345788999999988887432 23344444 


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeE
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE------GISDDMEFALQLAKEESVIVLPGMAVGMKNWL  392 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~i  392 (421)
                      +.....++.+.+.|.++|.+..+ .+ .|.++++.+......      .......+...+ .++||.+.|+.     +++
T Consensus       351 ~~~~~~~~~l~~~l~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~i  422 (459)
T 4a6r_A          351 DIGPYMQKRWRETFSRFEHVDDV-RG-VGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF-FRNNLIMRACG-----DHI  422 (459)
T ss_dssp             THHHHHHHHHHHHHTTCTTEEEE-EE-ETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH-HHTTEECEEET-----TEE
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEE-EE-EEEEEEEEEecCccccccccchHHHHHHHHHHH-HHCCeEEecCC-----CEE
Confidence            44445555555666666655522 33 355777776532100      000034455554 56799999963     799


Q ss_pred             EEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          393 RITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       393 Ri~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      |++++  .+++++++++++|++++++..+
T Consensus       423 Ri~~~~~~t~e~i~~~l~~l~~~l~~~~~  451 (459)
T 4a6r_A          423 VSAPPLVMTRAEVDEMLAVAERCLEEFEQ  451 (459)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99976  7999999999999999987643

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=100.00  E-value=1.4e-31  Score=255.32  Aligned_cols=326  Identities=15%  Similarity=0.151  Sum_probs=240.7

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      .+++||+.|.|.      .++.+.+++.+.+...   .|.+..+..+++++++++++      .  +++++++||++++.
T Consensus        30 ~~~id~~~~~~~------~~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~------~--~~~v~~~~Gt~a~~   92 (399)
T 2oga_A           30 VPFLDLKAAYEE------LRAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE------T--DHAVGVNSGMDALQ   92 (399)
T ss_dssp             BCSCCHHHHHHH------THHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT------S--SEEEEESCHHHHHH
T ss_pred             CcccccCcCCCC------CCHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC------C--CeEEEecCHHHHHH
Confidence            478999988754      2388999999988762   56666778899999999984      2  26778888899999


Q ss_pred             HHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          124 VILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       124 ~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .+++++ +++||+|+++.|+|+++...++..|.+++.++.++ +++.+|++++++.+++++++|+   |+||||...+  
T Consensus        93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~--  166 (399)
T 2oga_A           93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD--  166 (399)
T ss_dssp             HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred             HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence            999999 89999999999999999999999999999998764 2467999999999987777665   6789999865  


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~  279 (421)
                       +++|.++|+++|+++|+|++|+.+. +.+.   .+..+.    .+++.|+  ||.++.+| |+|++++++       ++
T Consensus       167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~  230 (399)
T 2oga_A          167 -MDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGD-------PE  230 (399)
T ss_dssp             -HHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCTT----CEEEEECCTTSSSCCSS-CCEEEEESC-------HH
T ss_pred             -HHHHHHHHHHcCCEEEEECcccccCccCCe---eccccc----CEEEEeCCCCccCCcCC-ceEEEEeCC-------HH
Confidence             8899999999999999999998753 2222   111111    2778888  79998878 999999853       34


Q ss_pred             HHHHHhhhccc-------------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          280 IVDSIKGYLNI-------------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       280 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                      +.+.+......             ....+++.+.++.+.++.     +++..++.+++.+++.+.|.++|++.+...|..
T Consensus       231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  305 (399)
T 2oga_A          231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPD  305 (399)
T ss_dssp             HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTT
T ss_pred             HHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence            55555443221             113456666666666643     344566667788889999998888774334555


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-----------CC------------CCeEEEEec--CCHH
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-----------GM------------KNWLRITFA--IEPS  401 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~------------~~~iRi~~~--~~~e  401 (421)
                      +.++|+.++...    .+..++...| .++||.+.++...           +.            .+.+|++++  ++++
T Consensus       306 ~~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~e  380 (399)
T 2oga_A          306 TDPVWHLFTVRT----ERRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERP  380 (399)
T ss_dssp             EECCCSSEEEEC----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHH
T ss_pred             CcceeEEEEEEC----CCHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHH
Confidence            666653333211    1355666655 6689999875421           00            157999997  7999


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 014631          402 ALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       402 ~l~~~~~~l~~~~~~~~  418 (421)
                      +++++++.|++++++++
T Consensus       381 di~~~~~~l~~~~~~l~  397 (399)
T 2oga_A          381 QALRVIDAVREWAERVD  397 (399)
T ss_dssp             HHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999987754

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=100.00  E-value=1.2e-31  Score=254.61  Aligned_cols=330  Identities=15%  Similarity=0.139  Sum_probs=236.3

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      ++.+.|+.|.      .+.++.+.+++.+....    .|.+.  ..+.++++.++++++...+  +++++|++|+|++++
T Consensus         4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~a   71 (385)
T 2bkw_A            4 SVDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLG   71 (385)
T ss_dssp             CCCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHH
T ss_pred             ccceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHH
Confidence            4456676663      25667888777654322    22221  1356788888888865333  457899999999999


Q ss_pred             HHHHHHHhc---CCCCeEEEc-CCCCcch-HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCc
Q 014631          122 IQVILTVLA---RPGANILLP-KPGFPLY-EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPC  195 (421)
Q Consensus       122 l~~~~~~l~---~~gd~Vl~~-~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~npt  195 (421)
                      +..++.++.   ++||+|++. .+.|+.+ ...++..|++++.+++. +.++.+|++++++.+++ +++++++++|+|||
T Consensus        72 l~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt  150 (385)
T 2bkw_A           72 WDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTST  150 (385)
T ss_dssp             HHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred             HHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence            999999997   899999887 4555555 36677889999998872 23456899999998876 78999999999999


Q ss_pred             ccccCHHHHHHHHHHHHhc--CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCC
Q 014631          196 GNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPS  272 (421)
Q Consensus       196 G~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~  272 (421)
                      |.+++   +++|.++|++|  |+++|+|++|+...    ...++..+   +..+++.|+||+++ .+|  +||+++++  
T Consensus       151 G~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~~G--~G~~~~~~--  216 (385)
T 2bkw_A          151 AVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDEW---GVDFALTASQKAIGAPAG--LSISLCSS--  216 (385)
T ss_dssp             TEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTTT---TCSEEEEESSSTTCCCSC--EEEEEECH--
T ss_pred             CeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----cccccccc---CceEEEecCccccccCCc--ceEEEEcH--
Confidence            99987   77899999999  99999999997522    11222222   23478899999754 456  59999853  


Q ss_pred             cchhHHHHHH-HHh----------------------hhcc----cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 014631          273 GILQELRIVD-SIK----------------------GYLN----ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA  325 (421)
Q Consensus       273 ~~~~~~~~~~-~~~----------------------~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  325 (421)
                            ++++ .+.                      ....    ..++++...+.++.++++...+.++++..+++++++
T Consensus       217 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~  290 (385)
T 2bkw_A          217 ------RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMS  290 (385)
T ss_dssp             ------HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ------HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence                  2333 221                      1111    123567777777777776422334778888999999


Q ss_pred             HHHHHHh-hcCCCccccCCC-----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEE-ec
Q 014631          326 DICYDRI-KEIPCITCPRKP-----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNWLRIT-FA  397 (421)
Q Consensus       326 ~~~~~~l-~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~-~~  397 (421)
                      +++.+.| +++ ++.+. .+     ..++++|+.++        +..++...| .++||.+.+|..+. ..+++|++ ++
T Consensus       291 ~~l~~~L~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~iRis~~~  359 (385)
T 2bkw_A          291 DWFKDSLVNGL-QLTSV-SRYPSNMSAHGLTAVYVA--------DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMG  359 (385)
T ss_dssp             HHHHHHHHTTT-CCEES-SCSSSTTBCSSCEEEECS--------CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCG
T ss_pred             HHHHHHHHHhc-Cceec-ccCcccccCCceEEEecC--------CHHHHHHHH-HHCCeEEeCCCCcccCCCEEEEEccc
Confidence            9999999 887 77733 32     24678888875        245666665 56899999987653 25789999 65


Q ss_pred             -----CCHHHHHHHHHHHHHHHHHh
Q 014631          398 -----IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       398 -----~~~e~l~~~~~~l~~~~~~~  417 (421)
                           ++++++++++++|+++++++
T Consensus       360 ~~~~~~~~e~i~~~~~~l~~~~~~~  384 (385)
T 2bkw_A          360 VTACNKNLPYMKNCFDLIKLALQRK  384 (385)
T ss_dssp             GGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred             cccccCCHHHHHHHHHHHHHHHHhc
Confidence                 48899999999999987543

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=100.00  E-value=1.1e-30  Score=253.66  Aligned_cols=325  Identities=15%  Similarity=0.126  Sum_probs=223.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK  140 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~  140 (421)
                      +.++.+.+++.    .. ...|.+..+..+||++++++++        .+++++|+||++|+..++++++++||  +++.
T Consensus        55 ~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~  119 (456)
T 2ez2_A           55 AMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAG  119 (456)
T ss_dssp             CCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEE
T ss_pred             cCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--Eecc
Confidence            34566666654    22 2367777778899999999983        24799999999999999999999999  7888


Q ss_pred             CCC-cchHHHHhhcCceeEeeeccCC----C----CccCCHHHHHhhhccCc----eEEEEeCCCC-CcccccCHHHHHH
Q 014631          141 PGF-PLYEANARHTRLEIRHFDLLPE----K----GWEVDLDGLEALADENT----VAMVIVNPGN-PCGNVFTYQQLQK  206 (421)
Q Consensus       141 p~y-~~~~~~~~~~g~~~~~~~~~~~----~----~~~~d~e~l~~~~~~~~----~~i~~~~p~n-ptG~~~~~~~l~~  206 (421)
                      |+| ..+...+...|++++.++++.+    +    ++.+|++++++.+.+++    +++++++|+| |||.+++.+++++
T Consensus       120 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~  199 (456)
T 2ez2_A          120 NMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRA  199 (456)
T ss_dssp             SSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred             ccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHH
Confidence            999 6668888899999999887632    2    36789999999887655    7888999998 9999999999999


Q ss_pred             HHHHHHhcCcEEEEcccccc----------cccCCCCccccc-ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631          207 IAEKARKLGIMVISDEVYDH----------LTFGSTPYVRMG-VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL  275 (421)
Q Consensus       207 i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  275 (421)
                      |+++|++||+++|+||+|+.          ..+.|....++. ......+++++ |++|. +++| ++||+++++     
T Consensus       200 i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~-----  271 (456)
T 2ez2_A          200 VRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND-----  271 (456)
T ss_dssp             HHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-----
T ss_pred             HHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-----
Confidence            99999999999999999986          344443221110 11111234544 78887 4566 789998843     


Q ss_pred             hHHHHHHHHhhhccc------ccCCchHHHHH-HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631          276 QELRIVDSIKGYLNI------SSGPATFVQGA-VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM  348 (421)
Q Consensus       276 ~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  348 (421)
                        +++++.+......      ..+.+.....+ +...++...    ++..++.+++.+++.+.|++. |+. +..|.+++
T Consensus       272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~~~~  343 (456)
T 2ez2_A          272 --DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ----YEYIEHRVKQVRYLGDKLKAA-GVP-IVEPVGGH  343 (456)
T ss_dssp             --HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHT-TCC-BCSSCCSS
T ss_pred             --HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHhcC-CCc-cccCCCce
Confidence              3455555433211      11223223222 222232111    344455566677788888875 777 44677888


Q ss_pred             EEEEecCcccccCCCChHHH-----HHHHHhhcCeeEEe-CCCC------------CCCCeEEEEec---CCHHHHHHHH
Q 014631          349 FVMVKLNLSLLEGISDDMEF-----ALQLAKEESVIVLP-GMAV------------GMKNWLRITFA---IEPSALEEGL  407 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~-----~~~ll~~~gv~v~~-g~~~------------~~~~~iRi~~~---~~~e~l~~~~  407 (421)
                      ++|+.+.... ++ .+..++     ...|++++||.+.+ |..|            ...+++|++++   ++++++++++
T Consensus       344 ~~~~~~~~~~-~~-~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~  421 (456)
T 2ez2_A          344 AVFLDARRFC-EH-LTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVA  421 (456)
T ss_dssp             EEEEEHHHHT-TT-SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHH
T ss_pred             EEEEEhHHhc-CC-CChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHH
Confidence            9998874200 00 022233     55555788998766 4322            11378999998   6899999999


Q ss_pred             HHHHHHHHHhh
Q 014631          408 GRIKAFCQRHA  418 (421)
Q Consensus       408 ~~l~~~~~~~~  418 (421)
                      ++|++++++..
T Consensus       422 ~~l~~~l~~~~  432 (456)
T 2ez2_A          422 DGIIKLYQHKE  432 (456)
T ss_dssp             HHHHHHHHTGG
T ss_pred             HHHHHHHhhhh
Confidence            99999987654

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=100.00  E-value=2.2e-31  Score=257.67  Aligned_cols=353  Identities=17%  Similarity=0.090  Sum_probs=231.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||..|.+....+ ..+|.+.+++.+++.+.  ..|....+..+.+..+++++.+..+. ...+++++|+||++|
T Consensus        59 ~g~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA  134 (451)
T 3oks_A           59 DGNRLIDLGSGIAVTTVG-NSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSEA  134 (451)
T ss_dssp             TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHHH
T ss_pred             CCCEEEEcCCCccccccC-CCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHHH
Confidence            367889998875443222 45899999999998764  23544445567777777777776552 235789999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCC--------CCcc---CCHHH
Q 014631          122 IQVILTVLAR--PGANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPE--------KGWE---VDLDG  174 (421)
Q Consensus       122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~--------~~~~---~d~e~  174 (421)
                      +..+++.+..  .+++|++.+++|+++...+...+.              .+..++.+..        +..+   .+++.
T Consensus       135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  214 (451)
T 3oks_A          135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR  214 (451)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence            9999987753  348999999999988665544322              3344443210        0000   12333


Q ss_pred             HHhhh----ccCceEEEEeCCCCCcc-c-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          175 LEALA----DENTVAMVIVNPGNPCG-N-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       175 l~~~~----~~~~~~i~~~~p~nptG-~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      +++.+    .++..++++++|.|++| . ..+.+.+++|.++|++||+++|+||+|+++.+.|... ....++...+++ 
T Consensus       215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pdi~-  292 (451)
T 3oks_A          215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMF-ACEHEGIDPDLI-  292 (451)
T ss_dssp             HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE-
T ss_pred             HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccch-hhhhcCCCCCee-
Confidence            33333    33566777888866555 3 4567779999999999999999999999887666532 233333322233 


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTAD  326 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~  326 (421)
                        ||||.++. |+|+||++++        +++++.+.... ..+.+.+++++.++.++|+... +...++.++..+..++
T Consensus       293 --t~sK~l~~-G~~iG~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~  361 (451)
T 3oks_A          293 --VTAKGIAG-GLPLSAVTGR--------AEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKD  361 (451)
T ss_dssp             --EECGGGGT-TSSCEEEEEE--------HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             --eehhhhhC-CcceEEEEEC--------HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence              88999865 8999999986        45766665443 2356788999999888887422 2333444444444455


Q ss_pred             HHHHHhhcCCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631          327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA  402 (421)
Q Consensus       327 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~  402 (421)
                      .+.+.+.++|.+..+  +..|.++|+.+.....  +.......+... +.++||.+.|+..|  .+++|++++  .++++
T Consensus       362 ~L~~~~~~~~~~~~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~  436 (451)
T 3oks_A          362 RLGRLQAEDDRIGDV--RGRGAMIAMELVKAGTTEPDADLTKALCAG-AHAAGVIVLSCGTY--GNVVRFLPPLSIGDDL  436 (451)
T ss_dssp             HHHHHHHHCTTEEEE--EEETTEEEEEEBSTTSCCBCHHHHHHHHHH-HHHTTEECEEECTT--SCEEEECCCTTCCHHH
T ss_pred             HHHHHHhhCCCeEEE--EEeeEEEEEEEecCccCCCCHHHHHHHHHH-HHhCCcEEecCCCC--CCEEEEECCCCCCHHH
Confidence            555555555555422  3336678877742100  000013345554 46779999997654  368999876  68999


Q ss_pred             HHHHHHHHHHHHHH
Q 014631          403 LEEGLGRIKAFCQR  416 (421)
Q Consensus       403 l~~~~~~l~~~~~~  416 (421)
                      +++++++|++++++
T Consensus       437 i~~~l~~l~~~l~~  450 (451)
T 3oks_A          437 LNEGLDVLEEVLRG  450 (451)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999864

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=3.8e-31  Score=255.21  Aligned_cols=349  Identities=13%  Similarity=0.056  Sum_probs=225.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||..|......+ ..+|.+.+++.+++.+.....| +.....++++.+++++      + .+++|++++||+++
T Consensus        53 ~g~~ylD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~-~~~~v~~~~sGsea  123 (434)
T 3l44_A           53 DGNKYIDYLAAYGPIITG-HAHPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEAM------P-ALDKVRFVNSGTEA  123 (434)
T ss_dssp             TCCEEEECCGGGTTCSSC-BTCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHC------T-TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHhC------C-CCCEEEEeCchHHH
Confidence            478899998886543322 3689999999999987533334 3434457777777765      2 47899999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCce-eEeeeccCCCCc--------c----CCHHHHHhhhcc--Cce
Q 014631          122 IQVILTVLAR--PGANILLPKPGFPLYEANARHTRLE-IRHFDLLPEKGW--------E----VDLDGLEALADE--NTV  184 (421)
Q Consensus       122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~--------~----~d~e~l~~~~~~--~~~  184 (421)
                      +..+++.+..  ++++|++.+|+|+++...+...+.. ..........+.        .    -|++++++.+.+  ...
T Consensus       124 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  203 (434)
T 3l44_A          124 VMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEV  203 (434)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGE
T ss_pred             HHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCE
Confidence            9999987754  6789999999999876555443322 111111100000        0    178999888763  334


Q ss_pred             EEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          185 AMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       185 ~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++++++| +|++|.+. +++.+++|.++|++||+++|+||+|+++ +.|... ....++...+   +.||||.++ +|+|
T Consensus       204 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~  277 (434)
T 3l44_A          204 AAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGLP  277 (434)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTSS
T ss_pred             EEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCcC
Confidence            4556666 45666655 8888999999999999999999999988 555432 2222222222   347899986 7999


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      +||++++        +++++.+...    ...+.+.+++++.++.++++... +...++.++..+..++.+.+.+..++.
T Consensus       278 iG~~~~~--------~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  349 (434)
T 3l44_A          278 IGAYGGK--------KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNI  349 (434)
T ss_dssp             CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eeeEEEc--------HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999885        4677766552    12345788899999888887422 233333333333333444443333432


Q ss_pred             ccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631          338 ITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR  409 (421)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~  409 (421)
                      +. . .+..|.++++.+......        .......+... +.++||.+.|+..    +.+|+++..+++++++++++
T Consensus       350 ~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~----~~~rl~~~~t~e~i~~~l~~  422 (434)
T 3l44_A          350 DI-T-LNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKL-MLQEGVNLAPSKY----EAWFLTTEHTKEDIEYTIEA  422 (434)
T ss_dssp             CE-E-EEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHH-HHHTTEECCSSTT----CCEECCTTCCHHHHHHHHHH
T ss_pred             CE-E-EEeeccEEEEEEecCcccchhhccccCHHHHHHHHHH-HHHCCeEEeecCC----CcEEEecccCHHHHHHHHHH
Confidence            22 1 233456777766421100        00011345554 4567999998752    56899877999999999999


Q ss_pred             HHHHHHHhhhc
Q 014631          410 IKAFCQRHAKQ  420 (421)
Q Consensus       410 l~~~~~~~~~~  420 (421)
                      |+++++++++.
T Consensus       423 l~~~l~~~~~~  433 (434)
T 3l44_A          423 VGRAFAALADN  433 (434)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhc
Confidence            99999887653

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=100.00  E-value=4.3e-31  Score=254.71  Aligned_cols=335  Identities=14%  Similarity=0.121  Sum_probs=223.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---------CCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSV---------GILPARRAIADYLNSELPCKLSPDDVY  113 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---------g~~~l~~~ia~~l~~~~~~~~~~~~i~  113 (421)
                      ....++|+.+.+.     ++++.+.+++.+.+...  ..|+...         ...++|+++++++      ++++++|+
T Consensus        16 ~~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~   82 (432)
T 3a9z_A           16 PNRKVYMDYNATT-----PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDII   82 (432)
T ss_dssp             --CCEECBTTTCC-----CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEE
T ss_pred             CCCcEEeeCCccC-----CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEE
Confidence            3567888888754     67889999999988752  2333211         1358899999988      35678999


Q ss_pred             EcCCHHHHHHHHHHHhc--------CCCCeEEEcCCCCcch-----------------HHHHhhcCceeEeeeccCCCCc
Q 014631          114 LTAGCKQAIQVILTVLA--------RPGANILLPKPGFPLY-----------------EANARHTRLEIRHFDLLPEKGW  168 (421)
Q Consensus       114 ~~~g~~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~-----------------~~~~~~~g~~~~~~~~~~~~~~  168 (421)
                      +|+|+++++..++.++.        ++||+|+++.|+|+.+                 ...++..|.+++.++++++ ++
T Consensus        83 ~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~  161 (432)
T 3a9z_A           83 FTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NG  161 (432)
T ss_dssp             EESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TS
T ss_pred             EeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cC
Confidence            99999999999999885        5899999999999765                 3344557899999987642 34


Q ss_pred             cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC----------cEEEEcccccccccCCCCccccc
Q 014631          169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG----------IMVISDEVYDHLTFGSTPYVRMG  238 (421)
Q Consensus       169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~li~De~~~~~~~~~~~~~~~~  238 (421)
                      .+|++++++.++++++++++++|+||||.+++   +++|.++|+++|          +++|+|++|+.+.    ....+.
T Consensus       162 ~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~  234 (432)
T 3a9z_A          162 QVEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVE  234 (432)
T ss_dssp             SCCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHH
T ss_pred             CcCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChh
Confidence            68999999999888999999999999999988   467888899999          9999999997632    222232


Q ss_pred             ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccc
Q 014631          239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTK  310 (421)
Q Consensus       239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~  310 (421)
                      ..+.+   +++.|+||++|   .|+||+++++...       ...+...        ....++++...+.++.++++.. 
T Consensus       235 ~~~~d---~~~~s~~K~~g---~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-  300 (432)
T 3a9z_A          235 DLGVD---FLTIVGHKFYG---PRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-  300 (432)
T ss_dssp             HHCCS---EEEEEGGGTTC---CSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-
T ss_pred             hcCCC---EEEEehhHhcC---CcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-
Confidence            23322   56889999863   5699999964210       1111111        1122456777777777777642 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCC-----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC
Q 014631          311 EDFFSKIVDILRDTADICYDRIKEIPCITCP-RKP-----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM  384 (421)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~  384 (421)
                      ..++++..++++++++++.+.|++++|+.+. ..|     ..+...++.++...    .+..++...+   .++.+.+|.
T Consensus       301 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~i~~~~G~  373 (432)
T 3a9z_A          301 SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----LRGYMVLAQC---QTLLASVGA  373 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----CCHHHHHHHC---SSEECBSSC
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----CcHHHHHHHh---cCeEEeccc
Confidence            3467888899999999999999876554321 122     12234555554310    1244444432   367776665


Q ss_pred             CC---------------CC-----CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          385 AV---------------GM-----KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       385 ~~---------------~~-----~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .+               +.     .+++|++++  ++++++++++++|+++++++++
T Consensus       374 ~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~  430 (432)
T 3a9z_A          374 SCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG  430 (432)
T ss_dssp             GGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33               21     378999998  4899999999999999987754

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.98  E-value=9e-32  Score=253.11  Aligned_cols=323  Identities=14%  Similarity=0.109  Sum_probs=226.3

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCC---CCC----CHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA---EFDCYSP---SVG----ILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~---~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      .+++++.|.      .++|+.+++++.+.+...   ....|..   ..+    ..++++.+++++    |.. ++++|++
T Consensus         3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~v~~   71 (360)
T 1w23_A            3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL----QIP-NDYQILF   71 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEE
T ss_pred             ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEE
Confidence            467777774      267789999999887542   0111211   122    335555555555    432 3579999


Q ss_pred             cCCH-HHHHHHHHHHhcCC---CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh-hhccCceEEEEe
Q 014631          115 TAGC-KQAIQVILTVLARP---GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA-LADENTVAMVIV  189 (421)
Q Consensus       115 ~~g~-~~al~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~-~~~~~~~~i~~~  189 (421)
                      |+|+ ++++..++..+..+   ||.|+++.++|.. ...++..| +++.++++++++ .+|++++++ .+++++++++++
T Consensus        72 ~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~  148 (360)
T 1w23_A           72 LQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHIT  148 (360)
T ss_dssp             ESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEE
T ss_pred             ECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEe
Confidence            9998 99999999888765   5677777776654 34466789 999998864333 378899998 888889999999


Q ss_pred             CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      +|+||||.+++  ++      +++||+++|+|++|+.+..    ..++..+   +  ++++|+||.|+++|  +||++++
T Consensus       149 ~~~nptG~~~~--~i------~~~~~~~li~D~a~~~~~~----~~~~~~~---d--i~~~s~sK~~~~~G--~G~~~~~  209 (360)
T 1w23_A          149 SNNTIYGTQYQ--NF------PEINHAPLIADMSSDILSR----PLKVNQF---G--MIYAGAQKNLGPSG--VTVVIVK  209 (360)
T ss_dssp             SEETTTTEECS--SC------CCCCSSCEEEECTTTTTSS----CCCGGGC---S--EEEEETTTTTSCTT--CEEEEEE
T ss_pred             CCCCCcceecc--cc------cccCCceEEEechhhcCCC----CcCcccC---C--EEEEEcccccCCCC--cEEEEEc
Confidence            99999999987  33      2379999999999987432    1233333   1  78899999998666  8999986


Q ss_pred             CCCcchhHHHHHHHHhhhc-------------ccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcC
Q 014631          270 DPSGILQELRIVDSIKGYL-------------NISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +        ++++.+....             ...++++...+.++..+++...+. ++++..++++++++++.+.|+++
T Consensus       210 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  281 (360)
T 1w23_A          210 K--------DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES  281 (360)
T ss_dssp             H--------HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             H--------HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence            3        3444333221             112456667777777777542233 67888999999999999999988


Q ss_pred             CCc-cccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631          336 PCI-TCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       336 ~g~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      +++ .....|  .+++++|+.++...     +..+++.+ +.++||.+.+|..+  .+++|++++  ++++++++++++|
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-l~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l  353 (360)
T 1w23_A          282 NGFYVGHAEKGSRSLMNVTFNLRNEE-----LNQQFLAK-AKEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELM  353 (360)
T ss_dssp             TTSSEESSCGGGBCSSEEEEECSSHH-----HHHHHHHH-HHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHH
T ss_pred             cCcccccCCchhccCcEEEEEcCCCc-----cHHHHHHH-HHHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHH
Confidence            655 421123  23558888886321     23456655 46789999988754  578999998  6899999999999


Q ss_pred             HHHHHH
Q 014631          411 KAFCQR  416 (421)
Q Consensus       411 ~~~~~~  416 (421)
                      ++++++
T Consensus       354 ~~~~~~  359 (360)
T 1w23_A          354 IQFKEN  359 (360)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            998764

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.98  E-value=5.6e-30  Score=246.21  Aligned_cols=335  Identities=16%  Similarity=0.169  Sum_probs=238.0

Q ss_pred             cCCCCee--eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           41 NDPRPII--PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP-SVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        41 ~~~~~~i--~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      .+|.+++  +|+.|.|.    ++.|+.+.+++.+.+...   .|++ ..+..++|++++++++        .+++++|+|
T Consensus        11 ~gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~g   75 (424)
T 2po3_A           11 FGGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCN   75 (424)
T ss_dssp             GTCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESC
T ss_pred             hcCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCC
Confidence            3456655  68888876    567889999999988763   4776 6778999999999984        258999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccc
Q 014631          118 CKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGN  197 (421)
Q Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~  197 (421)
                      +++++..++.++. +||+|++++|+|+++...+...|++++.+++++ +++.+|++++++.+++++++|+++   ||||.
T Consensus        76 gt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~  150 (424)
T 2po3_A           76 ATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGV---HLWGR  150 (424)
T ss_dssp             HHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEE---CGGGC
T ss_pred             HHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEE---CCCCC
Confidence            9999999999885 789999999999999999999999999998864 356789999999998888888775   48998


Q ss_pred             ccCHHHHHHHHHHHHhcCcEEEEccccc-ccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631          198 VFTYQQLQKIAEKARKLGIMVISDEVYD-HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ  276 (421)
Q Consensus       198 ~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  276 (421)
                      .   .++++|.++|+++|+++|+|++|+ ++.+.+.   ++..+.   + +++.||||.++++|.|+||+++++      
T Consensus       151 ~---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~------  214 (424)
T 2po3_A          151 P---CAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLG---D-AEVFSFHATKAVNAFEGGAVVTDD------  214 (424)
T ss_dssp             C---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS---S-EEEEECCTTSSSCCSSCEEEEESC------
T ss_pred             c---CCHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccc---C-EEEEeCCCCCCccCCCCeEEEeCC------
Confidence            7   678999999999999999999999 4555442   222222   2 888999966667778999999863      


Q ss_pred             HHHHHHHHhhhccc-c---c------CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          277 ELRIVDSIKGYLNI-S---S------GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       277 ~~~~~~~~~~~~~~-~---~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                       +++++.+...... .   .      ....+.+.++..++..  ...+++..++.+++++++.+.|+++|++.+...|.+
T Consensus       215 -~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  291 (424)
T 2po3_A          215 -ADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRH  291 (424)
T ss_dssp             -HHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGG
T ss_pred             -HHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence             3455655543221 0   0      0101122222222221  244667778888888999999998888873322433


Q ss_pred             e----eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------------CC-------CeEEEEec--CC
Q 014631          347 S----MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------------MK-------NWLRITFA--IE  399 (421)
Q Consensus       347 ~----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------~~-------~~iRi~~~--~~  399 (421)
                      +    .++++.++.... + .+..++.. .+.++||.+.+.....              .+       ..+|+++.  ++
T Consensus       292 ~~~~~~~~~i~~~~~~~-~-~~~~~l~~-~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t  368 (424)
T 2po3_A          292 GLNNHQYVIVEIDEATT-G-IHRDLVME-VLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIG  368 (424)
T ss_dssp             SCCCCCCEEEEECHHHH-S-SCHHHHHH-HHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCC
T ss_pred             CccccEEEEEEECCccc-h-hhHHHHHH-HHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCC
Confidence            3    233355552100 0 13555655 4577899998732100              01       12777643  78


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 014631          400 PSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~  417 (421)
                      +++++++++.|.+++++.
T Consensus       369 ~e~i~~~~~~L~~~~~~~  386 (424)
T 2po3_A          369 DDDIRRVADLLRLCATRG  386 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhh
Confidence            999999999999988664

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.98  E-value=1.4e-31  Score=251.99  Aligned_cols=325  Identities=13%  Similarity=0.113  Sum_probs=227.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-c-EEE
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYSPSVGILPARRAIADYLNSELPCKLSPD-D-VYL  114 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~-i~~  114 (421)
                      .++.++.|.      .+.|+.+++++.+.+.+..        ...|.  ....++++.+++.+.+.+|.  +++ + +++
T Consensus         4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~   73 (362)
T 2c0r_A            4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFI   73 (362)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred             ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence            455666553      3788999999998875320        01121  12345666777777776663  443 5 578


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCcc--CCHHHHHhhhccCceEEEEeC
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWE--VDLDGLEALADENTVAMVIVN  190 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~--~d~e~l~~~~~~~~~~i~~~~  190 (421)
                      |+|++++++.++.+++++||+|++.++.|++.  ...++..| +++.++.+.+.+++  +|.++++  ++++++++++++
T Consensus        74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~  150 (362)
T 2c0r_A           74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS  150 (362)
T ss_dssp             SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence            89999999999999999999999887766553  45667789 99999876322233  4655543  677899999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      |+||||..++  ++++|      +|+++|+|++|+.+.    ...++..+     .+++.|+||+++++|  +||+++++
T Consensus       151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~----~~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~  211 (362)
T 2c0r_A          151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILS----RPFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE  211 (362)
T ss_dssp             EETTTTEECS--SCCCC------TTSCEEEECTTTTTS----SCCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred             CcCccceecc--ccccc------CCCEEEEEChhhccC----CccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence            9999999754  35554      899999999998743    12223222     277789999998788  89999964


Q ss_pred             CCcchhHHHHHHHHhh-------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          271 PSGILQELRIVDSIKG-------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      .        +.+.+..             .....++++...+.++.++++...+. ++++++++++++++++.+.|++++
T Consensus       212 ~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  283 (362)
T 2c0r_A          212 D--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG  283 (362)
T ss_dssp             G--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             H--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            2        2222211             11223477888888888888753333 688899999999999999999884


Q ss_pred             Cc-cccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631          337 CI-TCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK  411 (421)
Q Consensus       337 g~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~  411 (421)
                      ++ .+...+  ..+.++++.++...     +..+++.. |.++||.+.+|..+  .+++|+|++  +++++++++++.|+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-L~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~  355 (362)
T 2c0r_A          284 GFYRGCVDVDSRSDMNITFRLASEE-----LEKEFVKA-SEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFME  355 (362)
T ss_dssp             TSSEESSCGGGBCSSEEEEECSCHH-----HHHHHHHH-HHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CccccCCChHHcCCcEEEEEcCCcc-----hHHHHHHH-HHHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHH
Confidence            35 532111  13445677775311     24566665 46779999888765  467999998  58999999999999


Q ss_pred             HHHHHh
Q 014631          412 AFCQRH  417 (421)
Q Consensus       412 ~~~~~~  417 (421)
                      ++++++
T Consensus       356 ~~~~~~  361 (362)
T 2c0r_A          356 HFKRSR  361 (362)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998765

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.98  E-value=4e-31  Score=255.73  Aligned_cols=342  Identities=11%  Similarity=0.060  Sum_probs=231.8

Q ss_pred             CCC--CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           42 DPR--PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD--CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        42 ~~~--~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      .|+  +++||..|......+ ..+|.+.+++.+++++....  .+.+.....+|++.+++++    +  ...++|++++|
T Consensus        71 dG~~~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~----~--~~~~~v~~~~s  143 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAIHG-HGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDIT----P--AGLDTVFFSDS  143 (457)
T ss_dssp             TTEEEEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHS----S--TTEEEEEEESS
T ss_pred             CCCeeEEEECCCcHhhhccC-CCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC----C--CCcCEEEEeCc
Confidence            467  889998774332222 37899999999998863211  1112222345555555554    2  45679999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCCCCccCCHHHH
Q 014631          118 CKQAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus       118 ~~~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +++|++.+++.+.+       +| +.|++.+++|+++...+...+.              ++..++.+.......|++++
T Consensus       144 GseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~l  223 (457)
T 3tfu_A          144 GSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAF  223 (457)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHH
Confidence            99999999988764       66 5899999999987655554421              22333332221112478899


Q ss_pred             Hhhhc---cCceEEEEeC-CCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          176 EALAD---ENTVAMVIVN-PGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       176 ~~~~~---~~~~~i~~~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                      ++.++   ++++++++.. ++|++|..+ +++.+++|.++|++||+++|+||+|+++.+.|..+ .+..++...+++   
T Consensus       224 e~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii---  299 (457)
T 3tfu_A          224 EAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM---  299 (457)
T ss_dssp             HHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---
T ss_pred             HHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE---
Confidence            88886   4566666666 689999876 77889999999999999999999999987766532 222333333333   


Q ss_pred             ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-----c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631          251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-----L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT  324 (421)
Q Consensus       251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (421)
                      ||||.++.+.+|+||++++        +++++.+...     . ..+.+.++++++++.++|+...+   ++..++++++
T Consensus       300 t~sK~l~gG~~~lG~v~~~--------~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~  368 (457)
T 3tfu_A          300 CVGKALTGGYLSLAATLCT--------ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITEL  368 (457)
T ss_dssp             EECGGGGTTSSCCEEEEEE--------HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHH
T ss_pred             EEChhhhCCCcceEEEEEc--------HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHH
Confidence            8999865433799999996        4677777421     1 23457889999998888864222   2344555566


Q ss_pred             HHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631          325 ADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE  399 (421)
Q Consensus       325 ~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~  399 (421)
                      .+++.+.|+++   |++..+  +..|.++++.++..     .+..++...+ .++||.+.|.     .+++|++++  .+
T Consensus       369 ~~~l~~~L~~l~~~~~v~~v--r~~G~~~~i~l~~~-----~~~~~~~~~l-~~~Gv~v~~~-----~~~lRi~p~~~~t  435 (457)
T 3tfu_A          369 AAGLTAGLDTARALPAVTDV--RVCGAIGVIECDRP-----VDLAVATPAA-LDRGVWLRPF-----RNLVYAMPPYICT  435 (457)
T ss_dssp             HHHHHHHHGGGGGSTTEEEE--EECSSCEEEEESSC-----CCHHHHHHHH-HHTTEECCCB-----TTEEEECCCTTCC
T ss_pred             HHHHHHHHHHHhcCCCeeee--ecCCeEEEEEECCc-----ccHHHHHHHH-HHCCeEEEec-----CCEEEEECCCCCC
Confidence            66666666653   444422  23466788888642     1356666665 5569999874     368999976  69


Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q 014631          400 PSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++++++++++|+++++++.
T Consensus       436 ~eei~~~l~~L~~~l~~~~  454 (457)
T 3tfu_A          436 PAEITQITSAMVEVARLVG  454 (457)
T ss_dssp             HHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            9999999999999998764

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.98  E-value=3.3e-30  Score=250.66  Aligned_cols=349  Identities=17%  Similarity=0.121  Sum_probs=235.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|.+++||..|......+ ..+|.+.+++.+++++..  .+....+..+.+..+++++.+..+  .+.++|++++||++|
T Consensus        52 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA  126 (476)
T 3i5t_A           52 DGRRLIDGPAGMWCAQVG-YGRREIVDAMAHQAMVLP--YASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGSTA  126 (476)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCC--CCCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhcc--CcccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHHH
Confidence            478899998885332222 368999999999998732  121224456888888888888665  345799999999999


Q ss_pred             HHHHHHHhcC-------C-CCeEEEcCCCCcchHHHHhhcCcee-------------EeeeccC--CCCccCC-------
Q 014631          122 IQVILTVLAR-------P-GANILLPKPGFPLYEANARHTRLEI-------------RHFDLLP--EKGWEVD-------  171 (421)
Q Consensus       122 l~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~g~~~-------------~~~~~~~--~~~~~~d-------  171 (421)
                      +..+++.+.+       + +++|++.+++|+++...+...+...             ..++.+.  .. +..+       
T Consensus       127 ~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~  205 (476)
T 3i5t_A          127 VDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDD  205 (476)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHH
Confidence            9999998753       3 4799999999999876655443321             1222110  01 1122       


Q ss_pred             -HHHHHhhhc----cCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc-ccCCCC
Q 014631          172 -LDGLEALAD----ENTVAMVIVNPGNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG-VFGSTV  244 (421)
Q Consensus       172 -~e~l~~~~~----~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~  244 (421)
                       +++|++.+.    ++++++++..++|++|. +++++.+++|.++|++||+++|+||+|+++.+.|..+ ... .++...
T Consensus       206 ~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~p  284 (476)
T 3i5t_A          206 LVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVVP  284 (476)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCCc
Confidence             678888775    33455555555778885 7788999999999999999999999999987777532 222 333222


Q ss_pred             CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------c-ccccCCchHHHHHHHHHhhccchhHHH
Q 014631          245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------L-NISSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      +++   ++||.++ +| +|+|+++++        +++++.+...       . ..+.+.++++++++.++|+...+   +
T Consensus       285 di~---t~sK~l~-~G~~plg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~  349 (476)
T 3i5t_A          285 DII---TFAKGVT-SGYVPLGGLAIS--------EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---E  349 (476)
T ss_dssp             SEE---EECGGGG-TTSSCCEEEEEC--------HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---T
T ss_pred             chh---hhhhhhc-CCCcCeEEEEEC--------HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---H
Confidence            333   6889976 48 999999995        4677777653       1 23557889999999998874222   2


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCC------ChHHHHHHHHhhcCeeEEeCCCC
Q 014631          316 KIVDILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGIS------DDMEFALQLAKEESVIVLPGMAV  386 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gv~v~~g~~~  386 (421)
                      +..++++++.+++.+.|+++   |.+..+ . ..|.++++.+.........      ....+...+ .++||.+.|..  
T Consensus       350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~-~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g--  424 (476)
T 3i5t_A          350 GIVDQAREMADYFAAALASLRDLPGVAET-R-SVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERC-FELGLIVRPLG--  424 (476)
T ss_dssp             THHHHHHHHHHHHHHHHHTTTTSTTEEEE-E-EETTEEEEEECCC-----CCHHHHHHHHHHHHHH-HHTTEECEEET--
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEE-E-ecCceeEEEEecCccccccccchhHHHHHHHHHH-HHCCCEEEecC--
Confidence            34555666666666666643   444322 2 3355767777532100000      023455544 56799999842  


Q ss_pred             CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          387 GMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                         +++|++++  .+++++++++++|+++++++.++
T Consensus       425 ---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~  457 (476)
T 3i5t_A          425 ---DLCVISPPLIISRAQIDEMVAIMRQAITEVSAA  457 (476)
T ss_dssp             ---TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence               78999965  89999999999999999887543

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.98  E-value=1.3e-29  Score=241.46  Aligned_cols=318  Identities=14%  Similarity=0.073  Sum_probs=214.8

Q ss_pred             eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHH
Q 014631           48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS--PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVI  125 (421)
Q Consensus        48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~  125 (421)
                      +++.|.|......+..+.+.+++..+........|.  +.....++++.++++++      .+  +.+++++|++++..+
T Consensus        24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~--~~i~~~sG~~a~~~~   95 (398)
T 2rfv_A           24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER------GE--AGLATASGISAITTT   95 (398)
T ss_dssp             TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT------CS--EEEEESSHHHHHHHH
T ss_pred             CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC------CC--cEEEECCHHHHHHHH
Confidence            467777664333334455555544211111122333  34455678888888773      22  556666677999999


Q ss_pred             HHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          126 LTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       126 ~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +.++.++||+|+++.|+|+++...+    ...|.+++.++.+       |++++++.++++++++++++|+||||.+++ 
T Consensus        96 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~-  167 (398)
T 2rfv_A           96 LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD-  167 (398)
T ss_dssp             HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC-
T ss_pred             HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC-
Confidence            9999999999999999999887766    7789998888752       789999999888999999999999999986 


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~  280 (421)
                        +++|.++|++||+++|+|++|+.+.+. .   ++ .++   ..+++.|+||+|+++|.|+ ||+++++        ++
T Consensus       168 --l~~i~~l~~~~~~~li~De~~~~~~~~-~---~~-~~~---~di~~~s~sK~~~~~g~~~~G~~~~~~--------~~  229 (398)
T 2rfv_A          168 --IETVAGIAHQQGALLVVDNTFMSPYCQ-Q---PL-QLG---ADIVVHSVTKYINGHGDVIGGIIVGKQ--------EF  229 (398)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTTCTTTC-C---GG-GGT---CSEEEEETTTTTTCSSCCCCEEEEECH--------HH
T ss_pred             --HHHHHHHHHHcCCEEEEECCCcccccC-C---ch-hhC---CcEEEEeCcccccCCCCceEEEEEECH--------HH
Confidence              899999999999999999999976542 1   22 222   3488899999999999998 9999863        34


Q ss_pred             HH-HHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--------------CCccccCC
Q 014631          281 VD-SIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--------------PCITCPRK  343 (421)
Q Consensus       281 ~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------~g~~~~~~  343 (421)
                      ++ .+......  ..+.+++.+.++..+++.     .....++..++.+.+.+.|++.              |++.+. .
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~  303 (398)
T 2rfv_A          230 IDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELG-Q  303 (398)
T ss_dssp             HHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-H
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH-H
Confidence            44 45444332  346778888888888864     2233334455556666666553              233311 1


Q ss_pred             C---CceeEEEEecCcccccCCCChHHHHHHHHhh---cCeeEEeCCCCC----------------------C-CCeEEE
Q 014631          344 P---EGSMFVMVKLNLSLLEGISDDMEFALQLAKE---ESVIVLPGMAVG----------------------M-KNWLRI  394 (421)
Q Consensus       344 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~---~gv~v~~g~~~~----------------------~-~~~iRi  394 (421)
                      |   ..+.++++.++.        .......++++   .|+.+.+|..+.                      . ++.+|+
T Consensus       304 ~~~~~~g~~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRl  375 (398)
T 2rfv_A          304 RQMSLPGGIISFEIAG--------GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRL  375 (398)
T ss_dssp             HHCSSCCSEEEEEETT--------HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEE
T ss_pred             hhCCCCceEEEEEEcC--------CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence            1   235566667762        11223334433   378888885531                      1 578999


Q ss_pred             Eec--CCHHHHHHHHHHHHHH
Q 014631          395 TFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       395 ~~~--~~~e~l~~~~~~l~~~  413 (421)
                      |++  +++++++.+.+.|+++
T Consensus       376 s~~~~~~~~~i~~l~~al~~~  396 (398)
T 2rfv_A          376 SVGLEDPEDIINDLEHAIRKA  396 (398)
T ss_dssp             ECCSSCHHHHHHHHHHHHHHH
T ss_pred             EecCCCHHHHHHHHHHHHHhh
Confidence            998  5677887777777653

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.98  E-value=2e-30  Score=250.98  Aligned_cols=349  Identities=11%  Similarity=0.062  Sum_probs=224.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||..|.+....+ ..+|.+.+++.+++.+..  .|....+..+.++++++++.+..+  ...++|++|+||++|
T Consensus        42 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA  116 (448)
T 3dod_A           42 NGKEYYDGFSSVWLNVHG-HRKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA  116 (448)
T ss_dssp             TSCEEEETTHHHHTCSSC-BSCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence            478899998886443333 358999999999987642  233334445777777777777654  345799999999999


Q ss_pred             HHHHHHHhcC----CC----CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCcc-----------
Q 014631          122 IQVILTVLAR----PG----ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWE-----------  169 (421)
Q Consensus       122 l~~~~~~l~~----~g----d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~-----------  169 (421)
                      +..+++.+.+    +|    |+|++.+|+|+++...+...+..             +..++.+  +.+.           
T Consensus       117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  194 (448)
T 3dod_A          117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRD  194 (448)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhH
Confidence            9999998865    44    99999999999876554433321             2222221  1111           


Q ss_pred             CCHHHHHhhhc--cCceEEEEeCC-C-CCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          170 VDLDGLEALAD--ENTVAMVIVNP-G-NPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       170 ~d~e~l~~~~~--~~~~~i~~~~p-~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                      .|+++|++.+.  ++..++++++| + |++|. .++++.+++|.++|++||+++|+||+|+++.+.|... ....++...
T Consensus       195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~  273 (448)
T 3dod_A          195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP  273 (448)
T ss_dssp             HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence            14788888876  23334445555 5 78885 4677889999999999999999999999887666543 222233222


Q ss_pred             CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhh-------hc-ccccCCchHHHHHHHHHhhccc-hhHH
Q 014631          245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKG-------YL-NISSGPATFVQGAVPQIFKNTK-EDFF  314 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~  314 (421)
                      +   +.+|||.++ +| +|+||++++        +++++.+..       .. ..+.+.+++++.++.++|+... +...
T Consensus       274 d---i~t~sK~l~-~G~~~ig~v~~~--------~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~  341 (448)
T 3dod_A          274 D---LMAAGKGIT-GGYLPIAVTFAT--------EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIV  341 (448)
T ss_dssp             S---EEEECGGGG-TTSSCCEEEEEE--------HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred             C---EEEeccccc-CCcCceEEEEEC--------HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHH
Confidence            2   337899986 48 599999996        467777765       22 2345778899999988887432 2334


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC--CCC----hHHHHHHHHhhcCeeEEeCCCCCC
Q 014631          315 SKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG--ISD----DMEFALQLAKEESVIVLPGMAVGM  388 (421)
Q Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~ll~~~gv~v~~g~~~~~  388 (421)
                      ++.++..+..++.+.+ +.++|.+. . .+..|.++|+.++......  ...    ..++...+ .++||.+.|+     
T Consensus       342 ~~~~~~~~~~~~~l~~-l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~-----  412 (448)
T 3dod_A          342 EQVAEKSKKLHFLLQD-LHALPHVG-D-IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKM-RELGMLTRPL-----  412 (448)
T ss_dssp             HHHHHHHHHHHHHHHH-HTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECCEE-----
T ss_pred             HHHHHHHHHHHHHHHH-HhcCCCeE-E-EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHH-HHCCcEEecc-----
Confidence            4444444445555555 55554443 2 2234668888876421000  000    24566655 5679999987     


Q ss_pred             CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          389 KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       389 ~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .+++|++++  .+++++++++++|++++++..+
T Consensus       413 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~  445 (448)
T 3dod_A          413 GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTS  445 (448)
T ss_dssp             TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            278999765  8999999999999999987643

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.98  E-value=1.9e-30  Score=251.32  Aligned_cols=348  Identities=14%  Similarity=0.136  Sum_probs=232.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      .+..++||..|.+....++ .++.+.+++.+++.+..   +... .+..++++.+++.+.+.++  .++++|++|+|+++
T Consensus        48 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse  121 (449)
T 3a8u_X           48 KGRKVYDSLSGLWTCGAGH-TRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE  121 (449)
T ss_dssp             TCCEEEETTHHHHTCTTCB-SCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred             CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence            3678899987764433333 38999999999987632   1111 2334556666666665544  46789999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEEcCCCCcchHH-HHhhcCc------------eeEeeeccC--CCC-ccCC-----
Q 014631          121 AIQVILTVLAR--------PGANILLPKPGFPLYEA-NARHTRL------------EIRHFDLLP--EKG-WEVD-----  171 (421)
Q Consensus       121 al~~~~~~l~~--------~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~~~~~~--~~~-~~~d-----  171 (421)
                      |++.+++.+..        +||+|++.+|+|+++.. .....|.            ++..++.+.  ..+ .++|     
T Consensus       122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~  201 (449)
T 3a8u_X          122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG  201 (449)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence            99999988754        67999999999998743 3333331            233444321  111 1245     


Q ss_pred             ---HHHHHhhhcc---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          172 ---LDGLEALADE---NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       172 ---~e~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                         ++++++.+++   ....+++++| +|+||. ..+.+.+++|.++|++||+++|+||+|+++.+.|... .+..++..
T Consensus       202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~  280 (449)
T 3a8u_X          202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMF-GADSFGVT  280 (449)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-HHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcch-hhhhcCCC
Confidence               8999988862   2334556777 477997 5578999999999999999999999998776555421 22222222


Q ss_pred             CCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh---------c-ccccCCchHHHHHHHHHhhccchh
Q 014631          244 VPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY---------L-NISSGPATFVQGAVPQIFKNTKED  312 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~l~~~~~~  312 (421)
                      .+++   |+||.++. | +|+||++++        +++++.+...         . ..+.+.+++++.++.++++...+ 
T Consensus       281 ~di~---s~sK~l~~-G~~~~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-  347 (449)
T 3a8u_X          281 PDLM---CIAKQVTN-GAIPMGAVIAS--------TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK-  347 (449)
T ss_dssp             CSEE---EECGGGGT-TSSCCEEEEEE--------HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred             CCEE---EEcccccC-CCCceEEEEEC--------HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-
Confidence            2233   88999874 7 999999986        3567776553         1 22446788888888888864222 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631          313 FFSKIVDILRDTADICYDRIKEIPCITCP-RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW  391 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  391 (421)
                        ++..++++++++++.+.|++++.+..+ ..+..|+++|+.++........+..++...++ ++||.+.|+.     ++
T Consensus       348 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~  419 (449)
T 3a8u_X          348 --ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFGG-----DT  419 (449)
T ss_dssp             --TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEET-----TE
T ss_pred             --cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecCC-----CE
Confidence              245667778888888888765323211 01334678898886421000001225666654 5699999972     78


Q ss_pred             EEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          392 LRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +|++++  .+++++++++++|+++++++
T Consensus       420 iRis~~~~~t~~~i~~~l~~l~~~l~~~  447 (449)
T 3a8u_X          420 LQFGPTFNSKPQDLDRLFDAVGEVLNKL  447 (449)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence            999975  89999999999999998765

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.97  E-value=6.2e-30  Score=251.77  Aligned_cols=329  Identities=11%  Similarity=0.081  Sum_probs=236.8

Q ss_pred             HHHHHHHHHHHhc---CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcE--EEcCCHHHHHHHHHHHhcCCC-----
Q 014631           64 PVAADAVVDAVRS---AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDV--YLTAGCKQAIQVILTVLARPG-----  133 (421)
Q Consensus        64 ~~v~~a~~~~~~~---~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~~~g-----  133 (421)
                      +.+.+++.+.+..   .+...|....+..++++.+++++.+.+|.+.+++++  ++|+|+++++..+++++.++|     
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g  189 (514)
T 3mad_A          110 EHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKG  189 (514)
T ss_dssp             HHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcC
Confidence            4444444444432   122344444556788999989998888866555788  999999999999999987766     


Q ss_pred             ---CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 014631          134 ---ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK  210 (421)
Q Consensus       134 ---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~  210 (421)
                         |+|+++.++|.++...+...|.+++.++.+.  ++.+|+++|++++++++++|++++|+||||.+.+   +++|.++
T Consensus       190 ~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l  264 (514)
T 3mad_A          190 ITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAAL  264 (514)
T ss_dssp             CSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHH
T ss_pred             CCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHH
Confidence               9999999999999999999999999998764  5679999999999989999999999999999966   7899999


Q ss_pred             HHhcCcEEEEccccccccc-----CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631          211 ARKLGIMVISDEVYDHLTF-----GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK  285 (421)
Q Consensus       211 ~~~~~~~li~De~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~  285 (421)
                      |++||+++|+|++|+++.+     .|.....+. ....+..+++.|++|+ +.+|.++|+++++++        ......
T Consensus       265 a~~~~i~livDea~~~~~~~~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~~--------~~~~~~  334 (514)
T 3mad_A          265 AAEHGIGCHVDACLGGFILPWAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRRP--------DLLHYQ  334 (514)
T ss_dssp             HHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESSH--------HHHTTT
T ss_pred             HHHhCCeEEEecccccccchhHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeCH--------HHhccc
Confidence            9999999999999998653     122111221 1112234778899999 466788999998641        222111


Q ss_pred             hhc------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEe
Q 014631          286 GYL------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVK  353 (421)
Q Consensus       286 ~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~  353 (421)
                      ...            ...++.+.....++..++......++++..++.+++++++.+.|++++++.++ .+..+ ++++.
T Consensus       335 ~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~-~~~~~  412 (514)
T 3mad_A          335 YFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKIL-GDPLW-VIAVA  412 (514)
T ss_dssp             CEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEES-SCCSS-EEEEE
T ss_pred             cccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCCeE-EEEEe
Confidence            100            00123333333334444443335677888999999999999999998888844 44433 66665


Q ss_pred             cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHhhh
Q 014631          354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .+.      .+..++...| .++||.+ +|..+  ++.+|++++   .+++++++++++|+++++++.+
T Consensus       413 ~~~------~~~~~l~~~L-~~~Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~  471 (514)
T 3mad_A          413 SDE------LNIYQVMEEM-AGRGWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA  471 (514)
T ss_dssp             CSS------SCHHHHHHHH-HTTTCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCC------CCHHHHHHHH-HhcCCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            532      1456676665 5669988 54433  578999987   4569999999999999987754

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.97  E-value=4.2e-30  Score=247.36  Aligned_cols=332  Identities=16%  Similarity=0.180  Sum_probs=220.6

Q ss_pred             CCCCeeeccCCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           42 DPRPIIPLGHGDPSAFPCFR-TTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .|..++||..|.+.  ..++ .+|.+.+++.+++++...  ..| +.....++++.+++++    |    .+++++++|+
T Consensus        63 ~G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~sG  131 (433)
T 1z7d_A           63 NDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL----G----YDKVLMMNTG  131 (433)
T ss_dssp             TCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH----T----CSEEEEESSH
T ss_pred             CCCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc----C----CCeEEEeCCH
Confidence            36778888876433  1234 789999999999876321  112 2222345666666655    2    5799999999


Q ss_pred             HHHHHHHHHHhc---------CCC-CeEEEcCCCCcchHHHH-hhcC------------ceeEeeeccCCCCccCCHHHH
Q 014631          119 KQAIQVILTVLA---------RPG-ANILLPKPGFPLYEANA-RHTR------------LEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus       119 ~~al~~~~~~l~---------~~g-d~Vl~~~p~y~~~~~~~-~~~g------------~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      ++|+..+++.+.         .+| |+|++.+|+|+++...+ ...|            .++..++.       .|++++
T Consensus       132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l  204 (433)
T 1z7d_A          132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL  204 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence            999999998753         467 99999999999865433 3223            12333332       289999


Q ss_pred             Hhhh-ccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccc
Q 014631          176 EALA-DENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM  252 (421)
Q Consensus       176 ~~~~-~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  252 (421)
                      ++.+ .++++++ +++| +|++|.+ ++++++++|.++|++||+++|+||+|+++.+.|... .+...+...+++   ||
T Consensus       205 e~~l~~~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di~---t~  279 (433)
T 1z7d_A          205 EEELKDPNVCAF-IVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---LL  279 (433)
T ss_dssp             HHHHTSTTEEEE-EECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EE
T ss_pred             HHHhCCCCEEEE-EEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCEE---EE
Confidence            9988 4556554 5566 5778975 688899999999999999999999999876655432 222222222232   89


Q ss_pred             ccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 014631          253 SKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD  330 (421)
Q Consensus       253 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  330 (421)
                      ||.++ +| +|+||++++        +++++.+.... ..+.+.+++++.++.++|+...+   ++..++++++++++.+
T Consensus       280 sK~l~-~G~~~~G~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~  347 (433)
T 1z7d_A          280 GKALS-GGHYPISAVLAN--------DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLE  347 (433)
T ss_dssp             CGGGG-TTSSCCEEEEEC--------HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred             Ccccc-CCCCCeEEEEEC--------HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence            99987 78 999999996        35666555432 23457788888888888864222   2345566667777777


Q ss_pred             HhhcC----CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHH
Q 014631          331 RIKEI----PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALE  404 (421)
Q Consensus       331 ~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~  404 (421)
                      .|+++    |.+. . .+..|.++|+.++...    .+..++...+ .++||.+.|+.    .+++|++++  .++++++
T Consensus       348 ~L~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~----~~~~~~~~~l-~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~  416 (433)
T 1z7d_A          348 NLKRELKDSKIVR-D-VRGKGLLCAIEFKNEL----VNVLDICLKL-KENGLITRDVH----DKTIRLTPPLCITKEQLD  416 (433)
T ss_dssp             HHHHHHTTCTTEE-E-EEEETTEEEEEECTTT----CCHHHHHHHH-HHTTEECCEET----TTEEEECCCTTCCHHHHH
T ss_pred             HHHHHHHhCCCeE-E-EEeeeeEEEEEEccCh----hHHHHHHHHH-HHCCeEEecCC----CCEEEEECCcCCCHHHHH
Confidence            76643    3222 1 1334678888886320    1355677666 45799999862    578999886  7999999


Q ss_pred             HHHHHHHHHHHHhhh
Q 014631          405 EGLGRIKAFCQRHAK  419 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~  419 (421)
                      +++++|+++++++.+
T Consensus       417 ~~l~~l~~~l~~~~~  431 (433)
T 1z7d_A          417 ECTEIIVKTVKFFDE  431 (433)
T ss_dssp             HHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999987754

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.97  E-value=8.7e-31  Score=255.12  Aligned_cols=331  Identities=17%  Similarity=0.165  Sum_probs=221.7

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----CCCe---E
Q 014631           64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----PGAN---I  136 (421)
Q Consensus        64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~---V  136 (421)
                      +.+.+++.+.+.... ..|++..+..+++++++++++        .+++++|+|+++|++.++.++.+    +||+   |
T Consensus        55 ~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~v  125 (467)
T 1ax4_A           55 NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPV  125 (467)
T ss_dssp             CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred             HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceE
Confidence            566777777766543 367777788899999999983        26899999999999999999988    9998   9


Q ss_pred             EEcCCCCcchHHHHhhcCceeEeeeccC----C----CCccCCHHHHHhhhcc----CceEEEEeCCCCCc-ccccCHHH
Q 014631          137 LLPKPGFPLYEANARHTRLEIRHFDLLP----E----KGWEVDLDGLEALADE----NTVAMVIVNPGNPC-GNVFTYQQ  203 (421)
Q Consensus       137 l~~~p~y~~~~~~~~~~g~~~~~~~~~~----~----~~~~~d~e~l~~~~~~----~~~~i~~~~p~npt-G~~~~~~~  203 (421)
                      +++.+.|..+...+...|.+++.++...    .    .++.+|+++|++.+++    ++++|++++|+||| |.+++.++
T Consensus       126 iv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~  205 (467)
T 1ax4_A          126 FISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSN  205 (467)
T ss_dssp             EEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHH
T ss_pred             EEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhH
Confidence            9986666666777888898877665421    1    1346899999998864    68899999999999 89999999


Q ss_pred             HHHHHHHHHhcCcEEEEcccccc--c--------ccCCCCccccc-ccCCCCCEEEEcccccccCCC-CceEEEEEeeCC
Q 014631          204 LQKIAEKARKLGIMVISDEVYDH--L--------TFGSTPYVRMG-VFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDP  271 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~--~--------~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~  271 (421)
                      +++|+++|++||+++|+|+++..  .        .+.+.....+. ....... +++.|+||+++++ |   |+++++++
T Consensus       206 l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~d~  281 (467)
T 1ax4_A          206 LKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAIRDN  281 (467)
T ss_dssp             HHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEESSC
T ss_pred             HHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc---eEEEeCCH
Confidence            99999999999999999998654  1        22232211111 0000011 4567999998765 3   66666532


Q ss_pred             CcchhHHHHHHHHhhhcc------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631          272 SGILQELRIVDSIKGYLN------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE  345 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~  345 (421)
                      .      ++++.+.....      ...+.+.....++...++...+   ++..++..++++++.+.|++ +++. +..|.
T Consensus       282 ~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~  350 (467)
T 1ax4_A          282 E------EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE-AGIP-IQYPT  350 (467)
T ss_dssp             H------HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH-TTCC-BCSSC
T ss_pred             H------HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh-CCCC-cccCC
Confidence            0      24444332211      1112233333333334432211   11222333666778888877 4777 44788


Q ss_pred             ceeEEEEecCccc--cc-CCCChHHHHHHHHhhcCeeEEe-CCCC-------C-----CCCeEEEEec---CCHHHHHHH
Q 014631          346 GSMFVMVKLNLSL--LE-GISDDMEFALQLAKEESVIVLP-GMAV-------G-----MKNWLRITFA---IEPSALEEG  406 (421)
Q Consensus       346 ~~~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~v~~-g~~~-------~-----~~~~iRi~~~---~~~e~l~~~  406 (421)
                      +++++|+.+....  .+ ...+..+++..|+.++||.+.| |..+       +     ..+++|++++   +++++++++
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~  430 (467)
T 1ax4_A          351 GGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYI  430 (467)
T ss_dssp             CSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHH
T ss_pred             CceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHH
Confidence            8899998831100  00 0012456777665888999999 5431       1     1378999997   689999999


Q ss_pred             HHHHHHHHHHhh
Q 014631          407 LGRIKAFCQRHA  418 (421)
Q Consensus       407 ~~~l~~~~~~~~  418 (421)
                      +++|.+++++..
T Consensus       431 ~~~l~~~~~~~~  442 (467)
T 1ax4_A          431 ADALIGLKEKFA  442 (467)
T ss_dssp             HHHHHTTHHHHT
T ss_pred             HHHHHHHHHhhh
Confidence            999999987753

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.97  E-value=1.1e-29  Score=244.70  Aligned_cols=330  Identities=13%  Similarity=0.104  Sum_probs=232.4

Q ss_pred             CCCeeeccCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           43 PRPIIPLGHGDPSAFPCFR-TTPVAADAVVDAVRSAEFD--CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      |..++||..|.+..  +++ .+|.+.+++.+++++....  .| +.....++++.++++++        .+++++++|++
T Consensus        75 g~~ylD~~sg~~~~--~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g--------~~~v~~~~sGs  143 (439)
T 2oat_A           75 GRKYFDFLSSYSAV--NQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLFN--------YHKVLPMNTGV  143 (439)
T ss_dssp             CCEEEESSGGGGTT--TTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHHT--------CSEEEEESSHH
T ss_pred             CCEEEEccCCcccc--cCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhcC--------CCEEEEeCCHH
Confidence            67788998875431  234 7899999999998763211  23 23345688888888762        57899999999


Q ss_pred             HHHHHHHHHhc---------CCC-CeEEEcCCCCcchHH-HHhhcC------------ceeEeeeccCCCCccCCHHHHH
Q 014631          120 QAIQVILTVLA---------RPG-ANILLPKPGFPLYEA-NARHTR------------LEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus       120 ~al~~~~~~l~---------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      +|+..+++.+.         .+| |+|++.+|+|+++.. .....|            .++..++.       .|+++++
T Consensus       144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le  216 (439)
T 2oat_A          144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALE  216 (439)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHH
Confidence            99999998864         357 899999999988644 334334            23444432       2899999


Q ss_pred             hhhc-cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccc
Q 014631          177 ALAD-ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS  253 (421)
Q Consensus       177 ~~~~-~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  253 (421)
                      +.+. ++++++ +++| +|++|. .++.+++++|.++|++||+++|+||+|.++.+.|... .+...+...+++   |||
T Consensus       217 ~~l~~~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~s  291 (439)
T 2oat_A          217 RALQDPNVAAF-MVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLG  291 (439)
T ss_dssp             HHTTSTTEEEE-EECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EEC
T ss_pred             HHhCCCCEEEE-EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Eec
Confidence            9884 555544 5566 567896 4688999999999999999999999998876666432 222222222232   899


Q ss_pred             cccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631          254 KRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       254 K~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      |.++ +| +|+||++++        +++++.+.... ..+.+.+++++.++.++++...+   ++..++++++++++.+.
T Consensus       292 K~l~-~G~~~~G~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~  359 (439)
T 2oat_A          292 KALS-GGLYPVSAVLCD--------DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNE  359 (439)
T ss_dssp             GGGG-TTSSCCEEEEEC--------HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred             cccc-CCCCCeEEEEEC--------HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHH
Confidence            9986 58 899999996        35666555432 23456788888888888864222   24567788889999999


Q ss_pred             hhcCCCcccc-CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHH
Q 014631          332 IKEIPCITCP-RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLG  408 (421)
Q Consensus       332 l~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~  408 (421)
                      |+++ ++..+ ..+..|.++++.++...  + .+..++...+ .++||.+.|+.    .+++|++++  .++++++++++
T Consensus       360 L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l~~~l-~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~  430 (439)
T 2oat_A          360 LMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKVCLRL-RDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIE  430 (439)
T ss_dssp             HTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHHHHHH-HHTTEECCBSS----SSEEEECCCTTCCHHHHHHHHH
T ss_pred             HHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHHHHHH-HHCCeEEecCC----CCEEEEECccCCCHHHHHHHHH
Confidence            9876 43311 12334678888886421  0 1356677666 45799999852    578999886  79999999999


Q ss_pred             HHHHHHHH
Q 014631          409 RIKAFCQR  416 (421)
Q Consensus       409 ~l~~~~~~  416 (421)
                      +|++++++
T Consensus       431 ~l~~~l~~  438 (439)
T 2oat_A          431 IINKTILS  438 (439)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99998864

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.97  E-value=2.2e-29  Score=241.69  Aligned_cols=323  Identities=16%  Similarity=0.168  Sum_probs=224.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCC----HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCe
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGI----LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGAN  135 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~----~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~  135 (421)
                      +.++.+.+++.+.+.......|++..|.    .++++.+++++    |  .+  +++++++|++++..++.++ +++||+
T Consensus        13 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g--~~--~~i~~~~gt~al~~~~~~~~~~~gd~   84 (418)
T 2c81_A           13 QHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----G--VP--YCVPTTSGSTALMLALEALGIGEGDE   84 (418)
T ss_dssp             CCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----T--CS--EEEEESCHHHHHHHHHHHTTCCTTCE
T ss_pred             CCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----C--CC--cEEEeCCHHHHHHHHHHHcCCCCcCE
Confidence            4579999999999987544447776674    45555555555    3  22  5677778899999999999 899999


Q ss_pred             EEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631          136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG  215 (421)
Q Consensus       136 Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~  215 (421)
                      |+++.|+|+++...+...|++++.+++++ +++.+|++++++.+++++++|++   +||||..   .++++|.++|+++|
T Consensus        85 Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~---~~~~~i~~~~~~~~  157 (418)
T 2c81_A           85 VIVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIP---VHLFGSM---ANMDEINEIAQEHN  157 (418)
T ss_dssp             EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECC---BCCTTCC---CCHHHHHHHHHHTT
T ss_pred             EEECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEE---eCCcCCc---ccHHHHHHHHHHCC
Confidence            99999999999999999999999998754 35679999999999888887765   4589987   56899999999999


Q ss_pred             cEEEEcccccccc-cCCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc-
Q 014631          216 IMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS-  291 (421)
Q Consensus       216 ~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-  291 (421)
                      +++|+|++|+.+. +.+..   +..+.    .+.+.||  ||.++. | |+||+++++       +++.+.+....... 
T Consensus       158 ~~li~D~a~~~~~~~~~~~---~~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~~~~~~  221 (418)
T 2c81_A          158 LFVIEDCAQSHGSVWNNQR---AGTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQLRADSR  221 (418)
T ss_dssp             CEEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHHBTTE
T ss_pred             CEEEEECcccccCccCCEe---ccccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHHHHhCc
Confidence            9999999999875 44321   22221    1667777  999876 7 999999853       34555554332110 


Q ss_pred             ------------cC-----Cc--------hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          292 ------------SG-----PA--------TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       292 ------------~~-----~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                                  ..     +.        ...+.++.  +.  ....+++..++.+++++++.+.|.++|++.+...+.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~--~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  297 (418)
T 2c81_A          222 VYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAIL--LD--QLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ  297 (418)
T ss_dssp             EECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHH--HH--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred             cccccccccccchhhccccccccCcCCCcCHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence                        00     00        01122111  11  1233566777778889999999998888874324554


Q ss_pred             -eeEEE----EecCcccccCCCChHHHHHHHHhhcCee---EEeCCCCC----------------------------C--
Q 014631          347 -SMFVM----VKLNLSLLEGISDDMEFALQLAKEESVI---VLPGMAVG----------------------------M--  388 (421)
Q Consensus       347 -~~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~gv~---v~~g~~~~----------------------------~--  388 (421)
                       +...|    +.++..... ..+..++...|.+++||.   +.+|....                            .  
T Consensus       298 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (418)
T 2c81_A          298 VSRQTYYGYVFRFDPVKFG-GLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYP  376 (418)
T ss_dssp             EEECCCSEEEEEECGGGTT-TCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCH
T ss_pred             CcccccEEEEEEEcccccc-ccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCCh
Confidence             33222    555521000 114566776665444999   88875220                            0  


Q ss_pred             ------CCeEEEEec--C-CHHHHHHHHHHHHHHHHHhhh
Q 014631          389 ------KNWLRITFA--I-EPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       389 ------~~~iRi~~~--~-~~e~l~~~~~~l~~~~~~~~~  419 (421)
                            .+.+|++++  + +++|++++++.|+++++++..
T Consensus       377 ~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~  416 (418)
T 2c81_A          377 VSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCV  416 (418)
T ss_dssp             HHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC-
T ss_pred             HHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhcc
Confidence                  147999997  7 999999999999999887654

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.97  E-value=6.5e-30  Score=245.19  Aligned_cols=320  Identities=12%  Similarity=0.082  Sum_probs=227.4

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS--------PSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      ...++|+.+.+.     +.|+.+.+++.+.+... ...+.        ....+.++++.+++++    |  +++++|++|
T Consensus        27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~   94 (416)
T 1qz9_A           27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLI----G--ARDGEVVVT   94 (416)
T ss_dssp             TTCEECCTTTSC-----CCBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTT----T--CCTTSEEEC
T ss_pred             CCeEeecCCCcC-----CCcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHc----C--CCcccEEEe
Confidence            467888887643     56788999999988752 11111        0123356666666665    3  567899999


Q ss_pred             CCHHHHHHHHHHHhc------CCCCeEE-EcCCCCcchHHH----Hhhc--CceeEeeeccCCCCccCCHHHHHhhhccC
Q 014631          116 AGCKQAIQVILTVLA------RPGANIL-LPKPGFPLYEAN----ARHT--RLEIRHFDLLPEKGWEVDLDGLEALADEN  182 (421)
Q Consensus       116 ~g~~~al~~~~~~l~------~~gd~Vl-~~~p~y~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~  182 (421)
                      +|+++++..++.++.      ++||+|+ ++.+.|.++...    +...  |++++.++.         ++++++.++++
T Consensus        95 ~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~  165 (416)
T 1qz9_A           95 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQD  165 (416)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTT
T ss_pred             CChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCC
Confidence            999999998888876      8999754 455677655433    2233  888887764         67888888888


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++++++++|+||||.+++   +++|.++|++||+++|+|++|+.    |.....+..++.   .+++.|+||++ .+|.+
T Consensus       166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~~---d~~~~s~~K~l-~~g~~  234 (416)
T 1qz9_A          166 TAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAGA---DYAIGCTYKYL-NGGPG  234 (416)
T ss_dssp             EEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHTC---SEEEECSSSTT-CCCTT
T ss_pred             ceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc----cCcCCChhhcCC---CEEEecCcccC-CCCCC
Confidence            999999999999999977   78999999999999999999985    222222323322   37788999995 45677


Q ss_pred             E-EEEEeeCCCcchhHHHHHHHHhhh------------------------cccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          263 L-GWLVTSDPSGILQELRIVDSIKGY------------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       263 ~-G~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      + |++++++.        +.+.+...                        ....++++...+.++.++++.....++++.
T Consensus       235 ~~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~  306 (416)
T 1qz9_A          235 SQAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASL  306 (416)
T ss_dssp             CCCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred             CeEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence            7 99999642        22222221                        011235677777777777764333567888


Q ss_pred             HHHHHHHHHHHHHHhhcC-C--CccccCCCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCC
Q 014631          318 VDILRDTADICYDRIKEI-P--CITCPRKPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN  390 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~-~--g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~  390 (421)
                      .++++++++++.+.|+++ |  ++.+. .+.    .+.++|+.++        +..++...| .++||.+...    ..+
T Consensus       307 ~~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~~~~l~~~l-~~~gi~~~~~----~~~  372 (416)
T 1qz9_A          307 RRKSLALTDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPR  372 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTT
T ss_pred             HHHHHHHHHHHHHHHHhhccCCCeEEe-CCCCHHHcCCEEEEecC--------CHHHHHHHH-HhCCcEeccC----CCC
Confidence            899999999999999875 6  77733 443    3557787775        245666665 5679987542    357


Q ss_pred             eEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631          391 WLRITFA---IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       391 ~iRi~~~---~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ++|++++   ++++++++++++|++++++.
T Consensus       373 ~lRis~~~~~~t~~~i~~~~~~l~~~~~~~  402 (416)
T 1qz9_A          373 IMRFGFTPLYTTFTEVWDAVQILGEILDRK  402 (416)
T ss_dssp             EEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence            8999986   58999999999999998764

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.6e-30  Score=251.26  Aligned_cols=334  Identities=13%  Similarity=0.082  Sum_probs=242.0

Q ss_pred             CCcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC-----C
Q 014631           61 RTTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR-----P  132 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~  132 (421)
                      +.++.+.+++.+.+...   +...|....+..++++.+++++.+.+|.+.+++++++++|+++++..++.++++     +
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~  154 (497)
T 3mc6_A           75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR  154 (497)
T ss_dssp             CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence            45578888888887652   223455556677999999999999888666688999999999999999998864     5


Q ss_pred             C---CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHH
Q 014631          133 G---ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE  209 (421)
Q Consensus       133 g---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~  209 (421)
                      |   |+|+++.++|.++...+...|++++.+++++ +++.+|++++++++++++++|++++|+||||.+.+   +++|.+
T Consensus       155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~  230 (497)
T 3mc6_A          155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK  230 (497)
T ss_dssp             CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred             CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence            6   8999999999999999999999999999764 35679999999999989999999999999999955   778999


Q ss_pred             HHHhcCcEEEEcccccccccC-----CCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          210 KARKLGIMVISDEVYDHLTFG-----STPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       210 ~~~~~~~~li~De~~~~~~~~-----~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      +|++||+++|+|++|+.+...     +.+.. ++. ....+-.+++.|++|+ +.+|.++|++++++        +....
T Consensus       231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~  300 (497)
T 3mc6_A          231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM  300 (497)
T ss_dssp             HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred             HHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-ccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence            999999999999999865421     11111 111 1111223777899998 56778899999864        12222


Q ss_pred             Hhhhcc-c-----------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEE
Q 014631          284 IKGYLN-I-----------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFV  350 (421)
Q Consensus       284 ~~~~~~-~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~  350 (421)
                      ...... .           .++.+.....++..++......++++..++..++++++.+.|++ +|++.++..|..+ ++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~-~v  379 (497)
T 3mc6_A          301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS-VI  379 (497)
T ss_dssp             TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS-EE
T ss_pred             hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee-EE
Confidence            211110 0           01111122222333333223466788888999999999999998 6998855345444 44


Q ss_pred             EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631          351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ++..+.      .+..++...| .++||.+.++..   +..+|++++ .+++++++++++|++++++..+
T Consensus       380 ~~~~~~------~~~~~l~~~L-~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~  439 (497)
T 3mc6_A          380 SFSSKT------LNIHELSDRL-SKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELKS  439 (497)
T ss_dssp             EEECTT------TTHHHHHHHH-HTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred             EEeCCC------CCHHHHHHHH-HhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence            444432      1456666655 567999887643   357899988 7889999999999999987754

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.97  E-value=5.3e-30  Score=249.66  Aligned_cols=346  Identities=12%  Similarity=0.047  Sum_probs=238.4

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEc
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSP--DDVYLT  115 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~--~~i~~~  115 (421)
                      .+.|+|..+.      .+.++.+++++.+.+.+....+      |+...+..++++.+.+++.+.+|...+.  .+|+++
T Consensus        44 ~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~  117 (483)
T 1rv3_A           44 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY  117 (483)
T ss_dssp             HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             hcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence            4678897664      2468999999988876532112      3333345688888888888888754221  247788


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH--------HhhcCceeEeeec--cCCCCccCCHHHHHhhhc-cCce
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEAN--------ARHTRLEIRHFDL--LPEKGWEVDLDGLEALAD-ENTV  184 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~~~--~~~~~~~~d~e~l~~~~~-~~~~  184 (421)
                      +|+ +++..++.++++|||+|+++++.|.++...        +...|..+..++.  ++ +++.+|+|++++.+. ++++
T Consensus       118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk  195 (483)
T 1rv3_A          118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK  195 (483)
T ss_dssp             SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence            877 888888889999999999999998876532        2334422444443  43 357799999999987 7889


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631          185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL  263 (421)
Q Consensus       185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  263 (421)
                      +|++ +++|++ .+++   +++|.++|+++|+++|+|++|.. +...+....++.  .   ..+++.|+||+|  .|+|.
T Consensus       196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~---~div~~s~~K~l--~Gprg  263 (483)
T 1rv3_A          196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H---CHVVTTTTHKTL--RGCRA  263 (483)
T ss_dssp             EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T---CSEEEEESSGGG--CCCSC
T ss_pred             EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C---CcEEEecCcccC--CCCCc
Confidence            8888 888888 7755   88999999999999999999874 333333222222  1   127789999985  57888


Q ss_pred             EEEEeeCCCcchhHH-------HHHHHHhhhc--ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          264 GWLVTSDPSGILQEL-------RIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       264 G~~~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      ||+++++........       ++.+.+....  ...++++.....++..++......++++..+++.++++++.+.|.+
T Consensus       264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~  343 (483)
T 1rv3_A          264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE  343 (483)
T ss_dssp             EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence            999998642100000       1223333221  1134566666666666665433457788899999999999999998


Q ss_pred             CCCccccCCCC-ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE----eCCCCC-CCCeEEEEec--CC----HHH
Q 014631          335 IPCITCPRKPE-GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL----PGMAVG-MKNWLRITFA--IE----PSA  402 (421)
Q Consensus       335 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~~~-~~~~iRi~~~--~~----~e~  402 (421)
                      + |+.++ .+. ++++.|+.+....    .+..++ ..+|++.||.+.    ||..+. ..+++||+++  ++    +++
T Consensus       344 ~-g~~~~-~~~~~~~~~~v~~~~~g----~~~~~~-~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed  416 (483)
T 1rv3_A          344 L-GYKIV-TGGSDNHLILVDLRSKG----TDGGRA-EKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD  416 (483)
T ss_dssp             T-TCEEG-GGSCSSSEEEEEGGGGT----CCHHHH-HHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred             c-CCEec-cCCCCCceEEEeccCCC----CCHHHH-HHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence            8 88744 342 3467888886421    134444 456688999999    876321 2578999998  46    899


Q ss_pred             HHHHHHHHHHHHHH
Q 014631          403 LEEGLGRIKAFCQR  416 (421)
Q Consensus       403 l~~~~~~l~~~~~~  416 (421)
                      ++++++.|.++++.
T Consensus       417 i~~~~~~l~~~l~~  430 (483)
T 1rv3_A          417 FQKVAHFIHRGIEL  430 (483)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998875

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.97  E-value=5.5e-30  Score=248.63  Aligned_cols=349  Identities=15%  Similarity=0.105  Sum_probs=230.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|++++||..|......+ ..+|.+++|+.+++++... .|....+..+.+..+++.+.+..+  .+.++|++++||++|
T Consensus        53 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGseA  128 (472)
T 3hmu_A           53 EGEEILDAMAGLWCVNIG-YGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSEA  128 (472)
T ss_dssp             TCCEEECTTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHH
Confidence            478899998874332222 3689999999999987431 232222334555666666655543  456799999999999


Q ss_pred             HHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCc------------eeEeeeccC--C-CCccCC-------
Q 014631          122 IQVILTVLAR--------PGANILLPKPGFPLYEANARHTRL------------EIRHFDLLP--E-KGWEVD-------  171 (421)
Q Consensus       122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d-------  171 (421)
                      +..+++.+.+        ++++|++.+++|+++...+...+.            .+..++.+.  . +++ .+       
T Consensus       129 ~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~  207 (472)
T 3hmu_A          129 NDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLA  207 (472)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHH
Confidence            9999998864        358999999999998666554433            233343211  0 111 23       


Q ss_pred             -HHHHHhhhcc---CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC
Q 014631          172 -LDGLEALADE---NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP  245 (421)
Q Consensus       172 -~e~l~~~~~~---~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  245 (421)
                       +++|++.+..   +..++++++| ++++|.+. +++.+++|.++|++||+++|+||+|+++.+.|..+ ....++...+
T Consensus       208 ~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~pd  286 (472)
T 3hmu_A          208 RARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIRPH  286 (472)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCCCc
Confidence             6788877752   3344556655 66777654 88899999999999999999999999987776532 2223333223


Q ss_pred             EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631          246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR  322 (421)
Q Consensus       246 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  322 (421)
                      ++   +|||+++.+|+|+|+++++        +++++.+...  . ..+.+.++++++++.++|+...+   ++..++++
T Consensus       287 i~---t~sK~l~gg~~plG~v~~~--------~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~  352 (472)
T 3hmu_A          287 IM---TIAKGLSSGYAPIGGSIVC--------DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVR  352 (472)
T ss_dssp             EE---EECGGGTTTSSCCEEEEEE--------HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHH
T ss_pred             ee---eechhhhcCCcceEEEEEC--------HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHH
Confidence            33   6889977666999999996        4677877322  1 23457889999999888874222   23344445


Q ss_pred             -HHHHHHHHHhhc---CCCccccCCCCceeEEEEecCcccccC-------CCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631          323 -DTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLEG-------ISDDMEFALQLAKEESVIVLPGMAVGMKNW  391 (421)
Q Consensus       323 -~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  391 (421)
                       ++.+++++.|++   +|.+..+ .+ .|.++++.+.......       ......+...+ .++||.+.|+.     ++
T Consensus       353 ~~~~~~l~~~L~~l~~~~~v~~v-r~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~  424 (472)
T 3hmu_A          353 NVAAPYLKEKWEALTDHPLVGEA-KI-VGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG-----DR  424 (472)
T ss_dssp             HTHHHHHHHHHHGGGGSTTEEEE-EE-ETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET-----TE
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEE-Ee-cCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC-----CE
Confidence             555555555543   4444422 33 3556667764321000       00033455554 56799999863     79


Q ss_pred             EEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          392 LRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +|++++  .+++++++++++|++++++..
T Consensus       425 iRi~p~~~~t~e~i~~~l~~l~~~l~~~~  453 (472)
T 3hmu_A          425 MIISPPLVITPAEIDEMFVRIRKSLDEAQ  453 (472)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999965  899999999999999987754

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.97  E-value=1.6e-29  Score=242.61  Aligned_cols=339  Identities=14%  Similarity=0.068  Sum_probs=223.5

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      ..++|..+.      .+.++.+.+++.+.+.+.....|+      ......++++.+.+++.+.+|  .++++|++++| 
T Consensus        26 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG-   96 (417)
T 3n0l_A           26 EGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG-   96 (417)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-
T ss_pred             cCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-
Confidence            457775443      245899999998887543222232      223335666644445544444  45667877777 


Q ss_pred             HHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCC
Q 014631          119 KQAIQVILTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNP  194 (421)
Q Consensus       119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~np  194 (421)
                      ++++..++.+++++||+|++++|+|.++..   .....|..+..++++.++++.+|++++++.++ +++++|++++|+| 
T Consensus        97 t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~-  175 (417)
T 3n0l_A           97 SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY-  175 (417)
T ss_dssp             HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC-
T ss_pred             HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc-
Confidence            799999999999999999999999987644   33334444333333333556799999999887 5788888878776 


Q ss_pred             cccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCc
Q 014631          195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG  273 (421)
Q Consensus       195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  273 (421)
                       |..++   +++|.++|++||+++|+|++|.. ..+.+.....+.     ...+++.|+||+|  +|.|+||+++++   
T Consensus       176 -G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~---  241 (417)
T 3n0l_A          176 -ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND---  241 (417)
T ss_dssp             -CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC---
T ss_pred             -CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC---
Confidence             77766   88999999999999999999743 333333222221     1237889999985  788899999863   


Q ss_pred             chhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631          274 ILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM  351 (421)
Q Consensus       274 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~  351 (421)
                          +++.+.+......  .++++...+.++..++......++++..++++++++++.+.|.+. |+.+...+..+.++|
T Consensus       242 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~  316 (417)
T 3n0l_A          242 ----EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHLVL  316 (417)
T ss_dssp             ----HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEE
T ss_pred             ----HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceEEE
Confidence                3466666554332  234555555565555543234567888889999999999999884 777332234566888


Q ss_pred             EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC------CCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Q 014631          352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM------KNWLRITFA------IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~iRi~~~------~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +.++...     .+.+.+..+++++||.+.++..+..      ...+|++++      .+++++++++++|.+++++.
T Consensus       317 ~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~  389 (417)
T 3n0l_A          317 MSFLDRE-----FSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV  389 (417)
T ss_dssp             EECTTSS-----SCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             EEcccCC-----CCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence            8775321     1234455566888999987654322      367999986      35799999999999998653

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.97  E-value=9e-30  Score=240.72  Aligned_cols=324  Identities=15%  Similarity=0.179  Sum_probs=230.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +.++++|+.+.|.      .++ +.+++.+.+...   .|.+..+..++|+.++++++        .+++++++||++++
T Consensus         5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~   66 (374)
T 3uwc_A            5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL   66 (374)
T ss_dssp             CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred             cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence            5678899988855      234 888888887763   56677788999999999983        23789999999999


Q ss_pred             HHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ..++.++ .++||+|+++.|+|+++...++..|.+++.++++  +++.+|++++++.+++++++++   |+||||...+ 
T Consensus        67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~-  140 (374)
T 3uwc_A           67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD-  140 (374)
T ss_dssp             HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred             HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence            9999999 8999999999999999999999999999999876  4567899999999988777665   8999999854 


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                        +++|.++|++||+++|+|++|+.+. +.+.   ....+.    .+++.|+|  |+++.+|. .|++++++       +
T Consensus       141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~---~~~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~  203 (374)
T 3uwc_A          141 --MPALAKIAKKHNLHIVEDACQTILGRINDK---FVGSWG----QFACFSLHPLKNLNVWSD-AGVIITHS-------D  203 (374)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS----SEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred             --HHHHHHHHHHcCCEEEEeCCCccCceeCCe---eccccc----cEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence              8889999999999999999998743 2221   111111    26677866  99765465 78888754       3


