Citrus Sinensis ID: 014741


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
cccHHHHHHHHHHHHHHHccEEEcccccccccccccccccccccHHHHHHHccccEEEEccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccEEEEEccccccccccccHHHccHHcccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHccccccccEEEEEEcHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccHHHHccccccccHHHHHHHHHHHccccccEEEEEEEEEEccccccHHHHHHccccEEEcccccccccccccccccccccEEEEEEccccEEEEcccccHHHHHHHccEEEccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHccHHHHHHHHHHHcEEHHcccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccEEEEccccHHHccccccHHHHHHEEHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHHcccccHHHcccccccccccccEEEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHcccccccHHHHHHHHHHccccccEEEEEEEccEcccHHHHHHHHHHccccccHcHcccHHHHHHccccHHHHHHHHHHEEccccEEEEccccccHHHHHHHHHHHccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccEccccccHcccccc
MNQQRVAICNAVVLARLLNATLVVPKFMyssvwrdvsqfsdiyQEEHfinyltpdiRMVKELPNklqsldleaigsvvtdvdipkeskpsfylkniipillRNGVVHLLGfgnrlafdpipfqLQRLRCRcnfhalqfaPKIQETGALLLRRLRkheghsgpldhylvgpyadsimkekrgqsaKASRYLAIHLRFEIDMVAHSLcefgggeeeRQELEKYREIHFPALAHlkkttklpspaeirseglcpltpEEAVLMLAALGFNRKTHVFVAGaqiyggtrrlgalnslypylvtkenllsatelepfknfssQLAALDFIGCTaanafamtdsgsqlSSLVSGYriyygggkmptirpnKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKhiqsrskgrsvyryprckecmcptd
MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSvvtdvdipkeskpsfYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEghsgpldhylvGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALahlkkttklpspaEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAmtdsgsqlSSLVSGYRIYYGggkmptirpnKRRLAAIFVKNSTIEWKVFEQRVRKavrqtkhiqsrskgrsvyryprckecmcptd
MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCefgggeeerqelekyreIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
*****VAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSI**********ASRYLAIHLRFEIDMVAHSLCEFGGG******LEKYREIHFPALAHLKK************EGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVR*************VYRYPRCKE******
****RVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKH************GPY**************ASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKL********EGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFE************************YPRCKECMCP**
MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMK*********SRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVR*****************VYRYPRCKECMCPTD
MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPT*
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MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query419 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.878 0.709 0.314 6e-49
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  195 bits (495), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 218/423 (51%), Gaps = 55/423 (13%)

Query: 1   MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVK 60
           +NQQR AICNAV+ AR++NATLV+P+   +S W D S F  IY  EHFI  L  D+++V 
Sbjct: 100 LNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVG 159

Query: 61  ELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPI 120
           ++P+  ++   + I +    +  P+++   +YL   +  +  +  ++L  F +RLA +  
Sbjct: 160 KIPDVHKNGKTKKIKAF--QIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEID 217

Query: 121 PFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKR 180
             + QRLRCR N+HAL+F P I +    ++ +LR  +GH                     
Sbjct: 218 NPEYQRLRCRVNYHALRFKPHIMKLSESIVDKLRS-QGH--------------------- 255

Query: 181 GQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPS 240
                   +++IHLRFE+DM+A + C      EE++ L KYR+ +F          K   
Sbjct: 256 --------FMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKENF--------ADKRLI 299

Query: 241 PAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKE 300
             E R+ G CPLTPEE  L+L A+ F+  T +++A  +++GG + +    +L+P L   +
Sbjct: 300 YNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRL---D 356

Query: 301 NLLSATELEPFKNFSSQL--AALDFIGCTAANAFAMT-DSGSQLSSLVSGYRIYYGGGKM 357
           N  S    E     S  L  +A+D++ C  ++ F  T D  S  ++ + G+R+YYG    
Sbjct: 357 NHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRT- 415