Q ss_pred             HHHHHHhhhccc-------------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC-ccccCCC
Q 014631          279 RIVDSIKGYLNI-------------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC-ITCPRKP  344 (421)
Q Consensus       279 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~~~~  344 (421)
                      ++.+.+......             ....+.+...+....     ...+++..++.+++.+++.+.|+++++ +.....+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  278 (374)
T 3uwc_A          204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRL-----MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR  278 (374)
T ss_dssp             HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHH-----GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred             HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence            455555443210             011122222222222     234566777888889999999998876 7633333


Q ss_pred             CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-------------C----------CCeEEEEec--CC
Q 014631          345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-------------M----------KNWLRITFA--IE  399 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-------------~----------~~~iRi~~~--~~  399 (421)
                      .++...|..+....    .+..++...| .++||.+.++....             .          ...+|++++  ++
T Consensus       279 ~~~~~~~~~~~~~~----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t  353 (374)
T 3uwc_A          279 EGVYHVFHIYVLRV----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLT  353 (374)
T ss_dssp             TTEECCCSSEEEEE----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSC
T ss_pred             CCCceeeEEEEEEc----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCC
Confidence            33333322221110    1345565554 67799999886110             0          167999987  79


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 014631          400 PSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~  417 (421)
                      ++|++++++.|++++++.
T Consensus       354 ~edi~~~~~~l~~~l~~~  371 (374)
T 3uwc_A          354 EEEINYIIKKVREFYLEK  371 (374)
T ss_dssp             HHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999998764

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.97  E-value=3.9e-30  Score=250.25  Aligned_cols=333  Identities=11%  Similarity=0.052  Sum_probs=231.6

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc----CC---CCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS----AE---FDCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~---~~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      +++++|+.+...     +.|+.+.+++.+.+..    +.   ...|. ......++++.+++++      ++++++|++|
T Consensus        66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t  134 (465)
T 3e9k_A           66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALM  134 (465)
T ss_dssp             CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEEC
T ss_pred             CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEE
Confidence            467888877644     3445555555554432    11   11121 1233467888888887      4668999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCe---EEEcCCCCcchH----HHHhhcCceeEe--eecc-CCCCccCCHHHHHhhhc---cC
Q 014631          116 AGCKQAIQVILTVLARPGAN---ILLPKPGFPLYE----ANARHTRLEIRH--FDLL-PEKGWEVDLDGLEALAD---EN  182 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~---Vl~~~p~y~~~~----~~~~~~g~~~~~--~~~~-~~~~~~~d~e~l~~~~~---~~  182 (421)
                      +|+++++++++.++.++|+.   |+++.|+|++..    ..++..|+++..  +.+. .++++.+|++++++.++   ++
T Consensus       135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~  214 (465)
T 3e9k_A          135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS  214 (465)
T ss_dssp             SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred             CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence            99999999999999876655   999999998743    366678887532  1221 23456789999999886   57


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++++++++|+||||.+++   +++|.++|++||+++|+|++|+.    |.....+..++.   .+++.|++|.+..+..+
T Consensus       215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~----g~~~~~~~~~~~---D~~~~s~~K~l~~gp~~  284 (465)
T 3e9k_A          215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV----GNVELYLHDWGV---DFACWCSYKYLNAGAGG  284 (465)
T ss_dssp             EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTC---CEEEECSSSTTCCCTTC
T ss_pred             eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCchhhcCC---CEEEECcccccccCCCc
Confidence            889999999999999976   68888999999999999999986    332233333333   37888999997433336


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhh--------------------------cccccCCchHHHHHHHHHhhccchhHHHH
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGY--------------------------LNISSGPATFVQGAVPQIFKNTKEDFFSK  316 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  316 (421)
                      +|++++++.        +.+.+...                          ....++++.....++.++++...+..+++
T Consensus       285 ~g~l~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~  356 (465)
T 3e9k_A          285 IAGAFIHEK--------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKA  356 (465)
T ss_dssp             CCEEEECGG--------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred             eEEEEEcHH--------HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHH
Confidence            899988632        21111100                          00113667777777777776533445788


Q ss_pred             HHHHHHHHHHHHHHHhhcC----------CCccccCCCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          317 IVDILRDTADICYDRIKEI----------PCITCPRKPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~----------~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      ++++.+++++++.+.|+++          +++.+. .|.    .|.++++.++.       +..++...| .++||.+..
T Consensus       357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~~~~~~-------~~~~l~~~L-~~~Gi~v~~  427 (465)
T 3e9k_A          357 LRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLTITFSV-------PNKDVFQEL-EKRGVVCDK  427 (465)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEEEEECC-------TTCCHHHHH-HTTTEECEE
T ss_pred             HHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEEEEecC-------CHHHHHHHH-HHCCEEEec
Confidence            9999999999999999874          688743 554    36678877762       234566655 566999874


Q ss_pred             CCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHHhh
Q 014631          383 GMAVGMKNWLRITF-A--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       383 g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +    .++++|+++ +  ++.++++++++.|++++++..
T Consensus       428 ~----~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~  462 (465)
T 3e9k_A          428 R----NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE  462 (465)
T ss_dssp             E----TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred             C----CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence            2    358999998 4  789999999999999987543

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.97  E-value=5.8e-30  Score=246.43  Aligned_cols=343  Identities=13%  Similarity=0.055  Sum_probs=228.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|.+++||..|......+ ..+|.+.+++.+++.+.... +.+.....+|++.+++++      + .++++++++||+++
T Consensus        51 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~~-~~~~~~~~~l~~~la~~~------~-~~~~v~~~~~Gsea  121 (429)
T 3k28_A           51 DGNEYIDYVLSWGPLIHG-HANDRVVEALKAVAERGTSF-GAPTEIENKLAKLVIERV------P-SIEIVRMVNSGTEA  121 (429)
T ss_dssp             TCCEEEESCGGGTTCTTC-BSCHHHHHHHHHHHHHCSCC-SSCCHHHHHHHHHHHHHS------T-TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCChhhcccC-CCCHHHHHHHHHHHhhCcCc-CCCCHHHHHHHHHHHHhC------C-CCCEEEEeCChHHH
Confidence            478899999887543322 36899999999999875432 334445567888888776      2 47899999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhc-CceeEeeeccCCCCcc------------CCHHHHHhhhcc--Cce
Q 014631          122 IQVILTVLAR--PGANILLPKPGFPLYEANARHT-RLEIRHFDLLPEKGWE------------VDLDGLEALADE--NTV  184 (421)
Q Consensus       122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~e~l~~~~~~--~~~  184 (421)
                      +..+++.+..  ++++|++.+++|+++...+... |.....++.....+..            -|++++++.+..  ...
T Consensus       122 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  201 (429)
T 3k28_A          122 TMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDI  201 (429)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGE
T ss_pred             HHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence            9999987754  5689999999999775444332 2222222211111110            178899888762  334


Q ss_pred             EEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          185 AMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       185 ~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++++++| +|++|.+. +++.+++|.++|++||+++|+||+|.++ +.|... ....++...+   +.||||.|+ +|+|
T Consensus       202 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~  275 (429)
T 3k28_A          202 ACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVTPD---LTCLGKVIG-GGLP  275 (429)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCCCS---EEEECGGGG-TTSC
T ss_pred             EEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCCCc---eehhhhhhc-CCCC
Confidence            4556666 45566554 6788999999999999999999999988 555322 2222222222   347899986 5999


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc----
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE----  334 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----  334 (421)
                      +||++++        +++++.+....    ..+.+.+++++.++.++++...    ++..++++++++++.+.|++    
T Consensus       276 iG~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~  343 (429)
T 3k28_A          276 VGAYGGK--------AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEK  343 (429)
T ss_dssp             CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEc--------HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999985        35766665422    2345788999999999997533    45566666666666666654    


Q ss_pred             CCCccccCCCCceeEEEEecCcccc--------cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLL--------EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG  406 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~  406 (421)
                      .+.+. . .+..|.++++.+.....        +.......++..+ .++||.+.|+.    .+.+|+++..++++++++
T Consensus       344 ~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~  416 (429)
T 3k28_A          344 HGIPH-H-INRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ----FEGLFLSTVHSDADIEAT  416 (429)
T ss_dssp             TTCCC-E-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST----TSCBCCCTTCCHHHHHHH
T ss_pred             CCCCE-E-EEeeccEEEEEEecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC----CCCEEEECCCCHHHHHHH
Confidence            33333 2 23345567776643210        0000124455554 56799999864    356888888999999999


Q ss_pred             HHHHHHHHHHhh
Q 014631          407 LGRIKAFCQRHA  418 (421)
Q Consensus       407 ~~~l~~~~~~~~  418 (421)
                      +++|++++++++
T Consensus       417 l~~l~~~l~~~~  428 (429)
T 3k28_A          417 IAAAEIAMSKLK  428 (429)
T ss_dssp             HHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHh
Confidence            999999998754

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.97  E-value=3.5e-30  Score=248.67  Aligned_cols=327  Identities=15%  Similarity=0.107  Sum_probs=220.7

Q ss_pred             CCeeeccCC-CCCCCCCCCCcHHHHHHHHHH---HhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           44 RPIIPLGHG-DPSAFPCFRTTPVAADAVVDA---VRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        44 ~~~i~l~~g-~~~~~~~~~~~~~v~~a~~~~---~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..+|+|+.| +|.    ++.++.+.++....   ........|. ..+.+ +++++++++.+.+|    .+++++++||+
T Consensus        89 ~~~i~l~~g~~~~----~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g----~~~~i~~~sGt  158 (464)
T 1ibj_A           89 TLLVNLDNKFDPF----DAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDK----ADRAFCFTSGM  158 (464)
T ss_dssp             HHHTCCCCSSCTT----CCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred             CeEEECCCCCCCC----CCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhC----CCeEEEECCHH
Confidence            457888887 433    45556666655432   1112234565 34544 67777777777665    23777888889


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631          120 QAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC  195 (421)
Q Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt  195 (421)
                      +++..++. ++++||+|++++|.|+++...    ++..|.+++.++.+       |++++++.++++++++++++|+|||
T Consensus       159 ~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Npt  230 (464)
T 1ibj_A          159 AALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPR  230 (464)
T ss_dssp             HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTT
T ss_pred             HHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCC
Confidence            99998885 778999999999999988653    56679898888752       7899999998889999999999999


Q ss_pred             ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC-CceEEEEEeeCCCcc
Q 014631          196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGI  274 (421)
Q Consensus       196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~  274 (421)
                      |.+++   +++|+++|++||+++|+|++|....    ...++. +   +..+++.|+||+|+.+ |+|+||+++++    
T Consensus       231 G~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~----  295 (464)
T 1ibj_A          231 QQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG----  295 (464)
T ss_dssp             CCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECS----
T ss_pred             CEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEECh----
Confidence            99985   8999999999999999999997632    111222 2   3458899999988754 89999999963    


Q ss_pred             hhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH----------HHhhcCCCccccCC
Q 014631          275 LQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY----------DRIKEIPCITCPRK  343 (421)
Q Consensus       275 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~l~~~~g~~~~~~  343 (421)
                         +++.+.+..... ...+.+++.+.++...++. ....+++..+......+++.          +.|+++|++.+. .
T Consensus       296 ---~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~-~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~  370 (464)
T 1ibj_A          296 ---EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT-MALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH-F  370 (464)
T ss_dssp             ---HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHH-T
T ss_pred             ---HHHHHHHHHHHHhcCCCCCHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHH-h
Confidence               246666655442 2345677888887777753 22222222222222223332          234444555522 3


Q ss_pred             CC---ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC------------CC----------CC-CCeEEEEec
Q 014631          344 PE---GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM------------AV----------GM-KNWLRITFA  397 (421)
Q Consensus       344 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------------~~----------~~-~~~iRi~~~  397 (421)
                      +.   .+.++++.++..     .....++.. ++..||.+.+|.            .+          +. ++++|++++
T Consensus       371 ~~~~g~g~~~~~~l~~~-----~~~~~~~~~-L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg  444 (464)
T 1ibj_A          371 SQAKGAGSVFSFITGSV-----ALSKHLVET-TKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG  444 (464)
T ss_dssp             TTCSCCCSEEEEECSCH-----HHHHHHHHH-CSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECC
T ss_pred             ccCCCCceEEEEEECCH-----HHHHHHHHh-cCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeC
Confidence            32   245777777421     012234444 455789888875            11          12 468999999


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 014631          398 IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~~~  416 (421)
                      .  |++++++++|++++++
T Consensus       445 ~--edi~~li~~L~~al~~  461 (464)
T 1ibj_A          445 I--EDVDDLISDLDIAFKT  461 (464)
T ss_dssp             S--SCHHHHHHHHHHHHHS
T ss_pred             C--CCHHHHHHHHHHHHhh
Confidence            8  8999999999998864

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.97  E-value=3.4e-29  Score=238.34  Aligned_cols=324  Identities=11%  Similarity=0.098  Sum_probs=230.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV  124 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~  124 (421)
                      ++|+|+.  |.      .++.+.+++.+.+...   .|.+..+..++|+.++++++        .+++++++|+++++..
T Consensus         9 ~~i~~~~--p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~   69 (393)
T 1mdo_A            9 DFLPFSR--PA------MGAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI   69 (393)
T ss_dssp             CCBCSCC--CC------CCHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred             cccccCC--CC------CCHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence            4677764  33      3467789999988764   24455678899999999984        2479999999999999


Q ss_pred             HHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          125 ILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       125 ~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      ++.++ .++||+|+++.|+|+++...++..|++++.+++++ +++.+|++++++.+++++++++++   ||||...   +
T Consensus        70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~---~  142 (393)
T 1mdo_A           70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPA---D  142 (393)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCC---C
T ss_pred             HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcC---C
Confidence            99999 89999999999999999999999999999998764 346799999999998778877654   4899985   4


Q ss_pred             HHHHHHHHHhcCcEEEEccccccc-ccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHL-TFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      +++|.++|+++|+++|+|++|+.+ .+.+.   ++   +.  ..+++.|+||..+++|.|+||+++++       +++.+
T Consensus       143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~  207 (393)
T 1mdo_A          143 LDAIYALGERYGIPVIEDAAHATGTSYKGR---HI---GA--RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFAD  207 (393)
T ss_dssp             HHHHHHHHHHHTCCBCEECTTCTTCEETTE---ET---TS--SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECccccCCeECCe---ec---CC--CCeEEEeCCCCCccccccceEEEeCC-------HHHHH
Confidence            889999999999999999999963 33322   11   11  34888999943344556899999853       34555


Q ss_pred             HHhhhcccc-------------------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          283 SIKGYLNIS-------------------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       283 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      .+.......                         ...+.+...++...++     .+++..++.+++++++.+.|.+++ 
T Consensus       208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~-  281 (393)
T 1mdo_A          208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-----KLDALNARRAAIAAQYHQAMADLP-  281 (393)
T ss_dssp             HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTSS-
T ss_pred             HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            554432110                         0123333333233332     255666677788889999998874 


Q ss_pred             ccccCCC-----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------------CC-------CCe
Q 014631          338 ITCPRKP-----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------------GM-------KNW  391 (421)
Q Consensus       338 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------------~~-------~~~  391 (421)
                      +.+...+     .+++++|+.++....  ..+..++...+ .++||.+.+|..+              ..       ...
T Consensus       282 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (393)
T 1mdo_A          282 FQPLSLPSWEHIHAWHLFIIRVDEARC--GITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI  358 (393)
T ss_dssp             CEECCCCSSCEECCCSCEEEECCHHHH--SSCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred             cccccCCCCCCCceeEEEEEEeccccc--ccCHHHHHHHH-HhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence            6532122     345678888863100  01355666655 5679999988754              11       247


Q ss_pred             EEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          392 LRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +|++++  +++++++++++.|+++++...
T Consensus       359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~~  387 (393)
T 1mdo_A          359 CSLPLFPDMTESDFDRVITALHQIAGQGS  387 (393)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred             EEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence            999998  799999999999999886543

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.97  E-value=2.5e-30  Score=243.11  Aligned_cols=329  Identities=14%  Similarity=0.039  Sum_probs=222.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ......++.|...    +++++.+.+++.+.+.   ...|++..+..++++.++++++      .  +..++++||++++
T Consensus        12 ~~~~~~~~~~~~~----~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~~g~~a~   76 (359)
T 3pj0_A           12 KTPYKLGGNGPRN----VGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG------K--QSAVFFPSGTMAQ   76 (359)
T ss_dssp             TCSEESSSSSCCB----HHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHH
T ss_pred             hcchhhcCCCccc----cCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC------C--CcEEEeCCHHHHH
Confidence            4555556655421    3457888888877432   2467777778899999999984      2  2335558888999


Q ss_pred             HHHHHHhcCCCCe--EEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc-c
Q 014631          123 QVILTVLARPGAN--ILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC-G  196 (421)
Q Consensus       123 ~~~~~~l~~~gd~--Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt-G  196 (421)
                      ..+++++.++||+  |+++.+.|....   ......|.+++.++.   +++.+|++++++. .++++++++++|+||+ |
T Consensus        77 ~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G  152 (359)
T 3pj0_A           77 QIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGG  152 (359)
T ss_dssp             HHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTS
T ss_pred             HHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCc
Confidence            9999999888886  555555544322   222456888888765   3457899999988 7789999999999988 7


Q ss_pred             cccCHHHHHHHHHHHHhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcc
Q 014631          197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI  274 (421)
Q Consensus       197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  274 (421)
                      .+++.+++++|+++|++||+++|+|++|..+..  .+.....+.   .... +++.|+||++++++ + |+++.+     
T Consensus       153 ~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~-g-g~~~~~-----  221 (359)
T 3pj0_A          153 QLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIA-G-AILAGN-----  221 (359)
T ss_dssp             BCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSS-C-EEEEEC-----
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcc-e-EEEECC-----
Confidence            999999999999999999999999999875431  122222221   1112 44568999876653 2 677664     


Q ss_pred             hhHHHHHHHHhhhccc-c--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631          275 LQELRIVDSIKGYLNI-S--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM  351 (421)
Q Consensus       275 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~  351 (421)
                         +++++.+...... .  .........++..+++.    .. +..++++++++++.+.|+++|++.+...|..++++|
T Consensus       222 ---~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~  293 (359)
T 3pj0_A          222 ---DDFVQEAKIWKRRYGGDLISLYPYILSADYYFEK----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFH  293 (359)
T ss_dssp             ---HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEE
T ss_pred             ---HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEE
Confidence               4577777654321 1  11122222333334432    12 334456788889999999988988423567778888


Q ss_pred             EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-----CCHHHHHHHHHHHHHH
Q 014631          352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-----IEPSALEEGLGRIKAF  413 (421)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-----~~~e~l~~~~~~l~~~  413 (421)
                      +.++....    .+.+.+.+.+.++||.+.||..|+.  ..++|++++     .+.+++++++++|.+.
T Consensus       294 ~~~~~~~~----~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          294 VYFENSAD----EIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             EEESSCHH----HHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             EEecCccc----hhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence            88764210    1233444556778999999987654  357999886     4789999999998875

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.97  E-value=2.3e-30  Score=243.19  Aligned_cols=299  Identities=13%  Similarity=0.077  Sum_probs=205.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC--eEEEcCCCCcchHH---HHhhcC
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEA---NARHTR  154 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd--~Vl~~~p~y~~~~~---~~~~~g  154 (421)
                      ..|++..+..+|+++++++++      .  +..++++||++++..+++++.++||  .|+++.+.|.....   .+...|
T Consensus        41 ~~y~~~~~~~~l~~~la~~~~------~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g  112 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVLG------M--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP  112 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred             ccccCChHHHHHHHHHHHHhC------C--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence            467776778999999999984      2  2345557788899999999888888  66666666554332   345568


Q ss_pred             ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc-ccccCHHHHHHHHHHHHhcCcEEEEccccccc--ccCC
Q 014631          155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDHL--TFGS  231 (421)
Q Consensus       155 ~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~~~  231 (421)
                      .+++.++.   +++.+|++++++..  +++++++++|+||| |.+++.+++++|+++|++||+++|+|++|...  .+.+
T Consensus       113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~  187 (357)
T 3lws_A          113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE  187 (357)
T ss_dssp             CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred             cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence            88877763   33468999999873  38899999999998 99999999999999999999999999998721  1112


Q ss_pred             CCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc---cCCchHHHHHHHHHhhc
Q 014631          232 TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS---SGPATFVQGAVPQIFKN  308 (421)
Q Consensus       232 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~  308 (421)
                      .....+.  ...+  +++.|+||+|+.++.  ||++++        +++++.+.......   .......+.++..+++.
T Consensus       188 ~~~~~~~--~~~d--~~~~s~sK~~~~~~g--g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  253 (357)
T 3lws_A          188 KTAAEIA--GLFD--SIYISFYKGLGGIAG--AILAGP--------AAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL  253 (357)
T ss_dssp             CCHHHHH--TTSS--EEEEESSSTTCCSSC--EEEEEC--------HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH
T ss_pred             CChHHHH--hcCC--EEEEeccccCCCCce--EEEEcC--------HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence            2222221  1112  447899999844332  888874        35666665443211   11122333333344432


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631          309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM  388 (421)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  388 (421)
                          +.+. .+++.++++++.+.|+++|++.+...|..++|+|+.++....   .+..++ .+.+.++||.+.||..+..
T Consensus       254 ----~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~l~~~Gi~v~~g~~~~~  324 (357)
T 3lws_A          254 ----RKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---DISPKL-EQVQEETGLGFVGYLVDKD  324 (357)
T ss_dssp             ----HTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---HHHHHH-HHHHHHHCEESCSCCEECS
T ss_pred             ----HHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---HHHHHH-HHHHHhcCeEEecccccCC
Confidence                2222 334577888999999999898842357778899998864210   012344 4456778999999976653


Q ss_pred             -CCeEEEEec-----CCHHHHHHHHHHHHHHH
Q 014631          389 -KNWLRITFA-----IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       389 -~~~iRi~~~-----~~~e~l~~~~~~l~~~~  414 (421)
                       ..++|++++     .+.+++++++++|.+++
T Consensus       325 ~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          325 GYCSTEISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             SEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             CceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence             238999986     47899999999998765

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.97  E-value=1.9e-29  Score=244.51  Aligned_cols=333  Identities=14%  Similarity=0.095  Sum_probs=216.4

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +..++||+.|.+....++ .++.+.+++.+++....  .|+   +..++++.+++++.+.++   .+++|++++|+++|+
T Consensus        56 g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~  126 (453)
T 2cy8_A           56 GNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETT  126 (453)
T ss_dssp             CCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHH
T ss_pred             CCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHH
Confidence            667899988875533333 78999999999987632  232   356899999999988764   578999999999999


Q ss_pred             HHHHHH---hcCCCCeEEEcCCCCcchHHHHhh-----------cCce------eEeeeccCCCCccCCHHHHHhhhcc-
Q 014631          123 QVILTV---LARPGANILLPKPGFPLYEANARH-----------TRLE------IRHFDLLPEKGWEVDLDGLEALADE-  181 (421)
Q Consensus       123 ~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~e~l~~~~~~-  181 (421)
                      ..+++.   +.++ +.|++.+|+|+++...+..           .|..      +..++.       .|++++++.+++ 
T Consensus       127 ~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~  198 (453)
T 2cy8_A          127 LLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANH  198 (453)
T ss_dssp             HHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhc
Confidence            999987   6554 6888999999976543322           1221      122221       388999988863 


Q ss_pred             --CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC
Q 014631          182 --NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI  257 (421)
Q Consensus       182 --~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  257 (421)
                        +++ +++++| +|+||.++ +.+++++|.++|++||+++|+||+|+++ +.|.. ..+..++...+   +.|+||.++
T Consensus       199 ~~~~~-~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~  272 (453)
T 2cy8_A          199 GSDIA-AFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-GMQALLDVQPD---LTCLAKASA  272 (453)
T ss_dssp             GGGEE-EEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-HHHHHHTCCCS---EEEEEGGGG
T ss_pred             CCCEE-EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-hhhHHhCCCCc---EEEEChhhh
Confidence              344 556776 47799765 6999999999999999999999999987 44432 12222222222   238999987


Q ss_pred             CCCceEEEEEeeCCCcchhHHHHHHHHhh---h---cccccCCchHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHH
Q 014631          258 VPGWRLGWLVTSDPSGILQELRIVDSIKG---Y---LNISSGPATFVQGAVPQIFKN-TKEDFFSKIVDILRDTADICYD  330 (421)
Q Consensus       258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~  330 (421)
                      . |+|+||++++        +++++.+..   .   ...+.+++++++.++.++|+. . .   ++..++++++++++.+
T Consensus       273 ~-G~~~G~v~~~--------~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~  339 (453)
T 2cy8_A          273 G-GLPGGILGGR--------EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFARE  339 (453)
T ss_dssp             T-TSSCEEEEEC--------HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHH
T ss_pred             C-CcceEEEech--------HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHH
Confidence            4 8999999996        356666554   1   112346788888888888864 2 1   2344556666666666


Q ss_pred             HhhcCC---CccccCCCCceeEEEEecCc-----c----ccc-----CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEE
Q 014631          331 RIKEIP---CITCPRKPEGSMFVMVKLNL-----S----LLE-----GISDDMEFALQLAKEESVIVLPGMAVGMKNWLR  393 (421)
Q Consensus       331 ~l~~~~---g~~~~~~~~~~~~~~~~~~~-----~----~~~-----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iR  393 (421)
                      .|+++.   ++... .+..|.++|+.++.     .    ...     ......++...+ .++||.+.|+      +.+|
T Consensus       340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gv~v~~~------~~~~  411 (453)
T 2cy8_A          340 AMNHLFARKGLNWL-AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMAL-ILEGVDIGGR------GSVF  411 (453)
T ss_dssp             HHHHHHHHTTCCEE-EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHH-HHTTEECBTT------TEEE
T ss_pred             HHHHHHhhCCCcEE-EEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHH-HHCCeEEeCC------CCEE
Confidence            665430   22211 23446688888863     1    000     000134566655 4679999653      2477


Q ss_pred             EEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          394 ITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       394 i~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      +++..+++++++++++|+++++++.+
T Consensus       412 l~~~~t~~~i~~~l~~l~~~l~~~~~  437 (453)
T 2cy8_A          412 LSAQHEREHVEHLVTTFDRVLDRLAD  437 (453)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeccCCHHHHHHHHHHHHHHHHHHHh
Confidence            77668999999999999999987643

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.97  E-value=1.6e-28  Score=236.18  Aligned_cols=338  Identities=14%  Similarity=0.061  Sum_probs=212.4

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      +.++|..+.      .+.++.+.+++.+.+.+.....|+      .......+++...+++.+.+|  .+. ..++++||
T Consensus        33 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~-~~v~~~~G  103 (425)
T 3ecd_A           33 SQVELIASE------NIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN--AGH-ANVQPHSG  103 (425)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT--CSE-EECCCSSH
T ss_pred             cceeeeccc------CCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC--CCC-ceeecCch
Confidence            457775543      134899999999887532111221      111111223222233433333  222 23458889


Q ss_pred             HHHHHHHHHHhcCCCCeEEEcCCCCcc---hHHHHhhcCce--eEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCC
Q 014631          119 KQAIQVILTVLARPGANILLPKPGFPL---YEANARHTRLE--IRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPG  192 (421)
Q Consensus       119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~~--~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~  192 (421)
                      ++++..++.+++++||+|+++.|+|++   +.......|..  ++.++.++ +++.+|++++++.+. ++++++++++|+
T Consensus       104 s~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~  182 (425)
T 3ecd_A          104 AQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGFSA  182 (425)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEECSC
T ss_pred             HHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEcccc
Confidence            999999999999999999999999987   22222244554  44454432 346799999999886 578999999999


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      ||+.     .++++|.++|++||+++|+||+|.. +.+.+.....+...     .++++|+||++  +|.|+||+++++ 
T Consensus       183 ~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~-----di~~~s~sK~l--~g~~~g~~~~~~-  249 (425)
T 3ecd_A          183 YPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHA-----HVVTSTTHKTL--RGPRGGFVLTND-  249 (425)
T ss_dssp             CCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC-----SEEEEESSGGG--CCCSCEEEEESC-
T ss_pred             CCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcC-----cEEEecCCccc--CCCCcEEEEeCC-
Confidence            9643     4478999999999999999999644 33444332222221     17789999996  677899999864 


Q ss_pred             CcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631          272 SGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF  349 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~  349 (421)
                            +++.+.+......  .++++.....++..++......++++..++++++++++.+.|.+. |+.+...+.++++
T Consensus       250 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~  322 (425)
T 3ecd_A          250 ------EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHL  322 (425)
T ss_dssp             ------HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred             ------HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceE
Confidence                  2455555544322  224445455555444433234667888889999999999999885 7774322346778


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC------CCCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG------MKNWLRITFA------IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~------~~~~iRi~~~------~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +|+.++...     .+.+.+..+++++||.+.++..++      ..+.+|++++      .++++++++++.|++++++.
T Consensus       323 ~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~  397 (425)
T 3ecd_A          323 LLVDLRPKG-----LKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL  397 (425)
T ss_dssp             EEEECGGGT-----CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCC-----CCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence            888876421     133445556688899999443221      2468999965      24899999999999998765

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.97  E-value=4.4e-29  Score=242.92  Aligned_cols=334  Identities=17%  Similarity=0.153  Sum_probs=236.9

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP---SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..++.|+ +.+.     +..+.+.+++.+...  ..+.|.+   .+|..++++.+++++.+.+|..  . .+++++||++
T Consensus        66 ~~~~~lg-~~~~-----~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~-~~~~~~ggt~  134 (474)
T 1wyu_B           66 TTFYPLG-SCTM-----KYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMD--A-ITLEPAAGAH  134 (474)
T ss_dssp             TSCCCBT-TTCC-----CCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS--E-EECCCSSHHH
T ss_pred             cCccccc-cccc-----cCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCC--c-eeecChHHHH
Confidence            3567787 5322     233556666665421  1234443   4566788888888888877643  2 4678899999


Q ss_pred             HHHHHHHHh----cCCCC-----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631          121 AIQVILTVL----ARPGA-----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       121 al~~~~~~l----~~~gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      ++..++.++    .++||     +|+++.++|.++...+...|++++.++.+.  ++.+|++++++.+++++++|++++|
T Consensus       135 a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~~t~~v~~~~p  212 (474)
T 1wyu_B          135 GELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGPHVAALMLTNP  212 (474)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCSTTEEEEEECSS
T ss_pred             HHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCCCceEEEEECC
Confidence            998755544    35787     999999999999999999999999998753  4679999999999888999999998


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC-C---ceEEEEE
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP-G---WRLGWLV  267 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G---~r~G~~~  267 (421)
                       ||||.+.  +++++|+++|++||+++|+|++|..+.++ .  .....++   ..+++.|+||+|+.+ |   .|+||++
T Consensus       213 -n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g-~--~~~~~~g---~di~~~s~~K~~~~p~g~gG~~~G~~~  283 (474)
T 1wyu_B          213 -NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMG-W--ARPGDMG---FDVVHLNLHKTFTVPHGGGGPGSGPVG  283 (474)
T ss_dssp             -CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTT-T--CCHHHHT---CSEEECCTTTTTCCCCTTSCCCCCCEE
T ss_pred             -CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhcc-C--CCcccCC---CcEEEEeCccccccCCCCCCCCeEEEE
Confidence             6899872  46999999999999999999999876532 1  1222222   237788999998766 4   6999999


Q ss_pred             eeCCCcchhHHHHHHHHhh-h-------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631          268 TSDPSGILQELRIVDSIKG-Y-------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI  327 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  327 (421)
                      +++        ++++.+.. .                   .....+.+...+.++..++.....+++++..+++.+++++
T Consensus       284 ~~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~  355 (474)
T 1wyu_B          284 VKA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARY  355 (474)
T ss_dssp             ECG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EcH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            964        23333321 0                   0011245667777777777643456788888999999999


Q ss_pred             HHHHhhcCCCccccCCCCceeE-EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--CCCeEEEEec--CCHHH
Q 014631          328 CYDRIKEIPCITCPRKPEGSMF-VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--MKNWLRITFA--IEPSA  402 (421)
Q Consensus       328 ~~~~l~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~iRi~~~--~~~e~  402 (421)
                      +.+.|+++ |+.+. .+...+. +|+.++.     ..+..++..+|+ ++||.+ ++..|.  ..+++|++++  +++++
T Consensus       356 l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~~L~-~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~  426 (474)
T 1wyu_B          356 LKELLKEK-GYRVP-YDGPSMHEFVAQPPE-----GFRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKET  426 (474)
T ss_dssp             HHHHHHHT-TCBCS-SCSSCCSCEEEBCST-----TCCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHH
T ss_pred             HHHHHhhc-CcEec-CCCCcceEEEEEcCC-----CCCHHHHHHHHH-HCCccc-cccccccccCCEEEEEeecCCCHHH
Confidence            99999987 87732 2322221 5555521     124667777765 559985 555553  3678999998  48999


Q ss_pred             HHHHHHHHHHHHHH
Q 014631          403 LEEGLGRIKAFCQR  416 (421)
Q Consensus       403 l~~~~~~l~~~~~~  416 (421)
                      +++++++|++++++
T Consensus       427 id~~~~~L~~~~~~  440 (474)
T 1wyu_B          427 LEAFAEAMGALLKK  440 (474)
T ss_dssp             HHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988753

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.97  E-value=2.5e-28  Score=230.82  Aligned_cols=314  Identities=11%  Similarity=0.093  Sum_probs=224.5

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh---cCCCCeEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL---ARPGANIL  137 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~Vl  137 (421)
                      +.++.+.+++.+.+...   .|.+.....++++.++++++      .  +++++|+|+++++..++.++   .++||+|+
T Consensus        10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl   78 (375)
T 2fnu_A           10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFSADRNEII   78 (375)
T ss_dssp             CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred             CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence            56789999999998753   23344557899999999984      2  28999999999999999999   88999999


Q ss_pred             EcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcE
Q 014631          138 LPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIM  217 (421)
Q Consensus       138 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~  217 (421)
                      ++.|+|+++...+...|++++.++++++.  .+|++++++.++++++++++++|   ||.+.+   +++|.++|++||++
T Consensus        79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~  150 (375)
T 2fnu_A           79 TTPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLS  150 (375)
T ss_dssp             ECSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred             ECCCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence            99999999999999999999999876432  68999999999888888887776   999865   78899999999999


Q ss_pred             EEEcccccccccCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc----
Q 014631          218 VISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS----  291 (421)
Q Consensus       218 li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~----  291 (421)
                      +|+|++|+.+.....  ..+..+.    .+++.|+|  |+++. |  +|++++.++      +++.+.+.......    
T Consensus       151 li~D~a~~~~~~~~~--~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~~~~~~~~~  215 (375)
T 2fnu_A          151 FLSDSSHALGSEYQN--KKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLFRSHGMLKK  215 (375)
T ss_dssp             EEEECTTCTTCEETT--EETTSSS----SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHHTBTTEEES
T ss_pred             EEEECccccCCeECC--eeccccC----CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHHHhcCCccc
Confidence            999999987542111  1121111    26677888  99755 6  788887421      24555554432110    


Q ss_pred             -------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-----CceeEEEEe
Q 014631          292 -------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-----EGSMFVMVK  353 (421)
Q Consensus       292 -------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-----~~~~~~~~~  353 (421)
                                   ...+.+...+....     ..++++..++.+++++++.+.|+++|++.+. .+     ..++++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~a~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~  289 (375)
T 2fnu_A          216 DFFEGEVKSIGHNFRLNEIQSALGLSQ-----LKKAPFLMQKREEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLYPIL  289 (375)
T ss_dssp             SSSCEEESSCCCBCCCCHHHHHHHHHH-----HTTHHHHHHHHHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCEEEE
T ss_pred             cccccccccccccCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEEEEE
Confidence                         12222222222111     2456778888999999999999998888733 33     123455777


Q ss_pred             cCcccccCCCChHHHHHHHHhhcCeeEEeCCC-------CC-------C-------CCeEEEEec--CCHHHHHHHHHHH
Q 014631          354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMA-------VG-------M-------KNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------~~-------~-------~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      ++....   .+..++...| .++||.+..+..       |+       .       .+++|++++  +++++++++++.|
T Consensus       290 ~~~~~~---~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l  365 (375)
T 2fnu_A          290 MHQKFF---TCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSV  365 (375)
T ss_dssp             ECGGGG---GGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred             eCcccc---chHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHH
Confidence            763210   0245566655 677999983211       11       1       157999998  6899999999999


Q ss_pred             HHHHHHhh
Q 014631          411 KAFCQRHA  418 (421)
Q Consensus       411 ~~~~~~~~  418 (421)
                      ++++++++
T Consensus       366 ~~~~~~~~  373 (375)
T 2fnu_A          366 LKTFESFK  373 (375)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhc
Confidence            99987653

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.97  E-value=2.7e-29  Score=242.20  Aligned_cols=337  Identities=14%  Similarity=0.092  Sum_probs=221.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||..|.+....++ .++.+.+++.+++.+.....| +.....++++.+++++    +   .+++|++++|+++|
T Consensus        54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~---~~~~v~~~~sgseA  124 (434)
T 2epj_A           54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGA-PGEAEVLLAEKILGYV----K---RGGMIRFVNSGTEA  124 (434)
T ss_dssp             TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHH----C---TTCEEEEESSHHHH
T ss_pred             CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhC----C---CCCEEEEeCCHHHH
Confidence            4678899988875433333 789999999999987432233 2212234555555544    2   46899999999999


Q ss_pred             HHHHHHH---hcCCCCeEEEcCCCCcchHHHHh-h-------------cCc------eeEeeeccCCCCccCCHHHHHhh
Q 014631          122 IQVILTV---LARPGANILLPKPGFPLYEANAR-H-------------TRL------EIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus       122 l~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +..+++.   +. +++.|++.+|+|+++...+. .             .|.      .+..++.       .|++++++.
T Consensus       125 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  196 (434)
T 2epj_A          125 TMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV  196 (434)
T ss_dssp             HHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence            9999987   44 45788898999988654332 1             122      1333332       278999988


Q ss_pred             hcc--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          179 ADE--NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       179 ~~~--~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                      +++  +..++++++| +|+||.++ +++.+++|.++|++||+++|+||+|+++ +.|.. .....++...+   +.||||
T Consensus       197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK  271 (434)
T 2epj_A          197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGD---IIVLGK  271 (434)
T ss_dssp             HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCS---EEEEEG
T ss_pred             HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCC---eeeecc
Confidence            863  2334556667 56799876 6899999999999999999999999977 33432 12222222222   348999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD  330 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  330 (421)
                      .++. |+|+||++++        +++++.+....    ..+.+.+++++.++.++|+...+   ++..++++++++++.+
T Consensus       272 ~l~~-G~~~G~v~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~  339 (434)
T 2epj_A          272 IIGG-GFPVGAVAGS--------REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEE  339 (434)
T ss_dssp             GGGT-TSSCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHH
T ss_pred             hhcC-Ccceeeeeec--------HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence            9876 8999999986        35666665421    12346788888888888764221   2345666667777777


Q ss_pred             HhhcCC---CccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCC
Q 014631          331 RIKEIP---CITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE  399 (421)
Q Consensus       331 ~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~  399 (421)
                      .|+++.   ++... .+..|.++|+.++.....        ......++...+ .++||.+.||..    ..+|+++..+
T Consensus       340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~----~~~~~~~~~t  413 (434)
T 2epj_A          340 AASEVLDRTGLPYT-INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEM-LRRGVFIAPSNL----EAVFTGLPHQ  413 (434)
T ss_dssp             HHHHHHHHHTCCEE-EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCS
T ss_pred             HHHHHHhhCCCcEE-EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHH-HHCCeEEeccCC----CcEEEeccCC
Confidence            766531   33211 233466888888641000        000134566555 567999998752    3467776689


Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q 014631          400 PSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++++++++++|+++++++.
T Consensus       414 ~e~i~~~l~~l~~~l~~~~  432 (434)
T 2epj_A          414 GEALEIAVEGLRSSLKTVL  432 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999988763

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.97  E-value=5.5e-29  Score=239.57  Aligned_cols=345  Identities=13%  Similarity=0.069  Sum_probs=218.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|.+++||..|.+....+ ..+|.+.+++.+++++...  |..   ..+++..+++++.+.++   ++++|++++|++++
T Consensus        50 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea  120 (427)
T 3fq8_A           50 DGNRYIDYVGTWGPAICG-HAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTEA  120 (427)
T ss_dssp             TSCEEEESSGGGTTCTTC-BTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhhccC-CCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            478899999887553322 3689999999999877432  322   24566666666666554   57899999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-CceeEeeeccCCCCcc------------CCHHHHHhhhcc---Cc
Q 014631          122 IQVILTVLA--RPGANILLPKPGFPLYEANARHT-RLEIRHFDLLPEKGWE------------VDLDGLEALADE---NT  183 (421)
Q Consensus       122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~e~l~~~~~~---~~  183 (421)
                      +..+++...  ..+++|++.+++|+++...+... +.....++.....++.            -|++++++.+.+   ++
T Consensus       121 ~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  200 (427)
T 3fq8_A          121 CMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEI  200 (427)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTE
T ss_pred             HHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence            999995432  23478999999998865444332 2111111111111100            188999998865   44


Q ss_pred             eEEEEeCCCCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          184 VAMVIVNPGNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       184 ~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      +++++..++|++|.+.+ .+.+++|.++|++||+++|+||+|+++ +.|... ....++...+   +.||||.|+ +|+|
T Consensus       201 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~  274 (427)
T 3fq8_A          201 AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVTPD---LTTLGKIIG-GGLP  274 (427)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCCCS---EEEECGGGG-TTSS
T ss_pred             EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCCCC---hhhhhhhhh-CCcc
Confidence            44444444677787655 566999999999999999999999987 555422 2222222212   358899987 7999


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      +||++++        +++++.+....    ..+.+.+++++.++.++++... +...++.++..+..++.+.+.+.+. +
T Consensus       275 ~G~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~  345 (427)
T 3fq8_A          275 VGAYGGK--------REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQET-G  345 (427)
T ss_dssp             CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             eEEEEEc--------HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence            9999885        45777665421    2234668899999888886422 2333333333333333344333333 2


Q ss_pred             ccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631          338 ITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR  409 (421)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~  409 (421)
                      +. ...+..|+++|+.+......        ......++...+ .++||.+.|+..    ..+|+++..+++++++++++
T Consensus       346 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~  419 (427)
T 3fq8_A          346 HA-ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAA  419 (427)
T ss_dssp             CC-CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHHHHHHHHHH
T ss_pred             CC-eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHH-HHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHH
Confidence            22 11234467888887542110        000023455554 567999998753    24555555899999999999


Q ss_pred             HHHHHHH
Q 014631          410 IKAFCQR  416 (421)
Q Consensus       410 l~~~~~~  416 (421)
                      |++++++
T Consensus       420 l~~~l~~  426 (427)
T 3fq8_A          420 ARTVMSA  426 (427)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999875

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.97  E-value=2.9e-28  Score=236.02  Aligned_cols=337  Identities=14%  Similarity=-0.002  Sum_probs=235.0

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC---CcEEEcCCHHHHHHHHHHHhcC------
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP---DDVYLTAGCKQAIQVILTVLAR------  131 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~---~~i~~~~g~~~al~~~~~~l~~------  131 (421)
                      +.++.+.+++.+.+... ..+|...++..++++.+++++.+.+|.+.+.   ..+++|+|+++++..++.++.+      
T Consensus        53 ~~~~~v~e~~~~a~~~~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~  131 (452)
T 2dgk_A           53 WDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM  131 (452)
T ss_dssp             CCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHhccC-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence            45578889988887653 2345555667789999999998888854322   2489999999999999887753      


Q ss_pred             --CC-----CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHH
Q 014631          132 --PG-----ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL  204 (421)
Q Consensus       132 --~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l  204 (421)
                        +|     ++|++++ .|.++...+...|++++.+++++ +++.+|+++|++.+++++++|++++|+||||.+   .++
T Consensus       132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l  206 (452)
T 2dgk_A          132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY---EFP  206 (452)
T ss_dssp             HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBB---CCH
T ss_pred             HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCccc---CCH
Confidence              55     5899999 99999999999999999998764 357899999999998889999999999999999   558


Q ss_pred             HHHHHHHHhc------CcEEEEccccccccc---CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631          205 QKIAEKARKL------GIMVISDEVYDHLTF---GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL  275 (421)
Q Consensus       205 ~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  275 (421)
                      ++|.++|+++      |+++++|++|+.+..   .+.....+   ...+-.++..|++|+ +..|.++||++++++... 
T Consensus       207 ~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~~~~-  281 (452)
T 2dgk_A          207 QPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF---RLPRVKSISASGHKF-GLAPLGCGWVIWRDEEAL-  281 (452)
T ss_dssp             HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---TSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGS-
T ss_pred             HHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc---CCCCCcEEEECcccc-cCCCCCeEEEEEcCHHHH-
Confidence            8888999995      999999999998642   22111111   111123456788996 778899999999653211 


Q ss_pred             hHHHHHHHHhhhcc----------cccCC---chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          276 QELRIVDSIKGYLN----------ISSGP---ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       276 ~~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                           .+.+.....          ..++.   ..+.+.++...+   ...+++++.++..++++++.+.|++++++.++ 
T Consensus       282 -----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-  352 (452)
T 2dgk_A          282 -----PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL---GREGYTKVQNASYQVAAYLADEIAKLGPYEFI-  352 (452)
T ss_dssp             -----CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-
T ss_pred             -----HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-
Confidence                 121111000          01111   223333333333   34668888999999999999999998888743 


Q ss_pred             CC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC---CCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          343 KP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV---GMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       343 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      .|    ....++.+.++.... ...+..++...| .++|+.+......   ....++|++++  +++++++++++.|+++
T Consensus       353 ~~~~~~~~~~~v~f~~~~~~~-~~~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~  430 (452)
T 2dgk_A          353 CTGRPDEGIPAVCFKLKDGED-PGYTLYDLSERL-RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS  430 (452)
T ss_dssp             EECCTTTBSSEEEEEECTTCC-CSCCHHHHHHHH-HHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCeEEEEEEecCccc-ccCCHHHHHHHH-HhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            33    233455566653100 001235666665 5679965432211   12458999998  6799999999999999


Q ss_pred             HHHhhh
Q 014631          414 CQRHAK  419 (421)
Q Consensus       414 ~~~~~~  419 (421)
                      ++++++
T Consensus       431 ~~~~~~  436 (452)
T 2dgk_A          431 LKYLSD  436 (452)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            877653

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.97  E-value=6.5e-29  Score=238.81  Aligned_cols=333  Identities=13%  Similarity=0.084  Sum_probs=222.3

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||..|.+....++ .++.+.+++.+++++..  .|+   +..++++.+++++.++++   .+++|++++|+++|
T Consensus        50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea  120 (424)
T 2e7u_A           50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGL--TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTEA  120 (424)
T ss_dssp             TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCS--CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred             CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            3678899988865433333 78999999999998742  232   224566666666666553   47899999999999


Q ss_pred             HHHHHHH---hcCCCCeEEEcCCCCcchHHHHhh--------------cCc------eeEeeeccCCCCccCCHHHHHhh
Q 014631          122 IQVILTV---LARPGANILLPKPGFPLYEANARH--------------TRL------EIRHFDLLPEKGWEVDLDGLEAL  178 (421)
Q Consensus       122 l~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~e~l~~~  178 (421)
                      +..+++.   +.+ ++.|++.+|+|+++...+..              .|.      ++..++.       .|++++++.
T Consensus       121 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  192 (424)
T 2e7u_A          121 TMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV  192 (424)
T ss_dssp             HHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence            9999986   444 57899999999986543321              121      1222221       278999888


Q ss_pred             hcc--CceEEEEeCCCCC-ccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631          179 ADE--NTVAMVIVNPGNP-CGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK  254 (421)
Q Consensus       179 ~~~--~~~~i~~~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  254 (421)
                      +++  +..++++++|+|+ ||.++ +++.+++|.++ ++||+++|+||+|+++ +.|.. .....++...++   .||||
T Consensus       193 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK  266 (424)
T 2e7u_A          193 LKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLGK  266 (424)
T ss_dssp             HHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEECG
T ss_pred             HHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhhh
Confidence            763  3345667788654 89765 78999999999 9999999999999987 44432 122222222222   38999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD  330 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  330 (421)
                      +++ +|+|+||++++        +++++.+....    ..+.+.+++++.++.++++...+  .++..++++++++++.+
T Consensus       267 ~l~-~G~~~G~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~  335 (424)
T 2e7u_A          267 ILG-GGLPAAAYAGR--------REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEA  335 (424)
T ss_dssp             GGG-TTSSCEEEEEC--------HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHH
T ss_pred             hhh-CCcceEEEEEc--------HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Confidence            987 59999999996        35666665521    12346788888888888864221  14456667777777777


Q ss_pred             HhhcC---CCccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCC
Q 014631          331 RIKEI---PCITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE  399 (421)
Q Consensus       331 ~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~  399 (421)
                      .|+++   .++... .+..|.++|+.++.....        ......++...+ .++||.+.|+..    ..+|+++..+
T Consensus       336 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~----~~~~~~~~~t  409 (424)
T 2e7u_A          336 GLKEVLKEKGLPHT-VNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGL-LDRGIYWPPSNF----EAAFLSVAHR  409 (424)
T ss_dssp             HHHHHHHHTTCCCE-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HTTTEECCSSSS----SCEECCTTCC
T ss_pred             HHHHHHHhCCCceE-EEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHH-HHCCeEEeccCC----CceEeeccCC
Confidence            77653   133211 233466888888641000        000133566655 468999998752    3477776689


Q ss_pred             HHHHHHHHHHHHHHH
Q 014631          400 PSALEEGLGRIKAFC  414 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~  414 (421)
                      ++++++++++|++++
T Consensus       410 ~~~i~~~l~~l~~~l  424 (424)
T 2e7u_A          410 EEDVEKTLEALRKAL  424 (424)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999998763

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.97  E-value=1.8e-29  Score=244.13  Aligned_cols=334  Identities=14%  Similarity=0.141  Sum_probs=220.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHH-H-HHHH---HHhcCCCCCCC---CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAA-D-AVVD---AVRSAEFDCYS---PSVGILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~-~-a~~~---~~~~~~~~~y~---~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      |..++||..|.+....+ +.+|.+. + ++.+   ++....  .|+   +.....++++.+++++    + ...+++|++
T Consensus        53 g~~ylD~~~~~~~~~lG-~~~p~v~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~la~~la~~~----~-~~~~~~v~~  124 (449)
T 2cjg_A           53 GRRYLDMFTFVASSALG-MNPPALVDDREFHAELMQAALNK--PSNSDVYSVAMARFVETFARVL----G-DPALPHLFF  124 (449)
T ss_dssp             CCEEEESSHHHHTCSSC-BSCHHHHTCHHHHHHHHHHHTCC--CCTTTCCCHHHHHHHHHHHHHH----C-CTTCCEEEE
T ss_pred             CcEEEEccCCccccCCC-CCCHHHHHHHHHHHHHHHHHhcC--CCCcccCCHHHHHHHHHHHHhc----C-CCCCCEEEE
Confidence            56788887776543322 2589999 8 9999   776632  222   1111245555555554    3 245789999


Q ss_pred             cCCHHHHHHHHHHHhc---C----------C-CCeEEEcCCCCcchHHHHhhcC---------c-----eeEeeeccCCC
Q 014631          115 TAGCKQAIQVILTVLA---R----------P-GANILLPKPGFPLYEANARHTR---------L-----EIRHFDLLPEK  166 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~---~----------~-gd~Vl~~~p~y~~~~~~~~~~g---------~-----~~~~~~~~~~~  166 (421)
                      ++|+++|++.+++.+.   +          + ||+|++.+|+|+++...+...+         .     ++..++.+...
T Consensus       125 ~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  204 (449)
T 2cjg_A          125 VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPG  204 (449)
T ss_dssp             ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTT
T ss_pred             eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCch
Confidence            9999999999987543   2          2 8999999999998755432222         1     34444443200


Q ss_pred             Cc--------cCCHHHHHhhhc---cCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC
Q 014631          167 GW--------EVDLDGLEALAD---ENTVAMVIVNP-GNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP  233 (421)
Q Consensus       167 ~~--------~~d~e~l~~~~~---~~~~~i~~~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  233 (421)
                      ..        ..+++++++.++   +++++ ++++| +||+| ..++.+++++|.++|++||+++|+||+|+++.+.|..
T Consensus       205 ~~~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~  283 (449)
T 2cjg_A          205 LDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTA  283 (449)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred             hhccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcc
Confidence            11        245666888774   45555 45666 68999 5889999999999999999999999999988776652


Q ss_pred             cccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHH-----hhh-cccccCCchHHHHHHHHHhh
Q 014631          234 YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI-----KGY-LNISSGPATFVQGAVPQIFK  307 (421)
Q Consensus       234 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~l~  307 (421)
                      . .+..++...+++   ||||.+     |+||+++++        ++++.+     ... ...+.+.+++++.++.++|+
T Consensus       284 ~-~~~~~~~~~di~---t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~  346 (449)
T 2cjg_A          284 W-AYQQLDVAPDIV---AFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILE  346 (449)
T ss_dssp             S-THHHHTCCCSEE---EECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred             e-eecccCCCceEE---EecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHH
Confidence            2 222222222233   789996     689999863        244431     111 12345778899999888886


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhc----CCC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          308 NTKEDFFSKIVDILRDTADICYDRIKE----IPC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      ...+   ++..++++++++++.+.|++    +|. +..+ .+. |.|+++.++...     ...+++..++ ++||.+.|
T Consensus       347 ~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~-g~~~~~~~~~~~-----~~~~~~~~l~-~~Gv~v~~  415 (449)
T 2cjg_A          347 VIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDP-RGR-GLMCAFSLPTTA-----DRDELIRQLW-QRAVIVLP  415 (449)
T ss_dssp             HHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEE-TTEEEEECSSHH-----HHHHHHHHHH-HTTEECEE
T ss_pred             HHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eec-cEEEEEEECChH-----HHHHHHHHHH-HCCeEEec
Confidence            4222   23456667777777777764    344 4312 333 556677776321     2456776665 67999999


Q ss_pred             CCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          383 GMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       383 g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +.    .+++|++++  ++++++++++++|+++++++
T Consensus       416 ~g----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          416 AG----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             ET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            73    479999776  79999999999999998764

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.97  E-value=1.4e-28  Score=237.76  Aligned_cols=337  Identities=15%  Similarity=0.078  Sum_probs=223.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CCCHHHH--HHHH-HHHhhhCCCCCCCCcEEE-cCC
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS---VGILPAR--RAIA-DYLNSELPCKLSPDDVYL-TAG  117 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~l~--~~ia-~~l~~~~~~~~~~~~i~~-~~g  117 (421)
                      +.|+|..+. +     +.++.+.+++.+.+.+.....|+..   .|...++  +.++ +++.+.+|  .+  .+.+ ++|
T Consensus        46 ~~i~l~~~~-~-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g--~~--~~~v~~~s  115 (447)
T 3h7f_A           46 DTLEMIASE-N-----FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG--AE--FANVQPHS  115 (447)
T ss_dssp             HSEECCTTC-C-----CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CS--EEECCCSS
T ss_pred             CceeEecCC-C-----CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcC--CC--ceEEEeCC
Confidence            567774432 2     3589999999888754322233322   2444443  4444 55555444  22  2444 788


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCCcchH-HH--Hhh--cCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCC
Q 014631          118 CKQAIQVILTVLARPGANILLPKPGFPLYE-AN--ARH--TRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNP  191 (421)
Q Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~--~~~--~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p  191 (421)
                      |++++..++.+++++||+|++++|+|.++. ..  ...  .+..++.+++++ +++.+|++++++.+. .+++++++++|
T Consensus       116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~  194 (447)
T 3h7f_A          116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS  194 (447)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred             HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence            899999999999999999999999997732 11  112  233455555543 345789999999885 46788888899


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      +||++.     ++++|.++|++||+++|+|++|.. +.+.|.....+.   .  ..+++.|+||++  +|+|.||+++++
T Consensus       195 ~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~---~--~di~~~s~sK~l--~G~~gG~i~~~~  262 (447)
T 3h7f_A          195 AYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP---H--ADVVSTTVHKTL--GGGRSGLIVGKQ  262 (447)
T ss_dssp             SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT---T--CSEEEEESSGGG--CCCSCEEEEECG
T ss_pred             CCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC---C--CcEEEecCCcCC--CCCCeEEEEECH
Confidence            999876     589999999999999999999743 334343222221   1  127789999996  478899999863


Q ss_pred             CCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC----CCccccCCC
Q 014631          271 PSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI----PCITCPRKP  344 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~~~~~  344 (421)
                              ++.+.+.....  ..++++...+.++..++......++++..+++.++++++.+.|.+.    +|+.++..+
T Consensus       263 --------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~  334 (447)
T 3h7f_A          263 --------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGG  334 (447)
T ss_dssp             --------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGS
T ss_pred             --------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCC
Confidence                    34555544322  2234444445555555544334567888889999999999999875    577644334


Q ss_pred             CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE----eC--CCCCCCCeEEEEec------CCHHHHHHHHHHHHH
Q 014631          345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL----PG--MAVGMKNWLRITFA------IEPSALEEGLGRIKA  412 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g--~~~~~~~~iRi~~~------~~~e~l~~~~~~l~~  412 (421)
                      ..++++|+.+....     .+.+.+..+++++||.+.    |+  ..+..++++|+++.      .++++++++++.|.+
T Consensus       335 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~  409 (447)
T 3h7f_A          335 TDVHLVLVDLRDSP-----LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT  409 (447)
T ss_dssp             CSSSEEEEECTTSS-----CCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence            56778888775321     134556667788899998    65  23334678999985      468999999999999


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      ++++.
T Consensus       410 ~l~~~  414 (447)
T 3h7f_A          410 ALATG  414 (447)
T ss_dssp             HHHSG
T ss_pred             HHhcc
Confidence            98654

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.97  E-value=1.1e-28  Score=235.74  Aligned_cols=332  Identities=13%  Similarity=0.072  Sum_probs=223.2

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHH----HHHHHHhhhCCCCCCCCcEE
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPARR----AIADYLNSELPCKLSPDDVY  113 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~----~ia~~l~~~~~~~~~~~~i~  113 (421)
                      ..+++++.+.       +.++.+.+++.+.+.+.....|+      ......++++    .+++++    |  .+++.++
T Consensus        24 ~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~----g--~~~~~i~   90 (405)
T 2vi8_A           24 AKIELIASEN-------FVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF----G--AEHANVQ   90 (405)
T ss_dssp             HSEECCTTCC-------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEECC
T ss_pred             cceeeccCcc-------cCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceEEE
Confidence            4567775543       33899999999887532111221      1112345554    566655    3  3343344


Q ss_pred             EcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH-H--HhhcCc--eeEeeeccCCCCccCCHHHHHhhhcc-CceEEE
Q 014631          114 LTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA-N--ARHTRL--EIRHFDLLPEKGWEVDLDGLEALADE-NTVAMV  187 (421)
Q Consensus       114 ~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~-~--~~~~g~--~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~  187 (421)
                      +++| ++++..++.++.++||+|+++.|+|.++.. .  +...|.  +++.+++++ .++.+|++++++.+.+ ++++++
T Consensus        91 ~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~  168 (405)
T 2vi8_A           91 PHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIV  168 (405)
T ss_dssp             CSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEE
T ss_pred             ecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEE
Confidence            4555 999999999999999999999999987743 1  123343  666666542 3567899999998875 777776


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWL  266 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~  266 (421)
                      + +|+|. |..   .++++|.++|++||+++|+||+|+.+..... ... ..+..  ..++++|+||+|+ +.|   ||+
T Consensus       169 ~-~~~~~-~~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-~~~-~~~~~--~di~~~s~sK~~~g~~g---G~~  236 (405)
T 2vi8_A          169 A-AAAAY-PRI---IDFAKFREIADEVGAYLMVDMAHIAGLVAAG-LHP-NPVPY--AHFVTTTTHKTLRGPRG---GMI  236 (405)
T ss_dssp             E-CCSSC-CSC---CCHHHHHHHHHHHTCEEEEECTTTHHHHHTT-SSC-CSTTT--CSEEEEESSSTTCCCSC---EEE
T ss_pred             E-eCCCC-Ccc---CCHHHHHHHHHHcCCEEEEEccccccccccC-cCC-Ccccc--CCEEEEeccccCCCCCC---eEE
Confidence            5 55553 444   3489999999999999999999995332111 111 11111  1278899999986 455   999


Q ss_pred             EeeCCCcchhHHHHHHHHhhhcc-c-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          267 VTSDPSGILQELRIVDSIKGYLN-I-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      +++        +++.+.+..... . .+++++....++.++++.....++++..++++++++++.+.|+++ |+.+. .|
T Consensus       237 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~  306 (405)
T 2vi8_A          237 LCQ--------EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV-SG  306 (405)
T ss_dssp             EEC--------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-GG
T ss_pred             EEc--------HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cC
Confidence            985        346666655432 2 234455555555566654334578888999999999999999988 87733 43


Q ss_pred             -CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC----CC--CCCeEEEEecC------CHHHHHHHHHHHH
Q 014631          345 -EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA----VG--MKNWLRITFAI------EPSALEEGLGRIK  411 (421)
Q Consensus       345 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~----~~--~~~~iRi~~~~------~~e~l~~~~~~l~  411 (421)
                       ..++++|+.++...    .+..++... +.++||.+.+|..    +.  ..+++|++++.      +++++++++++|+
T Consensus       307 ~~~~~~~~~~~~~~~----~~~~~~~~~-l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~  381 (405)
T 2vi8_A          307 GTDNHLLLVDLRPQQ----LTGKTAEKV-LDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIG  381 (405)
T ss_dssp             SCSSSEEEEECGGGT----CCHHHHHHH-HHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred             CCCceEEEEEccCCC----CCHHHHHHH-HHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHH
Confidence             45788999886421    134555554 4778999999863    22  25689999983      7999999999999


Q ss_pred             HHHHHh
Q 014631          412 AFCQRH  417 (421)
Q Consensus       412 ~~~~~~  417 (421)
                      +++++.
T Consensus       382 ~~~~~~  387 (405)
T 2vi8_A          382 LVLKNV  387 (405)
T ss_dssp             HHHTCT
T ss_pred             HHHhcc
Confidence            998664

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.97  E-value=7.1e-29  Score=238.87  Aligned_cols=345  Identities=13%  Similarity=0.042  Sum_probs=213.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|..++||..|...... ...+|.+.+++.+++++.....| +.....++++.+++++    +   .++++++++||+++
T Consensus        51 ~g~~ylD~~~~~~~~~l-G~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~---~~~~v~~~~sGsea  121 (429)
T 4e77_A           51 DGKAYIDYVGSWGPMIL-GHNHPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLV----P---TMDMVRMVNSGTEA  121 (429)
T ss_dssp             TCCEEEESSGGGTTCTT-CBTCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHS----T---TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCchhcccc-CCCCHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhC----C---CCCEEEEeCcHHHH
Confidence            47889999888654322 23689999999999987432233 3333345555555554    2   47899999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhh-cCceeE--eeeccCC------CC---c-cCCHHHHHhhhcc--Cce
Q 014631          122 IQVILTVLA--RPGANILLPKPGFPLYEANARH-TRLEIR--HFDLLPE------KG---W-EVDLDGLEALADE--NTV  184 (421)
Q Consensus       122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~--~~~~~~~------~~---~-~~d~e~l~~~~~~--~~~  184 (421)
                      ++.+++...  ..++.|++.+++|+++...+.. .+....  ..+....      ..   . .-|++++++.+.+  ...
T Consensus       122 ~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  201 (429)
T 4e77_A          122 TMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV  201 (429)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred             HHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence            999998543  2557899999999987542211 111000  0000000      00   0 0178999988863  334


Q ss_pred             EEEEeCCCCCcc-cc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          185 AMVIVNPGNPCG-NV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       185 ~i~~~~p~nptG-~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++++++|+|++| .+ .+.+.+++|.++|++||+++|+||+|+++ +.|... ....++...+   +.||||.++ +|+|
T Consensus       202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~-~~~~~~~~pd---i~t~sK~~~-~G~~  275 (429)
T 4e77_A          202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAG-AQDYYHVIPD---LTCLGKIIG-GGMP  275 (429)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTC-HHHHTTCCCS---EEEEEGGGG-TTSC
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcch-HHHhcCCCCC---eeeeccccc-CCCC
Confidence            566788866554 44 34566999999999999999999999987 555422 2222332222   248999987 7999


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      +||++++        +++++.+...    ...+.+.+++++.++.++|+... +...++.++.....++.+.+.+.++ +
T Consensus       276 ~G~~~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~  346 (429)
T 4e77_A          276 VGAFGGR--------REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEE-N  346 (429)
T ss_dssp             CEEEEEC--------HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             eEEEEEC--------HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence            9999985        4576666542    22344788899999888886422 2333333333334444444444444 3


Q ss_pred             ccccCCCCceeEEEEecCcccc---------cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHH
Q 014631          338 ITCPRKPEGSMFVMVKLNLSLL---------EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLG  408 (421)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~  408 (421)
                      +. ...+..|.++++.++....         +......+++..+ .++||.+.|+..    ..+|+++..++++++++++
T Consensus       347 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~  420 (429)
T 4e77_A          347 IP-LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLM-LEEGVYLAPSAF----EAGFMSLAHSNEDIQKTVN  420 (429)
T ss_dssp             CC-CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHHHHHHHHH
T ss_pred             Cc-eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHH-HHCCeEEeecCC----CCEEEeccCCHHHHHHHHH
Confidence            22 1133456788888864200         0000114566555 566999998753    3567766689999999999


Q ss_pred             HHHHHHHH
Q 014631          409 RIKAFCQR  416 (421)
Q Consensus       409 ~l~~~~~~  416 (421)
                      +|++++++
T Consensus       421 ~l~~~l~~  428 (429)
T 4e77_A          421 AARRCFAK  428 (429)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHHh
Confidence            99998754

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.97  E-value=3.6e-29  Score=236.52  Aligned_cols=313  Identities=16%  Similarity=0.144  Sum_probs=217.1

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcC
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPK  140 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~  140 (421)
                      .++.+.+++.+.+...   .|.+..+..++|+.++++++        .+++++++||++|+..++.++ .++||+|+++.
T Consensus        15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~   83 (373)
T 3frk_A           15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPS   83 (373)
T ss_dssp             HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEET
T ss_pred             CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence            4677888888887763   46666778999999999984        248999999999999999999 89999999999


Q ss_pred             CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631          141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS  220 (421)
Q Consensus       141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  220 (421)
                      ++|+++...+...|++++.++++++ ++.+|++++++.+++++++++   |+||||...   ++++|.++|+++|+++|+
T Consensus        84 ~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~---~l~~i~~l~~~~~~~li~  156 (373)
T 3frk_A           84 NTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITEKTKAII---AVHLYGQPA---DMDEIKRIAKKYNLKLIE  156 (373)
T ss_dssp             TSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCTTEEEEE---EECCTTCCC---CHHHHHHHHHHHTCEEEE
T ss_pred             CCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCCCCeEEE---EECCCcCcc---cHHHHHHHHHHcCCEEEE
Confidence            9999999999999999999988643 467899999999988887776   778999984   578899999999999999


Q ss_pred             cccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-------
Q 014631          221 DEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-------  290 (421)
Q Consensus       221 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-------  290 (421)
                      |++|+.+. +.+.   .+..+ .   .+.+.|||  |.++.+|. .|++++++       +++.+.+......       
T Consensus       157 D~a~~~g~~~~~~---~~~~~-~---d~~~~S~~~~K~l~~~g~-gg~~~~~~-------~~~~~~~~~~~~~g~~~~~~  221 (373)
T 3frk_A          157 DAAQAHGSLYKGM---KVGSL-G---DAAGFSFYPAKNLGSLGD-GGAVVTND-------KDLAEKIKALSNYGSEKKYH  221 (373)
T ss_dssp             ECTTCTTCEETTE---ETTSS-S---SEEEEECCTTSSSCCSSS-CEEEEESC-------HHHHHHHHHHHBTTCSBTTB
T ss_pred             ECCcccCCEECCE---ecccc-c---cEEEEeCcCCCccCccce-eEEEEeCC-------HHHHHHHHHHHhcCcccCCc
Confidence            99998643 2221   11111 1   26677877  88654343 78888754       2355555433221       


Q ss_pred             ------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCC
Q 014631          291 ------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD  364 (421)
Q Consensus       291 ------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (421)
                            ....+.+...+....+     ..+++..++.+++.+++.+.|.+++ +.+...+.++...|..++...    .+
T Consensus       222 ~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~----~~  291 (373)
T 3frk_A          222 HIYKGFNSRLDELQAGFLRVKL-----KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS----EK  291 (373)
T ss_dssp             CCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE----SS
T ss_pred             cccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe----CC
Confidence                  1112333333322222     3356677788888889999998875 653322332322222121110    13


Q ss_pred             hHHHHHHHHhhcCeeEEeCCCCCC-----------------------CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          365 DMEFALQLAKEESVIVLPGMAVGM-----------------------KNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       365 ~~~~~~~ll~~~gv~v~~g~~~~~-----------------------~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ..++... |.++||.+.++.....                       ...+|++++  ++++|++++++.|+++..++.
T Consensus       292 ~~~l~~~-L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~~  369 (373)
T 3frk_A          292 RDELQKY-LNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEHH  369 (373)
T ss_dssp             HHHHHHH-HHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC----
T ss_pred             HHHHHHH-HHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhhc
Confidence            4555555 4667999987652100                       157999997  899999999999998876653

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.97  E-value=2.1e-28  Score=232.71  Aligned_cols=322  Identities=14%  Similarity=0.144  Sum_probs=222.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      -.++++++.|.|.      .++.+.+++.+.+...   .|. +..+..++|+.++++++.        +++++++||++|
T Consensus        21 ~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~i~~~~gt~a   83 (391)
T 3dr4_A           21 MSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCGV--------KHAIACNNGTTA   83 (391)
T ss_dssp             -------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHTC--------SEEEEESSHHHH
T ss_pred             cCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhCC--------CcEEEeCCHHHH
Confidence            3567889988865      2467888888888763   454 567789999999999842        378899999999


Q ss_pred             HHHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631          122 IQVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       122 l~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~  200 (421)
                      +..++.++ .++||+|+++.|+|+++...+...|++++.+++++ +++.+|++++++.+++++++++   |+||||... 
T Consensus        84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~-  158 (391)
T 3dr4_A           84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQIC-  158 (391)
T ss_dssp             HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCC-
T ss_pred             HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChh-
Confidence            99999999 89999999999999999999999999999998864 3467999999999988787766   678999984 


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                        ++++|.++|+++|+++|+|++|+.+. +.+.   ....+.  +  +.+.|||  |++  +|.+.|++++++       
T Consensus       159 --~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~--d--i~~~S~s~~K~l--~~g~gg~~~~~~-------  220 (391)
T 3dr4_A          159 --DMDPILEVARRHNLLVIEDAAEAVGATYRGK---KSGSLG--D--CATFSFFGNAII--TTGEGGMITTND-------  220 (391)
T ss_dssp             --CHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS--S--EEEEECBTTSSS--CCBSCEEEEESC-------
T ss_pred             --hHHHHHHHHHHcCCEEEEECcccccceECCe---eecccC--C--EEEEECCCCCcC--CcCCeEEEEECC-------
Confidence              58889999999999999999998633 2221   111111  1  6667766  764  446688988864       


Q ss_pred             HHHHHHHhhhcccc---------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          278 LRIVDSIKGYLNIS---------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       278 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                      +++.+.+.......               ...+.+...+  ....   ...+++..++.+++.+++.+.|.++ ++.+..
T Consensus       221 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~--~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  294 (391)
T 3dr4_A          221 DDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAI--GLAQ---LERVDEHLAARERVVGWYEQKLARL-GNRVTK  294 (391)
T ss_dssp             HHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHH--HHHH---HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEEC
T ss_pred             HHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHH--HHHH---HHHHHHHHHHHHHHHHHHHHHhhcC-CccccC
Confidence            33555554332110               1222222222  2221   2345667778888889999999987 776332


Q ss_pred             C--CC---ce-eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC---C-----------------CCCeEEEEe
Q 014631          343 K--PE---GS-MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV---G-----------------MKNWLRITF  396 (421)
Q Consensus       343 ~--~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---~-----------------~~~~iRi~~  396 (421)
                      .  +.   .+ ..+++.++...   ..+..++...| .++||.+.+|...   .                 ....+|+++
T Consensus       295 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~  370 (391)
T 3dr4_A          295 PHVALTGRHVFWMYTVRLGEGL---STTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT  370 (391)
T ss_dssp             CCCCTTSCCCCSSEEEEECSSC---SSCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC
T ss_pred             cCCCCCCcceeEEEEEEECCcc---chhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccC
Confidence            2  11   12 23456665310   11355666655 6679999988521   0                 035789988


Q ss_pred             c--CCHHHHHHHHHHHHHHH
Q 014631          397 A--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       397 ~--~~~e~l~~~~~~l~~~~  414 (421)
                      +  +++||++++++.|++++
T Consensus       371 ~~~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          371 HAGLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             CTTCCHHHHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHHHHHh
Confidence            7  79999999999998754

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.97  E-value=2e-28  Score=233.47  Aligned_cols=326  Identities=12%  Similarity=0.045  Sum_probs=214.1

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-cCCHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL-TAGCKQA  121 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~g~~~a  121 (421)
                      +.+++|+.|.      .++++.+.+++.+..... ....+.+.  ..++.+.+.+.+.+.+|.+ ++++|++ |+|++++
T Consensus        39 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~a  109 (398)
T 2fyf_A           39 PRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQAP--VKNLVGRVRSGLAELFSLP-DGYEVILGNGGATAF  109 (398)
T ss_dssp             CSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSHH--HHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHHH
T ss_pred             cCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCHH--HHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhHH
Confidence            4566776553      257788888887631110 00122111  1233344444444444533 3568998 9999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcc-hHHHHhhc--CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccc
Q 014631          122 IQVILTVLARPGANILLPKPGFPL-YEANARHT--RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNV  198 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~  198 (421)
                      ++.++.+++++| .+.+..+.|.. ....+...  |.+++.++.+  +++..+.     .+++++++|++++|+||||.+
T Consensus       110 l~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~~  181 (398)
T 2fyf_A          110 WDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGVA  181 (398)
T ss_dssp             HHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTEE
T ss_pred             HHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCccee
Confidence            999999998887 22333333321 12234555  7888888875  2322332     246678999999999999999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                      ++.+++.++      +|+++|+|++|+.+..    ...+..     ..+++.|+||+++++| ++||++++        +
T Consensus       182 ~~~~~i~~~------~~~~vivD~a~~~~~~----~~~~~~-----~di~~~s~sK~~~~~g-g~g~l~~~--------~  237 (398)
T 2fyf_A          182 VAVRRPEGS------DDALVVIDATSGAGGL----PVDIAE-----TDAYYFAPQKNFASDG-GLWLAIMS--------P  237 (398)
T ss_dssp             CCCCCCTTC------C-CEEEEECTTTTTTS----CCCGGG-----CSEEEECTTSTTCSCS-SEEEEEEC--------H
T ss_pred             cchHHhhhh------cCCeEEEEeccccCCc----ccCccc-----CcEEEEecCcccCCCC-ceEEEEEC--------H
Confidence            987776665      8999999999987432    112221     2377889999998875 59999985        2


Q ss_pred             HHHHHHhhh----------------------cccccCCchHHHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHHHhhcC
Q 014631          279 RIVDSIKGY----------------------LNISSGPATFVQGAVPQIFKNTKEDF-FSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       279 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      ++++.+...                      .....+++...+.++.++++...+.. +++..++++++++++.+.|+++
T Consensus       238 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~  317 (398)
T 2fyf_A          238 AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER  317 (398)
T ss_dssp             HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            454544211                      11224567777777777776422232 7888999999999999999988


Q ss_pred             CCccccC-CC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631          336 PCITCPR-KP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       336 ~g~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      |++.+.. .|  ..++++|+.++..     .+..++...|. ++||.+.+|......+++|++++  ++++++++++++|
T Consensus       318 ~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~-~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l  391 (398)
T 2fyf_A          318 PYTTPFVTDPGLRSQVVGTIDFVDD-----VDAGTVAKILR-ANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECV  391 (398)
T ss_dssp             TTEEESCCSGGGBCSSEEEEEECTT-----SCHHHHHHHHH-HTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCceeccCChhhcCCcEEEEECCCC-----CCHHHHHHHHH-HCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHH
Confidence            8887331 24  2344888888532     14667777664 55999998743323578999998  6899999999999


Q ss_pred             HHHHHH
Q 014631          411 KAFCQR  416 (421)
Q Consensus       411 ~~~~~~  416 (421)
                      ++++++
T Consensus       392 ~~~l~~  397 (398)
T 2fyf_A          392 DWVVER  397 (398)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            998764

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.96  E-value=1.7e-27  Score=226.85  Aligned_cols=283  Identities=19%  Similarity=0.169  Sum_probs=200.0

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEe
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRH  159 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~  159 (421)
                      +.....++++.++++++      . + +.+++++|++|++.++.++.++||+|+++.|+|+++...+    ...|.++..
T Consensus        63 ~~~~~~~l~~~la~~~g------~-~-~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~  134 (398)
T 1gc0_A           63 SNPTLNLLEARMASLEG------G-E-AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRH  134 (398)
T ss_dssp             CCHHHHHHHHHHHHHHT------C-S-EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred             CChHHHHHHHHHHHHhC------C-C-cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence            34456788999999873      2 2 5556666689999999999999999999999999887665    667888888


Q ss_pred             eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631          160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV  239 (421)
Q Consensus       160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  239 (421)
                      ++.       .|++++++.++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|+.+.+..    ++ .
T Consensus       135 ~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~  199 (398)
T 1gc0_A          135 VDM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E  199 (398)
T ss_dssp             ECT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G
T ss_pred             ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h
Confidence            764       2889999999888999999999999999975   8999999999999999999998765421    22 1


Q ss_pred             cCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHH-HHhhhccc--ccCCchHHHHHHHHHhhccchhHHH
Q 014631          240 FGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVD-SIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       240 ~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      .+   ..+++.|+||.++++|.|+ ||+++++        ++++ .+......  ..+.+++.+.++...++.     +.
T Consensus       200 ~~---~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~  263 (398)
T 1gc0_A          200 LG---ADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LN  263 (398)
T ss_dssp             GT---CSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HH
T ss_pred             hC---ceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HH
Confidence            22   3488899999999999998 9988852        3333 44443322  345677777777666653     34


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCccc-------------cCCC---CceeEEEEecCcccccCCCChHHHHHHHHhhcCee
Q 014631          316 KIVDILRDTADICYDRIKEIPCITC-------------PRKP---EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI  379 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~g~~~-------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~  379 (421)
                      .+.++..++.+.+.+.|.+++++..             +..+   ..+.++.+.++.        ..+.+..++.+.++.
T Consensus       264 ~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~  335 (398)
T 1gc0_A          264 LRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLF  335 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSS
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCc
Confidence            4555666677777777766543321             1111   234455556642        334456677888888


Q ss_pred             EEe---CCC------C----------------CC-CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          380 VLP---GMA------V----------------GM-KNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       380 v~~---g~~------~----------------~~-~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      +..   |..      +                +. ++.+|+|++  +++++++.+.+.|+++
T Consensus       336 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~  397 (398)
T 1gc0_A          336 SRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS  397 (398)
T ss_dssp             EECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             eeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence            765   321      0                11 478999998  5667888777777654

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.96  E-value=1.3e-27  Score=233.77  Aligned_cols=367  Identities=13%  Similarity=0.090  Sum_probs=249.3

Q ss_pred             HHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC
Q 014631           27 VRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK  106 (421)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~  106 (421)
                      ...+...++..+.. .+.+.+++..-.+     .++++.+.+++.+.+... ..+|....+..++++.+.+++.+.+|.+
T Consensus        39 ~~~~~~~~~~~i~l-~gnp~~~l~s~~t-----~~~~~~v~~~l~~~~~~~-~~~~~~~p~~~~le~~~~~~la~l~g~~  111 (502)
T 3hbx_A           39 KEAAYQIINDELML-DGNPRLNLASFVT-----TWMEPECDKLIMSSINKN-YVDMDEYPVTTELQNRCVNMIAHLFNAP  111 (502)
T ss_dssp             HHHHHHHHHHHGGG-SCCGGGBTTCCSC-----CCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhcc-CCCCCceeccccC-----CCCCHHHHHHHHHHhccC-CCChhcChhHHHHHHHHHHHHHHHhCCC
Confidence            44455555544422 2444445443211     245788889988887653 2234444456789999999999988866


Q ss_pred             CCCCcEE---EcCCHHHHHHHHHHHhcCC--------CC-----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631          107 LSPDDVY---LTAGCKQAIQVILTVLARP--------GA-----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV  170 (421)
Q Consensus       107 ~~~~~i~---~~~g~~~al~~~~~~l~~~--------gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  170 (421)
                      .++++++   +|+|+++++.+++.++..+        |+     .|+++.++|.++...++..|++++.+++++ +++.+
T Consensus       112 ~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~  190 (502)
T 3hbx_A          112 LEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVM  190 (502)
T ss_dssp             CCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSC
T ss_pred             cccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcC
Confidence            4455544   5899999999988877554        76     999999999999999999999999999754 34779


Q ss_pred             CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc------CcEEEEccccccccc---CCCCcccccccC
Q 014631          171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL------GIMVISDEVYDHLTF---GSTPYVRMGVFG  241 (421)
Q Consensus       171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~  241 (421)
                      |++++++.+++++++|++++|+||||.+   .++++|.++|+++      |+++++|++|+++..   .+.....+.   
T Consensus       191 d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---  264 (502)
T 3hbx_A          191 DPQQAVDMVDENTICVAAILGSTLNGEF---EDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---  264 (502)
T ss_dssp             CHHHHHHHCCTTEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---
T ss_pred             CHHHHHHHHhhCCEEEEEecCCCCCCcc---cCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC---
Confidence            9999999999999999999999999999   4588888889998      999999999987541   222211111   


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc----------cccCCchHHHHHHHHHhhccch
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN----------ISSGPATFVQGAVPQIFKNTKE  311 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~  311 (421)
                      ...-.++..|.+|+ +.++.++|++++.++..+      .+.+.....          ..++.+.....+...++.....
T Consensus       265 ~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l------~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~  337 (502)
T 3hbx_A          265 LPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDL------PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH  337 (502)
T ss_dssp             STTEEEEEEETTTT-TCCCSSCEEEEESSGGGS------CGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEECcccc-cCCCCCeEEEEEeCHHHh------hHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHH
Confidence            11123556788998 566778999988653211      111110000          0012222222333333432234


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---
Q 014631          312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKP-EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---  387 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---  387 (421)
                      ..+.++.++..++++++.+.|++++++.++ .+ ....++.+.++...   ..+..++...| .++|+.+.....+.   
T Consensus       338 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~v~f~~~~~~---~~~~~~l~~~L-~~~Gi~v~~~~~p~~~~  412 (502)
T 3hbx_A          338 EGYRNVMENCRENMIVLREGLEKTERFNIV-SKDEGVPLVAFSLKDSS---CHTEFEISDML-RRYGWIVPAYTMPPNAQ  412 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEC-SCSSSSSEEEEEESSCS---SCCHHHHHHHH-HTTTCBCCEEECCTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCCCceEEEEEecCCC---cCCHHHHHHHH-HhCCcEEeeccCCcccC
Confidence            567888889999999999999999778844 44 34556667775321   01344666655 67799875433222   


Q ss_pred             CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          388 MKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       388 ~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      ....+|++++  ++.++++.+++.|+++++++++
T Consensus       413 ~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~  446 (502)
T 3hbx_A          413 HITVLRVVIREDFSRTLAERLVIDIEKVMRELDE  446 (502)
T ss_dssp             TCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            2357999998  7899999999999999987754

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.96  E-value=6.4e-28  Score=231.58  Aligned_cols=329  Identities=13%  Similarity=0.042  Sum_probs=210.9

Q ss_pred             CcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCe
Q 014631           62 TTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN  135 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~  135 (421)
                      .++.+.+++.+++.+.....      |........+++...+++.+.+|  .++++|++++| ++++..++.+++++||+
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~  118 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT  118 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence            58999999998885422112      22223334555544444544444  45666656555 78999999999999999


Q ss_pred             EEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 014631          136 ILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKA  211 (421)
Q Consensus       136 Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~  211 (421)
                      |+++.|+|.++.   ......|..+..+++..+.++.+|++++++.+++ +++++++++|+||+  ..   ++++|.++|
T Consensus       119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~---~l~~l~~l~  193 (420)
T 3gbx_A          119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VV---DWAKMREIA  193 (420)
T ss_dssp             EEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CC---CHHHHHHHH
T ss_pred             EEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC--cc---CHHHHHHHH
Confidence            999999998743   2222334433433333334567899999998876 58888888999874  43   388999999


Q ss_pred             HhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc
Q 014631          212 RKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI  290 (421)
Q Consensus       212 ~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (421)
                      ++||+++|+||+|+... +.+.....+..     ..++++|+||+++  |.+.||+++++.-     .++.+.+......
T Consensus       194 ~~~~~~li~De~~~~~~~~~~~~~~~~~~-----~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~~~  261 (420)
T 3gbx_A          194 DSIGAYLFVDMAHVAGLIAAGVYPNPVPH-----AHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAVFP  261 (420)
T ss_dssp             HHTTCEEEEECTTTHHHHHTTSSCCSTTT-----SSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHHC-
T ss_pred             HHcCCEEEEECCcchhceecccCCccccc-----CCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhcCC
Confidence            99999999999986433 33322222211     2388999999974  4556999986311     1355555544322


Q ss_pred             --ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHH
Q 014631          291 --SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF  368 (421)
Q Consensus       291 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (421)
                        .++++...+.++..++......++++..++++++++++.+.|.+. |+.++..+..++++|+.++...     .+.+.
T Consensus       262 ~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----~~~~~  335 (420)
T 3gbx_A          262 SAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN-----LTGKE  335 (420)
T ss_dssp             ---CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT-----CCHHH
T ss_pred             CCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC-----CCHHH
Confidence              224445555555545543334667888899999999999999885 7774423356778888876421     13344


Q ss_pred             HHHHHhhcCeeEEe-------CCCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Q 014631          369 ALQLAKEESVIVLP-------GMAVGMKNWLRITFA------IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       369 ~~~ll~~~gv~v~~-------g~~~~~~~~iRi~~~------~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +..+++++||.+.+       |..|+ ...+|++++      .++++++++++.|++++++.
T Consensus       336 ~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~  396 (420)
T 3gbx_A          336 ADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI  396 (420)
T ss_dssp             HHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence            55566888999998       33333 356999986      24799999999999988653

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.96  E-value=2.7e-28  Score=229.99  Aligned_cols=305  Identities=16%  Similarity=0.182  Sum_probs=219.0

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEc
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLP  139 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~  139 (421)
                      +.++.+.+++.+.+...   .|.+..+..++|+.++++++        .+++++++||++|+..++.++ .++||+|+++
T Consensus        13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~   81 (367)
T 3nyt_A           13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITP   81 (367)
T ss_dssp             HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEEC
Confidence            35678888888888763   45566678899999999984        238999999999999999999 8999999999


Q ss_pred             CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631          140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI  219 (421)
Q Consensus       140 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  219 (421)
                      .++|.++...+...|++++.++++++ .+.+|++++++.+++++++|+   |+||||..   .++++|.++|+++|+++|
T Consensus        82 ~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~---~~~~~i~~la~~~~~~li  154 (367)
T 3nyt_A           82 GFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQC---ADFDAINAIASKYGIPVI  154 (367)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHTTCCBE
T ss_pred             CCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccCh---hhHHHHHHHHHHcCCEEE
Confidence            99999999999999999999988653 367999999999988887766   88899977   558889999999999999


Q ss_pred             Ecccccccc-cCCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-------
Q 014631          220 SDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-------  289 (421)
Q Consensus       220 ~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-------  289 (421)
                      +|++|+.+. +.+..   +..++    .+++.||  +|.++.+|. .|+++.++       +++.+.+.....       
T Consensus       155 ~D~a~~~g~~~~~~~---~~~~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~~g~~~~~  219 (367)
T 3nyt_A          155 EDAAQSFGASYKGKR---SCNLS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIARHGQDRRY  219 (367)
T ss_dssp             EECTTTTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEETT
T ss_pred             EECccccCCeECCee---ccCCC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHhcCCCcCc
Confidence            999998633 33221   11222    2777787  799876576 78888754       346665554322       


Q ss_pred             ------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce----eEEEEecCcccc
Q 014631          290 ------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS----MFVMVKLNLSLL  359 (421)
Q Consensus       290 ------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~----~~~~~~~~~~~~  359 (421)
                            .....+.+...++...++.     +++..++.+++.+++.+.|+++ ++.....+.++    ..+.+.++    
T Consensus       220 ~~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~----  289 (367)
T 3nyt_A          220 HHIRVGVNSRLDTLQAAILLPKLEI-----FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD----  289 (367)
T ss_dssp             EECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS----
T ss_pred             eeeccCcCCCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC----
Confidence                  1223455555555444532     4556667777888888888877 45422222222    12333332    


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCC--------CC-C-----------CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMA--------VG-M-----------KNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~--------~~-~-----------~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                          +...+... |+++||.+.++..        |. .           ...+|+++.  .+++|++++++.|++.
T Consensus       290 ----~~~~l~~~-L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          290 ----NRESVQAS-LKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             ----SHHHHHHH-HHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             ----CHHHHHHH-HHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence                34455554 5677999987653        11 0           246899887  7899999999998765

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.96  E-value=5.3e-27  Score=222.65  Aligned_cols=283  Identities=17%  Similarity=0.192  Sum_probs=198.7

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEe
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRH  159 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~  159 (421)
                      +..+..+++++++++++      .+ +.+++++| ++++..+++++.++||+|+++.|+|++....    +...|.+++.
T Consensus        50 ~~~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~  121 (386)
T 1cs1_A           50 GNPTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLF  121 (386)
T ss_dssp             CCHHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred             CCccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence            34456899999999984      22 56666555 9999999999999999999999999975443    4667888888


Q ss_pred             eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631          160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV  239 (421)
Q Consensus       160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  239 (421)
                      ++.+       |++++++.++++++++++++|+||||.+++   +++|.++|+++|+++|+||+|+.+.+.    .++ .
T Consensus       122 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~----~~~-~  186 (386)
T 1cs1_A          122 VDQG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ----NPL-A  186 (386)
T ss_dssp             ECTT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-G
T ss_pred             eCCC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-c
Confidence            7642       889999998888999999999999999975   889999999999999999999986542    122 2


Q ss_pred             cCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          240 FGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       240 ~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      +   +..+++.|+||+++.+|.|+ ||+++++       +++.+.+...... ..+.+++.+.++...++.     +...
T Consensus       187 ~---~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~  251 (386)
T 1cs1_A          187 L---GADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPR  251 (386)
T ss_dssp             G---TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHH
T ss_pred             c---CceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----HHHH
Confidence            2   24588999999999999887 9999863       2466666554432 345677777766565542     4455


Q ss_pred             HHHHHHHHHHHHHHhhcCCCccccCCC----------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE
Q 014631          318 VDILRDTADICYDRIKEIPCITCPRKP----------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL  381 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  381 (421)
                      .+...++++.+.+.|++++.+.....+                ..+.++.+.++.       ...+ +...+.++||.+.
T Consensus       252 ~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~l~~~gi~~~  323 (386)
T 1cs1_A          252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------DEQT-LRRFLGGLSLFTL  323 (386)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------CHHH-HHHHHHTCSSSEE
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------CHHH-HHHHHHhCCcceE
Confidence            666777788888888776443211011                124455556642       2233 4455678899887


Q ss_pred             eCCCC-------------------------C-CCCeEEEEecC--CHHHHHHHHHHHHH
Q 014631          382 PGMAV-------------------------G-MKNWLRITFAI--EPSALEEGLGRIKA  412 (421)
Q Consensus       382 ~g~~~-------------------------~-~~~~iRi~~~~--~~e~l~~~~~~l~~  412 (421)
                      +.+.-                         + .++++|++++.  ++++++.+.+.|++
T Consensus       324 ~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~  382 (386)
T 1cs1_A          324 AESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA  382 (386)
T ss_dssp             BSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             cccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence            42110                         1 14789999984  34455555444443

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.96  E-value=2.9e-27  Score=219.68  Aligned_cols=277  Identities=14%  Similarity=0.094  Sum_probs=194.4

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCC
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPE  165 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~  165 (421)
                      ++++.++++++      .+ +.++ +++|++++..++.++.++||+|+++.|+|+++...+    ...|.+++.++.   
T Consensus         2 ~l~~~la~~~g------~~-~~i~-~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---   70 (331)
T 1pff_A            2 ALEGKIAKLEH------AE-ACAA-TASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHHT------CS-EEEE-ESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             hHHHHHHHHhC------CC-eEEE-eCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence            68999999984      33 4454 455589999999998899999999999999886665    457888888764   


Q ss_pred             CCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh-cCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK-LGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       166 ~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                          .|++++++.++++++++++++|+||||.+++   +++|.++|++ +|+++|+|++|+.+.+.    .++ .+   +
T Consensus        71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~~---~  135 (331)
T 1pff_A           71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-DL---G  135 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-GG---T
T ss_pred             ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-hc---C
Confidence                3788999999888999999999999999985   8899999999 99999999999875432    122 22   3


Q ss_pred             CEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          245 PVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                      ..+++.|+||+|+++|.| +||+++++       +++.+.+......  ..+.+++.+.++...++.     ...+.+..
T Consensus       136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~  203 (331)
T 1pff_A          136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA  203 (331)
T ss_dssp             CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred             CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence            458899999999999999 79999852       2577777766543  346777777766555542     22223333


Q ss_pred             HHHHHHHHHHhhcC--------------CCccccC--CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC
Q 014631          322 RDTADICYDRIKEI--------------PCITCPR--KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA  385 (421)
Q Consensus       322 ~~~~~~~~~~l~~~--------------~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~  385 (421)
                      .++.+.+.+.+++.              |++.+..  ....+.++.+.++        +..+ +..++.++||.+.+.+.
T Consensus       204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~l~~~gI~~~~~s~  274 (331)
T 1pff_A          204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEK-AKKVLDNCHVVSLAVSL  274 (331)
T ss_dssp             HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHH-HHHHHHTCSSSEECSSC
T ss_pred             HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHH-HHHHHHhCCCceeccCC
Confidence            34444444444322              2322110  0112445666664        2333 44566788998866521


Q ss_pred             -------------------------CCC-CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          386 -------------------------VGM-KNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       386 -------------------------~~~-~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                                               ++. ++.+|++++  +++++++.+++.|+++
T Consensus       275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~  330 (331)
T 1pff_A          275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV  330 (331)
T ss_dssp             CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred             CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence                                     112 479999998  6678888888887653

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.5e-27  Score=227.34  Aligned_cols=285  Identities=15%  Similarity=0.119  Sum_probs=199.0

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----cCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----TRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~  163 (421)
                      ..+|++.++++.    |    .+++++++||++|+..++.+++++||+|++++|+|+++...+..    .|.+++.++.+
T Consensus        83 ~~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  154 (414)
T 3ndn_A           83 VSVFEERLRLIE----G----APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD  154 (414)
T ss_dssp             HHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             HHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence            456666666665    2    35789999999999999999999999999999999998766644    89999888753


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                             |++++++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|+.....    .++ ..+  
T Consensus       155 -------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g--  217 (414)
T 3ndn_A          155 -------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLG--  217 (414)
T ss_dssp             -------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGT--
T ss_pred             -------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcC--
Confidence                   889999999989999999999999999955   889999999999999999999853321    122 222  


Q ss_pred             CCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHH-HHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631          244 VPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVD-SIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDI  320 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  320 (421)
                       ..+++.|+||.++.+| +++|++++++        +.+. .+..... ...+.++....++...++     .+..+.++
T Consensus       218 -~div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~r~~~  283 (414)
T 3ndn_A          218 -VDVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE-----TLAIRVQH  283 (414)
T ss_dssp             -CSEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG-----GHHHHHHH
T ss_pred             -CCeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH-----HHHHHHHH
Confidence             2378899999998878 8999999863        2332 3443222 223445554444433333     35566677


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC
Q 014631          321 LRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM  384 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~  384 (421)
                      ..++++.+.+.|++.|++..+..|.                .|.+++++++............++.. ++..++.+..|.
T Consensus       284 ~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~s~G~  362 (414)
T 3ndn_A          284 SNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDK-MRLIDISNNLGD  362 (414)
T ss_dssp             HHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHH-CSSSEECSCCSC
T ss_pred             HHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHh-CccceEcCCCCC
Confidence            7888889999999887764333332                46688888863100000013445544 455677777776


Q ss_pred             CCC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          385 AVG-----------------------MKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       385 ~~~-----------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      .+.                       .++.+|+|++.  |+.+.+++.|.+++
T Consensus       363 ~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al  413 (414)
T 3ndn_A          363 AKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL  413 (414)
T ss_dssp             SSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred             CCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence            431                       14689999984  34455556665554

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.96  E-value=8.4e-27  Score=228.81  Aligned_cols=330  Identities=10%  Similarity=0.026  Sum_probs=226.0

Q ss_pred             HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC--------CC-----C
Q 014631           68 DAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR--------PG-----A  134 (421)
Q Consensus        68 ~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--------~g-----d  134 (421)
                      +.+...++. +...|....+..++++.+.+++.+.+|.+.+++++++|+|+++|+..++.++..        +|     +
T Consensus       111 ~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~  189 (504)
T 2okj_A          111 EWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK  189 (504)
T ss_dssp             HHHHHHHCC-BSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred             HHHHHhhcc-CCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence            444444433 334566555567889999888888877554478999999999999999888742        56     6


Q ss_pred             -eEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHH
Q 014631          135 -NILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQL  204 (421)
Q Consensus       135 -~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l  204 (421)
                       .|+++.++|+++...+...|.   +++.+|.+  .++.+|+++|++.+.+      ++++|++++|+||||.+   +++
T Consensus       190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~~l  264 (504)
T 2okj_A          190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---DPI  264 (504)
T ss_dssp             EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---CCH
T ss_pred             eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---CCH
Confidence             789999999999999988877   78888864  3577999999998865      47888999999999999   558


Q ss_pred             HHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          205 QKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      ++|+++|++||+++++|++|+.+.+..... ..+..+.  ...+++.|+||+++.| .++|+++++++.       +.+.
T Consensus       265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~--~~D~i~~~~hK~~~~p-~~~g~l~~~~~~-------~~~~  334 (504)
T 2okj_A          265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG-------ILQG  334 (504)
T ss_dssp             HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT-------HHHH
T ss_pred             HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc--cCCEEEECchhhcCCC-cceEEEEEECHH-------HHHH
Confidence            899999999999999999999876532221 1222221  1126677899997655 689999997532       3232


Q ss_pred             -Hhhhcccc-c--------------------CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631          284 -IKGYLNIS-S--------------------GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP  341 (421)
Q Consensus       284 -~~~~~~~~-~--------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  341 (421)
                       +....... .                    ....+.+.++..++.   ..++.++.++..++++++.+.|+++|++.++
T Consensus       335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  411 (504)
T 2okj_A          335 CNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMV  411 (504)
T ss_dssp             HHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred             HhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence             11111000 0                    012444555544443   4668888899999999999999998898854


Q ss_pred             C--CCCceeEEEEecCccccc--CC--------CChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec---CCHHHHHH
Q 014631          342 R--KPEGSMFVMVKLNLSLLE--GI--------SDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA---IEPSALEE  405 (421)
Q Consensus       342 ~--~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~---~~~e~l~~  405 (421)
                      .  .|..+++.+...+.....  ..        .....+...+ .+.|+.+..+..+.. .+++|++++   ++++++++
T Consensus       412 ~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~  490 (504)
T 2okj_A          412 FNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALM-MESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDF  490 (504)
T ss_dssp             SSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHH
T ss_pred             ecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHH-HhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHH
Confidence            3  366666554433321000  00        0023455555 455754433222322 358999996   68999999


Q ss_pred             HHHHHHHHHHHh
Q 014631          406 GLGRIKAFCQRH  417 (421)
Q Consensus       406 ~~~~l~~~~~~~  417 (421)
                      ++++|+++++++
T Consensus       491 ~~~~l~~~~~~~  502 (504)
T 2okj_A          491 LIEEIERLGQDL  502 (504)
T ss_dssp             HHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHH
Confidence            999999987654

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.96  E-value=1.6e-26  Score=221.13  Aligned_cols=308  Identities=16%  Similarity=0.136  Sum_probs=212.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      ++.++.+.+++.   .. ..+.|+..  ....++++.++++++        .+++++++|+++|++.++.++.++||+|+
T Consensus        32 ~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~vi   99 (412)
T 2cb1_A           32 FKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEVV   99 (412)
T ss_dssp             CSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred             cCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            566666666553   22 22456533  446789999999883        24899999999999999999999999999


Q ss_pred             EcCCCCcchHHH----HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631          138 LPKPGFPLYEAN----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK  213 (421)
Q Consensus       138 ~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~  213 (421)
                      ++.|+|.++...    +...|.+++.++.        |++++++.+++++++|++++|+||||.+++   +++|.++|++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~  168 (412)
T 2cb1_A          100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE  168 (412)
T ss_dssp             EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred             EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence            999999876554    3457888888763        488999999888999999999999999975   8999999999


Q ss_pred             cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcc------hh-----------
Q 014631          214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI------LQ-----------  276 (421)
Q Consensus       214 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~------~~-----------  276 (421)
                      ||+++|+|++|+.+.+...   +. ..   +..+++.|+||+++.+|.|+|++++.++...      ..           
T Consensus       169 ~~~~li~D~~~~~~~~~~~---~~-~~---~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  241 (412)
T 2cb1_A          169 AGVALVVDNTFGAAGALCR---PL-AW---GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE  241 (412)
T ss_dssp             HTCEEEEECGGGTTTTSCC---GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred             cCCEEEEECCCccccccCC---cc-cc---CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence            9999999999987522111   11 12   2348899999999999999999988653210      00           


Q ss_pred             ---HHHHHHHHhhhc-ccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC------
Q 014631          277 ---ELRIVDSIKGYL-NIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE------  345 (421)
Q Consensus       277 ---~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~------  345 (421)
                         ..++.+.++... ... ...++.....+...++.     +..+.++..++.+++.+.|.+.+++..+..|.      
T Consensus       242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~  316 (412)
T 2cb1_A          242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA  316 (412)
T ss_dssp             HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence               002334443332 111 12344444443333432     34555666788889999999888876332231      


Q ss_pred             ----------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC---------CCC----------------C-C
Q 014631          346 ----------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM---------AVG----------------M-K  389 (421)
Q Consensus       346 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~---------~~~----------------~-~  389 (421)
                                .+.++.+.+ .       +... +..++.+.||.+ .++         .+.                . +
T Consensus       317 ~~~~~~~~~~~~~iv~~~~-~-------~~~~-~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~  386 (412)
T 2cb1_A          317 HRNARKYLASGGPILTLDL-G-------DLER-ASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTP  386 (412)
T ss_dssp             HHHHHHHCSSSCSEEEEEC-S-------SHHH-HHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCT
T ss_pred             HHHHHHhCCCCceEEEEEe-C-------CHHH-HHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCC
Confidence                      234555556 2       2333 445667789998 774         221                0 4


Q ss_pred             CeEEEEec--CCHHHHHHHHHHHHH
Q 014631          390 NWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       390 ~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      +.+|+|++  +++++++.+.++|++
T Consensus       387 ~~iR~s~g~~~~~~~i~~l~~al~~  411 (412)
T 2cb1_A          387 GLVRVSVGLEDPLDLLALFEEALEA  411 (412)
T ss_dssp             TEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred             CeEEEEeccCCHHHHHHHHHHHHhh
Confidence            78999998  667888888887754

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.96  E-value=4e-28  Score=229.68  Aligned_cols=299  Identities=12%  Similarity=0.136  Sum_probs=210.8

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH--HHHhhcC--ceeEeeeccCC
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE--ANARHTR--LEIRHFDLLPE  165 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g--~~~~~~~~~~~  165 (421)
                      ++.+.+++.+.+.+|  .+ +.+++|+|+|++++.++..+ ++||+|++.+++|+++.  ..+...|  .+++.++.+..
T Consensus        35 ~~~~~~~~~l~~~~~--~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  110 (379)
T 3ke3_A           35 EVMNDLLSNLKTVYN--AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT  110 (379)
T ss_dssp             HHHHHHHHHHHHHHT--CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred             HHHHHHHHHHHHHhC--CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence            344444444444444  33 68899999999999998665 69999999999998753  3445555  36677765431


Q ss_pred             ------CC-ccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc
Q 014631          166 ------KG-WEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM  237 (421)
Q Consensus       166 ------~~-~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~  237 (421)
                            .. ..+|++++++.+. ++++++++++++|+||.+++.+++++|.++|++||+++|+|++++ .   +. ...+
T Consensus       111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~~-~~~~  185 (379)
T 3ke3_A          111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---CV-WLDM  185 (379)
T ss_dssp             SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---TC-CCCH
T ss_pred             ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---Cc-cccc
Confidence                  11 1479999999885 478899999999999999999999999999999999999999986 2   22 2233


Q ss_pred             cccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc----------------------c-cccCC
Q 014631          238 GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL----------------------N-ISSGP  294 (421)
Q Consensus       238 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----------------------~-~~~~~  294 (421)
                      ..++.+   +++.|++|+++.+ .++|+++++        +++.+.+....                      . ..+++
T Consensus       186 ~~~~~d---~~~~s~~K~l~~~-~g~g~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~  253 (379)
T 3ke3_A          186 KELGID---VLISAPQKGWSST-PCAGLVMLS--------AAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATM  253 (379)
T ss_dssp             HHHTCS---EEEECTTTTTCSC-CCEEEEEEC--------HHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCC
T ss_pred             cccCCC---EEEecchhhcCCC-CceEEEEEC--------HHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCC
Confidence            333332   7788999986543 358999985        24444443211                      0 12367


Q ss_pred             chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc--ee-EEEEecCcccccCCCChHHHHHH
Q 014631          295 ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG--SM-FVMVKLNLSLLEGISDDMEFALQ  371 (421)
Q Consensus       295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~  371 (421)
                      +...+.++.++++...+..++++.++++++++++++.|+++ |+.+. .+..  +. ...+..+.       ....+ ..
T Consensus       254 ~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~-~~~~~~~~~i~~~~~~~-------~~~~~-~~  323 (379)
T 3ke3_A          254 PTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESV-AAEGFEAPGVVVSYTER-------DDMHK-GS  323 (379)
T ss_dssp             CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-BCTTCBCSSEEEEECSC-------HHHHS-SH
T ss_pred             CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEec-CCccccCceEEEEccCC-------cchHH-HH
Confidence            77788888788765444557888899999999999999988 77743 3321  22 22223321       11122 34


Q ss_pred             HHhhcCeeEEeCCCCCC-----CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631          372 LAKEESVIVLPGMAVGM-----KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       372 ll~~~gv~v~~g~~~~~-----~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .+.++||.+.+|..+..     .+.+|++++  +++++|++++++|+++++++..
T Consensus       324 ~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~~  378 (379)
T 3ke3_A          324 AFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVLA  378 (379)
T ss_dssp             HHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhcc
Confidence            45778999999986542     578999997  7899999999999999988753

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.96  E-value=7.2e-29  Score=241.56  Aligned_cols=330  Identities=15%  Similarity=0.146  Sum_probs=213.4

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC-----C----C
Q 014631           64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP-----G----A  134 (421)
Q Consensus        64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~-----g----d  134 (421)
                      +.+.+++.+++..+. ..|++..+..+++++++++++        .+++++|+|+++|+..++.++.++     |    |
T Consensus        53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d  123 (467)
T 2oqx_A           53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK  123 (467)
T ss_dssp             SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred             HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence            667788888776532 368777778899999999983        368999999999999999998888     8    9


Q ss_pred             eEEEcCCCCcchHHHHhhcCceeEeeec----cCC----CCccCCHHHHHhhhc----cCceEEEEeCCCCCc-ccccCH
Q 014631          135 NILLPKPGFPLYEANARHTRLEIRHFDL----LPE----KGWEVDLDGLEALAD----ENTVAMVIVNPGNPC-GNVFTY  201 (421)
Q Consensus       135 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~----~~~----~~~~~d~e~l~~~~~----~~~~~i~~~~p~npt-G~~~~~  201 (421)
                      +|++..+.|.++.......|..+.....    +.+    .++.+|+++|++.+.    +++++|++++|+||+ |.+++.
T Consensus       124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~  203 (467)
T 2oqx_A          124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL  203 (467)
T ss_dssp             CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred             eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence            9887743334444455555665443211    111    234689999999886    368899999999998 899999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccc----------cccCCCCcccccc--cCCCCCEEEEcccccccCCC-CceEEEEEe
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDH----------LTFGSTPYVRMGV--FGSTVPVITLGSMSKRWIVP-GWRLGWLVT  268 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~  268 (421)
                      +++++|+++|++||+++|+|+++..          ..+.|.....+..  ....+  +++.|+||+++++ |   ||+++
T Consensus       204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~  278 (467)
T 2oqx_A          204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCM  278 (467)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEe
Confidence            9999999999999999999977654          1233332212210  01112  4567999998766 4   77777


Q ss_pred             eCCCcchhHHHHHHHHhhhc---c---cccCCchHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631          269 SDPSGILQELRIVDSIKGYL---N---ISSGPATFVQGAVPQIFKNTKEDFF-SKIVDILRDTADICYDRIKEIPCITCP  341 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~g~~~~  341 (421)
                      ++.. +.   +....+....   .   .....+.....++...+..    ++ ++..++.+++++++.+.|+++ ++. +
T Consensus       279 ~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~  348 (467)
T 2oqx_A          279 KDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD----GMNLDWLAYRIAQVQYLVDGLEEI-GVV-C  348 (467)
T ss_dssp             CSGG-GH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHT-TCC-E
T ss_pred             cChh-HH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHC-CCe-e
Confidence            5320 11   2333333321   1   0111222222222222221    11 123344567788888999887 777 4


Q ss_pred             CCCCceeEEEEecCc--ccccCCCC-hHHHHHHHHhhcCeeEEeCCCC--C-----------CCCeEEEEec---CCHHH
Q 014631          342 RKPEGSMFVMVKLNL--SLLEGISD-DMEFALQLAKEESVIVLPGMAV--G-----------MKNWLRITFA---IEPSA  402 (421)
Q Consensus       342 ~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~ll~~~gv~v~~g~~~--~-----------~~~~iRi~~~---~~~e~  402 (421)
                      . |.+++++|+.++.  .......- ...++..|+.++||.+.|+..|  +           ..+++|++++   +++++
T Consensus       349 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~  427 (467)
T 2oqx_A          349 Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTH  427 (467)
T ss_dssp             E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHH
T ss_pred             e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHH
Confidence            4 6778899988742  11100000 2344666657889999985432  1           1378999998   68999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 014631          403 LEEGLGRIKAFCQRHA  418 (421)
Q Consensus       403 l~~~~~~l~~~~~~~~  418 (421)
                      +++++++|++++++..
T Consensus       428 i~~~~~~l~~~l~~~~  443 (467)
T 2oqx_A          428 MDFIIEAFKHVKENAA  443 (467)
T ss_dssp             HHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhh
Confidence            9999999999987654

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.96  E-value=2.5e-27  Score=232.17  Aligned_cols=338  Identities=17%  Similarity=0.142  Sum_probs=228.6

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh----c------
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL----A------  130 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~------  130 (421)
                      +.++.+.+++.....+.+...|....+..++++.+.+++.+.+|.+ ..+.+++|+|+++++..++.++    .      
T Consensus       111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~  189 (497)
T 2qma_A          111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH  189 (497)
T ss_dssp             CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence            5677787777665555444456555566789999888888888754 2378999999999999988773    2      


Q ss_pred             ---CC------CC-eEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhccC----ce--EEEEeCC
Q 014631          131 ---RP------GA-NILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADEN----TV--AMVIVNP  191 (421)
Q Consensus       131 ---~~------gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~~----~~--~i~~~~p  191 (421)
                         ++      || .|+++.++|+++...+...|.   +++.+|.+  .++.+|+++|++.++++    ++  +++++++
T Consensus       190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~  267 (497)
T 2qma_A          190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG  267 (497)
T ss_dssp             CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence               12      46 799999999999999888876   68888874  35679999999988653    33  7788899


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      +||||.+   +++++|+++|++||+++++|++|+.+.+.......+..+.  ...+++.|+||+++.| .++|+++++++
T Consensus       268 ~~~tG~~---~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~~~~~  341 (497)
T 2qma_A          268 TTDHGAI---DDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALLVNDK  341 (497)
T ss_dssp             CTTTCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEEESCG
T ss_pred             CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcc--cCCEEEEcchhccCCC-cceEEEEEeCH
Confidence            9999998   6689999999999999999999998765332111122221  1126677899997665 68999999754


Q ss_pred             CcchhHHHHHHHHhhhccc-cc----CCchHH----------HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          272 SGILQELRIVDSIKGYLNI-SS----GPATFV----------QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~-~~----~~~~~~----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      ..       ++.+.....+ ..    .++...          ..++..++......++.++.++..++++++.+.|+++|
T Consensus       342 ~~-------~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~  414 (497)
T 2qma_A          342 SN-------FKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTND  414 (497)
T ss_dssp             GG-------GGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             HH-------HHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            31       1111110000 00    011110          11122233333356788888999999999999999988


Q ss_pred             CccccCCCCceeEEEEecCcccccCCC-ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGIS-DDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIKA  412 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~  412 (421)
                      ++.++..|..+ ++++++..... ... -..++... +.+.|+.+.++..+....++|+++ +  +++++++++++.|++
T Consensus       415 ~~~~~~~~~~~-~v~f~~~~~~~-~~~~l~~~l~~~-l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~  491 (497)
T 2qma_A          415 QFELLAEPSLS-TVLFRATHETA-DLDELNKALRLE-ALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINM  491 (497)
T ss_dssp             TEEECSCCSSS-EEEEEECCSSS-CHHHHHHHHHHH-HHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CeEEEcCCCce-EEEEEEcCCcc-CHHHHHHHHHHH-HHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence            98844445544 56666643110 000 01234444 456699887655454456899998 4  789999999999999


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      +++++
T Consensus       492 ~~~~~  496 (497)
T 2qma_A          492 LAVEL  496 (497)
T ss_dssp             HHHHC
T ss_pred             HHHhh
Confidence            88764

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.96  E-value=1.3e-26  Score=220.56  Aligned_cols=312  Identities=13%  Similarity=0.130  Sum_probs=213.5

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCC--CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEE
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVG--ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILL  138 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g--~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~  138 (421)
                      .++++.+++.+.+..    .|.+..|  ..++|++++++++        .+++++++|++++++.++.++ .++||+|++
T Consensus        10 ~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~   77 (394)
T 1o69_A           10 MGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLA   77 (394)
T ss_dssp             --CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred             CCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEE
Confidence            345678888888865    3555556  7899999999983        268999999999999999999 899999999


Q ss_pred             cCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631          139 PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG  215 (421)
Q Consensus       139 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~  215 (421)
                      +.|+|+++...+...|++++.++++  +++.+|++++++.+++   ++++|++++   |||..   .++++|.++|+++|
T Consensus        78 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~  149 (394)
T 1o69_A           78 SSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEICKEND  149 (394)
T ss_dssp             ESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTT
T ss_pred             CCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHHHHHcC
Confidence            9999999999999999999999875  4567999999998876   688888875   89976   67899999999999


Q ss_pred             cEEEEccccc-ccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccccc-C
Q 014631          216 IMVISDEVYD-HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-G  293 (421)
Q Consensus       216 ~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  293 (421)
                      +++|+|++|+ ++.+.+...   ..+.  +  +.+.||||..+++|.|+||+++++       +++.+.+........ .
T Consensus       150 ~~li~Dea~~~g~~~~~~~~---~~~~--~--~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~  215 (394)
T 1o69_A          150 IVLIEDAAEALGSFYKNKAL---GTFG--E--FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYSTQAREN  215 (394)
T ss_dssp             CEEEEECTTCTTCEETTEET---TSSS--S--EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTBTCCCS
T ss_pred             CEEEEECcCcccceeCCccc---cccc--C--cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHHhcccc
Confidence            9999999998 444433211   1111  1  445556433345577899999953       346666654322110 0


Q ss_pred             --------------CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----cee-EEEEec
Q 014631          294 --------------PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----GSM-FVMVKL  354 (421)
Q Consensus       294 --------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----~~~-~~~~~~  354 (421)
                                    .+.+...++...+     +++++..++.+++++++.+.|+++  +.+. .+.    .++ .+++.+
T Consensus       216 ~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~i~~  287 (394)
T 1o69_A          216 CLHYEHLDYGYNYRLSNVLGAIGVAQM-----EVLEQRVLKKREIYEWYKEFLGEY--FSFL-DELENSRSNRWLSTALI  287 (394)
T ss_dssp             SSSCCCSSCCCBCBCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTT--EECC-CCCTTEECCCSSEEEEE
T ss_pred             CccccccccCcccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccc--cccc-CCCCCCcceeEEEEEEe
Confidence                          1222222222222     336667788889999999999876  5522 221    232 356666


Q ss_pred             Cccc--------------ccC--CCChHHHHHHHHhhcCeeEEeCCCCCC-----C---------------CeEEEEec-
Q 014631          355 NLSL--------------LEG--ISDDMEFALQLAKEESVIVLPGMAVGM-----K---------------NWLRITFA-  397 (421)
Q Consensus       355 ~~~~--------------~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~---------------~~iRi~~~-  397 (421)
                      +...              .+.  ..+..++... |.++||.+++|..+..     .               ..+|+..+ 
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (394)
T 1o69_A          288 NFDKNELNACQKDINISQKNITLHPKISKLIED-LKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGT  366 (394)
T ss_dssp             SCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHH-HHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCT
T ss_pred             cchhhccccccccccccccccccccCHHHHHHH-HHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCC
Confidence            5210              000  0023455554 4678999999853300     1               23444444 


Q ss_pred             -CCHHHHHHHHHHHHHHHHH
Q 014631          398 -IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~~~  416 (421)
                       ++++|++++++.|+++++.
T Consensus       367 ~~t~edi~~~~~~l~~~~~~  386 (394)
T 1o69_A          367 AMSKDDVYEISKLILKSIKA  386 (394)
T ss_dssp             TCCHHHHHHHHHHHHHHHC-
T ss_pred             CCCHHHHHHHHHHHHHHHhc
Confidence             7899999999999988643

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.96  E-value=2e-27  Score=232.25  Aligned_cols=334  Identities=10%  Similarity=0.060  Sum_probs=229.9

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-------CCcEEEcCCHHHHHHHHHHHhcCC--
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-------PDDVYLTAGCKQAIQVILTVLARP--  132 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-------~~~i~~~~g~~~al~~~~~~l~~~--  132 (421)
                      .+..+.+++...+.. ....|....+..++++.+++|+.+.+|.+.+       ...+++|+|+|+|+..++.++.++  
T Consensus        86 ~~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~  164 (486)
T 1js3_A           86 YPAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV  164 (486)
T ss_dssp             HHHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHh
Confidence            345577777777644 3345655556789999999999998886532       356899999999999888765321  


Q ss_pred             -------CC--------e--EEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCce------EEEEe
Q 014631          133 -------GA--------N--ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV------AMVIV  189 (421)
Q Consensus       133 -------gd--------~--Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~------~i~~~  189 (421)
                             ||        .  |+++.++|+++...++..|++++.++++  .++.+|+++|++.+.++++      +++++
T Consensus       165 ~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~  242 (486)
T 1js3_A          165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT  242 (486)
T ss_dssp             HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEe
Confidence                   43        3  7889999999999999999999999874  4677999999999876553      78899


Q ss_pred             CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      +|+||||.+   +++++|+++|++||+++++|++|+.+.+....... +..+..- . .+..++||+++.| .++|++++
T Consensus       243 ~~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~a-d-si~~~~hK~~~~p-~~~G~l~~  316 (486)
T 1js3_A          243 LGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA-D-SFNFNPHKWLLVN-FDCSAMWV  316 (486)
T ss_dssp             BSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC-S-EEEECHHHHSSCC-SSCEEEEE
T ss_pred             CCCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcccc-C-eeEEchhhhcCCC-cceEEEEE
Confidence            999999988   77999999999999999999999886532211111 1112111 2 4456899997665 78999999


Q ss_pred             eCCCcchhHHHHHHHHhh---hcc------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631          269 SDPSGILQELRIVDSIKG---YLN------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI  327 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~---~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  327 (421)
                      +++..      +.+.+..   +..                  .......+.+.++...+   ...++++..++..+++++
T Consensus       317 ~~~~~------l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~---g~~g~~~~~~~~~~~a~~  387 (486)
T 1js3_A          317 KRRTD------LTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY---GVKGLQAYIRKHVQLSHE  387 (486)
T ss_dssp             SCHHH------HHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred             eCHHH------HHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH---hHHHHHHHHHHHHHHHHH
Confidence            75321      1222210   000                  00011223343333333   346788889999999999


Q ss_pred             HHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHH
Q 014631          328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALE  404 (421)
Q Consensus       328 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~  404 (421)
                      +.+.|+++|++.++..|..+.+ .+.++...    ....++...+. +.|+.+.++..+....++|++++   +++++++
T Consensus       388 l~~~L~~~~~~~~~~~~~~~~v-~f~~~~~~----~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~  461 (486)
T 1js3_A          388 FEAFVLQDPRFEVCAEVTLGLV-CFRLKGSD----GLNEALLERIN-SARKIHLVPCRLRGQFVLRFAICSRKVESGHVR  461 (486)
T ss_dssp             HHHHHHHCTTEEECSCCCSSEE-EEEESSCH----HHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHH
T ss_pred             HHHHHhcCCCeEEeCCCceeEE-EEEecChH----HHHHHHHHHHH-hcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHH
Confidence            9999999989985434554443 34554210    01355666664 45755433333444678999975   5789999


Q ss_pred             HHHHHHHHHHHHhhh
Q 014631          405 EGLGRIKAFCQRHAK  419 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~  419 (421)
                      +++++|+++++++.+
T Consensus       462 ~~~~~l~~~~~~~~~  476 (486)
T 1js3_A          462 LAWEHIRGLAAELLA  476 (486)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999877654

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.96  E-value=2.6e-26  Score=217.90  Aligned_cols=283  Identities=17%  Similarity=0.141  Sum_probs=202.5

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~  161 (421)
                      ....++++.++++++        .+++++++||++|++.++..+.++||+|+++.++|+++...+    ...|.++..++
T Consensus        66 ~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~  137 (392)
T 3qhx_A           66 PTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA  137 (392)
T ss_dssp             HHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence            345688888888873        237889999999999999999999999999999999876655    66788888887


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      .+       |++++++.+++++++|++.+|+||||.+.+   +++|.++|++||+++|+|++|+.... ..   ++ .++
T Consensus       138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~-~~---~~-~~~  202 (392)
T 3qhx_A          138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL-QQ---PL-SLG  202 (392)
T ss_dssp             TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CC---GG-GGT
T ss_pred             CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc-CC---hH-HhC
Confidence            53       889999999989999999999999999965   99999999999999999999986421 11   11 222


Q ss_pred             CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                         ..+++.|+||.++.+| .++||+++++       +++.+.+..... ...+.++..+.++...++.     +..+.+
T Consensus       203 ---~di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~~~  267 (392)
T 3qhx_A          203 ---ADVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLRMQ  267 (392)
T ss_dssp             ---CSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred             ---CcEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHH
Confidence               2388999999998877 7899999864       346666655443 3346677777776666653     445566


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG  383 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  383 (421)
                      +..++.+.+.+.|+++|.+..+..|.                .|.++++.++...    .....++.. ++..++.+..|
T Consensus       268 ~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----~~~~~~~~~-l~~~~~~~s~G  342 (392)
T 3qhx_A          268 RHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----TAAEQLCAK-TNIFILAESLG  342 (392)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----HHHHHHHHH-CSSSEECSCCC
T ss_pred             HHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----HHHHHHHHh-CCCceECCCCC
Confidence            67788888888888877654232221                2557778886411    023444443 46667777776


Q ss_pred             CCCC--------------------CCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          384 MAVG--------------------MKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       384 ~~~~--------------------~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      +.+.                    .++.+|+|++.  |+.+..++.|.++
T Consensus       343 ~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~a  390 (392)
T 3qhx_A          343 SVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQA  390 (392)
T ss_dssp             CSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHH
T ss_pred             CCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHH
Confidence            6531                    14679999983  2333344444443

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.96  E-value=1.9e-26  Score=220.89  Aligned_cols=284  Identities=15%  Similarity=0.127  Sum_probs=200.0

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~  162 (421)
                      ...++|+.++++++      . ++.+++++| +++++.++.+++++||+|+++.+.|.++...    +...|.+++.++.
T Consensus       115 ~~~~l~~~lA~l~g------~-~~~v~~~sG-~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~  186 (445)
T 1qgn_A          115 TTVVLEEKISALEG------A-ESTLLMASG-MCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP  186 (445)
T ss_dssp             HHHHHHHHHHHHHT------C-SEEEEESCH-HHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred             HHHHHHHHHHHHhC------C-CcEEEeCCH-HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence            34689999999873      2 245555555 5999999999999999999999999987653    5667988888864


Q ss_pred             cCCCCccCCHHHHHhhhccCc-eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          163 LPEKGWEVDLDGLEALADENT-VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      +       |++++++.+++++ ++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+....    ..++ .++
T Consensus       187 ~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~----~~~~-~~g  251 (445)
T 1qgn_A          187 A-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN----QKAL-ALG  251 (445)
T ss_dssp             S-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCTT-TTT
T ss_pred             C-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCcc-ccC
Confidence            2       8899999998888 99999999999999975   78999999999999999999986432    1111 222


Q ss_pred             CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                         ..+++.|+||.++..| .++||++++        +++++.+...... ..+.++.....+...++.     +..+.+
T Consensus       252 ---~Div~~S~sK~~gg~gd~~~G~l~~~--------~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~  315 (445)
T 1qgn_A          252 ---ADLVLHSATKFLGGHNDVLAGCISGP--------LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQ  315 (445)
T ss_dssp             ---CSEEEECTTTTTTCSSSCCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred             ---CEEEEECCcccccccccceEEEEEEC--------HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHHHH
Confidence               2388999999987655 479999985        3566666554432 223455555554444432     445556


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCC----------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKP----------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG  383 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  383 (421)
                      +..++++.+.+.|+++|++..+..|                ..+.++++.++...    .....++.. ++..++.++.|
T Consensus       316 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~----~~~~~~l~~-l~~~~i~~s~G  390 (445)
T 1qgn_A          316 QQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL----LTTAKFVDA-LKIPYIAPSFG  390 (445)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH----HHHHHHHHH-CSSSEECSCCC
T ss_pred             HHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH----HHHHHHHHh-CCCceEeccCC
Confidence            6677788899999988776213233                13557777776310    012334433 23346777776


Q ss_pred             CCCC----------------------C-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631          384 MAVG----------------------M-KNWLRITFAIEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       384 ~~~~----------------------~-~~~iRi~~~~~~e~l~~~~~~l~~~~~~  416 (421)
                      ..+.                      . ++.+|+|++  .|+++.+++.|++++++
T Consensus       391 ~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--~Edid~li~~L~~al~~  444 (445)
T 1qgn_A          391 GCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--VEDFDDLKADILQALDS  444 (445)
T ss_dssp             SSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--SSCHHHHHHHHHHHHHH
T ss_pred             CCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--cCCHHHHHHHHHHHHhh
Confidence            5431                      1 368999998  45799999999998864

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.95  E-value=2.2e-26  Score=218.36  Aligned_cols=282  Identities=16%  Similarity=0.135  Sum_probs=197.5

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEee
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHF  160 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~  160 (421)
                      .....++++.++++++      .+  +.+++++|++|+..++.++.++||+|+++.|+|+++...    ++..|.+++.+
T Consensus        58 ~~~~~~l~~~la~~~g------~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v  129 (389)
T 3acz_A           58 NPTVEQFEEMVCSIEG------AA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI  129 (389)
T ss_dssp             CHHHHHHHHHHHHHHT------CS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             ChHHHHHHHHHHHHhC------CC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE
Confidence            3445789999999883      22  566777788999999998889999999999999987655    57789998888


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      +.       .|++++++.++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|+.+.. +.   ++. +
T Consensus       130 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~-~~---~~~-~  194 (389)
T 3acz_A          130 DT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCF-LK---PLE-L  194 (389)
T ss_dssp             CT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CC---GGG-T
T ss_pred             CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-cC---ccc-c
Confidence            75       3889999999888999999999999999976   88999999999999999999987543 11   221 2


Q ss_pred             CCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                         +..+++.|+||.++++|.|+ ||+++++       +++++.+..... ...+.++..+.++...++.     +..+.
T Consensus       195 ---~~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~  259 (389)
T 3acz_A          195 ---GADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIRM  259 (389)
T ss_dssp             ---TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             ---CCeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHHH
Confidence               23488999999999999998 9999863       145566655443 2335566666666666653     23334


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCC----------------CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          319 DILRDTADICYDRIKEIPCITCPRK----------------PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      ++..++.+.+.+.|++++.+..+..                ...+.++.+.++        . .+....++.+.|+.+.+
T Consensus       260 ~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------~-~~~~~~~l~~~~i~~~~  330 (389)
T 3acz_A          260 QIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------S-FEAAKKLMEHLKVCTLA  330 (389)
T ss_dssp             HHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------S-HHHHHHHHTTCSSSEEB
T ss_pred             HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------C-HHHHHHHHHhCCCcEEC
Confidence            4445556666666655432211100                112445556664        2 23345667788998877


Q ss_pred             ---C------CCC----------------CC-CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          383 ---G------MAV----------------GM-KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       383 ---g------~~~----------------~~-~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                         |      ..+                +. ++.+|+|++..  +.+++++.|.++++
T Consensus       331 ~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~  387 (389)
T 3acz_A          331 VSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE  387 (389)
T ss_dssp             SCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred             cCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence               3      212                11 47899999843  55666666666654

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.95  E-value=6.5e-26  Score=222.09  Aligned_cols=337  Identities=10%  Similarity=0.036  Sum_probs=229.5

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC-----------
Q 014631           63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR-----------  131 (421)
Q Consensus        63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----------  131 (421)
                      +..+.+++...+.. ....|....+..++++.+++|+.+.+|.+.+++.+++|+|+|+|+..++.++.+           
T Consensus       109 ~~~~~e~l~~~~~~-~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~  187 (511)
T 3vp6_A          109 IGLAGEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM  187 (511)
T ss_dssp             HHHHHHHHHHHHCC-CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCG
T ss_pred             HHHHHHHHHHHhcc-CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCc
Confidence            34455666666654 334777777788999999999999988776678999999999999988876643           


Q ss_pred             ---CCCeEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeCCCCCccccc
Q 014631          132 ---PGANILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVNPGNPCGNVF  199 (421)
Q Consensus       132 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~p~nptG~~~  199 (421)
                         +++.|+++.++|+++...++..|.   +++.++.+  .++.+|+++|++++.++      ++++++++|+|+||.+ 
T Consensus       188 ~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v-  264 (511)
T 3vp6_A          188 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-  264 (511)
T ss_dssp             GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB-
T ss_pred             ccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc-
Confidence               567899999999999999999998   78888875  34679999999988654      7888999999999999 


Q ss_pred             CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631          200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL  278 (421)
Q Consensus       200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  278 (421)
                        +++++|+++|++||+++++|++|+......... ..+....  .-.+++.++||+++.| ..+|+++++++.      
T Consensus       265 --d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~--~aDsv~~~~hK~l~~p-~g~g~l~~~~~~------  333 (511)
T 3vp6_A          265 --DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG------  333 (511)
T ss_dssp             --CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT------
T ss_pred             --ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc--cCCEEEECcccccCCC-cCeEEEEEeCHH------
Confidence              679999999999999999999998865422211 1111111  1125667999997655 668999987643      


Q ss_pred             HHHHHHhhh-cccc------------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          279 RIVDSIKGY-LNIS------------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       279 ~~~~~~~~~-~~~~------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                       +.+..... ..+.                  .+........+..++......+++++.++..++.+++.+.|+++|+++
T Consensus       334 -~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~  412 (511)
T 3vp6_A          334 -ILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFE  412 (511)
T ss_dssp             -HHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEE
T ss_pred             -HHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence             22322110 0000                  000011122233334333457889999999999999999999999998


Q ss_pred             ccC--CCCceeEEEEecCcccccCCC-C----------hHHHHHHHHhhcCeeEEeCCC-CCCCCeEEEEec---CCHHH
Q 014631          340 CPR--KPEGSMFVMVKLNLSLLEGIS-D----------DMEFALQLAKEESVIVLPGMA-VGMKNWLRITFA---IEPSA  402 (421)
Q Consensus       340 ~~~--~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~ll~~~gv~v~~g~~-~~~~~~iRi~~~---~~~e~  402 (421)
                      ++.  .|..+... +.+......+.. +          ..++...| .++|+.+..... .+..+++|++++   ++.++
T Consensus       413 l~~~~~p~~~~v~-f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L-~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~d  490 (511)
T 3vp6_A          413 MVFNGEPEHTNVC-FWYIPQSLRGVPDSPQRREKLHKVAPKIKALM-MESGTTMVGYQPQGDKANFFRMVISNPAATQSD  490 (511)
T ss_dssp             ESSSSCCSSSCEE-EEECCGGGSSCCCCHHHHHHHHHHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEECCCCTTCCHHH
T ss_pred             EEecCCCCeEEEE-EEEeCccccccccchhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEeCCceEEEEEEecCCCCCHHH
Confidence            554  35555433 333221111000 0          12355555 455765543111 112347999984   68899


Q ss_pred             HHHHHHHHHHHHHHh
Q 014631          403 LEEGLGRIKAFCQRH  417 (421)
Q Consensus       403 l~~~~~~l~~~~~~~  417 (421)
                      |+.+++.|+++-+.+
T Consensus       491 i~~ll~~i~~~~~~~  505 (511)
T 3vp6_A          491 IDFLIEEIERLGQDL  505 (511)
T ss_dssp             HHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999998876543

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.95  E-value=3.9e-26  Score=220.28  Aligned_cols=345  Identities=14%  Similarity=0.052  Sum_probs=214.0

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCCC---cEEEc
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP------SVGILPARRAIADYLNSELPCKLSPD---DVYLT  115 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~l~~~ia~~l~~~~~~~~~~~---~i~~~  115 (421)
                      ..+.|..+ ++     +.++.|++++...+.+....+|+.      .....++++...+.+.+.+|  .+.+   ..+++
T Consensus        55 ~~i~lias-~n-----~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~  126 (490)
T 2a7v_A           55 RGLELIAS-EN-----FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQP  126 (490)
T ss_dssp             HSEECCTT-CC-----CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCC
T ss_pred             cCceEECC-CC-----CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeC
Confidence            45666543 22     468999999988876533223332      22245788555566655555  3343   23556


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH--------HHhhcCcee--EeeeccCCCCccCCHHHHHhhhc-cCce
Q 014631          116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEA--------NARHTRLEI--RHFDLLPEKGWEVDLDGLEALAD-ENTV  184 (421)
Q Consensus       116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~~~~~~~~~~~~d~e~l~~~~~-~~~~  184 (421)
                      ++|++|+..++.++++|||+|+++++.|.++..        .+...|..+  +.+++++ ..+.+|+|++++.+. .+++
T Consensus       127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k  205 (490)
T 2a7v_A          127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR  205 (490)
T ss_dssp             SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence            688999999999999999999999998865421        223445443  3444433 346799999999875 3678


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631          185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL  263 (421)
Q Consensus       185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  263 (421)
                      +|+++.++||+  .   .++++|.++|++||+++++|++|.. +...|....++.  ..   .+++.|+||++  .|.+.
T Consensus       206 lIi~~~s~~~~--~---~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a---Div~~S~hK~l--~Gp~G  273 (490)
T 2a7v_A          206 LIIAGTSAYAR--L---IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA---DIVTTTTHKTL--RGARS  273 (490)
T ss_dssp             EEEECCSSCCS--C---CCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC---SEEEEESSGGG--CSCSC
T ss_pred             EEEEcCCCCCC--c---ccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC---CEEEECCcccC--ccccc
Confidence            88888888875  3   2489999999999999999999853 333343333332  11   27788999986  45677


Q ss_pred             EEEEeeCCCcchh-------HHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          264 GWLVTSDPSGILQ-------ELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       264 G~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      |++++++.....+       ..++.+++.....  ..++++.....++..++.......+++..++..++++++.+.|.+
T Consensus       274 G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~  353 (490)
T 2a7v_A          274 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE  353 (490)
T ss_dssp             EEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999975310000       0013344443322  123455555555555555433345578888999999999999998


Q ss_pred             CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------CCHHHH
Q 014631          335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------IEPSAL  403 (421)
Q Consensus       335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------~~~e~l  403 (421)
                      . |+.++..+..++++|+.+....    .+..+ +..+|++.||.+..+..++     .+..+|++..      .+++++
T Consensus       354 ~-G~~v~~~~t~t~lv~vdl~~~g----~~~~~-~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~  427 (490)
T 2a7v_A          354 R-GYSLVSGGTDNHLVLVDLRPKG----LDGAR-AERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDF  427 (490)
T ss_dssp             T-TCEEGGGSCSSSEEEEECTTTT----CCHHH-HHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHH
T ss_pred             c-CcEEecCCCCCeEEEEEeCCCC----CCHHH-HHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHH
Confidence            7 8874433345678888876431    13444 5556688999998764443     2578999763      478999


Q ss_pred             HHHHHHHHHHHHH
Q 014631          404 EEGLGRIKAFCQR  416 (421)
Q Consensus       404 ~~~~~~l~~~~~~  416 (421)
                      +++++.|.++++.
T Consensus       428 ~~~~~~i~~~l~~  440 (490)
T 2a7v_A          428 RRVVDFIDEGVNI  440 (490)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998864

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.95  E-value=1.3e-26  Score=220.04  Aligned_cols=283  Identities=17%  Similarity=0.108  Sum_probs=193.9

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFD  161 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~  161 (421)
                      ....++|+.++++++      .+  +.+++++|++|++.++. ++++||+|+++.|.|++...    .++..|.+++.++
T Consensus        55 ~~~~~lr~~la~~~g------~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~  125 (393)
T 1n8p_A           55 PNRENLERAVAALEN------AQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN  125 (393)
T ss_dssp             HHHHHHHHHHHHHTT------CS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred             hhHHHHHHHHHHHhC------CC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence            446799999999973      22  45556666999999999 88999999999999986544    4566788888887


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc----CcEEEEcccccccccCCCCcccc
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL----GIMVISDEVYDHLTFGSTPYVRM  237 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~De~~~~~~~~~~~~~~~  237 (421)
                      .+       | +++++.+++++++|++++|+||||.+++   +++|.++|+++    |+++|+|++|+.+.+.  .   .
T Consensus       126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~---~  189 (393)
T 1n8p_A          126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--N---P  189 (393)
T ss_dssp             SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C---G
T ss_pred             CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--C---H
Confidence            53       6 8899988888999999999999999986   88999999999    9999999999987642  1   1


Q ss_pred             cccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHH
Q 014631          238 GVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       238 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      ..++   ..+++.|+||.++.+|+|+ ||+++++       +++.+.+..... ...+.++..+.++...++.     +.
T Consensus       190 ~~~~---~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----~~  254 (393)
T 1n8p_A          190 LNFG---ADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LH  254 (393)
T ss_dssp             GGGT---CSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HH
T ss_pred             HHcC---CeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----HH
Confidence            2222   3488999999999999999 9988742       245666655432 2234455555555555542     44


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCC-ccccCCC---------------C--c-eeEEEEecCcccccCCCChHHHHHHHHhhc
Q 014631          316 KIVDILRDTADICYDRIKEIPC-ITCPRKP---------------E--G-SMFVMVKLNLSLLEGISDDMEFALQLAKEE  376 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~~~~g-~~~~~~~---------------~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  376 (421)
                      ...++..++++.+.+.|.+.+. +..+..|               .  . +..+++.++...    .+...++.. ++..
T Consensus       255 ~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----~~~~~~l~~-l~~~  329 (393)
T 1n8p_A          255 LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----EAASKFASS-TRLF  329 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----HHHHHHHHH-CSSS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----HHHHHHHhh-CCcc
Confidence            4555666777777778877644 3211111               1  2 557777776310    012333333 2334


Q ss_pred             CeeEEeCC----------CCC------------C-CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          377 SVIVLPGM----------AVG------------M-KNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       377 gv~v~~g~----------~~~------------~-~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      ++.+..|+          ..+            . ++.+|+|++  +++++++.+.++|+++
T Consensus       330 ~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~  391 (393)
T 1n8p_A          330 TLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             EECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             eECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence            55544442          111            1 368999999  5667777777777654

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.95  E-value=1.2e-26  Score=220.79  Aligned_cols=211  Identities=16%  Similarity=0.119  Sum_probs=156.4

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEee
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHF  160 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~  160 (421)
                      ..+..++|+.++++++      . .+.|++++| ++|+..++. ++++||+|++++|+|++....    ++..|.+++.+
T Consensus        66 ~p~~~~l~~~la~~~g------~-~~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v  136 (403)
T 3cog_A           66 NPTRNCLEKAVAALDG------A-KYCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFV  136 (403)
T ss_dssp             CHHHHHHHHHHHHHHT------C-SEEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred             CchHHHHHHHHHHHhC------C-CcEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEE
Confidence            3456899999999984      2 255666655 689999998 889999999999999875443    45679998888


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC-cEEEEcccccccccCCCCcccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG-IMVISDEVYDHLTFGSTPYVRMGV  239 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~~~~~~  239 (421)
                      +.+       |++++++.+++++++|++++|+||||.+++   +++|+++|+++| +++|+|++|+.+.+.    .++. 
T Consensus       137 ~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~----~~~~-  201 (403)
T 3cog_A          137 DCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ----RPLA-  201 (403)
T ss_dssp             CTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC----CTTT-
T ss_pred             CCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC----Cccc-
Confidence            753       789999999889999999999999999986   889999999999 999999999986532    1221 


Q ss_pred             cCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          240 FGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       240 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      +   +..+++.|+||.++++| .|+||+++++       +++.+.+..... ...+.+++.+.++...++.     +..+
T Consensus       202 ~---~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r  266 (403)
T 3cog_A          202 L---GADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT-----LHVR  266 (403)
T ss_dssp             T---TCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred             c---CCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHH
Confidence            2   34588999999988766 4799999853       356666665443 2345677787777777753     2233


Q ss_pred             HHHHHHHHHHHHHHhhc
Q 014631          318 VDILRDTADICYDRIKE  334 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~  334 (421)
                      .++..++...+.+.+++
T Consensus       267 ~~~~~~n~~~l~~~l~~  283 (403)
T 3cog_A          267 MEKHFKNGMAVAQFLES  283 (403)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            34444444445555443

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.95  E-value=4.1e-26  Score=215.22  Aligned_cols=314  Identities=13%  Similarity=0.113  Sum_probs=214.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH-HHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEE
Q 014631           60 FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI-ADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANIL  137 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i-a~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl  137 (421)
                      ++.++.+.+++.+.++.+....|++  ...++|+++ +++++       ..+++++++|+++++.+++.++ +++||+|+
T Consensus        12 ~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi   82 (377)
T 3ju7_A           12 TVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKYAL   82 (377)
T ss_dssp             CCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEE
T ss_pred             CCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEE
Confidence            6888999999999988754322333  368999999 99873       2567899999999999999998 89999999


Q ss_pred             EcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccC--ceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          138 LPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DEN--TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       138 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~--~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      ++.++|.++...+...|++++.+++++ +++.+|++++++++ +++  +++|+   |+||+|...+   +++|.++|+ |
T Consensus        83 ~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~-~  154 (377)
T 3ju7_A           83 MPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK-K  154 (377)
T ss_dssp             EESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH-T
T ss_pred             ECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh-c
Confidence            999999999999999999999998864 45789999999987 556  77665   7789999855   778888899 9


Q ss_pred             CcEEEEcccccccccCCCCcccc-cccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRM-GVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-  290 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-  290 (421)
                      |+++|+|++|+.......  ..+ ..+.  +  +.+.||  +|.++. | +.|++++++       +++.+++...... 
T Consensus       155 ~~~vi~D~a~a~g~~~~~--~~~g~~~~--d--~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~~g  219 (377)
T 3ju7_A          155 GVPVVVDAAPGFGLMNGG--MHYGQDFS--G--MIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGNFG  219 (377)
T ss_dssp             TCCBEEECTTCTTCEETT--EETTTTCS--S--EEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTBTT
T ss_pred             CCEEEEECCCccCCeECC--EeccCCCC--c--EEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHhcC
Confidence            999999999986432110  011 0111  1  445555  588764 4 578888754       3455655544321 


Q ss_pred             ------------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce-----eEEEEe
Q 014631          291 ------------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS-----MFVMVK  353 (421)
Q Consensus       291 ------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~-----~~~~~~  353 (421)
                                  ....+.+..+.+...++     .++...++.+++++.+.+.|++++++.....+..+     .|+.+.
T Consensus       220 ~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (377)
T 3ju7_A          220 FDTNRECTMMGFNCKMSEYAAAIGIATMK-----KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPIL  294 (377)
T ss_dssp             BCTTSCBCSSCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEE
T ss_pred             CCCCCceeeccccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEE
Confidence                        12234444333333343     35666777778888888888887654211122221     133344


Q ss_pred             cCcccccCCCChHHHHHHHHhhcCeeEEeCCC--CCC-------------------CCeEEEEec--CCHHHHHHHHHHH
Q 014631          354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMA--VGM-------------------KNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--~~~-------------------~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      ++..     .+..++.. .|+++||.+..+..  ++.                   ...+|+.++  .+++|++++++.|
T Consensus       295 ~~~~-----~~~~~l~~-~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l  368 (377)
T 3ju7_A          295 CPEE-----VRNKQVIE-DLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICL  368 (377)
T ss_dssp             CCTT-----SCHHHHHH-HHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred             eCCh-----hhHHHHHH-HHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHH
Confidence            4421     12344554 45778999987752  110                   246899887  7899999999999


Q ss_pred             HHHHHH
Q 014631          411 KAFCQR  416 (421)
Q Consensus       411 ~~~~~~  416 (421)
                      ++++..
T Consensus       369 ~~~~~~  374 (377)
T 3ju7_A          369 GQKVVS  374 (377)
T ss_dssp             TC----
T ss_pred             HHHHhc
Confidence            888764

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.95  E-value=8.6e-26  Score=215.67  Aligned_cols=291  Identities=15%  Similarity=0.107  Sum_probs=197.1

Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEee
Q 014631           85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHF  160 (421)
Q Consensus        85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~  160 (421)
                      .....+|++.++++++        .+..+++++|++|+..++.+++++||+|++++|.|.++..    .+...|.+++.+
T Consensus        81 ~p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v  152 (430)
T 3ri6_A           81 NPTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV  152 (430)
T ss_dssp             CHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred             CHHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence            3446789999999873        2346666677899999999999999999999999998876    667889998888


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      +.+       |++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|+...+    ..+. ..
T Consensus       153 ~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~----~~~~-~~  217 (430)
T 3ri6_A          153 DVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL----LEAK-RL  217 (430)
T ss_dssp             CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT----CCGG-GG
T ss_pred             CCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChH-Hc
Confidence            753       889999999989999999999999999975   77899999999999999999986432    1111 22


Q ss_pred             CCCCCEEEEcccccccCCCCceEEEEEe-eCCCcch---hHHH---------HHHHHhhh--cccccCCchHHHHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRLGWLVT-SDPSGIL---QELR---------IVDSIKGY--LNISSGPATFVQGAVPQI  305 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~---~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~  305 (421)
                      +.   .+++.|+||.++.+|..+|.+++ +....+.   ..++         ++......  .......++.....+...
T Consensus       218 g~---div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~  294 (430)
T 3ri6_A          218 GV---DIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLG  294 (430)
T ss_dssp             TC---SEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHH
T ss_pred             CC---EEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhh
Confidence            22   38899999999877665555555 2222110   0011         12222211  112223444443333332


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHH
Q 014631          306 FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFA  369 (421)
Q Consensus       306 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~  369 (421)
                      +     +.+..+.++..+++..+.+.|++.|++..+..|.                +|+.+|++++...     ....++
T Consensus       295 l-----~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~-----~~~~~~  364 (430)
T 3ri6_A          295 L-----ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKE-----ASYRFM  364 (430)
T ss_dssp             H-----HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHH-----HHHHHH
T ss_pred             h-----hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHH-----HHHHHH
Confidence            3     3355666777889999999999888876444554                4548888887321     234454


Q ss_pred             HHHHhhcCeeEEeCCCCC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          370 LQLAKEESVIVLPGMAVG-----------------------MKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       370 ~~ll~~~gv~v~~g~~~~-----------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      ..+ +..++.+.+|..+.                       .++.||+|++.  |+.+.+++.|++++
T Consensus       365 ~~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al  429 (430)
T 3ri6_A          365 DAL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL  429 (430)
T ss_dssp             HHC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred             HhC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence            443 55566666776543                       14689999984  34445555555554

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.95  E-value=1.3e-25  Score=218.74  Aligned_cols=332  Identities=11%  Similarity=0.055  Sum_probs=231.2

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC--------CcEEEcCCHHHHHHHHHHHhcC---
Q 014631           63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP--------DDVYLTAGCKQAIQVILTVLAR---  131 (421)
Q Consensus        63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~--------~~i~~~~g~~~al~~~~~~l~~---  131 (421)
                      +..+.+.+...++. +...|....+..++++.+++|+.+.+|.+...        ...++|+|||+++..++.+..+   
T Consensus        92 ~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~  170 (481)
T 4e1o_A           92 PSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI  170 (481)
T ss_dssp             HHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence            45556666666654 34578777788999999999999988865322        3678999999998887765532   


Q ss_pred             ----------------CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEe
Q 014631          132 ----------------PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIV  189 (421)
Q Consensus       132 ----------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~  189 (421)
                                      +++.|+++.++|.++...+...|.+++.++++  .++.+|+++|+++++++      +.+++++
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~  248 (481)
T 4e1o_A          171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCAT  248 (481)
T ss_dssp             HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEe
Confidence                            56799999999999999999999999999874  45679999999988653      5667888


Q ss_pred             CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      .++|+||.+   +++++|+++|++||+++++|++|+.+.+....... +..+..  -..+..++||+++.| ..+|++++
T Consensus       249 ~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~--aDsi~~~~hK~l~~p-~g~g~l~~  322 (481)
T 4e1o_A          249 LGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY--ADSFTFNPSKWMMVH-FDCTGFWV  322 (481)
T ss_dssp             BSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEE
T ss_pred             cCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc--CCEEEEChHHhcCCC-CceEEEEE
Confidence            999999998   67999999999999999999999875432221111 111111  124566899997655 45788888


Q ss_pred             eCCCcchhHHHHHH-HHhhhccc-c----------------cC--CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631          269 SDPSGILQELRIVD-SIKGYLNI-S----------------SG--PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC  328 (421)
Q Consensus       269 ~~~~~~~~~~~~~~-~~~~~~~~-~----------------~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  328 (421)
                      +++       .... .+.....+ .                .+  ...+.+.++...+   ...+++++.++..++++++
T Consensus       323 ~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~---g~~g~~~~~~~~~~~a~~l  392 (481)
T 4e1o_A          323 KDK-------YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSF---GVKNLQAHVRHGTEMAKYF  392 (481)
T ss_dssp             SBH-------HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred             eCH-------HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHH
Confidence            652       2221 11100000 0                00  1123333333333   3467888899999999999


Q ss_pred             HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHH
Q 014631          329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEE  405 (421)
Q Consensus       329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~  405 (421)
                      .+.|+++|++.++ .+....++++.++...    ....++..++.++..+.+.|+.. ....++|++++   ++++++++
T Consensus       393 ~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~  466 (481)
T 4e1o_A          393 ESLVRNDPSFEIP-AKRHLGLVVFRLKGPN----SLTENVLKEIAKAGRLFLIPATI-QDKLIIRFTVTSQFTTRDDILR  466 (481)
T ss_dssp             HHHHHTCTTEECC-SCCCSSEEEEEESSCH----HHHHHHHHHHHHHCSSBCEEEEE-TTEEEEEEECCCTTCCHHHHHH
T ss_pred             HHHHhcCCCeEEe-cCCceeEEEEEeCCch----HHHHHHHHHHHhCCeEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHH
Confidence            9999999999954 4445566777775311    02456666665543355555432 23468999976   47899999


Q ss_pred             HHHHHHHHHHHhhh
Q 014631          406 GLGRIKAFCQRHAK  419 (421)
Q Consensus       406 ~~~~l~~~~~~~~~  419 (421)
                      ++++|+++.+++.+
T Consensus       467 ~~~~i~~~~~~l~~  480 (481)
T 4e1o_A          467 DWNLIRDAATLILS  480 (481)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999887654

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.94  E-value=4e-26  Score=221.66  Aligned_cols=341  Identities=11%  Similarity=0.028  Sum_probs=222.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .|..++||..|......+ ..+|.+.+++.+++...   ....|+. ....++++.+++.+.+..+  ...+++++++||
T Consensus        61 dG~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sG  136 (472)
T 1ohv_A           61 DGNRMLDLYSQISSIPIG-YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACG  136 (472)
T ss_dssp             TSCEEEESSHHHHTCSSC-BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSH
T ss_pred             CCCEEEECCCCHhhcccC-CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCc
Confidence            477899998887553322 46899999999876421   1123433 3357899999997776554  356799999999


Q ss_pred             HHHHHHHHHHhc--------C-----------------CC---CeEEEcCCCCcchHHHHh-hcCcee-----------E
Q 014631          119 KQAIQVILTVLA--------R-----------------PG---ANILLPKPGFPLYEANAR-HTRLEI-----------R  158 (421)
Q Consensus       119 ~~al~~~~~~l~--------~-----------------~g---d~Vl~~~p~y~~~~~~~~-~~g~~~-----------~  158 (421)
                      ++|+..+++.+.        .                 ||   ++|++.+++|+++...+. ..|.+.           .
T Consensus       137 seA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~  216 (472)
T 1ohv_A          137 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP  216 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCC
T ss_pred             hhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCc
Confidence            999999998773        1                 46   899999999998765553 223211           1


Q ss_pred             eeeccCC-----CC--c-----cCCHHHHHhhhcc------CceEEEEeCCCCCcccc-cCHHHHHHHHHHHHhcCcEEE
Q 014631          159 HFDLLPE-----KG--W-----EVDLDGLEALADE------NTVAMVIVNPGNPCGNV-FTYQQLQKIAEKARKLGIMVI  219 (421)
Q Consensus       159 ~~~~~~~-----~~--~-----~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li  219 (421)
                      .++.+..     ..  +     ..|+++|++.+++      ++++|++...+|++|.+ .+++.+++|.++|++||+++|
T Consensus       217 ~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli  296 (472)
T 1ohv_A          217 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL  296 (472)
T ss_dssp             EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             ccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence            1122100     00  0     1267888888865      56666555557889975 678999999999999999999


Q ss_pred             EcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHH
Q 014631          220 SDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFV  298 (421)
Q Consensus       220 ~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  298 (421)
                      +||+|+++.+.|.. ..+..++.. ....+.||||.+ ++|   ||++ +.        ++. .+.... ..+.+.++++
T Consensus       297 ~DEv~~g~g~~g~~-~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~~~  360 (472)
T 1ohv_A          297 VDEVQTGGGSTGKF-WAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDPSK  360 (472)
T ss_dssp             EECTTTTTTTTSSS-SGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCHHH
T ss_pred             EeCcccCCCCCCCc-hhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccHHH
Confidence            99999987665542 233333311 001134899995 444   7765 31        121 111222 2334678889


Q ss_pred             HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC----CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHH
Q 014631          299 QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI----PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLA  373 (421)
Q Consensus       299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  373 (421)
                      +.++.++|+...+   ++..++++++++++.+.|+++    |+ +..+ .+. |.++++.++...     ....++..++
T Consensus       361 ~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~~-g~~~~~~~~~~~-----~~~~~~~~l~  430 (472)
T 1ohv_A          361 NLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRV-RGR-GTFCSFDTPDES-----IRNKLISIAR  430 (472)
T ss_dssp             HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EEE-TTEEEEECSSHH-----HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cCC-ceEEEEEeCChh-----HHHHHHHHHH
Confidence            9888888864222   234566667777777766643    43 3312 333 556666765311     2456666665


Q ss_pred             hhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          374 KEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       374 ~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                       ++||.+.|+.    .+++|++++  ++++++++++++|.++++++
T Consensus       431 -~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~  471 (472)
T 1ohv_A          431 -NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADF  471 (472)
T ss_dssp             -HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             -HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence             5799999863    478999876  78999999999999998754

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.94  E-value=3.4e-26  Score=221.47  Aligned_cols=299  Identities=11%  Similarity=0.083  Sum_probs=202.2

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH-HHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCK-QAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLP  164 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~-~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~  164 (421)
                      ..++++.+.+++.+.+|.  +++ +++|+|+| .++..++.++..  +|+.|++++++|+++...++..|++++.++..+
T Consensus       131 ~~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~  207 (456)
T 2z67_A          131 MYALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL  207 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence            356666677777776664  344 99999999 455545555433  678899999999999999999999999888643


Q ss_pred             -CCCccCCHHHHHhhh-c----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631          165 -EKGWEVDLDGLEALA-D----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG  238 (421)
Q Consensus       165 -~~~~~~d~e~l~~~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  238 (421)
                       ++++.+|++++++.+ +    .++.++++++|+||||.+   .++++|.++|+++|+++++|++|+.+..+ .......
T Consensus       208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g-~~~~~~~  283 (456)
T 2z67_A          208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNY-YLEKLKK  283 (456)
T ss_dssp             ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHH-HHHHHHH
T ss_pred             cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHH-hhHHHHH
Confidence             345789999999988 4    356667789999999999   55888999999999999999999875431 1011111


Q ss_pred             ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccC-CchHHHHHHHHHhhccchhHHHHH
Q 014631          239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSG-PATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      .+... ..+++.|+||++ .++.++|++++++       +++.+.+......... .+.+.+.++...+   ...+++++
T Consensus       284 ~~~~~-~D~~~~s~hK~~-~~p~g~G~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~~~aal~~l---~~~~~~~~  351 (456)
T 2z67_A          284 AFKYR-VDAVVSSSDKNL-LTPIGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVSLLSM---GSKNYLEL  351 (456)
T ss_dssp             HHTSC-CSEEEEEHHHHH-CCCSSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHHHHHH---HHHHHHHH
T ss_pred             hhCCC-CCEEEEcCCCCc-CCCCCeEEEEEcC-------HHHHhhcCcCCCCCCCCCHHHHHHHHHHHH---HHHHHHHH
Confidence            12111 125678999984 4558899999953       3455655433222111 1223333333333   34677888


Q ss_pred             HHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCe---eEE------eCCC
Q 014631          318 VDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESV---IVL------PGMA  385 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv---~v~------~g~~  385 (421)
                      .++..++++++.+.|++++   |+. +..|.  .++++.+...   +  ...++...| .++|+   -+.      +|..
T Consensus       352 ~~~~~~~~~~l~~~L~~~~~~~g~~-v~~~~--~~v~~~~~~~---~--~~~~l~~~L-~~~gi~~~rv~~~~g~f~G~~  422 (456)
T 2z67_A          352 VKNQKNSKKLLDELLNDLSKKTGGK-FLDVE--SPIASCISVN---S--DPVEIAAKL-YNLRVTGPRGIKKTDHFGNCY  422 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCC-BCCCC--CSSEEEEECS---S--CHHHHHHHH-HHTTEESCEEECTTCHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCE-ecCCC--CeEEEEEecc---c--HHHHHHHHH-HHcCCCcceEEeecCcccccc
Confidence            9999999999999999875   766 43555  4555555211   0  134566655 45565   343      1333


Q ss_pred             CC--CCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          386 VG--MKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       386 ~~--~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      |.  ..+++|++++  ++++++++++++|++++
T Consensus       423 ~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          423 LGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             SSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred             ccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence            32  2478999998  79999999999998754

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.94  E-value=2.2e-24  Score=212.00  Aligned_cols=340  Identities=11%  Similarity=0.036  Sum_probs=218.3

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-------C-CC
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-------R-PG  133 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-------~-~g  133 (421)
                      .+..+...+.....+.....|...++..++++.+.+++.+.+|.+  ++++++|+|+|+|+..++.++.       + +|
T Consensus       120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G  197 (515)
T 2jis_A          120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRG  197 (515)
T ss_dssp             CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC
T ss_pred             CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC
Confidence            344444333223323333356555566677887777777776643  7899999999999988887763       2 57


Q ss_pred             C------eEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccc
Q 014631          134 A------NILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNV  198 (421)
Q Consensus       134 d------~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~  198 (421)
                      |      .|+++.++|+++...+...|.   +++.+|.+  .++.+|+++|++.+++      ++++|++++|+|+||.+
T Consensus       198 ~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i  275 (515)
T 2jis_A          198 LRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAF  275 (515)
T ss_dssp             GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB
T ss_pred             ccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCc
Confidence            5      899999999999999998888   78888864  3567999999998865      47888999999999999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE  277 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  277 (421)
                      .   ++++|+++|+++|+++|+|++|+.+.+....+. .+..+.  ...+++.|+||+++.| .++|+++++++......
T Consensus       276 ~---~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~  349 (515)
T 2jis_A          276 D---PLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKR  349 (515)
T ss_dssp             C---CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHH
T ss_pred             c---CHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChHHHHHH
Confidence            4   488999999999999999999998765432221 122221  1227778999997644 57999999764111100


Q ss_pred             H-H-HHHHHhhh-c------cc-c------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631          278 L-R-IVDSIKGY-L------NI-S------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP  341 (421)
Q Consensus       278 ~-~-~~~~~~~~-~------~~-~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  341 (421)
                      . . ....+... .      .. .      .....+.+.++..++.   ..++++..++..++++++.+.|+++|++.++
T Consensus       350 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~  426 (515)
T 2jis_A          350 CHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKREGFELV  426 (515)
T ss_dssp             HHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred             HhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence            0 0 00011000 0      00 0      0011233334333442   4668888899999999999999999898855


Q ss_pred             CCCCceeEEEEecCcccccC---CCCh-H-------HHHHHHHhhcCeeEEeCCC-CCCCCeEEEEe-c--CCHHHHHHH
Q 014631          342 RKPEGSMFVMVKLNLSLLEG---ISDD-M-------EFALQLAKEESVIVLPGMA-VGMKNWLRITF-A--IEPSALEEG  406 (421)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~---~~~~-~-------~~~~~ll~~~gv~v~~g~~-~~~~~~iRi~~-~--~~~e~l~~~  406 (421)
                      ..|..+.+.+...+.. ..+   ..+- .       .+... +.+.|+.+..... .+..+++|+++ +  +++++++++
T Consensus       427 ~~~~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~-l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~  504 (515)
T 2jis_A          427 MEPEFVNVCFWFVPPS-LRGKQESPDYHERLSKVAPVLKER-MVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFL  504 (515)
T ss_dssp             SCCSSSEEEEEECCGG-GTTCTTSTTHHHHHHTHHHHHHHH-HHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHH
T ss_pred             CCCCeeEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHH-HHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHH
Confidence            4454444443222321 000   0010 1       13333 4456865532111 12246899999 4  789999999


Q ss_pred             HHHHHHHHHH
Q 014631          407 LGRIKAFCQR  416 (421)
Q Consensus       407 ~~~l~~~~~~  416 (421)
                      ++.|++++++
T Consensus       505 ~~~l~~~~~~  514 (515)
T 2jis_A          505 LNELERLGQD  514 (515)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHhh
Confidence            9999988654

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.94  E-value=2.3e-25  Score=212.05  Aligned_cols=284  Identities=11%  Similarity=0.082  Sum_probs=188.6

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~  162 (421)
                      ...++|+.+|++++      .  +++++++||++|++.++.+++++||+|+++.+.|.+....+    +..|+++..++.
T Consensus        83 ~~~~le~~lA~l~g------~--~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~  154 (415)
T 2fq6_A           83 THFSLQQAMCELEG------G--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP  154 (415)
T ss_dssp             HHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred             hHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence            35689999999873      2  35677788999999999999999999999999999876543    457888888764


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCccccccc
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      +       |++++++++++++++|++.+|+||||.+++   +++|+++|++  +|+++|+|++|+.... .   .++ .+
T Consensus       155 ~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~---~p~-~~  219 (415)
T 2fq6_A          155 L-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-F---KAL-DF  219 (415)
T ss_dssp             T-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-S---CGG-GG
T ss_pred             C-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-C---Ccc-cc
Confidence            2       789999999989999999999999999975   7899999999  9999999999986431 1   122 22


Q ss_pred             CCCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      +.   .+++.|+||.++.+|.+ +||+++++.        +++.+..... .....++.....+...++     .+..+.
T Consensus       220 g~---Div~~S~sK~lg~~g~~~~G~l~~~~~--------~~~~l~~~~~~~G~~~~~~~a~~~~~~l~-----~l~~r~  283 (415)
T 2fq6_A          220 GI---DVSIQAATKYLVGHSDAMIGTAVCNAR--------CWEQLRENAYLMGQMVDADTAYITSRGLR-----TLGVRL  283 (415)
T ss_dssp             TC---SEEEEETTTTTTCSSSCCCEEEEECTT--------THHHHHHHHHHTTCCCCHHHHHHHHHHHH-----HHHHHH
T ss_pred             CC---eEEEEeCccccCCCCCceEEEEEeCHH--------HHHHHHHHHHhcCCCCCHHHHHHHHhhhh-----HHHHHH
Confidence            22   38899999999888765 588887532        2333433322 122334444443333332     345556


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCC----------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKP----------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      ++..++...+.+.|++.|.+..+..|                ..+..+++.++...  +..+...++.. ++..++.+..
T Consensus       284 ~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~--~~~~~~~~l~~-l~~~~~a~s~  360 (415)
T 2fq6_A          284 RQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKL--NNEELANYLDN-FSLFSMAYSW  360 (415)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCC--CHHHHHHHHTT-CSSCEECSCC
T ss_pred             HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCC--CHHHHHHHHHh-CCcCeEeccC
Confidence            66677788888888876544311111                13456777776310  00012233322 2333444444


Q ss_pred             CCC--------------------CCC-CCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          383 GMA--------------------VGM-KNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       383 g~~--------------------~~~-~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      |+.                    .+. ++.+|+|++  +++|+++.+.++|++
T Consensus       361 G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~  413 (415)
T 2fq6_A          361 GGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR  413 (415)
T ss_dssp             CSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             CCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence            421                    122 468999999  556666666666653

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.94  E-value=2e-25  Score=216.73  Aligned_cols=343  Identities=12%  Similarity=0.037  Sum_probs=230.1

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-------CcEEEcCCHHHHHHHHHHHhcC----
Q 014631           63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-------DDVYLTAGCKQAIQVILTVLAR----  131 (421)
Q Consensus        63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-------~~i~~~~g~~~al~~~~~~l~~----  131 (421)
                      +..+.+.+...++. +...|....+..++++.+++|+.+.+|.+...       ...++|+|||+++..++.+..+    
T Consensus        87 ~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~  165 (475)
T 3k40_A           87 PAIVADMLSGAIAC-IGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLK  165 (475)
T ss_dssp             HHHHHHHHHHHHCC-CSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCc-cccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHH
Confidence            34555556666554 34467777778899999999999988865321       3688999999998877765421    


Q ss_pred             ---------------CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeC
Q 014631          132 ---------------PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVN  190 (421)
Q Consensus       132 ---------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~  190 (421)
                                     +++.|+++.++|+++...+...|++++.++++  .++ +|+++|++.+.++      +.+++++.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~  242 (475)
T 3k40_A          166 EVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTL  242 (475)
T ss_dssp             HHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred             HhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEe
Confidence                           34689999999999999999999999999875  346 9999999988654      55678889


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      ++|+||.+   +++++|+++|++||+++++|++|+...+...... .+..+..  -..+..++||+++.| ..+|+++++
T Consensus       243 ~~t~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~--~Ds~~~~~hK~l~~p-~g~g~l~~~  316 (475)
T 3k40_A          243 GTTNSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIES--ADSFNFNPHKWMLVN-FDCSAMWLK  316 (475)
T ss_dssp             SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEES
T ss_pred             cCCCCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCccc--CCEEEECchhccCCC-CceEEEEEe
Confidence            99999998   6799999999999999999999987543221111 1111111  125567899986543 558999887


Q ss_pred             CCCcchhHHHH-HHHHhhh--------cccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          270 DPSGILQELRI-VDSIKGY--------LNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       270 ~~~~~~~~~~~-~~~~~~~--------~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      ++....+.-.. ...+...        .... .+.-......+..++......+++++.++..++++++.+.|+++|++.
T Consensus       317 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~  396 (475)
T 3k40_A          317 DPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFE  396 (475)
T ss_dssp             SGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred             CHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence            64321100000 0000000        0000 011011122223333332356788889999999999999999999998


Q ss_pred             ccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631          340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~  416 (421)
                      ++ .+.....+++.++...    ....++..++.++.++.+.|+...+ ..++|++++   +++++|++++++|+++.++
T Consensus       397 l~-~~~~~~iv~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~  470 (475)
T 3k40_A          397 LA-AEINMGLVCFRLKGSN----ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDMEYSWKEVSAAADE  470 (475)
T ss_dssp             ES-SCCBTTEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             Ee-cCCceEEEEEEeCCch----HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            54 4444556666664311    0245677776655445555554333 568999986   4789999999999999988


Q ss_pred             hhhcC
Q 014631          417 HAKQQ  421 (421)
Q Consensus       417 ~~~~~  421 (421)
                      +.+.+
T Consensus       471 ~~~~~  475 (475)
T 3k40_A          471 MEQEQ  475 (475)
T ss_dssp             HHTCC
T ss_pred             HhccC
Confidence            76643

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.94  E-value=3.2e-26  Score=220.75  Aligned_cols=291  Identities=10%  Similarity=0.059  Sum_probs=192.7

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL  163 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  163 (421)
                      +...+.++++.+++ ++      .+ +++++|+|+++++..++.+++++||+|+++.++|.++...+...|+++++++..
T Consensus        55 ~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~  126 (446)
T 2x3l_A           55 PEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETH  126 (446)
T ss_dssp             CSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEE
T ss_pred             cchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCe
Confidence            44445677777776 53      33 689999999999999999999999999999999999999999999999998873


Q ss_pred             CCCC----ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCccccc
Q 014631          164 PEKG----WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMG  238 (421)
Q Consensus       164 ~~~~----~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~  238 (421)
                      .+++    +.+|++++   +.++++++++++ .|++|.+++   +++|+++|++||+++|+||+|+. +.|.+. .....
T Consensus       127 ~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~  198 (446)
T 2x3l_A          127 QSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTL  198 (446)
T ss_dssp             ECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGG
T ss_pred             eccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChH
Confidence            2333    56788887   456788999999 455999976   78999999999999999999987 334443 22332


Q ss_pred             ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      ..+.+   +++.|+||++ .++.++||+++++..  .+...+......  ...++++.....++..+++.......++..
T Consensus       199 ~~g~D---i~~~S~~K~l-~~~~g~g~l~~~~~~--i~~~~~~~~~~~--~~~~s~~~~~~aal~~a~~~l~~~g~~~~~  270 (446)
T 2x3l_A          199 NYQAD---YVVQSFHKTL-PALTMGSVLYIHKNA--PYRENIIEYLSY--FQTSSPSYLIMASLESAAQFYKTYDSTLFF  270 (446)
T ss_dssp             GGTCS---EEEECHHHHS-SSCTTCEEEEEETTC--TTHHHHHHHHHH--HSCSSCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred             HcCCC---EEEECCcccc-ccccccEEEEEcCCc--CCHHHHHHHHHH--HcCCCchHHHHHHHHHHHHHHHHhCHHHHH
Confidence            33332   8889999963 333458999997532  111112111111  122355555544444444321111122245


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE-eCCCCCCCCeEEEEec
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL-PGMAVGMKNWLRITFA  397 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~iRi~~~  397 (421)
                      ++.+++.+++++.     ++.+. .+.++.++|+.++.      .+..++...| .++||.+. +|.     +++|++++
T Consensus       271 ~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~~------~~~~~l~~~L-~~~GI~v~~~g~-----~~iRi~~~  332 (446)
T 2x3l_A          271 AKRAQLIECLENK-----GFEML-QVDDPLKLLIKYEG------FTGHDIQNWF-MNAHIYLELADD-----YQALAILP  332 (446)
T ss_dssp             HHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECTT------SCHHHHHHHH-HHTTEEESEECS-----SCEEEECC
T ss_pred             HHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeCC------cCHHHHHHHH-HHCCCEEEecCC-----CEEEEEee
Confidence            5555666666655     55523 34444578887751      1456666665 45599997 543     68999998


Q ss_pred             --CCHHHHHHHHHHHHHHHHHh
Q 014631          398 --IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       398 --~~~e~l~~~~~~l~~~~~~~  417 (421)
                        ++++++ +++++|+++++++
T Consensus       333 ~~~t~e~i-~l~~aL~~~~~~~  353 (446)
T 2x3l_A          333 LWHHDDTY-LFDSLLRKIEDMI  353 (446)
T ss_dssp             CCCTTCCC-CHHHHHHHHHTCC
T ss_pred             cCCCHHHH-HHHHHHHHHHHhh
Confidence              588999 9999999987655

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.89  E-value=1.7e-28  Score=235.39  Aligned_cols=336  Identities=13%  Similarity=0.064  Sum_probs=223.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|.++|||..|......+ ..+|.+.+++.+++.+.....| +.....+|.+.+++++      + ..+.+++++||++|
T Consensus        98 dG~~yiD~~~~~~~~~lG-h~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~------p-~~~~v~~~nSGseA  168 (465)
T 2yky_A           98 DGHAYVNFLGEYTAGLFG-HSHPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRF------P-SIDLVRFTNSGTEA  168 (465)
Confidence            488999998887432222 4678999999999887433334 3344567777777776      2 35789999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCCcchHHHHh----hcCc--eeEeeeccCCCCccCCHHHHHhhhc---cCceEEEEeC
Q 014631          122 IQVILTVLA--RPGANILLPKPGFPLYEANAR----HTRL--EIRHFDLLPEKGWEVDLDGLEALAD---ENTVAMVIVN  190 (421)
Q Consensus       122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~e~l~~~~~---~~~~~i~~~~  190 (421)
                      +..+++...  ..+++|++.+++|+++...+.    ..|.  .+..++.       -|++++++.++   +++++|++..
T Consensus       169 ~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~ep  241 (465)
T 2yky_A          169 NLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVEP  241 (465)
Confidence            999998753  244899999999998755443    1222  1222221       27888888886   4566665443


Q ss_pred             CCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      .++++|.+. +++.+++|.++|++||+++|+||+|+ +. .|.. .....++.   ...+.||||.++. |+|+||++++
T Consensus       242 v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r-~g~~-~a~~~~gv---~pDi~t~sK~lg~-G~piG~v~~~  314 (465)
T 2yky_A          242 MLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SR-LSGG-GAQEMLGI---SADLTTLGKYIGG-GMSFGAFGGR  314 (465)
Confidence            366699654 67889999999999999999999999 63 3321 12222221   1234589999875 8999999986


Q ss_pred             CCCcchhHHHHHHHHhh------hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC---Cccc
Q 014631          270 DPSGILQELRIVDSIKG------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP---CITC  340 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~  340 (421)
                      .        ++++.+..      ....+.+.|+++++++.++|+...+   +...++++++.+++.+.|+++.   ++. 
T Consensus       315 ~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~-  382 (465)
T 2yky_A          315 R--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQAP-  382 (465)
Confidence            3        56666655      1223457888999998888875322   2345556666666666665431   221 


Q ss_pred             cCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631          341 PRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                      ...+..|.++|+.+......        +......++..+ .++||++.|+. +..     +++..+++++++++++|.+
T Consensus       383 ~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~l-l~~GV~v~p~~-~~~-----~s~~~t~edid~~l~~l~~  455 (465)
T 2yky_A          383 LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHM-LRKGIYLAPRG-MYA-----LSLEIADAGRDAFAEALAD  455 (465)
Confidence            11345577888877531100        000134566555 46799999875 221     6667899999999999999


Q ss_pred             HHHHhhh
Q 014631          413 FCQRHAK  419 (421)
Q Consensus       413 ~~~~~~~  419 (421)
                      +++++++
T Consensus       456 ~l~~~~~  462 (465)
T 2yky_A          456 FIGEQRA  462 (465)
Confidence            9987654

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.93  E-value=1.2e-23  Score=199.87  Aligned_cols=307  Identities=14%  Similarity=0.112  Sum_probs=208.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-------cCCC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-------ARPG  133 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-------~~~g  133 (421)
                      ..++.+.+++.+.+...   .|.+..+..++|+.++++++      .  ++++++++|++++..++.++       .++|
T Consensus        12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g   80 (390)
T 3b8x_A           12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG------S--KYAVMVSSGSTANLLMIAALFFTKKPRLKKG   80 (390)
T ss_dssp             CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred             CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC------C--CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence            46788899999988762   35566678899999999984      2  26777888889999999998       7899


Q ss_pred             CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631          134 ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK  213 (421)
Q Consensus       134 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~  213 (421)
                      |+|+++.++|+++...+...|++++.++++++ ++.+|++++++.++++++++++++   ++|..   .++++|.++|++
T Consensus        81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~  153 (390)
T 3b8x_A           81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP---NNFDEINKIIGG  153 (390)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHTT
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh---hhHHHHHHHHHH
Confidence            99999999999999999999999999988653 467999999999988888888874   55665   569999999999


Q ss_pred             cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcc--cccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--
Q 014631          214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGS--MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--  289 (421)
Q Consensus       214 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s--~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--  289 (421)
                      +|+++|+|++|+.+....     ...++.... +...|  .+|.++ +| +.|++++++       +++.+.+.....  
T Consensus       154 ~~~~li~D~a~~~g~~~~-----~~~~g~~~~-~~~~s~~~~k~~~-~g-~gG~~~~~~-------~~l~~~~~~~~~~g  218 (390)
T 3b8x_A          154 RDIILLEDNCESMGATFN-----NKCAGTFGL-MGTFSSFYSNHIA-TM-EGGCIVTDD-------EEIYHILLCIRAHG  218 (390)
T ss_dssp             SCCEEEEECTTCTTCEET-----TEETTSSSS-EEEEECCTTSSSC-SS-SCEEEEESC-------HHHHHHHHHHTBTT
T ss_pred             cCCEEEEECcCcccCEEC-----Ccccccccc-eEEEEccCCCCCc-cC-CceEEEeCC-------HHHHHHHHHHHhcC
Confidence            999999999998532111     112222111 22222  245532 23 348888853       234333322110  