Query: 358 PTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTK----HIQSRSKGRSVYRYPRCKE 413
            TIRP+++ LA IF+     +   FE+ VR+ + +T     H +   +      +P   E
Sbjct: 416 -TIRPDRKALAPIFIAREKGKRAGFEEAVRRVMLKTNFGGPHKRVSPESFYTNSWP---E 471

Query: 414 CMC 416
           C C
Sbjct: 472 CFC 474





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
224113753465 predicted protein [Populus trichocarpa] 1.0 0.901 0.830 0.0
224117960467 predicted protein [Populus trichocarpa] 1.0 0.897 0.830 0.0
297741763 717 unnamed protein product [Vitis vinifera] 1.0 0.584 0.806 0.0
359494826 617 PREDICTED: DUF246 domain-containing prot 1.0 0.679 0.806 0.0
356520091 583 PREDICTED: DUF246 domain-containing prot 1.0 0.718 0.809 0.0
356564474 579 PREDICTED: DUF246 domain-containing prot 1.0 0.723 0.799 0.0
449513539 672 PREDICTED: DUF246 domain-containing prot 0.997 0.622 0.791 0.0
449455459 672 PREDICTED: DUF246 domain-containing prot 0.997 0.622 0.789 0.0
255554775 642 conserved hypothetical protein [Ricinus 1.0 0.652 0.817 0.0
357480375 620 hypothetical protein MTR_4g132590 [Medic 0.990 0.669 0.797 0.0
>gi|224113753|ref|XP_002316562.1| predicted protein [Populus trichocarpa] gi|222859627|gb|EEE97174.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/419 (83%), Positives = 383/419 (91%)

Query: 1   MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVK 60
           MNQQRVA+CNAVV+ARLLN+TLV+P+FMYSSVWRDVSQFSDIYQEEHFINYLTPDIR+VK
Sbjct: 47  MNQQRVAVCNAVVIARLLNSTLVIPRFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRIVK 106

Query: 61  ELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPI 120
           ELP +LQSLDLEAIGSVVTD DI KESKPSFYLKNI+PILL+N VVH +GFGNRLAFDPI
Sbjct: 107 ELPKELQSLDLEAIGSVVTDADIGKESKPSFYLKNILPILLKNRVVHFVGFGNRLAFDPI 166

Query: 121 PFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKR 180
           PFQLQ LRCRCNFHALQF+PKIQET ALL++RLRK+  HSGPLDHYL+GPYA+  ++EK 
Sbjct: 167 PFQLQTLRCRCNFHALQFSPKIQETVALLIQRLRKNAAHSGPLDHYLIGPYAEKNLQEKV 226

Query: 181 GQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPS 240
           G + KASRYLA+HLRFEIDMVAHSLCE+GGGEEER+ELE YREIHFPAL  LKKT KLPS
Sbjct: 227 GHAVKASRYLALHLRFEIDMVAHSLCEYGGGEEERKELEAYREIHFPALTLLKKTNKLPS 286

Query: 241 PAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKE 300
           PA +R EGLCPLTPEEAVLMLAALGF+RKTH+F+AGA IYGG  RL AL SLYP LVTKE
Sbjct: 287 PAMLREEGLCPLTPEEAVLMLAALGFSRKTHIFIAGANIYGGRSRLTALTSLYPNLVTKE 346

Query: 301 NLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTI 360
            LLSATEL+PF NFSSQLAALDFI CTA++AFAMTDSGSQLSSLVSG+RIYYGGGKMPTI
Sbjct: 347 KLLSATELKPFMNFSSQLAALDFIACTASDAFAMTDSGSQLSSLVSGFRIYYGGGKMPTI 406

Query: 361 RPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD 419
           RPNKRRLA IF KN++IEWK+FEQRVRKAVRQTKH+  R K RSVYRYPRCKECMC T+
Sbjct: 407 RPNKRRLADIFRKNNSIEWKIFEQRVRKAVRQTKHVLQRPKARSVYRYPRCKECMCLTE 465