Q ss_pred             ------------------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          290 ------------------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       290 ------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                                                    .....+.+...++...+     +++++..++.+++++++.+.|+++|++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~  293 (390)
T 3b8x_A          219 WTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYLD  293 (390)
T ss_dssp             BSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred             CCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence                                          00113334443333333     3467788888899999999999988887


Q ss_pred             ccCCC--Ccee-EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC---CCCCC----------------------CCe
Q 014631          340 CPRKP--EGSM-FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG---MAVGM----------------------KNW  391 (421)
Q Consensus       340 ~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g---~~~~~----------------------~~~  391 (421)
                      +. .+  ..++ .+++.++...   ..+..++...| .++||.+.++   ..+..                      ...
T Consensus       294 ~~-~~~~~~~~~~~~i~~~~~~---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (390)
T 3b8x_A          294 VQ-QETGESSWFGFSFIIKKDS---GVIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG  368 (390)
T ss_dssp             EC-CCCSBCCCCEEEEEECTTS---CCCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred             cC-CCCCCcccEEEEEEecCcC---cccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence            33 32  1222 2455554210   11355566555 6789999873   21111                      135


Q ss_pred             EEEEec--CCHHHHHHHHHHH
Q 014631          392 LRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       392 iRi~~~--~~~e~l~~~~~~l  410 (421)
                      +|++++  ++++|++++++.|
T Consensus       369 l~l~~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          369 LFVGNHQIELFDEIDYLREVL  389 (390)
T ss_dssp             EEEECCSSCCHHHHHHHHHHT
T ss_pred             EEeeCCCCCCHHHHHHHHHhh
Confidence            999987  7899999999876

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.93  E-value=5.4e-24  Score=201.90  Aligned_cols=283  Identities=16%  Similarity=0.131  Sum_probs=193.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-----hcCceeEeee
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-----HTRLEIRHFD  161 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~~~  161 (421)
                      ...+|++.++++.+        .+..+++++|++|+.. +..++++||+|+++++.|.+....+.     ..|.+++.++
T Consensus        68 ~~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~  138 (400)
T 3nmy_A           68 TRFAYERCVAALEG--------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD  138 (400)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred             HHHHHHHHHHHHhC--------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence            34688888888873        2367777778999998 45678999999999999996655543     3588888876


Q ss_pred             ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                      .+       |++++++.+++++++|++++|+||||.+++   +++|+++|++||+++|+|++|+...+.    .++ .++
T Consensus       139 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g  203 (400)
T 3nmy_A          139 LT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ----RPL-SLG  203 (400)
T ss_dssp             TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CGG-GGT
T ss_pred             CC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC----Chh-hcC
Confidence            52       789999999989999999999999999975   899999999999999999999864321    111 122


Q ss_pred             CCCCEEEEcccccccCCCCceEEE--EEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGW--LVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                         ..+++.|+||.++.+|.++|.  +++.+       +++.+.+..... ...+.++..+..+...++.     +..+.
T Consensus       204 ---~div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-----l~~r~  268 (400)
T 3nmy_A          204 ---ADLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-----LPLRM  268 (400)
T ss_dssp             ---CSEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             ---CcEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-----HHHHH
Confidence               238899999999888888766  44432       346666655443 2345666666665555543     45566


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      ++..++...+.+.|++.|.+..+..|.                .|.+++++++...    .....++.. ++-.++.+..
T Consensus       269 ~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----~~~~~~~~~-l~~~~~~~s~  343 (400)
T 3nmy_A          269 RAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----DAAKRFCEK-TELFTLAESL  343 (400)
T ss_dssp             HHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----HHHHHHHHH-CSSSEECSCC
T ss_pred             HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----HHHHHHHHc-CCcceEecCC
Confidence            777888889999999887765333332                3567888886310    012233333 2333444444


Q ss_pred             CCCCC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          383 GMAVG-----------------------MKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       383 g~~~~-----------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      |..+.                       .++.+|+|++..  +.+.+++.|.++++
T Consensus       344 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle--~~~dli~dl~~al~  397 (400)
T 3nmy_A          344 GGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIE--DLGDLRGDLERALV  397 (400)
T ss_dssp             CSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHC
T ss_pred             CCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence            43221                       146899999842  33445566666664

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.93  E-value=2.4e-24  Score=207.70  Aligned_cols=324  Identities=19%  Similarity=0.192  Sum_probs=199.8

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHH--HHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAV--VDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~--~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      ...++.|.+.    .+.|+.+.+.+  .+....  .+.|.+  .+|..++.+.+.+++.+.+|  .+++++++++|++.+
T Consensus        66 ~~~~~~g~~~----~~~p~~v~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~g--~~~~~i~~~~g~taa  137 (438)
T 1wyu_A           66 KAFLGGGVRS----HHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAG--LEIANASMYDGATAL  137 (438)
T ss_dssp             TCCCCSSCCC----CCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHH
T ss_pred             ccccCCCccC----CcCcHHHHHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHhC--CCccceEEeCcHHHH
Confidence            3456666543    35566664444  222222  122321  33433333444444443333  456788999999944


Q ss_pred             HHHHHHH-hcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcc
Q 014631          122 IQVILTV-LARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCG  196 (421)
Q Consensus       122 l~~~~~~-l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG  196 (421)
                      ++.+..+ ..++||+|+++.++|+++...+    +..|++++.++. .  ++.+|+++    +++++++|++++| ||||
T Consensus       138 ~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~--~~~~d~~~----i~~~t~~v~i~~p-n~tG  209 (438)
T 1wyu_A          138 AEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-E--GGRTPLPE----VGEEVGAVVVQNP-NFLG  209 (438)
T ss_dssp             HHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-B--TTBCCCCC----CCTTEEEEEEESS-CTTS
T ss_pred             HHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-c--CCccCHHH----hCCCeEEEEEECC-CCCe
Confidence            3333322 2478999999999999887554    458999998885 2  34577776    5678999999999 9999


Q ss_pred             cccCHHHHHHHHHHHHhcCcEEEEccc-ccccccCCCCcccccccCCCCCEEEEcccccccC----CCCceEEEEEeeCC
Q 014631          197 NVFTYQQLQKIAEKARKLGIMVISDEV-YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI----VPGWRLGWLVTSDP  271 (421)
Q Consensus       197 ~~~~~~~l~~i~~~~~~~~~~li~De~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~  271 (421)
                      .+.   ++++|.++|+++|+++|+|.. ++...+   .. + ..++.+   +++.| +|.|+    +.|.++||+++++.
T Consensus       210 ~~~---~l~~i~~la~~~g~~vivd~d~~a~g~~---~~-~-~~~g~D---~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~  277 (438)
T 1wyu_A          210 ALE---DLGPFAEAAHGAGALFVAVADPLSLGVL---KP-P-GAYGAD---IAVGD-GQSLGLPMGFGGPHFGFLATKKA  277 (438)
T ss_dssp             BCC---CHHHHHHHHHHTTCEEEEECCTTGGGTB---CC-H-HHHTCS---EEEEE-CTTTTCCCGGGCSCCEEEEECGG
T ss_pred             EEe---cHHHHHHHHHHcCCEEEEEechhhccCc---CC-C-ccCCCC---EEEEC-CcccCCCccCCCCCeeEEEEcHH
Confidence            996   588999999999999996632 221111   11 1 222222   55656 55544    45668999998642


Q ss_pred             CcchhHHHHHHHHhhh-------------------------cccccCC-----chHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          272 SGILQELRIVDSIKGY-------------------------LNISSGP-----ATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       272 ~~~~~~~~~~~~~~~~-------------------------~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                              +.+.+...                         .....++     +.+...++..++......+++++.+++
T Consensus       278 --------~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~  349 (438)
T 1wyu_A          278 --------FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKS  349 (438)
T ss_dssp             --------GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence                    22222100                         0001111     222222222224322345688889999


Q ss_pred             HHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeE--EeCCCCCCCCeEEEEec--
Q 014631          322 RDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV--LPGMAVGMKNWLRITFA--  397 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v--~~g~~~~~~~~iRi~~~--  397 (421)
                      +++++++.+.|+++||+.+. .+. .++.++.+...     .+..++..+|. ++||.+  .++..|. ++++|+|++  
T Consensus       350 ~~~~~~l~~~L~~~~g~~~~-~~~-~~~~~~~~~~~-----~~~~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~  420 (438)
T 1wyu_A          350 VEMAHKLHALLLEVPGVRPF-TPK-PFFNEFALALP-----KDPEAVRRALA-ERGFHGATPVPREYG-ENLALFAATEL  420 (438)
T ss_dssp             HHHHHHHHHHHTTSTTCEEC-SCS-SBCSEEEEECS-----SCHHHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTT
T ss_pred             HHHHHHHHHHHhcCCCeEEC-CCC-CeEEEEEEeCC-----CCHHHHHHHHH-HCCceeccccccccC-CCeEEEEeccc
Confidence            99999999999999898843 443 33433333211     14667777765 569998  6676554 689999998  


Q ss_pred             CCHHHHHHHHHHHHHHH
Q 014631          398 IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~  414 (421)
                      ++++++++++++|++++
T Consensus       421 ~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          421 HEEEDLLALREALKEVL  437 (438)
T ss_dssp             CCHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHh
Confidence            78999999999998764

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.93  E-value=1.7e-23  Score=200.36  Aligned_cols=289  Identities=18%  Similarity=0.139  Sum_probs=190.8

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEee-ec
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHF-DL  162 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~-~~  162 (421)
                      ..++++.++++++      ..  ..+++++|++|++.++.+++++||+|+++.++|+++...+    ...|++++.+ +.
T Consensus        60 ~~~l~~~la~~~g------~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  131 (421)
T 2ctz_A           60 VDVLEKRLAALEG------GK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE  131 (421)
T ss_dssp             HHHHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred             HHHHHHHHHHHhC------CC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence            5789999999984      22  3355555699999999998899999999999999876665    6789988887 54


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc-cccccCCCCcccccccC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~  241 (421)
                      +       |++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++| +.. +.+.   ++ ..+
T Consensus       132 ~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~~  196 (421)
T 2ctz_A          132 E-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AWG  196 (421)
T ss_dssp             C-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GGT
T ss_pred             C-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-ccC
Confidence            2       789999999889999999999999999977   889999999999999999999 543 3222   12 222


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCC-cc-hh-HHHHH---------------------HHHh--hhcccccCCc
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPS-GI-LQ-ELRIV---------------------DSIK--GYLNISSGPA  295 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~-~~-~~-~~~~~---------------------~~~~--~~~~~~~~~~  295 (421)
                      .   .+++.|+||.++.+|.|+|++++.+.. .+ .. ...+.                     ...+  .........+
T Consensus       197 ~---Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~  273 (421)
T 2ctz_A          197 A---ALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALG  273 (421)
T ss_dssp             C---SEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCC
T ss_pred             C---eEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCC
Confidence            2   388889999999999999998886311 11 00 00111                     0000  0011112345


Q ss_pred             hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-----------------CceeEEEEecCccc
Q 014631          296 TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-----------------EGSMFVMVKLNLSL  358 (421)
Q Consensus       296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-----------------~~~~~~~~~~~~~~  358 (421)
                      ++...++...++.     +..+.++..++.+++.+.|+++|++..+..|                 ..+..+.+.++...
T Consensus       274 ~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~  348 (421)
T 2ctz_A          274 PFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGY  348 (421)
T ss_dssp             HHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHH
T ss_pred             HHHHHHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCH
Confidence            5554444444432     4455566668899999999998887643222                 22445666665210


Q ss_pred             ccCCCChHHHHHHHHhhcCeeEEeCCCC----------------------CC-CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          359 LEGISDDMEFALQLAKEESVIVLPGMAV----------------------GM-KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------------------~~-~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                          .....++..+ +..++.+..|...                      +. ++.+|+|++.  |+++.+++.|.+++
T Consensus       349 ----~~~~~~~~~l-~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~~al  420 (421)
T 2ctz_A          349 ----EAAKRFISRL-KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELKEAL  420 (421)
T ss_dssp             ----HHHHHHHHTC-SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHT
T ss_pred             ----HHHHHHHHhC-CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHh
Confidence                0122233222 3334444444211                      11 3789999874  47777777777764

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.93  E-value=3.6e-24  Score=199.71  Aligned_cols=326  Identities=11%  Similarity=0.060  Sum_probs=223.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC---CCC-CC------CCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-cCCHHHHHHHHHH
Q 014631           60 FRTTPVAADAVVDAVRSAEFD---CYS-PS------VGILPARRAIADYLNSELPCKLSP-DDVYL-TAGCKQAIQVILT  127 (421)
Q Consensus        60 ~~~~~~v~~a~~~~~~~~~~~---~y~-~~------~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~-~~g~~~al~~~~~  127 (421)
                      .+.|++|.+++.+.+.+...+   .+. ..      .-+.+.|+.++++++      +++ ++|+| |+|+|++++.++.
T Consensus        22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a~~   95 (377)
T 3e77_A           22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA------VPDNYKVIFLQGGGCGQFSAVPL   95 (377)
T ss_dssp             CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCCeEEEEcCchHHHHHHHHH
Confidence            588999999999987632110   000 11      124677788888873      433 57888 5899999999999


Q ss_pred             HhcCC--CCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631          128 VLARP--GANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       128 ~l~~~--gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      .+..+  ||+|++...++.+.  ...++..|..+..++.+.  ++..++++++..++++++.|.+++..|.||++.|.  
T Consensus        96 ~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~--~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi--  171 (377)
T 3e77_A           96 NLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLG--SYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF--  171 (377)
T ss_dssp             HHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCS--SSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--
T ss_pred             hccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCC--CcCCCCChHHhccCCCccEEEEeCccCchheEchh--
Confidence            98765  89998877766543  455667787777766543  34467778777888899999999888899999875  


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch---hHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL---QELRI  280 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~---~~~~~  280 (421)
                            +|+++|+++++|.+++.    |....++..++     +++.|.+|++|.+|  +|++++++.....   ..+.+
T Consensus       172 ------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~  234 (377)
T 3e77_A          172 ------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSV  234 (377)
T ss_dssp             ------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGG
T ss_pred             ------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCch
Confidence                  36789999999999987    44444555443     46678999998778  6888887532100   00011


Q ss_pred             H--HHHhhhcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCC--ceeEEEEec
Q 014631          281 V--DSIKGYLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCP-RKPE--GSMFVMVKL  354 (421)
Q Consensus       281 ~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~--~~~~~~~~~  354 (421)
                      .  ..........++++....+++.++++...+. +++.+.++.+++.+++++.|+++||+... ..+.  .+..+.+.+
T Consensus       235 ~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~  314 (377)
T 3e77_A          235 LEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRI  314 (377)
T ss_dssp             GCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEE
T ss_pred             hhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEc
Confidence            1  1111111234578888888888888764455 79999999999999999999999887721 1111  123355555


Q ss_pred             CcccccCCCC-hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          355 NLSLLEGISD-DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       355 ~~~~~~~~~~-~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +...  ...+ +..++..+ .++||.+.+|..  ..+.+|+|+.  ++++|++++++.|++++++.
T Consensus       315 ~~~~--~~~~~~~~~l~~l-~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~  375 (377)
T 3e77_A          315 GNAK--GDDALEKRFLDKA-LELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH  375 (377)
T ss_dssp             SSTT--CCHHHHHHHHHHH-HHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC--CchhHHHHHHHHH-HHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence            5310  0000 12455544 568999988863  2467999998  78999999999999998764

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.92  E-value=2e-23  Score=194.06  Aligned_cols=322  Identities=14%  Similarity=0.088  Sum_probs=221.1

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC---CC-CC------CCCHHHHHHHHHHHhhhCCCCCC-CCcE
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC---YS-PS------VGILPARRAIADYLNSELPCKLS-PDDV  112 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---y~-~~------~g~~~l~~~ia~~l~~~~~~~~~-~~~i  112 (421)
                      .++++|+-|. +     +.|++|.+++.+.+.+...+.   |. ..      ..+.+.|+.++++++      ++ +.+|
T Consensus         4 ~~~~~f~pgp-t-----~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~------~~~~~~v   71 (361)
T 3m5u_A            4 MRKINFSAGP-S-----TLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE------LNDDYEV   71 (361)
T ss_dssp             CCCEECCSSS-C-----CCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT------CCTTEEE
T ss_pred             cceEeecCCC-C-----CCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceE
Confidence            4667888774 3     678999999998875311100   10 11      225677788888873      43 4578


Q ss_pred             EE-cCCHHHHHHHHHHHhcCCCCeEEEcCCCCc--chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe
Q 014631          113 YL-TAGCKQAIQVILTVLARPGANILLPKPGFP--LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV  189 (421)
Q Consensus       113 ~~-~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~  189 (421)
                      +| |+|+|++++.++..+. +||++.+...++.  .+...++..|+++..++.+++..+.++++. +  ++++++++.++
T Consensus        72 ~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~lv~~~  147 (361)
T 3m5u_A           72 LFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNADYAYIC  147 (361)
T ss_dssp             EEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTSSEEEEE
T ss_pred             EEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCCCEEEEe
Confidence            87 9999999999999988 8886533222222  244556778999999988654322245666 3  78889999998


Q ss_pred             CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      +..|.||+..+.        +++ +|+++++|.+++.    |....++..+     .+++.|.+|++|.+|  +|+++++
T Consensus       148 ~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~~  207 (361)
T 3m5u_A          148 SNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFSNI-----ALFYGGVQKNAGISG--LSCIFIR  207 (361)
T ss_dssp             SEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCTTE-----EEEEEETTTTSSCTT--CEEEEEE
T ss_pred             CCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcccC-----CEEEEechhccCCCc--cEEEEEc
Confidence            888899998762        233 4999999999987    4333444332     266789999998777  7888886


Q ss_pred             CCCcchhHHHHHHHHhh--------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhc
Q 014631          270 DPSGILQELRIVDSIKG--------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      +        ++.+.+..              .....++++.....++.++++...+. +++.+.++.+++.+++++.|++
T Consensus       208 ~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~  279 (361)
T 3m5u_A          208 K--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL  279 (361)
T ss_dssp             H--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             H--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence            3        34333322              11123578888888888888754445 6899999999999999999999


Q ss_pred             CCCc-cccCCCC--ceeEEEEecCc-ccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHH
Q 014631          335 IPCI-TCPRKPE--GSMFVMVKLNL-SLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLG  408 (421)
Q Consensus       335 ~~g~-~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~  408 (421)
                      ++++ .....+.  ....+.+.++. ..     -+.++.. .++++||.+.+|...  .+.+|+|+.  ++.+|++++++
T Consensus       280 ~~g~~~~~~~~~~rs~~ivsf~~~~~~~-----~~~~~~~-~L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~  351 (361)
T 3m5u_A          280 SNGFYKGHADKKDRSLMNVSFNIAKNKD-----LEPLFVK-EAEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCE  351 (361)
T ss_dssp             STTSEEESSCGGGBCSSEEEEEESSCTT-----HHHHHHH-HHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHH
T ss_pred             CCCeeeccCCHHHcCCeEEEEECCCchh-----hhHHHHH-HHHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHH
Confidence            9766 4222222  12244555553 10     1234554 457789999887642  256999998  78999999999


Q ss_pred             HHHHHHHHh
Q 014631          409 RIKAFCQRH  417 (421)
Q Consensus       409 ~l~~~~~~~  417 (421)
                      .|+++.+++
T Consensus       352 al~~~~~~~  360 (361)
T 3m5u_A          352 FMKEFQGKY  360 (361)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999998764

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.92  E-value=8e-24  Score=198.55  Aligned_cols=329  Identities=13%  Similarity=0.056  Sum_probs=219.5

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYS--PSVGILPARRAIADYLNSELPCKLSP-DDVYL-  114 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~-  114 (421)
                      +.|....|+     +.|++|.+++.+.+.+..        .+..+  ....+.+.|+.++++++      +.+ ++|+| 
T Consensus        28 ~yl~~agpt-----~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~   96 (386)
T 3qm2_A           28 VFNFSSGPA-----MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFC   96 (386)
T ss_dssp             CEECCSSSC-----CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEE
T ss_pred             CccccCCCC-----CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEE
Confidence            344545555     678999999987664310        00111  13457899999999994      433 57888 


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc--hHHHHhhcCceeEeeecc-CCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKPGFPL--YEANARHTRLEIRHFDLL-PEKGWEVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      |+|+|++++.++..++++||+|++...++.+  +...++..| ++..++.+ .+.+..+++++++..+++++++|.+++.
T Consensus        97 t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~  175 (386)
T 3qm2_A           97 HGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPN  175 (386)
T ss_dssp             ESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSE
T ss_pred             cCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECC
Confidence            6899999999999999999998765554443  345566778 88888865 1233336788888888889999988888


Q ss_pred             CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          192 GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       192 ~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      .|.||+. .|   +++|.     +|+++++|.+++.    |..+.++..++     +.+.|.+|++|.+|  +|++++++
T Consensus       176 et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~  236 (386)
T 3qm2_A          176 ETIDGIAIDE---TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVRE  236 (386)
T ss_dssp             ETTTTEECCC---CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEG
T ss_pred             cCCcCEecCc---hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECH
Confidence            8899996 44   33333     7999999999987    44445555543     45678999998777  89999874


Q ss_pred             CC-----cchhHHHHH--HHHhhhcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCcccc-
Q 014631          271 PS-----GILQELRIV--DSIKGYLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCP-  341 (421)
Q Consensus       271 ~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-  341 (421)
                      ..     ...  +.+.  ...........+++.....++.++++...+. +++++.++.+++++++++.|+++ ++... 
T Consensus       237 ~~~~~~~~~~--p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~  313 (386)
T 3qm2_A          237 DLLGKAHESC--PSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRND  313 (386)
T ss_dssp             GGCSCCCTTS--CGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECC
T ss_pred             HHHhhhcccC--CcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence            32     000  0011  1111111223477888888888888754445 78999999999999999999987 55211 


Q ss_pred             CCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          342 RKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       342 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ..+.  ....+.+.++...     .+..++.. ++++||.+.+|...  .+.+|+|+.  ++++|++++++.|+++.+++
T Consensus       314 ~~~~~rs~~iv~f~~~~~~-----~~~~~~~~-L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~  385 (386)
T 3qm2_A          314 VAQANRSRMNVPFQLADNT-----LDKVFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH  385 (386)
T ss_dssp             BCGGGBCSSEEEEEESSGG-----GHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHcCceEEEEECCCcc-----ccHHHHHH-HHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            1121  1234555665311     13455555 57789999887644  256999998  68999999999999998764

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.92  E-value=4.2e-23  Score=207.75  Aligned_cols=313  Identities=12%  Similarity=0.039  Sum_probs=207.6

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-HhhcCceeEeeec
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN-ARHTRLEIRHFDL  162 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~~~~  162 (421)
                      +...+.++++.+|++++      .+ ..+++++|+++++..++.+++++||+|+++.++|.++... +...|+++++++.
T Consensus       171 ~~~~i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~  243 (730)
T 1c4k_A          171 HEGPAVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQT  243 (730)
T ss_dssp             TBTHHHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECE
T ss_pred             ChHHHHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeC
Confidence            33346799999999873      32 4588899999999999999999999999999999998887 8889999988876


Q ss_pred             cCCCCc----cCCHHHH-----HhhhccC------c----eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631          163 LPEKGW----EVDLDGL-----EALADEN------T----VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV  223 (421)
Q Consensus       163 ~~~~~~----~~d~e~l-----~~~~~~~------~----~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~  223 (421)
                      ..+ .+    .+|++++     +++++++      +    +++++++| |++|.+.+   +++|+++|+++|+++|+|++
T Consensus       244 ~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeA  318 (730)
T 1c4k_A          244 NRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSA  318 (730)
T ss_dssp             EEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECT
T ss_pred             Ccc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcc
Confidence            432 23    3688888     8888665      4    78899999 58999964   88999999999999999999


Q ss_pred             cccc-ccCCCC--ccccc--ccCC-CCCEEEEcccccccCCCCceE-EEEEeeCCCc-----chhHHHHHHHHhhhcccc
Q 014631          224 YDHL-TFGSTP--YVRMG--VFGS-TVPVITLGSMSKRWIVPGWRL-GWLVTSDPSG-----ILQELRIVDSIKGYLNIS  291 (421)
Q Consensus       224 ~~~~-~~~~~~--~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  291 (421)
                      |+.. .+++..  ..++.  .++. +.+++++.|+||++  +|.+. |++++++...     ..+...+.+.+..  ..+
T Consensus       319 h~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~--~~s  394 (730)
T 1c4k_A          319 WVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNL--FMS  394 (730)
T ss_dssp             TCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHH--HSC
T ss_pred             cccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHH--hCC
Confidence            9753 333211  11121  1122 23568899999985  44443 5665554320     1111112222211  123


Q ss_pred             cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCC-------------------------
Q 014631          292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPE-------------------------  345 (421)
Q Consensus       292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~-------------------------  345 (421)
                      ++++....+++..++.........+..+++.++.+.+++.|++ ++|+.++ .|.                         
T Consensus       395 tsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~  473 (730)
T 1c4k_A          395 TSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFE  473 (730)
T ss_dssp             SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCC
T ss_pred             CCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccC
Confidence            4666666666555554322223355567788888888999987 6787733 332                         


Q ss_pred             ------------ce-eE-----EEEecCcc-----c-ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631          346 ------------GS-MF-----VMVKLNLS-----L-LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE  399 (421)
Q Consensus       346 ------------~~-~~-----~~~~~~~~-----~-~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~  399 (421)
                                  .+ ++     +.+..+..     . .....+...+...| +++||.+....    ...+|++++  ++
T Consensus       474 ~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L-~e~GI~v~~~~----~~~ir~~~s~g~t  548 (730)
T 1c4k_A          474 KGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKSD----LNSILFLMTPAET  548 (730)
T ss_dssp             TTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEEC----SSEEEEECCTTCC
T ss_pred             ccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHH-HHCCcEEEECC----CCeEEEEeCCCCC
Confidence                        11 11     33444310     0 00012355555554 66799886532    467899887  78


Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q 014631          400 PSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~~  418 (421)
                      ++++++++++|.++.+++.
T Consensus       549 ~e~i~~Ll~aL~~i~~~~~  567 (730)
T 1c4k_A          549 PAKMNNLITQLLQLQRLIE  567 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence            9999999999999887653

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.91  E-value=1.4e-22  Score=191.82  Aligned_cols=270  Identities=16%  Similarity=0.159  Sum_probs=185.6

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---cCCHHHHHHHHHHHhcCCCC
Q 014631           64 PVAADAVVDAVRS------AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL---TAGCKQAIQVILTVLARPGA  134 (421)
Q Consensus        64 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd  134 (421)
                      ..+.+++.+....      ...+.|+. .+..+|++.+|++++      .  +..++   ++||++|+..++.+++++||
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g------~--e~alv~p~~~sGt~Ai~~al~all~~GD  102 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK------T--EAALVRPQIISGTHAISTVLFGILRPDD  102 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT------C--SEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC------C--CcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence            3466777665311      11223433 356789999999883      2  33444   88999999999999999999


Q ss_pred             eEEEcC-CCCcchHH----------HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC----CCCCccccc
Q 014631          135 NILLPK-PGFPLYEA----------NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN----PGNPCGNVF  199 (421)
Q Consensus       135 ~Vl~~~-p~y~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~----p~nptG~~~  199 (421)
                      +|+++. +.|.++..          .++..|++++.++.++  ++.+|++++++++++++++|++.+    |+||||.+ 
T Consensus       103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v-  179 (409)
T 3jzl_A          103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI-  179 (409)
T ss_dssp             EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH-
T ss_pred             EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc-
Confidence            999998 99998874          3456788888887653  456899999999998999999999    99999988 


Q ss_pred             CHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchh
Q 014631          200 TYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQ  276 (421)
Q Consensus       200 ~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~  276 (421)
                        .++++|+++|++  +|+++|+|++|+.+.+...+   . ..+.   .++++|+||.++.+| .+.||++++       
T Consensus       180 --~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~g~---Div~~S~sK~lgg~~~~~GG~v~~~-------  243 (409)
T 3jzl_A          180 --EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EVGA---DIIAGSLIKNPGGGLAKTGGYIAGK-------  243 (409)
T ss_dssp             --HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GGTC---SEEEEETTSGGGTTTCSSCEEEEEC-------
T ss_pred             --ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-ccCC---eEEEECccccCCccCCceEEEEEeC-------
Confidence              789999999999  99999999999876532221   1 1222   388999999987766 446898885       


Q ss_pred             HHHHHHHHhhhccc-----ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce----
Q 014631          277 ELRIVDSIKGYLNI-----SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS----  347 (421)
Q Consensus       277 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~----  347 (421)
                       +++++.+......     ..++......++...+.     ....+.++..+++.++.+.|+++ |+. + .|..+    
T Consensus       244 -~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~~~a~~la~~L~~~-g~~-v-~p~~~~~~~  314 (409)
T 3jzl_A          244 -EALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAIKGARFTAAMLAEF-GVE-A-DPVWDAPRT  314 (409)
T ss_dssp             -HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTSCCS
T ss_pred             -HHHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cCCCCCCCc
Confidence             3577777653211     11222211233333332     24566777888999999999988 655 3 23222    


Q ss_pred             -eEEEEecCcccccCCCChHHHHHHHHhhc
Q 014631          348 -MFVMVKLNLSLLEGISDDMEFALQLAKEE  376 (421)
Q Consensus       348 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  376 (421)
                       ..+.+.+....     ....++..| ++.
T Consensus       315 ~~i~~i~l~~~~-----~~~~~~~~L-~~~  338 (409)
T 3jzl_A          315 DLIQSVSFHNKE-----KMVAFAQAI-QAA  338 (409)
T ss_dssp             SSCCEEECSCHH-----HHHHHHHHH-HHT
T ss_pred             cEEEEEEeCCHH-----HHHHHHHHH-Hhc
Confidence             24555665321     244666655 444

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.91  E-value=1.6e-22  Score=192.01  Aligned_cols=254  Identities=15%  Similarity=0.124  Sum_probs=178.2

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---cCCHHHHHHHHHHHhcCCCC
Q 014631           64 PVAADAVVDAVRS------AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL---TAGCKQAIQVILTVLARPGA  134 (421)
Q Consensus        64 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd  134 (421)
                      +.+.+++.+....      .....|+. .+..+|++.++++++        .+..++   ++||++|+..++.++++|||
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~-~g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pGD  117 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYND-IGRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPND  117 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCc-hhHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence            4577777765322      11223433 356889999999883        233455   78899999999999999999


Q ss_pred             eEEEcC-CCCcchH-----------HHHhhcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeC----CCCCcc
Q 014631          135 NILLPK-PGFPLYE-----------ANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVN----PGNPCG  196 (421)
Q Consensus       135 ~Vl~~~-p~y~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~----p~nptG  196 (421)
                      +|++++ +.|.++.           ..++..|++++.++.   +++.+|+++++++++  +++++|++++    |+||||
T Consensus       118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg  194 (427)
T 3hvy_A          118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL  194 (427)
T ss_dssp             EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred             EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence            999999 9998876           334567888888876   345789999999998  7899999999    999999


Q ss_pred             cccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCc
Q 014631          197 NVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSG  273 (421)
Q Consensus       197 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~  273 (421)
                      .+   .++++|+++|++  +|+++++|++|+.+.+...   ++ ..+.   .++++|+||.++.+| .+.||++++    
T Consensus       195 ~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~GG~i~~~----  260 (427)
T 3hvy_A          195 RI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE---PT-DVGA---DIIAGSLIKNIGGGIATTGGYIAGK----  260 (427)
T ss_dssp             CH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred             cH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCC---Cc-ccCC---eEEEECCcccccccccceEEEEEEC----
Confidence            88   889999999999  8999999999987653322   11 1222   388999999987655 456888885    


Q ss_pred             chhHHHHHHHHhhhccc--c---cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631          274 ILQELRIVDSIKGYLNI--S---SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM  348 (421)
Q Consensus       274 ~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  348 (421)
                          +++++++......  .   .+++......+...+.     ....+.++..+++..+.+.|+++ |+. + .|..+.
T Consensus       261 ----~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~-----~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~  328 (427)
T 3hvy_A          261 ----EEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLF-----MAPHVTIEAVKGAVFCARIMELA-GFD-V-LPKYND  328 (427)
T ss_dssp             ----HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred             ----HHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHh-----HHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence                4677777664321  1   1221221233222232     24566778888999999999988 555 3 232222


Q ss_pred             -----EEEEecC
Q 014631          349 -----FVMVKLN  355 (421)
Q Consensus       349 -----~~~~~~~  355 (421)
                           .+.+.+.
T Consensus       329 ~~~~li~~~~l~  340 (427)
T 3hvy_A          329 KRTDIIQAIKFN  340 (427)
T ss_dssp             CCSSSEEEEECS
T ss_pred             CCceEEEEEeCC
Confidence                 5666665

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.91  E-value=1.7e-22  Score=191.92  Aligned_cols=247  Identities=15%  Similarity=0.114  Sum_probs=175.2

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhcCCCCeEEEcC-CCCcchHH-----------HHh
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLARPGANILLPK-PGFPLYEA-----------NAR  151 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~-----------~~~  151 (421)
                      .+..+|++.+|++++      .+ ..+++  ++||++|+..++.++++|||+|++++ +.|.++..           .+.
T Consensus        73 ~~~~~Le~~lA~l~g------~e-~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~  145 (427)
T 3i16_A           73 IGRDSLDAVYARVFN------TE-SALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLK  145 (427)
T ss_dssp             HHHHHHHHHHHHHHT------CS-EEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTG
T ss_pred             HHHHHHHHHHHHHhC------Cc-ceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHH
Confidence            356789999999984      22 23443  78889999999999999999999999 99988763           345


Q ss_pred             hcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeC----CCCCcccccCHHHHHHHHHHHHh--cCcEEEEccc
Q 014631          152 HTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVN----PGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEV  223 (421)
Q Consensus       152 ~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~----p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~  223 (421)
                      ..|++++.++.+.  ++.+|++++++.++  +++++|++++    |+||||.+   .++++|+++|++  +|+++++|++
T Consensus       146 ~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~~~~~g~~livD~a  220 (427)
T 3i16_A          146 EFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVKNIRKDIICFVDNC  220 (427)
T ss_dssp             GGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHHHHCTTSEEEEECT
T ss_pred             HcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHHHhCCCCEEEEECC
Confidence            6788888887653  34689999999998  7899999999    99999988   889999999999  9999999999


Q ss_pred             ccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc--c-cCCch-HH
Q 014631          224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI--S-SGPAT-FV  298 (421)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~-~~  298 (421)
                      |+.+.+...   ++ ..+.   .++++|+||.++.+| .+.||++++        +++++++......  . ....+ +.
T Consensus       221 ~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~gG~i~~~--------~~li~~l~~~~~~~~~g~~~~~~~~  285 (427)
T 3i16_A          221 YGEFMDTKE---PT-DVGA---DLIAGSLIKNIGGGIAPTGGYLAGT--------KDCIEKTSYRLTVPGIGGECGSTFG  285 (427)
T ss_dssp             TTTTSSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEEC--------HHHHHHHHHHHSCTTTGGGCCCCTT
T ss_pred             CccccccCC---cc-ccCC---eEEEecCcccCCCCCCceEEEEEEC--------HHHHHHHHHhcccCccCccCCccHH
Confidence            988653322   11 1222   388999999987766 567999985        4677777663221  1 11111 21


Q ss_pred             -HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee-----EEEEecCcccccCCCChHHHHHHH
Q 014631          299 -QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM-----FVMVKLNLSLLEGISDDMEFALQL  372 (421)
Q Consensus       299 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l  372 (421)
                       ...+...+     .....+.++..+++..+.+.|+++ ++. + .|..+.     .+.+.+....     ....+++.+
T Consensus       286 ~a~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~~~~~~i~~i~l~~~~-----~~~~f~~~l  352 (427)
T 3i16_A          286 VVRSMYQGL-----FLAPHISMEALKGAILCSRIMELA-GFE-V-MPKYDEKRSDIIQSIKFNDKD-----KLIEFCKGI  352 (427)
T ss_dssp             CHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTSCCSSSCEEEECSSHH-----HHHHHHHHH
T ss_pred             HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCCCCccEEEEEEECCHH-----HHHHHHHHH
Confidence             22222222     234567778889999999999988 555 3 333332     5666665321     244566655

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.91  E-value=3e-22  Score=203.38  Aligned_cols=308  Identities=9%  Similarity=0.003  Sum_probs=202.4

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG  167 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  167 (421)
                      +.++++.++++++      . .+.+++++|+++++..++.+++++||+|+++.++|.++...+...|+++++++...+ .
T Consensus       207 v~~~ee~la~l~G------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~  278 (755)
T 2vyc_A          207 FGESEKYAARVFG------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-R  278 (755)
T ss_dssp             HHHHHHHHHHHHT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-T
T ss_pred             HHHHHHHHHHHhC------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-c
Confidence            4688888888873      3 346788999999999999999999999999999999998889999999999886543 2


Q ss_pred             cc----C-----CHHHHHhhhcc--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631          168 WE----V-----DLDGLEALADE--NTV--------AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT  228 (421)
Q Consensus       168 ~~----~-----d~e~l~~~~~~--~~~--------~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  228 (421)
                      ++    +     |++++++++++  +++        ++++++| ||+|.+.+   +++|+++|++||+++++|++|+.+.
T Consensus       279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~  354 (755)
T 2vyc_A          279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYA  354 (755)
T ss_dssp             TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred             cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhc
Confidence            33    4     99999998854  344        8889998 69999954   8889999999999999999997542


Q ss_pred             -cCCC--Ccccccc--cC-CCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHH
Q 014631          229 -FGST--PYVRMGV--FG-STVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGA  301 (421)
Q Consensus       229 -~~~~--~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (421)
                       +++.  +..++..  .+ ..++++++.|+||++  +|.+ .|++++++.....+...+.+.+..  ..+++++.+...+
T Consensus       355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~--~~s~sp~~~~iaa  430 (755)
T 2vyc_A          355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMM--HATTSPLYAICAS  430 (755)
T ss_dssp             GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHH--TSCSSCCHHHHHH
T ss_pred             ccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHH--hCCCCHHHHHHHH
Confidence             3221  1122211  12 234567899999984  4554 577777654101111122222222  1234677776666


Q ss_pred             HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC---------ccccCCCC---------------------------
Q 014631          302 VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC---------ITCPRKPE---------------------------  345 (421)
Q Consensus       302 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g---------~~~~~~~~---------------------------  345 (421)
                      +..+++.......++..++..++.+++++.|+++++         ++++ .|.                           
T Consensus       431 l~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (755)
T 2vyc_A          431 NDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTTVQDC  509 (755)
T ss_dssp             HHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHHCGGG
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccchhhh
Confidence            666655322222345566666666777777765544         4322 221                           


Q ss_pred             ----------------ce------eEEEEecCcccccC-----CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-
Q 014631          346 ----------------GS------MFVMVKLNLSLLEG-----ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-  397 (421)
Q Consensus       346 ----------------~~------~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-  397 (421)
                                      .+      .-+.+.++.....|     +.+...+.. .|+++||.+...    ....+|++++ 
T Consensus       510 ~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~-~L~~~gI~~e~~----~~~~v~~~~~~  584 (755)
T 2vyc_A          510 WVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTA-WLGRHGIVPTRT----TDFQIMFLFSM  584 (755)
T ss_dssp             TBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHH-HHHTTTCCCSEE----CSSEEEEECCT
T ss_pred             hccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHH-HHHHCCCEEeec----CCCeEEEEECC
Confidence                            11      12233333211111     123345554 457799987543    2578999987 


Q ss_pred             -CCHHHHHHHHHHHHHHHHHh
Q 014631          398 -IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~~~~  417 (421)
                       ++++++++++++|.++.+.+
T Consensus       585 g~t~~~~~~l~~al~~~~~~~  605 (755)
T 2vyc_A          585 GVTRGKWGTLVNTLCSFKRHY  605 (755)
T ss_dssp             TCCTTTTHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhh
Confidence             78999999999999987655

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.90  E-value=1.7e-22  Score=192.99  Aligned_cols=252  Identities=16%  Similarity=0.182  Sum_probs=170.1

Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC-CCCcchHHHH----------hhcCceeEee
Q 014631           92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK-PGFPLYEANA----------RHTRLEIRHF  160 (421)
Q Consensus        92 ~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~----------~~~g~~~~~~  160 (421)
                      ++.+.+++.+.+|......+++++ ||++|+..++.+++++||+|++++ |.|.++...+          +..|++++.+
T Consensus        67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v  145 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV  145 (431)
T ss_dssp             HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC
T ss_pred             HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEe
Confidence            444555554444433222233355 678999999999999999999998 9999887554          3478898888


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEe-CCCCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIV-NPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRM  237 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~-~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~  237 (421)
                      +.++  ++.+|++++++.+++++++|+++ +|+||+|..++.+++++|+++|++  +|+++|+|++|+.+.+...+   .
T Consensus       146 ~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~---~  220 (431)
T 3ht4_A          146 PLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP---C  220 (431)
T ss_dssp             CBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG---G
T ss_pred             CCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc---c
Confidence            8754  36799999999999899999998 589999999999999999999999  99999999999987654331   1


Q ss_pred             cccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-----ccCCchHHHHHHHHHhhccch
Q 014631          238 GVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-----SSGPATFVQGAVPQIFKNTKE  311 (421)
Q Consensus       238 ~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~  311 (421)
                       .++.   .++++|+||.++. .+...||++++        +++++.+......     ..+++.....++...+.    
T Consensus       221 -~~g~---Di~~~S~sK~lgg~~~~~GG~v~~~--------~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~----  284 (431)
T 3ht4_A          221 -HVGA---DLMAGSLIKNPGGGIVKTGGYIVGK--------EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF----  284 (431)
T ss_dssp             -GTTC---SEEEEETTSGGGTTTCSSCEEEEEC--------HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH----
T ss_pred             -ccCC---eEEEcCccccCCCCCCCceEEEEec--------HHHHHHHHHHhccCCcccccCccHHHHHHHHhHhh----
Confidence             2222   2889999999654 22344999985        3566766553321     11221121222223332    


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCcccc---CCCCceeEEEEecCcccccCCCChHHHHHHH
Q 014631          312 DFFSKIVDILRDTADICYDRIKEIPCITCP---RKPEGSMFVMVKLNLSLLEGISDDMEFALQL  372 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  372 (421)
                       ....+.++..+++..+.+.|+++ |+.+.   ..+..+....+.++...     ...+++..+
T Consensus       285 -~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~~~-----~~~~~~~~l  341 (431)
T 3ht4_A          285 -LAPHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDDKD-----RMIAFCQAI  341 (431)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCCHH-----HHHHHHHHH
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCCHH-----HHHHHHHHH
Confidence             24556677778888888888876 55421   01122335556665321     244566655

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.89  E-value=2e-21  Score=185.09  Aligned_cols=340  Identities=12%  Similarity=0.084  Sum_probs=210.8

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|++||||..|.-.... -..+|.+.+|+.+++++... ...+.....++.+.+++.+    +   ..+.++|+++|++
T Consensus        84 ~dG~~ylD~~~g~~~~~l-GH~hp~v~~Av~~q~~~~~~-~~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsE  154 (454)
T 4ao9_A           84 ADGHRYADFIAEYTAGVY-GHSAPEIRDAVIEAMQGGIN-LTGHNLLEGRLARLICERF----P---QIEQLRFTNSGTE  154 (454)
T ss_dssp             TTCCEEEESSGGGGTTTT-CSCCHHHHHHHHHHHHTCSC-CCSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred             CCCCEEEEccccHHhhcc-cCCCHHHHHHHHHHHhcCCC-ccCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHH
Confidence            348899999777533222 25789999999999987532 1222333456666666665    2   4689999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcC------ceeEeeeccCCCCccCCHHHHHhhhccC--ceEEEEeC
Q 014631          121 AIQVILTVLAR--PGANILLPKPGFPLYEANARHTR------LEIRHFDLLPEKGWEVDLDGLEALADEN--TVAMVIVN  190 (421)
Q Consensus       121 al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g------~~~~~~~~~~~~~~~~d~e~l~~~~~~~--~~~i~~~~  190 (421)
                      |+..+++....  ..++|+..+.+|++....+....      .....+|.       -|++.+++.+...  ..+.++..
T Consensus       155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvE  227 (454)
T 4ao9_A          155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVE  227 (454)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEEC
T ss_pred             HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEec
Confidence            99999987642  23689999999988543222111      11222221       1778888877532  23445667


Q ss_pred             C-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          191 P-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       191 p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      | +...|.+ .+++.+++|.++|++||+++|+||++++  +.|.... ...++...+++   +++|.+ ..|+++|.+.+
T Consensus       228 Pv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a-~e~~gv~PDi~---t~gK~l-ggG~Piga~~~  300 (454)
T 4ao9_A          228 PMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGL-ANKLGIRSDLT---TLGKYI-GGGMSFGAFGG  300 (454)
T ss_dssp             SEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCH-HHHHTCCCSEE---EEEGGG-GTTSSCEEEEE
T ss_pred             cccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccc-hhccCCCCcEE---Eecccc-CCCCcceeeee
Confidence            7 5557765 5678899999999999999999999984  4444322 12233222333   678995 56899999998


Q ss_pred             eCCCcchhHHHHHHHHhhhc-----ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          269 SDPSGILQELRIVDSIKGYL-----NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                      +        .++++.+....     ..+.+.|+++++++.++|+... ++..++..+.-...++.+.+.+++.+-+..+ 
T Consensus       301 ~--------~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v-  371 (454)
T 4ao9_A          301 R--------ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQF-  371 (454)
T ss_dssp             C--------HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEE-
T ss_pred             H--------HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEE-
Confidence            5        46777665421     2345778999999988887543 3333333333333334444433333211111 


Q ss_pred             CCCceeEEEEecCcccccC-----CCCh---HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          343 KPEGSMFVMVKLNLSLLEG-----ISDD---MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      ... |.++.+.+.......     ..+.   ..++..+ .++||++.|.      +.+.+++..+++||++++++|++++
T Consensus       372 rg~-G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-l~~Gv~~~p~------~~~~~s~~~T~~dId~~l~al~~~l  443 (454)
T 4ao9_A          372 TGI-GSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHL-LNEDIYSSPR------GFVVLSLPLTDADIDRYVAAIGSFI  443 (454)
T ss_dssp             EEE-TTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHH-HHTTEECCTT------CEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             eee-ceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHH-HHCCEEEcCC------CCEEEeCCCCHHHHHHHHHHHHHHH
Confidence            122 345555553221100     0011   2334444 5679998774      3455566689999999999999999


Q ss_pred             HHhhhc
Q 014631          415 QRHAKQ  420 (421)
Q Consensus       415 ~~~~~~  420 (421)
                      .++.+.
T Consensus       444 ~~~~a~  449 (454)
T 4ao9_A          444 GGHGAL  449 (454)
T ss_dssp             HHSGGG
T ss_pred             Hhcccc
Confidence            987653

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.89  E-value=1.8e-20  Score=180.06  Aligned_cols=353  Identities=14%  Similarity=0.085  Sum_probs=217.0

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC-CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVG-ILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g-~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      ..|.+|+|+..|.-....+ ..+|.+.+++.+++++..  .|....+ ..+....+|+.|.+..+  .+.+.++|+++|+
T Consensus        64 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGs  138 (473)
T 4e3q_A           64 VNGRRYLDANSGLWNMVAG-FDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSGS  138 (473)
T ss_dssp             TTCCEEEETTTTTTTCTTC-SCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSHH
T ss_pred             CCCCEEEEcccCHHHhhcc-CCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCchH
Confidence            4588999998886443333 578999999999998732  2222111 12333344444444332  3456899999999


Q ss_pred             HHHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc------------eeEeeeccCC---CCccCC-----
Q 014631          120 QAIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL------------EIRHFDLLPE---KGWEVD-----  171 (421)
Q Consensus       120 ~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~---~~~~~d-----  171 (421)
                      +|+..+++...       +++ .+|+....+|++....+...+.            ....++.+..   ......     
T Consensus       139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  218 (473)
T 4e3q_A          139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV  218 (473)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence            99999998643       233 5788899999986544332211            1112221100   000011     


Q ss_pred             ---HHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          172 ---LDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       172 ---~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                         .+++++.+.   ++..+.++..| +...|++ .+++.+++|.++|++||+++|.||+++++.+.|..+ ....++..
T Consensus       219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~  297 (473)
T 4e3q_A          219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDFT  297 (473)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTCC
T ss_pred             HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCCC
Confidence               233444332   24456677777 5566765 566889999999999999999999999998877654 22334433


Q ss_pred             CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------c-ccccCCchHHHHHHHHHhhccchhHHH
Q 014631          244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------L-NISSGPATFVQGAVPQIFKNTKEDFFS  315 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~  315 (421)
                      .+++   +++|.++..++++|.++++        +++.+.+...       . ..+.+.++++++++.+.|+...++.+.
T Consensus       298 PDi~---t~~K~l~gG~~Pl~av~~~--------~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~  366 (473)
T 4e3q_A          298 PDAI---ISSKNLTAGFFPMGAVILG--------PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLA  366 (473)
T ss_dssp             CSEE---EECGGGGTTSSCCEEEEEC--------HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHH
T ss_pred             CChH---HhcccccCCCCCccccccc--------HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHH
Confidence            3344   5789975555999999996        3566665432       1 235678999999998888754333222


Q ss_pred             HHHHHHHHHHHHHHHHhh---cCCCccccCCCCceeEEEEecCccccc--CC---CChHHHHHHHHhhcCeeEEeCCCCC
Q 014631          316 KIVDILRDTADICYDRIK---EIPCITCPRKPEGSMFVMVKLNLSLLE--GI---SDDMEFALQLAKEESVIVLPGMAVG  387 (421)
Q Consensus       316 ~~~~~~~~~~~~~~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~ll~~~gv~v~~g~~~~  387 (421)
                         ++.+++.+++.+.|+   +.|.+..+ . .-|++..+++......  ..   ......+...+.++||++.|.    
T Consensus       367 ---~~~~~~g~~l~~~L~~l~~~~~v~~v-R-G~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----  437 (473)
T 4e3q_A          367 ---ENVRRLAPRFEERLKHIAERPNIGEY-R-GIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL----  437 (473)
T ss_dssp             ---HHHHHHHHHHHHHHHHHTTSTTEEEE-E-EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE----
T ss_pred             ---HHHHHHHHHHHHHHHHHhcCCCeeEE-e-ecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec----
Confidence               233333444444443   34554422 2 2245666665322110  00   011233344557789999874    


Q ss_pred             CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          388 MKNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       388 ~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                       .+.+|++++  .+++++++++++|.+++++..++
T Consensus       438 -g~~i~l~PPL~it~~eid~~~~~l~~al~~v~ae  471 (473)
T 4e3q_A          438 -GQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAE  471 (473)
T ss_dssp             -TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence             367999876  79999999999999999887654

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.88  E-value=3e-20  Score=177.79  Aligned_cols=352  Identities=16%  Similarity=0.135  Sum_probs=213.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CY-SPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y-~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      .|..++||..|.-.... ...+|.+.+|+.+++.+.... .+ .+.....++.+.+++..    + ....+.++++++|+
T Consensus        62 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~sGs  135 (456)
T 4atq_A           62 DGNSFIDLGSGIAVTSV-GASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNSGA  135 (456)
T ss_dssp             TSCEEEESSHHHHTCTT-CTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESSHH
T ss_pred             CCCEEEEccccHHHHhc-CCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCChH
Confidence            47888898777433222 357899999999998873211 11 12222234444444443    2 11245799999999


Q ss_pred             HHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-C-------------ceeEeeeccC----CCCccCCHHHH----
Q 014631          120 QAIQVILTVLA--RPGANILLPKPGFPLYEANARHT-R-------------LEIRHFDLLP----EKGWEVDLDGL----  175 (421)
Q Consensus       120 ~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~----~~~~~~d~e~l----  175 (421)
                      +|+..+++...  ...++|+..+.+|++....+... +             ..+..+|...    .....-+.+.+    
T Consensus       136 EA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  215 (456)
T 4atq_A          136 EAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAI  215 (456)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHH
Confidence            99999997653  23378999999999875443321 1             1123333211    00001122222    


Q ss_pred             ---HhhhccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          176 ---EALADENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       176 ---~~~~~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                         ++.+.++..+.++..| +...|.+ .+++.+++|.++|++||+++|+||+++++.+.|..+ ....++...+++   
T Consensus       216 ~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---  291 (456)
T 4atq_A          216 TMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPDII---  291 (456)
T ss_dssp             HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCSEE---
T ss_pred             HHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCchh---
Confidence               2223344556667777 5556765 567889999999999999999999999988777643 334444333344   


Q ss_pred             ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHH
Q 014631          251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFF-SKIVDILRDTADIC  328 (421)
Q Consensus       251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~  328 (421)
                      +++|.+ ..|+++|.++++        +++++.+..... .+++.++++++++.+.|+...++.+ ++..+.-....+.+
T Consensus       292 t~gK~l-ggg~P~~av~~~--------~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L  362 (456)
T 4atq_A          292 TMAKGI-AGGLPLSAITGR--------ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKL  362 (456)
T ss_dssp             EECGGG-GTTSSCEEEEEE--------HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             hhhhcc-cCcCCceeeEec--------HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence            567995 578999999986        356666655432 4568899999999998876433333 22222222233333


Q ss_pred             HHHhhcCCC-----ccccCCCCceeEEEEecCcccccCC--CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631          329 YDRIKEIPC-----ITCPRKPEGSMFVMVKLNLSLLEGI--SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE  399 (421)
Q Consensus       329 ~~~l~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~  399 (421)
                      .+...+.+.     +..+ . .-|++..+++........  .....+... +.++|+++.++...  .+.+|+.++  .+
T Consensus       363 ~~l~~~~~~~~~~~v~~V-R-G~Gl~~giel~~~~~~~~~~~~~~~v~~~-~~~~Gvl~~~~g~~--~~~irl~PpL~it  437 (456)
T 4atq_A          363 RELAAELSAGGGSVVGDI-R-GRGAMLAIELVQPGSKEPNAELTKAVAAA-CLKEGVIILTCGTY--GNVIRLLPPLVIS  437 (456)
T ss_dssp             HHHHHHCC-----CEEEE-E-EETTEEEEEEBCTTSCCBCHHHHHHHHHH-HHHTTEECEEECTT--SCEEEECCCTTCC
T ss_pred             HHHHHhcccccCCceEEe-e-ecceEEEEEEecCCCCCcCHHHHHHHHHH-HHHCCCEEEecCCC--CCEEEEECCCCCC
Confidence            333333321     2211 1 225666677743211100  002234444 46789999875332  468999987  78


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 014631          400 PSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~  417 (421)
                      ++++++++++|.++++.+
T Consensus       438 ~~~id~~l~~l~~al~a~  455 (456)
T 4atq_A          438 DELLIDGLEVLAAAIKAH  455 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999998753

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.86  E-value=1.3e-19  Score=180.93  Aligned_cols=307  Identities=13%  Similarity=0.057  Sum_probs=193.1

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL  163 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  163 (421)
                      +..-+.++++.+|++++.       ...+++++|++.|+..++.++++|||+|+++.++|.++...+...|+++++++..
T Consensus       193 ~~g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~  265 (715)
T 3n75_A          193 HSGPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPT  265 (715)
T ss_dssp             TBTHHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCC
T ss_pred             CcHHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecc
Confidence            333467999999999842       3456778888899999999999999999999999999999999999999998865


Q ss_pred             CCCCccC---------CHHHHHhhhcc--Cce---EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-
Q 014631          164 PEKGWEV---------DLDGLEALADE--NTV---AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-  228 (421)
Q Consensus       164 ~~~~~~~---------d~e~l~~~~~~--~~~---~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-  228 (421)
                      . +.+++         |++++++++.+  +++   ++++++| |++|.+++   +++|.++|+.++  +++||+|+.+. 
T Consensus       266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~  338 (715)
T 3n75_A          266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN  338 (715)
T ss_dssp             B-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGG
T ss_pred             c-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccc
Confidence            4 34543         89999998864  334   7899999 99999976   566677777663  78999998653 


Q ss_pred             cCCCCcccccccCC---CCC-EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHH
Q 014631          229 FGSTPYVRMGVFGS---TVP-VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQ  304 (421)
Q Consensus       229 ~~~~~~~~~~~~~~---~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (421)
                      +++. ......+..   .+. ++++.|+||+++.. ...|++.+++..  .  .+..+..... ..+++++.+..+++..
T Consensus       339 f~~~-~~~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i--~--~~~~~~~~~~-~~STSpsy~~~Aslda  411 (715)
T 3n75_A          339 FSPI-YEGKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDV--N--EETFNEAYMM-HTTTSPHYGIVASTET  411 (715)
T ss_dssp             GSGG-GTTSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCC--C--HHHHHHHHHH-TSCSSCCHHHHHHHHH
T ss_pred             cCCc-cccccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCchh--h--HHHHHHHHHh-hcCCCchHHHHHHHHH
Confidence            3321 111122221   133 35689999996432 135888887541  1  1122222222 2245777777777766


Q ss_pred             HhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC------ccccCCCC-----------------------cee------E
Q 014631          305 IFKNTKEDFFSKIVDILRDTADICYDRIKEIPC------ITCPRKPE-----------------------GSM------F  349 (421)
Q Consensus       305 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~~~~~~~~-----------------------~~~------~  349 (421)
                      +++......-.+..+++.++.+++++.|+++++      +.++ .++                       .+.      =
T Consensus       412 A~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~K  490 (715)
T 3n75_A          412 AAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIK  490 (715)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEES-SCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTE
T ss_pred             HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeecc-CcccccchhhhccCcccccccccccccCcccCCCeE
Confidence            664322222344566777777777777765532      2222 111                       000      1


Q ss_pred             EEEecCcccccC-----CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE--EecCCHHHHHHHHHHHHHHHHHh
Q 014631          350 VMVKLNLSLLEG-----ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI--TFAIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       350 ~~~~~~~~~~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi--~~~~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +++..+.....|     +.....+ .+.|+++||.+.-..    ...+-+  +++.+++++++++++|.++-+.+
T Consensus       491 l~i~~~~~~~~G~~~~~Gi~g~~~-~~~L~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~  560 (715)
T 3n75_A          491 VTLLTPGMEKDGTMSDFGIPASIV-AKYLDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRAF  560 (715)
T ss_dssp             EEEECSCBCTTSCBCSSCCCHHHH-HHHHHHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCccccCCCcHHHH-HHHHHHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence            222222110001     1223444 445578899886433    233333  44578899999999988876543

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.81  E-value=2.8e-19  Score=182.92  Aligned_cols=347  Identities=13%  Similarity=0.074  Sum_probs=207.7

Q ss_pred             CeeeccCCCCCCCCCCCC-cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHH
Q 014631           45 PIIPLGHGDPSAFPCFRT-TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAI  122 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al  122 (421)
                      +++|+..|.-....+ .. +|++.+|+.+++.+.....+.. ... +....+++.|.+..+  .. .+.++|+++|++|+
T Consensus       381 ~ylD~~sg~~~~~lG-h~~~p~i~~Ai~~Q~~~l~h~~~~~-~~~-~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA~  455 (831)
T 4a0g_A          381 QQFDACASWWTQGPD-PTFQAELAREMGYTAARFGHVMFPE-NVY-EPALKCAELLLDGVG--KGWASRVYFSDNGSTAI  455 (831)
T ss_dssp             EEEETTHHHHTCCCC-HHHHHHHHHHHHHHHHHHSSCCCTT-EEC-HHHHHHHHHHHHTTT--TTTCCEEEEESSHHHHH
T ss_pred             heeeecccHhhcCCC-CCCCHHHHHHHHHHHhhcccccccc-cCC-HHHHHHHHHHHHhCC--CCCCCEEEECCChhHHH
Confidence            567776663222222 34 8999999999988732111111 111 233344444443222  12 46899999999999


Q ss_pred             HHHHHHhc-----CC-----------C-CeEEEcCCCCcchHHHHhhc-Cce---------------e------------
Q 014631          123 QVILTVLA-----RP-----------G-ANILLPKPGFPLYEANARHT-RLE---------------I------------  157 (421)
Q Consensus       123 ~~~~~~l~-----~~-----------g-d~Vl~~~p~y~~~~~~~~~~-g~~---------------~------------  157 (421)
                      ..+++...     +.           + .+|+..+.+|++....+... |..               +            
T Consensus       456 E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  535 (831)
T 4a0g_A          456 EIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNG  535 (831)
T ss_dssp             HHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETT
T ss_pred             HHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCC
Confidence            99988752     12           2 37888999998764443322 210               0            


Q ss_pred             -EeeeccCC------C--CccCC------------------HHHHHhhhc-------cCceEEEEeCC--CCCcccc-cC
Q 014631          158 -RHFDLLPE------K--GWEVD------------------LDGLEALAD-------ENTVAMVIVNP--GNPCGNV-FT  200 (421)
Q Consensus       158 -~~~~~~~~------~--~~~~d------------------~e~l~~~~~-------~~~~~i~~~~p--~nptG~~-~~  200 (421)
                       ..++.+..      +  .+. +                  .+.+++.+.       ....+.++..|  ++..|.. +|
T Consensus       536 ~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~  614 (831)
T 4a0g_A          536 SWNISLPESFSEIAPEYGTFT-SRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD  614 (831)
T ss_dssp             EEEEECCTTSCCCCSSTTEES-CHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred             ceEecCCcccccccccccccc-chhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence             01111100      0  000 1                  245666654       23445566677  5777876 57


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELR  279 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~  279 (421)
                      ++.+++|.++|++||+++|+||+++++.+.|..+ ....++...+++   +++|.++. | +++|+++++        ++
T Consensus       615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~--------~~  681 (831)
T 4a0g_A          615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLAT--------DA  681 (831)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEEC--------HH
T ss_pred             HHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEEC--------HH
Confidence            8889999999999999999999999988877654 333333333333   68999755 6 899999996        46


Q ss_pred             HHHHHhhh-------cccccCCchHHHHHHHHHhhccchh-HHHHHH---HHHHH-HHHHHHHHhhcCCCccccCCCCce
Q 014631          280 IVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKED-FFSKIV---DILRD-TADICYDRIKEIPCITCPRKPEGS  347 (421)
Q Consensus       280 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~---~~~~~-~~~~~~~~l~~~~g~~~~~~~~~~  347 (421)
                      +++.+...       ...+++.++++++++.++|+...++ ..++..   +++++ ..+.+.+.+.+.|.+..+ . ..|
T Consensus       682 i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~v-r-g~G  759 (831)
T 4a0g_A          682 VFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRV-V-VIG  759 (831)
T ss_dssp             HHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEE-E-EET
T ss_pred             HHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeE-e-ecc
Confidence            77766542       1234678899999988888642211 111111   11111 122344556666666533 3 335


Q ss_pred             eEEEEecCccccc-C--CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          348 MFVMVKLNLSLLE-G--ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       348 ~~~~~~~~~~~~~-~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      .+..+++...... .  ......+... +.++||++.|+     .+.+|++++  .++++|++++++|.++++++.
T Consensus       760 l~~~iel~~~~~~~~~~~~~a~~~~~~-l~e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l~  829 (831)
T 4a0g_A          760 TLFALELKADASNSGYASLYAKSLLIM-LREDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEFN  829 (831)
T ss_dssp             TEEEEEEC---------CHHHHHHHHH-HHHTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred             cEEEEEEecCccccccchHHHHHHHHH-HHHCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            6666776432100 0  0012344444 56789999885     378999965  899999999999999987653

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.80  E-value=6.4e-17  Score=149.53  Aligned_cols=333  Identities=14%  Similarity=0.058  Sum_probs=212.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCC----cEEEcCCHHHHHHHHHHHhc
Q 014631           61 RTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLA  130 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~----~i~~~~g~~~al~~~~~~l~  130 (421)
                      ...+.+.+++-..+.+....+      |+...-+.+++....+...+.||.  +..    +|- ..+|++|+..++.+|+
T Consensus        65 ~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a--~~A~w~VNVQ-P~SGs~AN~avy~All  141 (490)
T 3ou5_A           65 FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDL--DPAQWGVNVQ-PYSGSPANLAVYTALL  141 (490)
T ss_dssp             CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTC--CTTTEEEECC-CSSHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCC--CccccCCCCC-cCCHHHHHHHHHHHHc
Confidence            456888898887776633333      334444678888888888888873  343    333 3567788999999999


Q ss_pred             CCCCeEEEcCCCCcchHHHH--------hhcC--ceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCccccc
Q 014631          131 RPGANILLPKPGFPLYEANA--------RHTR--LEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVF  199 (421)
Q Consensus       131 ~~gd~Vl~~~p~y~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~  199 (421)
                      +|||+|+..+..+.++...-        ...|  .+...+++++++ ..+|.|++++.... ++++|+...-.+|-=   
T Consensus       142 ~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t-~~IDyd~~~~~A~~~kPklIi~G~SaY~r~---  217 (490)
T 3ou5_A          142 QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKT-GLIDYNQLALTARLFRPRLIIAGTSAYARL---  217 (490)
T ss_dssp             C-CCCEECBC----------------------------CBCEETTT-TEECHHHHHHHHHHHCCSEEEECCSSCCSC---
T ss_pred             CCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCC-CcccHHHHHHHHhhcCCCeEEECCccCccc---
Confidence            99999999988776553221        1122  245556666543 46999999986654 677665443344432   


Q ss_pred             CHHHHHHHHHHHHhcCcEEEEcccc-cccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH-
Q 014631          200 TYQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE-  277 (421)
Q Consensus       200 ~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~-  277 (421)
                        -+++++.++|++.|.++++|.+| ++++-+|..+.|+...  +   ++.+|.+|+  ++|.|.|.+++++....... 
T Consensus       218 --id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~A--D---vVTtTTHKT--LrGPrGG~Il~~~~~~~~~~k  288 (490)
T 3ou5_A          218 --IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA--D---IVTTTTHKT--LRGARSGLIFYRKGVKAVDPK  288 (490)
T ss_dssp             --CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC--S---EEEEESSST--TCSCSCEEEEEECSEEEECC-
T ss_pred             --cCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccc--e---EEecccccc--ccCCCceEEEecccccccccc
Confidence              23788888899999999999999 4455556555555432  2   778899999  58889999998753100000 


Q ss_pred             ------HHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631          278 ------LRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF  349 (421)
Q Consensus       278 ------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~  349 (421)
                            .++.+++......  .++|.....++.+.++.......+.+.+++..++...|.+.|.+. |+.++.....+..
T Consensus       289 ~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHl  367 (490)
T 3ou5_A          289 TGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL  367 (490)
T ss_dssp             -CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred             ccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceE
Confidence                  0245666555432  234444444444444544345677888999999999999999987 8886656666777


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-C----CCCeEEEEec------CCHHHHHHHHHHHHHHHH
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-G----MKNWLRITFA------IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-~----~~~~iRi~~~------~~~e~l~~~~~~l~~~~~  415 (421)
                      +++++.....     +...++.+|++.||.+.--..+ .    .++.|||...      ..++|++++.+.|.+++.
T Consensus       368 vLvDl~~~g~-----tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~  439 (490)
T 3ou5_A          368 VLVDLRPKGL-----DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             EEEECGGGTC-----CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEeccccCC-----CHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            8888765422     3445667789999998632221 1    2568999975      457899999999888774

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.80  E-value=1.2e-17  Score=154.95  Aligned_cols=312  Identities=11%  Similarity=0.065  Sum_probs=196.7

Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC---C-CeEEEcCCCCcchHHHHhhcCceeEeeeccC-C
Q 014631           91 ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP---G-ANILLPKPGFPLYEANARHTRLEIRHFDLLP-E  165 (421)
Q Consensus        91 l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~---g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~  165 (421)
                      .+..+.+|+... |++. ....++++|+|.++..++.+.+++   | |+|+++..+|.+...++...|+++++++... +
T Consensus       118 tn~l~ld~L~~~-G~~~-~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~  195 (501)
T 3hl2_A          118 TNSLVLDIIKLA-GVHT-VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEG  195 (501)
T ss_dssp             HHHHHHHHHHHT-TCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEET
T ss_pred             HHHHHHHHHHHc-CCCC-CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecc
Confidence            344555666554 6552 345889999997777777666553   4 9999999999999999999999999987532 2


Q ss_pred             CCccCCHHHHHhhhcc---CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-cccccc
Q 014631          166 KGWEVDLDGLEALADE---NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVF  240 (421)
Q Consensus       166 ~~~~~d~e~l~~~~~~---~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~  240 (421)
                      +..++|++++++++++   +..+++++.+ .|..+.+   +++++|+++|++||+++++|+||+......... .....+
T Consensus       196 ~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~  272 (501)
T 3hl2_A          196 DELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV  272 (501)
T ss_dssp             TEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhc
Confidence            3578999999998864   3344444444 4544455   679999999999999999999998743111111 011122


Q ss_pred             C-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          241 G-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       241 ~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      + .+   +++.|.+|.+..+ +..|.+..++       +++.+.+.....  +..+....+.+..++.....+++.+..+
T Consensus       273 GrAD---~vVqS~HK~llvp-IGG~ii~~~d-------~e~l~~~~~~yP--Gr~S~Spsldl~~tLL~lGr~Gy~~ll~  339 (501)
T 3hl2_A          273 GRID---AFVQSLDKNFMVP-VGGAIIAGFN-------DSFIQEISKMYP--GRASASPSLDVLITLLSLGSNGYKKLLK  339 (501)
T ss_dssp             SCCC---EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHHTSC--SCBCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCc---EEEecccccceee-cCceEEEeCC-------HHHHHHHHHhCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            2 22   6788999997554 3335555543       345565543322  1222222232222333334567788888


Q ss_pred             HHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCee----EEeCC--------
Q 014631          320 ILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI----VLPGM--------  384 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~----v~~g~--------  384 (421)
                      +..++.+++.+.|+++.   |-.++..|.+..-+-+.+........ .....+-.+|..++|.    |.+|.        
T Consensus       340 e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~-~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~  418 (501)
T 3hl2_A          340 ERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD-KAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYT  418 (501)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTS-CHHHHHHHHHHHTTCCSCEEECTTCCEEETTEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccccc-ccHHHHHHHHHhcCCCcceeecCCCceEECCee
Confidence            88888888888888742   33333345555445555543211111 2333444455555662    34454        


Q ss_pred             --CCCC------CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhcC
Q 014631          385 --AVGM------KNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQQ  421 (421)
Q Consensus       385 --~~~~------~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~~  421 (421)
                        .|+.      ..++-++.+  .+++|++.++.+|.+++.++++++
T Consensus       419 f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~  465 (501)
T 3hl2_A          419 FRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER  465 (501)
T ss_dssp             ESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred             ecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence              3433      357777665  899999999999999999987653

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.75  E-value=1.4e-16  Score=150.05  Aligned_cols=315  Identities=9%  Similarity=0.033  Sum_probs=187.9

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----CCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----PGANILLPKPGFPLYEANARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  163 (421)
                      ...+++.+..++.+..|.+ +....++++|+|.+...++....+    +++.|+++..+|.+...++...|+++++++..
T Consensus        96 ~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~  174 (450)
T 3bc8_A           96 LNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV  174 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred             HHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEee
Confidence            4467777777777766643 233458888888444444434333    37999999999999999999999999888653


Q ss_pred             C-CCCccCCHHHHHhhhcc---CceEEEEeCCC-CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631          164 P-EKGWEVDLDGLEALADE---NTVAMVIVNPG-NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG  238 (421)
Q Consensus       164 ~-~~~~~~d~e~l~~~~~~---~~~~i~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  238 (421)
                      + ++.+.+|++.+++++.+   +.+++++++|+ +.+|.+   +++++|+++|++||+++++|+||+......... +-.
T Consensus       175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l-~~~  250 (450)
T 3bc8_A          175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHL-IQQ  250 (450)
T ss_dssp             EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-HHH
T ss_pred             ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhhHhH-HHH
Confidence            2 33578999999998854   34566777774 556677   779999999999999999999998643211111 101


Q ss_pred             cc--CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHH
Q 014631          239 VF--GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSK  316 (421)
Q Consensus       239 ~~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  316 (421)
                      .+  +.-|  .++.|.+|++ ......+++.+++       ++..+++........+.++ ........+. ...+.+.+
T Consensus       251 a~~~~~AD--~~v~S~HK~l-~a~~~~~~l~~rd-------~~~~~~~~~~~~g~~s~Sp-sL~l~~~l~~-~G~~g~~~  318 (450)
T 3bc8_A          251 GARVGRID--AFVQSLDKNF-MVPVGGAIIAGFN-------EPFIQDISKMYPGRASASP-SLDVLITLLS-LGCSGYRK  318 (450)
T ss_dssp             HHHHSCCC--EEEEEHHHHH-SCCSSCEEEEESC-------HHHHHHHHHHSCSCBCSHH-HHHHHHHHHH-HHHHHHHH
T ss_pred             HhcccCCC--EEEECCccCC-CchhccEEEEecC-------HHHHHHHHHHhhcCCcccH-HHHHHHHHHH-HHHHHHHH
Confidence            12  1111  5677999995 4445567777653       2344444333211112222 2222222232 23455666


Q ss_pred             HHHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcC---eeEEe--------
Q 014631          317 IVDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES---VIVLP--------  382 (421)
Q Consensus       317 ~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g---v~v~~--------  382 (421)
                      ..++..++.+++.+.+++++   +..+...+..+.-..+.++........+...+...+ ...|   .-+.+        
T Consensus       319 ~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~~  397 (450)
T 3bc8_A          319 LLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVS  397 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEET
T ss_pred             HHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccchh
Confidence            66666777888888887766   766443332221122223211000001234444443 3334   22321        


Q ss_pred             CC---CC------CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631          383 GM---AV------GMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       383 g~---~~------~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~  420 (421)
                      |.   .|      ....++=+.++  .+++++++++++|++++++++++
T Consensus       398 ~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~  446 (450)
T 3bc8_A          398 GHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE  446 (450)
T ss_dssp             TEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            01   11      11345555444  89999999999999998877654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	421
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	2e-70
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	6e-67
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-63
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	1e-57
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	5e-51
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	2e-47
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	9e-43
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	2e-38
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	6e-37
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	1e-34
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	3e-33
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	2e-32
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-28
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	2e-28
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	3e-27
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	4e-27
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	6e-27
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	6e-27
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	8e-27
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	2e-26
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	1e-25
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	7e-25
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	9e-24
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	2e-21
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	7e-20
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	3e-11
d1fg7a_	354	c.67.1.1 (A:) Histidinol-phosphate aminotransferas	2e-10
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	3e-07
d1p3wa_	391	c.67.1.3 (A:) Cysteine desulfurase IscS {Escherich	1e-06
d1jf9a_	405	c.67.1.3 (A:) NifS-like protein/selenocysteine lya	0.003

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  225 bits (573), Expect = 2e-70
 Identities = 78/377 (20%), Positives = 162/377 (42%), Gaps = 20/377 (5%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           + +   +     G+P     F T     +A   A+   +   Y P+ G    R AIA  L
Sbjct: 26  KAEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQGKTR-YGPAAGEPRLREAIAQKL 80

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH 159
             +       D++ +T G KQ+I  ++  +  PG  +++P P +  Y    +        
Sbjct: 81  QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVI 140

Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
                E  ++V  + +       T  +V   P NP G V+T  +++ IA+ A + G+ V+
Sbjct: 141 LPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVL 200

Query: 220 SDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277
           SDE+Y+ + +    ++ +G          +     +K + + GWR+G+L    P      
Sbjct: 201 SDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP------ 254

Query: 278 LRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC 337
             +  + K   + +S   TF Q      ++N+ +D   +++    +      D +  +P 
Sbjct: 255 -LVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPG 312

Query: 338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA 397
           + CP KP+G+ ++   +     +     ++F  +L  +  V  +PG A G  + +R+++A
Sbjct: 313 LECP-KPDGAFYMFPSIA----KTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA 367

Query: 398 IEPSALEEGLGRIKAFC 414
            +   ++ G+ R++ F 
Sbjct: 368 TDLDTIKRGMERLEKFL 384

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  215 bits (549), Expect = 6e-67
 Identities = 75/374 (20%), Positives = 148/374 (39%), Gaps = 19/374 (5%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
                 ++ L  G+P     F T     +A   A+   +   Y+P  GI   R A+A+  
Sbjct: 27  RRQGVDLVALTAGEPD----FDTPEHVKEAARRALAQGKTK-YAPPAGIPELREALAEKF 81

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH 159
             E    ++P++  +T G  QA+  +   +  PG  +++  P +  Y    R     +  
Sbjct: 82  RRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVE 141

Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
            + LPE+G+  D + +       T A+V+ +P NP G V+  + L+ +A  A +    ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201

Query: 220 SDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
           SDE+Y+HL +    +    V       +T+   +K + + GWR+G+          + ++
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPE--HTLTVNGAAKAFAMTGWRIGYACGPK-----EVIK 254

Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339
            + S+      S               +     F     +  R   D+  + +  +    
Sbjct: 255 AMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKA 314

Query: 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE 399
              +P G+ +V++  +      I+ D   A +   E  V V+PG        +R+++A  
Sbjct: 315 V--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYATS 367

Query: 400 PSALEEGLGRIKAF 413
              L + L R    
Sbjct: 368 EENLRKALERFARV 381

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  206 bits (526), Expect = 2e-63
 Identities = 80/378 (21%), Positives = 153/378 (40%), Gaps = 21/378 (5%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
           + +I LG G+P     F T     +   +A+       Y P++G+L  R AIA+ L  + 
Sbjct: 25  KDVISLGIGEPD----FDTPQHIKEYAKEALDKGLTH-YGPNIGLLELREAIAEKLKKQN 79

Query: 104 PCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL 162
             +  P  ++ +  G  QA  + L+   + G  +L+P P F  Y         +      
Sbjct: 80  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139

Query: 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
             E  + +++D L+    + T A++I +P NP G V T + L++IA+   +  ++VISDE
Sbjct: 140 YEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDE 199

Query: 223 VYDHLTFGSTPYVRM-GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
           VY+H  +    +  +  + G     IT+   SK + + GWRLG++              +
Sbjct: 200 VYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQM 259

Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP 341
            +                          +  + +                 +        
Sbjct: 260 YNATCP--------VTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPT 311

Query: 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIE 399
            KP+G+ ++  ++     +      +F+  + KE  V V+PG A G   + ++RI++A  
Sbjct: 312 VKPKGAFYIFPRIR----DTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATA 367

Query: 400 PSALEEGLGRIKAFCQRH 417
              LEE + R++   +  
Sbjct: 368 YEKLEEAMDRMERVLKER 385

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  192 bits (487), Expect = 1e-57
 Identities = 101/378 (26%), Positives = 165/378 (43%), Gaps = 12/378 (3%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           E     +I L  GDP  F  F+      +A   A++      Y  S G+   R+AI +  
Sbjct: 26  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAIKEGHN-YYGDSEGLPELRKAIVERE 83

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH 159
             +    ++PDDV +TA   +A+Q+I   L  PG  IL+P P +P Y    +    +   
Sbjct: 84  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 143

Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
           +  + E+ W+ D+D +     + T A+ ++NP NP G ++  + L++I   A +  I VI
Sbjct: 144 YRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 203

Query: 220 SDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
             +    L      ++  G     VPVI +  +SK +   GWRLG++   DP   L E+R
Sbjct: 204 -SDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVR 262

Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339
                     I   P T  Q A          D+  + +  L++  D  Y R+ EIP I+
Sbjct: 263 EAIDR--LARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGIS 319

Query: 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA 397
              KP+G+ ++  K+ +       +D EF L +     V+ + G   G       R  F 
Sbjct: 320 TT-KPQGAFYIFPKIEVG---PWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 375

Query: 398 IEPSALEEGLGRIKAFCQ 415
                LEE + R + F +
Sbjct: 376 PPIEILEEAMDRFEKFMK 393

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  175 bits (444), Expect = 5e-51
 Identities = 43/400 (10%), Positives = 113/400 (28%), Gaps = 58/400 (14%)

Query: 43  PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPA--RRAIADYLN 100
                 +  GD      +      A AV+ +        ++P    +     + I +   
Sbjct: 55  QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHE 114

Query: 101 SELPCKLSPDDVYLTAGCKQAIQVILTVLAR--------PGANILLPKPGFPLYEANARH 152
                      +    G  Q I  ++  L+         P + ++   P +P++    ++
Sbjct: 115 VVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKY 174

Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
              +   +          +      +++      ++ +P NP G +              
Sbjct: 175 FDKKGYVWAG--------NAANYVNVSNPEQYIEMVTSPNNPEGLL-------------- 212

Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272
           +  ++     +YD + +         +       I L +MSK     G R GW +  D S
Sbjct: 213 RHAVIKGCKSIYDMVYYWPH---YTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDES 269

Query: 273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKE----------DFFSKIVDILR 322
                L  +         + G     Q    ++ K              D  +     LR
Sbjct: 270 VYNNLLNYMT------KNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLR 323

Query: 323 DTADICYDRIKEIPCITCPRKPEGSMFVMVKL------NLSLLEGISDDMEFALQLAKEE 376
           +        + +    +    P+       +       + + ++   ++ +   Q  +  
Sbjct: 324 ERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNG 383

Query: 377 SVIVLPGMAVGM-KNWLRITFAIEPSALEEGLGRIKAFCQ 415
            +    G+       ++R++        ++ +  +K   +
Sbjct: 384 RINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDMVK 423

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  165 bits (418), Expect = 2e-47
 Identities = 123/390 (31%), Positives = 196/390 (50%), Gaps = 13/390 (3%)

Query: 39  KENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98
               P+PII L  GDP+      T+      + +A+ S E + Y P+VG   AR A+A +
Sbjct: 25  PSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATW 84

Query: 99  LNS------ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
             +      EL   +  D+V L +G    I + +T +   G   L+P+PGFP YE   + 
Sbjct: 85  WRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKA 144

Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
             + +  ++  PE  WE DLD +  L D+ T  +++ NP NPCG+ F+ + ++ I   A 
Sbjct: 145 YGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAE 204

Query: 213 KLGIMVISDEVYDHLTFGSTP----YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268
           +L + + SDE+Y  + F        +  +  F +TVP + LG  +K  +VPGWRLGWL+ 
Sbjct: 205 ELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLY 264

Query: 269 SDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC 328
                       ++ +K    +  GP T VQ A+ +   NT ++   +IV  + ++A   
Sbjct: 265 --VDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYL 322

Query: 329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM 388
           Y+ I E   +     P G+M++M +++L     I  D+EF  +L +EE+V VLPG     
Sbjct: 323 YNHIGECIGLAPT-MPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHA 381

Query: 389 KNWLRITFAIEPSALEEGLGRIKAFCQRHA 418
             + R+T         E + RIKAFCQRHA
Sbjct: 382 PGFTRLTTTRPVEVYREAVERIKAFCQRHA 411

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score =  152 bits (383), Expect = 9e-43
 Identities = 87/371 (23%), Positives = 151/371 (40%), Gaps = 25/371 (6%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
             +I L  G+P     F T     +  V  ++  E   Y+   GI   R  IA  +    
Sbjct: 28  EDVINLTAGEPD----FPTPEPVVEEAVRFLQKGEVK-YTDPRGIYELREGIAKRIGERY 82

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163
              +SPD V +T G KQA+      L  PG  +++  P +  Y          +   +  
Sbjct: 83  KKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETF 142

Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223
             K ++  L+ +E L    T A++I +P NP G V+  + L+ +   A+K    +ISDEV
Sbjct: 143 MSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEV 202

Query: 224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
           YD L +       + V      ++ +   SK   + GWR+G+            +     
Sbjct: 203 YDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGY-----------LISSEKV 251

Query: 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343
                 I S   + +            E   S +V   ++  +   +R+K++        
Sbjct: 252 ATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVE-- 309

Query: 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSAL 403
           PEG+ ++  K+         DD++F  +L +E+ V ++PG A     ++R++FA     L
Sbjct: 310 PEGAFYLFFKVR-------GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERL 362

Query: 404 EEGLGRIKAFC 414
            E L RI+ F 
Sbjct: 363 TEALDRIEDFL 373

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score =  141 bits (355), Expect = 2e-38
 Identities = 69/359 (19%), Positives = 128/359 (35%), Gaps = 31/359 (8%)

Query: 82  YSPSVGILPARRAIADYLNS--ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139
           +    G+   ++A+ D++           P+ + LTAG   A +  +  LA PG  +L+P
Sbjct: 80  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIP 139

Query: 140 KPGFPLY-EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPG 192
            P +P +       T +EI         G+++    LE    E          +++ NP 
Sbjct: 140 TPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPS 199

Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV----------RMGVFGS 242
           NP G   T  +L  +       GI +ISDE+Y    F S  ++                 
Sbjct: 200 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 259

Query: 243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV 302
              V  + S+SK   +PG+R+G + ++D   +    ++        +     +       
Sbjct: 260 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-------SSFGLVSSQTQHLLS 312

Query: 303 PQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKL-NLSLLEG 361
             +        +                   +   I+C       +F  V + +L     
Sbjct: 313 AMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCL-NGNAGLFCWVDMRHLLRSNT 371

Query: 362 ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSA-LEEGLGRIKAFCQRH 417
              +ME   ++  E  + + PG +       W R+ FA  P   L+  + R+KAF   +
Sbjct: 372 FEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 430

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (344), Expect = 6e-37
 Identities = 70/398 (17%), Positives = 142/398 (35%), Gaps = 35/398 (8%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-AEFDCYSPSVGILPARRAIADYLNSE 102
             ++ LG G P     F     A +A   AV      + Y+ + G  P  + +A +    
Sbjct: 25  HDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 80

Query: 103 LPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFD 161
           L  ++ P   V +T G   A+      L   G  +++ +P F  YE              
Sbjct: 81  LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVS 140

Query: 162 LLP----------EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
           L P             W++D   L       T A+V+  P NP G VF+ ++L+ +A   
Sbjct: 141 LKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLC 200

Query: 212 RKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
           ++  ++ I+DEVY  + +    ++ +    G     +T+GS  K +   GW++GW++  D
Sbjct: 201 QQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD 260

Query: 271 PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD 330
                 +           +  +     V  +  +     ++     +           + 
Sbjct: 261 HI---MKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHM 317

Query: 331 RIKEIPCITCPRKPEGSMFVMVKL--------NLSLLEGISDDMEFALQLAKEESVIVLP 382
                     P  P+GS F++  +        +L        D  F   + K + ++ +P
Sbjct: 318 IRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIP 377

Query: 383 GMAVG-------MKNWLRITFAIEPSALEEGLGRIKAF 413
                         +++R  F  + + L+    +++ +
Sbjct: 378 VSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKW 415

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score =  130 bits (328), Expect = 1e-34
 Identities = 87/401 (21%), Positives = 149/401 (37%), Gaps = 31/401 (7%)

Query: 34  IKQNLKENDPRPIIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVGIL 89
           +++ LK  +   +I L  G   P  FP            V+ +         Y  + G  
Sbjct: 19  VRELLKLVETSDVISLAGGLPAPETFP----VETIKKIAVEVLEEHADKALQYGTTKGFT 74

Query: 90  PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN 149
           P R A+A ++       +S  ++   AG +QA+ +I  V   PG  I++  P +      
Sbjct: 75  PLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQA 134

Query: 150 ARHTRLEIRHFDLLPE----KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQ 205
            ++   E     L  +       E  L+ L        +   +    NP G   +  + +
Sbjct: 135 FKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRK 194

Query: 206 KIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265
           K+ E A +   +++ D  Y  L +   P   +  F     VI LG+ SK  + PG+R+GW
Sbjct: 195 KLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRIGW 253

Query: 266 LVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325
           +          E+                A                    KI++  +   
Sbjct: 254 VAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDE------HIPKIIEFYKPRR 307

Query: 326 DICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM 384
           D   + ++E +P      KPEG MFV V L     EGI  D +  ++ A  + V  +PG 
Sbjct: 308 DAMLEALEEYMPEGVEWTKPEGGMFVRVTLP----EGI--DTKLMMERAVAKGVAYVPGE 361

Query: 385 AVGM----KNWLRITFAIEPSA-LEEGLGRIKAFCQRHAKQ 420
           A  +    KN +R+ F   P   + EG+ R+    +   K+
Sbjct: 362 AFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMKR 402

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score =  127 bits (319), Expect = 3e-33
 Identities = 61/357 (17%), Positives = 117/357 (32%), Gaps = 29/357 (8%)

Query: 82  YSPSVGILPARRAIADYLNSE--LPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139
           +    G+   R+AIA ++        +  P+ V +  G   A + I+  LA PG   L+P
Sbjct: 79  FQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVP 138

Query: 140 KPGFPLYEA----NARHTRLEIRHFDLLPEKGWEVDLDGLEALA---DENTVAMVIVNPG 192
            P +P +            + I        K     +      A   +     +++ NP 
Sbjct: 139 SPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPS 198

Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP------- 245
           NP G       L+ +     +  I ++ DE+Y    F +  +V +               
Sbjct: 199 NPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKD 258