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117960|ref|XP_002331523.1| predicted protein [Populus trichocarpa] gi|222873747|gb|EEF10878.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297741763|emb|CBI32992.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494826|ref|XP_002271717.2| PREDICTED: DUF246 domain-containing protein At1g04910-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520091|ref|XP_003528699.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|356564474|ref|XP_003550479.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|449513539|ref|XP_004164352.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449455459|ref|XP_004145470.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255554775|ref|XP_002518425.1| conserved hypothetical protein [Ricinus communis] gi|223542270|gb|EEF43812.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|357480375|ref|XP_003610473.1| hypothetical protein MTR_4g132590 [Medicago truncatula] gi|357497961|ref|XP_003619269.1| DUF246 domain-containing protein [Medicago truncatula] gi|355494284|gb|AES75487.1| DUF246 domain-containing protein [Medicago truncatula] gi|355511528|gb|AES92670.1| hypothetical protein MTR_4g132590 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
TAIR|locus:2027129652 AT1G62330 [Arabidopsis thalian 1.0 0.642 0.726 3e-165
TAIR|locus:2008935590 AT1G11990 [Arabidopsis thalian 0.570 0.405 0.698 1.2e-149
TAIR|locus:2029984611 AT1G29200 [Arabidopsis thalian 0.983 0.674 0.560 7e-125
TAIR|locus:2049527567 AT2G01480 [Arabidopsis thalian 0.568 0.419 0.353 3.7e-68
TAIR|locus:2121793551 RHS17 "root hair specific 17" 0.460 0.350 0.406 1.1e-66
TAIR|locus:2006852562 AT1G14970 [Arabidopsis thalian 0.570 0.425 0.348 2.7e-65
TAIR|locus:2079281557 AT3G26370 [Arabidopsis thalian 0.384 0.289 0.386 1.3e-62
TAIR|locus:2130938549 AT4G16650 [Arabidopsis thalian 0.534 0.408 0.357 3.6e-62
TAIR|locus:2168297504 AT5G65470 [Arabidopsis thalian 0.959 0.797 0.345 7.9e-62
TAIR|locus:2014666568 AT1G35510 [Arabidopsis thalian 0.534 0.394 0.341 9.9e-62
TAIR|locus:2027129 AT1G62330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1608 (571.1 bits), Expect = 3.0e-165, P = 3.0e-165
 Identities = 305/420 (72%), Positives = 347/420 (82%)

Query:     1 MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVK 60
             +NQQRVA+CN VV+AR+LNATLV+PKFM+S VW D SQF DIYQ EHFI YL+PDIR+VK
Sbjct:   233 INQQRVAVCNIVVVARMLNATLVIPKFMFSDVWTDASQFGDIYQVEHFIKYLSPDIRIVK 292

Query:    61 ELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPI 120
             +LP +LQSLDLEAIGSVVTD+D+ KE+KP FY+K+I+P+LL+N VVH LGFGNRLAFDPI
Sbjct:   293 KLPKELQSLDLEAIGSVVTDIDVMKEAKPGFYMKHILPLLLKNRVVHFLGFGNRLAFDPI 352

Query:   121 PFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGP-YADSIMKEK 179
             PF+LQRLRCRCNFHAL F PKIQETGA+L+RRLR    H  P+D YLVGP +A  I+ +K
Sbjct:   353 PFELQRLRCRCNFHALNFVPKIQETGAILVRRLRDSGSHLAPVDPYLVGPKFASFILDKK 412

Query:   180 RGQSAKASRYLAIHLRFEIDMVAHSLCXXXXXXXXXXXXXXXXXIHFPALAHLKKTTKLP 239
              G   KAS+YLA+HLRFEIDMVAHSLC                  HFP LA+L KT K+P
Sbjct:   413 AGPLHKASKYLAVHLRFEIDMVAHSLCYFGGGDAEKAELDAYREKHFPTLANLTKTQKMP 472

Query:   240 SPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTK 299
             SP ++R+EGLCPL+PEEAVLMLA LGF+RKT VFVAGA IYGG +RL AL SLYP LVTK
Sbjct:   473 SPDDLRTEGLCPLSPEEAVLMLAGLGFSRKTRVFVAGANIYGGNKRLAALTSLYPNLVTK 532

Query:   300 ENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPT 359
             EN+LS TELEPFKNFSSQLA LDFI C A++AFAMTDSGSQLSSLVSGYRIYYG GKMPT
Sbjct:   533 ENVLSQTELEPFKNFSSQLAVLDFIACAASDAFAMTDSGSQLSSLVSGYRIYYGAGKMPT 592

Query:   360 IRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD 419
             IRPNKRR + I +KN+TIEWKVFEQRVRK VRQTKH+  R  GRSVYRYPRCKECMC  D
Sbjct:   593 IRPNKRRFSDILLKNNTIEWKVFEQRVRKTVRQTKHVLVRPTGRSVYRYPRCKECMCNED 652




GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0008150 "biological_process" evidence=ND
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2008935 AT1G11990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006852 AT1G14970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014666 AT1G35510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.XI.1485.1
hypothetical protein (462 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-133
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 1e-107
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 6e-05
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  383 bits (985), Expect = e-133
 Identities = 146/355 (41%), Positives = 194/355 (54%), Gaps = 76/355 (21%)

Query: 2   NQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKE 61
           NQQR  IC+AV +ARLLNATLV+P+   +SVW D S+F DIY  +HFI  L  D+R+VK+
Sbjct: 11  NQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKSLKDDVRVVKK 70

Query: 62  LPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIP 121
           LP +L S   E     +T   +P  S PS+YL+ ++P+L ++GV+ L  F +RLA D +P
Sbjct: 71  LPEELASKKPE-----ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLP 125

Query: 122 FQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRG 181
            ++QRLRCR NFHAL+F P+I+E G  L+ RLR+  G                       
Sbjct: 126 PEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGG----------------------- 162

Query: 182 QSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSP 241
                  +LA+HLRFE DM+A S C                                   
Sbjct: 163 ------PFLALHLRFEKDMLAFSGC----------------------------------- 181

Query: 242 AEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKEN 301
                 G CPLTPEE  L+L ALGF R T +++A  +IYGG RRL  L S++P L TKE 
Sbjct: 182 ------GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLYTKET 235

Query: 302 LLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGK 356
           L +A EL PF   SS+LAALD+I C  ++ F  T  G   +  V+G+R Y G  K
Sbjct: 236 LATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGG-NFAKAVAGHRRYLGHRK 289


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 419
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 83.14
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=1.8e-56  Score=441.41  Aligned_cols=304  Identities=39%  Similarity=0.598  Sum_probs=207.7

Q ss_pred             CcchhhHHHHHHHHHHHhcceEeeccccCCCcccCCCC-----CCCcCchHHHHHhccCCeEEeccCchhhhccchhhh-
Q 014741            1 MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQ-----FSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAI-   74 (419)
Q Consensus         1 LNQqR~~IcDaVaVARlLNATLViP~l~~~s~w~D~S~-----F~DIfD~dhFI~~L~~dVrIVk~LP~~~~~~~~~~~-   74 (419)
                      +|+||.++++||++|++||+|||||.|.....|++.++     |+|+||+++|+++++++|.+.+.+|..+........ 
T Consensus        10 fnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~~~~~   89 (351)
T PF10250_consen   10 FNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFRLQYC   89 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-EEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccchhhc
Confidence            49999999999999999999999999999999999998     999999999999999999999999877755322100 


Q ss_pred             -----------------------cccccccCCCC-CCChhHHHhhhhhhhhhc------ceEEEeccCCcccCCCCchhh
Q 014741           75 -----------------------GSVVTDVDIPK-ESKPSFYLKNIIPILLRN------GVVHLLGFGNRLAFDPIPFQL  124 (419)
Q Consensus        75 -----------------------~~~~~~~~~~~-~s~~~~Y~~~vlP~l~k~------~Vi~l~~~~~rLa~~~~p~~i  124 (419)
                                             ........... ++.+.+|+++++|.+.++      +|+.|.++..++..+..+.++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  169 (351)
T PF10250_consen   90 WSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYLDRDL  169 (351)
T ss_dssp             SS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GGGGGG
T ss_pred             ccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhcccCccc
Confidence                                   00011122233 788999999999999987      999999999999988889999