Query: 246 -VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQ 304
            V  + S+SK   +PG+R+G + + +   +    ++              A  +      
Sbjct: 259 LVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFV 318

Query: 305 IFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKL-NLSLLEGIS 363
                +                  +    E+  I C  K    +F  + L  L       
Sbjct: 319 DNFLRESAMR-------LGKRHKHFTNGLEVVGIKCL-KNNAGLFCWMDLRPLLRESTFD 370

Query: 364 DDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLGRIKAFCQRH 417
            +M     +  +  + V PG +       W R+ FA ++   ++  L RI+ F    
Sbjct: 371 SEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score =  125 bits (313), Expect = 2e-32
 Identities = 79/397 (19%), Positives = 150/397 (37%), Gaps = 33/397 (8%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVGILPARRAIADYLNSEL 103
            + LG G P     +     A +A+  A  S +     Y+   G     +A++   +  +
Sbjct: 28  PLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLV 83

Query: 104 PCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL 162
              ++P   V +T G  +A+   +      G  +++ +P F  YE   +      R   L
Sbjct: 84  DRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPL 143

Query: 163 LPEKG--------WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214
            P K         W +D + LEAL +E T  ++I  P NP G V    +L+ +A   +K 
Sbjct: 144 KPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW 203

Query: 215 GIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG 273
            ++ +SDEVY+H+ F    ++R+    G     IT+GS  K + + GW++GW    +   
Sbjct: 204 NVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALL 263

Query: 274 ILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333
              ++   + +                   +  K+ +  F S         A   Y    
Sbjct: 264 KNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISG---ELMAKRDYMASF 320

Query: 334 EIPCITCPRKPEGSMFVMV-------KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV 386
                  P  P+G  F++        K++L+       D  F   + K   +  +P  A 
Sbjct: 321 LAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAF 380

Query: 387 GM-------KNWLRITFAIEPSALEEGLGRIKAFCQR 416
                    ++++R  F  +   L++    ++ +   
Sbjct: 381 YSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 417

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  113 bits (284), Expect = 1e-28
 Identities = 59/381 (15%), Positives = 103/381 (27%), Gaps = 47/381 (12%)

Query: 41  NDPRP-IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-----CYSPSVGILPARRA 94
            DPR   + L  G    +           AV +A             Y P  G+   R A
Sbjct: 22  EDPRSDKVNLSIG---LYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHA 78

Query: 95  IADYLNSELPCKLSPDDVYLTAGCKQAIQV----ILTVLARPGANILLPKPGFPLYEANA 150
           IA  L       L    V        +  +           P + + +  P +  + A  
Sbjct: 79  IAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIF 138

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEAL---ADENTVAMVIVNPGNPCGNVFTYQQLQKI 207
                E+  +    E    V  + L A        ++ ++     NP G   T  Q   +
Sbjct: 139 AGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAV 198

Query: 208 AEKARKLGIMVISDEVYDHLTFGS--TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265
            E  +   ++   D  Y     G     Y    +  + +P +   S SK + + G R+G 
Sbjct: 199 IEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGG 258

Query: 266 LVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325
           L             +           S P  F    V  +  +  E   +  +  + +  
Sbjct: 259 LSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLND--EALKASWLAEVEEMR 316

Query: 326 DICYDR----IKEIPCITCPR-----KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376
                     +K +      R       +  MF    L                +L +E 
Sbjct: 317 TRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGL----------SAAQVDRLREEF 366

Query: 377 SVIVLPGMAVGMKNWLRITFA 397
            V ++           R+  A
Sbjct: 367 GVYLIAS--------GRMCVA 379

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score =  112 bits (281), Expect = 2e-28
 Identities = 87/389 (22%), Positives = 155/389 (39%), Gaps = 38/389 (9%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           +     I  L  G P      +T  V  + + +      +  YS S GI   R A A Y 
Sbjct: 24  KKRGVRIHHLNIGQPD----LKTPEVFFERIYENKPEVVY--YSHSAGIWELREAFASYY 77

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH 159
                  + P++V +T G  +AI     V+A PG  IL+ +P +  Y A A+   +++  
Sbjct: 78  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIP 137

Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
                E+G+ +    LE+  +E T  +V+ NP NP G V+   +++ + E A + G+ +I
Sbjct: 138 VTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLI 196

Query: 220 SDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
            DEVY  + F       + +    V VI   S+SK++   G R+G L+T +   I   ++
Sbjct: 197 VDEVYSEIVFRGEFASALSIESDKVVVID--SVSKKFSACGARVGCLITRNEELISHAMK 254

Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339
           +         +    +  +       F   +E +  +              +  E   + 
Sbjct: 255 LAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRER---------VETVLKKLEEHGLK 305

Query: 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE-----ESVIVLPGMAVGM-----K 389
              KP G+ ++  +L       + D  EFA  +  +     E+ +V P     +     K
Sbjct: 306 RFTKPSGAFYITAEL------PVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGK 359

Query: 390 NWLRITFAIEPSALEEGLGRI----KAFC 414
             +RI   +E   L   +  +    K FC
Sbjct: 360 KEIRIACVLEKDLLSRAIDVLMEGLKMFC 388

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score =  109 bits (272), Expect = 3e-27
 Identities = 90/373 (24%), Positives = 144/373 (38%), Gaps = 37/373 (9%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
            + LG G PS        P   +AV  A+     D Y+P  G+   R A+A+        
Sbjct: 27  AVNLGQGFPS----NPPPPFLLEAVRRAL--GRQDQYAPPAGLPALREALAEE------F 74

Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
            + P+ V +T+G  +A+ V+L  L  PG  +++ +P F +Y  +A     + R   L   
Sbjct: 75  AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLT 134

Query: 166 KGWEV-DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
                 DL  LE      T A+++  P NP G VF  ++L+ IA  AR   + +ISDEVY
Sbjct: 135 PEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVY 194

Query: 225 DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI 284
           D L +G  P             +       R    G+R+GW+V               + 
Sbjct: 195 DELYYGERPRRLREFAPERTFTVGSAGK--RLEATGYRVGWIVGPKEF------MPRLAG 246

Query: 285 KGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344
                  S P     G    +    +E F+  + +  R   D+    ++ +        P
Sbjct: 247 MRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGL--RVYVP 304

Query: 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEP 400
           EG+ F+M +L              A +L +E  V ++P  A  +    K+  R  F    
Sbjct: 305 EGTYFLMAEL----------PGWDAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTE 354

Query: 401 SALEEGLGRIKAF 413
             L   L R+   
Sbjct: 355 EELHLALERLGRV 367

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  109 bits (273), Expect = 4e-27
 Identities = 51/406 (12%), Positives = 105/406 (25%), Gaps = 51/406 (12%)

Query: 41  NDPRP-IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-----CYSPSVGILPARRA 94
            DP P  + LG G   A+      P     V    +    +      Y P +G+   R  
Sbjct: 26  EDPDPRKVNLGVG---AYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTC 82

Query: 95  IADYL---------NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL 145
            +               +    S           + +             + +  P +  
Sbjct: 83  ASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWEN 142

Query: 146 YEANARHTRLEIRHFDLL-PEKGWEVDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTY 201
           +         +          +   +DL G  +  +   E ++ ++     NP G   T 
Sbjct: 143 HNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTP 202

Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF---GSTVPVITLGSMSKRWIV 258
           +Q ++IA   ++  +    D  Y     G+       +         +    S SK + +
Sbjct: 203 EQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGL 262

Query: 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-----EDF 313
              R+G L             +    K      S P       V +   + +        
Sbjct: 263 YNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGN 322

Query: 314 FSKIVDILRDTADICYDRIKEIPCITCPR--KPEGSMFVMVKLNLSLLEGISDDMEFALQ 371
              + D +         R++ +           +  MF    L          + +    
Sbjct: 323 VKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL----------NPKQVEY 372

Query: 372 LAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQR 416
           L  ++ + +LP          RI    +    L+     I     +
Sbjct: 373 LINQKHIYLLPS--------GRINMCGLTTKNLDYVATSIHEAVTK 410

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score =  108 bits (269), Expect = 6e-27
 Identities = 63/375 (16%), Positives = 132/375 (35%), Gaps = 20/375 (5%)

Query: 46  IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
           ++P    D      F T P   +A+   +    F  YS          AIA + +++   
Sbjct: 1   LLPFTISDMD----FATAPCIIEALNQRLMHGVFG-YSRWKND-EFLAAIAHWFSTQHYT 54

Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH--FDLL 163
            +    V         +  ++   +  G  +++  P +  +       +  +     +  
Sbjct: 55  AIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQ 114

Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223
            +  +         LA      M++ +P NP G V+T  +L+ +A+   + G+ VISDE+
Sbjct: 115 ADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEI 174

Query: 224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283
           +  + +G  P++           +   S SK + +P     + +  + S     L  +  
Sbjct: 175 HMDMVWGEQPHIPWSNVARGDWALL-TSGSKSFNIPALTGAYGIIENSSSRDAYLSALKG 233

Query: 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343
             G  + S    T    A  Q        +   +   L+D      D++         + 
Sbjct: 234 RDGLSSPSVLALTAHIAAYQQG-----APWLDALRIYLKDNLTYIADKMNAAFPELNWQI 288

Query: 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPS 401
           P+ +    + L         DD      L ++E V ++PG   G   + ++R+      S
Sbjct: 289 PQSTYLAWLDLR----PLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRS 344

Query: 402 ALEEGLGRIKAFCQR 416
            LE+G+  +    + 
Sbjct: 345 KLEKGVAGLINAIRA 359

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  109 bits (272), Expect = 6e-27
 Identities = 57/408 (13%), Positives = 115/408 (28%), Gaps = 52/408 (12%)

Query: 42  DPRP-IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-----CYSPSVGILPARRAI 95
           D R   + LG G   A+      P    +V  A +    D      Y    G+       
Sbjct: 26  DQRATKVDLGIG---AYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNA 82

Query: 96  ADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA----RPGANILLPKPGFPLYEANAR 151
           A  +       L  D V           + ++        P   + L KP +  + A   
Sbjct: 83  AKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFE 142

Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENT---VAMVIVNPGNPCGNVFTYQQLQKIA 208
           +  L+   +     +   +DL+G      +     + ++     NP G   T +Q  +I 
Sbjct: 143 NQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIV 202

Query: 209 EKARKLGIMVISDEVYDHLTFGSTPYVR------MGVFGSTVPVITLGSMSKRWIVPGWR 262
           +       + + D  Y     G            +    +  PV    S +K   + G R
Sbjct: 203 DAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGER 262

Query: 263 LGWLVTSDPS----GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-----EDF 313
           +G    +         ++        K   +  S P  +    V ++ +  +        
Sbjct: 263 VGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKD 322

Query: 314 FSKIVDILRDTADICYDRIKEI--PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQ 371
              +   +        D + ++  P        +  MF    L            +   +
Sbjct: 323 MVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL----------TPQMVKR 372

Query: 372 LAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRHA 418
           L +  +V ++           R + A +    +E     I    + +A
Sbjct: 373 LEETHAVYLVAS--------GRASIAGLNQGNVEYVAKAIDEVVRFYA 412

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score =  108 bits (270), Expect = 8e-27
 Identities = 71/373 (19%), Positives = 117/373 (31%), Gaps = 23/373 (6%)

Query: 44  RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103
              I L  G P     F       + +   V       Y+P  G+   R AIA       
Sbjct: 26  HQAINLSQGFPD----FDGPRYLQERLAHHVAQGANQ-YAPMTGVQALREAIAQKTERLY 80

Query: 104 PCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163
             +   D                        + ++         A A      I     L
Sbjct: 81  GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMAL 140

Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223
               + VD     AL  E T  +++  P NP   V+       + +      I VISDEV
Sbjct: 141 QPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEV 200

Query: 224 YDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282
           Y+H+ F    +  +          + + S  K + + GW++G+ V   P        I  
Sbjct: 201 YEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP--------ISA 252

Query: 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342
            I+      +                 + + +  + D  R   DI  + + E      P 
Sbjct: 253 EIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILP- 311

Query: 343 KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAI 398
             EG+ F++V  +        DD+EF   L +E  V  +P             +R+ FA 
Sbjct: 312 -CEGTYFLLVDYS---AVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK 367

Query: 399 EPSALEEGLGRIK 411
           + S L     R++
Sbjct: 368 KESTLLAAAERLR 380

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  107 bits (268), Expect = 2e-26
 Identities = 53/360 (14%), Positives = 95/360 (26%), Gaps = 28/360 (7%)

Query: 42  DPRP-IIPLGHGD-PSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           D RP  I LG G                 A    + +     Y    GI    R   + L
Sbjct: 23  DERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELL 82

Query: 100 NSELPCKLSPDD----VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRL 155
             +    ++                 +             + +  P +P +++      L
Sbjct: 83  FGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL 142

Query: 156 EIRHFDLLPEKGWEV---DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
           E+R +     +   +    L      A    V +      NP G   T +Q Q +A+ + 
Sbjct: 143 EVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSV 202

Query: 213 KLGIMVISDEVYDHLTFGS--TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
           + G + + D  Y     G                 +I   S SK + +   R+G      
Sbjct: 203 EKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVA 262

Query: 271 PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDILRDTA 325
                 +              S P       V  I  N       E   + +   ++   
Sbjct: 263 ADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMR 322

Query: 326 DICYDRIKEIPCITCPR--KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383
            +  + ++E            +  MF    L            E  L+L +E  V  +  
Sbjct: 323 QLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT----------KEQVLRLREEFGVYAVAS 372

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score =  105 bits (261), Expect = 1e-25
 Identities = 58/387 (14%), Positives = 120/387 (31%), Gaps = 19/387 (4%)

Query: 34  IKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARR 93
           +  +        ++PL   D      F+  P   + +   +          +      ++
Sbjct: 21  LMYSQNPEVGNEVVPLSVADME----FKNPPELIEGLKKYLDETV---LGYTGPTEEYKK 73

Query: 94  AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL-LPKPGFPLYEANARH 152
            +  ++       +  D +  TAG   A+   +    +PG  ++ +    +P + A    
Sbjct: 74  TVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQ 133

Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG-NPCGNVFTYQQLQKIAEKA 211
            R  I    L  +  + +D   LE L+ +     ++     NP G V+   +LQKI +  
Sbjct: 134 ERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIV 193

Query: 212 RKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
            K  +M+ SDE++  L      +         +   T+   +         +G       
Sbjct: 194 LKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIK 253

Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331
           +  ++E     +            T    A    +K   +     I  I ++   +    
Sbjct: 254 NPDIRE---RFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFF 310

Query: 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--K 389
               P I  P   EG+    +           D       +  +  +    G   G    
Sbjct: 311 EVNHPEIKAP-LIEGTYLQWIDFR----ALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGI 365

Query: 390 NWLRITFAIEPSALEEGLGRIKAFCQR 416
            + RI  A   S ++E L R+    + 
Sbjct: 366 GFERINLAAPSSVIQESLERLNKALKD 392

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  103 bits (256), Expect = 7e-25
 Identities = 58/380 (15%), Positives = 101/380 (26%), Gaps = 44/380 (11%)

Query: 41  NDPRP-IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAI 95
            D     + LG G   A+      P   + V  A            Y P  G+    RA 
Sbjct: 24  RDTNSKKMNLGVG---AYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS 80

Query: 96  ADYLNSELPCKLSPDDVYLT-----AGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
           A+    E                   G  +     L    +   ++ LPKP +  +    
Sbjct: 81  AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIF 140

Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALA---DENTVAMVIVNPGNPCGNVFTYQQLQKI 207
           R   L+++ +     K   +D  G         E ++ ++     NP G     +Q +++
Sbjct: 141 RDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKEL 200

Query: 208 AEKARKLGIMVISDEVYDHLTFGSTPY---VRMGVFGSTVPVITLGSMSKRWIVPGWRLG 264
           A   +K  ++   D  Y     G                + V+   S +K   + G R G
Sbjct: 201 ASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAG 260

Query: 265 WLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-----EDFFSKIVD 319
                       +            + S P          I    +           + D
Sbjct: 261 AFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD 320

Query: 320 ILRDTADICYDRIKEI--PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
            +          +K+            +  MF    L            E   +L KE S
Sbjct: 321 RIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK----------PEQVERLTKEFS 370

Query: 378 VIVLPGMAVGMKNWLRITFA 397
           + +            RI+ A
Sbjct: 371 IYMTKD--------GRISVA 382

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  100 bits (248), Expect = 9e-24
 Identities = 52/374 (13%), Positives = 103/374 (27%), Gaps = 39/374 (10%)

Query: 42  DPRP-IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIA 96
           DPR   I LG G    +           AV  A +          Y+   G    ++A+ 
Sbjct: 23  DPRQGKIDLGVG---VYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMG 79

Query: 97  DYLNSELPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRL 155
           + +  +     +      +         + L  +A P   + +  P +P + +      L
Sbjct: 80  ELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGL 139

Query: 156 EIRHFDLLPE---KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
            ++ +              +    A A +  + ++     NP G   T  Q  +IA    
Sbjct: 140 PVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILE 199

Query: 213 KLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
           K G + + D  Y     G          +      V+   S SK + +   R G L+   
Sbjct: 200 KTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALC 259

Query: 271 PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDILRDTA 325
                +EL             S P       V  +    +           +   +    
Sbjct: 260 ADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLR 319

Query: 326 DICYDRIKEIPCITCPR--KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383
           +     ++++              MF  +              E   ++ +E  + ++  
Sbjct: 320 EQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT----------PEQVKRIKEEFGIYMVGD 369

Query: 384 MAVGMKNWLRITFA 397
                    RI  A
Sbjct: 370 --------SRINIA 375

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 93.7 bits (231), Expect = 2e-21
 Identities = 67/406 (16%), Positives = 137/406 (33%), Gaps = 30/406 (7%)

Query: 32  TIIKQNLKENDPRPIIPLGHG--DPSAFPCFRTTPVAADAVVDAVRSAEFDC--YSPSVG 87
           +II++ LK    +  I  G G  DP  FP        A+   + +         YS + G
Sbjct: 26  SIIREILKFAADKDAISFGGGVPDPETFP----RKELAEIAKEIIEKEYHYTLQYSTTEG 81

Query: 88  ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE 147
               ++ I   L          +D  +     Q    ++  L     +  +      L  
Sbjct: 82  DPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGA 141

Query: 148 ANARHTRLEIRHFDLLPEKGWEVDLDG-------LEALADENTVAMVIVNPGNPCGNVFT 200
            NA    L       L + G ++++               +     V+ N  NP G   +
Sbjct: 142 INAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTS 201

Query: 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260
            ++ + + E A K  + ++ D+ Y  L +       +   G    V+ L +   + + PG
Sbjct: 202 LEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLL-NTFSKVLAPG 260

Query: 261 WRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320
            R+G    +     ++++          + +       +           +         
Sbjct: 261 LRIGM--VAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRK 318

Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV 380
                +   +   +IP +    K EG +F+ + L     EG  D  E   + AK + V  
Sbjct: 319 RTVMLNALEEYFSDIPGVKWV-KSEGGLFIWLTLP----EGF-DTWEMF-EYAKRKKVFY 371

Query: 381 LPGMAVGM----KNWLRITFAIEPSA-LEEGLGRIKAFCQRHAKQQ 421
           +PG    +       +R++F + P   + EG+ R++     + K++
Sbjct: 372 VPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKEK 417

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 88.0 bits (217), Expect = 7e-20
 Identities = 55/380 (14%), Positives = 99/380 (26%), Gaps = 43/380 (11%)

Query: 25  LTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP 84
           L +  A  II + L E     +  L  G    F          +     + +        
Sbjct: 1   LRLEKARKIILEILNEKGRDALYDL-SGLSGGFL-------IDEKDKALLNTY----IGS 48

Query: 85  SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP-KPGF 143
           S            +L  +       D          AI   +  L        LP  PG 
Sbjct: 49  SYFAEKVNEYGLKHLGGD-----ENDKCVGFNRTSSAILATILALKPKKVIHYLPELPGH 103

Query: 144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203
           P  E + +    +    D          +  +    D++T+ ++  +  +    V   + 
Sbjct: 104 PSIERSCKIVNAKYFESD---------KVGEILNKIDKDTLVIITGSTMDL--KVIELEN 152

Query: 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263
            +K+   A+    +V  D+                  G+ + V +     K    P   L
Sbjct: 153 FKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTST---DKLMEGPRGGL 209

Query: 264 GWLVTSDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320
                     I  E               I      F    + + F+  K          
Sbjct: 210 LAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAK-----NFDLS 264

Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV 380
             +  +     I +   I   R P G +   V  + ++   I   +E    L K   +I 
Sbjct: 265 KIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTI--NIKKLIEIGFNLLKNYGIIT 322

Query: 381 LPGMAV-GMKNWLRITFAIE 399
           +    + G    LRI     
Sbjct: 323 ITVAGMPGASKSLRIDLTSR 342

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score = 62.1 bits (149), Expect = 3e-11
 Identities = 50/373 (13%), Positives = 112/373 (30%), Gaps = 42/373 (11%)

Query: 42  DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNS 101
            P  ++                     A++D +   E     P        +A+A +   
Sbjct: 20  SPDQLLDFSANINP----LGMPVSVKRALIDNLDCIE---RYPDADYFHLHQALARHHQ- 71

Query: 102 ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFD 161
                +    +    G  ++I  + + L       ++  PGF  Y      +  EIR + 
Sbjct: 72  -----VPASWILAGNGETESIFTVASGLKPR--RAMIVTPGFAEYGRALAQSGCEIRRWS 124

Query: 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221
           L    GW++    LEAL  +     +                             +++ +
Sbjct: 125 LREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDE 184

Query: 222 EVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
              D   F       +        +  L S++K + +PG RLG+LV SD + + +  R  
Sbjct: 185 AFID---FIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQ 241

Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP 341
                    +          +          +       LR+     Y  + ++P +T  
Sbjct: 242 MPWSVNALAA----------LAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTV- 290

Query: 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-- 397
             P  + +++++          +D++   +L   + +++            + R+     
Sbjct: 291 -YPGRANYLLLRCE-------REDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIRSA 341

Query: 398 IEPSALEEGLGRI 410
            +   L   L  +
Sbjct: 342 AQNERLLAALRNV 354

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Length = 354

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

 Score = 59.4 bits (142), Expect = 2e-10
 Identities = 48/342 (14%), Positives = 105/342 (30%), Gaps = 34/342 (9%)

Query: 73  AVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVIL-TVLAR 131
            +     + Y P           A Y        + P+ V ++ G  + I++++      
Sbjct: 44  QLTQQTLNRY-PECQPKAVIENYAQYAG------VKPEQVLVSRGADEGIELLIRAFCEP 96

Query: 132 PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191
               IL   P + +Y  +A    +E R    L     ++     +    +    + + +P
Sbjct: 97  GKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDK---LDGVKVVYVCSP 153

Query: 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGS 251
            NP G +   Q  + + E  R   I+V  +   +     S            +    L +
Sbjct: 154 NNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAI----LRT 209

Query: 252 MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKE 311
           +SK + + G R G+ + ++    L            +      +T V     Q       
Sbjct: 210 LSKAFALAGLRCGFTLANEEVINLLM---------KVIAPYPLSTPVADIAAQALSPQGI 260

Query: 312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQ 371
               + V  +    +     +KEIPC+        + +++ +                  
Sbjct: 261 VAMRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFK--------ASSAVFKS 311

Query: 372 LAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413
           L  +  ++        +   LRIT        +  +  ++A 
Sbjct: 312 LWDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRAE 352

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score = 49.4 bits (116), Expect = 3e-07
 Identities = 50/374 (13%), Positives = 114/374 (30%), Gaps = 54/374 (14%)

Query: 40  ENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99
           E + R    L   +      F       D V   + S                  I  YL
Sbjct: 15  ETEKRDKTYLALNENP----FPFPEDLVDEVFRRLNSDALR-IYYDSPDEELIEKILSYL 69

Query: 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRH 159
           +      LS ++V +  G  + I             ++L       +       R+  + 
Sbjct: 70  D---TDFLSKNNVSVGNGADEIIY-----------VMMLMFDRSVFFPPTYSCYRIFAKA 115

Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
                 +        +  +       + I NP NP G+VF  +++++I +       + +
Sbjct: 116 VGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGA---FVAL 172

Query: 220 SDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
            +  Y+        +++         +  + + SK + +   R+G++V S+         
Sbjct: 173 DEAYYEFHGESYVDFLKK-----YENLAVIRTFSKAFSLAAQRVGYVVASEK-------- 219

Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339
               I  Y  +           +         + F +    + +  +     ++E+    
Sbjct: 220 ---FIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRI 276

Query: 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE 399
                 G+ FV V +         ++ E  L+  + ++V V        +  +RIT   +
Sbjct: 277 TD--SRGN-FVFVFME-------KEEKERLLEHLRTKNVAV-----RSFREGVRITIG-K 320

Query: 400 PSALEEGLGRIKAF 413
               +  L  ++ F
Sbjct: 321 REENDMILRELEVF 334

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} Length = 391

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

 Score = 47.6 bits (112), Expect = 1e-06
 Identities = 40/243 (16%), Positives = 77/243 (31%), Gaps = 37/243 (15%)

Query: 62  TTPVAADAVVDAVRSA---EFDCYSPSVGILP-----------ARRAIADYLNSELPCKL 107
           TTPV    V + +      +    +P+                AR  IAD + ++     
Sbjct: 11  TTPVD-PRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGAD----- 64

Query: 108 SPDDVYLTAGCKQAIQVILT----VLARPGANILLPKPGFPLYEANARHTRLE-IRHFDL 162
            P ++  T+G  ++  + +        + G +I+  K          R    E      L
Sbjct: 65  -PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL 123

Query: 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKI---------AEKARK 213
            P++   +DL  LEA   ++T+ + I++  N  G V     + ++          +  + 
Sbjct: 124 APQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQS 183

Query: 214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG 273
           +G + I            + +   G  G     +         I      G       SG
Sbjct: 184 VGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPR--VRIEAQMHGGGHERGMRSG 241

Query: 274 ILQ 276
            L 
Sbjct: 242 TLP 244

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} Length = 405

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

 Score = 37.2 bits (85), Expect = 0.003
 Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 31/183 (16%)

Query: 62  TTPVAADAVVDAVRSAEFDCYS-PSVGILP-----------ARRAIADYLNSELPCKLSP 109
           +       V+DA        Y+    GI              R+  + ++N+      S 
Sbjct: 31  SAQKP-SQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SA 84

Query: 110 DDVYLTAGCKQAIQVILTVLAR----PGANILLPKPGFP----LYEANARHTRLEIRHFD 161
           +++    G  + I ++           G NI++ +         ++        E+R   
Sbjct: 85  EELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIP 144

Query: 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221
           L P+    + L+ L  L DE T  + I +  N  G   T   L ++   A + G  V+ D
Sbjct: 145 LNPD--GTLQLETLPTLFDEKTRLLAITHVSNVLG---TENPLAEMITLAHQHGAKVLVD 199

Query: 222 EVY 224
              
Sbjct: 200 GAQ 202

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	421
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	100.0
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.97
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.97
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.97
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.97
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.96
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.96
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.96
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.96
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.96
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.94
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.93
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.93
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.92
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.9
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.89
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.89
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.88
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.88
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.88
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.88
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.88
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.87
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.87
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.87
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.86
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.86
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.86
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.85
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.85
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.85
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.85
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.85
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.85
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.85
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.84
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.84
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.84
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.83
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.83
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.82
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.82
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.81
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.81
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.81
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.81
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.8
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.8
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.8
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.79
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.79
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.76
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.75
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.75
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.73
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.71
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.69
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.6
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.4
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.24
d1ofux_	119	Hypothetical protein PA3008 {Pseudomonas aeruginos	90.35

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=6.4e-59  Score=439.56  Aligned_cols=380  Identities=20%  Similarity=0.389  Sum_probs=331.1

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ++++.++++.+.++.+..++.  +..|.++|+|++|+|.    +++|+.+++++.+.++.+. +.|++..|.+++|++++
T Consensus         5 ~~~~~~~~s~~~~i~~~a~~~--~~~g~~vi~l~~G~p~----~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lR~aia   77 (388)
T d1j32a_           5 ARVESVSPSMTLIIDAKAKAM--KAEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQGK-TRYGPAAGEPRLREAIA   77 (388)
T ss_dssp             HHHHTSCCCSSTTTHHHHHHH--HTTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHH
T ss_pred             hHhhcCCcCHHHHHHHHHHHH--HHCCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHH
Confidence            456666677665555544432  2347899999999976    6889999999999988753 58999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      +++.+.+|..+++++|++|+|+++++..+++++++|||+|++++|+|.+|...+...|.+++.++...+++|.+|+++++
T Consensus        78 ~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~  157 (388)
T d1j32a_          78 QKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIR  157 (388)
T ss_dssp             HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHH
T ss_pred             HHHHHhcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999888888999999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSK  254 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK  254 (421)
                      +.++++++++++++||||||.+++.+++++|+++|+++|++||+||+|..+.+++....++.....  .+++++++||||
T Consensus       158 ~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK  237 (388)
T d1j32a_         158 QAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAK  237 (388)
T ss_dssp             HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTT
T ss_pred             HhCCCCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChh
Confidence            999999999999999999999999999999999999999999999999999988776666555432  357899999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .|+++|+|+||++++        +++++.+..... ...+++...|.++...+.. .+.++++.++.++++++.+.+.|+
T Consensus       238 ~~~~~GlRvG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~  308 (388)
T d1j32a_         238 TYAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN-SQDCVQEMLAAFAERRRYMLDALN  308 (388)
T ss_dssp             TTTCTTTCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcchhHeEEEEEC--------HHHHHHHHHhhhhccccccHHHHHHHhhcccc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999986        356666655543 3457788888888888764 467899999999999999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      +++|+. +..|++|+|+|++++...    .++.+++.++++++||.+.||..|+.++++|+|++.+++++++++++|+++
T Consensus       309 ~~~g~~-~~~p~gg~~l~~~l~~~~----~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~e~l~~al~rl~~~  383 (388)
T d1j32a_         309 AMPGLE-CPKPDGAFYMFPSIAKTG----RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKF  383 (388)
T ss_dssp             TCTTCB-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHH
T ss_pred             hCCCCE-ecCCCceEEEEEECCCCC----CCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEeCCHHHHHHHHHHHHHH
Confidence            988988 558999999999987542    257788899999999999999999999999999999999999999999999


Q ss_pred             HHHh
Q 014631          414 CQRH  417 (421)
Q Consensus       414 ~~~~  417 (421)
                      ++.+
T Consensus       384 l~~l  387 (388)
T d1j32a_         384 LHGI  387 (388)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9875

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-57  Score=429.93  Aligned_cols=374  Identities=21%  Similarity=0.385  Sum_probs=320.1

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      ..+++++++.++++.+..++..  ..|.++|+|++|+|+    +++|+.+++++.+.+.++. .+|+++.|+++||++++
T Consensus         6 ~r~~~~~~s~~~~i~~~a~~~~--~~G~~vi~l~~g~p~----~~~p~~i~~a~~~~~~~~~-~~Y~~~~G~~~lR~~ia   78 (382)
T d1b5pa_           6 RRVQAMKPSATVAVNAKALELR--RQGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPELREALA   78 (382)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHH--HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHH
T ss_pred             HHHHhCCCCHHHHHHHHHHHHH--hCCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCCCCHHHHHHHH
Confidence            5677888899999887766522  348899999999976    6889999999999988754 58999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      +++.+.+|..+++++|++|+|+++++..++++++++||.|++++|+|.++...++..|.+++.++..+++++.+|+++++
T Consensus        79 ~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  158 (382)
T d1b5pa_          79 EKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVR  158 (382)
T ss_dssp             HHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHH
T ss_pred             hhhhhhcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999888888999999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      +.+.++++++++++||||||.+++.+++++|+++|++||++||+||+|+++.+++....+...  ..+++++++||||.|
T Consensus       159 ~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK~~  236 (382)
T d1b5pa_         159 RAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVNGAAKAF  236 (382)
T ss_dssp             TTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEEESTTTT
T ss_pred             HhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHc--CCCCEEEEecchhhc
Confidence            999989999999999999999999999999999999999999999999999988876555433  346899999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHHHhh
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNT--KEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      +++|+|+||++++        +++++.+..... ...+++.+.+.++...+...  ...+....++.++++++.+.+.+.
T Consensus       237 ~~~GlR~G~~~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  308 (382)
T d1b5pa_         237 AMTGWRIGYACGP--------KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLT  308 (382)
T ss_dssp             TCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcHhheEEEEEC--------HHHHHHHHHHHHhcccCcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHh
Confidence            9999999999986        356666655543 34566777777776666542  245667778888999999999988


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF  413 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~  413 (421)
                      +. |+. +..|++|+|+|++++...    .+...+. +++.++||.+.||..|+..+++|+|++.++|++++++++|+++
T Consensus       309 ~~-g~~-~~~p~gg~~~~~~~~~~~----~~~~~~~-~~l~e~gV~v~PG~~F~~~~~iRis~~~~~e~l~~al~rl~~~  381 (382)
T d1b5pa_         309 AL-GLK-AVRPSGAFYVLMDTSPIA----PDEVRAA-ERLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARV  381 (382)
T ss_dssp             HH-TCC-BCCCSBTTEEEEECTTTC----SSHHHHH-HHHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred             hc-CCe-EecCCceEEEeEeCCCCC----CCHHHHH-HHHHHCCEEEEeCcccCCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence            76 777 558999999999986431    1344444 4557789999999999999999999999999999999999876


Q ss_pred             H
Q 014631          414 C  414 (421)
Q Consensus       414 ~  414 (421)
                      +
T Consensus       382 L  382 (382)
T d1b5pa_         382 L  382 (382)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.7e-57  Score=432.49  Aligned_cols=395  Identities=32%  Similarity=0.573  Sum_probs=332.9

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD   97 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~   97 (421)
                      ++..+.-+++|.+.+.++.   ...+.++|+|++|+|+..+..+.++.+.+++.+.++....++|++..|+++||+++|+
T Consensus         7 ~~~~~~~~pir~~~~~~~~---~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~   83 (412)
T d1bw0a_           7 NHAGLVFNPIRTVSDNAKP---SPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVAT   83 (412)
T ss_dssp             HHHHTCCCHHHHHHHTCCC---CCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHH
T ss_pred             hcccCCccHHHHHHHhcCC---CCCCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHH
Confidence            4455666788888765432   1235689999999998766667788999999998887767789999999999999999


Q ss_pred             HHhhhCC------CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631           98 YLNSELP------CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD  171 (421)
Q Consensus        98 ~l~~~~~------~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d  171 (421)
                      |++++++      .++++++|++|+|+++++..++++++++||+|++++|+|..|...++..|++++.++++++++|..+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~  163 (412)
T d1bw0a_          84 WWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEAD  163 (412)
T ss_dssp             HHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEEC
T ss_pred             HHHHhcCcccccCCCCCCCeEEEecccccchhhhhhhhhccccceeeeeccchhhhhhhhccCccccccccccccccchh
Confidence            9988753      4578899999999999999999999999999999999999999999999999999999888889999


Q ss_pred             HHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc----ccCCCCCEE
Q 014631          172 LDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG----VFGSTVPVI  247 (421)
Q Consensus       172 ~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~----~~~~~~~~i  247 (421)
                      ++++++...++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++....+..    ..+...+++
T Consensus       164 ~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (412)
T d1bw0a_         164 LDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRV  243 (412)
T ss_dssp             HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEE
T ss_pred             hHHHHhhhhccccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccc
Confidence            9999999988999999999999999999999999999999999999999999999998876543322    223345688


Q ss_pred             EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631          248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI  327 (421)
Q Consensus       248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  327 (421)
                      +++|+||.|+++|+|+||++++++....  ..++...........+++...+.++...+....+.++.+.+++++++++.
T Consensus       244 ~~~s~SK~~~~~G~RvG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  321 (412)
T d1bw0a_         244 ILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMY  321 (412)
T ss_dssp             EEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred             cccccCccCccCCCCcccccccchhhcc--hhhhhhhccccccccCCchhhhhhcccccccccccccccccchhHHHHHH
Confidence            8999999999999999999997643221  33444444444434456666666666665545578899999999999999


Q ss_pred             HHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHH
Q 014631          328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGL  407 (421)
Q Consensus       328 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~  407 (421)
                      +.+.|.+.+|+. +..|++|+|+|++++.....+..++.+++.++++++||.+.||+.|+.++++|||++.+++++++++
T Consensus       322 ~~~~l~~~~g~~-~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~e~l~eal  400 (412)
T d1bw0a_         322 LYNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAV  400 (412)
T ss_dssp             HHHHHTTSTTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHH
T ss_pred             HHHHHHHhcCce-ecCCCCceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcCCHHHHHHHH
Confidence            999999887988 5589999999999986555455578899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 014631          408 GRIKAFCQRHA  418 (421)
Q Consensus       408 ~~l~~~~~~~~  418 (421)
                      ++|+++++++.
T Consensus       401 ~Rl~~~l~~~~  411 (412)
T d1bw0a_         401 ERIKAFCQRHA  411 (412)
T ss_dssp             HHHHHHHHHHB
T ss_pred             HHHHHHHHhcC
Confidence            99999998875

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=5.2e-57  Score=427.50  Aligned_cols=377  Identities=24%  Similarity=0.447  Sum_probs=325.9

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      .+++.+++++||+++.....      .+++|+|+.|+|+    +++|+.+++++.+.++++ ..+|++..|+++||++++
T Consensus         4 ~~~~~~~~s~ir~~~~~~~~------~~dvi~l~~g~p~----~~~p~~v~~~~~~a~~~~-~~~Y~~~~G~~~lr~aia   72 (388)
T d1gdea_           4 DRLELVSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIA   72 (388)
T ss_dssp             HHHHHSCCCHHHHHHHHHHH------CTTCEECCCCSCC----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred             hhhhhCCccHHHHHHHHHhC------CCCeEECCCCCCC----CCCCHHHHHHHHHHHhcC-ccCCCCCcCCHHHHHHHH
Confidence            46777788999999987664      5789999999976    688999999999998875 458999999999999999


Q ss_pred             HHHhhhCCC-CCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631           97 DYLNSELPC-KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus        97 ~~l~~~~~~-~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +|++...+. ...+++|++|+|+++++..++.++++|||+|++++|+|.++...++..|.+++.++.+.+++|++|++++
T Consensus        73 ~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  152 (388)
T d1gdea_          73 EKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDEL  152 (388)
T ss_dssp             HHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHH
T ss_pred             HHHHhhccccCCChheeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHH
Confidence            999875554 3456789999999999999999999999999999999999999999999999999998888899999999


Q ss_pred             HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccc
Q 014631          176 EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSK  254 (421)
Q Consensus       176 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK  254 (421)
                      ++.+.++++++++++||||||.+++.+++++|+++|++||++||+||+|+++.+.+....++..++. .+++++++||||
T Consensus       153 ~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  232 (388)
T d1gdea_         153 KKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSK  232 (388)
T ss_dssp             HHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTT
T ss_pred             HHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChh
Confidence            9999989999999999999999999999999999999999999999999999888777666666554 468999999999


Q ss_pred             ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHh
Q 014631          255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l  332 (421)
                      .|+++|+|+||++++        +++.+.+..... ...+++.+.|.++..++.... ..++...++.+++++..+.+.|
T Consensus       233 ~~~~~GlR~G~ii~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  304 (388)
T d1gdea_         233 TFAMTGWRLGFVAAP--------SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRL  304 (388)
T ss_dssp             TTTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCccccEEEEEee--------ccchhhhhhccccccccccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhh
Confidence            999999999999986        356666655543 345777888888888887532 4556777888889999999999


Q ss_pred             hcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHH
Q 014631          333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRI  410 (421)
Q Consensus       333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l  410 (421)
                      .+. ++. ...|++|+|+|++++...    .++.+++..+++++||.+.||..|+.  ++++|+|++.++|++++++++|
T Consensus       305 ~~~-~~~-~~~p~gg~fl~~~l~~~~----~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~~~e~l~~al~rL  378 (388)
T d1gdea_         305 NEM-GLP-TVKPKGAFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRM  378 (388)
T ss_dssp             HHT-TCC-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHH
T ss_pred             hhc-ccc-ccCCCceEEEEEECCCCC----CCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEecCCHHHHHHHHHHH
Confidence            876 666 448999999999987532    25788888888999999999999876  6799999999999999999999


Q ss_pred             HHHHHHhh
Q 014631          411 KAFCQRHA  418 (421)
Q Consensus       411 ~~~~~~~~  418 (421)
                      ++++++++
T Consensus       379 ~~~l~e~k  386 (388)
T d1gdea_         379 ERVLKERK  386 (388)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhcC
Confidence            99998864

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=1.4e-56  Score=424.45  Aligned_cols=387  Identities=27%  Similarity=0.496  Sum_probs=323.5

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      .++..+ ...||.+....++ + +..|.++|+|+.|+|.. ..+++|+.+++++.+.++.+ .+.|++..|+++||++++
T Consensus         6 ~r~~~~-~~~ir~i~~~a~~-l-~~~G~~vi~l~~G~P~~-~df~~p~~i~~a~~~a~~~~-~~~Y~~~~G~~~LR~aia   80 (395)
T d1xi9a_           6 KRALSV-EYAIRDVVLPARE-L-EKKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIV   80 (395)
T ss_dssp             HHHHTC-CC-------CHHH-H-HHTTCCCEECCCCCGGG-TTCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred             hccccC-cHHHHHHHHHHHH-H-HHCCCCeEECCCCCCCC-CCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHH
Confidence            445555 3568887765543 2 23489999999999863 24789999999999999775 357999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      +++++++|..+++++|++|+|+++++.+++.++.++||+|++++|+|+.+...++..|++++.++...+++|.+|+++++
T Consensus        81 ~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~  160 (395)
T d1xi9a_          81 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR  160 (395)
T ss_dssp             HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred             HhhhhcccccccccccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999887888999999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      +.+.++++++++++||||||.+++.+++++|+++|++||++||.||+|.++.+++.... .......+++++++||||.|
T Consensus       161 ~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~  239 (395)
T d1xi9a_         161 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHIS-PGSLTKDVPVIVMNGLSKVY  239 (395)
T ss_dssp             HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCC-HHHHCSSSCEEEEEESTTTT
T ss_pred             HhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccccc-hhhcCCCCCEEEEeCcchhc
Confidence            99988999999999999999999999999999999999999999999999888765433 33445567899999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      +++|+|+||++++++....  ..+.+..........+++.+.|.++..++.. .+.++++.++.++++++.+.+.|++++
T Consensus       240 ~~~GlRvG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~  316 (395)
T d1xi9a_         240 FATGWRLGYMYFVDPENKL--SEVREAIDRLARIRLCPNTPAQFAAIAGLTG-PMDYLKEYMKKLKERRDYIYKRLNEIP  316 (395)
T ss_dssp             CCGGGCCEEEEEECTTCTT--HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHS-CCHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             ccchhhcEeeEecCHHHHH--HHHHHHHHHhhcCCCCcCHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999999887654332  1233333333333457788899998888874 467899999999999999999999987


Q ss_pred             CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                      ++. +..|++|+|+|++++...   ..++.+++.++++++||.+.||..|+.  .+++|||++.++|++++++++|++++
T Consensus       317 ~~~-~~~p~gg~~~~~~l~~~~---~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~e~l~eal~rl~~~l  392 (395)
T d1xi9a_         317 GIS-TTKPQGAFYIFPKIEVGP---WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFM  392 (395)
T ss_dssp             TEE-CCCCCBSSEECCEECSCS---CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             Cce-ecCCCeeEEEeEECCCCC---CCCHHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence            777 558999999999987532   125788899999999999999999976  67999999999999999999999998


Q ss_pred             HH
Q 014631          415 QR  416 (421)
Q Consensus       415 ~~  416 (421)
                      ++
T Consensus       393 ~e  394 (395)
T d1xi9a_         393 KE  394 (395)
T ss_dssp             HH
T ss_pred             hc
Confidence            75

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2e-53  Score=400.91  Aligned_cols=371  Identities=25%  Similarity=0.398  Sum_probs=315.3

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      +++.+++.+...++.+..++..  ..|.++|+|+.|+|+    +++|+.+++++.+.+..+. ..|++..|+++||++++
T Consensus         3 ~r~~~~~~~~~~~~~~~a~~~~--~~G~~vI~l~~G~p~----~~~p~~i~~~~~~~~~~~~-~~Y~~~~G~~~lR~aia   75 (375)
T d1o4sa_           3 RRISEIPISKTMELDAKAKALI--KKGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIA   75 (375)
T ss_dssp             HHHHHSCCCSSHHHHHHHHHHH--HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHH
T ss_pred             hhhhhCCCCHHHHHHHHHHHHH--HCCCCeEECCCcCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCcCCHHHHHHHH
Confidence            3455555555566555554333  248899999999976    6788999999999887754 58999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      ++++..++...++++|++|+|+++++..++++++++||.|++++|+|+.+...+...+.....++...++++.++.+.++
T Consensus        76 ~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (375)
T d1o4sa_          76 KRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVE  155 (375)
T ss_dssp             HHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHH
T ss_pred             hhhhhccccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998888888899999999


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      ....++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++.....+...+..+++++++|+||.|
T Consensus       156 ~~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~  235 (375)
T d1o4sa_         156 GLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSH  235 (375)
T ss_dssp             HTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTT
T ss_pred             HhhccCccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhc
Confidence            98888999999999999999999999999999999999999999999999988766655555556678999999999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      +++|+|+||+++++        ++.+.+..... .....+...+......++.    +.....+.++++++.+.+.|++.
T Consensus       236 ~l~G~R~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~r~~~~~~~l~~~  303 (375)
T d1o4sa_         236 SMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKALEV----DNSYMVQTFKERKNFVVERLKKM  303 (375)
T ss_dssp             TCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCccccccccccc--------cchhhhhhhhccccccccccchhhhhhhccc----chhhhHHHHHHHHHHHHHHHHhc
Confidence            99999999999863        45555555443 2335555666665555543    34455677888999999999987


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                       |+. +..|++|+|+|++++.       ++.+++.++++++||.+.||..|+.++++|||++.+++++++++++|+++++
T Consensus       304 -g~~-~~~p~gg~f~~~~~~~-------~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         304 -GVK-FVEPEGAFYLFFKVRG-------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN  374 (375)
T ss_dssp             -TCC-CCCCSBSSEEEEECSS-------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             -Cce-EecCCccEEEEEECCC-------CHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence             888 5589999999999974       4788899999999999999999999999999999999999999999999874

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=5.8e-53  Score=402.91  Aligned_cols=382  Identities=22%  Similarity=0.361  Sum_probs=320.6

Q ss_pred             CCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 014631           12 FQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGIL   89 (421)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~   89 (421)
                      |+.+ .++..++++..+++.+...       +.++|||+.|.|+    +++|+.+++++.+++...  ..++|++..|++
T Consensus         2 ~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~I~L~~G~Pd----~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~   69 (418)
T d2r5ea1           2 FDLP-KRYQGSTKSVWVEYIQLAA-------QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHP   69 (418)
T ss_dssp             CCCC-GGGTTCCCCHHHHHHHHHH-------HHCCEECSSSCCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCH
T ss_pred             Cchh-hhhcCCCCCHHHHHHHHhc-------CCCCEEccCCCCC----CCCCHHHHHHHHHHHhCCCccCcCCCCCCCCH
Confidence            3444 5677777777777776544       3578999999976    577899999999998764  245799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC--
Q 014631           90 PARRAIADYLNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK--  166 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~--  166 (421)
                      +||++||+|+++++|..+++ ++|++|+|+++++.+++++++++||.|++++|+|+++...+...|.+++.+++++++  
T Consensus        70 ~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  149 (418)
T d2r5ea1          70 RLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTG  149 (418)
T ss_dssp             HHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCS
T ss_pred             HHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEEEecccccc
Confidence            99999999999999988885 789999999999999999999999999999999999999999999999999886543  


Q ss_pred             ------CccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          167 ------GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       167 ------~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                            .+..+.+++.+...++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++....++..+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~  229 (418)
T d2r5ea1         150 GTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTL  229 (418)
T ss_dssp             SCEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred             cchhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCcccccccc
Confidence                  25678888888888889999999999999999999999999999999999999999999999887665555554


Q ss_pred             C-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc------cchh
Q 014631          241 G-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN------TKED  312 (421)
Q Consensus       241 ~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~------~~~~  312 (421)
                      . ..++++++.|+||.++++|+|+||++++        +++++.+..... ...+++.+.|.++...+..      ..+.
T Consensus       230 ~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~--------~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~  301 (418)
T d2r5ea1         230 PGMWERTITIGSAGKTFSLTGWKIGWAYGP--------EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPEC  301 (418)
T ss_dssp             TTTGGGEEEEEEHHHHTTCGGGCCEEEESC--------HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred             ccccceeeeeecCCccccCCCccccccccc--------chhhhhhhhcccccccccccchhhhccccccccccccccchh
Confidence            3 3568999999999999999999999986        357777766543 3456677778777665532      1256


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc-------ccCCCChHHHHHHHHhhcCeeEEeCCC
Q 014631          313 FFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-------LEGISDDMEFALQLAKEESVIVLPGMA  385 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~~g~~  385 (421)
                      ++.+.++.++.+++.+.+.|+++ |+. +..|++|+|+|++++...       .....++.+++.++++++||.+.||..
T Consensus       302 ~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~  379 (418)
T d2r5ea1         302 YFNSISGELMAKRDYMASFLAEV-GMN-PTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSA  379 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT-TCE-EEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGG
T ss_pred             hHHHHHHHHHHhhhhHHhhHhhc-CCc-ccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchh
Confidence            88899999999999999999998 888 558999999999986421       112235778899999999999999999


Q ss_pred             CCC-------CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631          386 VGM-------KNWLRITFAIEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       386 ~~~-------~~~iRi~~~~~~e~l~~~~~~l~~~~~  415 (421)
                      |+.       .+++|||++.++|+|++++++|++++.
T Consensus       380 F~~~~~~~~g~~~iRis~~~~~e~l~~a~~rl~~~lg  416 (418)
T d2r5ea1         380 FYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKG  416 (418)
T ss_dssp             GSCGGGHHHHTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             hCCCCCccCCCCEEEEEecCCHHHHHHHHHHHHHHHc
Confidence            865       378999999999999999999998864

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-52  Score=399.15  Aligned_cols=376  Identities=20%  Similarity=0.371  Sum_probs=317.5

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-EFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~l~~~ia   96 (421)
                      +++.++.++..+.....+       ++++|+|++|.|+    +++|+.+.+++.+++.++ ..++|++..|+++||++++
T Consensus         6 r~~~~~~~~~~~~~~~~~-------~~dvI~l~~G~p~----~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia   74 (418)
T d1w7la_           6 RLDGIDYNPWVEFVKLAS-------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILA   74 (418)
T ss_dssp             GGTTCCCCTHHHHHHHHH-------TSCCEECCCCSCS----SCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHHhC-------CCCCEECCCCCCC----CCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHH
Confidence            566666777777665443       7899999999976    678999999999998764 3457999999999999999


Q ss_pred             HHHhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC----------C
Q 014631           97 DYLNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP----------E  165 (421)
Q Consensus        97 ~~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~----------~  165 (421)
                      +++++++|..+++ ++|++|+|+++++..++++++++||.|++++|+|+.|...+...|++++.++..+          +
T Consensus        75 ~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  154 (418)
T d1w7la_          75 SFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSS  154 (418)
T ss_dssp             HHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEG
T ss_pred             HHHHHHhCCCCCcccceeeccCcHHHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccccc
Confidence            9999988988875 6899999999999999999999999999999999999999999999988887653          2


Q ss_pred             CCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CC
Q 014631          166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TV  244 (421)
Q Consensus       166 ~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~  244 (421)
                      +++.+|.+++.....+.++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .+
T Consensus       155 ~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~  234 (418)
T d1w7la_         155 SNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE  234 (418)
T ss_dssp             GGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred             cCcccchhhhhccccccccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHcccccc
Confidence            35667888888888888999999999999999999999999999999999999999999999998877766666644 46


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc------hhHHHHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK------EDFFSKI  317 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~------~~~~~~~  317 (421)
                      +++++.|+||.|++||+|+||++++        +++++.+..... ...+++.+.|.++..++....      ..++...
T Consensus       235 ~~i~~~S~SK~~~~pG~RvG~~v~~--------~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~  306 (418)
T d1w7la_         235 RTLTIGSAGKTFSATGWKVGWVLGP--------DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQF  306 (418)
T ss_dssp             GEEEEEEHHHHTTCGGGCCEEEECC--------HHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHH
T ss_pred             ccceecccCccccCCCCcccccccc--------hhhhhhhccccccccccccchhhHHHHHHhhhccccccccccccccc
Confidence            8999999999999999999999996        356777766653 345677888888877765321      4677888


Q ss_pred             HHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc--------cCCCChHHHHHHHHhhcCeeEEeCCCCCC-
Q 014631          318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--------EGISDDMEFALQLAKEESVIVLPGMAVGM-  388 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-  388 (421)
                      ++.++++++.+.+.|+++ |+. +..|++|+|+|++++....        .+...+.+++.++++++||.+.||+.|+. 
T Consensus       307 ~~~~~~~r~~l~~~L~~~-g~~-~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~  384 (418)
T d1w7la_         307 PQAMQRCRDHMIRSLQSV-GLK-PLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV  384 (418)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TCE-EEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCH
T ss_pred             hhhhhhhhhhhhhhhhhc-CCc-ccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCC
Confidence            999999999999999987 888 5589999999998864211        11123678899999999999999999864 


Q ss_pred             ------CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          389 ------KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       389 ------~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                            .+++|||++.+++++++++++|+++.
T Consensus       385 ~~~~~~~~~iRis~~~~~~~l~~a~~rl~~~~  416 (418)
T d1w7la_         385 PHQKHFDHYIRFCFVKDEATLQAMDEKLRKWK  416 (418)
T ss_dssp             HHHTTSCSEEEEECCCCHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEEEcCCHHHHHHHHHHHHHHh
Confidence                  47999999999999999999998764

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=8.3e-52  Score=391.80  Aligned_cols=359  Identities=18%  Similarity=0.264  Sum_probs=297.0

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.++|+|++|+|.    +|+|+.+++++.+.++.+. ++|+  .|.++||+++++|+++++|+.+++++|++|+|+++
T Consensus        28 ~~g~~vi~l~~g~pd----f~~p~~v~~al~~~~~~~~-~~Y~--~g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~  100 (394)
T d1c7na_          28 EVGNEVVPLSVADME----FKNPPELIEGLKKYLDETV-LGYT--GPTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVP  100 (394)
T ss_dssp             TCCTTCCCCCSSSCS----SCCCHHHHHHHHHHHHHCC-CSSB--CCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHH
T ss_pred             hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCC-cCCC--CCCHHHHHHHHHHHHHhcCCCCCCcceEeeccchh
Confidence            347899999999976    7999999999999998753 4674  46799999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC-CCCccCCHHHHHhhh-ccCceEEEEeCCCCCcccc
Q 014631          121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP-EKGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNV  198 (421)
Q Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~  198 (421)
                      ++.++++++++|||.|+++.|.|.++.......|...+.++... +..+.+|.+.++..+ .++++++++++||||||.+
T Consensus       101 al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPTG~v  180 (394)
T d1c7na_         101 AVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRV  180 (394)
T ss_dssp             HHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBC
T ss_pred             hhhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEeccccccccee
Confidence            99999999999999999999999999999999999888877543 344678888888766 4578999999999999999


Q ss_pred             cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC--CCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631          199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG--STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ  276 (421)
Q Consensus       199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  276 (421)
                      ++.+++++|+++|++||++||+||+|.++.+++....+.....  ..++++++.|+||.|+++|+|+||+++++      
T Consensus       181 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~------  254 (394)
T d1c7na_         181 WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN------  254 (394)
T ss_dssp             CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC------
T ss_pred             ccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccC------
Confidence            9999999999999999999999999999998876544433322  24578999999999999999999999974      


Q ss_pred             HHHHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEec
Q 014631          277 ELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKL  354 (421)
Q Consensus       277 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~  354 (421)
                       +.+.+.+....... .++....+.++........+.+.++..+.++++++.+.+.++. .+++. ...|++++|+|+++
T Consensus       255 -~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~p~g~~~~~~~~  332 (394)
T d1c7na_         255 -PDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDF  332 (394)
T ss_dssp             -HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEEC
T ss_pred             -hhhhhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhcccccee-ecCCCceeEEEEEC
Confidence             34666665554332 2333333333333333234678888888999999999988885 46777 45889999999998


Q ss_pred             CcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631          355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +...    .++.+++..|++++||.+.||+.|+.  .+++|+|++.++|+|++++++|++++++++
T Consensus       333 ~~~~----~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~eal~rl~~~l~~Lk  394 (394)
T d1c7na_         333 RALK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLK  394 (394)
T ss_dssp             GGGC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCC----CCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHHhcC
Confidence            7532    26788889998889999999999976  578999999999999999999999999874

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.9e-52  Score=391.12  Aligned_cols=375  Identities=23%  Similarity=0.353  Sum_probs=312.8

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      .++..+++++||++.+...+.  +.+|.++|+|+.|+|+    +++|+.+.+++.+...  ..+.|++..|.++||++++
T Consensus         3 ~r~~~~~~~~i~~l~~~a~~~--~~~g~~vi~l~~G~p~----~~~p~~~~~al~~~~~--~~~~Y~~~~G~~~LR~aia   74 (389)
T d2gb3a1           3 DRVLLTEESPIRKLVPFAEMA--KKRGVRIHHLNIGQPD----LKTPEVFFERIYENKP--EVVYYSHSAGIWELREAFA   74 (389)
T ss_dssp             HHHHSCCCCTTGGGHHHHHHH--HHTTCEEEECSSCCCC----SCCCTHHHHHHHHTCC--SSCCCCCTTCCHHHHHHHH
T ss_pred             hhhhcCCCCHHHHHHHHHHHH--HHcCCCEEECCCCCCC----CCCCHHHHHHHHhcCC--CCCCCCCCcCCHHHHHHHH
Confidence            456677788899988755432  2358899999999987    6788999999887543  3568999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE  176 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  176 (421)
                      +|+++++|+.+++++|++|+|+++++..++.+++++||.|++++|+|+.+...+...|...+.++.+.+. +..+.+.+.
T Consensus        75 ~~~~~~~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~  153 (389)
T d2gb3a1          75 SYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEE-GFAIPQNLE  153 (389)
T ss_dssp             HHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGG-TSCCCTTGG
T ss_pred             HHHHHhcCCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCcccccccccccc-ccchhhhhh
Confidence            9999999999999999999999999999999999999999999999999999999999999888875443 344556677


Q ss_pred             hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631          177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW  256 (421)
Q Consensus       177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  256 (421)
                      ....++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+.+.......  ...++++++.|+||.+
T Consensus       154 ~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~--~~~~~~~v~~s~sK~~  231 (389)
T d2gb3a1         154 SFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALS--IESDKVVVIDSVSKKF  231 (389)
T ss_dssp             GGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGG--SCCTTEEEEEESTTTT
T ss_pred             hhcccCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccc--cccccccccccccccc
Confidence            77778899999999999999999999999999999999999999999999988776443322  2345788899999999


Q ss_pred             CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      +++|+|+||+++++       +.+............+++.+.+.++..++.. .+.++++.++.++++++.+.+.|++++
T Consensus       232 ~~~GlRiG~~~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~  303 (389)
T d2gb3a1         232 SACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEHG  303 (389)
T ss_dssp             TCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCcccceeeeeccc-------hhHHHHHhhhhhccccccccccccccccccc-cchhcccccccccccchhhhhhhhhhc
Confidence            99999999999864       2344444444444456677778777777753 467889999999999999999999985


Q ss_pred             CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhh-----cCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE-----ESVIVLPGMAVGM-----KNWLRITFAIEPSALEEG  406 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~  406 (421)
                      +.. ...|++|+|+|++++..      ++.+++.+++++     +||.+.||+.|+.     .+++|||++.++++++++
T Consensus       304 ~~~-~~~p~~g~~~~~~lp~~------~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~~~l~~a  376 (389)
T d2gb3a1         304 LKR-FTKPSGAFYITAELPVE------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRA  376 (389)
T ss_dssp             CCC-BCCCSBSSEEEEECSSS------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHH
T ss_pred             ccc-ccCCCceEEEEEeCCCC------CHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEcCCHHHHHHH
Confidence            555 55899999999999743      577888888765     4788999998764     468999999999999999


Q ss_pred             HHHHHHHHHHh
Q 014631          407 LGRIKAFCQRH  417 (421)
Q Consensus       407 ~~~l~~~~~~~  417 (421)
                      +++|.++++++
T Consensus       377 ~~~L~~~lk~f  387 (389)
T d2gb3a1         377 IDVLMEGLKMF  387 (389)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=6.5e-51  Score=387.33  Aligned_cols=379  Identities=22%  Similarity=0.330  Sum_probs=308.3

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRA   94 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~   94 (421)
                      +..+.++.++||++.+...       ++++|+|+.|.|+.  ...+.+.+.+++.+.+...  ....|++..|+++||++
T Consensus         9 ~~~~~~~~s~ire~~~~~~-------~~~~i~l~~G~P~~--~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~a   79 (403)
T d1wsta1           9 EKAMLMKASEVRELLKLVE-------TSDVISLAGGLPAP--ETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLA   79 (403)
T ss_dssp             HHHHHCCCHHHHHHHHHHT-------SSSCEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHH
T ss_pred             HHHhcCCCcHHHHHHHHhC-------CCCcEECCCCCCCc--cccCHHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHH
Confidence            5677777899999887543       67899999999873  2334677888888877653  23579999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHH
Q 014631           95 IADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG  174 (421)
Q Consensus        95 ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~  174 (421)
                      +|+|+++++|.++++++|++|+|+++++..++.+++++||.|++++|+|..+...+...|.+++.++.+.+..+....+.
T Consensus        80 ia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~  159 (403)
T d1wsta1          80 LARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEE  159 (403)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHH
T ss_pred             HHHHHHHHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeecccCCccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999987654332222222


Q ss_pred             HH-h---hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          175 LE-A---LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       175 l~-~---~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                      .. .   ..++...++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++....++...+..+++++++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~  239 (403)
T d1wsta1         160 KLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLG  239 (403)
T ss_dssp             HHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEE
T ss_pred             cchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEc
Confidence            21 1   2233455677889999999999999999999999999999999999999999988877777777778999999


Q ss_pred             ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHH
Q 014631          251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADIC  328 (421)
Q Consensus       251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~  328 (421)
                      |+||.+ ++|+|+||++++        +++++.+..... ...+++...+.+....+.... +.++.+.++.++++++.+
T Consensus       240 S~SK~~-~~G~RiG~~i~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (403)
T d1wsta1         240 TFSKIL-APGFRIGWVAAH--------PHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAM  310 (403)
T ss_dssp             ESTTTT-CGGGCCEEEEEC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccee-cCcccccccccc--------hHHHHHHHHHHhhhccccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHH
Confidence            999997 599999999996        356666665543 345677777777777665433 567788889999999999


Q ss_pred             HHHhhcC--CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEec-CCHH
Q 014631          329 YDRIKEI--PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFA-IEPS  401 (421)
Q Consensus       329 ~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~-~~~e  401 (421)
                      .+.|.+.  .++. +..|.+|+|+|++++...     +...++. ++.++||.+.||+.|+.    ++++|++++ .+++
T Consensus       311 ~~~L~~~~~~~~~-~~~p~gg~~~~~~~~~~~-----~~~~~~~-~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~  383 (403)
T d1wsta1         311 LEALEEYMPEGVE-WTKPEGGMFVRVTLPEGI-----DTKLMME-RAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEE  383 (403)
T ss_dssp             HHHHHHHCCTTCE-ECCCSBSSEEEEECCTTC-----CTTTTHH-HHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCHH
T ss_pred             HHHHHhhccCCeE-EeCCCceeEEEEECCCCC-----CHHHHHH-HHHHCCEEEEechhhcCCCCCCCEEEEEecCCCHH
Confidence            9999864  3566 558999999999998632     3444444 55678999999998864    479999998 6899


Q ss_pred             HHHHHHHHHHHHHHHhhhc
Q 014631          402 ALEEGLGRIKAFCQRHAKQ  420 (421)
Q Consensus       402 ~l~~~~~~l~~~~~~~~~~  420 (421)
                      ++++++++|++++++..++
T Consensus       384 ~l~~al~rl~~~l~~~~k~  402 (403)
T d1wsta1         384 TIREGVRRLAETIKEEMKR  402 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            9999999999999988775

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-50  Score=380.69  Aligned_cols=350  Identities=23%  Similarity=0.372  Sum_probs=303.1

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQA  121 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a  121 (421)
                      ++++|||+.|.|.    +++|+.+++++.+.+.++ .++|++..|+++||+++|+|+++++|...+++ +|++|+|++++
T Consensus        25 ~~~~i~l~~G~Pd----~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~a   99 (382)
T d1u08a_          25 QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA   99 (382)
T ss_dssp             HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHH
T ss_pred             cCCCEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHH
Confidence            5789999999986    678899999999998874 46899999999999999999999999888876 59999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +.+++.+++++||.|++++|.|+.+.......|.....++.+ ++++.+|++++++...++++++++++||||||.+++.
T Consensus       100 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~~  178 (382)
T d1u08a_         100 LYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQ-PPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQ  178 (382)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECC-TTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHhhcccccceEEEecccccchhhhhhhccccceecccc-cccccCCHHHHhhhhccCccEEEECCCCccccccccc
Confidence            999999999999999999999999999999999888877764 5667789999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                      +++++|+++|++++++++.|++|..+.+.+......... ...+++|++.|+||.++++|+|+||++++        +++
T Consensus       179 ~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~--------~~~  250 (382)
T d1u08a_         179 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP--------API  250 (382)
T ss_dssp             HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC--------HHH
T ss_pred             ccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhcc--------chh
Confidence            999999999999999999999999988776544333222 23457899999999999999999999986        356


Q ss_pred             HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631          281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL  359 (421)
Q Consensus       281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  359 (421)
                      ++.+..... ...+++.+.|.++..+++. .+.++.+.++.++++++.+.+.+... |+. +..|++|+|+|++++... 
T Consensus       251 ~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~-~~~p~gg~~~~~~~~~~~-  326 (382)
T d1u08a_         251 SAEIRKVHQYLTFSVNTPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS-  326 (382)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC-
T ss_pred             HHHHHhhhccccccccccccccccccccc-chHHHHHHHHHHHhhhhhhhhhhccC-CcE-EecCCceEEEEEecCCCC-
Confidence            676666543 3467888999999999975 35788899999999999999998765 888 558999999999997532 


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                        ..++.+++.++++++||.+.||+.|+.    ++++|+|++.++|++++++++|++
T Consensus       327 --~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~~~e~l~~al~RL~~  381 (382)
T d1u08a_         327 --TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ  381 (382)
T ss_dssp             --CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred             --CCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHhC
Confidence              236888999999999999999999864    368999999899999999999875

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.9e-50  Score=375.62  Aligned_cols=354  Identities=19%  Similarity=0.300  Sum_probs=293.1

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHH
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVI  125 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~  125 (421)
                      +|.|++|+|+    ||+|+.+++++.+.+..+. .+|++..| +++|+++++++++++|..+++++|++|+|+++++..+
T Consensus         1 ~~~~~~~~~d----f~~p~~i~eal~~~~~~~~-~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~   74 (361)
T d1d2fa_           1 LLPFTISDMD----FATAPCIIEALNQRLMHGV-FGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL   74 (361)
T ss_dssp             CEECCSSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHH
T ss_pred             CcCcCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHH
Confidence            5899999976    7999999999999987754 47988887 7899999999999999999999999999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHHhhh-ccCceEEEEeCCCCCcccccCHHH
Q 014631          126 LTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTYQQ  203 (421)
Q Consensus       126 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~  203 (421)
                      +.+++++||+|++++|+|.++...++..|.+++.++.+.. +++.+|++.+++.+ +++++++++++||||||.+++.++
T Consensus        75 ~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~  154 (361)
T d1d2fa_          75 IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDE  154 (361)
T ss_dssp             HHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTH
T ss_pred             hhhccccccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhh
Confidence            9999999999999999999999999999999988887543 45678999999877 457889999999999999999999


Q ss_pred             HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631          204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS  283 (421)
Q Consensus       204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  283 (421)
                      +++|+++|+++|+++|+||+|.++.+++....++.... .++++++.|+||.|+++|+|+||++++.+.      .....
T Consensus       155 ~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~------~~~~~  227 (361)
T d1d2fa_         155 LEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA-RGDWALLTSGSKSFNIPALTGAYGIIENSS------SRDAY  227 (361)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTC-CSSEEEEECSHHHHTCGGGCCEEEEECSHH------HHHHH
T ss_pred             hhhhhhhhhhhheeeeeccccccccccccccccccccc-ccccccccccccccccccccceeeecchhH------HHHHH
Confidence            99999999999999999999999998876665655544 357888999999999999999999886421      11222


Q ss_pred             Hhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCccccc
Q 014631          284 IKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       284 ~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      +.....  ..++++...+.+....+.. ...+.++.+..++++++.+.+.+.+ .+++. +..|++|+|+|++++...  
T Consensus       228 ~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~p~gg~~~~~~l~~~~--  303 (361)
T d1d2fa_         228 LSALKGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRPLN--  303 (361)
T ss_dssp             HHHHHTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGGGC--
T ss_pred             hhhcccccccccchhhhHHHHHHHhhc-cchhhhcccccchhhHHHHHHHhhhhccccc-ccccCceeEEEEEccCCC--
Confidence            222221  1234555555554444442 3567788888888888888887764 46777 558999999999886432  


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~  418 (421)
                        .++.+++.+|++++||.+.||+.|+.  ++++|+|++.+++++++++++|.+++++++
T Consensus       304 --~~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis~~~~~e~l~~al~rl~~~l~~lr  361 (361)
T d1d2fa_         304 --IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR  361 (361)
T ss_dssp             --CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             --CCHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHHhcC
Confidence              26888999999999999999999975  568999999889999999999999998875

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.7e-50  Score=383.97  Aligned_cols=373  Identities=19%  Similarity=0.284  Sum_probs=300.1

Q ss_pred             hhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHH
Q 014631           21 ATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADY   98 (421)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~   98 (421)
                      .++++.||++++.       .+++++|+|+.|.|+.  ...+++.+.+++.+.++..  ....|++..|+++||++||+|
T Consensus        22 ~~~~s~ir~~~~~-------~~~~~~I~l~~G~Pd~--~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~   92 (420)
T d1vp4a_          22 NMKSSIIREILKF-------AADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKL   92 (420)
T ss_dssp             TCCCCCHHHHTTT-------TTSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHH
T ss_pred             hCCCcHHHHHHHH-------hCCCCcEecCCcCCCC--ccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHH
Confidence            3456788887653       2478999999999872  2234566777777777653  235899999999999999999


Q ss_pred             HhhhCCCC-CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631           99 LNSELPCK-LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus        99 l~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      +++++|.. +++++|++|+|+++++.+++.+++++||.|++++|+|..+...++..|++++.++.+++   +++++.++.
T Consensus        93 ~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~---~~~~~~l~~  169 (420)
T d1vp4a_          93 LERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVLER  169 (420)
T ss_dssp             HHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHH
T ss_pred             HHHHhCCCCCCHHHeEeccchhhhHHHHHHhhhccccccccccccccchhHHHHHHhhhccccccccc---ccccchhhh
Confidence            99998875 78999999999999999999999999999999999999999999999999999987543   467776654


Q ss_pred             hhc--------cC-ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          178 LAD--------EN-TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       178 ~~~--------~~-~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      .+.        .+ +.++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++....+....+..+++++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~  249 (420)
T d1vp4a_         170 KLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVL  249 (420)
T ss_dssp             HHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEE
T ss_pred             hhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeE
Confidence            321        12 344567899999999999999999999999999999999999999998876666666666778899


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHH
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTAD  326 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~  326 (421)
                      ++|+||.+ ++|+|+||++++        +++++.+.+.... ..+++...|.++..++.... ..++.+.++.++++++
T Consensus       250 ~~s~sk~~-~~G~RiG~~~~~--------~~~i~~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~  320 (420)
T d1vp4a_         250 LNTFSKVL-APGLRIGMVAGS--------KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRT  320 (420)
T ss_dssp             EEESTTTT-CGGGCEEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHH
T ss_pred             Eecccccc-cccccccccccc--------chhhhhhhhhhhhccccCchhhhhhhhhhcccccccccchhHHHHhhhhcc
Confidence            99999995 699999999986        4677777666543 45677788888777776533 4556667777777777


Q ss_pred             HHHHHhh----cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEec-
Q 014631          327 ICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFA-  397 (421)
Q Consensus       327 ~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~-  397 (421)
                      .+.+.|+    ++||+. +..|.+|+|+|++++...     ++.+++. +++++||.+.||+.|+.    .+++|+|++ 
T Consensus       321 ~~~~~L~~~~~~~~g~~-~~~p~gg~f~~~~~~~~~-----d~~~~~~-~l~~~gV~v~PG~~F~~~~~~~~~iRls~~~  393 (420)
T d1vp4a_         321 VMLNALEEYFSDIPGVK-WVKSEGGLFIWLTLPEGF-----DTWEMFE-YAKRKKVFYVPGRVFKVYDEPSPSMRLSFCL  393 (420)
T ss_dssp             HHHHHHHHHSTTSTTCE-ECCCSBSSEEEEECCTTC-----CTTTTHH-HHHHHTEECEEGGGGCTTCCCCSEEEEECSS
T ss_pred             cchhhhhhhhccCCCcE-EecCCceEEEEEECCCCC-----CHHHHHH-HHHHCCeEEEechhhCCCCCCCCEEEEEeCc
Confidence            7776665    457888 558999999999997531     4455554 45788999999999875    468999998 


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcC
Q 014631          398 IEPSALEEGLGRIKAFCQRHAKQQ  421 (421)
Q Consensus       398 ~~~e~l~~~~~~l~~~~~~~~~~~  421 (421)
                      .++|++++++++|+++++++.+++
T Consensus       394 ~~~e~l~~a~~rL~~~l~~~~~~~  417 (420)
T d1vp4a_         394 PPDEKIVEGIKRLREVVLEYGKEK  417 (420)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHhhHhh
Confidence            688999999999999999988764

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=2e-49  Score=379.48  Aligned_cols=378  Identities=20%  Similarity=0.336  Sum_probs=293.1

Q ss_pred             hhHHHHHHHHHHh-ccccC-CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHH
Q 014631           25 LTVRSALTIIKQN-LKEND-PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-----------AEFDCYSPSVGILPA   91 (421)
Q Consensus        25 ~~~~~~~~~~~~~-~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l   91 (421)
                      ++.......+.++ ++... ...+|+|+++...     ...+.+.+.+.+....           .....|+++.|.++|
T Consensus        15 s~y~~g~~~~~~~~~~~~~np~G~i~l~~~en~-----l~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~L   89 (431)
T d1m7ya_          15 SSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQ-----LCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAF   89 (431)
T ss_dssp             CHHHHHHHHHHHSBCCSSSCTTSBEECSSCCCC-----SCHHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHH
T ss_pred             CchhhhhhhhhcCCCCCcCCCCcEEEeeccccc-----ccHHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHH
Confidence            3454444444332 32322 3349999999744     2345555555432110           012369999999999


Q ss_pred             HHHHHHHHhhhCC--CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh-cCceeEeeeccCCCCc
Q 014631           92 RRAIADYLNSELP--CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH-TRLEIRHFDLLPEKGW  168 (421)
Q Consensus        92 ~~~ia~~l~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~  168 (421)
                      |+++|+|+++++|  +.+++++|++|+|+++++..++.++++|||+|++++|+|..+...+.. .|++++.++.+.+++|
T Consensus        90 R~aiA~~l~~~~~~~~~~~pe~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~  169 (431)
T d1m7ya_          90 KKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGF  169 (431)
T ss_dssp             HHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcc
Confidence            9999999999887  456789999999999999999999999999999999999998877764 5789999998888889


Q ss_pred             cCCHHHHHhhhc------cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-
Q 014631          169 EVDLDGLEALAD------ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-  241 (421)
Q Consensus       169 ~~d~e~l~~~~~------~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-  241 (421)
                      .+|++.+++.+.      .+++++++++||||||.+++.+++++|+++|++||++||+||+|+.+.|++..+.++..+. 
T Consensus       170 ~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~  249 (431)
T d1m7ya_         170 QITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLK  249 (431)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTT
T ss_pred             cccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhh
Confidence            999999887663      2567899999999999999999999999999999999999999999998877655543322 


Q ss_pred             ---------CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--
Q 014631          242 ---------STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--  310 (421)
Q Consensus       242 ---------~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--  310 (421)
                               ..++++++.|+||.|+++|+|+||+++++        +++.............+...+.++.+.+....  
T Consensus       250 ~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~  321 (431)
T d1m7ya_         250 DRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSND--------DMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLT  321 (431)
T ss_dssp             TTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESC--------HHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHH
T ss_pred             hcccccccccCceEEEEecCcccccCCCCccceeccch--------hhhHHHHHHHhccccccccccchhhhhhccchhh
Confidence                     13578999999999999999999999864        23333333333334556666666666654322  


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC-CCChHHHHHHHHhhcCeeEEeCCCCCC-
Q 014631          311 EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG-ISDDMEFALQLAKEESVIVLPGMAVGM-  388 (421)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~~~~-  388 (421)
                      ..++.+.+++++++++.+.+.|++. |+. +..|.+|+|+|++++...... ..++.+++.++++++||.+.||+.|+. 
T Consensus       322 ~~~~~~~~~~~~~~~~~l~~~L~~~-gi~-~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~  399 (431)
T d1m7ya_         322 KNYIAENHKRLKQRQKKLVSGLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCT  399 (431)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCS
T ss_pred             hhhhhhhhhhhhhhhhhhhhhhhcC-CcE-EecCCceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEeccccCCC
Confidence            4678888999999999999999885 888 558999999999987532111 113457888888999999999999876 


Q ss_pred             -CCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631          389 -KNWLRITFA-IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       389 -~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~  417 (421)
                       ++++|+|++ .+++++++++++|+++++++
T Consensus       400 ~~~~~Ri~~a~~~e~~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         400 EPGWFRVCFANLPERTLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             STTEEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCcCCHHHHHHHHHHHHHHHHHh
Confidence             679999998 57889999999999999886

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=1.8e-48  Score=372.57  Aligned_cols=360  Identities=19%  Similarity=0.359  Sum_probs=286.9

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----------CCCCCCCCCCCHHHHHHHHHHHhhhCCC--CCCCC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----------EFDCYSPSVGILPARRAIADYLNSELPC--KLSPD  110 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----------~~~~y~~~~g~~~l~~~ia~~l~~~~~~--~~~~~  110 (421)
                      ...+|+|+++...     ...+.+.+.+.+.....          ....|++..|.++||++||+|+++++|.  .++++
T Consensus        35 p~G~i~l~~aen~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e  109 (428)
T d1iaya_          35 PNGVIQMGLAENQ-----LCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE  109 (428)
T ss_dssp             TTSBEECSSCCCC-----SSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT
T ss_pred             CCceEEeecccCc-----cchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChh
Confidence            3569999999743     34455555554432211          1236999999999999999999998874  46789


Q ss_pred             cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCCccCCHHHHHhhh------ccCc
Q 014631          111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALA------DENT  183 (421)
Q Consensus       111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~~------~~~~  183 (421)
                      +|++|+|+++++..++.+++++||.|++++|+|.++...+. ..|+++++++.+.+++|.+|+++++..+      .+++
T Consensus       110 ~Ivit~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  189 (428)
T d1iaya_         110 RVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKV  189 (428)
T ss_dssp             SCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCE
T ss_pred             hEEEcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCc
Confidence            99999999999999999999999999999999999987666 4588999999888888999999886543      3467


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc--------CCCCCEEEEcccccc
Q 014631          184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF--------GSTVPVITLGSMSKR  255 (421)
Q Consensus       184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~s~sK~  255 (421)
                      +++++++||||||.+++.+++++|+++|++||++||+||+|+++.+++..+.++..+        ...++++++.||||.
T Consensus       190 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~  269 (428)
T d1iaya_         190 KGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD  269 (428)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTT
T ss_pred             eEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCc
Confidence            889999999999999999999999999999999999999999999988766554332        234678999999999


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHhh
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      |+++|+|+||+++++       +.+.+.+...... ...+...+.++.+.+....  +.++++.++.++++++.+.+.|+
T Consensus       270 ~~~~GlRiG~~~~~~-------~~l~~~~~~~~~~-~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~  341 (428)
T d1iaya_         270 MGLPGFRVGIIYSFN-------DDVVNCARKMSSF-GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLE  341 (428)
T ss_dssp             SSCGGGCEEEEEESC-------HHHHHHHHHHHTT-SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcccccccccc-------cchhhhhhhhhcc-cccccccccchhhhhhhhccccccccccccccchhHHHHHHHHH
Confidence            999999999999853       3455555544433 3556666666666654322  46778888889999999999998


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccC-CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEG-ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLGR  409 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~~  409 (421)
                      .. |+. +..|++|+|+|++++...... ..++.+++.++++++||.+.||..|+.  ++++|+|++ .++++|++++++
T Consensus       342 ~~-gi~-~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~~~l~~al~R  419 (428)
T d1iaya_         342 VV-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALAR  419 (428)
T ss_dssp             HT-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHH
T ss_pred             hC-CCE-EecCCcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCHHHHHHHHHH
Confidence            75 888 558999999999987532111 112456788888899999999999875  689999998 577889999999


Q ss_pred             HHHHHHHh
Q 014631          410 IKAFCQRH  417 (421)
Q Consensus       410 l~~~~~~~  417 (421)
                      |++++...
T Consensus       420 l~~~l~~~  427 (428)
T d1iaya_         420 IRRFVGVE  427 (428)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhhc
Confidence            99998754

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-48  Score=366.56  Aligned_cols=337  Identities=29%  Similarity=0.464  Sum_probs=285.7

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      ..+|||+.|.|.    +++|+.+++++.+.+.+  .+.|++..|+++||++||+++      ++++++|++|+|+++++.
T Consensus        25 ~~~I~ls~g~p~----~~~p~~i~~al~~~l~~--~~~Y~~~~G~~elr~aiA~~~------~~~~~~Iiit~G~~~al~   92 (368)
T d1v2da_          25 LGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF------AVEPESVVVTSGATEALY   92 (368)
T ss_dssp             HTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH------TSCGGGEEEESSHHHHHH
T ss_pred             CCCEEecCCCCC----CCCCHHHHHHHHHHhhc--ccCCCCCcCCHHHHHHHHhhc------ccCCcceeeccchHHHHH
Confidence            458999999976    68899999999998865  368999999999999999998      478999999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC-CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP-EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      .++.+++++||.|++++|+|..+...+...|.+++.++++. .+++.+|++++++.+.++++.+++++||||||..++.+
T Consensus        93 ~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~~~~  172 (368)
T d1v2da_          93 VLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGER  172 (368)
T ss_dssp             HHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhccCceEEEEcCCCCcccccCCHH
Confidence            99999999999999999999999999999999998888753 34678999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|+++|++||+++|+||+|..+.+.......  .....++.+++.|+||.++++|+|+||+++++        ++.+
T Consensus       173 ~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~--------~~~~  242 (368)
T d1v2da_         173 ELEAIARLARAHDLFLISDEVYDELYYGERPRRL--REFAPERTFTVGSAGKRLEATGYRVGWIVGPK--------EFMP  242 (368)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCH--HHHCTTTEEEEEEHHHHTTCGGGCCEEEECCT--------TTHH
T ss_pred             HHHHHHHHHHHcCCeeeechhhhhhccccccccc--ccccccccceeecccccccccccccccccccc--------cccc
Confidence            9999999999999999999999887655443222  22334567888899999999999999999864        3455


Q ss_pred             HHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631          283 SIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE  360 (421)
Q Consensus       283 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  360 (421)
                      .+..... ...+++.+.|.++..++.... ..++++.++.++++++.+.+.|+++ |+. +..|++++|+|++++..   
T Consensus       243 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~p~g~~~~~~~l~~~---  317 (368)
T d1v2da_         243 RLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLR-VYVPEGTYFLMAELPGW---  317 (368)
T ss_dssp             HHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCC-EECCSBSSEEEEECTTC---
T ss_pred             hhhhhhhccccccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhc-CcE-EecCCceeEEEEeCCcc---
Confidence            5555443 345778888888888876532 4678888999999999999999988 888 55899999999998732   


Q ss_pred             CCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          361 GISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                         +.    .++++++||.++||+.|+.    ++++|||++.++|++++++++|++++
T Consensus       318 ---~~----~~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         318 ---DA----FRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVV  368 (368)
T ss_dssp             ---CH----HHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred             ---HH----HHHHHhCCEEEEechhhCCCCCCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence               22    2467889999999998863    57899999989999999999999874

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=1.1e-48  Score=371.15  Aligned_cols=375  Identities=16%  Similarity=0.119  Sum_probs=297.2

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i   95 (421)
                      +++++.++++|+++++.++++.    .+++|||++|.+. .....+..+.|++++.+.+.++..+.|++..|+++||+++
T Consensus         5 ~~~~~~p~d~i~~~~~~~~~d~----~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai   80 (401)
T d7aata_           5 SHVEMGPPDPILGVTEAFKRDT----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS   80 (401)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHCC----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred             ccCCCCCCChHHHHHHHHhCCC----CCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHH
Confidence            6788889999999999998754    4678999999532 2233566789999999988887667899999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEcCCH-----HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631           96 ADYLNSELPCKLSPDDVYLTAGC-----KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV  170 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i~~~~g~-----~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  170 (421)
                      ++++.+.++....++.|+.+.++     .+++..+++.+++|||+|++++|+|++|...++..|++++.+++.+++++..
T Consensus        81 a~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~  160 (401)
T d7aata_          81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL  160 (401)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred             HHHHhccCCcccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEeccccccccc
Confidence            99999887777778888766543     3567777888999999999999999999999999999999999988888889


Q ss_pred             CHHHHHhhh---ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc---ccCCCC
Q 014631          171 DLDGLEALA---DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG---VFGSTV  244 (421)
Q Consensus       171 d~e~l~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~---~~~~~~  244 (421)
                      +++.+.+.+   .++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++.......   .....+
T Consensus       161 ~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~  240 (401)
T d7aata_         161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI  240 (401)
T ss_dssp             CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred             cHHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhc
Confidence            999887766   35778899999999999999999999999999999999999999999998764322211   123345


Q ss_pred             CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccc-----hhHHHHHH
Q 014631          245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTK-----EDFFSKIV  318 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~  318 (421)
                      +++++.|+||.++++|+|+||++++...... ...+...+... .....+++.+.|.++...+....     ..+.+..+
T Consensus       241 ~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~  319 (401)
T d7aata_         241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEE-AKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMA  319 (401)
T ss_dssp             CCEEEEECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             ccceeEeccccceeeccccceeecchHHHHH-HHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            6788899999999999999999997542110 01111112111 12345677788888888776522     35567778


Q ss_pred             HHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631          319 DILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT  395 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~  395 (421)
                      ++++++++.+.+.|+++.   .|. ...|++|+|+|+.+          +.+++.+|++++||.+.||.        |||
T Consensus       320 ~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~l----------s~e~~~~L~~e~gV~~~pg~--------Ris  380 (401)
T d7aata_         320 DRIISMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGL----------KPEQVERLTKEFSIYMTKDG--------RIS  380 (401)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCC----------CHHHHHHHHHHHCEECCTTC--------EEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCcc-eECCCCeEEEecCC----------CHHHHHHHHHhCCEEECCCc--------EEE
Confidence            889999999999999762   133 23688999999755          34678889999999999984        999


Q ss_pred             ec-CCHHHHHHHHHHHHHHHH
Q 014631          396 FA-IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       396 ~~-~~~e~l~~~~~~l~~~~~  415 (421)
                      ++ .++++|+.+.++|.++++
T Consensus       381 ~a~~~~~~i~~la~ai~~v~k  401 (401)
T d7aata_         381 VAGVASSNVGYLAHAIHQVTK  401 (401)
T ss_dssp             GGGCCTTTHHHHHHHHHHHHC
T ss_pred             eccCCHHHHHHHHHHHHHHhC
Confidence            98 788999999999998863

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=3.8e-44  Score=334.58  Aligned_cols=333  Identities=18%  Similarity=0.321  Sum_probs=271.3

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..++|||+.|.+.    +++|+.+++++.+....  ++.| |..+..+||+++|+++      ++++++|++|+|+++++
T Consensus        21 p~~~idls~~~np----~~~p~~~~~a~~~~~~~--~~~Y-p~~~~~~Lr~aia~~~------~v~~~~I~~~~g~~~~~   87 (355)
T d1lc5a_          21 PDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERY-PDADYFHLHQALARHH------QVPASWILAGNGETESI   87 (355)
T ss_dssp             GGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSC-CCTTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred             hhheEEccCCCCC----CCCCHHHHHHHHHHHHH--hccC-CCCChHHHHHHHHHHh------CCCHHHEEecccHHHHH
Confidence            3468999998644    46789999999987765  4578 4456799999999998      47889999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ  202 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~  202 (421)
                      ..++..+.  |+.+++..|.|..|.......+.+++.+++..++++.++ +++++.+.++++++++++||||||..++.+
T Consensus        88 ~~~~~~~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~l~nP~NPtG~~~~~e  164 (355)
T d1lc5a_          88 FTVASGLK--PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERP  164 (355)
T ss_dssp             HHHHHHHC--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHhhhc--cccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccccccceeeeecccCcccccchhh
Confidence            98887763  556667789999888888899999999998877777666 567777788999999999999999999999