Q ss_pred             hhhhhhhcccccccchhHHHHHHHHHHHHhcccCCCCCCCcccCCCccchhhhhhhcccccCCceEEEeechhhhhhhhc
Q 014741          125 QRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHS  204 (419)
Q Consensus       125 QrLRCrvnf~ALrF~~~I~~lg~~LV~RLr~~~~~~~~~~~~~~gpf~~~~~~~~~~~~~~~~~ylAlHLRfE~DMlA~s  204 (419)
                      ||        +|+|.++|+++|+++|++++..                             +++|||+|||+|+||  ++
T Consensus       170 ~r--------~l~~~~~i~~~a~~~i~~~~~~-----------------------------~~~yiavHlR~~~D~--~~  210 (351)
T PF10250_consen  170 QR--------YLRFSPEIRELADKFIKRLLAG-----------------------------GGPYIAVHLRRGKDW--FS  210 (351)
T ss_dssp             GG--------G--B-HHHHHHHHHHHHHH---------------------------------SSEEEEEE--SHHH--HH
T ss_pred             eE--------EEecCHHHHHHHHHHHHHhhcc-----------------------------cCceEEEeecccCch--Hh
Confidence            88        9999999999999999999832                             258999999999999  89


Q ss_pred             cccCCCChhHHHHHHHHHHhhchhhhhcccCCCCCChHhhhcCCCCCCCHHHHHHHHHHhCCCCCcEEEEeeceecCccc
Q 014741          205 LCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTR  284 (419)
Q Consensus       205 gC~~g~~~~E~~eL~~~R~~~~~~~~~~~~~~~~~~~~~~R~~G~CPLtPeEvgl~L~alGf~~~T~IYlA~geiyGG~~  284 (419)
                      +|.+++   ++..|+.+|...          .+.+.+...+..|.||++|++++.+++++|+.+.|.||||++++|||.+
T Consensus       211 ~C~~~~---~~~~~~~~~~~~----------~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~  277 (351)
T PF10250_consen  211 ACEFKG---ERHLLASPRCWG----------KKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGER  277 (351)
T ss_dssp             HHCT-T-------TTTHHHH-----------GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS------
T ss_pred             hcccCC---chHHHHHhHhhc----------cccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccch
Confidence            999955   778888888541          1234577889999999999999999999999999999999999999999


Q ss_pred             ccchhHhhCCCccccccCCCccccccccccccccchhheeeeccCceeeecCCCCchhhhhhhhhccccCCCCcc
Q 014741          285 RLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPT  359 (419)
Q Consensus       285 ~L~pL~~~FPnl~tKe~L~s~~EL~pf~~~ss~laALDy~Vc~~SDvFv~t~~G~n~a~~v~GhR~y~G~~~~kT  359 (419)
                      .|.+|+++||++++|+++.+.+|+++|.+  .++|+||++||++||+||+|. ||+|+..|+++|.|.|..++||
T Consensus       278 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~vD~~i~~~s~~Figt~-~Stfs~~i~~~R~~~g~~~~~~  349 (351)
T PF10250_consen  278 RLDPLKNMFPNVVTKDDLLSHEELEPLND--DQLAMVDQEICSRSDVFIGTC-GSTFSSNIARERHYRGKPKRKS  349 (351)
T ss_dssp             -----HHHHHHHHGGGT--EE--S-------S--HHHHHHHHHHSSEEEE-T-T-HHHHHHHHHHHHSSSS---E
T ss_pred             hHHHHHHHhhhhEeccccCCHHHhhhccc--cchhHHHHHHHhcCCEEEecC-cchhHHHhhcccCcCCCCCCCC
Confidence            99999999999999999999999999986  899999999999999999999 6689999999999999887555



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.4 bits (122), Expect = 4e-07
 Identities = 47/315 (14%), Positives = 86/315 (27%), Gaps = 97/315 (30%)

Query: 10  NAVVLARLLNATL------VVPKFM-------YSSVW-------RDVSQFSDIYQEEH-- 47
           +AV     L  TL      +V KF+       Y  +        R  S  + +Y E+   
Sbjct: 59  DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 48  -------FINYLTPDIRMVKELPNKLQSLDLEA---------IG-SVVT-DVDIPKESKP 89
                  F  Y    ++   +L   L  L              G + V  DV        
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV-------- 170

Query: 90  SFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRL--RCRCNFHALQFA----PKIQ 143
                +       +  +  L   N  + + +   LQ+L  +   N+ +            
Sbjct: 171 ---CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 144 ETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKA----------SRYLAIH 193
            +    LRRL K + +   L   LV     ++   +  ++  A          +R+  + 
Sbjct: 228 HSIQAELRRLLKSKPYENCL---LV---LLNV---QNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 194 LRFEIDMVAH-SLCEFGGGEEERQELE---KYREIHFPALAHLKKTTKLPSPAEIRSEGL 249
                    H SL          +      KY +          +   LP      +   
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC---------RPQDLPREVLTTN--- 326

Query: 250 CPLTPEEAVLMLAAL 264
            P      + ++A  
Sbjct: 327 -PR----RLSIIAES 336


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query419
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.39
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 98.38
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 92.64
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 81.51
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.39  E-value=1.8e-12  Score=131.14  Aligned_cols=283  Identities=22%  Similarity=0.196  Sum_probs=156.3

Q ss_pred             cchhhHHHHHHHHHHHhcce----EeeccccCCCcccCC------CCCCCcCchHHHHHhccCCeEEeccCchhhhcc-c
Q 014741            2 NQQRVAICNAVVLARLLNAT----LVVPKFMYSSVWRDV------SQFSDIYQEEHFINYLTPDIRMVKELPNKLQSL-D   70 (419)
Q Consensus         2 NQqR~~IcDaVaVARlLNAT----LViP~l~~~s~w~D~------S~F~DIfD~dhFI~~L~~dVrIVk~LP~~~~~~-~   70 (419)
                      |-||...=.|.++|+.||.|    ||||-+..-.-|+-+      -.|++.||++.+    +..|+|+..  +++... .
T Consensus        36 n~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~~vpVI~m--eeFl~~~~  109 (408)
T 4ap5_A           36 NLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NKNIPVIEY--EQFIAESG  109 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HTTSCEEEH--HHHHHHSS
T ss_pred             cHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----HhhCCeeEH--HHHHHHhC
Confidence            67899999999999999999    999977544456543      259999999864    445566532  222100 0


Q ss_pred             hhhh-------------ccc----------c------cccCCCCCCChhHHHh-----------------hhhhhhhhc-
Q 014741           71 LEAI-------------GSV----------V------TDVDIPKESKPSFYLK-----------------NIIPILLRN-  103 (419)
Q Consensus        71 ~~~~-------------~~~----------~------~~~~~~~~s~~~~Y~~-----------------~vlP~l~k~-  103 (419)
                      +..+             ...          +      ...+.....++.|-..                 .+-|.+.+. 
T Consensus       110 ~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c~~~~~~~~~~~~~~~~~~  189 (408)
T 4ap5_A          110 GPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQGSASIVAPLLLRNT  189 (408)
T ss_dssp             SSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEEEEECSBGGGGHHHHHHCT
T ss_pred             CCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCceeEEEeecchhhhhhhhhcC
Confidence            0000             000          0      0000000011222111                 122333332 