Q ss_pred             HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631          203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD  282 (421)
Q Consensus       203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  282 (421)
                      ++++|+++|++|++++|+||+|.++.+.+.....  .....++++++.||||.|+++|+|+||+++++       ..+.+
T Consensus       165 ~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~-------~~~~~  235 (355)
T d1lc5a_         165 LLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD-------DAAMA  235 (355)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGG--GCTTCTTEEEEEESTTTTTCTTTCCEEEECCC-------HHHHH
T ss_pred             hhhhhhhhccccccccccccceeeeeeecccccc--cccccccceeecccccccccccccccceeccc-------hhhhH
Confidence            9999999999999999999999998766544333  23445689999999999999999999999864       22344


Q ss_pred             HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631          283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI  362 (421)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (421)
                      .++.... ..+.+.+++.++..+++.  ..++.+.+++++++++++.+.|.+++++. + .|.+++|+|+.++.      
T Consensus       236 ~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~p~~~~f~~~~~~~------  304 (355)
T d1lc5a_         236 RMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER------  304 (355)
T ss_dssp             HHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC------
T ss_pred             HHHhhcC-Cccccccccccccccccc--cchhHHHHHHHHHHHHHHHHHHhhcCCcE-E-CCCCCEEEEEECCC------
Confidence            4444332 346778889998888864  56788888899999999999999988887 4 57889999998874      


Q ss_pred             CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631          363 SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC  414 (421)
Q Consensus       363 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~  414 (421)
                       ++.+++..| .++||.|+||..|..  ++++||+++ +++++++++++|++++
T Consensus       305 -~~~~~~~~L-~~~gv~vr~~~~f~~~~~~~iRis~~-~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         305 -EDIDLQRRL-LTQRILIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVL  355 (355)
T ss_dssp             -TTCCHHHHH-HTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred             -CHHHHHHHH-HHCCcEEEeCccCCCCCCCEEEEEeC-CHHHHHHHHHHHHHhC
Confidence             345566666 567999999988854  579999987 6788999999998864

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=3.3e-45  Score=348.32  Aligned_cols=378  Identities=14%  Similarity=0.117  Sum_probs=284.7

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAVRSA-EFDCYSPSVGILPARRA   94 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~l~~~   94 (421)
                      +++++.++++|+++...++++.    .+++|||++|.. +....++..+.|+++........ ..+.|.|..|+++||++
T Consensus         7 ~~~~~~~~~~i~~l~~~~~~d~----~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lrea   82 (412)
T d1ajsa_           7 AEVPQAQPVLVFKLIADFREDP----DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTC   82 (412)
T ss_dssp             TTCCCCCCCHHHHHHHHHHTCC----CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred             hhCCcCCCChHHHHHHHHhcCC----CCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHH
Confidence            4577888899999999998654    467899999931 21233566788988877665543 34579999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEE--EcCCHHHHHHHHHHH-------hcCCCCeEEEcCCCCcchHHHHhhcCceeEeee-ccC
Q 014631           95 IADYLNSELPCKLSPDDVY--LTAGCKQAIQVILTV-------LARPGANILLPKPGFPLYEANARHTRLEIRHFD-LLP  164 (421)
Q Consensus        95 ia~~l~~~~~~~~~~~~i~--~~~g~~~al~~~~~~-------l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~  164 (421)
                      +++++.+.++...+++++.  .|.+++.++.....+       +.+|||+|++++|+|.+|...++..|++.+.++ ...
T Consensus        83 ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~  162 (412)
T d1ajsa_          83 ASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWD  162 (412)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEE
T ss_pred             HHHHHhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccc
Confidence            9999988776655666654  455666555554443       368999999999999999999999998865543 444


Q ss_pred             CCCccCCHHHHHhhh---ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc---cc
Q 014631          165 EKGWEVDLDGLEALA---DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR---MG  238 (421)
Q Consensus       165 ~~~~~~d~e~l~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~---~~  238 (421)
                      ++.+..|++.+++.+   .++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++.....   ..
T Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~  242 (412)
T d1ajsa_         163 TEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRY  242 (412)
T ss_dssp             TTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred             cccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhh
Confidence            556678888876653   457788899999999999999999999999999999999999999999987643211   12


Q ss_pred             ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hh
Q 014631          239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----ED  312 (421)
Q Consensus       239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~  312 (421)
                      .....+.++++.|+||.++++|+|+||++++...... ...+...+.... ....+++.+.|.++..++....     ..
T Consensus       243 ~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (412)
T d1ajsa_         243 FVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDS-ILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTG  321 (412)
T ss_dssp             HHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHH
T ss_pred             hhhhcccccccccccccccCCCCCccccccchhHHHH-HHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHH
Confidence            2234556788999999999999999999997542111 111222222221 2345777888888877775421     34


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCC--C-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC
Q 014631          313 FFSKIVDILRDTADICYDRIKEIP--C-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK  389 (421)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~  389 (421)
                      +++..+++++++++.+.+.|+++.  + +. ...+.+|+|.|+.+          +.+++.+|++++||++.||.     
T Consensus       322 ~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~-~i~~~~G~F~~~~l----------s~~~v~~L~~e~gV~~vpg~-----  385 (412)
T d1ajsa_         322 NVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGL----------NPKQVEYLINQKHIYLLPSG-----  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCC----------CHHHHHHHHHTTCEECCTTS-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCee-eecCCCeEEEecCC----------CHHHHHHHHHhCCEEEeCCC-----
Confidence            567778889999999999998762  1 33 23577899998655          24567888899999999985     


Q ss_pred             CeEEEEec-CCHHHHHHHHHHHHHHHHHhh
Q 014631          390 NWLRITFA-IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       390 ~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~  418 (421)
                         |||++ .++++++.++++|++++++++
T Consensus       386 ---Ri~~ag~~~~~i~~~a~aI~~av~~~~  412 (412)
T d1ajsa_         386 ---RINMCGLTTKNLDYVATSIHEAVTKIQ  412 (412)
T ss_dssp             ---EEEGGGCCTTTHHHHHHHHHHHHHHCC
T ss_pred             ---eEEeccCCHHHHHHHHHHHHHHHHhcC
Confidence               99997 788999999999999998863

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-45  Score=348.14  Aligned_cols=374  Identities=18%  Similarity=0.153  Sum_probs=271.0

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i   95 (421)
                      ++++..|+++|+++.+.++++.    .++.|||++|.+. ..+..|.++.|++|+.+.+++...+.|++..|+++||+++
T Consensus         3 ~~~~~~p~d~i~~~~~~~~~d~----~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~ai   78 (396)
T d2q7wa1           3 ENITAAPADPILGLADLFRADE----RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCT   78 (396)
T ss_dssp             TTCCCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHH
T ss_pred             cccccCCCChHHHHHHHHhccC----CCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHH
Confidence            3566777889999988887544    4567999999422 1233567799999999988877777899999999999999


Q ss_pred             HHHHhhhCCCCCCCCcE--EEcCCHHHHHHHHHHH--hcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631           96 ADYLNSELPCKLSPDDV--YLTAGCKQAIQVILTV--LARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD  171 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~--l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d  171 (421)
                      ++|+.++++....++.+  +.+.|++.++.+++..  ...+||.|++++|+|++|...+...|++++.++...++++..+
T Consensus        79 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~  158 (396)
T d2q7wa1          79 QELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLD  158 (396)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEEC
T ss_pred             HHHHHhhcCCcccccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEecccccccccccc
Confidence            99998877755555554  4566666666555443  4689999999999999999999999999999998877777777


Q ss_pred             HHHHHhhh---ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc--cCCCCCE
Q 014631          172 LDGLEALA---DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV--FGSTVPV  246 (421)
Q Consensus       172 ~e~l~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~~~  246 (421)
                      .+.+++..   .++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++........  .+..++.
T Consensus       159 ~~~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~  238 (396)
T d2q7wa1         159 FDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKEL  238 (396)
T ss_dssp             HHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCE
T ss_pred             cchHHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccc
Confidence            77666543   456788899999999999999999999999999999999999999999887543222111  1224567


Q ss_pred             EEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh-hcccccCCchHHHHHHHHHhhccc-----hhHHHHHHHH
Q 014631          247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG-YLNISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDI  320 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~  320 (421)
                      +++.|+||.|+++|+|+||++++...... ...+...... ......+++...|.++..++....     ++++++.+++
T Consensus       239 ~~~~s~sk~~~~~G~R~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (396)
T d2q7wa1         239 IVASSYSKNFGLYNERVGACTLVAADSET-VDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQR  317 (396)
T ss_dssp             EEEEECTTTTTCGGGCCEEEEEECSSHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CH
T ss_pred             cccccccccccccCCCccccccchhHHHH-HHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Confidence            88889999999999999999997542110 0111111111 122345777788888777775421     3567777889


Q ss_pred             HHHHHHHHHHHhhcC-CC--ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec
Q 014631          321 LRDTADICYDRIKEI-PC--ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA  397 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~-~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~  397 (421)
                      ++++++.+.+.|+++ +.  +. ...+.+|+|.|+.++          .+++.+|++++||++.||+        |||++
T Consensus       318 ~~~~r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~l~----------~e~~~~L~~e~gV~~~~g~--------Ri~~a  378 (396)
T d2q7wa1         318 IQRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLT----------KEQVLRLREEFGVYAVASG--------RVNVA  378 (396)
T ss_dssp             HHHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTC--------EEEGG
T ss_pred             HHHHHHHHHHHHHHhCCCCCcc-eecCCCeEEEeeCCC----------HHHHHHHHHhCCEEECCCC--------EEEec
Confidence            999999999999986 11  43 235778999997553          4578889999999999875        99997


Q ss_pred             -CCHHHHHHHHHHHHHHH
Q 014631          398 -IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~  414 (421)
                       .++++|+.++++|++++
T Consensus       379 ~l~~~~i~~~~~ai~~v~  396 (396)
T d2q7wa1         379 GMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             GCCTTTHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHhC
Confidence             68899999999998864

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=1.4e-44  Score=343.57  Aligned_cols=377  Identities=15%  Similarity=0.121  Sum_probs=288.9

Q ss_pred             hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHH
Q 014631           17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAVRS-AEFDCYSPSVGILPARRA   94 (421)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~l~~~   94 (421)
                      ++++..++++|+++.+.++++.    .+++|||++|.. +.....+..+.|+++....... ...+.|+|..|.++||++
T Consensus         6 ~~~~~~~~d~i~~~~~~~~~d~----~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~a   81 (412)
T d1yaaa_           6 NNIELLPPDALFGIKQRYGQDQ----RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN   81 (412)
T ss_dssp             TTCCCCCCCTTHHHHHHHHTCC----CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred             hcCCcCCCChHHHHHHHHhcCC----CCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHH
Confidence            4577888999999999988755    456799999942 1123345668888886655443 334679999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEc--CCHHHHHHHHH--HHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631           95 IADYLNSELPCKLSPDDVYLT--AGCKQAIQVIL--TVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV  170 (421)
Q Consensus        95 ia~~l~~~~~~~~~~~~i~~~--~g~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  170 (421)
                      +++++.+.++....++.++.+  .|+..++..++  ..+..+||.|++++|+|..|...+...|.+++.++...++++.+
T Consensus        82 ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~  161 (412)
T d1yaaa_          82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSL  161 (412)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEE
T ss_pred             HHHHHhcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecccccccccccc
Confidence            999998876644445554433  44455544443  34468999999999999999999999999999999887788888


Q ss_pred             CHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc------cccC
Q 014631          171 DLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM------GVFG  241 (421)
Q Consensus       171 d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~------~~~~  241 (421)
                      +.+.+++.+.   +.++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++....+.      ...+
T Consensus       162 ~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~  241 (412)
T d1yaaa_         162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLS  241 (412)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTT
T ss_pred             cchhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccc
Confidence            9888877653   456678899999999999999999999999999999999999999999876433221      2234


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh----hh-cccccCCchHHHHHHHHHhhccc-----h
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK----GY-LNISSGPATFVQGAVPQIFKNTK-----E  311 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~l~~~~-----~  311 (421)
                      ..++++++.|+||.|+++|+|+||++++.+.... ..+..+.+.    .. .....+++.+.|.++..++....     .
T Consensus       242 ~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~  320 (412)
T d1yaaa_         242 TVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQ-NKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH  320 (412)
T ss_dssp             TTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTT-HHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred             cCCCeEEEEecCCccccCcCceEEEEEchhhhhh-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHH
Confidence            5567899999999999999999999998543211 112222221    11 23456788899999888887522     3


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcC--CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631          312 DFFSKIVDILRDTADICYDRIKEI--PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM  388 (421)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  388 (421)
                      .+++..++.++++++.+.+.|+++  ++ |. +..|++|+|.|+.+          +.+++++|++++||.+.||.    
T Consensus       321 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~~~~gG~F~~~~l----------s~e~~~~L~~e~~V~~~~g~----  385 (412)
T d1yaaa_         321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGL----------TPQMVKRLEETHAVYLVASG----  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCC----------CHHHHHHHHHHHCEECCTTS----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc-eeCCCceEEEecCc----------CHHHHHHHHHhCCEEECCCC----
Confidence            556777889999999999999875  22 44 34688999999655          34678899999999999875    


Q ss_pred             CCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631          389 KNWLRITFA-IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       389 ~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~  417 (421)
                          |||++ .++++++.+.++|+++++.+
T Consensus       386 ----Ris~~g~~~~~i~~l~~ai~~v~k~~  411 (412)
T d1yaaa_         386 ----RASIAGLNQGNVEYVAKAIDEVVRFY  411 (412)
T ss_dssp             ----EEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             ----EEEeccCCHHHHHHHHHHHHHHHHhh
Confidence                99997 78899999999999998764

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6e-46  Score=351.78  Aligned_cols=373  Identities=16%  Similarity=0.118  Sum_probs=285.4

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCC-CCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSA-FPCFRTTPVAADAVVDAVRS-AEFDCYSPSVGILPARRAI   95 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~l~~~i   95 (421)
                      +++..+.++|.++.+.++++.    .++.|||++|.+.. ...+|..+.|++|....... ...+.|+|..|+++||+++
T Consensus         4 ~~~~~~~dpi~~~~~~~~~d~----~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~ai   79 (397)
T d3tata_           4 KVDAYAGDPILTLMERFKEDP----RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAI   79 (397)
T ss_dssp             CCCCCCCCTTTTHHHHHHHSC----CSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHH
T ss_pred             cCCCCCCCcHHHHHHHHhcCC----CCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHH
Confidence            456667788999999888654    45679999995321 12245678899987766543 2345799999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEcCCHHHH----HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631           96 ADYLNSELPCKLSPDDVYLTAGCKQA----IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD  171 (421)
Q Consensus        96 a~~l~~~~~~~~~~~~i~~~~g~~~a----l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d  171 (421)
                      ++|+.+.++...++++|+.+.+++++    +.+++..+..|||.|++++|+|.+|...++..|.+++.+|...++++..+
T Consensus        80 a~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~  159 (397)
T d3tata_          80 APLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVR  159 (397)
T ss_dssp             HHHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCC
T ss_pred             HHHHhhccCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccc
Confidence            99999888877788899887765553    55666667799999999999999999999999999999999888888888


Q ss_pred             HHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc-c-ccCCCCCE
Q 014631          172 LDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM-G-VFGSTVPV  246 (421)
Q Consensus       172 ~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~-~~~~~~~~  246 (421)
                      .+++.+.+.   ++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++....+. . .....+++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~  239 (397)
T d3tata_         160 FNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPA  239 (397)
T ss_dssp             HHHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCC
T ss_pred             hHHHHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCce
Confidence            888877543   467788999999999999999999999999999999999999999999875432221 1 12344578


Q ss_pred             EEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccc-----hhHHHHHHHH
Q 014631          247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDI  320 (421)
Q Consensus       247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~  320 (421)
                      +++.|+||.|+++|+|+||++++...... ...+....... .....+++...|.++...+....     ..+.+..+++
T Consensus       240 i~~~s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (397)
T d3tata_         240 LVSNSFSKIFSLYGERVGGLSVMCEDAEA-AGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTR  318 (397)
T ss_dssp             EECBCCHHHHTBTTTCCBCCEEECSSTTH-HHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCcccccccCccccccccchhHHHH-HHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999987543211 11122222222 22345667788888777775421     2345556677


Q ss_pred             HHHHHHHHHHHhhcC-CC--ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec
Q 014631          321 LRDTADICYDRIKEI-PC--ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA  397 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~-~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~  397 (421)
                      ++++++.+.+.|... +.  |. +..|.+|+|+|+.++          .+++.+|++++||.+.||.        |||++
T Consensus       319 ~~~~r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~ls----------~e~~~~L~~e~~V~l~~g~--------Ri~~a  379 (397)
T d3tata_         319 ILAMRQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS----------AAQVDRLREEFGVYLIASG--------RMCVA  379 (397)
T ss_dssp             HHHHHHHHHHTTTTTCTTSCTT-HHHHCCSSBCCCCCC----------HHHHHHHTTTTCEECCSSS--------CCBTT
T ss_pred             HHHHHHHHHHHHHHhCCCCceE-EEcCCCceEEecCcC----------HHHHHHHHHhCCEEeCCCC--------EEEec
Confidence            778888888888765 22  44 336889999997663          4578889999999999975        99997


Q ss_pred             -CCHHHHHHHHHHHHHHH
Q 014631          398 -IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~  414 (421)
                       .++++++++.++|++++
T Consensus       380 ~~~~~~i~~~~~ai~~v~  397 (397)
T d3tata_         380 GLNTANVQRVAKAFAAVM  397 (397)
T ss_dssp             SCCTTTHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHHhC
Confidence             78899999999988763

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=5.9e-44  Score=337.99  Aligned_cols=372  Identities=14%  Similarity=0.114  Sum_probs=279.9

Q ss_pred             HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631           18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA   96 (421)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia   96 (421)
                      +++..++++|++++..++++.    .+..|||++|... ....++.++.|.+|+++.++....+.|+|..|+++||++++
T Consensus         4 ~~~~~~~d~i~~l~~~~~~d~----~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia   79 (394)
T d2ay1a_           4 NLKPQAPDKILALMGEFRADP----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMG   79 (394)
T ss_dssp             GCCCCCCCSHHHHHHHHHHCC----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHhCCC----CCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Confidence            466677899999999998754    4678999999532 22345677999999999988766678999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEcCC-HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631           97 DYLNSELPCKLSPDDVYLTAG-CKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL  175 (421)
Q Consensus        97 ~~l~~~~~~~~~~~~i~~~~g-~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  175 (421)
                      +++.+..+....++.+++++| +..++.+.+..+.++||.|++++|+|..|...++..|.+++.++...++.+..+.+++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  159 (394)
T d2ay1a_          80 ELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGM  159 (394)
T ss_dssp             HHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHH
T ss_pred             HHHhccccccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhH
Confidence            999876654433444444333 2444555556667999999999999999999999999999999987777777777776


Q ss_pred             Hhhh---ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc--cCCCCCEEEEc
Q 014631          176 EALA---DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV--FGSTVPVITLG  250 (421)
Q Consensus       176 ~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~~~i~~~  250 (421)
                      ++..   .++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++....+...  .....+++++.
T Consensus       160 ~~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~  239 (394)
T d2ay1a_         160 KADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAA  239 (394)
T ss_dssp             HHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEE
T ss_pred             HHHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhcccccccc
Confidence            6543   445677788899999999999999999999999999999999999999987643322211  12234578888


Q ss_pred             ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHHHHHHHHH
Q 014631          251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDILRDT  324 (421)
Q Consensus       251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~  324 (421)
                      |+||.++++|+|+||++++...... ...+...+.... ....+++...+..+...+....     ...++..+++++++
T Consensus       240 s~sk~~~~~G~R~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  318 (394)
T d2ay1a_         240 SCSKNFGIYRERTGCLLALCADAAT-RELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRL  318 (394)
T ss_dssp             ECTTTTTCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCCcccccchhhchhHHHH-HHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997543111 011111111111 2334666677777766665421     35566677888899


Q ss_pred             HHHHHHHhhcCC--C-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCH
Q 014631          325 ADICYDRIKEIP--C-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEP  400 (421)
Q Consensus       325 ~~~~~~~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~  400 (421)
                      ++.+.+.|+++.  + |. +..|.+|+|+|+.+          +.+++.+|++++||++.||.        |||++ .++
T Consensus       319 r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~l----------s~~~~~~L~~~~~V~~~~g~--------Ri~~a~l~~  379 (394)
T d2ay1a_         319 REQLAGELRDLSGSDRFG-FVAEHRGMFSRLGA----------TPEQVKRIKEEFGIYMVGDS--------RINIAGLND  379 (394)
T ss_dssp             HHHHHHHHHHHHTSSTTT-HHHHCCSSEEECCC----------CHHHHHHHHHHHCEECCTTC--------EEEGGGCCT
T ss_pred             HHHHHHHHHHhCCCCcee-eECCCceeEEecCc----------CHHHHHHHHHhCCEEecCCC--------EEEecCCCH
Confidence            999999998752  1 44 33688999999765          34678899999999999974        99997 788


Q ss_pred             HHHHHHHHHHHHH
Q 014631          401 SALEEGLGRIKAF  413 (421)
Q Consensus       401 e~l~~~~~~l~~~  413 (421)
                      ++++.+.++|+++
T Consensus       380 ~~i~~l~~ai~~v  392 (394)
T d2ay1a_         380 NTIPILARAIIEV  392 (394)
T ss_dssp             TTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998875

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.3e-41  Score=311.87  Aligned_cols=323  Identities=17%  Similarity=0.294  Sum_probs=252.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      +...|.|+.+...    +++++.+.        ...+++|++. +..+||+++|+++      ++++++|++|+|+++++
T Consensus        26 ~~~~i~L~~ne~p----~~~~~~~~--------~~~l~rYPd~-~~~~Lr~~ia~~~------gv~pe~I~it~Gs~eai   86 (354)
T d1fg7a_          26 GNGDVWLNANEYP----TAVEFQLT--------QQTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGI   86 (354)
T ss_dssp             TTCSEECSSCCCS----SCCCCCCC--------CCCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHH
T ss_pred             CCCCEEeeCCCCC----CCCCHHHH--------HHHHhcCCCC-cHHHHHHHHHHHh------CCChHHeeeccCchHHH
Confidence            5677999988622    12333222        2245678544 5689999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCC-eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVLARPGA-NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ..+++++++||| .|+++.|+|..+...+...|.+++.++.  +++|.+|+++++..+. +++++++++||||||.+++.
T Consensus        87 ~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~--~~~~~~d~~~l~~~~~-~~~~v~~~~pnNPtG~~~~~  163 (354)
T d1fg7a_          87 ELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPT--LDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINP  163 (354)
T ss_dssp             HHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCC--CTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhhccccccccccccccccchhhhhccCceeecccc--ccccccchhhhhhccc-ccceeeccCCCccceeEeee
Confidence            999999999998 5888999999999999999999988775  4578899999988764 78999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      ++++.+.+.++ ++.++|+||+|.++......   .......+++++++||||.|+++|+|+||++++        ++++
T Consensus       164 ~~~~~~~~~~~-~~~~~iidd~~~~f~~~~~~---~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~--------~~~i  231 (354)
T d1fg7a_         164 QDFRTLLELTR-GKAIVVADEAYIEFCPQASL---AGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI  231 (354)
T ss_dssp             HHHHHHHHHHT-TTCEEEEECTTGGGSGGGCS---GGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred             ccccccccccc-ccccccccccchhhcccccc---chhhcccccceEEeCCccccCCCcccccccccc--------chhh
Confidence            99999988886 56778888888887644322   122345668899999999999999999999986        4677


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+.+.... ...+.+++.++..++......+.....+++.+.++.+.+.+.+++++..+ .|++++|+|++++      
T Consensus       232 ~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~-~p~~~~f~~~~~~------  303 (354)
T d1fg7a_         232 NLLMKVIAP-YPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFK------  303 (354)
T ss_dssp             HHHHHHSCS-SCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEET------
T ss_pred             hhhhhhcCc-cchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCccee-CCCCceEEEEeCC------
Confidence            877776554 35566677666666654334556666777888899999999998776523 6888999999886      


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCC-CCCCeEEEEecCCHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAV-GMKNWLRITFAIEPSALEEGLGRIK  411 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~-~~~~~iRi~~~~~~e~l~~~~~~l~  411 (421)
                        ++.+++..| .++||.|+++..| +.++++|||++ ++++.++++++|+
T Consensus       304 --~~~~~~~~L-~~~gIlvr~~~~~~~~~~~lRisig-t~ee~~~~l~aLk  350 (354)
T d1fg7a_         304 --ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALR  350 (354)
T ss_dssp             --THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHH
T ss_pred             --CHHHHHHHH-HHCCcEEecCCCCCCCCCEEEEEeC-CHHHHHHHHHHHh
Confidence              356666665 5679999998876 44789999997 5567777777765

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.6e-40  Score=304.44  Aligned_cols=317  Identities=18%  Similarity=0.226  Sum_probs=251.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .++++|+|+.|.+.    +|+|+.+.+++.+.+.....+.| |..|.++||+++|+|++.+   .+++++|++|+|++++
T Consensus        17 ~~~d~~~l~~~enp----~~~p~~i~~~~~~~~~~~~~~~y-p~~g~~~Lr~aia~~~~~~---~v~~d~I~it~G~~~~   88 (334)
T d2f8ja1          17 EKRDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKILSYLDTD---FLSKNNVSVGNGADEI   88 (334)
T ss_dssp             CCCCSEECSSCCCS----SCCCHHHHHHHHHHCCTTGGGSC-CCSSCHHHHHHHHHHHTCS---SCCGGGEEEEEHHHHH
T ss_pred             cCCCceEEECCCCC----CCCCHHHHHHHHHHhhcchhcCC-CCCCcHHHHHHHHHHhccc---CCCcceEEecCcchhH
Confidence            47899999999744    57889999999998877655445 6789999999999999764   2678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      +.++++    +||+|++++|+|..|...++..|++++.++++++..  .+     +...++++++++++|+||||.+++.
T Consensus        89 l~~l~~----~~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~--~~-----~~~~~~~~~l~l~nP~NPtG~~~s~  157 (334)
T d2f8ja1          89 IYVMML----MFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLR--IP-----EVNVGEGDVVFIPNPNNPTGHVFER  157 (334)
T ss_dssp             HHHHHH----HSSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSC--CC-----CCCCCTTEEEEEESSCTTTCCCCCH
T ss_pred             HHHHhh----hccccccccccccccccchhccCCcccccccccccc--cc-----ccccccceEEEecccccccceeecH
Confidence            987664    469999999999999999999999999999865432  11     2234578899999999999999998


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++.++    .++++++|+||+|.++......    ......+++++++||||.++++|+|+||++++        ++++
T Consensus       158 ~~l~~~----~~~~~~ii~Dd~~~~~~~~~~~----~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~--------~~~i  221 (334)
T d2f8ja1         158 EEIERI----LKTGAFVALDEAYYEFHGESYV----DFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFI  221 (334)
T ss_dssp             HHHHHH----HTTTCEEEEECTTGGGTCCCCG----GGGGTCSSEEEEEESTTTSSCTTTCEEEEEEC--------HHHH
T ss_pred             HHhhcc----ccceeEEeecccchhhcccccc----cccccCceEEEEecCccccchhhhhhhhcccc--------hHHH
Confidence            777653    4689999999999876543322    12234568999999999999999999999996        4677


Q ss_pred             HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631          282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG  361 (421)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (421)
                      +.+...... .+.+..++.++.+.+..  .+++++.++.++++++.+.+.|+++ |+. +..|. |.|+|+.++..    
T Consensus       222 ~~l~~~~~~-~~~s~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~-g~f~~~~~~~~----  291 (334)
T d2f8ja1         222 DAYNRVRLP-FNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDSR-GNFVFVFMEKE----  291 (334)
T ss_dssp             HHHHHHSCT-TCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCE-ECCCC-SSEEEEECCHH----
T ss_pred             HHHHHhhcc-cccchhhhhhccccccc--ccchhhHHHHHHHHHHHHHHHHHHC-CCe-ECCCC-ceEEEEECCCC----
Confidence            877776643 46778888888888864  5778888899999999999999998 888 43555 45788888753    


Q ss_pred             CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631          362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA  412 (421)
Q Consensus       362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~  412 (421)
                        +..++++.| .++||.++++     .+++|+|+++ .+++++++++|++
T Consensus       292 --~~~~~~~~L-~~~GI~vr~~-----~~~vRis~g~-~ee~~~l~~~l~~  333 (334)
T d2f8ja1         292 --EKERLLEHL-RTKNVAVRSF-----REGVRITIGK-REENDMILRELEV  333 (334)
T ss_dssp             --HHHHHHHHH-HHTTEECEEE-----TTEEEEECCC-HHHHHHHHHHHHH
T ss_pred             --CHHHHHHHH-HHCCCEECCC-----CCeEEEEcCC-HHHHHHHHHHHhc
Confidence              345566555 6679999764     4799999974 5677888888765

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=100.00  E-value=6.3e-38  Score=294.87  Aligned_cols=330  Identities=15%  Similarity=0.158  Sum_probs=245.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCC----CCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSV----GILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~----g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      ..-++|+++|+|..+    .|=...++-..++--.  ..+.|....    -.++|++.|+++.....+..++..+|++++
T Consensus        55 ~~~~~~~~~gdp~~~----~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG~  130 (425)
T d2hoxa1          55 QGCSADVASGDGLFL----EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV  130 (425)
T ss_dssp             TTCCEECCSCCCGGG----HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred             CCceeeCCCCCCCCC----CHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEECC
Confidence            556899999998832    2222333223222111  112343222    238999999999887766556667799999


Q ss_pred             CHHHHHHHHHHHh--------cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631          117 GCKQAIQVILTVL--------ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI  188 (421)
Q Consensus       117 g~~~al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~  188 (421)
                      |+++++++++.+|        .+|||+|+++.|.|+.|...++..+.+...        |.+|.+.+++.++++++++++
T Consensus       131 Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~--------~~~D~~~~~~~~~~~~~ii~l  202 (425)
T d2hoxa1         131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEMV  202 (425)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEEE
T ss_pred             CHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCc--------cCCCHHHHHhhCCCCceEEEE
Confidence            9999999999998        468999999999999999999888865443        446788888888889999999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      ++||||||.+..          +..+++.+|+||+|.+..+     .++.  ...+++|++.||||.|+++|+|+||+++
T Consensus       203 ~sPnNPtG~l~~----------~v~~~~~~I~DEaY~~~~f-----~~~~--~~~~~~Ivl~S~SK~fglaGlRiGw~i~  265 (425)
T d2hoxa1         203 TSPNNPEGLLRH----------AVIKGCKSIYDMVYYWPHY-----TPIK--YKADEDILLFTMSKFTGHSGSRFGWALI  265 (425)
T ss_dssp             ESSCTTTCCCCC----------CSSTTCEEEEECTTCSTTT-----SCCC--SCBCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred             ECCCCCCcchhh----------hhhhCCEEEEeccccCccc-----cchh--hhcCCeEEEEeCHHhccCcchheeeEEe
Confidence            999999998732          2346899999999965332     2322  2345689999999999999999999988


Q ss_pred             eCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhcc----------chhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631          269 SDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNT----------KEDFFSKIVDILRDTADICYDRIKEIPC  337 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~g  337 (421)
                      ++       +.+.+++..... ...+++.+.|.++.++|+..          ....++..++.++++++.+.+.|.+.+.
T Consensus       266 ~~-------~~i~~~~~~~~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~  338 (425)
T d2hoxa1         266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR  338 (425)
T ss_dssp             CC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred             CC-------HHHHHHHHHhhccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            65       356677766653 34578889999888887641          1356677788899999999999987644


Q ss_pred             ccccCC-------------CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEecCCHHHH
Q 014631          338 ITCPRK-------------PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFAIEPSAL  403 (421)
Q Consensus       338 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~~~~e~l  403 (421)
                      +.+...             +..+.|.|+++...       ..+++.++++++||.++||..|+. ++++|||+..++|++
T Consensus       339 ~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~~-------~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~~~~e~l  411 (425)
T d2hoxa1         339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE-------EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDF  411 (425)
T ss_dssp             EECCCCCSCEEETTTTEEECCCCSEEEEEECSG-------GGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHH
T ss_pred             ceeeccCCccceeeeeeccCCCcceeeeeCCCC-------hHHHHHHHHHhCCEEEEechhcCCCCCEEEEEecCCHHHH
Confidence            432212             22344677776542       334566788999999999999986 579999999999999


Q ss_pred             HHHHHHHHHHHH
Q 014631          404 EEGLGRIKAFCQ  415 (421)
Q Consensus       404 ~~~~~~l~~~~~  415 (421)
                      ++++++|+++++
T Consensus       412 d~~l~rL~~~v~  423 (425)
T d2hoxa1         412 DQLMYYLKDMVK  423 (425)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.1e-29  Score=239.69  Aligned_cols=349  Identities=15%  Similarity=0.184  Sum_probs=255.9

Q ss_pred             hHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--------CCCHHHHHHHHH
Q 014631           26 TVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS--------VGILPARRAIAD   97 (421)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--------~g~~~l~~~ia~   97 (421)
                      .+|+.++.+.+.   ..+.++++|+.+..+     +.|+.+.+++.+.+.+...+.....        .-+.+.|+.+++
T Consensus         6 ~vR~~FP~l~~~---~~~~~~iYld~a~~~-----~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~   77 (405)
T d1jf9a_           6 KVRADFPVLSRE---VNGLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASL   77 (405)
T ss_dssp             HHHHTCGGGGCE---ETTEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhChhcccC---cCCCCeEEEeCcccc-----CCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHH
Confidence            466666554421   135678899988755     7889999999998876322111011        124567888888


Q ss_pred             HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcch----HHHHhhcCceeEeeeccCCCCcc
Q 014631           98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVL----ARPGANILLPKPGFPLY----EANARHTRLEIRHFDLLPEKGWE  169 (421)
Q Consensus        98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~  169 (421)
                      +++     ...+++|++++|+|++++.++.++    .++||+|++.+..|++.    ...++..|++++.+|++++  ..
T Consensus        78 ~l~-----~~~~~~i~~~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~--g~  150 (405)
T d1jf9a_          78 FIN-----ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GT  150 (405)
T ss_dssp             HTT-----CSCGGGEEEESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT--SC
T ss_pred             HcC-----CCCcccccccCcHHHHHHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCC--Cc
Confidence            874     134689999999999999988763    47899999999999875    4455677999999998654  35


Q ss_pred             CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631          170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL  249 (421)
Q Consensus       170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  249 (421)
                      +|++.+++++++++++++++..+|.||..+|   +++|.++|+++|+++++|.+++.    |.....+..++.+   +++
T Consensus       151 ~~~~~~~~~i~~~t~lv~~~~v~~~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~----g~~~id~~~~~~D---~~~  220 (405)
T d1jf9a_         151 LQLETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAV----MHHPVDVQALDCD---FYV  220 (405)
T ss_dssp             BCGGGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EEE
T ss_pred             CCHHHHHHhccCCcEEEEEecCCCcccccCc---hHHhhhHHHHcCCeeecccceec----cccccchhhcCCc---eee
Confidence            8999999999999999999999999999966   77888999999999999999987    4444455555554   888


Q ss_pred             cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-----------------------cccccCCchHHHHHHHHHh
Q 014631          250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-----------------------LNISSGPATFVQGAVPQIF  306 (421)
Q Consensus       250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l  306 (421)
                      .|++|++|.+|  +|++++++        ++.+.+...                       +...++++.....++.+++
T Consensus       221 ~s~hK~~Gp~G--~g~l~v~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al  290 (405)
T d1jf9a_         221 FSGHKLYGPTG--IGILYVKE--------ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAAL  290 (405)
T ss_dssp             EEGGGTTSCSS--CEEEEECH--------HHHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHH
T ss_pred             ccccccccCCC--ceeeeech--------hhhcccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHH
Confidence            99999987666  78888852        333322110                       0112467778888888888


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC
Q 014631          307 KNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA  385 (421)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~  385 (421)
                      +...+..++.+.++...+.+++.+.++.++.+. ...|.. +..+.+.++..      +..++.. ++.++||.++.|+.
T Consensus       291 ~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~~-~~~~~~r~~ivsf~~~~~------~~~~~~~-~L~~~gI~v~~G~~  362 (405)
T d1jf9a_         291 EYVSALGLNNIAEYEQNLMHYALSQLESVPDLT-LYGPQNRLGVIAFNLGKH------HAYDVGS-FLDNYGIAVRTGHH  362 (405)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEE-EESCTTCCSEEEEEETTC------CHHHHHH-HHHHTTEECEEECT
T ss_pred             HHHHHhChHHHHHHHHHHHHHHHhhhhcCCccc-ccCCcCcCcEEEEEcCCC------CHHHHHH-HHHHCCcEEEccch
Confidence            754455678888888888999999999886655 323432 33444555532      4555555 45788999998886


Q ss_pred             C--------CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          386 V--------GMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       386 ~--------~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      +        +.++.+|+|++  ++.+|++++++.|+++.+-+
T Consensus       363 c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i~r~~  404 (405)
T d1jf9a_         363 CAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL  404 (405)
T ss_dssp             TCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            5        33578999998  89999999999999887643

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2e-29  Score=237.38  Aligned_cols=328  Identities=16%  Similarity=0.200  Sum_probs=227.5

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCC-C----------CHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-PSV-G----------ILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~-g----------~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      |+|+++..+     |.++.+.+++.+.+.+..  .|+ |.. .          +.++|+.+|+++      ++++++|++
T Consensus         4 iYlD~aa~~-----p~~~~v~ea~~~~~~~~~--~~~np~~~~~~~~~~~~~~~~~~R~~iA~~l------g~~~~~I~~   70 (391)
T d1p3wa_           4 IYLDYSATT-----PVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPREIVF   70 (391)
T ss_dssp             EECBTTTCC-----CCCHHHHHHHHTTTSTTS--CCCCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred             EEeeCcccc-----CCCHHHHHHHHHHHHhcc--ccCCCchhhhHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEE
Confidence            578777644     788999999999876532  333 211 1          346788899998      478999999


Q ss_pred             cCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631          115 TAGCKQAIQVILTVL----ARPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV  187 (421)
Q Consensus       115 ~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~  187 (421)
                      |+|+|++++.++.++    .++||+|++.++.|+++...+   +..|+++..++.+.  .+.+|+++++++++++|++|+
T Consensus        71 ~~~~t~~l~~~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~~~~~i~~~T~lv~  148 (391)
T d1p3wa_          71 TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTILVS  148 (391)
T ss_dssp             ESSHHHHHHHHHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEEEEE
T ss_pred             ECCHHHHHHHHHhhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCC--CCeEcHHHHHHhCCCCcEEEE
Confidence            999999999988765    479999999999998875544   45699999998753  345899999999999999999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      +++++||||..+|   +++|+++|+++|+++++|.+|+.    |....++...+.+   +++.|.+|++|.+|  +|+++
T Consensus       149 is~~~n~tG~~~~---~~~I~~~~~~~~~~~ivD~~~~~----g~~~~d~~~~~~D---~~~~s~~k~~g~~g--~g~~~  216 (391)
T d1p3wa_         149 IMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSV----GKLPIDLSQLKVD---LMSFSGHKIYGPKG--IGALY  216 (391)
T ss_dssp             CCSBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTB----TTBCCCTTTSCCS---EEEEESTTTTSCSS--CEEEE
T ss_pred             EECCCCCCeeECC---HHHHHHHhccCCcEEEEeecccc----CCccccchhcccc---ccccccccccCCCc--eEEEE
Confidence            9999999999977   67889999999999999999987    3333344444433   77789999987776  57777


Q ss_pred             eeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631          268 TSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT  339 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  339 (421)
                      ++...        .......        ....++.+.....++...+.. .........++++++.+.+.+.|.++++..
T Consensus       217 ~~~~~--------~~~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  287 (391)
T d1p3wa_         217 VRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI-AKEEMATEMERLRGLRNRLWNGIKDIEEVY  287 (391)
T ss_dssp             ECBTT--------BCCCCCSSCSSCTTTTTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTTTSTTEE
T ss_pred             Eecch--------hcccCCcccCCccccCcccCcchhhhhhhhhhhhhH-HHHHhhHHHHHHHHHHHHHHHHHHhhcCee
Confidence            75421        1111111        011223444444444444432 223445556777888888888888775544


Q ss_pred             ccCC-CC-ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec-
Q 014631          340 CPRK-PE-GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA-  397 (421)
Q Consensus       340 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~-  397 (421)
                      +... +. ......+.++..      ....+...+   +++.++.|..+..                   .+++|+|++ 
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~  358 (391)
T d1p3wa_         288 LNGDLEHGAPNILNVSFNYV------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGR  358 (391)
T ss_dssp             ECSCTTTSCTTEEEEEETTS------CHHHHHHHT---TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCT
T ss_pred             ecccccccCceEEEEEeCCC------ChHHHHHHh---CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCC
Confidence            2111 11 122233334321      355555443   4677776654421                   256999998 


Q ss_pred             -CCHHHHHHHHHHHHHHHHHhhh
Q 014631          398 -IEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       398 -~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                       ++.+|++++++.|+++++++++
T Consensus       359 ~nt~edid~l~~~l~~~l~~lr~  381 (391)
T d1p3wa_         359 FTTEEEIDYTIELVRKSIGRLRD  381 (391)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH
Confidence             7999999999999999998865

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.97  E-value=6.5e-28  Score=227.77  Aligned_cols=349  Identities=15%  Similarity=0.183  Sum_probs=254.7

Q ss_pred             hHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--------CCCHHHHHHHHH
Q 014631           26 TVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS--------VGILPARRAIAD   97 (421)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--------~g~~~l~~~ia~   97 (421)
                      .||+.++.+.+.   ..+.++|+|+.+..+     +.|+.+.+++.+.+.+...+.....        .-+++.|+.+++
T Consensus         6 ~iR~~FP~l~~~---~~~~~~iYld~a~~~-----~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~   77 (408)
T d1t3ia_           6 TVRQDFPILNQE---INGHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAK   77 (408)
T ss_dssp             HHGGGCGGGSCE---ETTEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCcccccc---cCCCCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence            366666544321   235678999998755     6889999999998876321100000        123467788888


Q ss_pred             HHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCc
Q 014631           98 YLNSELPCKLS-PDDVYLTAGCKQAIQVILTVL----ARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGW  168 (421)
Q Consensus        98 ~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~  168 (421)
                      +++      ++ ++.++++++++++++.++..+    .++||+|++.+-.|++..    ..++..|.++..++.+..  .
T Consensus        78 llg------a~~~~~i~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~--~  149 (408)
T d1t3ia_          78 FIN------ARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQ--E  149 (408)
T ss_dssp             HTT------CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTT--S
T ss_pred             HhC------CCCcccEEeecchHHHHHHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeecccc--c
Confidence            873      54 578999999999999988763    478999999999998754    344567899988886543  3


Q ss_pred             cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631          169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT  248 (421)
Q Consensus       169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  248 (421)
                      ..+.+.+++.++++++++.++..+|.||..+|   +++|.++|+++|+++++|.+|+.    |.....+..++.+   ++
T Consensus       150 ~~~~~~l~~~~~~~t~lv~i~~~~~~tG~~~p---~~~i~~~~~~~g~~~ivDa~q~~----g~~~id~~~~~~D---~~  219 (408)
T d1t3ia_         150 SFDLEHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSA----PHYPLDVQLIDCD---WL  219 (408)
T ss_dssp             SBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EE
T ss_pred             cccHHHhhhccCCCceEEEEecccccccccCc---HHHHhhhhhccCceeeeccceec----ccccccccccCCc---eE
Confidence            47899999999999999999999999999977   67788999999999999999987    5445566666554   78


Q ss_pred             EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh----------------------cccccCCchHHHHHHHHHh
Q 014631          249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY----------------------LNISSGPATFVQGAVPQIF  306 (421)
Q Consensus       249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l  306 (421)
                      +.|.+|++|.+|  +|++++++        +........                      +...++++.....++.+++
T Consensus       220 ~~s~hK~~gp~G--~g~l~v~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al  289 (408)
T d1t3ia_         220 VASGHKMCAPTG--IGFLYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAV  289 (408)
T ss_dssp             EEEGGGTTSCTT--CEEEEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHH
T ss_pred             EeccccccCCCC--ccccccch--------hhhhcCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHH
Confidence            889999976556  78888852        344433211                      0113567777788888888


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          307 KNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      +.....+++++.++..++.+++.+.+.+.+++.+...+    ..+..+.+.++..      +..+++.. |.++||.++.
T Consensus       290 ~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~~------~~~~v~~~-L~~~gI~v~~  362 (408)
T d1t3ia_         290 DYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGL------HASDVATM-VDQDGIAIRS  362 (408)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTB------CHHHHHHH-HHTTTEECBC
T ss_pred             HHHHHcCHHHHHHHHHHHHhHHhhhhccCccccccCCCccccCcceEEEEEeCCC------CHHHHHHH-HhhCCcEEec
Confidence            75445677888888899999999999988877633111    1123444555432      45666655 5788999998


Q ss_pred             CCCCC--------CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          383 GMAVG--------MKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       383 g~~~~--------~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      |..|.        .++.+|||++  ++.+|++++++.|+++++.+
T Consensus       363 G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L~~~~~~f  407 (408)
T d1t3ia_         363 GHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFF  407 (408)
T ss_dssp             SCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CcccccHHHHhhcCCccEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            87653        3578999998  89999999999999998764

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.97  E-value=1.4e-28  Score=230.84  Aligned_cols=329  Identities=14%  Similarity=0.145  Sum_probs=225.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCC----CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA---EFDCYSPS----VGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~~----~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      ..++|+.+...     +.|+.+.+++.+.++..   ....+...    .-+.++|+.+|+++      ++++++|++|+|
T Consensus         7 ~~~yld~~~~~-----~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~i~~~~g   75 (381)
T d1elua_           7 NKTYFNFGGQG-----ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITDN   75 (381)
T ss_dssp             TSEECCTTTCC-----CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEESS
T ss_pred             CCEEeeCCccc-----CCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHh------CCCcccEEEECC
Confidence            45678888644     67788888888876531   11111111    11345777777777      467899999999


Q ss_pred             HHHHHHHHHHHh-cCCCCeEEEcCCCCcchHH----HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631          118 CKQAIQVILTVL-ARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       118 ~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      +|++++.++.++ .++||+|+++++.|++...    .++..|+++..++.+.......+.+.+++.++++++++++++++
T Consensus        76 ~t~a~~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~  155 (381)
T d1elua_          76 VTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLL  155 (381)
T ss_dssp             HHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBC
T ss_pred             hHHHhhhcchhhhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhccccccccccccc
Confidence            999999999988 5899999999999986543    44557999999887544333334567778888999999999999


Q ss_pred             CCcccccCHHHHHHHHHHHHh----cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          193 NPCGNVFTYQQLQKIAEKARK----LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~----~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      |+||.++|   +++|.++|++    +++++++|.+|+.    |.....+..++.+   +++.|++|+++.| .++|++++
T Consensus       156 n~tG~~~~---~~~I~~l~~~~~~~~~~~~~vD~~~~~----g~~~~~~~~~~~D---~~~~s~~K~~~~p-~G~g~l~~  224 (381)
T d1elua_         156 WNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSA----GSLPLDFSRLEVD---YYAFTGHKWFAGP-AGVGGLYI  224 (381)
T ss_dssp             TTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTB----TTBCCCTTTSCCS---EEEEESSSTTCCC-TTCEEEEE
T ss_pred             ccccccch---hhHHHHHHhhccccccccccccccccc----ccccccccccccc---ccccccccccccc-chhhHHHh
Confidence            99999987   5566777776    4699999999986    3333344444433   7888999997543 45788887


Q ss_pred             eCCCcchhHHHHHHHHhhh-----------------------cccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHH
Q 014631          269 SDPSGILQELRIVDSIKGY-----------------------LNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDT  324 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~  324 (421)
                      ++.        ..+.+...                       ....++++.....++.++++..... ..+.+.++.+++
T Consensus       225 ~~~--------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~  296 (381)
T d1elua_         225 HGD--------CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQR  296 (381)
T ss_dssp             CTT--------TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             hHH--------HHHhcCcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhH
Confidence            542        11211100                       0012355666666666666542222 234556788889


Q ss_pred             HHHHHHHhhcCCCccccC--CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCH
Q 014631          325 ADICYDRIKEIPCITCPR--KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEP  400 (421)
Q Consensus       325 ~~~~~~~l~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~  400 (421)
                      ++++.+.|+++|++.++.  .|.++ ++++.++..     ....++. +.|+++||.++.   ++.++++|+|++  ++.
T Consensus       297 ~~~l~~~L~~~~~~~~~~~~~~~~~-~vsf~~~~~-----~~~~~i~-~~L~~~gi~v~~---~~~~~~lRis~~~~nt~  366 (381)
T d1elua_         297 SEFLWRGLNQLPHVHCLATSAPQAG-LVSFTVDSP-----LGHRAIV-QKLEEQRIYLRT---IADPDCIRACCHYITDE  366 (381)
T ss_dssp             HHHHHHHHHHSTTEEESCSSCCSSS-EEEEEECSS-----SCHHHHH-HHHHHTTEECEE---ETTTTEEEEECCTTCCH
T ss_pred             HHHHHHHHhcCCCeEecCCCCcccc-EEEEEcCCC-----CCHHHHH-HHHHhCCcEEEe---cCCCCEEEEecCCCCCH
Confidence            999999999998987442  23333 555555432     1334444 566889998864   234689999998  789


Q ss_pred             HHHHHHHHHHHHH
Q 014631          401 SALEEGLGRIKAF  413 (421)
Q Consensus       401 e~l~~~~~~l~~~  413 (421)
                      +|++++++.|+++
T Consensus       367 edid~ll~~l~e~  379 (381)
T d1elua_         367 EEINHLLARLADF  379 (381)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998763

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.96  E-value=5.5e-29  Score=231.57  Aligned_cols=332  Identities=14%  Similarity=0.079  Sum_probs=216.2

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ...++++......    ++..+...+++..        .+++..+.+++++..+++++.     ...+++++++|+++|+
T Consensus        19 ~~~i~~~~gl~~~----~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~-----~~~e~~~~~~~~~~a~   81 (366)
T d2aeua1          19 RDALYDLSGLSGG----FLIDEKDKALLNT--------YIGSSYFAEKVNEYGLKHLGG-----DENDKCVGFNRTSSAI   81 (366)
T ss_dssp             GGGCEECSSCCCC----CCCCHHHHHHHTS--------TTHHHHHHHHHHHHHHHHHTC-----CTTEEEEEESSHHHHH
T ss_pred             cchHhhhccCCCC----CCccHHHHHHHHH--------hcCchhhHHHHHHHHHHHccC-----CCccEEEEeCCHHHHH
Confidence            3456777644422    4566665554421        223334457888888888742     3457899999999999


Q ss_pred             HHHHHHhcCCCCeEEEc-CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631          123 QVILTVLARPGANILLP-KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY  201 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~-~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~  201 (421)
                      ..++.++..+++.|+++ .|+|.++...++..|++++  +.+       |+|++++.+++++++|++.+|+||++  ++.
T Consensus        82 ~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v--~~~-------d~e~l~~~i~~~tk~i~~~~p~n~~~--~~~  150 (366)
T d2aeua1          82 LATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYF--ESD-------KVGEILNKIDKDTLVIITGSTMDLKV--IEL  150 (366)
T ss_dssp             HHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEE--EES-------CHHHHHTTCCTTEEEEEECBCTTSCB--CCH
T ss_pred             HHHHHHhCCCCEEEEecCCCcchhHHHHHHhcCCeEE--CCC-------CHHHHHHhcCCCceEEEEEecCCCCc--CCH
Confidence            99999886444444554 5899999999999998754  221       78999999999999999999999853  455


Q ss_pred             HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631          202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV  281 (421)
Q Consensus       202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  281 (421)
                      +++++|+++|++||+++|+||+|+.+.+...........+.+   +++.|+||.  ++|+|+||++++        ++++
T Consensus       151 ~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~d---i~~~S~sK~--~~g~~~G~i~~~--------~~~i  217 (366)
T d2aeua1         151 ENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGAD---LVVTSTDKL--MEGPRGGLLAGK--------KELV  217 (366)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCS---EEEEETTSS--SSSCSCEEEEEE--------HHHH
T ss_pred             HHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcCce---EEEeccccc--ccccceeEEEec--------HHHH
Confidence            899999999999999999999998766543322222223322   778899997  468899999996        4677


Q ss_pred             HHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHH----HHHHHHHHhhcCCCccc-cCCCCceeEEEEecC
Q 014631          282 DSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD----TADICYDRIKEIPCITC-PRKPEGSMFVMVKLN  355 (421)
Q Consensus       282 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~-~~~~~~~~~~~~~~~  355 (421)
                      +.+..... ...+++++.+.++...|+......+++..+..++    +.+.+.......+++.. ...+.+..++|....
T Consensus       218 ~~~~~~~~~~g~~~~~~~~~a~~~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (366)
T d2aeua1         218 DKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVY  297 (366)
T ss_dssp             HHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEE
T ss_pred             HHHHHHHhcccccCCHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCC
Confidence            87776643 3456777888888777764322222222222222    22333333333333220 112344556655443


Q ss_pred             cccccCCCChHHHHHHHHhhcCeeEEeCCCC-CCCCeEEEEecC-CHH--HHHHHHHHHHHHHH
Q 014631          356 LSLLEGISDDMEFALQLAKEESVIVLPGMAV-GMKNWLRITFAI-EPS--ALEEGLGRIKAFCQ  415 (421)
Q Consensus       356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-~~~~~iRi~~~~-~~e--~l~~~~~~l~~~~~  415 (421)
                      ........++.+++.+|++++||.+.||..| +..+++|||++. +.+  +.+.+++.|.+.++
T Consensus       298 ~~~~~~~~~~~~~a~~Ll~~~gV~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK  361 (366)
T d2aeua1         298 KDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIK  361 (366)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHH
T ss_pred             cceeecccCHHHHHHHHHHhCCEEEEECCCCCCCCCEEEEeccccchhhCCHHHHHHHHHHHHH
Confidence            2110001135678888999999999999877 446789999983 222  23455555555554

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.96  E-value=1.3e-27  Score=221.33  Aligned_cols=331  Identities=18%  Similarity=0.148  Sum_probs=239.0

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      +++++||+..+   |.++..+|.++++..+.+++....      .++...-+.+|++.+|+|++        .+..++++
T Consensus        44 ~~~~~~FsSnd---YLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~g--------~e~all~~  112 (396)
T d2bwna1          44 KQDITVWCGND---YLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ--------KEAALVFS  112 (396)
T ss_dssp             EEEEEECSCSC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT--------CSEEEEES
T ss_pred             CeEEEEEEccc---ccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHhC--------CCceeeee
Confidence            46789999888   777888999999999999863221      12222235788999999873        46777888


Q ss_pred             CHHHHHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh---cc-CceEEEEeC
Q 014631          117 GCKQAIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA---DE-NTVAMVIVN  190 (421)
Q Consensus       117 g~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~---~~-~~~~i~~~~  190 (421)
                      +|..|+..++.++  ..++|.|+.+...|.+....++..+++++.++++       |++++++++   .+ +.+.|++..
T Consensus       113 sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-------d~~~l~~l~~~~~~~~~~~iv~eg  185 (396)
T d2bwna1         113 SAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  185 (396)
T ss_dssp             CHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cchHHHHHHHHHHhcccCCCceeehhhhhhccchhhhccccCceEeecc-------hHHHhhhHHhhhcccCceeEEEEe
Confidence            8888888888877  4688999999999999999999999999888753       455555443   33 344555666


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      ..+..|.+.|   +.+|.++|++||+++++||+|+..+++..+......++. ....++++||||+||..|   |+++++
T Consensus       186 vySmdGd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~  259 (396)
T d2bwna1         186 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  259 (396)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             eccCcccccc---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchh
Confidence            6788999966   788888999999999999999998876544333322221 223588999999999888   998885


Q ss_pred             CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631          270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG  346 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  346 (421)
                              +++++.+.....   ++.+.++....++.++++.......++.++.++.+.+++.+.+.+. |+. + .+..
T Consensus       260 --------~~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~-~~~~  328 (396)
T d2bwna1         260 --------ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-I-IDHG  328 (396)
T ss_dssp             --------HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCS
T ss_pred             --------HHHHHHHHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc-CCC-c-CCCC
Confidence                    456777765542   2234444555555555554333445666778888899999998876 766 3 3444


Q ss_pred             eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      +..+.+.+....     ....+..++++++||.+.+..++..   ...+|++++  ++++||+++++.|+++
T Consensus       329 spIvpv~ig~~~-----~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         329 SHIVPVVIGDPV-----HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             SSCEEEECCCHH-----HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCHH-----HHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHh
Confidence            555555564321     2456667778888999988776654   356999997  8999999999999886

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.2e-27  Score=221.17  Aligned_cols=329  Identities=13%  Similarity=0.092  Sum_probs=238.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA  116 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~  116 (421)
                      |++++||+..+   +.++..+|.++++..+++++...      ..++...-+.+|++.+|+|++        .+..++++
T Consensus        37 g~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~g--------~e~al~~~  105 (383)
T d1bs0a_          37 DRQYLNFSSND---YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG--------YSRALLFI  105 (383)
T ss_dssp             TEEEEECSCCC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT--------CSEEEEES
T ss_pred             CeEEEEEEccc---ccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhcC--------CCceEEec
Confidence            66788998876   66677899999999999986211      122333445899999999984        46788889


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---cCceEEEEeCCCC
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---ENTVAMVIVNPGN  193 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~~~~~i~~~~p~n  193 (421)
                      +++.++..++.++.+++|.|++....|.++...++..+.+++.++++       |++++++.+.   ++.++|++..+.+
T Consensus       106 SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hn-------d~~~le~~l~~~~~~~~~vv~e~v~s  178 (383)
T d1bs0a_         106 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHN-------DVTHLARLLASPCPGQQMVVTEGVFS  178 (383)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTT-------CHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             ccchhhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEecch-------HHHHHHHHhcccCCCceEEEecCCCC
Confidence            99999999999999999999999999999999999999998888753       6777777653   3556777778899


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCc
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG  273 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  273 (421)
                      ++|.+.|   +.+|.++|++||+++++||+|+.++++..+......++. ...+.+.|++|.++..|   |++.++    
T Consensus       179 ~~G~i~p---l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~-~~~~~~~t~~ka~g~~G---g~v~~~----  247 (383)
T d1bs0a_         179 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCS----  247 (383)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEEC----
T ss_pred             CCCcccc---hhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCC-ccccccccccccccccc---cccccc----
Confidence            9999966   677778889999999999999998776443332223332 23456779999998887   888885    


Q ss_pred             chhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEE
Q 014631          274 ILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV  350 (421)
Q Consensus       274 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~  350 (421)
                          .++.+.+.....   .+...++....++.++++.......+..++++.++..++.+.|.++ ++. + .+..+..+
T Consensus       248 ----~~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~-~-~~~~s~Ii  320 (383)
T d1bs0a_         248 ----STVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSAIQ  320 (383)
T ss_dssp             ----HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSSBC
T ss_pred             ----hhHHHHHHhhchhhhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc-CCc-c-CCCCCCEE
Confidence                345666654432   2334444554555555554334556677888889999999999987 665 3 23334444


Q ss_pred             EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      .+.+....     ...++...| .++||.+.+..++..   ...+|++++  +++|||+++++.|..+
T Consensus       321 ~v~~g~~~-----~a~~~~~~L-~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         321 PLIVGDNS-----RALQLAEKL-RQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             CEEEESHH-----HHHHHHHHH-HHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEECCHH-----HHHHHHHHH-HHCCceEEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence            44443211     234555555 667999988765543   346999998  8999999999998764

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5.7e-27  Score=219.55  Aligned_cols=334  Identities=15%  Similarity=0.137  Sum_probs=236.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP-------SVGILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      .|++++||+..+   |.++..+|.+++++.+++++... .++.       ..-+.++++.+|++++        .+.+++
T Consensus        43 dG~~~l~f~s~d---YLGl~~hp~v~~a~~~a~~~~g~-~~~~sr~~~g~~~~~~~lE~~lA~~~g--------~e~al~  110 (401)
T d1fc4a_          43 DGSHVINFCANN---YLGLANHPDLIAAAKAGMDSHGF-GMASVRFICGTQDSHKELEQKLAAFLG--------MEDAIL  110 (401)
T ss_dssp             TSCEEEECCCSC---TTSCTTCHHHHHHHHHHHHHHCS-CCCSCHHHHCCBHHHHHHHHHHHHHHT--------CSEEEE
T ss_pred             CCCEEEEEEccc---cccccCCHHHHHHHHHHHHHhCC-CcccceeeccCcHHHHHHHHHHHHhhc--------CCceEE
Confidence            478899998776   56677899999999999987432 2221       2335689999999983        567999


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh---cc---CceEEEE
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA---DE---NTVAMVI  188 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~---~~---~~~~i~~  188 (421)
                      +++|++|+..++.++.+++|.|++....|.++...+...+.+...++..       |.+++++++   ++   ...++++
T Consensus       111 ~~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~-------d~~~le~~~~~~~~~~~~~~liv~  183 (401)
T d1fc4a_         111 YSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANN-------DMQELEARLKEAREAGARHVLIAT  183 (401)
T ss_dssp             ESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTT-------CHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred             ecchhhhhHHHHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcCC-------ChHHHHHHHHHhhhcccCceEEEE
Confidence            9999999999999999999999999999999999999999988877643       444554433   22   2344444


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEE
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLV  267 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~  267 (421)
                      .+..+..|...+   ++++.++|++||+++|+||+|+.+.++..+.......+. .+..++++|++|.++  |...|++.
T Consensus       184 egv~s~~G~~~~---L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~g--g~~Gg~v~  258 (401)
T d1fc4a_         184 DGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTA  258 (401)
T ss_dssp             ESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEE
T ss_pred             cCCCCCCCchhh---hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccc--cCCccccc
Confidence            455667787744   888899999999999999999998877544332222221 223477899999974  33348888


Q ss_pred             eeCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          268 TSDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ++        .++++.+.....   ...+.++....++..+++.  ....++.+++++++.+++.+.+.+. ++. . .+
T Consensus       259 g~--------~~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~--~~~~~~~~~~l~~~~~~~~~~l~~~-g~~-~-~~  325 (401)
T d1fc4a_         259 AR--------KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEM--VEAGSELRDRLWANARQFREQMSAA-GFT-L-AG  325 (401)
T ss_dssp             EC--------HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCC-B-CC
T ss_pred             CC--------HHHHHHHHcCChhhhhcCCCCHHHHHHHHhhhcc--cccCHHHHHHHHHHHHHHHhhhccc-CCc-c-CC
Confidence            75        457776654432   2334555555555555543  2223567888999999999999887 665 3 23


Q ss_pred             CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ..+..+.+.+....     ...++...| .++||.+.+-.++..   ...+|++++  +++|||+++++.|+++.+++.
T Consensus       326 ~~~pIv~v~~~~~~-----~a~~~~~~L-~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~lg  398 (401)
T d1fc4a_         326 ADHAIIPVMLGDAV-----VAQKFAREL-QKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG  398 (401)
T ss_dssp             SSSSEEEEEEECHH-----HHHHHHHHH-HHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEEECCHH-----HHHHHHHHH-HHCCceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence            33444444454321     234566655 667999987655443   345999997  899999999999999998863

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.96  E-value=5.8e-28  Score=225.16  Aligned_cols=324  Identities=12%  Similarity=0.146  Sum_probs=205.2

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC---------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSP---------SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR  131 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~---------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~  131 (421)
                      ..++++.+++.+..+.....+|..         +.-+..+++.+|++++        .+++++|+|+++|+.+++.++++
T Consensus        13 ~l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g--------~e~~~~t~g~t~a~~~~~~al~~   84 (364)
T d2e7ja1          13 KLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG--------CDVARVTNGAREAKFAVMHSLAK   84 (364)
T ss_dssp             CCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT--------SSEEEEESSHHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHhC--------cCEEEEECcHHHHHHHHHHHHhC
Confidence            356778888876433211111211         1123567888888873        46899999999999999999999


Q ss_pred             CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC-----ceEEEEeCCCCCcccccCHHHHHH
Q 014631          132 PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN-----TVAMVIVNPGNPCGNVFTYQQLQK  206 (421)
Q Consensus       132 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~-----~~~i~~~~p~nptG~~~~~~~l~~  206 (421)
                      |||.|+++.++|.+....++..|++++.+|++...++.+|++++++.+++.     ++++++++|+||||.+.+   +++
T Consensus        85 ~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~  161 (364)
T d2e7ja1          85 KDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKK  161 (364)
T ss_dssp             TTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHH
T ss_pred             CCcEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chh
Confidence            999999999999998888999999999999877677889999999988543     356788999999999965   788


Q ss_pred             HHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh
Q 014631          207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG  286 (421)
Q Consensus       207 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  286 (421)
                      |+++|++||+++|+|++|+...    -......++.+   ++++|+||+|+.+| ++||+++++.        +.+.+..
T Consensus       162 I~~ia~~~~i~livD~a~~~g~----~~~~~~~~g~D---~~~~S~~K~~~~~g-~~g~l~~~~~--------~~~~~~~  225 (364)
T d2e7ja1         162 IAKVCSEYDVPLLVNGAYAIGR----MPVSLKEIGAD---FIVGSGHKSMAASG-PIGVMGMKEE--------WAEIVLR  225 (364)
T ss_dssp             HHHHHHTTTCCEEEECTTTBTT----BCCCHHHHTCS---EEEEEHHHHSSCCS-SCEEEEECTT--------TTTTTTC
T ss_pred             heeccccccchhhccccchhhh----hhhcccccccc---eeeeccccccCCCC-CEEEEEECHH--------HHHHHHh
Confidence            9999999999999999997632    22233333333   77889999988776 6899998642        2222211


Q ss_pred             hcc---------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCceeEEEEecCc
Q 014631          287 YLN---------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP-RKPEGSMFVMVKLNL  356 (421)
Q Consensus       287 ~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~~~~~~~~  356 (421)
                      ...         ...........++.+.+... .+.++...+. .++.+++.+.|.++ |+... ..|......++..+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~-~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~  302 (364)
T d2e7ja1         226 RSEKYKNKEVELLGCTARGATIITLMASFPHV-RERIKRWDEE-VEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAEV  302 (364)
T ss_dssp             BCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHH-HHHGGGHHHH-HHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECHH
T ss_pred             hccccCcccccccccccchhHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHc-CCeecCCCCCCcceEEEeccc
Confidence            110         01122222333333333221 1122222222 24555677777776 54422 123333333333322


Q ss_pred             cc--ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-cCCHHHHHHHHHHHHHHHHHh
Q 014631          357 SL--LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-AIEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       357 ~~--~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ..  .........+....+.+.++...   ..+....+|++. +.++|++++++++|+++++++
T Consensus       303 ~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~y  363 (364)
T d2e7ja1         303 LYEISKKAKGGRFFLYRELKSRKIHGI---KPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY  363 (364)
T ss_dssp             HHHHHHHSSSGGGHHHHHHHHTTEECS---CTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHHhhccchHHHHHHHhcCCcee---cCCCcceEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            10  00000122233444556666432   233356677764 488999999999999999876

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=2.8e-25  Score=207.70  Aligned_cols=334  Identities=13%  Similarity=0.095  Sum_probs=213.8

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP-------SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK  119 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~  119 (421)
                      |+|+.+..+     ++|+.+.+++.+.+.....+..+.       ...+.+.|+.+++++      ++++++|++++|+|
T Consensus         3 iyld~a~~~-----~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~------~~~~~~i~~~~~~T   71 (376)
T d1eg5a_           3 VYFDNNATT-----RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT   71 (376)
T ss_dssp             EECBTTTCC-----CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred             EEEECcccc-----cCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEEECCHH
Confidence            567666544     778999999999987631111000       011346688899998      57899999999999


Q ss_pred             HHHHHHHHH----hcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631          120 QAIQVILTV----LARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       120 ~al~~~~~~----l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      ++++.++..    ...+|+.|++....|+.+...   ++..|++++.+|++.  ++.+|+++++++++++++++++++++
T Consensus        72 ~~l~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~id~~~l~~~i~~~t~lv~is~v~  149 (376)
T d1eg5a_          72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN  149 (376)
T ss_dssp             HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred             HHHHhhhhcccccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCC--CCeECHHHHHHhcCCCceEEEEECCc
Confidence            999998864    346788898888888766444   455699999999864  34699999999999999999999999


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      |+||...+.+++.++.+. +..++++++|.+|+.    |.....+..++.+   ++++|++|++|.+|..+.  +++...
T Consensus       150 ~~tG~~~~~~~i~~~~~~-~~~~~~~~vD~~q~~----g~~~~d~~~~~~D---~~~~s~~K~~gp~G~~~l--~~~~~~  219 (376)
T d1eg5a_         150 NEVGTIQPVEDVTRIVKK-KNKETLVHVDAVQTI----GKIPFSLEKLEVD---YASFSAHKFHGPKGVGIT--YIRKGV  219 (376)
T ss_dssp             TTTCBBCCHHHHHHHHHH-HCTTCEEEEECTTTT----TTSCCCCTTTCCS---EEEEEGGGGTSCTTCEEE--EECTTS
T ss_pred             cccceeeeehhhhhhhhh-cccCceeEEEeeecc----ccccccccccCcc---ceecccceeecCCCceeE--EeccCc
Confidence            999999876665555432 344899999999987    4444445444443   889999999888885444  443221


Q ss_pred             cchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeE
Q 014631          273 GILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMF  349 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~  349 (421)
                      ...  + .......... ..+..+............. .................++.+.|....... .....  ....
T Consensus       220 ~~~--p-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~  294 (376)
T d1eg5a_         220 PIR--P-LIHGGGQERGLRSGTQNVPGIVGAARAMEI-AVEELSEAAKHMEKLRSKLVSGLMNLGAHI-ITPLEISLPNT  294 (376)
T ss_dssp             CCC--C-SBCSSCTTTTTBCSCCCHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHHHHHHHHHTTTCEE-CSCTTSBCTTE
T ss_pred             ccC--C-cccCCCCcccccCCcccchhhhhHHHHhhc-cccchhhhhhhhhhhhhhhccccccccccc-cccccccccce
Confidence            100  0 0000000000 1123344444444443332 123344445556666777777777653322 21111  1112


Q ss_pred             EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHHHHH
Q 014631          350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEEGLG  408 (421)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~~~~  408 (421)
                      ..+.++..      +...+.. .+.++||.+++|..+..                   .+.+|+|++  +++||++++++
T Consensus       295 ~~~~~~~~------~~~~~~~-~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~  367 (376)
T d1eg5a_         295 LSVSFPNI------RGSTLQN-LLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLK  367 (376)
T ss_dssp             EEEECTTC------CHHHHHH-HHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHH
T ss_pred             eeeccCCC------CHHHHHH-HHhhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHH
Confidence            23334321      3455544 56889999998865422                   136999998  79999999999


Q ss_pred             HHHHHHH
Q 014631          409 RIKAFCQ  415 (421)
Q Consensus       409 ~l~~~~~  415 (421)
                      .|+++++
T Consensus       368 ~L~~iv~  374 (376)
T d1eg5a_         368 KIEEILS  374 (376)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999986

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.9e-25  Score=205.99  Aligned_cols=332  Identities=14%  Similarity=0.117  Sum_probs=227.7

Q ss_pred             eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEcCCHHHHHH
Q 014631           47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKL-SPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~~~g~~~al~  123 (421)
                      +-|+-| |.     +.+++|++++..    ...+...+  ...+.++|+.++++++      + ++..|++++|||++++
T Consensus        21 ~l~~pG-P~-----~~~~~Vl~am~~----~~i~HRs~~f~~i~~ea~~~l~~llg------~~~~~~ii~~gsgT~a~~   84 (388)
T d1h0ca_          21 LLLGPG-PS-----NLPPRIMAAGGL----QMIGSMSKDMYQIMDEIKEGIQYVFQ------TRNPLTLVISGSGHCALE   84 (388)
T ss_dssp             EECSSS-CC-----CCCHHHHHHHTC----CCCCTTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESSCHHHHHH
T ss_pred             ccccCC-CC-----CCCHHHHHHhCc----CCCCCCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEcCcHHHHHH
Confidence            446555 33     567888887742    22222211  1124667777777763      3 3446899999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccCceEEEEeCCCCCcccccC
Q 014631          124 VILTVLARPGANILLPKPGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFT  200 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~  200 (421)
                      .++..++.+|+++++...++.+..  ..+...+.....+..+  .+..+|.+++++.+ ..+++++++++.+|.||++. 
T Consensus        85 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~-  161 (388)
T d1h0ca_          85 AALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKD--PGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQ-  161 (388)
T ss_dssp             HHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC-
T ss_pred             HHHHHhhccCCceeeecccceeeeeccccccccccccccccC--CccccchHHHHHHhccCCcceEEEeeeeecccccc-
Confidence            999999999999999998887653  3344456555555543  33457888887654 55788999999999999995 


Q ss_pred             HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631          201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI  280 (421)
Q Consensus       201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  280 (421)
                        ++++|.++|+++|+++++|.+++.    |.....+..++.+   +++.|.+|+++.++ .+|+++.+.        ..
T Consensus       162 --pi~~i~~~~~~~g~~~~vD~~qs~----g~~~~d~~~~~~D---~~~~s~~K~~~gp~-g~~~~~~~~--------~~  223 (388)
T d1h0ca_         162 --PLDGFGELCHRYKCLLLVDSVASL----GGTPLYMDRQGID---ILYSGSQKALNAPP-GTSLISFSD--------KA  223 (388)
T ss_dssp             --CCTTHHHHHHTTTCEEEEECTTTT----TTSCCCTTTTTCS---EEEEESSSTTCCCT-TCEEEEECH--------HH
T ss_pred             --CHHHHHHHhhcccccceecccccc----ccccccccccccc---eecccccccccCCC-ceEEEeecH--------HH
Confidence              488899999999999999999987    3333444444433   77888999976543 356666642        23


Q ss_pred             HHHHhhh------------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          281 VDSIKGY------------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       281 ~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      .+.+...                        .....+++.....++.+++....+.+++...++.+++.+++++.+... 
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~-  302 (388)
T d1h0ca_         224 KKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQAL-  302 (388)
T ss_dssp             HHHHTTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHhhhhccccccccccccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhc-
Confidence            3332211                        112235666666666666665445667888888888888999888876 


Q ss_pred             CccccC-CCCc--eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE-ec--CCHHHHHHHHHHH
Q 014631          337 CITCPR-KPEG--SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT-FA--IEPSALEEGLGRI  410 (421)
Q Consensus       337 g~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~-~~--~~~e~l~~~~~~l  410 (421)
                      ++.... .+..  ...+.+.++..     .+..++...|++++||.+..|......+.+||| ++  ++.||+++++++|
T Consensus       303 g~~~~~~~~~~rs~~i~~~~~p~~-----~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL  377 (388)
T d1h0ca_         303 GLQLFVKDPALRLPTVTTVAVPAG-----YDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEAL  377 (388)
T ss_dssp             TCCBSSCSGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred             CcccccCCHHHcCCeEEEEECCCC-----CCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHH
Confidence            443221 1111  12344556532     257788888888889999999776667899999 65  6889999999999


Q ss_pred             HHHHHHhhhcC
Q 014631          411 KAFCQRHAKQQ  421 (421)
Q Consensus       411 ~~~~~~~~~~~  421 (421)
                      ++++++++++|
T Consensus       378 ~~~L~~l~k~~  388 (388)
T d1h0ca_         378 RAALQHCPKKK  388 (388)
T ss_dssp             HHHHHHSCCC-
T ss_pred             HHHHHHhcccC
Confidence            99999999885

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=7.9e-26  Score=208.16  Aligned_cols=328  Identities=14%  Similarity=0.099  Sum_probs=206.0

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHH
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVI  125 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~  125 (421)
                      +|||..-.-+     .++|++.+|+.++...  ...|++.+...+|++.+|++++        .+++++++||++|+..+
T Consensus         1 ~~~~~~~~~t-----~p~p~v~~A~~~a~~g--~~~yg~~p~~~~le~~lA~~~G--------~~~~~~~~sGt~A~~~a   65 (343)
T d1m6sa_           1 MIDLRSDTVT-----KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGNQVS   65 (343)
T ss_dssp             CEECSCGGGC-----CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHH
T ss_pred             CcccccccCC-----CCCHHHHHHHHhhhcC--CcccCCCHHHHHHHHHHHHHHC--------CCeEEEeCCHHHHHHHH
Confidence            3677444322     2357899998765322  2357777778899999999973        35788999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------ceEE-EEeCCCCCc
Q 014631          126 LTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------TVAM-VIVNPGNPC  195 (421)
Q Consensus       126 ~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i-~~~~p~npt  195 (421)
                      ++++.++||.+++..+.|.++..   .+...+..+..++.   .....|++.+++.+...      +..+ +.+.++|++
T Consensus        66 l~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  142 (343)
T d1m6sa_          66 IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPG---KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSG  142 (343)
T ss_dssp             HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECE---ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTT
T ss_pred             HHHHhccCCceeccccccceeeecccccccccceeecccc---ccCccCHHHHHHhhhhhhcccccccccccccccccCC
Confidence            99999999999999998876533   33333444444432   23346888888877542      3333 444557899


Q ss_pred             ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631          196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL  275 (421)
Q Consensus       196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  275 (421)
                      |.+.+.+++++|.++|+++|+++++|+++..+............... . ...+.+.+|  +..|.+.|+++..      
T Consensus       143 ~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~--~~~g~~~~~~~~~------  212 (343)
T d1m6sa_         143 GRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY-A-DSVMFCLSK--GLCAPVGSVVVGD------  212 (343)
T ss_dssp             SBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHT-C-SEEEEESSS--TTCCSSCEEEEEC------
T ss_pred             ceecCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhccc-c-ccccccccc--ccccccccccccc------
Confidence            99999999999999999999999999999876533211111111111 1 122333333  3455566777764      


Q ss_pred             hHHHHHHHHhhhcc-cccCCchHHHHHHHHHhh-ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEe
Q 014631          276 QELRIVDSIKGYLN-ISSGPATFVQGAVPQIFK-NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVK  353 (421)
Q Consensus       276 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~  353 (421)
                        .+.......... ...+.+.....++..... ........    ...++...+.+.+.++.+.. ...|..++++++.
T Consensus       213 --~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~  285 (343)
T d1m6sa_         213 --RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLK----EDHENARFLALKLKEIGYSV-NPEDVKTNMVILR  285 (343)
T ss_dssp             --HHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHH----HHHHHHHHHHHHHHHHTCBC-CGGGCCSSEEEEE
T ss_pred             --HHHHhhhHhhCcccccccchhHHHHHhhhhhhhhhHHHHH----HHHHHHHHhhhHHHHhccCc-cCCCCCceEEEEE
Confidence              234443333322 112222222222221111 11112222    23344444455555443444 3356667888888


Q ss_pred             cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ++...    ....+++..| +++||.+.|..    .+++|++++  +++|+|++++++|+++++++
T Consensus       286 ~~~~~----~~a~~l~~~L-~~~Gi~v~~~~----~~~iRi~~~~~~t~edid~~v~~l~~v~~~~  342 (343)
T d1m6sa_         286 TDNLK----VNAHGFIEAL-RNSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  342 (343)
T ss_dssp             CTTSS----SCHHHHHHHH-HHHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCc----ccHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            86432    1456777665 67799998753    578999987  78999999999999999986

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=9.1e-24  Score=194.15  Aligned_cols=330  Identities=11%  Similarity=0.044  Sum_probs=211.3

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ  123 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~  123 (421)
                      +++++|.+.++.     +.+|+|++|+.++...+ ...|+......++|+.++++++.       +.++++|+|||+|++
T Consensus         2 ~~~~~f~s~n~~-----g~~P~v~~A~~~a~~~~-~~~~~~~~~~~~l~~~la~~~g~-------~~~v~f~~sGt~An~   68 (345)
T d1v72a1           2 PPALGFSSDNIA-----GASPEVAQALVKHSSGQ-AGPYGTDELTAQVKRKFCEIFER-------DVEVFLVPTGTAANA   68 (345)
T ss_dssp             CCCCBCSCGGGC-----CCCHHHHHHHHHTTSSC-CCSTTCSHHHHHHHHHHHHHHTS-------CCEEEEESCHHHHHH
T ss_pred             CCCcCcCCCCCC-----CCCHHHHHHHHHHhccC-ccccCCCHHHHHHHHHHHHHHCC-------CcEEEECCchHHHHH
Confidence            567788866543     56899999998875443 34677777778999999999842       467999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------ce-EEEEeCCCC
Q 014631          124 VILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------TV-AMVIVNPGN  193 (421)
Q Consensus       124 ~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~-~i~~~~p~n  193 (421)
                      .++..++.+++.+++....+.+..   ......+..+..++  +..+...+++.+++.+.+.      +. .++...+.|
T Consensus        69 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  146 (345)
T d1v72a1          69 LCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV--DGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQAT  146 (345)
T ss_dssp             HHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC--CCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC
T ss_pred             HHHHHHHhcCCccccccccceeeechhhHHHhcCccccccc--ccccccccHHHhhhhhcccccccccccceeeeeeccc
Confidence            999999888888888777765543   22334454444443  3344567999998877543      22 345556678


Q ss_pred             CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      ++|...+.++++++.++|++||+++++|+++....+.+.... ........ ......+.+|. +..+.  +........
T Consensus       147 ~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~--~~~~~~~~~  222 (345)
T d1v72a1         147 EVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAG-VDALSFGATKN-GVLAA--EAIVLFNTS  222 (345)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGT-CCEEEECCGGG-TCSSC--EEEEESSGG
T ss_pred             cccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhcccc-ccccccCcccc-ccccc--cccccchhh
Confidence            889999999999999999999999999999976543322111 11111111 12333344444 22222  333332211


Q ss_pred             cchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631          273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV  352 (421)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~  352 (421)
                      .      .............+.+.....++..... .......+...+..++...+.+.+.+++++. +..|..++++++
T Consensus       223 ~------~~~~~~~~~~~~~~~~~~~~aa~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~p~~~niv~~  294 (345)
T d1v72a1         223 L------ATEMSYRRKRAGHLSSKMRFLSAQIDAY-LTDDLWLRNARKANAAAQRLAQGLEGLGGVE-VLGGTEANILFC  294 (345)
T ss_dssp             G------HHHHHHHHHHTTCCCSSTHHHHHHHHHH-TSTTHHHHHHHHHHHHHHHHHHHHTTCTTEE-EESCCCSSEEEE
T ss_pred             h------hhhccccccccccccchhhHHhhhhHHH-HHHhhhhhhccchhhHHHHHHHHHHhcCCcE-eccCCCccEEEE
Confidence            1      1111111111222222222222222222 2234455566667777888888999999988 446777888888


Q ss_pred             ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631          353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF  413 (421)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~  413 (421)
                      .++          .+.+..| .++|+.+.++.  ..++.+|++++  +|+|||+++++.|+++
T Consensus       295 ~~~----------~~~~~~L-~~~gi~v~~~~--~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         295 RLD----------SAMIDAL-LKAGFGFYHDR--WGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             EEC----------HHHHHHH-HHTTCBCBCSS--SSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             EcC----------HHHHHHH-HHcCCCccccC--CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            775          2345555 55699886543  23678999997  7999999999999874

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.90  E-value=3.6e-22  Score=188.29  Aligned_cols=328  Identities=11%  Similarity=0.024  Sum_probs=214.7

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP--------SVGILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      .+++++|+.+...     +.|..+.+++.+.+.+... +...        ..-.+++|+.+|+++      ++++++|++
T Consensus        25 ~~~~iYLd~as~g-----~~p~~v~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~e~~R~~iA~ll------ga~~~ei~~   92 (404)
T d1qz9a_          25 PEGVIYLDGNSLG-----ARPVAALARAQAVIAEEWG-NGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVV   92 (404)
T ss_dssp             CTTCEECCTTTSC-----CCBTTHHHHHHHHHHTCCC-CCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEE
T ss_pred             CCCCEEcCCcccc-----cCCHHHHHHHHHHHHHHhc-ccCcccccchhHHHHHHHHHHHHHHHh------CCCCCcEEE
Confidence            5678999988755     6788899999998865321 1110        112346777777777      488999999


Q ss_pred             cCCHHHHHHHHHHHh------cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631          115 TAGCKQAIQVILTVL------ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI  188 (421)
Q Consensus       115 ~~g~~~al~~~~~~l------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~  188 (421)
                      |+++|++++.++...      ..+++.|++.+..|++....+...+.++...+...  ....+++.+++++++++++|.+
T Consensus        93 ~~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~T~lV~i  170 (404)
T d1qz9a_          93 TDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL--RLVDSPEELPQAIDQDTAVVML  170 (404)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE--EEESSGGGHHHHCSTTEEEEEE
T ss_pred             ecCchHHHHHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceec--cccccchhHHHhcCCCceEEEE
Confidence            999999998876532      36788888888888776555544444443333222  2235788999999999999999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631          189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT  268 (421)
Q Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  268 (421)
                      ++.+|.||..+|   +++|+++|+++|+.+++|.+|+.    |.....+...+.+   ++..|.+|+++.+...+|+++.
T Consensus       171 ~~v~~~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~----g~~~~~~~~~~~d---~~~~s~~K~~~~~~g~~g~~~~  240 (404)
T d1qz9a_         171 THVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAGAD---YAIGCTYKYLNGGPGSQAFVWV  240 (404)
T ss_dssp             ESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHTCS---EEEECSSSTTCCCTTCCCEEEE
T ss_pred             ecccccccceec---HHHHhccccccccceeEEeeccc----cccccccccccce---EEEEechhhcccCCceEEEEEe
Confidence            999999999966   88889999999999999999988    4334455555443   7778899987554444677776


Q ss_pred             eCCCcchhHHHHHHHHhh------------------------hcccccCCchHHHHHHHHHhhc---cchhHHHHHHHHH
Q 014631          269 SDPSGILQELRIVDSIKG------------------------YLNISSGPATFVQGAVPQIFKN---TKEDFFSKIVDIL  321 (421)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~  321 (421)
                      +...        .+.+..                        ......+++......+...+..   .....+.+....+
T Consensus       241 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  312 (404)
T d1qz9a_         241 SPQL--------CDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLAL  312 (404)
T ss_dssp             CTTT--------TTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred             chhh--------hhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence            5321        111100                        0001123344444443333332   2233444444444


Q ss_pred             HHHHHHHHHHhhcCCCccccCCCCc----eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec
Q 014631          322 RDTADICYDRIKEIPCITCPRKPEG----SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA  397 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~  397 (421)
                      ......+.+.+...+++.++ .|..    +..+.+.++        ++.++...| .++||.+...    .++.+|||++
T Consensus       313 ~~~~~~l~~~~~~~~~~~i~-~p~~~~~r~~~vsf~~~--------~~~~v~~~L-~~~gi~~~~r----~~~~lRiS~~  378 (404)
T d1qz9a_         313 TDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPRIMRFGFT  378 (404)
T ss_dssp             HHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTTEEEEECC
T ss_pred             HHHHHHHHHhhccCCCEEEE-CCCCccceeeEEEEecC--------CHHHHHHHH-HHCCCEEeec----CCCeEEEECC
Confidence            44444455555566788743 4432    234444454        356666665 6789976421    2468999984


Q ss_pred             ---CCHHHHHHHHHHHHHHHHH
Q 014631          398 ---IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       398 ---~~~e~l~~~~~~l~~~~~~  416 (421)
                         ++.+||+++++.|++++++
T Consensus       379 h~ynt~~did~~~~~L~~vl~~  400 (404)
T d1qz9a_         379 PLYTTFTEVWDAVQILGEILDR  400 (404)
T ss_dssp             TTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHh
Confidence               7899999999999999875

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=1.5e-22  Score=184.79  Aligned_cols=320  Identities=12%  Similarity=0.102  Sum_probs=191.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK  140 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~  140 (421)
                      +++|.+.+|+.+..... ...|++....+++|+.+++++      ++.+++|++|+|||++++.++..+.++++.+++..
T Consensus        11 g~~P~v~eAl~~~~~~~-~~~y~~~~~~~~lr~~ia~~~------g~~~~~v~~tsggtean~~a~~~~~~~~~~~~~~~   83 (340)
T d1svva_          11 GMHPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELL------ERPDADVHFISGGTQTNLIACSLALRPWEAVIATQ   83 (340)
T ss_dssp             CCCHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHH------TCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEET
T ss_pred             CCCHHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHh------CCCcceEEEcCCHHHHHHHHHHHHhhhcccccccc
Confidence            56889999999876553 347877777789999999998      46778999999999999999999999999999998


Q ss_pred             CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc------cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD------ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~------~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      +.|.++.......+.....+....... ..+.+...+...      .....++++...|.+|.+.+.+++..+.+.|+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (340)
T d1svva_          84 LGHISTHETGAIEATGHKVVTAPCPDG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEH  162 (340)
T ss_dssp             TSHHHHSSTTHHHHTTCCEEEECCTTS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHH
T ss_pred             ccceeeeecccccccceeeeecccccc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhcccccc
Confidence            888765433222222222222222222 123333322221      1223344555555577777889999999999999


Q ss_pred             CcEEEEcccccccccCCCC-cccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccC
Q 014631          215 GIMVISDEVYDHLTFGSTP-YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSG  293 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (421)
                      |.++++|+++......... ......... ...+...+.+|.  ..+.+.++.........     ..............
T Consensus       163 g~~~~~d~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  234 (340)
T d1svva_         163 GLYLFLDGARLASALSSPVNDLTLADIAR-LTDMFYIGATKA--GGMFGEALIILNDALKP-----NARHLIKQRGALMA  234 (340)
T ss_dssp             TCEEEEECTTHHHHHTSTTCCCCHHHHHH-HCSEEEEECTTT--TCSSCEEEEECSGGGCT-----THHHHHHHTTCCCT
T ss_pred             cceeeeeccceeeeecccccccccccccc-cceeeecCCccc--cccccccccccchhhhh-----hhhhhcccccCccc
Confidence            9999999999764433221 111111111 112333444454  33333444443221100     01111111111112


Q ss_pred             CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHH
Q 014631          294 PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLA  373 (421)
Q Consensus       294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  373 (421)
                      ......+++...++   ........++...++..+...|+.. |+. +..|..++++++.++.          +....++
T Consensus       235 ~~~~~~aa~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~-g~~-~~~p~~~~~v~~~~~~----------~~~~~l~  299 (340)
T d1svva_         235 KGWLLGIQFEVLMK---DNLFFELGAHSNKMAAILKAGLEAC-GIR-LAWPSASNQLFPILEN----------TMIAELN  299 (340)
T ss_dssp             TTHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCCSSSEECBEEEH----------HHHHHHT
T ss_pred             hhhHHHHHHHHHhh---hhHHHHHHHHHHHHHhhhHHHHhcC-CCe-eecCCCceEEEEeCCH----------HHHHHHH
Confidence            22223333333333   3445556667778888888888886 888 4467778888877642          3445554


Q ss_pred             hhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          374 KEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       374 ~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      ++..+...+.. ...++.+|+|++  +|+|||++++++|++
T Consensus       300 ~~~~~~~~~~~-~~~~~~vR~s~~~~~t~edid~~l~~l~~  339 (340)
T d1svva_         300 NDFDMYTVEPL-KDGTCIMRLCTSWATEEKECHRFVEVLKR  339 (340)
T ss_dssp             TTEECEEEEEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             Hhhhhhccccc-CCCCcEEEEECCCCCCHHHHHHHHHHHhc
Confidence            44222222222 223678999987  799999999999886

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.1e-21  Score=178.28  Aligned_cols=335  Identities=13%  Similarity=0.094  Sum_probs=221.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC-YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      .|..++||..|...... ...+|++.+|+.+++++..... +....-..++.+.++++.        ..+.++++++|++
T Consensus        39 dG~~ylD~~~g~~~~~l-Gh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~sGse  109 (404)
T d2byla1          39 EGRKYFDFLSSISAVNQ-GHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLF--------NYHKVLPMNTGVE  109 (404)
T ss_dssp             TCCEEEESSHHHHTCTT-CBTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred             CCCEEEEecCCHHHHhh-cCCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcc--------cccccccccCccc
Confidence            48899999887544322 2478999999999998743221 112222345556666654        3578999999999


Q ss_pred             HHHHHHHHhcC----------CCCeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHh
Q 014631          121 AIQVILTVLAR----------PGANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEA  177 (421)
Q Consensus       121 al~~~~~~l~~----------~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~  177 (421)
                      |+..+++...+          ....++....+|++....+......             +..+|.       -|++++++
T Consensus       110 A~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~  182 (404)
T d2byla1         110 AGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALER  182 (404)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECT-------TCHHHHHH
T ss_pred             cchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEecc-------cCHHHHHH
Confidence            99999977521          2247777888887654443322211             111221       27889999


Q ss_pred             hhccCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccc
Q 014631          178 LADENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKR  255 (421)
Q Consensus       178 ~~~~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  255 (421)
                      .+.++..+.++..| +...|. ..+++.+++|.++|++||+++|+||+++++.+.|..+ ....++...+++   +++|.
T Consensus       183 ~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-a~~~~gv~PDi~---~~gK~  258 (404)
T d2byla1         183 ALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLGKA  258 (404)
T ss_dssp             HHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGG
T ss_pred             hcCCCCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccc-hhhhcCCCCCEE---EECch
Confidence            88765556667778 555674 4677889999999999999999999999987777643 333444333344   67899


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE  334 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  334 (421)
                      ++..++++|.++++        .++.+.+..... .+.+.++++++++.++|+...+..   ..++.+++.+++.+.|.+
T Consensus       259 l~gG~~p~~av~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~l~~  327 (404)
T d2byla1         259 LSGGLYPVSAVLCD--------DDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEEN---LAENADKLGIILRNELMK  327 (404)
T ss_dssp             GGTTSSCCEEEEEC--------HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHT
T ss_pred             hhCCCccceeeeec--------hhhhhccCCCCCCcCCCcCHHHHHHHHHHHHHHHhcC---chhhhhHhhHHHHHHHHh
Confidence            76544899999995        356665554432 356788999999999887643322   334445555666777665


Q ss_pred             C--CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631          335 I--PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI  410 (421)
Q Consensus       335 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l  410 (421)
                      +  +.+..+ . ..|++..+.+....   ......+..++ .++||++.+..    .+.+|++++  .++++|++++++|
T Consensus       328 l~~~~i~~v-R-g~Gl~~~i~~~~~~---~~~~~~~~~~l-~~~Gvl~~~~~----~~~i~l~PpL~it~~~id~~~~~l  397 (404)
T d2byla1         328 LPSDVVTAV-R-GKGLLNAIVIKETK---DWDAWKVCLRL-RDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEII  397 (404)
T ss_dssp             SCTTTEEEE-E-EETTEEEEEECCCS---SCCHHHHHHHH-HHTTEECEEEE----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             hccccceee-e-ecccEEEEEEecCC---chhHHHHHHHH-HhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHH
Confidence            4  112211 1 22445555554321   12455666665 56799998742    368999987  7899999999999


Q ss_pred             HHHHHHh
Q 014631          411 KAFCQRH  417 (421)
Q Consensus       411 ~~~~~~~  417 (421)
                      ++++.++
T Consensus       398 ~~al~~f  404 (404)
T d2byla1         398 NKTILSF  404 (404)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHcC
Confidence            9998753

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=9e-21  Score=178.37  Aligned_cols=344  Identities=13%  Similarity=0.104  Sum_probs=215.9

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|..++||..|.-....+ ..+|.+.+++.+++++.....+. ....++..+ +++.+....  +...+.+++++++++
T Consensus        40 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~-~~~~~~~~~-l~~~l~~~~--~~~~~~v~f~~sGse  114 (429)
T d1s0aa_          40 SDGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFG-GITHAPAIE-LCRKLVAMT--PQPLECVFLADSGSV  114 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCS-SEECHHHHH-HHHHHHHHS--CTTCCEEEEESSHHH
T ss_pred             CCCCEEEECcccHHHHhhc-CCcHHHHHHHHHHHHhcCCcccC-CccchHHHH-HHHHHHhhh--ccCcceeeecccccc
Confidence            3588999998886543333 47899999999999874321111 111222222 233333222  234578999999999


Q ss_pred             HHHHHHHHhc-------CCCCeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCC-CC---ccCCHHHH
Q 014631          121 AIQVILTVLA-------RPGANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPE-KG---WEVDLDGL  175 (421)
Q Consensus       121 al~~~~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~-~~---~~~d~e~l  175 (421)
                      |+..+++...       .+..+|+....+|++....+.....              .....|.... ..   ..-+++++
T Consensus       115 A~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (429)
T d1s0aa_         115 AVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGF  194 (429)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHH
T ss_pred             chhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhh
Confidence            9998887653       2336899999999886544432221              1111111110 01   11234455


Q ss_pred             Hhhhc--cCceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631          176 EALAD--ENTVAMVIVNP--GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG  250 (421)
Q Consensus       176 ~~~~~--~~~~~i~~~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  250 (421)
                      ++.+.  .+..+.++..|  ++..|. ..|++.+++|.++|++||+++|+||+++++.+.|... ....++...+++   
T Consensus       195 ~~~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-~~~~~~v~PDi~---  270 (429)
T d1s0aa_         195 ARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL---  270 (429)
T ss_dssp             HHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---
T ss_pred             hhhhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccccccccccc-ccccceeccccc---
Confidence            44332  24455567777  355555 5688999999999999999999999999997777543 333444433444   


Q ss_pred             ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631          251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT  324 (421)
Q Consensus       251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (421)
                      +++|.++..+.++|.++++        +++.+.+....      ..+.+.++++.+++.+.|+...++.+   ..+.+++
T Consensus       271 ~~gK~l~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~~~~---~~~~~~~  339 (429)
T d1s0aa_         271 CLGKALTGGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDW---QQQVADI  339 (429)
T ss_dssp             EECGGGGTSSSCCEEEEEC--------HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHH---HHHHHHH
T ss_pred             ccccccccccccccchhhH--------HHHHhccCCCCCcceeecCCCCCCcccchhhhccccccccccc---cchhhHH
Confidence            4679976666899999985        46777665421      23567889999999999876433322   3334444


Q ss_pred             HHHHHHHhhc---CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631          325 ADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE  399 (421)
Q Consensus       325 ~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~  399 (421)
                      .+++.+.|++   .+.+..+ . ..|++..+++..+.     ....+.. .+.++|+++.+.     .+.+|++++  .+
T Consensus       340 g~~l~~~L~~l~~~~~v~~v-r-g~Gl~~~~e~~~~~-----~~~~~~~-~~~~~Gl~~~~~-----g~~i~~~Ppl~it  406 (429)
T d1s0aa_         340 EVQLREQLAPARDAEMVADV-R-VLGAIGVVETTHPV-----NMAALQK-FFVEQGVWIRPF-----GKLIYLMPPYIIL  406 (429)
T ss_dssp             HHHHHHHHGGGGGCTTEEEE-E-EETTEEEEEESSCB-----CHHHHHH-HHHHTTEECCCB-----TTEEEECCCTTCC
T ss_pred             HHHHHHHHHHhccCCceEEE-e-ecccEEEEEecCcc-----cHHHHHH-HHHHCCcEEEec-----CCEEEEeCCcCCC
Confidence            4455555543   3344312 1 22456666775432     3445544 456779998764     368999976  79


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 014631          400 PSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       400 ~e~l~~~~~~l~~~~~~~  417 (421)
                      +++|++++++|++++++.
T Consensus       407 ~~eid~~~~~l~~al~e~  424 (429)
T d1s0aa_         407 PQQLQRLTAAVNRAVQDE  424 (429)
T ss_dssp             HHHHHHHHHHHHHHTSSG
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999998764

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=8.3e-21  Score=179.05  Aligned_cols=357  Identities=15%  Similarity=0.135  Sum_probs=220.7

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.+++||..|...... ...+|.+.+++.+++++........  ...+.+..+++.+.+..+ +-..+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse  112 (425)
T d1sffa_          37 VEGREYLDFAGGIAVLNT-GHLHPKVVAAVEAQLKKLSHTCFQV--LAYEPYLELCEIMNQKVP-GDFAKKTLLVTTGSE  112 (425)
T ss_dssp             TTCCEEEESSHHHHTCTT-CBTCHHHHHHHHHHTTTCSCCCTTT--EECHHHHHHHHHHHHHSS-CSSCEEEEEESSHHH
T ss_pred             CCCCEEEEcCcCHHhhcc-cCCcHHHHHHHHHHHhhcCCccccc--ccCcHHHHHHHHHHhhhh-hcccceeeeeccccc
Confidence            348899999887544322 2478999999999998743211111  112344445555554332 112357999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-Cce-------------eEeeecc--CCCCccC----CHHHHHh-
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHT-RLE-------------IRHFDLL--PEKGWEV----DLDGLEA-  177 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~--~~~~~~~----d~e~l~~-  177 (421)
                      |+..+++...  ....+|+....+|++....+... |..             ....+.+  ..+....    +.+++.. 
T Consensus       113 A~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (425)
T d1sffa_         113 AVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN  192 (425)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHh
Confidence            9999988653  12368999999999876555432 210             1111110  0111000    1111111 


Q ss_pred             hhccCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccc
Q 014631          178 LADENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKR  255 (421)
Q Consensus       178 ~~~~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  255 (421)
                      ....+..+.++..| +...|. ..+++.++.|.++|++||+++|+||+++++.+.|... ....++....++   +++|.
T Consensus       193 ~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~-a~~~~gv~PDi~---~~gK~  268 (425)
T d1sffa_         193 DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVAPDLT---TFAKS  268 (425)
T ss_dssp             TCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSCCSEE---EECGG
T ss_pred             cccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhh-HHHhcCCCccce---ecccc
Confidence            11233455667777 444665 4678899999999999999999999999977666543 223333333333   57899


Q ss_pred             cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhh
Q 014631          256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      + ..|+++|.++++        +++++.+..... .+.+.++++++++.++|+...+ ...++..+.-...++.+.+.++
T Consensus       269 l-~gG~P~~av~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~  339 (425)
T d1sffa_         269 I-AGGFPLAGVTGR--------AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAE  339 (425)
T ss_dssp             G-GTSSCCEEEEEE--------HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCcceEEEEEc--------HHHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHh
Confidence            6 557899999996        356666554432 4568889999999999886443 3344444444555566666666


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLG  408 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~  408 (421)
                      +.|.+..+ .. .|.+..+.+.........+   ...+..+ +.++||++.++..  ..+.+|++++  .++++|+++++
T Consensus       340 ~~~~v~~v-rg-~Gl~~~i~f~~~~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~g~--~~n~i~~~PpL~it~~eid~~l~  414 (425)
T d1sffa_         340 KHPEIGDV-RG-LGAMIAIELFEDGDHNKPDAKLTAEIVAR-ARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLE  414 (425)
T ss_dssp             TCTTEEEE-EE-ETTEEEEEEBGGGCTTSBCHHHHHHHHHH-HHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHH
T ss_pred             hCCceEEE-Ec-cccEEEEEEeccCccCCccHHHHHHHHHH-HHHCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHH
Confidence            66544322 22 2445556553321111111   1344444 4667999987543  2467999987  79999999999


Q ss_pred             HHHHHHHHhhh
Q 014631          409 RIKAFCQRHAK  419 (421)
Q Consensus       409 ~l~~~~~~~~~  419 (421)
                      +|+++++++++
T Consensus       415 ~l~~al~eikk  425 (425)
T d1sffa_         415 IISQCFDEAKQ  425 (425)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhcC
Confidence            99999998864

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.88  E-value=6.7e-21  Score=176.64  Aligned_cols=326  Identities=13%  Similarity=0.101  Sum_probs=206.4

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCc--EEEcCCHHHHHHHHHHHhcCCCCeE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYS--PSVGILPARRAIADYLNSELPCKLSPDD--VYLTAGCKQAIQVILTVLARPGANI  136 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l~~~gd~V  136 (421)
                      +.++.|++|+.+.    ..+.+.  ......+.|+.++++++      +++++  +++++|+|++++.++..+..+++.+
T Consensus        10 ~~~~~V~~A~~~~----~~~~~~~~~~~~~~~~r~~l~~l~~------~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~   79 (361)
T d1m32a_          10 TTSRTVKEAMLFD----SCTWDDDYNIGVVEQIRQQLTALAT------ASEGYTSVLLQGSGSYAVEAVLGSALGPQDKV   79 (361)
T ss_dssp             CCCHHHHHTTCCC----CCTTSHHHHTTTHHHHHHHHHHHHC------SSSSEEEEEEESCHHHHHHHHHHHSCCTTCCE
T ss_pred             CCCHHHHHHhhhh----ccCCCcHHHHHHHHHHHHHHHHHhC------CCCCCEEEEECCCHHHHHHHHHHHhhhhcccc
Confidence            5678888776432    222222  12345789999999983      55554  7788999999999999998888877


Q ss_pred             EEcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          137 LLPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       137 l~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      ++....+.+  ....+...+.....+..........+.+.......++++.+.+++.+|.||...+   +++|.++|+++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~---i~~i~~~~~~~  156 (361)
T d1m32a_          80 LIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAHRY  156 (361)
T ss_dssp             EEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHH
T ss_pred             ceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhccCccceEEEeeecccccchh---hhhhhhhhccc
Confidence            777655543  2333444555555554433333223344445556778999999999999999965   78888999999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCC---------cchhHHH-HHHH
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPS---------GILQELR-IVDS  283 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~---------~~~~~~~-~~~~  283 (421)
                      |+++++|.+++.    |.....+..++.+   +++.|.+|++++ +|  +|++++++..         ....... ....
T Consensus       157 g~~~~vDa~qs~----G~~~~d~~~~~~D---~~~~s~~K~l~gp~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T d1m32a_         157 GKTYIVDAMSSF----GGIPMDIAALHID---YLISSANKCIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWRC  227 (361)
T ss_dssp             TCEEEEECTTTT----TTSCCCTTTTTCS---EEEEESSSTTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHHH
T ss_pred             ceeeEeeccccc----Ccccccccccccc---eEEeeecccccCCCC--ceEEEechhhhhhhccccccccccchhhhcc
Confidence            999999999987    4334445555443   788899999754 46  7888876310         0000000 0011


Q ss_pred             Hhhh-cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEEecCcccc
Q 014631          284 IKGY-LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMVKLNLSLL  359 (421)
Q Consensus       284 ~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~~~~~~  359 (421)
                      .... .....+++.....++...+.... +.......++.+...+.+.+.++.. ++.....+.  ......+.++... 
T Consensus       228 ~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~rs~~v~~~~~p~~~-  305 (361)
T d1m32a_         228 MEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDP-  305 (361)
T ss_dssp             HHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCT-
T ss_pred             ccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhc-CCcccCChhhcCCcEEEEECCCCC-
Confidence            1111 11234566666666666664422 3345556667777778888888776 544222221  1123334454321 


Q ss_pred             cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c-CCHHHHHHHHHHHHHHH
Q 014631          360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A-IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~-~~~e~l~~~~~~l~~~~  414 (421)
                        ..+..+++.. +.++|+.+.+|.. ..++.+||++ + ++++|+++++++|++++
T Consensus       306 --~~~~~~~~~~-l~~~gi~i~~G~~-~~~~~~Ris~~g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         306 --QYRFSEFYRR-LKEQGFVIYPGKV-SQSDCFRIGNIGEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             --TCCHHHHHHH-HHHTTEECEECCC-SSSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             --CCCHHHHHHH-HHHCCcEEECCCc-CCCCEEEEeCCCCCCHHHHHHHHHHHHHHc
Confidence              1134566655 5778999988854 3367899995 3 78999999999999875

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=1.1e-20  Score=175.38  Aligned_cols=330  Identities=18%  Similarity=0.192  Sum_probs=219.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|++++|+..|.-....+ ..+|.+.+++.+++++.....+  .. ..+.+..+++.+....+  ...+.++++++|++|
T Consensus        35 dG~~ylD~~~g~~~~~lG-h~hp~v~~a~~~~~~~~~~~~~--~~-~~~~~~~la~~l~~~~~--~~~~~v~f~~sGseA  108 (387)
T d1vefa1          35 EGNEYIDCVGGYGVANLG-HGNPEVVEAVKRQAETLMAMPQ--TL-PTPMRGEFYRTLTAILP--PELNRVFPVNSGTEA  108 (387)
T ss_dssp             TSCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCCCCCT--TS-CCHHHHHHHHHHHHTSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEEcchhHHhhhhc-CCcHHHHHHHHHHHHhhccccc--cc-CCchHHHHHHHhhhhcc--ccceeeccccCchHH
Confidence            488999997764332222 4789999999999987422111  11 23555566665554322  223579999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631          122 IQVILTVLA--RPGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKGWEVDLDGLEALADENTVAM  186 (421)
Q Consensus       122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i  186 (421)
                      +..+++...  ....+|+....+|++....+...+.             ++..+|.       -|++.+++.+.++..+ 
T Consensus       109 ~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~~~~~~iAa-  180 (387)
T d1vefa1         109 NEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEETAA-  180 (387)
T ss_dssp             HHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTTEEE-
T ss_pred             HHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-------CCHHHHHHhcCCCeEE-
Confidence            999998753  2336899999999887544443321             1222221       2788999988766554 


Q ss_pred             EEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631          187 VIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG  264 (421)
Q Consensus       187 ~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  264 (421)
                      ++..| +...|.. .+++.++++.++|++||+++|.||+++++.+.|... ....++....++   +++|.+ ..|..++
T Consensus       181 vi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-~~~~~~v~PDi~---~~gK~l-~gG~~~~  255 (387)
T d1vefa1         181 VILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKAL-GGGVPLG  255 (387)
T ss_dssp             EEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGG-GTTSSCE
T ss_pred             EEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCc-ccccCCcCCcee---eecccC-CCCcccc
Confidence            45677 4556754 678889999999999999999999999987777543 333334333344   567995 5678888


Q ss_pred             EEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--CCcccc
Q 014631          265 WLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--PCITCP  341 (421)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~~  341 (421)
                      .+++.        .++++.+.... ..+.+.++++++++.+.|+...+   .+..++.+++.+++.+.|+++  +.+..+
T Consensus       256 ~~~~~--------~~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~---~~~~~~v~~~g~~l~~~L~~l~~~~v~~v  324 (387)
T d1vefa1         256 VAVMR--------EEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREV  324 (387)
T ss_dssp             EEEEE--------HHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred             ccccc--------eeeeeccccCCccccCCCCcchhhhcccchhhccc---ccccchHhhhhHHHHHHHHhcCCCceEEE
Confidence            88875        34555544443 23567899999999998875332   233445556666777777765  222211


Q ss_pred             CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                        ...|++..++++..       ....+..++.++|+.+.+..    .+.+|++++  .++++|++++++|++++
T Consensus       325 --rg~Gl~~~ie~~~~-------~~~~~~~~~~~~g~l~~~~g----~~~ir~~Ppl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         325 --RGMGLMVGLELKEK-------AAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             --EEETTEEEEEESSC-------SHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             --eecceEEEEEEeCC-------chHHHHHHHHHCCCeEEecC----CCEEEEECCccCCHHHHHHHHHHHHHHh
Confidence              12245666777642       33445556677788877643    467899876  79999999999999986

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.88  E-value=1.4e-20  Score=176.09  Aligned_cols=345  Identities=15%  Similarity=0.129  Sum_probs=214.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|+.++||..|......+ ..+|.+.+|+++++++...   ..........+.+++.+....    ..+.+.++.+++++
T Consensus        37 dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~sgs~a  108 (404)
T d1z7da1          37 NDKRYYDFLSAYSSVNQG-HCHPNILNAMINQAKNLTI---CSRAFFSVPLGICERYLTNLL----GYDKVLMMNTGAEA  108 (404)
T ss_dssp             TCCEEEESSHHHHTTTTC-BTCHHHHHHHHHHHTTCSC---CCTTSEEHHHHHHHHHHHHHH----TCSEEEEESSHHHH
T ss_pred             CCCEEEEccccHHHHhhh-cCcHHHHHHHHHHHHhCCC---cccccchHHHHHHHHhhhhcc----ccceeeeeccccch
Confidence            488999998775432222 3689999999999987422   111111222333333333322    35678999999999


Q ss_pred             HHHHHHHhc----------CCCCeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCC--ccCCHHHHHhhhccCceE
Q 014631          122 IQVILTVLA----------RPGANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKG--WEVDLDGLEALADENTVA  185 (421)
Q Consensus       122 l~~~~~~l~----------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~e~l~~~~~~~~~~  185 (421)
                      +..+++...          .....++....+|++.............    ..|..+...  ..-+.+.++..+.+...+
T Consensus       109 ~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA  188 (404)
T d1z7da1         109 NETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVC  188 (404)
T ss_dssp             HHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTTEE
T ss_pred             HHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccccchHHHHHHHhcCCCEE
Confidence            998886542          1224688888888876444332221110    011000000  012567777777666666


Q ss_pred             EEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631          186 MVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL  263 (421)
Q Consensus       186 i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  263 (421)
                      .++..| +...|.. .+++.+++|.++|++||+++|+||+++++.+.|..+ ....++....++   +++|.++..+..+
T Consensus       189 avi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~-~~e~~gv~PDiv---t~gK~l~gG~~p~  264 (404)
T d1z7da1         189 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---LLGKALSGGHYPI  264 (404)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGGTTSSCC
T ss_pred             EEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccc-cccccCCCCCEE---EEcccccCCCCCc
Confidence            677788 5556765 567889999999999999999999999887666543 334444433344   6789976555899


Q ss_pred             EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631          264 GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCP  341 (421)
Q Consensus       264 G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  341 (421)
                      |.++++        .++.+.+..... .+.+.++++++++.++|+... +...+...+.-....+.+.+.+++.+.+..+
T Consensus       265 ~~v~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v  336 (404)
T d1z7da1         265 SAVLAN--------DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDV  336 (404)
T ss_dssp             EEEEEC--------HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred             ccccch--------HHHHccCCCCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEE
Confidence            999985        356665555432 345789999999999887533 3444455555555666677777776544322


Q ss_pred             CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                       . ..|.+..+.+....    ....++..++ .++||.+.+..    .+.+|+.++  .++++|++++++|+++++++
T Consensus       337 -r-g~Gl~~~i~~~~~~----~~~~~~~~~l-~~~Gl~~~~~~----~~~ir~~Ppl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         337 -R-GKGLLCAIEFKNEL----VNVLDICLKL-KENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             -E-EETTEEEEEECTTT----CCHHHHHHHH-HHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             -E-eeCcEEEEEEcCCc----ccHHHHHHHH-HhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHHhh
Confidence             2 23456667776432    1344555554 66799987643    467999876  79999999999999999875

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=5.3e-20  Score=173.97  Aligned_cols=359  Identities=14%  Similarity=-0.023  Sum_probs=235.6

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC---CcEEEcCCHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP---DDVYLTAGCK  119 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~---~~i~~~~g~~  119 (421)
                      |.+-.||...-.+     ..++.+.+.+.+.+++. ..++...+...+++..+.+++.+.+|.+...   ..-.+|+|||
T Consensus        52 g~~~~n~asf~~t-----~~~~~~~~l~~~~~~~N-~~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgS  125 (450)
T d1pmma_          52 GNARQNLATFCQT-----WDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSS  125 (450)
T ss_dssp             CCGGGBCSCCSCC-----CCCHHHHHHHHHTTTCB-TTCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHH
T ss_pred             CCccccccccccC-----CCCHHHHHHHHHHHhcC-CCCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchH
Confidence            4444566554322     34677888888877653 2233333345799999999999988865322   2248899999


Q ss_pred             HHHHHHHHHhc-----------CCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631          120 QAIQVILTVLA-----------RPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV  187 (421)
Q Consensus       120 ~al~~~~~~l~-----------~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~  187 (421)
                      +|+.+.+.+..           .++ ..++++...|+++..+++..|++++.++.++ +++.+|++++++.+++++.+|+
T Consensus       126 eA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~Vv  204 (450)
T d1pmma_         126 EACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVV  204 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecC-CCCcCcHHHHHHHhhhCceEEE
Confidence            99998876542           122 3577788899999999999999999999865 3478999999999999999999


Q ss_pred             EeCCCCCcccccCHHHHHHHHH---HHHhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAE---KARKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~---~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      .+.+++.||.+=|.+.+.+|++   +|+++|+++++|.+|+++..  ..........+.  .-..+..|.||++ .....
T Consensus       205 ~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~--~aDSi~~s~HK~~-~~p~g  281 (450)
T d1pmma_         205 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLP--RVKSISASGHKFG-LAPLG  281 (450)
T ss_dssp             CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTST--TEEEEEEETTTTT-CCCSS
T ss_pred             eeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhccc--ceeEeecChhhcc-CCCCC
Confidence            9999999999977665555543   46789999999999987541  111110111111  1124566899984 44566


Q ss_pred             EEEEEeeCCCcchhHHHHHHHHhh--------hccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh
Q 014631          263 LGWLVTSDPSGILQELRIVDSIKG--------YLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI  332 (421)
Q Consensus       263 ~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  332 (421)
                      +||++.+++....      ..+..        ....  .++-+.....++...+......++.+..++..++.+++.+.|
T Consensus       282 ~g~l~~r~~~~~~------~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~L  355 (450)
T d1pmma_         282 CGWVIWRDEEALP------QELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEI  355 (450)
T ss_dssp             CEEEEESSGGGSC------GGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEecChhhhh------hhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999997643211      11100        0001  111122233333444444456888999999999999999999


Q ss_pred             hcCCCccccC--CCCce-eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC---CCCCeEEEEec--CCHHHHH
Q 014631          333 KEIPCITCPR--KPEGS-MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV---GMKNWLRITFA--IEPSALE  404 (421)
Q Consensus       333 ~~~~g~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---~~~~~iRi~~~--~~~e~l~  404 (421)
                      ++++++.++.  .|..+ ..+.+++......+ .+..++.. .|+++|..|......   .....+|+.+.  +++++++
T Consensus       356 ~~~~~~el~~~~~p~~~l~~V~Fr~~~~~~~~-~~~~~l~~-~L~~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~d  433 (450)
T d1pmma_         356 AKLGPYEFICTGRPDEGIPAVCFKLKDGEDPG-YTLYDLSE-RLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAE  433 (450)
T ss_dssp             HTTSCEEEEEECCTTTBSSEEEEEECTTCCCS-SCHHHHHH-HHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHH
T ss_pred             HhCCCeEEEeCCCCCCceEEEEEecCCcccCC-CCHHHHHH-HHHHcCCeeeccCcCCCcCCcEEEEEEccCCCCHHHHH
Confidence            9998877432  22222 23455554322211 13445554 457789766432211   11346999987  7899999


Q ss_pred             HHHHHHHHHHHHhhh
Q 014631          405 EGLGRIKAFCQRHAK  419 (421)
Q Consensus       405 ~~~~~l~~~~~~~~~  419 (421)
                      ++++.|+++++++++
T Consensus       434 ~lv~dl~~~v~~l~~  448 (450)
T d1pmma_         434 LLLEDYKASLKYLSD  448 (450)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998875

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.87  E-value=7.2e-21  Score=177.49  Aligned_cols=319  Identities=12%  Similarity=0.152  Sum_probs=212.0

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL  138 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~  138 (421)
                      +.+++|++||..    ...+.++..  ..+.++|+.++++++.     -+...|++++|||++++.++..+..+|+++++
T Consensus        28 ~v~~~Vl~am~~----~~~~hr~~ef~~i~~~~r~~l~~ll~~-----~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~~~   98 (377)
T d1vjoa_          28 NAHPSVLQAMNV----SPVGHLDPAFLALMDEIQSLLRYVWQT-----ENPLTIAVSGTGTAAMEATIANAVEPGDVVLI   98 (377)
T ss_dssp             CCCHHHHHHHSS----CCCCTTSHHHHHHHHHHHHHHHHHHTC-----CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCHHHHHHhCc----CCCCCCCHHHHHHHHHHHHHHHHHhCC-----CCCeEEEEcCcHHHHHHHHHHhccccccccce
Confidence            578888887642    223333221  2256777777777731     24457888899999999999999999999999


Q ss_pred             cCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHh-hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631          139 PKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG  215 (421)
Q Consensus       139 ~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~-~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~  215 (421)
                      ....+.+.  ...+...+.....+......  ..+.+..+. ...++++.+.+++.+|.||+..+   +++|.++|+++|
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---i~~i~~~~~~~g  173 (377)
T d1vjoa_          99 GVAGYFGNRLVDMAGRYGADVRTISKPWGE--VFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFG  173 (377)
T ss_dssp             EESSHHHHHHHHHHHHTTCEEEEEECCTTC--CCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHT
T ss_pred             eeechhhhhhhhhhhhhcccccccccCCCC--cccchhhhhhhhcCcceeeeeeeeeccceeeec---hhhhhhhhhhcc
Confidence            88777654  33344556555555543322  245555544 44567888889999999999954   888999999999


Q ss_pred             cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------
Q 014631          216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------  287 (421)
Q Consensus       216 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------  287 (421)
                      .++++|.+++.    |....++..++.+   +++.|.+|.++.|+ .+|+++.+.        ...+.....        
T Consensus       174 ~~~~vDa~~~~----g~~~~~~~~~~~d---~~~~s~~K~~~gp~-g~~~~~~~~--------~~~~~~~~~~~~~~~~~  237 (377)
T d1vjoa_         174 TLLLVDTVTSL----GGVPIFLDAWGVD---LAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWY  237 (377)
T ss_dssp             CEEEEECTTTT----TTSCCCTTTTTCS---EEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCST
T ss_pred             ceEEEecchhh----hhhhhcccccccc---eeeecccccccCCC-EEEEecchh--------hHHhhhhccCCCCccee
Confidence            99999999986    3333445555443   77888999865443 356666542        233322211        


Q ss_pred             -------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc--eeEEEE
Q 014631          288 -------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG--SMFVMV  352 (421)
Q Consensus       288 -------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~--~~~~~~  352 (421)
                                   .....+++.....++..++........+...++.+++..++.+.+... ++..+..+..  .....+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~rs~~v~~~  316 (377)
T d1vjoa_         238 LDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTV  316 (377)
T ss_dssp             TCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEE
T ss_pred             eccchhhhccCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhcc-CceeecChHhcCCeEEEE
Confidence                         111223444444444454443345667788888888899999999876 5442322221  123344


Q ss_pred             ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE-ec--CCHHHHHHHHHHHHHHHH
Q 014631          353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT-FA--IEPSALEEGLGRIKAFCQ  415 (421)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~-~~--~~~e~l~~~~~~l~~~~~  415 (421)
                      .++..     .++.+++..|++++||.+..|.....++.+||+ ++  ++.||+++++++|+++++
T Consensus       317 ~~p~~-----~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         317 CIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             ECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             ECCCC-----CCHHHHHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHHhC
Confidence            55432     257888888888899999998876667889999 45  578999999999999874

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=1.4e-20  Score=175.89  Aligned_cols=323  Identities=14%  Similarity=0.122  Sum_probs=210.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc---CCCCe
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA---RPGAN  135 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~---~~gd~  135 (421)
                      +.+++|++||.    ....+.+.+.  ....++++.+.+.++..  .+.+++.|++|+|+|++++.++..+.   ++||+
T Consensus        13 ~v~~~V~~Am~----~~~~~hr~~~f~~~~~~~~~~~r~~~~~~--~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd~   86 (382)
T d2bkwa1          13 ILSGAVQKALD----VPSLGHTSPEFVSIFQRVLKNTRAVFKSA--AASKSQPFVLAGSGTLGWDIFASNFILSKAPNKN   86 (382)
T ss_dssp             CCCHHHHHTTS----CCCCCTTSHHHHHHHHHHHHHHHHHTTCC--GGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCE
T ss_pred             CCCHHHHHHhC----cccCCCCcHHHHHHHHHHHHHHHHHHhhh--cCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCCc
Confidence            56788887763    2222223221  01223344444443211  13466789999999999999999985   68999


Q ss_pred             EEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccCceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014631          136 ILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR  212 (421)
Q Consensus       136 Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~  212 (421)
                      |++....+++.  ...++..+.....+... +.+...+.+.+++.+ .++++.+++++.+|.||+..+   +..+.+.|+
T Consensus        87 vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---~~~~~~~~~  162 (382)
T d2bkwa1          87 VLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQAIK  162 (382)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHH
T ss_pred             eEEEEechhhhhhhhhcccccccccccccc-CCCCccchhHHHHHhhhccchheeeeecccccccccc---chhhhhhcc
Confidence            99998877764  34456677776665432 233456788887765 456788899999999999977   445555555


Q ss_pred             hc--CcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhh---
Q 014631          213 KL--GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKG---  286 (421)
Q Consensus       213 ~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---  286 (421)
                      ++  ++++++|.+++.    |....++..++.+   +++.|.+|++ |.+|  +|++++++        ++.+.+..   
T Consensus       163 ~~~~~~~~~vDa~qs~----g~~pid~~~~giD---~~~~s~~K~l~gP~G--~g~l~vs~--------~~~~~~~~~~~  225 (382)
T d2bkwa1         163 QTSPETFFVVDAVCSI----GCEEFEFDEWGVD---FALTASQKAIGAPAG--LSISLCSS--------RFMDYALNDSK  225 (382)
T ss_dssp             HHCTTSEEEEECTTTT----TTSCCCTTTTTCS---EEEEESSSTTCCCSC--EEEEEECH--------HHHHHHTCHHH
T ss_pred             ccccceeeeeeccccc----ccccccccccCee---EEeecccccCcCCCc--hhhhhccH--------HHHhhhhhccc
Confidence            44  699999999987    4444455555444   7788999998 4566  79998863        23222211   


Q ss_pred             -----------------------h-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631          287 -----------------------Y-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR  342 (421)
Q Consensus       287 -----------------------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  342 (421)
                                             . ....++++.....++.++|+...+...+.+.++.+++++++++.+.+.+++....
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~  305 (382)
T d2bkwa1         226 NGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVS  305 (382)
T ss_dssp             HCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESS
T ss_pred             CCCcccchhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccc
Confidence                                   1 1223577888888888888765567778888888889999999988654433121


Q ss_pred             -CCCc--e-eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEE-ec--CCHHHHHHHHHHHHHHH
Q 014631          343 -KPEG--S-MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNWLRIT-FA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       343 -~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~-~~--~~~e~l~~~~~~l~~~~  414 (421)
                       .+..  + ....+.++        ++.++.. +|+++||.+.+|.... .++.+||+ ++  .+.|+++.+++.|..+.
T Consensus       306 ~~~~~~~s~~v~~~~~~--------~~~~~~~-~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~  376 (382)
T d2bkwa1         306 RYPSNMSAHGLTAVYVA--------DPPDVIA-FLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIK  376 (382)
T ss_dssp             CSSSTTBCSSCEEEECS--------CHHHHHH-HHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHH
T ss_pred             cCchhccCCcEEEEcCC--------CHHHHHH-HHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHH
Confidence             1211  1 12233443        3556554 5688999999886532 35789999 66  45677888888887666


Q ss_pred             HHhhh
Q 014631          415 QRHAK  419 (421)
Q Consensus       415 ~~~~~  419 (421)
                      ..+++
T Consensus       377 ~~L~~  381 (382)
T d2bkwa1         377 LALQR  381 (382)
T ss_dssp             HHTTC
T ss_pred             HHHCc
Confidence            65654

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.86  E-value=2.4e-20  Score=174.59  Aligned_cols=321  Identities=11%  Similarity=0.113  Sum_probs=209.0

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAIQVILTVLARPGANIL  137 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~~gd~Vl  137 (421)
                      ..+++|++|+.+    ...+.+...  .-+.++|+.++++++      ++ .+.|++++|+|.+++.++..+..+|++++
T Consensus        27 ~~~~~V~~Am~~----~~~~hr~~ef~~i~~~~r~~L~~ll~------~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl   96 (388)
T d2ch1a1          27 NCSKRVLTAMTN----TVLSNFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEEGDRVL   96 (388)
T ss_dssp             CCCHHHHHHTTS----CCCCTTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCHHHHHHhCc----CCCCCCCHHHHHHHHHHHHHHHHHhC------CCCCeEEEEcCcHHHHHHHHHHHhcccccccc
Confidence            457888887632    222333321  224577777777773      33 34567788899999999999999999999


Q ss_pred             EcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631          138 LPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL  214 (421)
Q Consensus       138 ~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~  214 (421)
                      +...++.+.  ...+...+.....+...+..  ..+.+.+++.. ..+++.+++++.+|.||...+   ++++.++|+++
T Consensus        97 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~---~~~i~~~~~~~  171 (388)
T d2ch1a1          97 IAVNGIWAERAVEMSERYGADVRTIEGPPDR--PFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQH  171 (388)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred             ccccccccccchhhhhhhccccccccccccc--ccchhhhhhhhccCCcceeeeeecccccccccc---hhhhcchhccc
Confidence            988777665  34456667777777654433  35666666544 457888999999999999965   67778888999


Q ss_pred             CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------
Q 014631          215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------  287 (421)
Q Consensus       215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------  287 (421)
                      |.++++|.+++.    |.....+..++.   .+++.|.+|+++.++ .+|+++.+.        ...+.+...       
T Consensus       172 ~~~~~vD~~ss~----g~~pid~~~~~~---d~~~~s~~K~~~gp~-G~g~~~~~~--------~~~~~~~~~~~~~~~~  235 (388)
T d2ch1a1         172 DCLLIVDAVASL----CGVPFYMDKWEI---DAVYTGAQKVLGAPP-GITPISISP--------KALDVIRNRRTKSKVF  235 (388)
T ss_dssp             TCEEEEECTTTB----TTBCCCTTTTTC---CEEECCCC-CCCCCS-SCEEEEECH--------HHHHHHHTCSSCCSCG
T ss_pred             cceeeeeeeecc----cccccchhccCc---eEEEEccccccCCCC-eEEEEeccH--------HHHHhhhcccCccccc
Confidence            999999999987    333444444443   377889999875432 267777642        222322110       


Q ss_pred             -----------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccc-cCCCC--ce
Q 014631          288 -----------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC-PRKPE--GS  347 (421)
Q Consensus       288 -----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-~~~~~--~~  347 (421)
                                       .....+++.....++..++............++.+.........+... ++.. +..+.  ..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~rs~  314 (388)
T d2ch1a1         236 YWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLP  314 (388)
T ss_dssp             GGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCT
T ss_pred             cccchhhhhhhcccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhc-ccccccCCHHHhCC
Confidence                             011234555556666666654333444555555555555555555543 2221 11221  11


Q ss_pred             eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE-ec--CCHHHHHHHHHHHHHHHHHhh
Q 014631          348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT-FA--IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~-~~--~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      ....+.++..     .+..++...|++++||.+.+|.....++.+||+ ++  ++.|+|++++++|+++++...
T Consensus       315 ~v~~~~~p~g-----~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~~  383 (388)
T d2ch1a1         315 TVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH  383 (388)
T ss_dssp             TEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred             eEEEEECCCC-----CCHHHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHhhC
Confidence            2344566532     256788888878889999998766567789999 66  578999999999999998754

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=8.1e-20  Score=167.36  Aligned_cols=320  Identities=16%  Similarity=0.134  Sum_probs=208.4

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE
Q 014631           61 RTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL  138 (421)
Q Consensus        61 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~  138 (421)
                      +.+++|++++.+..    .+.+.+.  .-+.+.++.+++++    +  .+.+.+++++|+|.+++.++..++.+||+|++
T Consensus        10 ~v~~~V~~am~~~~----~~hr~~~f~~i~~~~~~~l~~ll----~--~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vlv   79 (348)
T d1iuga_          10 RLHPKALEALARPQ----LHHRTEAAREVFLKARGLLREAF----R--TEGEVLILTGSGTLAMEALVKNLFAPGERVLV   79 (348)
T ss_dssp             CCCHHHHHHHHSCC----CCTTSHHHHHHHHHHHHHHHHHH----T--CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCHHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHh----C--CCCCEEEEeCchHHHHHHHHHhccccccccee
Confidence            56788988875432    2222211  11345555555555    2  45567889999999999999999999999999


Q ss_pred             cCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC-
Q 014631          139 PKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG-  215 (421)
Q Consensus       139 ~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-  215 (421)
                      ...++.+  +...++..+.++..+..+....  +++++   ...++.+.+++++..+.||+..+   +++|.++|++++ 
T Consensus        80 ~~~G~f~~~~~~~a~~~~~~~~~~~~~~g~~--~~~~~---~~~~~~~~v~~~h~eTstG~~~~---i~~i~~~~~~~~~  151 (348)
T d1iuga_          80 PVYGKFSERFYEIALEAGLVVERLDYPYGDT--PRPED---VAKEGYAGLLLVHSETSTGALAD---LPALARAFKEKNP  151 (348)
T ss_dssp             EECSHHHHHHHHHHHHTTCEEEEEECCTTCC--CCTTT---SCCSSCSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred             ecchHHHHHHHHHHHhcCcccccccccCCCc--ccccc---ccccCCCeeEEEecchhhhhhcc---HHHHHHHHHhhhc
Confidence            8888765  3566677888887777644322  34333   33567788999999999999966   677778887774 


Q ss_pred             -cEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc-CCCCceEEEEEeeCCC--------cchhHHHHHHHHh
Q 014631          216 -IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWLVTSDPS--------GILQELRIVDSIK  285 (421)
Q Consensus       216 -~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~--------~~~~~~~~~~~~~  285 (421)
                       .++++|.+++.    |....++..+..+   +++.|.+|.+ |.||  +|++++++..        ..++.....+..+
T Consensus       152 ~~l~~vDavss~----g~~~i~~d~~~iD---~~~~~sqK~l~gppG--~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~  222 (348)
T d1iuga_         152 EGLVGADMVTSL----LVGEVALEAMGVD---AAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQK  222 (348)
T ss_dssp             TCEEEEECTTTB----TTBCCCSGGGTCS---EEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHT
T ss_pred             cceeechhhhcc----cccccccccccCC---EEEeccccceecCCc--eeeeeechHHHhhhcccccccchhhhhhhhc
Confidence             78899999887    3333444444433   7788899998 5677  7999886310        0010011111111


Q ss_pred             hhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce-eEEEEecCcccccCCCC
Q 014631          286 GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS-MFVMVKLNLSLLEGISD  364 (421)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~  364 (421)
                       .....++++....+++.++|+..... ..+..++.+...+.++..++.. |+... ....+ -...+.+|..     .+
T Consensus       223 -~~~~~~Tp~v~~i~~l~~aL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-gl~~~-~~~~s~~v~~~~~P~g-----~~  293 (348)
T d1iuga_         223 -EGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPV-PKRFSPAVAAFYLPEG-----VP  293 (348)
T ss_dssp             -TTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSBCTTCEEEECCTT-----CC
T ss_pred             -cCcccccccchHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhhhhhhh-hhccC-hhhcCCeEEEEECCCC-----CC
Confidence             11234578888888888888753333 3444444444555555555554 66622 22111 1344566542     25


Q ss_pred             hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          365 DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       365 ~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ..++... ++++|+.+.+|...-.+..+||+..  .+.+|++.+++.|+++++++
T Consensus       294 ~~~~~~~-l~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l~~~  347 (348)
T d1iuga_         294 YARVKEA-FAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  347 (348)
T ss_dssp             HHHHHHH-HHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-HHHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            6666654 5788999999876555678999864  78999999999999999876

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.86  E-value=3.5e-20  Score=174.62  Aligned_cols=347  Identities=15%  Similarity=0.095  Sum_probs=211.1

Q ss_pred             cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631           41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ  120 (421)
Q Consensus        41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~  120 (421)
                      ..|.+++|+..|.-....+ ..+|.+.+++++++++...  +...   ......+++++....+   ..+.++++++|++
T Consensus        49 ~~G~~ylD~~~~~~~~~lG-h~hp~i~~ai~~~~~~~~~--~~~~---~~~~~~la~~~~~~~~---~~~~v~f~~sGse  119 (427)
T d2gsaa_          49 VDGNRYIDYVGTWGPAICG-HAHPEVIEALKVAMEKGTS--FGAP---CALENVLAEMVNDAVP---SIEMVRFVNSGTE  119 (427)
T ss_dssp             TTSCEEEESSGGGTTTTTC-BTCHHHHHHHHHHHTTCSC--CSSC---CHHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred             CCCCEEEEechhHHHHhcc-CCcHHHHHHHHHHHHhcCc--cccc---hhHHHHHHHHHHhhCC---ccccccccCCcHH
Confidence            3589999998775443333 4689999999999987432  1111   2455566666665433   3468999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCce-e--EeeeccCC-------C---CccCCHHHHHhhhcc--Cc
Q 014631          121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLE-I--RHFDLLPE-------K---GWEVDLDGLEALADE--NT  183 (421)
Q Consensus       121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~-~--~~~~~~~~-------~---~~~~d~e~l~~~~~~--~~  183 (421)
                      |+..+++...  ...++|+..+.+|++....+...... .  ..+|..+.       +   ...-|++.+++.+.+  +.
T Consensus       120 A~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~  199 (427)
T d2gsaa_         120 ACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGE  199 (427)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEECTTCHHHHHHHHTTSTTT
T ss_pred             HHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccCcchHHHHHHHHHhCCCC
Confidence            9999998653  23368999999999865443322110 0  00010000       0   001378899988864  34


Q ss_pred             eEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631          184 VAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW  261 (421)
Q Consensus       184 ~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  261 (421)
                      .+.++..| +...|.. .|++.+++|.++|++||+++|+||+++++. .|.. .....++...+++   +++|.+ ..|+
T Consensus       200 iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r-~g~~-~~~~~~gi~PDi~---~~gK~l-ggG~  273 (427)
T d2gsaa_         200 IAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFR-IAYG-GVQEKFGVTPDLT---TLGKII-GGGL  273 (427)
T ss_dssp             EEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTT-TBTT-CHHHHTTCCCSEE---EECGGG-GTTS
T ss_pred             eEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccce-eccc-chHHhcCCCHHHH---hhhhcc-CCCc
Confidence            45567777 4445654 677889999999999999999999999874 4443 3333444443444   467985 5688


Q ss_pred             eEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631          262 RLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEIP  336 (421)
Q Consensus       262 r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~  336 (421)
                      .+|.++++        +++++.+....    ..+.+.++++.+++.++|+...+ +..++..+.-...++.+.+..++.+
T Consensus       274 p~~a~~~~--------~~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~  345 (427)
T d2gsaa_         274 PVGAYGGK--------REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETG  345 (427)
T ss_dssp             CCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeeeeeh--------HHHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcC
Confidence            89998885        35666665422    23457899999999998876443 3334444334444444444444442


Q ss_pred             CccccCCCCceeEEEEecCccccc-----CCCCh---HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHH
Q 014631          337 CITCPRKPEGSMFVMVKLNLSLLE-----GISDD---MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLG  408 (421)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~  408 (421)
                      ....+ ...++++ .+.+......     ...+.   ..+...+ .++||++.|+..    ..+-+++.++++||+++++
T Consensus       346 ~~~~v-~~~ggm~-~i~~~~~~v~~~~~~~~~d~~~~~~~~~~l-l~~Gv~l~p~~~----~~~~~~l~~Te~dId~~l~  418 (427)
T d2gsaa_         346 HAACG-GQVSGMF-GFFFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAHTEEDIDATLA  418 (427)
T ss_dssp             CCCEE-EEETTEE-EEESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHHHHHHHHH
T ss_pred             CCcEE-cccCCeE-EEEEeccCCCCHHHhhcccHHHHHHHHHHH-HHCCEEECCCCC----cceeCCCCCCHHHHHHHHH
Confidence            21112 2223333 2222111000     00011   2334444 567999987542    1223455689999999999


Q ss_pred             HHHHHHHHh
Q 014631          409 RIKAFCQRH  417 (421)
Q Consensus       409 ~l~~~~~~~  417 (421)
                      +|+++++++
T Consensus       419 al~~al~~L  427 (427)
T d2gsaa_         419 AARTVMSAL  427 (427)
T ss_dssp             HHHHHHTCC
T ss_pred             HHHHHHHhC
Confidence            999998753

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.85  E-value=1e-18  Score=159.71  Aligned_cols=219  Identities=17%  Similarity=0.158  Sum_probs=164.4

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~  162 (421)
                      ....|++.++++-+        .+..+++++|+.|+..++..++++||+|++++..|.+....+    ...|.++..+..
T Consensus        64 T~~~LE~~la~LEg--------g~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~  135 (397)
T d1y4ia1          64 TTDALEKKLAVLER--------GEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA  135 (397)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHhC--------CccceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCceEeeccCC
Confidence            35688888888762        456788899999999999999999999999999998765544    467888887753


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                             -|++.+++++++++++|++..|.||+..+   .++++|+++|+++|+++++|..++.-.    .+.++ .++.
T Consensus       136 -------~d~~~~~~~i~~~Tklv~~Esp~NP~l~v---~Di~~i~~iA~~~gi~~vvDnT~atP~----~~~Pl-~~Ga  200 (397)
T d1y4ia1         136 -------GKPEEIRAAMRPETKVVYIETPANPTLSL---VDIETVAGIAHQQGALLVVDNTFMSPY----CQQPL-QLGA  200 (397)
T ss_dssp             -------TSHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTT----TCCGG-GGTC
T ss_pred             -------CCHHHHHHhcCCCCcEEEecCCcccceee---cccHHHHHHhhcCCceEEecCcccCcc----cCcch-hcCC
Confidence                   27899999999999999999999999999   569999999999999999999987522    12233 2333


Q ss_pred             CCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHH--Hhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDS--IKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      +   |++.|++|.++.-+--+ |.++++        .+.+.+  +..... .....++.....+...|+.     +.-+.
T Consensus       201 D---ivihS~TKyi~Ghsdvl~G~v~~~--------~~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~T-----L~lRm  264 (397)
T d1y4ia1         201 D---IVVHSVTKYINGHGDVIGGIIVGK--------QEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRM  264 (397)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEEC--------HHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             C---EEEEehhhhcCCCcceeeeccCCC--------HHHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCc-----HHHHH
Confidence            3   88999999987655444 555553        233333  222232 2346777777776666664     66677


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ++..++...+.+.|+++|.+..+..|
T Consensus       265 ~~~~~nA~~lA~~L~~hp~V~~V~yP  290 (397)
T d1y4ia1         265 ERHCENALKIARFLEGHPSITRVYYP  290 (397)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHHHhCCCcCeEeCC
Confidence            88889999999999998877544444

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.85  E-value=3.8e-19  Score=162.57  Aligned_cols=219  Identities=22%  Similarity=0.240  Sum_probs=166.0

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~  162 (421)
                      ....|++.++++-+        .+..+++++|+.|+..++.+++++||+|++++..|.+....+    ...|.++.+++.
T Consensus        60 T~~~LE~~la~LEg--------~~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~  131 (392)
T d1gc0a_          60 TLNLLEARMASLEG--------GEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM  131 (392)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT
T ss_pred             HHHHHHHHHHHHhC--------CcceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCc
Confidence            35788888888863        457788999999999999999999999999999999876655    445888777643


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                             -|++++++++++++++|++.+|.||+..+   .++++|+++|+++|+++++|..++.-.+    +.++ .++.
T Consensus       132 -------~d~~~~~~ai~~~t~lv~~Esp~NP~l~v---~Di~~i~~ia~~~g~~~vvDnT~atP~~----~~Pl-~~Ga  196 (392)
T d1gc0a_         132 -------ADLQALEAAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTYCTPYL----QRPL-ELGA  196 (392)
T ss_dssp             -------TCHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHGGGTCEEEEECTTTHHHH----CCGG-GGTC
T ss_pred             -------cCHHHHHHhCCCCCeEEEecccccceeee---cchHHHHHHHHhcCCEEEEecCccCccc----cChH-HhCC
Confidence                   38899999999999999999999999999   5699999999999999999999975321    1232 3344


Q ss_pred             CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHH--hhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSI--KGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      +   +++.|.+|.++.-+ .-.|.++++        .+.+.++  ..... .....++.....+...|+.     +.-+.
T Consensus       197 D---ivihS~TKyi~Ghsd~~~G~v~~~--------~~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~T-----L~lRm  260 (392)
T d1gc0a_         197 D---LVVHSATKYLSGHGDITAGIVVGS--------QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNLRM  260 (392)
T ss_dssp             S---EEEEETTTTTTCSSSCCCEEEEEC--------HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             C---EEEEecceeecCCcccccccccch--------hHHHHHHHHHHHHHccCCcCChhhHHHHHhcccc-----HHHHH
Confidence            3   88999999986544 445666664        2343333  22232 2456777777777766765     66777


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ++..++...+.+.|+++|.+.-+..|
T Consensus       261 ~~~~~nA~~lA~~L~~hp~V~~V~yP  286 (392)
T d1gc0a_         261 DRHCANAQVLAEFLARQPQVELIHYP  286 (392)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCccEEeec
Confidence            88889999999999988776533333

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.85  E-value=4.1e-19  Score=165.41  Aligned_cols=310  Identities=12%  Similarity=0.070  Sum_probs=202.5

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCC
Q 014631           63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKP  141 (421)
Q Consensus        63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p  141 (421)
                      .++-++++.+.++.+.+ ..++  ...++++.++++++        .+.++++++||.|+.+++.++ +++||+|+++..
T Consensus        11 ~~~~~~~~~~~~~~~~~-~~G~--~v~~~E~~la~~~g--------~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~   79 (376)
T d1mdoa_          11 GAEELAAVKTVLDSGWI-TTGP--KNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSM   79 (376)
T ss_dssp             CHHHHHHHHHHHHHTCC-SSSH--HHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHhcCCC-cCCH--HHHHHHHHHHHHHC--------cCeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecc
Confidence            45566888888887533 2343  36899999999984        346788889999999999998 789999999999


Q ss_pred             CCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631          142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD  221 (421)
Q Consensus       142 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  221 (421)
                      +|.+....+...|.+++.++++++ .+.+|++++++++.+++++|+++   +..|..   .++.+|.++|+++|+++|+|
T Consensus        80 ~~~~~~~ai~~~g~~pv~~d~~~~-~~~~d~~~l~~~i~~~tkaIi~~---h~~G~~---~~~~~i~~i~~~~~i~vIeD  152 (376)
T d1mdoa_          80 TWVSTLNMIVLLGANPVMVDVDRD-TLMVTPEHIEAAITPQTKAIIPV---HYAGAP---ADLDAIYALGERYGIPVIED  152 (376)
T ss_dssp             SCHHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEECCB---CGGGCC---CCHHHHHHHHHHHTCCBCEE
T ss_pred             cccccccchhccccceeeeccccc-ccCCCHHHHHHhcCCCCeEEEEe---CCCCCc---cchhHHHHHHHhcCceEEec
Confidence            999999999999999999998754 56799999999999999988765   467877   45788889999999999999


Q ss_pred             ccccccccCCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc---------
Q 014631          222 EVYDHLTFGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI---------  290 (421)
Q Consensus       222 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~---------  290 (421)
                      ++|+.+..-..  ...   +..+  +.+.||  +|.+..  ...|.+++++       +++.+.++.....         
T Consensus       153 ~a~a~g~~~~~--~~~---g~~g--~~~~Sf~~~K~l~~--g~GG~i~t~~-------~~l~~~~~~~~~~g~~~~~~~~  216 (376)
T d1mdoa_         153 AAHATGTSYKG--RHI---GARG--TAIFSFHAIKNITC--AEGGIVVTDN-------PQFADKLRSLKFHGLGVDAWDR  216 (376)
T ss_dssp             CTTCTTCEETT--EET---TSSS--EEEEECCTTSSSCS--SSCEEEEESC-------HHHHHHHHHHTBTTEECC----
T ss_pred             cchhccCeeCC--eec---cccc--CccccCCCcCCCCC--CCCCEEEEec-------hhHHHHHHhhcccCCccccccc
Confidence            99987441111  011   1122  233455  477543  3357777754       3455544333211         


Q ss_pred             ----------------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc---eeE-E
Q 014631          291 ----------------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG---SMF-V  350 (421)
Q Consensus       291 ----------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---~~~-~  350 (421)
                                      ....+....+.+..-|     ..+++..++.+++.+++.+.|++++.+........   .++ +
T Consensus       217 ~~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL-----~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  291 (376)
T d1mdoa_         217 QSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL-----QKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLF  291 (376)
T ss_dssp             -------CCEESSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCE
T ss_pred             ccccccccccchhcccccccchhhhhhhhhhh-----hhhhHHHHHHhhhhhhhhhhccccccccccccccccccccccc
Confidence                            0111222222222223     33566677778888889999988765542212211   111 2


Q ss_pred             EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-----------CC----------CCeEEEEec--CCHHHHHHHH
Q 014631          351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-----------GM----------KNWLRITFA--IEPSALEEGL  407 (421)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~----------~~~iRi~~~--~~~e~l~~~~  407 (421)
                      .+.++.... . .+-.++.. .|+++||.+++....           ..          ...+.+-+.  .+++|+++++
T Consensus       292 ~~~~~~~~~-~-~~Rd~l~~-~L~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~  368 (376)
T d1mdoa_         292 IIRVDEARC-G-ITRDALMA-SLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVI  368 (376)
T ss_dssp             EEECCHHHH-S-SCHHHHHH-HHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHH
T ss_pred             ccccccccc-h-hhHHHHHH-HHHHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHH
Confidence            222222110 0 01124554 458889988654221           00          234555444  5889999999


Q ss_pred             HHHHHHH
Q 014631          408 GRIKAFC  414 (421)
Q Consensus       408 ~~l~~~~  414 (421)
                      +.|++++
T Consensus       369 ~~i~~i~  375 (376)
T d1mdoa_         369 TALHQIA  375 (376)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999875

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.3e-18  Score=158.68  Aligned_cols=284  Identities=18%  Similarity=0.202  Sum_probs=195.3

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~  162 (421)
                      ....|++.++++-+        .+..+++++|+.|+..++.+++++||.|++.+..|.+.....    ...|.++.++..
T Consensus        51 t~~~le~~la~LEg--------g~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~  122 (384)
T d1cs1a_          51 TRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ  122 (384)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred             HHHHHHHHHHHHhC--------CCceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccccccccC
Confidence            35688888888762        457889999999999999999999999999999998764443    345666655532


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                             .|.+++++.+.+++++|++..|.||+..+   .++++|+++|+++|+++|+|..+....    ...++ .++.
T Consensus       123 -------~d~~~~~~~~~~~t~~v~~EspsNP~l~v---~Di~~i~~ia~~~g~~~vVDNT~atP~----~~~Pl-~~Ga  187 (384)
T d1cs1a_         123 -------GDEQALRAALAEKPKLVLVESPSNPLLRV---VDIAKICHLAREVGAVSVVDNTFLSPA----LQNPL-ALGA  187 (384)
T ss_dssp             -------TCHHHHHHHHHTCCSEEEEECSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTT----TCCGG-GGTC
T ss_pred             -------CCHHHHHhhccccccEEEEecccccccee---ccHHHHhhhhhhcCcEEEEeccccCcc----ccccc-ccCC
Confidence                   37889999999999999999999999999   558899999999999999999986522    12232 2333


Q ss_pred             CCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDI  320 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  320 (421)
                      +   |++.|.+|.++..|-- .|.+++++       +++.+.+..... .....++.....+...|+.     +.-+.++
T Consensus       188 D---iVvhS~TKyi~Ghsdv~~G~vv~~~-------~~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~T-----L~lRm~~  252 (384)
T d1cs1a_         188 D---LVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPRMEL  252 (384)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHHHHH
T ss_pred             C---EEEEccccccccCCCcccccccCCc-------hhhhhhhhhhhhhhhhccccccHHHHhhccch-----hHHHHHH
Confidence            3   8899999998765543 45555543       234444444332 2345677777766666654     6667778


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC
Q 014631          321 LRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM  384 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~  384 (421)
                      ..++...+.+.|+++|.+.-+..|.                .|..+.+.+..        +.+.+.++++.-.++.. +.
T Consensus       253 ~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~--------~~~~a~~f~~~L~l~~~-a~  323 (384)
T d1cs1a_         253 AQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--------DEQTLRRFLGGLSLFTL-AE  323 (384)
T ss_dssp             HHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--------CHHHHHHHHHTCSSSEE-BS
T ss_pred             HHHHHHHHHHhcccCCceeeeeeccccchhHHHHHHhhcCCCcceeEEeecc--------hHHHHHHHHHhCCccee-cc
Confidence            8899999999999988765444442                23344455542        23333444444444321 11


Q ss_pred             CCC---------------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631          385 AVG---------------------------MKNWLRITFAIEPSALEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       385 ~~~---------------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~  419 (421)
                      .++                           .++.||+|++.  |+.+.+++.|++++++..+
T Consensus       324 SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGl--Ed~eDLi~Dl~~AL~aa~~  383 (384)
T d1cs1a_         324 SLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAANK  383 (384)
T ss_dssp             CCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHTC
T ss_pred             ccCCccceeccccccccccCCHHHHHhcCCCcCeEEEEecc--CCHHHHHHHHHHHHHHhcC
Confidence            111                           13579999985  4566677777777776543

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=4.5e-20  Score=175.95  Aligned_cols=315  Identities=10%  Similarity=0.040  Sum_probs=193.7

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH-HHHHHHHHHh---cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631           89 LPARRAIADYLNSELPCKLSPDDVYLTAGCK-QAIQVILTVL---ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP  164 (421)
Q Consensus        89 ~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~-~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~  164 (421)
                      ..++..+.+++.+.+|.+... ..++++|++ .++.+++.++   ..+++.|+++...|.++..++...|.+++.+...+
T Consensus        93 ~~le~~~~~~~~~l~g~~~~~-~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~  171 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSVA-SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  171 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCC-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhCCCccc-CccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeec
Confidence            467888888888777754433 445555555 4554444443   34668999999999999999999999988886432


Q ss_pred             -CCCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-cc
Q 014631          165 -EKGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MG  238 (421)
Q Consensus       165 -~~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~  238 (421)
                       ++.+.+|+++|++++.    +++.+|+++.|+|++|.+   +++++|+++|++||+++|+|++|+.+......... ..
T Consensus       172 ~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~---~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~  248 (445)
T d3bc8a1         172 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA  248 (445)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             cCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeee---hhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhcc
Confidence             3457899999998774    357788899999999999   66999999999999999999999864311100000 01


Q ss_pred             ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccccc-CCchHHHHHHHHHhhccchhHHHHH
Q 014631          239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      ....-  .++..|.+|.++.|. ..|+++..+       ..+.+.+........ ........+....+   ....+.+.
T Consensus       249 ~~~~v--d~~~~s~hK~~~~p~-g~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~  315 (445)
T d3bc8a1         249 RVGRI--DAFVQSLDKNFMVPV-GGAIIAGFN-------EPFIQDISKMYPGRASASPSLDVLITLLSL---GCSGYRKL  315 (445)
T ss_dssp             HHSCC--CEEEEEHHHHHSCCS-SCEEEEESC-------HHHHHHHHHHSCSCBCSHHHHHHHHHHHHH---HHHHHHHH
T ss_pred             CcCCc--ceEEecCccccccCC-CCceeeeCC-------hHHHHHHHHHHhhcccCcchHHHHHHHHHH---hhhcchhh
Confidence            11111  266778999866543 356776654       345555544433221 22222222222222   23444555


Q ss_pred             HHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe----CC------
Q 014631          318 VDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP----GM------  384 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~----g~------  384 (421)
                      .+...++.+++.+.|.++.   +..+...+......++.+.........+..++.. .+.+.||....    +.      
T Consensus       316 ~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~-~L~~~gI~~~~~~~~~~~~~i~~  394 (445)
T d3bc8a1         316 LKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGS-MLFTRQVSGARAVPLGNVQTVSG  394 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHH-HHHHTTCCSCEEECSCCEEEETT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHHHHH-HHHHcCCCcceeeccccccchhh
Confidence            5555566666666655431   4332334454555555443322111112333444 44666763211    11      


Q ss_pred             ----CCCC------CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhcC
Q 014631          385 ----AVGM------KNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQQ  421 (421)
Q Consensus       385 ----~~~~------~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~~  421 (421)
                          .|+.      ...+|++++  +++|||+.++++|++++++++++|
T Consensus       395 ~~~~~~g~~~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kilk~~rk~~  443 (445)
T d3bc8a1         395 HTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQ  443 (445)
T ss_dssp             EEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhcCCCCccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence                0111      356899887  789999999999999999998753

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.7e-18  Score=156.94  Aligned_cols=339  Identities=14%  Similarity=0.061  Sum_probs=229.1

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      ..-|+|-...      -..++.+.+++...+.+....+      |+..+-+.+++....+...+.||  +...+|- ..+
T Consensus        26 ~~~i~LiaSE------N~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~--a~~anVq-p~S   96 (416)
T d1dfoa_          26 EEHIELIASE------NYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFG--ADYANVQ-PHS   96 (416)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECC-CSS
T ss_pred             HcCceEecCc------ccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhC--CCcceee-ccc
Confidence            4557775443      2456889898887776533222      33333346777777677776666  2233333 367


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-----hcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCC
Q 014631          118 CKQAIQVILTVLARPGANILLPKPGFPLYEANAR-----HTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNP  191 (421)
Q Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p  191 (421)
                      |+.|+..++.++++|||+|+..+..+.++.....     ....+.+.++++.  ...+|.|++++... .++++|++..-
T Consensus        97 Gs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~--~~~IDyd~l~~~a~~~kPklIi~G~S  174 (416)
T d1dfoa_          97 GSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDA--TGHIDYADLEKQAKEHKPKMIIGGFS  174 (416)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCS--SSSBCHHHHHHHHHHHCCSEEEEECS
T ss_pred             CccHHHHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCC--ccCccHHHHHHHHHHhccceEEeccc
Confidence            7888899999999999999999888876543322     2234566676654  33599999988664 46777765543


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      .+|  ..   -+++++.++|++.|.++++|.+|.. +..+|....|+...  +   ++.+|.+|+|  +|.|.|.++++.
T Consensus       175 ~y~--r~---~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~a--D---vvt~tThKtl--rGPrggiI~~~~  242 (416)
T d1dfoa_         175 AYS--GV---VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHA--H---VVTTTTHKTL--AGPRGGLILAKG  242 (416)
T ss_dssp             SCC--SC---CCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTS--S---EEEEESSSTT--CCCSCEEEEESS
T ss_pred             ccc--cc---cCHHHHHHHHHhcCceEEcchhhhhcceeccccCCccccc--c---eeeeehhhcc--cCCCceEEEecc
Confidence            433  33   2388889999999999999999954 44444444444332  2   7788999994  778889999864


Q ss_pred             CCcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631          271 PSGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM  348 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  348 (421)
                      ..     +++.+++......  .+++.....++.+.++.......+.+..++..++...|.+.|.+. |+.++.....+.
T Consensus       243 ~~-----~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~-G~~iv~ggTdnH  316 (416)
T d1dfoa_         243 GS-----EELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLER-GYKVVSGGTDNH  316 (416)
T ss_dssp             CC-----HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSS
T ss_pred             ch-----HhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC-CcccccCCCCCc
Confidence            32     3566777665533  234444444444555554445677888999999999999999988 988665556677


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC------CCCCeEEEEec------CCHHHHHHHHHHHHHHHHH
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV------GMKNWLRITFA------IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~------~~~~~iRi~~~------~~~e~l~~~~~~l~~~~~~  416 (421)
                      .+++.+....+     +...+..+|++.||.+.--..+      ..++.+||...      ..++|++++.+.|.++++.
T Consensus       317 lvlvdl~~~~~-----~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~  391 (416)
T d1dfoa_         317 LFLVDLVDKNL-----TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS  391 (416)
T ss_dssp             EEEEECGGGTC-----CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             eeEEEecccCC-----CHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHHc
Confidence            88888864321     3455667789999998642222      12578999975      4679999999999988864

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.85  E-value=2.2e-19  Score=170.14  Aligned_cols=340  Identities=14%  Similarity=0.100  Sum_probs=212.3

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI  122 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al  122 (421)
                      ..-+|||-....+    .+..+..    ..++..++ ..|+..+.+.+|++.++++++        .+.++++++|+.|+
T Consensus        41 ~~v~iDl~sDs~t----~am~~~~----~aa~~~GD-d~Y~~dpt~~~lE~~~a~l~G--------~e~al~~~SGt~An  103 (456)
T d1c7ga_          41 KDIYIDLLTDSGT----NAMSDKQ----WAGMMIGD-EAYAGSENFYHLEKTVKELFG--------FKHIVPTHQGRGAE  103 (456)
T ss_dssp             GGCSEECSCSSSC----CCEEHHH----HHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHH
T ss_pred             cceeeEcccCCCc----ccchHHH----HHHHhccc-hhccCCchHHHHHHHHHHHhC--------CCeEEECCCHHHHH
Confidence            4456788665543    1222333    23333332 368877778999999999984        46789999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC--------CCCccCCHHHHHhhhcc----CceEEEEeC
Q 014631          123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP--------EKGWEVDLDGLEALADE----NTVAMVIVN  190 (421)
Q Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~--------~~~~~~d~e~l~~~~~~----~~~~i~~~~  190 (421)
                      .+++++++++||.|+.... +..+.......|+.++.+..+.        ...+.+|++++++.+++    .+..+++.+
T Consensus       104 ~~a~~~l~~~Gd~Vi~~~~-f~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~  182 (456)
T d1c7ga_         104 NLLSQLAIKPGQYVAGNMY-FTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAV  182 (456)
T ss_dssp             HHHHHHHCCTTEEEEESSC-CHHHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEES
T ss_pred             HHHHHHhcCCCCeEecCcc-hHHHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeee
Confidence            9999999999999887654 4445555667787776554321        12356899999998864    335678889


Q ss_pred             CCCCc-ccccCHHHHHHHHHHHHhcCcEEEEcccccccc----------cCCCCccccc-ccCCCCCEEEEcccccccCC
Q 014631          191 PGNPC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT----------FGSTPYVRMG-VFGSTVPVITLGSMSKRWIV  258 (421)
Q Consensus       191 p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~----------~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~  258 (421)
                      ++|+. |..++.+++++|.++|++||+.++.|+++....          +.+.....+. ......+ ++..|++|.++.
T Consensus       183 ~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad-~~s~s~~K~~~~  261 (456)
T d1c7ga_         183 TVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYAD-GCTMSGKKDCLV  261 (456)
T ss_dssp             SBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTCC
T ss_pred             cccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccc-cEEEeccccccc
Confidence            98875 688999999999999999999999999975421          1111111100 0011111 455689999765


Q ss_pred             CCceEEEEEeeCCCcchhHHHHHHHHhhhcc------cccCCchHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHH
Q 014631          259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN------ISSGPATFVQGAVPQIFKNT-KEDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      ++  .|++++++       +++.++++....      ..+..+.....++...+... ..++    .++..++.+++.+.
T Consensus       262 ~~--GG~i~~~~-------~~l~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~~~~----l~~r~~~~~~L~e~  328 (456)
T d1c7ga_         262 NI--GGFLCMND-------EEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEY----IEHRVKQVRYLGDK  328 (456)
T ss_dssp             SS--CEEEEESC-------HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHH
T ss_pred             cc--eeEEEcCC-------HHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHH
Confidence            53  37777654       345555543321      11223333333333333321 1222    33334555777888


Q ss_pred             hhcCCCccccCCCCceeEEEEecCccc--cc-CCCChHHHHHHHHhhcCeeEEeCCCC-------------CCCCeEEEE
Q 014631          332 IKEIPCITCPRKPEGSMFVMVKLNLSL--LE-GISDDMEFALQLAKEESVIVLPGMAV-------------GMKNWLRIT  395 (421)
Q Consensus       332 l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~v~~g~~~-------------~~~~~iRi~  395 (421)
                      |.+. |+. +..|.++...++......  .+ ......+++..++.+.||...+...+             .....+|++
T Consensus       329 L~~~-g~~-vv~p~g~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLa  406 (456)
T d1c7ga_         329 LREA-GVP-IVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLT  406 (456)
T ss_dssp             HHHT-TCC-BCSSCCSSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEE
T ss_pred             HHhc-cCC-cccCCCCcceeEechhhccCCCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEe
Confidence            8877 766 336777776666432110  00 00124567777778889965442211             113469999


Q ss_pred             ec---CCHHHHHHHHHHHHHHHHH
Q 014631          396 FA---IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       396 ~~---~~~e~l~~~~~~l~~~~~~  416 (421)
                      ++   .|+++++.+++.|.++.++
T Consensus       407 ip~~~~T~e~iD~Vae~i~~v~~~  430 (456)
T d1c7ga_         407 IPRRVYTYAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHHHTT
T ss_pred             cCcccCCHHHHHHHHHHHHHHHhh
Confidence            87   4899999999999998754

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=1.6e-18  Score=158.21  Aligned_cols=218  Identities=16%  Similarity=0.138  Sum_probs=161.3

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~  163 (421)
                      ...|++.++++-+        .+..+++++|+.|+..+ ..++++||+|++..+.|.+....++    ..|.++.++.. 
T Consensus        51 ~~~le~~la~LE~--------~~~a~~fsSGMaAisal-l~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~-  120 (380)
T d1ibja_          51 RDALESLLAKLDK--------ADRAFCFTSGMAALSAV-THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT-  120 (380)
T ss_dssp             HHHHHHHHHHHHT--------CSEEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT-
T ss_pred             HHHHHHHHHHHcC--------CceEEehhhHHHHHHHH-HHhhCCCCEEEEEecccccccchhhhhhccccccccccCc-
Confidence            4688888888762        45678888889999854 4678999999999999988766654    45777666542 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST  243 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  243 (421)
                            .+.+++++++++++++|++..|.||+..+   .++++|+++|+++|+++|+|..++...    ...++ .++.+
T Consensus       121 ------~~~~~~~~ai~~~t~li~~EtpsNP~l~v---~Di~~i~~iA~~~g~~~vVDnT~atP~----~~~Pl-~~GaD  186 (380)
T d1ibja_         121 ------TKLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKISEMAHAQGALVLVDNSIMSPV----LSRPL-ELGAD  186 (380)
T ss_dssp             ------TSHHHHHHHCCSSEEEEEECSSCTTTCCC---CCHHHHHHHHHTTTCEEEEECTTTCTT----TCCGG-GTTCS
T ss_pred             ------chHHHHHHHhccCccEEEecccccccccc---ccHHHHHHHHHHcCCeEEeeccccccc----ccccc-ccCCC
Confidence                  37889999999999999999999999999   558999999999999999999987522    12233 23333


Q ss_pred             CCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631          244 VPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL  321 (421)
Q Consensus       244 ~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  321 (421)
                         +++.|++|.++..+-- .|.+++++       ..+.+.+..... .....++.....+...|+.     +..+.++.
T Consensus       187 ---iVvhS~TKyi~GhsDv~~G~v~~~~-------~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----l~lRm~~~  251 (380)
T d1ibja_         187 ---IVMHSATKFIAGHSDVMAGVLAVKG-------EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT-----MALRIEKQ  251 (380)
T ss_dssp             ---EEEEETTTTTTCSSCCCCEEEEECS-------HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT-----HHHHHHHH
T ss_pred             ---EEEecccceeccccCccccccccch-------hhHHHHHHhhccccCCcCCHHHHHHHHhcchh-----hhhhHHHH
Confidence               8899999998765543 45555542       234454444433 2346777777777766765     67778888


Q ss_pred             HHHHHHHHHHhhcCCCccccCCC
Q 014631          322 RDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       322 ~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .++...+.+.|+++|.+..+..|
T Consensus       252 ~~nA~~lA~~L~~hp~V~~V~yP  274 (380)
T d1ibja_         252 QENARKIAMYLSSHPRVKKVYYA  274 (380)
T ss_dssp             HHHHHHHHHHHHTCTTCCEEECT
T ss_pred             HHHHHHHHHHHHhCCCeeEEecc
Confidence            89999999999998776644343

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.84  E-value=8.3e-19  Score=165.62  Aligned_cols=354  Identities=14%  Similarity=0.097  Sum_probs=213.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA  121 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a  121 (421)
                      .|.+++|+..|.-.... ...+|.+.+++.+++++...   .......+....+++.+.+..+  ...+.++++++|++|
T Consensus        39 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~~~la~~L~~~~~--~~~~~v~f~~sGseA  112 (431)
T d1zoda1          39 DGRAILDFTSGQMSAVL-GHCHPEIVSVIGEYAGKLDH---LFSEMLSRPVVDLATRLANITP--PGLDRALLLSTGAES  112 (431)
T ss_dssp             TCCEEEETTHHHHTCTT-CBTCHHHHHHHHHHHHHCCC---CCTTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHH
T ss_pred             CCCEEEEcccCHHhhhh-cCCCHHHHHHHHHHHhhccc---cccccccHHHHHHHHHHHHhCC--cccceeeecccccch
Confidence            48899999777433222 24789999999999987432   1111112333445555544332  235789999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCce------------eEeeeccCCC-------CccC---CHHHHHh
Q 014631          122 IQVILTVLA--RPGANILLPKPGFPLYEANARHTRLE------------IRHFDLLPEK-------GWEV---DLDGLEA  177 (421)
Q Consensus       122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~------------~~~~~~~~~~-------~~~~---d~e~l~~  177 (421)
                      +..+++...  ...++|+....+|++....+...+..            ...++.....       ....   +.+.++.
T Consensus       113 ~e~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (431)
T d1zoda1         113 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD  192 (431)
T ss_dssp             HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHHHH
Confidence            999998752  23378889999999876555433211            1111111000       0001   1223322


Q ss_pred             hh---ccCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccc
Q 014631          178 LA---DENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM  252 (421)
Q Consensus       178 ~~---~~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  252 (421)
                      .+   .++..+.++..| +...|. ..|++.+++|.++|++||+++|.||+++++.+.|..+ ....++....++   ++
T Consensus       193 ~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~-~~~~~gv~PDi~---~~  268 (431)
T d1zoda1         193 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPDIL---TL  268 (431)
T ss_dssp             HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EE
T ss_pred             HHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEecccccccccccccc-ccccCCCCcchh---cc
Confidence            22   234456677788 434555 4688899999999999999999999999987777644 223333333344   56


Q ss_pred             ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh---cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHH
Q 014631          253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY---LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADIC  328 (421)
Q Consensus       253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~  328 (421)
                      +|.+ ..|+.++.+++.        +++.+.....   ...+.+.++++.+++.+.++... +..+++..+.-+...+.+
T Consensus       269 gK~l-~gG~p~~av~~~--------~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l  339 (431)
T d1zoda1         269 SKTL-GAGLPLAAIVTS--------AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGL  339 (431)
T ss_dssp             CHHH-HTTSSCEEEEEC--------HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             cccc-ccccccceeeee--------ecchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh
Confidence            7995 567888888875        2344444332   12356788899998888887533 344445444455555666


Q ss_pred             HHHhhcCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHH
Q 014631          329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSAL  403 (421)
Q Consensus       329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l  403 (421)
                      .+.+.+.|-+..+ ... |.+..+++.....   +.......+... +.++|+.+..-.....++.+|++++  .++++|
T Consensus       340 ~~~~~~~~~i~~v-rG~-Glm~~ie~~~~~~~~~~~~~~~~~i~~~-~~~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~ei  416 (431)
T d1zoda1         340 LDLMERFDCIGDV-RGR-GLLLGVEIVKDRRTKEPADGLGAKITRE-CMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEI  416 (431)
T ss_dssp             HHHHHHCTTEEEE-EEE-TTEEEEEEEEETTTTEECTTHHHHHHHH-HHHTTEECCEECCTTSCCEEEECCCTTCCHHHH
T ss_pred             hhhhhcCCCeEEE-eec-ceEEEEEEecCCcccCccHHHHHHHHHH-HHHhCcccCeeeecCCCCEEEEECCCCCCHHHH
Confidence            6666666544322 222 4454455532110   000012344444 4667986432222223578999987  799999


Q ss_pred             HHHHHHHHHHHHHh
Q 014631          404 EEGLGRIKAFCQRH  417 (421)
Q Consensus       404 ~~~~~~l~~~~~~~  417 (421)
                      ++++++|.+++++.
T Consensus       417 d~~~~~l~~al~~v  430 (431)
T d1zoda1         417 DLGLSLLGQAIERA  430 (431)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999874

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.84  E-value=3e-18  Score=154.49  Aligned_cols=337  Identities=14%  Similarity=0.072  Sum_probs=226.8

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCY------SPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG  117 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g  117 (421)
                      .+.|+|-...      -..++.+.+++...+.+....+|      +-.+-+.+++....+...+.|+  +...+|- ..+
T Consensus        23 ~~~l~LiaSE------N~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~--a~~anVq-p~S   93 (405)
T d1kl1a_          23 HAKIELIASE------NFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFG--AEHANVQ-PHS   93 (405)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHC--CSEEECC-CSS
T ss_pred             HcCceEeccC------CcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhC--CCcceee-ccC
Confidence            4567775443      24568899988887765333233      3333356777767677776666  2233333 356


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-----HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCC
Q 014631          118 CKQAIQVILTVLARPGANILLPKPGFPLYEAN-----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNP  191 (421)
Q Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p  191 (421)
                      |+.|+..++.+|++|||+|+..++.+.++...     ......+.+.++++++ .+.+|.|++++.++. ++++|++..-
T Consensus        94 Gs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G~S  172 (405)
T d1kl1a_          94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPE-THVIDYDDVREKARLHRPKLIVAAAS  172 (405)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred             chHHHHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccchh-cccccHHHHHHHHHhhCcceEEeccc
Confidence            67788889999999999999998666554322     1223456777787654 457999999997754 6676655444


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      .+|-=.     +++++.++|++.|.+++.|.+|.. +..+|..+.|+...  +   ++.+|.+|+|  +|.|.|.+++. 
T Consensus       173 ~y~r~~-----d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~a--D---vvt~tThKtl--rGPrgg~I~~~-  239 (405)
T d1kl1a_         173 AYPRII-----DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYA--H---FVTTTTHKTL--RGPRGGMILCQ-  239 (405)
T ss_dssp             SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTC--S---EEEEESSSTT--CCCSCEEEEEC-
T ss_pred             cccccc-----ChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChhhhh--h---heeccccccc--cCCCCceEEec-
Confidence            444322     388889999999999999999944 44555544455322  2   6788999994  78889999885 


Q ss_pred             CCcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631          271 PSGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM  348 (421)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  348 (421)
                             .++.+++......  .+++.....++.+.++.......+++..++..++++.|.+.|.+. |+.++.....+.
T Consensus       240 -------~~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~-G~~vv~ggTd~H  311 (405)
T d1kl1a_         240 -------EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNH  311 (405)
T ss_dssp             -------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSS
T ss_pred             -------chhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcC-CceeecCCCccc
Confidence                   3566777666543  234444444444444543334567888899999999999999987 888664555677


Q ss_pred             EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC------CCCCeEEEEec------CCHHHHHHHHHHHHHHHHH
Q 014631          349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV------GMKNWLRITFA------IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~------~~~~~iRi~~~------~~~e~l~~~~~~l~~~~~~  416 (421)
                      .+++++.....     ....+..+|++.||.+.--..+      ..++.+||...      ..++++.++.+.|.++++.
T Consensus       312 ~vlvdl~~~~~-----~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~  386 (405)
T d1kl1a_         312 LLLVDLRPQQL-----TGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN  386 (405)
T ss_dssp             EEEEECGGGTC-----CHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred             eeeccccccCC-----cHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence            88888865422     3445667789999998732221      12478999975      4679999999999988853

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.83  E-value=4.5e-18  Score=158.23  Aligned_cols=316  Identities=13%  Similarity=0.140  Sum_probs=206.1

Q ss_pred             CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEc
Q 014631           62 TTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLP  139 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~  139 (421)
                      ...+-.+++.+.++.+.+ ...++.  ..++++.+|+|++        ...++.+++||.|+.+++.++ .++||+|+++
T Consensus        11 ~~~~~~~~~~~~l~~g~~~~~~g~~--v~~fE~~~a~~~g--------~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p   80 (384)
T d1b9ha_          11 YDDAERNGLVRALEQGQWWRMGGDE--VNSFEREFAAHHG--------AAHALAVTNGTHALELALQVMGVGPGTEVIVP   80 (384)
T ss_dssp             CCHHHHHHHHHHHHTSCCBTTTCSH--HHHHHHHHHHHTT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             CCHHHHHHHHHHHHcCCeeecCCHH--HHHHHHHHHHHHC--------cCeEEEeCCHHHHHHHHHHHcCCCCCCEEEEe
Confidence            355667888888887643 233333  6899999999974        447889999999999999988 6899999999


Q ss_pred             CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631          140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI  219 (421)
Q Consensus       140 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  219 (421)
                      ..+|.+....+...|++++.+++++ ..+.+|++.+++.+.+++++|+   +.+..|..   .++.+|.++|+++|+++|
T Consensus        81 ~~t~~a~~~ai~~~g~~p~~~d~~~-~~~~~d~~~~~~~i~~~tk~i~---~~~~~g~~---~d~~~i~~~~~~~~i~li  153 (384)
T d1b9ha_          81 AFTFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIM---PVHMAGLM---ADMDALAKISADTGVPLL  153 (384)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHHTCCBC
T ss_pred             ccccccccccccccccccccccccc-cccccchhhhcccccccccccc---cccccccc---cccccchhhhhhhhhhhh
Confidence            9999999999999999999998764 4567899999999999999876   34556665   568899999999999999


Q ss_pred             Eccccccccc-CCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-------
Q 014631          220 SDEVYDHLTF-GSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-------  289 (421)
Q Consensus       220 ~De~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-------  289 (421)
                      +|.+++.+.. .|.   .+..++.    +.+.||  +|.++.  ...|++++++++..    +.+..+.....       
T Consensus       154 eD~a~a~ga~~~g~---~~g~~g~----~~~~Sf~~~K~i~~--g~GG~i~t~~~~~~----~~~~~~~~~g~~~~~~~~  220 (384)
T d1b9ha_         154 QDAAHAHGARWQGK---RVGELDS----IATFSFQNGKLMTA--GEGGAVVFPDGETE----KYETAFLRHSCGRPRDDR  220 (384)
T ss_dssp             EECTTCTTCEETTE---EGGGSSS----CEEEECCTTSSSCS--SSCEEEEECTTCHH----HHHHHHHHTBTTCCTTCS
T ss_pred             hhhceecccccCCE---ecCcccc----cceecccccccccc--cccchhhhhhHHHH----HHHHHHHhcCCCCccccc
Confidence            9999987552 222   1222222    334444  677533  33688888654411    11222221110       


Q ss_pred             --------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----ce-eEEEEecCc
Q 014631          290 --------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----GS-MFVMVKLNL  356 (421)
Q Consensus       290 --------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----~~-~~~~~~~~~  356 (421)
                              ...-++.+..+.+..-|+     .+++..++-+++.+++.+.|++++++.....+.    .. .+..+.++.
T Consensus       221 ~~~~~~~G~n~rms~l~Aaig~~qL~-----~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  295 (384)
T d1b9ha_         221 RYFHKIAGSNMRLNEFSASVLRAQLA-----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPG  295 (384)
T ss_dssp             SCCCCSCCCBCBCBHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTT
T ss_pred             cccccccccccccccchhhhhhhhhh-----hcccchhhhhhhhhhhhhhhhcccccccccccccccccccccccceecc
Confidence                    011233343333333343     356666666788888889998887764221111    11 223333432


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCCC----------CC-------------------CCeEEEEec--CC-HHHHH
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMAV----------GM-------------------KNWLRITFA--IE-PSALE  404 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------~~-------------------~~~iRi~~~--~~-~e~l~  404 (421)
                      ..    ....+.+...|+++||.+.+....          +.                   ...+.+-+.  .+ ++|++
T Consensus       296 ~~----~~~Rd~l~~~L~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~  371 (384)
T d1b9ha_         296 LT----EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELH  371 (384)
T ss_dssp             CC----HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHH
T ss_pred             cc----cccHHHHHHHHHHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEEEccCCCCCCCHHHHH
Confidence            11    012333444457889988765321          00                   134555554  34 57999


Q ss_pred             HHHHHHHHHHHH
Q 014631          405 EGLGRIKAFCQR  416 (421)
Q Consensus       405 ~~~~~l~~~~~~  416 (421)
                      ..++.|++++.+
T Consensus       372 ~I~~~i~~~l~~  383 (384)
T d1b9ha_         372 ATAEIIADAVAR  383 (384)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh
Confidence            999999999865

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.83  E-value=1.2e-18  Score=165.60  Aligned_cols=336  Identities=10%  Similarity=0.042  Sum_probs=218.4

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-------CCCcEEEcCCHHHHHHHHHHHhcC----
Q 014631           63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKL-------SPDDVYLTAGCKQAIQVILTVLAR----  131 (421)
Q Consensus        63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~-------~~~~i~~~~g~~~al~~~~~~l~~----  131 (421)
                      ++.+...+...+-+.+...|...+...+++..+.+|+.+.+|.+-       ....-++|+||++++...+.+..+    
T Consensus        86 ~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~  165 (476)
T d1js3a_          86 YPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR  165 (476)
T ss_dssp             HHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHH
Confidence            344444333333333444555555567999999999999888752       223568899999888887754321    


Q ss_pred             ------CC---------CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeC
Q 014631          132 ------PG---------ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVN  190 (421)
Q Consensus       132 ------~g---------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~  190 (421)
                            +|         -.|++++-+|+++..++...|.+++.++.+  +++.+|+++|++.+++.      +.+|+.+.
T Consensus       166 ~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lGl~~~~v~~d--~~~~md~~~L~~~i~~~~~~g~~p~~Vvata  243 (476)
T d1js3a_         166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATL  243 (476)
T ss_dssp             HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred             hhcccccCcccccccCceEEEecccccHHHHHHHHhcCceEEEeccC--CCCCcCHHHHHHHHHHHHhcCCCcEEEeecC
Confidence                  11         147888999999999999999999888864  45679999999988642      24566777


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC-cccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP-YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS  269 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  269 (421)
                      +++.||.+   +++++|+++|++||+++++|.+|+++...... ...+..+..-+  -+..++||+++. ...+|+++++
T Consensus       244 Gtt~~G~i---Dpl~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aD--Sit~d~HK~l~~-P~~~g~~l~r  317 (476)
T d1js3a_         244 GTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD--SFNFNPHKWLLV-NFDCSAMWVK  317 (476)
T ss_dssp             SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCS--EEEECHHHHSSC-CSSCEEEEES
T ss_pred             CCccceee---ccHHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcccc--eeeecCcccccc-CCcceeeccc
Confidence            89999999   88999999999999999999999886533222 21222222111  334489999554 4568888886


Q ss_pred             CCCcchhHHHHHHHHhh-------h----------cccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631          270 DPSGILQELRIVDSIKG-------Y----------LNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR  331 (421)
Q Consensus       270 ~~~~~~~~~~~~~~~~~-------~----------~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  331 (421)
                      ++.      .+...+..       .          ...+ .+.-......+...+......++.++.++..++.+++.+.
T Consensus       318 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~  391 (476)
T d1js3a_         318 RRT------DLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAF  391 (476)
T ss_dssp             CHH------HHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chH------HHHHHHhcChhhhccccccccccccccccccccchhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH
Confidence            532      11111100       0          0000 0111111222333444444678899999999999999999


Q ss_pred             hhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHH
Q 014631          332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLG  408 (421)
Q Consensus       332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~  408 (421)
                      +++.|+++++..|.-+ .+.+++....    .-...+.+++.++-.+.+.+.. .....++|++++   +++++++.+++
T Consensus       392 l~~~~~fel~~~p~l~-iV~Fr~~~~d----~~n~~l~~~l~~~G~~~~s~t~-~~g~~~lR~~i~n~~Tt~~did~~~~  465 (476)
T d1js3a_         392 VLQDPRFEVCAEVTLG-LVCFRLKGSD----GLNEALLERINSARKIHLVPCR-LRGQFVLRFAICSRKVESGHVRLAWE  465 (476)
T ss_dssp             HHHCTTEEECSCCCSS-EEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHH
T ss_pred             HhcCCCeEEECCCceE-EEEEEccCCh----HHHHHHHHHHHhcCCEEEeeee-ECCEEEEEEEeCCCCCCHHHHHHHHH
Confidence            9999999866455544 4445553210    0134566666444335555432 222347999986   57889999999


Q ss_pred             HHHHHHHHhh
Q 014631          409 RIKAFCQRHA  418 (421)
Q Consensus       409 ~l~~~~~~~~  418 (421)
                      .|++..+++.
T Consensus       466 ~i~~~a~~ll  475 (476)
T d1js3a_         466 HIRGLAAELL  475 (476)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999988765

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.82  E-value=7.2e-19  Score=168.36  Aligned_cols=317  Identities=15%  Similarity=0.082  Sum_probs=191.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC-------eEEEcCCCCcchHHHHhh
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA-------NILLPKPGFPLYEANARH  152 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd-------~Vl~~~p~y~~~~~~~~~  152 (421)
                      ..|+...++.+|++.++++++        .+.++++++|++|+..+++.++++|+       .++...+.+..+......
T Consensus        69 ~~y~~~~~~~~le~~~a~l~g--------~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~  140 (465)
T d1ax4a_          69 EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVEL  140 (465)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHH
T ss_pred             hhhccChHHHHHHHHHHHHHC--------CCEEEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHHHH
Confidence            368888888899999999983        46899999999999999999875443       344555444455556677


Q ss_pred             cCceeEeeecc--------CCCCccCCHHHHHhhhcc---C-ceEEEEeCCCCCc-ccccCHHHHHHHHHHHHhcCcEEE
Q 014631          153 TRLEIRHFDLL--------PEKGWEVDLDGLEALADE---N-TVAMVIVNPGNPC-GNVFTYQQLQKIAEKARKLGIMVI  219 (421)
Q Consensus       153 ~g~~~~~~~~~--------~~~~~~~d~e~l~~~~~~---~-~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li  219 (421)
                      .|..++.+...        ....+.+|++++++++++   . +..+++..++|.. |..+|.+++++|.++|++||+++|
T Consensus       141 ~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~  220 (465)
T d1ax4a_         141 NGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVV  220 (465)
T ss_dssp             TTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEE
T ss_pred             cCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEE
Confidence            78776654321        123456899999998753   2 3344455556554 466899999999999999999999


Q ss_pred             EcccccccccC----------CCCccccc-ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-
Q 014631          220 SDEVYDHLTFG----------STPYVRMG-VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-  287 (421)
Q Consensus       220 ~De~~~~~~~~----------~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-  287 (421)
                      +|+++......          +.....+. ..... ..+...|.+|.  +.+.+.|++++++..      .+....... 
T Consensus       221 ~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~k~--~~~~~~g~l~~~~~~------~~~~~~~~~~  291 (465)
T d1ax4a_         221 MDSARFCENAYFIKARDPKYKNATIKEVIFDMYKY-ADALTMSAKKD--PLLNIGGLVAIRDNE------EIFTLARQRC  291 (465)
T ss_dssp             EECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGG-CSEEEEETTST--TCCSSCEEEEESSCH------HHHHHHHHHH
T ss_pred             EECcchhhhhcccccccccccccchhhhccccccc-cceeEeecccC--cccccceeEeecchH------HHHHhhhccc
Confidence            99998642110          11000000 00000 01334455555  556667888886532      122222111 


Q ss_pred             ---cc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc--cc
Q 014631          288 ---LN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LE  360 (421)
Q Consensus       288 ---~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~  360 (421)
                         ..  ...........++...+...   ..++..++..++.+++.+.|++. ++.++ .+.+++++........  ..
T Consensus       292 ~~~~~~~~~~~~~~~~~~a~~~~~~e~---~~~~~~~~~~~~~~~l~~~L~~~-g~~~v-~~~~~~~~~~~~~~~~~~~~  366 (465)
T d1ax4a_         292 VPMEGFVTYGGLAGRDMAAMVQGLEEG---TEEEYLHYRIGQVKYLGDRLREA-GIPIQ-YPTGGHAVFVDCKKLVPQIP  366 (465)
T ss_dssp             HHHTCSTTTTTCCHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHHT-TCCBC-SSCCSSEEEEESTTTCTTSC
T ss_pred             cccccCCCcchhhHHHHHHHhhhhHHh---hhHHHHHHHHHHHHHHHHHHHhh-cCccc-cCCCcceeeeehhhhcCCCc
Confidence               11  11222333333333333221   11333444556677888888876 66634 6666666655433211  00


Q ss_pred             -CCCChHHHHHHHHhhcCeeEEeCCC-------------CCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHhh
Q 014631          361 -GISDDMEFALQLAKEESVIVLPGMA-------------VGMKNWLRITFA---IEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       361 -~~~~~~~~~~~ll~~~gv~v~~g~~-------------~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~  418 (421)
                       .......+...++.+.||.......             +...+.+|++++   .|+|+++.+++.|.+++++..
T Consensus       367 ~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~~~~  441 (465)
T d1ax4a_         367 GDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA  441 (465)
T ss_dssp             GGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred             cccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence             0012345667777888987653221             112467999975   589999999999999887653

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.82  E-value=8.2e-18  Score=153.97  Aligned_cols=220  Identities=15%  Similarity=0.145  Sum_probs=160.4

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~  162 (421)
                      ....|++.++++-+        .+..+++++|+.|+..++.+++++||+|++.+..|.+....+    ...|.++..+..
T Consensus        68 t~~~LE~~la~LEg--------g~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~  139 (398)
T d1qgna_          68 TTVVLEEKISALEG--------AESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP  139 (398)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred             HHHHHHHHHHHHhC--------CceEEEecCcchHHHHHHhhcccccccccccccccchhhhhhcccccccccccccccc
Confidence            35688888888762        467889999999999999999999999999999998875554    456777666642


Q ss_pred             cCCCCccCCHHHH-HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631          163 LPEKGWEVDLDGL-EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       163 ~~~~~~~~d~e~l-~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                             .+.++. ++...+++++|++..|.||+..+   .++++|+++|+++|+++|+|..++...    .+.++ .++
T Consensus       140 -------~~~~~~~~~~~~~~t~~v~~EspsNP~l~v---~Di~~ia~ia~~~g~~~vVDnT~atP~----~~~Pl-~~G  204 (398)
T d1qgna_         140 -------ADVGALELALNQKKVNLFFTESPTNPFLRC---VDIELVSKLCHEKGALVCIDGTFATPL----NQKAL-ALG  204 (398)
T ss_dssp             -------SCHHHHHHHHHHSCEEEEEEESSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTT----TCCTT-TTT
T ss_pred             -------cchhhhhhhhccccceEEEccCcccccccc---chHHHHHHHHhhcCCEEEecceeeccc----cCCch-hhC
Confidence                   244444 44567889999999999999999   559999999999999999999986522    12222 233


Q ss_pred             CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDI  320 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  320 (421)
                      .+   |++.|.+|.++..+--+|.+++.+       +++...+..... .....++.....+...|+.     +.-+.++
T Consensus       205 aD---iVihS~TKy~~Ghsdv~~G~v~~~-------~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----L~lRm~~  269 (398)
T d1qgna_         205 AD---LVLHSATKFLGGHNDVLAGCISGP-------LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQQ  269 (398)
T ss_dssp             CS---EEEECTTTTTTCSSSCCCEEEEEC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHHH
T ss_pred             CC---EEEEechhhcCcccceeehhhcch-------hhhhhhhhhhcccCCCcCCHHHHHHHHhcchH-----HHHHHHH
Confidence            33   889999999876654444444432       345555554443 2346677777776666654     6677788


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCC
Q 014631          321 LRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ..++...+.+.|+++|.+.-+..|
T Consensus       270 ~~~nA~~lA~~L~~hp~V~~V~yP  293 (398)
T d1qgna_         270 QNSTALRMAEILEAHPKVRHVYYP  293 (398)
T ss_dssp             HHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHhCCCeeecCCC
Confidence            889999999999998876534344

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=1.4e-17  Score=152.66  Aligned_cols=218  Identities=11%  Similarity=0.133  Sum_probs=158.1

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~  163 (421)
                      ...|++.++++-+        .+..+++++|+.|+..++..++++||+|++....|.+....+.    ..|.++..+.. 
T Consensus        60 ~~~le~~la~LEg--------~~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~-  130 (391)
T d1cl1a_          60 HFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP-  130 (391)
T ss_dssp             HHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT-
T ss_pred             HHHHHHHHHHHhC--------CccEEEeccccceeeehhhcccCCCCeEEEecccccchhhhhhhcccccccccccccC-
Confidence            4688888888752        4678999999999999999999999999999999988765543    45777666542 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFG  241 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~  241 (421)
                            .|.+++++.+++++++|++..|.||+..+.+   +++++++|++  +|+++++|..++...    ...++ .++
T Consensus       131 ------~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~----~~~Pl-~~G  196 (391)
T d1cl1a_         131 ------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGV----LFKAL-DFG  196 (391)
T ss_dssp             ------TCGGGGGGTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTT----SSCGG-GGT
T ss_pred             ------ccccccccccccccceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchh----hhccc-ccc
Confidence                  2678899999999999999999999999954   7777888865  599999999997632    12233 233


Q ss_pred             CCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          242 STVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       242 ~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      .+   +++.|.+|.++..+-- .|.++.+ +.       +.+.+.... ......++.....+...|+.     +.-+.+
T Consensus       197 aD---ivvhS~TKy~~GhsdvlgG~vv~~-~~-------~~~~~~~~~~~~G~~~~p~~a~ll~rgl~T-----L~lR~~  260 (391)
T d1cl1a_         197 ID---VSIQAATKYLVGHSDAMIGTAVCN-AR-------CWEQLRENAYLMGQMVDADTAYITSRGLRT-----LGVRLR  260 (391)
T ss_dssp             CS---EEEEETTTTTTCSSSCCCEEEEEC-TT-------THHHHHHHHHHTTCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred             cc---eEEeecchhccccccccccceecc-cc-------ccccchhhhhcccccCCchhhhhhhccchh-----HHHHHH
Confidence            33   8899999998765543 4555543 32       223332222 22345666766666555554     666777


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCC
Q 014631          320 ILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      +..++...+.+.|+++|.+..+..|
T Consensus       261 ~~~~nA~~vA~~L~~hp~V~~V~yP  285 (391)
T d1cl1a_         261 QHHESSLKVAEWLAEHPQVARVNHP  285 (391)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHHhcccccccccc
Confidence            8889999999999998876644444

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.81  E-value=9.4e-18  Score=150.81  Aligned_cols=216  Identities=16%  Similarity=0.148  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeeccCC
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLLPE  165 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~  165 (421)
                      .|++.+|++-+        .+..+++++|+.|+..++..++++||+|+++++.|.+....    .+..|.++.+++.   
T Consensus         2 aLE~~la~Leg--------~~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~---   70 (331)
T d1pffa_           2 ALEGKIAKLEH--------AEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             HHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecc---
Confidence            58899999862        46788899999999999999999999999999999876444    4567888887753   


Q ss_pred             CCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHH-HhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631          166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA-RKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV  244 (421)
Q Consensus       166 ~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  244 (421)
                          -|.+.++++++++++.|++..|.||+..+.+   ++++++++ +++|+++|+|..++....    ..++ .++.+ 
T Consensus        71 ----~d~~~~~~~i~~~t~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~----~~pl-~~GaD-  137 (331)
T d1pffa_          71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPIL----TNPL-DLGVD-  137 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHH----CCGG-GGTCS-
T ss_pred             ----cchhhHhhhcccccceeeeeccccccccccc---chhhhhhhhcccCceEEeecccccccc----cccc-ccCCC-
Confidence                2778999999999999999999999999955   66666664 678999999999875331    1122 23333 


Q ss_pred             CEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHH--hhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631          245 PVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSI--KGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDI  320 (421)
Q Consensus       245 ~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  320 (421)
                        |++.|.+|.++..+-- .|+++++        ++.....  ..... .....++.....+...++.     +..+.++
T Consensus       138 --iVv~S~TKy~~Gh~d~~~G~v~~~--------~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----l~~Rm~~  202 (331)
T d1pffa_         138 --IVVHSATKYINGHTDVVAGLVCSR--------ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKR  202 (331)
T ss_dssp             --EEEEETTTTTSSSSSCCCEEEEEC--------HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHH
T ss_pred             --EEEecchhhcCCCCcccccccccc--------ccchhhhhhhhhhhccCCCCCHHHHHHHHHHHHH-----HHHHHHH
Confidence              8899999998765444 4555553        1222322  22222 2345666666666555554     6677788


Q ss_pred             HHHHHHHHHHHhhcCCCccccCCC
Q 014631          321 LRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       321 ~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      ..++...+.+.|+++|.+.-+.+|
T Consensus       203 ~~~nA~~lA~~L~~hp~V~~V~yP  226 (331)
T d1pffa_         203 AAENAQKVAEFLHEHKAVKKVYYP  226 (331)
T ss_dssp             HHHHHHHHHHHHHHCTTCCCEECT
T ss_pred             HHHHHHHHHHhhhhCCcEEeeccc
Confidence            889999999999998887645454

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.81  E-value=1e-18  Score=165.76  Aligned_cols=295  Identities=11%  Similarity=0.109  Sum_probs=187.7

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC-CC
Q 014631           90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLP-EK  166 (421)
Q Consensus        90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~  166 (421)
                      .+...+..++.+..|  .+.....+..|+++++..++.++.  .+++.|+++...|+++...+...|.+++.++..+ ++
T Consensus       113 ~~~~~~~~~~~~~~g--~~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~  190 (434)
T d2z67a1         113 ALTNKILESFFKQLG--LNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGD  190 (434)
T ss_dssp             HHHHHHHHHHHHHTT--CCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETT
T ss_pred             HHHHHHHHHHHHhcC--CCcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCC
Confidence            344444455555454  223345556667777777766653  3789999999999999999999999988886433 33


Q ss_pred             CccCCHHHHHhhhcc-----CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccccc-CCCCccccccc
Q 014631          167 GWEVDLDGLEALADE-----NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF-GSTPYVRMGVF  240 (421)
Q Consensus       167 ~~~~d~e~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~  240 (421)
                      .+.+|+++|++.+.+     ++.+++.+.|++++|.+   +++++|+++|++||+++++|++|+.+.. .+.........
T Consensus       191 ~~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~---~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~  267 (434)
T d2z67a1         191 RVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY  267 (434)
T ss_dssp             EEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS
T ss_pred             ccCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccc---cCHHHHHHHHHHhCCeEEEeccchhhhhhccccccccccC
Confidence            467999999998853     56677888999999999   6699999999999999999999976331 11111111222


Q ss_pred             CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccccc-CCchHHHHHHHHHhhccchhHHHHHHH
Q 014631          241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQGAVPQIFKNTKEDFFSKIVD  319 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~  319 (421)
                      ..   .+++.|++|.++.+ ...|++..++       +.+.+++........ ..+.....+....+   ...++.+..+
T Consensus       268 ~~---D~~~~s~hK~l~~~-~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~---~~~g~~~~~~  333 (434)
T d2z67a1         268 RV---DAVVSSSDKNLLTP-IGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVSLLSM---GSKNYLELVK  333 (434)
T ss_dssp             CC---SEEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred             Cc---ceEEEcCccccccC-CCccccccCc-------HHHHHHHHhhcccccccchHHHHHHHHHHH---HHhcchhHHH
Confidence            22   26788999986543 3356666653       346666665543322 22222222222223   2355666677


Q ss_pred             HHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC-----------CC
Q 014631          320 ILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG-----------MA  385 (421)
Q Consensus       320 ~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g-----------~~  385 (421)
                      +..++.+++.+.|+++   .+..+. .........+.++.       +..++...| .+.||....+           ..
T Consensus       334 ~~~~~a~~l~~~L~~l~~~~g~~ll-~~~~~~~~~~~~~~-------~~~~l~~~L-~~~gI~g~~v~~~l~~~g~~~~~  404 (434)
T d2z67a1         334 NQKNSKKLLDELLNDLSKKTGGKFL-DVESPIASCISVNS-------DPVEIAAKL-YNLRVTGPRGIKKTDHFGNCYLG  404 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCCBC-CCCCSSEEEEECSS-------CHHHHHHHH-HHTTEESCEEECTTCHHHHTCSS
T ss_pred             HHHHHHHHHHHHHHHhhhhcCceec-CCCCCceeeeecCC-------CHHHHHHHH-HHcCCeeeehhhhccccCeeeec
Confidence            7777777777777654   255522 22222233333432       455665554 6678853211           11


Q ss_pred             CCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          386 VGMKNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       386 ~~~~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      +...+++|++++  +++|||++++++|++
T Consensus       405 ~~~~~~l~~~~s~~~T~edID~~i~~L~k  433 (434)
T d2z67a1         405 TYTHDYIVMNAAIGVRTEDIVNSVSKLEK  433 (434)
T ss_dssp             CCSCCEEEEECCTTCCHHHHHHHHHHHHT
T ss_pred             ccCCCeEEEecCCCCCHHHHHHHHHHHhc
Confidence            233678999987  799999999999876

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.81  E-value=1.2e-18  Score=165.37  Aligned_cols=342  Identities=14%  Similarity=0.043  Sum_probs=202.3

Q ss_pred             CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631           42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE---FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC  118 (421)
Q Consensus        42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~  118 (421)
                      .|+.++||..|......+ ..+|.+.+++.++++...   ...+. ......+.+.+++.+....+  ...+.++++++|
T Consensus        51 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~~~~-~~~~~~~a~~lae~l~~~~~--~~~~~v~f~~sG  126 (461)
T d1ohwa_          51 DGNRMLDLYSQISSIPIG-YSHPALVKLVQQPQNVSTFINRPALG-ILPPENFVEKLRESLLSVAP--KGMSQLITMACG  126 (461)
T ss_dssp             TSCEEEESSHHHHTCSSC-BTCHHHHHHHHCGGGHHHHHCCCCTT-TSCBTTHHHHHHHTGGGGCC--TTCCEEEEESSH
T ss_pred             CCCEEEEcccCHHHHhhc-CCcHHHHHHHHHHHhhhhhccccccc-ccchHHHHHHHHHHHHhhhc--cCcceeeeecch
Confidence            478889987664332222 467889999988776421   11111 11123456667776654332  245689999999


Q ss_pred             HHHHHHHHHHhc----------------------------CCCCeEEEcCCCCcchHHHHhhcCcee------------E
Q 014631          119 KQAIQVILTVLA----------------------------RPGANILLPKPGFPLYEANARHTRLEI------------R  158 (421)
Q Consensus       119 ~~al~~~~~~l~----------------------------~~gd~Vl~~~p~y~~~~~~~~~~g~~~------------~  158 (421)
                      ++|+..+++...                            .+..+|+....+|++....+.......            .
T Consensus       127 seAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~  206 (461)
T d1ohwa_         127 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP  206 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCC
T ss_pred             hhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCc
Confidence            999999887642                            123579999999998654444322110            0


Q ss_pred             eeeccCC-CCc-----------cCCHHHHHhhhc-----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEE
Q 014631          159 HFDLLPE-KGW-----------EVDLDGLEALAD-----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVI  219 (421)
Q Consensus       159 ~~~~~~~-~~~-----------~~d~e~l~~~~~-----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li  219 (421)
                      ..+.... ...           ..+.+++++.+.     ++..+.++..| +...|. ..|++.+++|.++|++||+++|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI  286 (461)
T d1ohwa_         207 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL  286 (461)
T ss_dssp             EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             ccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCccee
Confidence            0110000 000           012344444432     24455567777 555564 4678889999999999999999


Q ss_pred             EcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCch
Q 014631          220 SDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPAT  296 (421)
Q Consensus       220 ~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  296 (421)
                      +||+++++.+.|..+ ....++.  ...++   +++|.++.     |+.....         ........ ...+.+.++
T Consensus       287 ~DEV~tG~gRtG~~~-~~e~~gi~~~PDiv---~~gK~l~~-----g~~~~~~---------~~~~~~~~~~~~T~~g~p  348 (461)
T d1ohwa_         287 VDEVQTGGGSTGKFW-AHEHWGLDDPADVM---TFSKKMMT-----GGFFHKE---------EFRPNAPYRIFNTWLGDP  348 (461)
T ss_dssp             EECTTTCSSTTSSSS-GGGGGCCSSCCSEE---EECGGGSS-----EEEEECG---------GGSCSSTTSSCCSCSSCH
T ss_pred             ccccccccccccccc-cccccccccCchhh---hhhhcccc-----ccccccc---------cccccccccccccccccc
Confidence            999999998777633 3333332  22233   67898532     3333321         11111111 123457788


Q ss_pred             HHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHh
Q 014631          297 FVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEIPC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAK  374 (421)
Q Consensus       297 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  374 (421)
                      ++.+++.++|+...+ ..+++..+.-+...+.+.+...+.|. +..+ . ..|++..++++...     ...+++.. +.
T Consensus       349 ~~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~v-r-G~Gl~~~ie~~~~~-----~~~~i~~~-~~  420 (461)
T d1ohwa_         349 SKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRV-R-GRGTFCSFDTPDES-----IRNKLISI-AR  420 (461)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-E-EETTEEEEECSSHH-----HHHHHHHH-HH
T ss_pred             ccchhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEe-e-eeeEEEEEEcCCHH-----HHHHHHHH-HH
Confidence            888888888876432 23333333333344444444444443 2212 1 23566777776532     13345554 56


Q ss_pred             hcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          375 EESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       375 ~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ++||++.+..    .+.||+.++  .+++++++++++|.+++.++
T Consensus       421 ~~Gll~~~~~----~~~ir~~PpL~it~~eid~~~~~l~~~l~ef  461 (461)
T d1ohwa_         421 NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADF  461 (461)
T ss_dssp             HTTEECEEET----TTEEECCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             HCCeEEeeCC----CCEEEEeCCcCCCHHHHHHHHHHHHHHHhcC
Confidence            7799998743    468999876  78999999999999999763

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=2.9e-17  Score=151.27  Aligned_cols=229  Identities=19%  Similarity=0.163  Sum_probs=160.1

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631           87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL  162 (421)
Q Consensus        87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~  162 (421)
                      ....|++.++++-+        .+..+++++|+.|+..++..++++||+|++++..|.+....+    ...|.++..+..
T Consensus        59 T~~~LE~~la~LE~--------~~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~  130 (421)
T d2ctza1          59 TVDVLEKRLAALEG--------GKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR  130 (421)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred             HHHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceeccc
Confidence            35688888888762        456888999999999999999999999999999998775544    467887776642


Q ss_pred             cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631          163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                      .      -..+..++.+++++++|++..|.||+..+   .++++|+++|+++|+++|+|..++..   +-.+.++ .++.
T Consensus       131 ~------~~~~~~~~~~~~~t~li~~EtpsNP~l~v---~Di~~i~~iA~~~g~~~vvDnT~a~t---P~~~~Pl-~~Ga  197 (421)
T d2ctza1         131 E------ERPEEFLALTDEKTRAWWVESIGNPALNI---PDLEALAQAAREKGVALIVDNTFGMG---GYLLRPL-AWGA  197 (421)
T ss_dssp             T------CCHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHHHHTCEEEEECGGGGG---GTSCCGG-GGTC
T ss_pred             c------cCcchhccccCCCceEEEEcCCCcceeEe---cchHHHHHHHHhcCCceEeccccccc---ceecccc-ccCC
Confidence            1      14456677788899999999999999999   56999999999999999999998631   1112232 3333


Q ss_pred             CCCEEEEcccccccCCCCceE-EEEEeeCCCcchh-----------------------HHHHHHHHh-h-hcccccCCch
Q 014631          243 TVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQ-----------------------ELRIVDSIK-G-YLNISSGPAT  296 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~-----------------------~~~~~~~~~-~-~~~~~~~~~~  296 (421)
                      +   |++.|.+|.++.-+--+ |.++.++......                       ...++.+.. . ........++
T Consensus       198 D---iVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~sP  274 (421)
T d2ctza1         198 A---LVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGP  274 (421)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCH
T ss_pred             c---EEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCCH
Confidence            3   88999999987755544 5555433211100                       000111111 1 1123346677


Q ss_pred             HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631          297 FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP  344 (421)
Q Consensus       297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  344 (421)
                      .....+...|+.     +.-+.++..++...+.+.|+++|.+.-+..|
T Consensus       275 ~~a~l~~rgl~T-----L~lRm~~~~~nA~~vA~~L~~hp~V~~V~yP  317 (421)
T d2ctza1         275 FEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYP  317 (421)
T ss_dssp             HHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHhcCCcc-----hhhHHHHHHHHHHHHHhhhccCCCeeEEecC
Confidence            777776666654     6677788889999999999998876534444

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.80  E-value=7.3e-17  Score=147.95  Aligned_cols=281  Identities=14%  Similarity=0.142  Sum_probs=191.0

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~  163 (421)
                      ...|++.++++-+        .+..+.+++|+.|+..++.+++++||.|++.+..|.+....    ....|.++..+.. 
T Consensus        61 ~~~le~~la~LEg--------~~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~-  131 (394)
T d1e5ea_          61 VSNLEGKIAFLEK--------TEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINT-  131 (394)
T ss_dssp             HHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-
T ss_pred             HHHHHHHHHHHhC--------CcceeeeccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeeccCC-
Confidence            4578888888652        45788889999999999999999999999999999775433    4567888877753 


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHH-hcCcEEEEcccccccccCCCCcccccccCC
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR-KLGIMVISDEVYDHLTFGSTPYVRMGVFGS  242 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~  242 (421)
                            -|.+++++.+++++++|++..|.||+..+.   +++++++.++ ++|+++|+|..++...    ...++ .++.
T Consensus       132 ------~d~~~~~~~i~~~t~lv~~Etp~NP~l~v~---Di~~~~~~~~~~~g~~vvvDnT~atP~----~~~Pl-~~Ga  197 (394)
T d1e5ea_         132 ------AIPGEVKKHMKPNTKIVYFETPANPTLKII---DMERVCKDAHSQEGVLVIADNTFCSPM----ITNPV-DFGV  197 (394)
T ss_dssp             ------TSTTHHHHHCCTTEEEEEEESSCTTTCCCC---CHHHHHHHHHTSTTCEEEEECTTTCTT----TCCGG-GGTC
T ss_pred             ------CCHHHHHHhhcccccEEEEeccCCcceeee---hhhhhhhccccccCeEEEecCcccCcc----cCCch-hcCC
Confidence                  267889999999999999999999999995   4777777665 5689999999987522    12232 3333


Q ss_pred             CCCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHH--hhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631          243 TVPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSI--KGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV  318 (421)
Q Consensus       243 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (421)
                      +   |++.|.+|.++..+- -.|.++++        .+.....  ..... .....++.....+...|+.     +.-+.
T Consensus       198 D---iVvhS~TKy~~GhsDv~~G~v~~~--------~~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~T-----L~lRm  261 (394)
T d1e5ea_         198 D---VVVHSATKYINGHTDVVAGLICGK--------ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRM  261 (394)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEEC--------HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             C---EEEechhhhcCCCcccccccccch--------hhHHHHHHHHHHHHhhCCCCChHHHHHHHhhchh-----HHHHH
Confidence            3   889999999876443 35656654        2333332  22222 2345677777776666654     66778


Q ss_pred             HHHHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631          319 DILRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP  382 (421)
Q Consensus       319 ~~~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  382 (421)
                      ++..++...+.+.|+++|.+.-+..|.                +|..+.+.+..        ..+...++++.-.++. .
T Consensus       262 ~r~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf~~~~--------~~~~a~~f~~~l~l~~-~  332 (394)
T d1e5ea_         262 KAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS--------GFEGAKKLLDNLKLIT-L  332 (394)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--------HHHHHHHHHHTCSSSE-E
T ss_pred             HHHHHHHHHHHHHHhhcCCccEEeCCCcccccchhhhhcccccCCCeeeeeccC--------CHHHHHHHHHhCCccc-e
Confidence            888899999999999988765444441                12233344432        3333445555545432 2


Q ss_pred             CCCCCC---------------------------CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631          383 GMAVGM---------------------------KNWLRITFAIEPSALEEGLGRIKAFCQRHA  418 (421)
Q Consensus       383 g~~~~~---------------------------~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~  418 (421)
                      +..+|.                           ++.||+|++.  |+.+.+++.|.++++++.
T Consensus       333 a~SlGg~eSLi~~p~~~th~~~~~~~r~~~Gi~~~liRlSVGl--Ed~eDLi~Dl~qAl~~l~  393 (394)
T d1e5ea_         333 AVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQGLDALL  393 (394)
T ss_dssp             SSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHH
T ss_pred             eeccCCccceeECccccccccCCHHHHHhcCCCcCEEEEEecc--CCHHHHHHHHHHHHHHhh
Confidence            222211                           3579999995  455666777777776654

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.80  E-value=7.6e-17  Score=148.25  Aligned_cols=347  Identities=12%  Similarity=0.029  Sum_probs=231.2

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcE-EEcC
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDV-YLTA  116 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i-~~~~  116 (421)
                      ..-|+|-...      -..++.+.+++...+.+....+      |+-..-+.+++....+...+.|+...+...+ +=..
T Consensus        31 ~~~l~LIaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~  104 (470)
T d1rv3a_          31 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY  104 (470)
T ss_dssp             HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             HcCceEecCC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhcccccccc
Confidence            5557776443      2467889998887776532222      3334446788888878888877733222222 2246


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----------hhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceE
Q 014631          117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANA----------RHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVA  185 (421)
Q Consensus       117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----------~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~  185 (421)
                      +|+.|+..++.+|++|||+|+..+..+.++....          .....+...+++++++ +.+|.|++++..+. ++++
T Consensus       105 SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~~-~~IDyd~l~~~a~~~kPkl  183 (470)
T d1rv3a_         105 SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDT-GYIDYDRLEENARLFHPKL  183 (470)
T ss_dssp             SHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTT-CSBCHHHHHHHHHHHCCSE
T ss_pred             CCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEeccc-CcccHHHHHHHHHhhCcce
Confidence            7888999999999999999999876665443221          1112456777776654 46999999987654 6777


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG  264 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  264 (421)
                      |++..-.+|-=     -+++++.++|++.|.++++|.+|.. +..+|....|+...  +   ++.+|.+|+|  +|.|.|
T Consensus       184 Ii~G~S~y~r~-----~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~a--D---vvt~tTHKtl--rGPrgG  251 (470)
T d1rv3a_         184 IIAGTSCYSRN-----LDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHC--H---VVTTTTHKTL--RGCRAG  251 (470)
T ss_dssp             EEECCSSCCSC-----CCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTC--S---EEEEESSGGG--CCCSCE
T ss_pred             Eeechhhcccc-----CCHHHHHHHHhccCCeEEecchhhhhhccccccCChhhee--e---eeeeehhhhc--cCCcce
Confidence            76544444432     2478888899999999999999944 44455555555332  2   7788999994  788899


Q ss_pred             EEEeeCCCcchh-------HHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631          265 WLVTSDPSGILQ-------ELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI  335 (421)
Q Consensus       265 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  335 (421)
                      .+++.+...-.+       ..++.+++......  .+++.....++.+.++.......+.+..++..++...+.+.|.+.
T Consensus       252 iI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk~La~~L~~~  331 (470)
T d1rv3a_         252 MIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL  331 (470)
T ss_dssp             EEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999865310000       01366666666432  234444445555555554344567888999999999999999987


Q ss_pred             CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE----eCCC-CCCCCeEEEEec------CCHHHHH
Q 014631          336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL----PGMA-VGMKNWLRITFA------IEPSALE  404 (421)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~-~~~~~~iRi~~~------~~~e~l~  404 (421)
                       |+.++.....+..+++.+....+     +...+..+|++.||.+.    |+.. ...++.+||...      ..++|+.
T Consensus       332 -G~~v~~ggTdnHlvlvdl~~~g~-----~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~dm~  405 (470)
T d1rv3a_         332 -GYKIVTGGSDNHLILVDLRSKGT-----DGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQ  405 (470)
T ss_dssp             -TCEEGGGSCSSSEEEEEGGGGTC-----CHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHH
T ss_pred             -CceeccCCCCCceEEEeecccCC-----cHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHHHHH
Confidence             88866566667788888764322     34456677899999886    3321 112578999975      4678999


Q ss_pred             HHHHHHHHHHH
Q 014631          405 EGLGRIKAFCQ  415 (421)
Q Consensus       405 ~~~~~l~~~~~  415 (421)
                      ++.+.|.++++
T Consensus       406 ~iA~~I~~~l~  416 (470)
T d1rv3a_         406 KVAHFIHRGIE  416 (470)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999988874

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.79  E-value=5.5e-17  Score=148.67  Aligned_cols=345  Identities=14%  Similarity=0.038  Sum_probs=215.3

Q ss_pred             CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCc--E-EE
Q 014631           44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDD--V-YL  114 (421)
Q Consensus        44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~--i-~~  114 (421)
                      ..-|+|-...      -..++.+.+++...+.+....+      |+..+-+.+++....+...+.|+..  ...  + +=
T Consensus        27 ~~~l~LiaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~--~a~w~vNVq   98 (463)
T d2a7va1          27 CRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLD--PAQWGVNVQ   98 (463)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCC--TTTEEEECC
T ss_pred             hcCeeEeccC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCC--chhccCCcc
Confidence            4557775443      2467889998887776532222      3344457788888788887777733  332  1 22


Q ss_pred             cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH--------hhcC--ceeEeeeccCCCCccCCHHHHHhhhcc-Cc
Q 014631          115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA--------RHTR--LEIRHFDLLPEKGWEVDLDGLEALADE-NT  183 (421)
Q Consensus       115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~  183 (421)
                      ..+++.|+..++.+|++|||+|+..++.+.++...-        ...|  .+...+.++++ +..+|.|++++.+.. ++
T Consensus        99 p~SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~-~~~IDyd~~~~~a~~~kP  177 (463)
T d2a7va1          99 PYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLFRP  177 (463)
T ss_dssp             CSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTT-TCSBCHHHHHHHHHHHCC
T ss_pred             ccccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCC-CCcCcHHHHHHHHhhcCC
Confidence            456778888899999999999999887765543221        1122  23445555443 346999999997654 67


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc-ccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631          184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD-HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR  262 (421)
Q Consensus       184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  262 (421)
                      ++|++..-.+|--.     +++++.++|++.|.++++|.+|. ++..+|....|+...  +   ++.+|.+|+|  +|.|
T Consensus       178 klIi~G~S~y~r~~-----d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~~a--D---vvt~tTHKTl--rGPr  245 (463)
T d2a7va1         178 RLIIAGTSAYARLI-----DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA--D---IVTTTTHKTL--RGAR  245 (463)
T ss_dssp             SEEEECCSSCCSCC-----CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTC--S---EEEEESSGGG--CSCS
T ss_pred             ceEEeccccccccc-----CHHHHHHHhhcccceEEechhhhhHHhhhhhhcChhhhh--h---hhhchhhhhh--cCCC
Confidence            77665444444433     38888889999999999999994 455555555555332  2   7788999994  7889


Q ss_pred             EEEEEeeCCCcchh-------HHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631          263 LGWLVTSDPSGILQ-------ELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK  333 (421)
Q Consensus       263 ~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (421)
                      .|.+++.+......       ..++.+++......  .+++.....++.+.++.......+++..++..++...|.+.|.
T Consensus       246 gGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~L~  325 (463)
T d2a7va1         246 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALL  325 (463)
T ss_dssp             CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence            99999875310000       00245666555432  2344444444444455433346678888999999999999999


Q ss_pred             cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------CCHHH
Q 014631          334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------IEPSA  402 (421)
Q Consensus       334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------~~~e~  402 (421)
                      +. |+.++.....+..+++++....     -+...++..|++.||.+.--..++     .++.+||...      ..++|
T Consensus       326 ~~-G~~vv~ggTdnHlvlvdl~~~~-----~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~d  399 (463)
T d2a7va1         326 ER-GYSLVSGGTDNHLVLVDLRPKG-----LDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDD  399 (463)
T ss_dssp             HT-TCEEGGGSCSSSEEEEECTTTT-----CCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHH
T ss_pred             hC-CCeeecCCCCCceeeeeccccC-----CCHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHH
Confidence            87 8886656677778888875432     134456677899999986433221     2568999975      35789


Q ss_pred             HHHHHHHHHHHHH
Q 014631          403 LEEGLGRIKAFCQ  415 (421)
Q Consensus       403 l~~~~~~l~~~~~  415 (421)
                      +.++.+.|.+++.
T Consensus       400 m~~iA~~I~~~l~  412 (463)
T d2a7va1         400 FRRVVDFIDEGVN  412 (463)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988774

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.79  E-value=1.3e-17  Score=159.42  Aligned_cols=317  Identities=10%  Similarity=0.023  Sum_probs=180.3

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh-cCceeEeeec
Q 014631           84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH-TRLEIRHFDL  162 (421)
Q Consensus        84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~  162 (421)
                      +..-+.++++.+|++++      . .+.+++++|+++++.+++.++++|||+|+++..+|.+....+.. .+..+++.+.
T Consensus        64 ~~~~i~eae~~~A~~~g------a-~~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~  136 (462)
T d1c4ka2          64 HEGPAVAAEKHAARVYN------A-DKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQT  136 (462)
T ss_dssp             TBTHHHHHHHHHHHHTT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECE
T ss_pred             CCHHHHHHHHHHHHHhC------C-CeEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeec
Confidence            33346799999999984      2 23345556667777888889999999999999999988765544 3444444432


Q ss_pred             --cCCCC-cc-----CCHHHH---------HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc
Q 014631          163 --LPEKG-WE-----VDLDGL---------EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD  225 (421)
Q Consensus       163 --~~~~~-~~-----~d~e~l---------~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~  225 (421)
                        ++... ..     ++.+.+         ++....+++.+++...+|-.|.+.   ++++|+++|+++|+++++|++|+
T Consensus       137 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~---dl~~I~~ia~~~g~~l~vD~A~~  213 (462)
T d1c4ka2         137 NRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIY---NAHEVVKRIGHLCDYIEFDSAWV  213 (462)
T ss_dssp             EECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEE---CHHHHHHHHGGGBSEEEEECTTC
T ss_pred             ccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchh---hHHHHHHHHHHcCCEEEEechhh
Confidence              22111 11     222222         223344556565666666799994   48889999999999999999997


Q ss_pred             ccccCCCC-cccccccCC-----CCCEEEEcccccccCCCCceEEEEEeeCCCcch------hHHHHHHHHhhhcccccC
Q 014631          226 HLTFGSTP-YVRMGVFGS-----TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL------QELRIVDSIKGYLNISSG  293 (421)
Q Consensus       226 ~~~~~~~~-~~~~~~~~~-----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  293 (421)
                      ........ .........     ....+++.|+||+++.++  .|.++..+.....      ....+.+.....  .+++
T Consensus       214 ~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~--~t~s  289 (462)
T d1c4ka2         214 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLF--MSTS  289 (462)
T ss_dssp             CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHH--SCSS
T ss_pred             ccccccCcCCcchhhccccccccCCccEEEEecCccccccc--ceEEEEeccccccccchhhhHHHHHHhhhhc--ccCC
Confidence            75422211 111111111     112477889999976554  3545443322110      001111111111  2345


Q ss_pred             CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC---------------------------C--
Q 014631          294 PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK---------------------------P--  344 (421)
Q Consensus       294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~---------------------------~--  344 (421)
                      ++......+..+.........++..++..++.+++++.+.++++......                           |  
T Consensus       290 p~~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (462)
T d1c4ka2         290 PFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGA  369 (462)
T ss_dssp             CCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTC
T ss_pred             chHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcc
Confidence            66555555555444323344556666777777888888776533210000                           0  


Q ss_pred             --------CceeE------EEEecCcccc------cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631          345 --------EGSMF------VMVKLNLSLL------EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA  402 (421)
Q Consensus       345 --------~~~~~------~~~~~~~~~~------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~  402 (421)
                              ....+      +.+..+....      ..+..... +.+.++++||.+...    ....+|++++  +|+++
T Consensus       370 ~~~~~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~-~~~~L~~~gI~~e~~----~~~~i~~~~s~~~T~ed  444 (462)
T d1c4ka2         370 KWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATI-VANYLRDHGIIPEKS----DLNSILFLMTPAETPAK  444 (462)
T ss_dssp             TTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHH-HHHHHHHTTCCCSEE----CSSEEEEECCTTCCHHH
T ss_pred             hhccccccCccceecccceeEEecCCccccccchhhcCCcHHH-HHHHHHHcCCeeecc----CCCeEEEEecCCCCHHH
Confidence                    00000      1122211100      00112334 445568899976432    2467999987  89999


Q ss_pred             HHHHHHHHHHHHHHhhh
Q 014631          403 LEEGLGRIKAFCQRHAK  419 (421)
Q Consensus       403 l~~~~~~l~~~~~~~~~  419 (421)
                      +++++++|.++.+.+.+
T Consensus       445 id~li~aL~ei~r~~~~  461 (462)
T d1c4ka2         445 MNNLITQLLQLQRLIEE  461 (462)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999877643

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.76  E-value=2.1e-16  Score=146.34  Aligned_cols=313  Identities=12%  Similarity=0.103  Sum_probs=203.0

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCC--CeEEE
Q 014631           62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPG--ANILL  138 (421)
Q Consensus        62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~g--d~Vl~  138 (421)
                      ..++-.+++.+.++.+.+ ..++  ...++++.++++++        ...++++++||.|+.+++.++. .+|  |+|++
T Consensus        10 ~~~~~~~~v~~~l~~~~~-~~G~--~v~~fE~~~~~~~g--------~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~   78 (371)
T d2fnua1          10 LDKEDKKAVLEVLNSKQL-TQGK--RSLLFEEALCEFLG--------VKHALVFNSATSALLTLYRNFSEFSADRNEIIT   78 (371)
T ss_dssp             CCHHHHHHHHHHHTSSCC-SSSH--HHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEE
T ss_pred             CCHHHHHHHHHHHcCCCc-cCCH--HHHHHHHHHHHHHC--------cCeEEEEecHHHHHHHHHHHhcccCCCCCeeec
Confidence            346667888888877543 2333  36899999999984        3468899999999999999884 344  58999


Q ss_pred             cCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEE
Q 014631          139 PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV  218 (421)
Q Consensus       139 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~l  218 (421)
                      +..+|.+...++...|++++.++++++.  ..+.+++++.+.+++++|++++   ..|..   .++.+|.++|+++|+++
T Consensus        79 p~~t~~a~~~ai~~~G~~pv~vDi~~~~--~~~~~~~~~~~~~~t~avi~vh---~~G~~---~~~~~i~~~~~~~~i~l  150 (371)
T d2fnua1          79 TPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVD---YAGKS---VEVESVQKLCKKHSLSF  150 (371)
T ss_dssp             CSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEEC---GGGCC---CCHHHHHHHHHHHTCEE
T ss_pred             ccccccccceeeeccCcccccccccccc--cccchhhhhhccchhhcccccc---ccccc---cccccccccccccchhh
Confidence            9999999999999999999999886543  3567888888888999987654   56776   45788889999999999


Q ss_pred             EEcccccccccCCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc------
Q 014631          219 ISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI------  290 (421)
Q Consensus       219 i~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~------  290 (421)
                      |+|.+|+.+..-...  .....+    .+.+.||  +|.+...+  .|.+++++       +++.+.+......      
T Consensus       151 IEDaaqa~Ga~~~~~--~~G~~g----~~~~~Sf~~~K~l~~g~--GG~i~t~~-------~~~~~~~~~~~~~g~~~~~  215 (371)
T d2fnua1         151 LSDSSHALGSEYQNK--KVGGFA----LASVFSFHAIKPITTAE--GGAVVTND-------SELHEKMKLFRSHGMLKKD  215 (371)
T ss_dssp             EEECTTCTTCEETTE--ETTSSS----SEEEEECCTTSSSCCSS--CEEEEESC-------HHHHHHHHHHTBTTEEESS
T ss_pred             ccchhhccCceeccc--cCCccc----ccccccccccccccccc--ceEEEeec-------hhhhhhccccccccccccc
Confidence            999999885422111  111222    1445566  58754433  57777764       3455555443211      


Q ss_pred             -----------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC---Cce-eEEEEecC
Q 014631          291 -----------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP---EGS-MFVMVKLN  355 (421)
Q Consensus       291 -----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~---~~~-~~~~~~~~  355 (421)
                                 ....+.+..+.+..-|+     .+++..++-+++.+.+.+.|++.+++..+..+   ... ..+.+.++
T Consensus       216 ~~~~~~~~~G~n~r~sel~Aaigl~qL~-----~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  290 (371)
T d2fnua1         216 FFEGEVKSIGHNFRLNEIQSALGLSQLK-----KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMH  290 (371)
T ss_dssp             SSCEEESSCCCBCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEEC
T ss_pred             ccccccccccccccccchhhhhhhhhhh-----hccchhhhhhhhhhhhccccccccccccccccccccccccccccccc
Confidence                       11233333333333343     25555556667777788888887665522111   111 22333343


Q ss_pred             cccccCCCChHHHHHHHHhhcCeeEEeCCCC-----------CC----------CCeEEEEec--CCHHHHHHHHHHHHH
Q 014631          356 LSLLEGISDDMEFALQLAKEESVIVLPGMAV-----------GM----------KNWLRITFA--IEPSALEEGLGRIKA  412 (421)
Q Consensus       356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~----------~~~iRi~~~--~~~e~l~~~~~~l~~  412 (421)
                      ....    ...+.+.+.|+++||-+.+....           ..          ...+.+-+.  .+.+|++..++.|.+
T Consensus       291 ~~~~----~~r~~~~~~L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~  366 (371)
T d2fnua1         291 QKFF----TCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLK  366 (371)
T ss_dssp             GGGG----GGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             ccch----hHHHHHHHHHHHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHH
Confidence            3211    23444444567889988765321           00          123444333  588999999999999


Q ss_pred             HHHHh
Q 014631          413 FCQRH  417 (421)
Q Consensus       413 ~~~~~  417 (421)
                      +++++
T Consensus       367 ~~~~~  371 (371)
T d2fnua1         367 TFESF  371 (371)
T ss_dssp             HHHHH
T ss_pred             HHHcC
Confidence            98764

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=3.9e-16  Score=142.86  Aligned_cols=212  Identities=18%  Similarity=0.125  Sum_probs=150.3

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeecc
Q 014631           88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLL  163 (421)
Q Consensus        88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~  163 (421)
                      ...|++.++++-        ..+..+++++|+.|+..++ .++.+||+|++....|.+....+.    ..|.++..+.  
T Consensus        57 ~~~lE~~la~LE--------~~~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~--  125 (393)
T d1n8pa_          57 RENLERAVAALE--------NAQYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN--  125 (393)
T ss_dssp             HHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES--
T ss_pred             HHHHHHHHHHHh--------CCceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee--
Confidence            467778887774        2456677788889997665 556889999999999988765554    4566555442  


Q ss_pred             CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHH----hcCcEEEEcccccccccCCCCcccccc
Q 014631          164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR----KLGIMVISDEVYDHLTFGSTPYVRMGV  239 (421)
Q Consensus       164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~~  239 (421)
                            .+.+++++.+++++++|++-.|.||+..+.   ++++|+++|+    ++|+++|+|..++.-..    ..++ .
T Consensus       126 ------~~~~~~~~~i~~~t~lv~~EspsNP~l~v~---Di~~ia~~a~~~~~~~g~~lvVDnT~atP~~----~~Pl-~  191 (393)
T d1n8pa_         126 ------DLLNDLPQLIKENTKLVWIETPTNPTLKVT---DIQKVADLIKKHAAGQDVILVVDNTFLSPYI----SNPL-N  191 (393)
T ss_dssp             ------SHHHHHHHHSCSSEEEEEECSSCTTTCCCC---CHHHHHHHHHHHTTTTTCEEEEECTTTHHHH----CCGG-G
T ss_pred             ------cchHHHHHHhhhhcceeEecCcchhhhhcc---chhhhhhhhhhhcccCCceEEEecCccCccc----CCch-h
Confidence                  245789999999999999999999999995   4777777777    78999999999865321    1122 2


Q ss_pred             cCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHH
Q 014631          240 FGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKI  317 (421)
Q Consensus       240 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~  317 (421)
                      ++.+   |++.|.+|.++..+ .-.|.++.++       +++.+++..... .....++.....+...|+.     +.-+
T Consensus       192 ~GAD---iVvhS~TKyi~GhsDv~~G~v~~~~-------~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T-----l~lR  256 (393)
T d1n8pa_         192 FGAD---IVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LHLR  256 (393)
T ss_dssp             GTCS---EEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred             hCCC---EEEEccccccCCCCccccceeeecc-------hhHHHHHHHHHhhcCCCCChHHHHHHHhCCcc-----hhhH
Confidence            3333   88999999987644 3456665543       345555655443 2345677777766666654     5667


Q ss_pred             HHHHHHHHHHHHHHhhcC-CCcc
Q 014631          318 VDILRDTADICYDRIKEI-PCIT  339 (421)
Q Consensus       318 ~~~~~~~~~~~~~~l~~~-~g~~  339 (421)
                      .++..++...+.+.|+.. |.+.
T Consensus       257 ~~~~~~nA~~lA~~L~~~~~~V~  279 (393)
T d1n8pa_         257 VRQAALSANKIAEFLAADKENVV  279 (393)
T ss_dssp             HHHHHHHHHHHHHHHTSCTTTEE
T ss_pred             HHHHHHHHHHHHHHHHhccCcEE
Confidence            778888888899999754 4444

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.75  E-value=1.8e-16  Score=147.13  Aligned_cols=309  Identities=12%  Similarity=0.086  Sum_probs=192.7

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCCCcc
Q 014631           67 ADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPGFPL  145 (421)
Q Consensus        67 ~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~  145 (421)
                      ++++.+.++.+.+.++|+.  ...+++.++++++        ....+++++||.|+.++++++ .++||+|+++..+|.+
T Consensus         4 ~~~~~~~l~~~~~~~~G~~--~~~fE~~~~~~~~--------~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a   73 (374)
T d1o69a_           4 LKYIEEVFKSNYIAPLGEF--VNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLASSFTFIA   73 (374)
T ss_dssp             HHHHHHHHHHTTTSCTTHH--HHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGG
T ss_pred             HHHHHHHHhcCCcCCCCHH--HHHHHHHHHHHHC--------cCeEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHh
Confidence            4677888887654445554  5899999999984        347899999999999999998 6899999999999999


Q ss_pred             hHHHHhhcCceeEeeeccCCCCccCCHHH--HHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631          146 YEANARHTRLEIRHFDLLPEKGWEVDLDG--LEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV  223 (421)
Q Consensus       146 ~~~~~~~~g~~~~~~~~~~~~~~~~d~e~--l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~  223 (421)
                      ....+...|++++.+.++++.. ..+.+.  +.....++++++++++.   .|..   .++.+|.++|+++|++||+|.+
T Consensus        74 ~~~~~~~~g~~pv~~Di~~~~~-~~~~~~~~~~~~~~~~~~aii~~~~---~G~~---~d~~~i~~~~~~~~i~vIED~a  146 (374)
T d1o69a_          74 SVAPICYLKAKPVFIDCDETYN-IDVDLLKLAIKECEKKPKALILTHL---YGNA---AKMDEIVEICKENDIVLIEDAA  146 (374)
T ss_dssp             GTHHHHHTTCEEEEECBCTTSS-BCHHHHHHHHHHCSSCCCEEEEECG---GGCC---CCHHHHHHHHHHTTCEEEEECT
T ss_pred             hHHHHhhccceeEecccccccc-cccccccccchhccccccccccccc---ccch---hhhHHHHHHhhccCcchhhhhh
Confidence            9999999999999998874322 233333  33455667888876554   4555   4688999999999999999999


Q ss_pred             cccccc-CCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc----------
Q 014631          224 YDHLTF-GSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI----------  290 (421)
Q Consensus       224 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~----------  290 (421)
                      ++.+.. .|.   .+..++    .+.+.||+  |.+...|  .|.+++.+       +++.+++......          
T Consensus       147 ~a~g~~~~~~---~~G~~g----d~~~fSf~~~K~l~tge--GG~i~tnn-------~~~~~~~~~~~~~g~~~~~~~~~  210 (374)
T d1o69a_         147 EALGSFYKNK---ALGTFG----EFGVYSYNGNKIITTSG--GGMLIGKN-------KEKIEKARFYSTQARENCLHYEH  210 (374)
T ss_dssp             TCTTCEETTE---ETTSSS----SEEEEECCTTSSSCCSS--CEEEEESC-------HHHHHHHHHHTBTCCCSSSSCCC
T ss_pred             hhhcceECCe---ecCCCC----ceEEEeccCcccccccc--ceeehhhh-------HHHHHhhcccccccccccccccc
Confidence            988542 221   222222    25566776  7754443  57777754       3455555433210          


Q ss_pred             -----ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc----e--eEEEEecCcccc
Q 014631          291 -----SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG----S--MFVMVKLNLSLL  359 (421)
Q Consensus       291 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~----~--~~~~~~~~~~~~  359 (421)
                           ....+.+..+.+..-|+.     +++..++-++..+.+.+.|.+...+. . .+..    .  ++..+..+....
T Consensus       211 ~~~G~N~rm~ei~Aaig~~qL~~-----l~~~i~~r~~i~~~y~~~L~~~~~~~-~-~~~~~~s~~~~~~~~~~~~~~~~  283 (374)
T d1o69a_         211 LDYGYNYRLSNVLGAIGVAQMEV-----LEQRVLKKREIYEWYKEFLGEYFSFL-D-ELENSRSNRWLSTALINFDKNEL  283 (374)
T ss_dssp             SSCCCBCBCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHTTTEECC-C-CCTTEECCCSSEEEEESCCGGGS
T ss_pred             ccCCccccccchhhhhhHHHHhh-----hhhhcchhHHHHHHHHhhcccccccc-c-cccCCCCChhheeeeeccccccc
Confidence                 012333333333333432     44555555666777778887652222 1 1111    1  112111111000


Q ss_pred             c-------------CCCChHHHHHHHHhhcCeeEEeCCCCCC--------------------CCeEEEEec--CCHHHHH
Q 014631          360 E-------------GISDDMEFALQLAKEESVIVLPGMAVGM--------------------KNWLRITFA--IEPSALE  404 (421)
Q Consensus       360 ~-------------~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------------------~~~iRi~~~--~~~e~l~  404 (421)
                      .             ......+.+...|+++||-+++....-.                    ...+.+-+.  .+++|++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~  363 (374)
T d1o69a_         284 NACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVY  363 (374)
T ss_dssp             CCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred             cccccccccchhhccchhhHHHHHHHHHHCCCCEEEeCcchhhChhhhcCCCCCCHHHHHHHhCEEECcCCCCCCHHHHH
Confidence            0             0011233344456888998876542100                    123444333  5899999


Q ss_pred             HHHHHHHHHHH
Q 014631          405 EGLGRIKAFCQ  415 (421)
Q Consensus       405 ~~~~~l~~~~~  415 (421)
                      ..++.|.++++
T Consensus       364 ~I~~~I~~~lk  374 (374)
T d1o69a_         364 EISKLILKSIK  374 (374)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHHC
Confidence            99999998863

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=4.5e-17  Score=155.67  Aligned_cols=316  Identities=14%  Similarity=0.096  Sum_probs=186.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCe---------EEEcCCCCcchHHHH
Q 014631           80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN---------ILLPKPGFPLYEANA  150 (421)
Q Consensus        80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~---------Vl~~~p~y~~~~~~~  150 (421)
                      ..|+..+.+.+|++.++++++        .+.++++++|++|+..++.+++++||.         +......|......+
T Consensus        68 ~~Y~~~~~~~~le~~~a~l~G--------~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~  139 (467)
T d2v1pa1          68 EAFSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHS  139 (467)
T ss_dssp             CCSSSCHHHHHHHHHHHHHTC--------CSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHH
T ss_pred             hhhcCCchHHHHHHHHHHHHC--------CCEEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHH
Confidence            368777778899999999973        457889999999999999998766654         334444444456667


Q ss_pred             hhcCceeEeeeccCC--------CCccCCHHHHHhhhcc----CceEEEEeCCCCCc-ccccCHHHHHHHHHHHHhcCcE
Q 014631          151 RHTRLEIRHFDLLPE--------KGWEVDLDGLEALADE----NTVAMVIVNPGNPC-GNVFTYQQLQKIAEKARKLGIM  217 (421)
Q Consensus       151 ~~~g~~~~~~~~~~~--------~~~~~d~e~l~~~~~~----~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~  217 (421)
                      ...|..++.++.+..        ....+|++++++.+.+    .+.++++.+.+|.. |.+++.+++++|.++|++||++
T Consensus       140 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~  219 (467)
T d2v1pa1         140 QINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIP  219 (467)
T ss_dssp             HHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCC
T ss_pred             HHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCE
Confidence            788988887765421        1245799999987753    34556666776644 6788999999999999999999


Q ss_pred             EEEcccccccc----------cCCCCccccc-ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh
Q 014631          218 VISDEVYDHLT----------FGSTPYVRMG-VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG  286 (421)
Q Consensus       218 li~De~~~~~~----------~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  286 (421)
                      +|+|+++....          +.+.....+. .+... ..++..|.+|.++.+  ..|+++.++ ....   ........
T Consensus       220 l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~K~~~~~--~gg~i~~~~-~~~~---~~~~~~~~  292 (467)
T d2v1pa1         220 VVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKY-ADMLAMSAKKDAMVP--MGGLLCMKD-DSFF---DVYTECRT  292 (467)
T ss_dssp             EEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGG-CSEEEEESSSTTCCS--SCEEEEECS-GGGH---HHHHHHHH
T ss_pred             EEEechhhhccccccccccccccCCcccccchhhccc-CCEEEecCCCCCCCC--CceeEEecc-hhhh---hHHHhhcc
Confidence            99999986421          1111111100 01111 125555788875443  346666543 2222   12222222


Q ss_pred             hc-----c-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEec----Cc
Q 014631          287 YL-----N-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKL----NL  356 (421)
Q Consensus       287 ~~-----~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~----~~  356 (421)
                      ..     . ...+.+.....+....+....   ..+..++..++.+++.+.|.+. ++. + .+..+....+..    +.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~-v-~~~~~~~~~~~~~~~~~~  366 (467)
T d2v1pa1         293 LCVVQEGFPTYGGLEGGAMERLAVGLYDGM---NLDWLAYRIAQVQYLVDGLEEI-GVV-C-QQAGGHAAFVDAGKLLPH  366 (467)
T ss_dssp             HHHHTTSSCCCCCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHT-TCC-E-EEECSSCEEEEHHHHSTT
T ss_pred             cccccccCcchhhhHHHHHHHHHHHhHHhh---hHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCccceeecchhhcCC
Confidence            11     1 112233333333333333211   1233444456777788888875 443 2 122222222211    11


Q ss_pred             ccccCCCChHHHHHHHHhhcCeeEEeCCC-------------CCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631          357 SLLEGISDDMEFALQLAKEESVIVLPGMA-------------VGMKNWLRITFA---IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------------~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~  417 (421)
                      ..... .........++.+.||.......             +.....+|++++   .++|+++.+++.|+++.++.
T Consensus       367 ~~~~~-~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~~~~  442 (467)
T d2v1pa1         367 IPADQ-FPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA  442 (467)
T ss_dssp             SCGGG-CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred             cchhh-hhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            10000 12345566777888985532211             112467999975   48999999999999998654

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.71  E-value=1.5e-16  Score=146.84  Aligned_cols=334  Identities=13%  Similarity=0.056  Sum_probs=185.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC----CCCCC------CCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC----YSPSV------GILPARRAIADYLNSELPCKLSPDDVYL  114 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~----y~~~~------g~~~l~~~ia~~l~~~~~~~~~~~~i~~  114 (421)
                      +.+||+-| |+     +.|++|.++|.+.+.+.....    +-..+      -+.+.|+.+++++    +.+ ++.+|++
T Consensus         3 ~~~~F~pG-P~-----~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~----~~~-~~~~i~~   71 (361)
T d2c0ra1           3 RAYNFNAG-PA-----ALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALL----GNP-TGYKVLF   71 (361)
T ss_dssp             CCEECCSS-SC-----CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHT----TCC-SSEEEEE
T ss_pred             CCcccCCC-Cc-----CCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHh----CCC-CCCEEEE
Confidence            45688765 33     578999999998764411000    00111      1344555555554    422 3447777


Q ss_pred             cCCH-HHHHHHHHHHhcCCCCeEEEcCCCCc--chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631          115 TAGC-KQAIQVILTVLARPGANILLPKPGFP--LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP  191 (421)
Q Consensus       115 ~~g~-~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p  191 (421)
                      ++|+ +.++..+...+..+|+++++......  .+...++..|..+..+..+....  ++++++++.+..++. .   ..
T Consensus        72 ~~gs~t~~~ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~---~v  145 (361)
T d2c0ra1          72 IQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNY--MTLPKLQEIQLQDNA-A---YL  145 (361)
T ss_dssp             ESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTT--CSCCCGGGCCCCTTE-E---EE
T ss_pred             ECCCchHHHHHHHhccccCCCceEEEeechhhhhhhhhhhhcCceeeeeccccccc--cchhhhhhhcccCcc-e---EE
Confidence            7665 55566667777888888877654443  24567778898888877654433  677777776655442 2   23


Q ss_pred             CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631          192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP  271 (421)
Q Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  271 (421)
                      +|.||...+   +.++.++|+++|+++++|.+++.    |....++..++     +.+.|.+|.++.+|...+++.-..-
T Consensus       146 ~~~tg~~~~---~~~i~~~~~~~~al~~vDavss~----g~~~id~~~~d-----i~~~s~~k~~~~~~~~~~~~~~~~~  213 (361)
T d2c0ra1         146 HLTSNETIE---GAQFKAFPDTGSVPLIGDMSSDI----LSRPFDLNQFG-----LVYAGAQKNLGPSGVTVVIVREDLV  213 (361)
T ss_dssp             EEESEETTT---TEECSSCCCCTTSCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCSSCEEEEEEGGGS
T ss_pred             EEeccccee---cceEEEeeccCCceEEEEeeccc----cccccccccce-----eEEEecccccccccCcEEEEEhHHh
Confidence            567888755   55677889999999999999987    44444554443     5566789998877743333322110


Q ss_pred             C----cchhHHHHHHHHhhhcccccCCchHHHHHHHHHhh-ccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc-ccCCCC
Q 014631          272 S----GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFK-NTKEDFFSKIVDILRDTADICYDRIKEIPCIT-CPRKPE  345 (421)
Q Consensus       272 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~  345 (421)
                      .    .......+.......... ..+++.....+...+. ...........++.+..+..+........... ....++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (361)
T d2c0ra1         214 AESPKHLPTMLRYDTYVKNNSLY-NTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVD  292 (361)
T ss_dssp             SSCCTTSCGGGCHHHHHHTTTCS-SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGG
T ss_pred             hhCcccccccccccccccccccc-ccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChh
Confidence            0    000000111111111111 1222222222222111 11123334444455555555555554431211 111121


Q ss_pred             --ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          346 --GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       346 --~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                        ......+.++...     +..++. ..|+++||.+..|...-  +.+||++.  ++.||++++++.|++..++
T Consensus       293 ~rS~~~~~~~~~~~~-----~~~~~~-~~L~~~GI~~~~G~~~~--g~~RIs~~~~~~~edv~~Lv~~l~~~~~~  359 (361)
T d2c0ra1         293 SRSDMNITFRLASEE-----LEKEFV-KASEQEGFVGLKGHRSV--GGLRASIYNAVPYESCEALVQFMEHFKRS  359 (361)
T ss_dssp             GBCSSEEEEECSCHH-----HHHHHH-HHHHHTTEESCBCCTTT--CSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             hccceEEEEECCCcc-----cHHHHH-HHHHHCCCEEecCCCcC--CeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence              1123444454321     234444 56688999999885432  35999987  6999999999999987654

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=7.6e-16  Score=141.90  Aligned_cols=336  Identities=13%  Similarity=-0.010  Sum_probs=188.1

Q ss_pred             eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC----CCC------CCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS----PSV------GILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~----~~~------g~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      ++||+-|- .     ..|++|++++.+.+.+......+    ...      -+.+.|+.++++++.     -++..|+++
T Consensus         2 ~~nF~pGP-~-----~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~-----~~~~~v~~~   70 (360)
T d1bjna_           2 IFNFSSGP-A-----MLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNV-----PSNYKVLFC   70 (360)
T ss_dssp             CEECCSSS-C-----CCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTC-----CTTEEEEEE
T ss_pred             eEEeCCCC-c-----CCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCC-----CCCCEEEEE
Confidence            57887663 3     57899999999987542111110    111      145677777777741     234478888


Q ss_pred             CCHHHHHHHHH-HHhcCCCCeEEEcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631          116 AGCKQAIQVIL-TVLARPGANILLPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG  192 (421)
Q Consensus       116 ~g~~~al~~~~-~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~  192 (421)
                      +|++++.+.+. ..+..+++.+++....+.+  +...++..|...+......+.  ..+.+.+++.+..+++.+.++..+
T Consensus        71 ~gs~t~~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~~~~  148 (360)
T d1bjna_          71 HGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVD--GLRAVKPMREWQLSDNAAYMHYCP  148 (360)
T ss_dssp             SSHHHHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEET--TEEEECCGGGCCCCSSCSCEEECS
T ss_pred             CCchHHHHhhhhhcccccccccceecccchhhhhHHHHhhcCccceeeccccCC--CcchhhhhhhhccCCceeEEEecc
Confidence            77766555544 4556777888887666654  345556666655555433322  245666667777788888888888


Q ss_pred             CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631          193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS  272 (421)
Q Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  272 (421)
                      |.||+..+...   +  .++.+++++++|.+.+..    ........++     +.+.|.+|.++.++. .|.++.....
T Consensus       149 ~~t~~~~~~~~---i--~~~~~~~~v~vDa~~~~~----~~~vd~~~~d-----v~~~ss~k~~~~~~~-~~~~~~~~~~  213 (360)
T d1bjna_         149 NETIDGIAIDE---T--PDFGADVVVAADFSSTIL----SRPIDVSRYG-----VIYAGAQKNIGPAGL-TIVIVREDLL  213 (360)
T ss_dssp             EETTTTEECCC---C--CCCCTTCCEEEECTTTTT----SSCCCGGGCS-----EEEEETTTTTSSTTC-EEEEEEGGGC
T ss_pred             cccccCccccc---e--ecccccceeeeeeecccc----ceeeeeccce-----eEEEEcccccccCCC-ceeEeeehhh
Confidence            88988755432   2  346778999999888763    2222333332     677788999776654 3444332211


Q ss_pred             cch-----hHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-
Q 014631          273 GIL-----QELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-  346 (421)
Q Consensus       273 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-  346 (421)
                      ...     ..................+......+....+........+...++.++....+...+...........+.. 
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  293 (360)
T d1bjna_         214 GKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNR  293 (360)
T ss_dssp             SCCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGB
T ss_pred             hhccccCCcchhhHHHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccc
Confidence            000     00001111111111222222222222222222222344455555566666666666555423221111111 


Q ss_pred             -eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631          347 -SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       347 -~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~  417 (421)
                       .....+.++...     +..++.. +++++||.+..|+..  -+.+|+|+.  ++.||++++++.|+++.+++
T Consensus       294 s~~v~~f~~~~~~-----~~~~~~~-~l~~~Gi~~~~G~~~--~g~~Ris~~~~~t~edV~~li~~l~e~~~~~  359 (360)
T d1bjna_         294 SRMNVPFQLADSA-----LDKLFLE-ESFAAGLHALKGHRV--VGGMRASIYNAMPLEGVKALTDFMVEFERRH  359 (360)
T ss_dssp             CSSEEEEEESSGG-----GHHHHHH-HHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEcCCcc-----cHHHHHH-HHHHCCCEeecCCCc--cCeEEEEecCCCCHHHHHHHHHHHHHHHHHc
Confidence             123334555321     3455554 568889999887532  135999997  78999999999999987654

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.60  E-value=3e-14  Score=131.09  Aligned_cols=330  Identities=15%  Similarity=0.051  Sum_probs=175.2

Q ss_pred             CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC----CC------CCCHHHHHHHHHHHhhhCCCCCCC-CcEE
Q 014631           45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS----PS------VGILPARRAIADYLNSELPCKLSP-DDVY  113 (421)
Q Consensus        45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~----~~------~g~~~l~~~ia~~l~~~~~~~~~~-~~i~  113 (421)
                      .++||+-|- +     +.|++|.+++.+.+.+.....-+    ..      .-+.+.|+.++++++      +++ ..|+
T Consensus         3 ~~~nF~pGP-~-----~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~------~~~~~~i~   70 (360)
T d1w23a_           3 QVFNFNAGP-S-----ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ------IPNDYQIL   70 (360)
T ss_dssp             CCEECCSSS-C-----CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEE
T ss_pred             ceeEeCCCC-c-----CCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhC------CCCCCEEE
Confidence            467788773 3     57899999999876442110000    00      124567888888874      333 4688


Q ss_pred             EcCCHHHHHHHHHHH-hcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631          114 LTAGCKQAIQVILTV-LARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN  190 (421)
Q Consensus       114 ~~~g~~~al~~~~~~-l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~  190 (421)
                      +++|++++...+... +..+++.+++....+.+.  ...+...+...+.........  ..++.++.......    ++.
T Consensus        71 ~~~gt~~~~~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~  144 (360)
T d1w23a_          71 FLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSY--QSIPDFSEFQLNEN----DAY  144 (360)
T ss_dssp             EESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTS--CSCCCGGGCCCCTT----EEE
T ss_pred             EeCCcHHHHHHHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccccccc--cchhhhhhcccccc----cce
Confidence            888887777765554 456778888877665543  344455565555444322211  23444444333222    223


Q ss_pred             CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631          191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD  270 (421)
Q Consensus       191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  270 (421)
                      ..|.||...   ++++|.++|+++|+++|+|.+++.    |....++..++     +.+.+++|-++.+|. .|+++...
T Consensus       145 ~~~~tg~~~---~~~~i~~~~~~~g~l~ivDavqs~----g~~~id~~~~~-----vd~~~~~~~k~~~~~-~~~~~~~~  211 (360)
T d1w23a_         145 LHITSNNTI---YGTQYQNFPEINHAPLIADMSSDI----LSRPLKVNQFG-----MIYAGAQKNLGPSGV-TVVIVKKD  211 (360)
T ss_dssp             EEEESEETT---TTEECSSCCCCCSSCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTSCTTC-EEEEEEHH
T ss_pred             eEecCCccc---cceeeeeccccceeeEEeeccccc----ccccccccccc-----ceEEeeccccccCCc-ceeeEech
Confidence            356678884   467788999999999999999997    44444554443     445566777655553 34444321


Q ss_pred             C-------CcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHHhhcCCCccc-c
Q 014631          271 P-------SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKN-TKEDFFSKIVDILRDTADICYDRIKEIPCITC-P  341 (421)
Q Consensus       271 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-~  341 (421)
                      .       ....  ........... ....+......+....+.. ..........++.+.................. .
T Consensus       212 ~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (360)
T d1w23a_         212 LLNTKVEQVPTM--LQYATHIKSDS-LYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGH  288 (360)
T ss_dssp             HHCSCCTTCCGG--GCHHHHHHTTT-CSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEES
T ss_pred             hhhcccccCCcc--hhhhhhhhhhh-hcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccC
Confidence            0       0000  00111111111 1112222222222211111 11122233333333333344444333222221 1


Q ss_pred             CCCCc-e-eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631          342 RKPEG-S-MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR  416 (421)
Q Consensus       342 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~  416 (421)
                      ..++. + ....+.++...     ++.++.. .+.++||.+..|+...  +.+|+|+.  ++.|+++++++.|.++.+.
T Consensus       289 ~~~~~rS~~vvsf~i~~~~-----~~~~~~~-~l~~~GI~~~~G~~~~--ggiRiS~~~~~t~e~V~~Li~~~~~~~~~  359 (360)
T d1w23a_         289 AEKGSRSLMNVTFNLRNEE-----LNQQFLA-KAKEQGFVGLNGHRSV--GGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             SCGGGBCSSEEEEECSSHH-----HHHHHHH-HHHHTTEESCBCCTTT--CSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CChhhcceeEEEEEcCCCc-----cHHHHHH-HHHHCCCeeeeCCCcc--CcEEEEeeCCCCHHHHHHHHHHHHHHHhc
Confidence            12211 1 13444454321     2445554 5678899998876432  46999986  5999999999999988653

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.40  E-value=1e-10  Score=107.77  Aligned_cols=300  Identities=17%  Similarity=0.148  Sum_probs=175.3

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCcchHH----HHhhcCceeEee
Q 014631           86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFPLYEA----NARHTRLEIRHF  160 (421)
Q Consensus        86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~  160 (421)
                      +|.-++--.+..++.+.-|  .+..+.-.-.|++.....+..+.. ...+++++....|+.+..    .+...|.+++.+
T Consensus       104 QG~Lq~l~e~q~~l~eltG--md~~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v  181 (437)
T d1wyua1         104 QGVLQATFEYQTMIAELAG--LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL  181 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhhC--CCccccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEee
Confidence            4444444444444444333  333444555677776666654432 245789999988876533    345679999988


Q ss_pred             eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631          161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF  240 (421)
Q Consensus       161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  240 (421)
                      +.+..   +.+.++    +++++.++++.+|+. .|.+   ++++++.+++++.|.+++.|..-..+  .+-  .+...+
T Consensus       182 ~~~~~---~~~~~~----~~~~~Aavmi~~Pnt-~G~~---ed~~~i~~~~h~~G~l~~~~ad~~al--~~l--~~Pg~~  246 (437)
T d1wyua1         182 PLEGG---RTPLPE----VGEEVGAVVVQNPNF-LGAL---EDLGPFAEAAHGAGALFVAVADPLSL--GVL--KPPGAY  246 (437)
T ss_dssp             CCBTT---BCCCCC----CCTTEEEEEEESSCT-TSBC---CCHHHHHHHHHHTTCEEEEECCTTGG--GTB--CCHHHH
T ss_pred             ecccc---cchhhh----hccceeEEEEccccc-cccc---cchHHHHHHhhhccceEEeeechhhh--hcc--cccccc
Confidence            76432   223222    467888999999975 7888   67899999999999988877443221  121  122333


Q ss_pred             CCCCCEEEEcccccccCCC----CceEEEEEeeCCCcch------h-------H-------HHHHHHHhhhccc--ccCC
Q 014631          241 GSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGIL------Q-------E-------LRIVDSIKGYLNI--SSGP  294 (421)
Q Consensus       241 ~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~------~-------~-------~~~~~~~~~~~~~--~~~~  294 (421)
                      +.+   |++++ +|.||.|    |.-.|++.+++.-...      .       +       ..-.+.+++.+..  .++.
T Consensus       247 GaD---i~~g~-~q~fg~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~  322 (437)
T d1wyua1         247 GAD---IAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTN  322 (437)
T ss_dssp             TCS---EEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSC
T ss_pred             ccc---eEeec-cceeccccCCCcCccccccccchhhccccccccccccccCCcccceeecccccccccccccccchhhH
Confidence            433   55665 5554432    3446888775320000      0       0       0000111111111  1122


Q ss_pred             chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHh
Q 014631          295 ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAK  374 (421)
Q Consensus       295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  374 (421)
                      ..+....+..++.....+++++..++...+..++.+.|.+++|+. +..+. .+|.-+.+...     .+..++..+| .
T Consensus       323 q~l~a~~a~~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~~~g~~-~~~~~-~~f~ef~v~~~-----~~~~~i~k~L-~  394 (437)
T d1wyua1         323 AQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVR-PFTPK-PFFNEFALALP-----KDPEAVRRAL-A  394 (437)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCE-ECSCS-SBCSEEEEECS-----SCHHHHHHHH-H
T ss_pred             HHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHHHHHHhhhcCCee-ccCCC-CeeeEEEEECC-----CCHHHHHHHH-H
Confidence            333333344445444568899999999999999999999988887 32333 33332222211     1456666665 5


Q ss_pred             hcCeeEEeC-CCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631          375 EESVIVLPG-MAVGMKNWLRITFA--IEPSALEEGLGRIKAFC  414 (421)
Q Consensus       375 ~~gv~v~~g-~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~  414 (421)
                      ++|+....- ..+..++.+.+++.  .++++|++++++|++++
T Consensus       395 d~G~~~~~~~~~~~~~~~lli~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         395 ERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             HTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             hCCCCCCcccccCCCCCeEEEecCCCCCHHHHHHHHHHHHHhC
Confidence            678853211 11223578999997  78999999999998864

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.24  E-value=5.2e-09  Score=97.49  Aligned_cols=333  Identities=15%  Similarity=0.116  Sum_probs=190.8

Q ss_pred             CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631           43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP---SVG----ILPARRAIADYLNSELPCKLSPDDVYLT  115 (421)
Q Consensus        43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~  115 (421)
                      +...+-+|.+. .     ..+|.+.+.+.+..  -.++-|.|   ++|    +-++...|+++.      +.+-.+.-..
T Consensus        64 ~~~~~~lG~~~-~-----hy~P~v~~~~~~~~--TaYTPYQPaEiSQG~LQalfEfQtmi~eLT------GMdvaNaS~y  129 (471)
T d1wyub1          64 DTTFYPLGSCT-M-----KYNPKLHEEAARLF--ADLHPYQDPRTAQGALRLMWELGEYLKALT------GMDAITLEPA  129 (471)
T ss_dssp             TTSCCCBTTTC-C-----CCCCHHHHHHHHTT--SSCCTTSCGGGCHHHHHHHHHHHHHHHHHH------TCSEEECCCS
T ss_pred             cccccCCcccc-C-----ccCcchhhhHHHHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHh------CCCccccccc
Confidence            34555555442 1     23355666665422  12345555   334    235555666665      3444455556


Q ss_pred             CCHHHHHHHHHHHh---cCCC----CeEEEcCCCCcc-hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631          116 AGCKQAIQVILTVL---ARPG----ANILLPKPGFPL-YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV  187 (421)
Q Consensus       116 ~g~~~al~~~~~~l---~~~g----d~Vl~~~p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~  187 (421)
                      .|+|..-..+..+.   .+.+    ..+++..+.+.. ........+..++.++..  .....+.+.+.....+++.+++
T Consensus       130 DGatA~aeA~~ma~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~v~  207 (471)
T d1wyub1         130 AGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALM  207 (471)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhhhcccccccccccCCcccccceeeeeecccceeeccccc--ccccccchhhhhhhhcccccee
Confidence            67766555544332   1122    244455555544 445555666677766643  3345788888888888888899


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC----CCceE
Q 014631          188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV----PGWRL  263 (421)
Q Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~  263 (421)
                      +.+|++..+..   +..+.+.+++++.+..+++|.+.-.... +-.  +......+   +++...++.||.    +|.-+
T Consensus       208 v~~p~~~g~~e---~~~~~~~~~~h~~g~~~~~~~~~~~~~~-~l~--~p~~~g~d---iv~vg~~q~~G~P~~~GGP~~  278 (471)
T d1wyub1         208 LTNPNTLGLFE---RRILEISRLCKEAGVQLYYDGANLNAIM-GWA--RPGDMGFD---VVHLNLHKTFTVPHGGGGPGS  278 (471)
T ss_dssp             ECSSCTTSCCC---TTHHHHHHHHHHHTCEEEEEGGGGGGTT-TTC--CHHHHTCS---EEECCTTTTTCCCCTTSCCCC
T ss_pred             eccCCCccccc---chhhhhHHHHHhccccccccccchhhhh-hcc--ccCccccc---ccccccccccccccccccccc
Confidence            99998866555   5678888999999988887755433221 111  11111221   333445555543    34457


Q ss_pred             EEEEeeCCCcchhHHHHHHHHh-------------------hhcccccCCc-hHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631          264 GWLVTSDPSGILQELRIVDSIK-------------------GYLNISSGPA-TFVQGAVPQIFKNTKEDFFSKIVDILRD  323 (421)
Q Consensus       264 G~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~  323 (421)
                      |++.+.+        ++...+-                   ..+....+.+ .+...++..++.....+++.+..+...+
T Consensus       279 G~~a~~~--------~~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~  350 (471)
T d1wyub1         279 GPVGVKA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVL  350 (471)
T ss_dssp             CCEEECG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeehh--------hhhccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence            8888753        2222221                   0001111222 3333344445554557899999999999


Q ss_pred             HHHHHHHHhhcCCCccccCCCCceeE--EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEEec--C
Q 014631          324 TADICYDRIKEIPCITCPRKPEGSMF--VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNWLRITFA--I  398 (421)
Q Consensus       324 ~~~~~~~~l~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~~~--~  398 (421)
                      +..++.++|+. +|+.+. . .+.+|  +.++++..     .+..++..+|+ ++|+.-....+.. .++.+-||+.  +
T Consensus       351 ~A~Yla~~L~~-~G~~~~-~-~~~ff~EFvv~~~~~-----~~~~~i~k~L~-~~G~~~~~~~~p~~~~~~llv~vTE~~  421 (471)
T d1wyub1         351 NARYLKELLKE-KGYRVP-Y-DGPSMHEFVAQPPEG-----FRALDLAKGLL-ELGFHPPTVYFPLIVKEALMVEPTETE  421 (471)
T ss_dssp             HHHHHHHHHHH-TTCBCS-S-CSSCCSCEEEBCSTT-----CCHHHHHHHHH-HTTCCCCEESCSTTSTTCEEECCCTTS
T ss_pred             HHHHHHHHHhh-cCceec-c-CcceeeEEeecCCCC-----CCHHHHHHHHH-HcCCCCCcccCcCCCCCeEEEecCCCC
Confidence            99999999976 588832 2 23333  22333321     13556666665 5688542222222 2567889987  8


Q ss_pred             CHHHHHHHHHHHHHHHHHh
Q 014631          399 EPSALEEGLGRIKAFCQRH  417 (421)
Q Consensus       399 ~~e~l~~~~~~l~~~~~~~  417 (421)
                      +++|||+++++|++++++.
T Consensus       422 tkedID~lv~aL~~i~~e~  440 (471)
T d1wyub1         422 AKETLEAFAEAMGALLKKP  440 (471)
T ss_dssp             CHHHHHHHHHHHHHHHTSC
T ss_pred             CHHHHHHHHHHHHHHHHhh
Confidence            9999999999999998764

>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Bacterial cell division inhibitor SulA
domain: Hypothetical protein PA3008
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.35  E-value=1.4  Score=31.14  Aligned_cols=104  Identities=13%  Similarity=0.054  Sum_probs=66.3

Q ss_pred             cEEEcCCHHHHHHHHHHHh---cCC--CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631          111 DVYLTAGCKQAIQVILTVL---ARP--GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA  185 (421)
Q Consensus       111 ~i~~~~g~~~al~~~~~~l---~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~  185 (421)
                      ++.....+.+.+.++...+   .+.  +.-|+..+|-|.+|.......|.....+-+....+-.-....+|++++.++..
T Consensus         6 el~~~~~~~~~l~LL~P~L~~l~~~~~~rwi~wI~Pp~~p~a~~L~~~Gi~~~rll~v~~~~~~d~lwa~EqaL~sg~~~   85 (119)
T d1ofux_           6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH   85 (119)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred             eecccCCcHHHHHHHHHHHHHHHhcCCCcEEEEEcCCCccCHHHHHHcCCCCCeEEEEeCCChHHHHHHHHHHHhcCCcc
Confidence            4555566666666666544   333  34588888888999999999998644333222222111355567788777777


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631          186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI  219 (421)
Q Consensus       186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  219 (421)
                      .++..+.+     ++...++++--.|++.+...+
T Consensus        86 aVl~w~~~-----l~~~~~RRLqlAA~~g~t~~~  114 (119)
T d1ofux_          86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQSL  114 (119)
T ss_dssp             EEEECCSS-----CCHHHHHHHHHHHHHHTCEEE
T ss_pred             EEEEcCCC-----CChHHHHHHHHHHHhcCCEEE
Confidence            77776643     556778888888887776544