Q ss_pred             --ceEEEeccCCcccCCCCchhhhhhhhhhcccccccchhHHHHHHHHHHHHhcccCCCCCCCcccCCCccchh------
Q 014741          104 --GVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSI------  175 (419)
Q Consensus       104 --~Vi~l~~~~~rLa~~~~p~~iQrLRCrvnf~ALrF~~~I~~lg~~LV~RLr~~~~~~~~~~~~~~gpf~~~~------  175 (419)
                        .-+-+..+...|+.-.-..+...+|     ..|+|++.|.+.|+..++..-..             ++...+      
T Consensus       190 ~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L~~-------------~~~~~h~r~~~d  251 (408)
T 4ap5_A          190 SARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHLNS-------------TDDADRIPFQED  251 (408)
T ss_dssp             TCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHHCC-------------CTTTTTCCCCSS
T ss_pred             ChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHhCc-------------ccceeecccchh
Confidence              2223333333443222223333322     47999999999999998876432             111111      


Q ss_pred             -hh-hhhcccccCCceEEEeechhhhhhhhccccCCCChhHHHHHHHHHHhhchhhhhcccCCCCCChHhhhcCCCCCCC
Q 014741          176 -MK-EKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLT  253 (419)
Q Consensus       176 -~~-~~~~~~~~~~~ylAlHLRfE~DMlA~sgC~~g~~~~E~~eL~~~R~~~~~~~~~~~~~~~~~~~~~~R~~G~CPLt  253 (419)
                       .. ........+++|+|+|+|-+.=+.+...|...    ......                                  
T Consensus       252 w~~~~~~~~~~~~~~y~~~H~Rr~d~~~~~~~~~ps----~~~~~~----------------------------------  293 (408)
T 4ap5_A          252 WMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPS----LEGAVR----------------------------------  293 (408)
T ss_dssp             GGGCCCCTTCBCCEEEEEEEECCTTTTTTTCSSSCC----HHHHHH----------------------------------
T ss_pred             HhhhhcccccccCCCccccccccccchhhhhccCCC----HHHHHH----------------------------------
Confidence             00 01112234678999999976322333333211    111111                                  


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEeeceecCcccccchhHhhCCCccccccCCCccccccccccccccchhheeeeccCceee
Q 014741          254 PEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFA  333 (419)
Q Consensus       254 PeEvgl~L~alGf~~~T~IYlA~geiyGG~~~L~pL~~~FPnl~tKe~L~s~~EL~pf~~~ss~laALDy~Vc~~SDvFv  333 (419)
                        .+.-+++..   +-+.||||+-+.   +..+.-|++.+|.++.-..  ..+++..+.  ...+|.||-+||.+||+||
T Consensus       294 --~i~~~~~~~---~~~~VyiATD~~---~~~~~~l~~~~~~~~~~~~--~~~~~~~~~--d~~~a~idq~Ic~~a~~Fi  361 (408)
T 4ap5_A          294 --KIRSLMKTH---RLDKVFVATDAV---RKEYEELKKLLPEMVRFEP--TWEELELYK--DGGVAIIDQWICAHARFFI  361 (408)
T ss_dssp             --HHHHHHHHH---TCSCEEEEECCC---HHHHHHHHHHCTTEECCCC--CHHHHHHHH--HHHHHHHHHHHHHTEEEEE
T ss_pred             --HHHHHHHhc---CCCEEEEeCCCc---hhHHHHHHHhCCCcEEecC--cchhhhccC--cchhhHHHHHHHHhCCeeE
Confidence              111122222   334699998742   3446789999998764332  233444443  3457899999999999999


Q ss_pred             ecCCCCchhhhhhhhhccccCCCCcc
Q 014741          334 MTDSGSQLSSLVSGYRIYYGGGKMPT  359 (419)
Q Consensus       334 ~t~~G~n~a~~v~GhR~y~G~~~~kT  359 (419)
                      +|.. |+|+..|.=.|-+.|+....|
T Consensus       362 Gt~~-StfS~~I~~eR~~~G~~~~~t  386 (408)
T 4ap5_A          362 GTSV-STFSFRIHEEREILGLDPKTT  386 (408)
T ss_dssp             BCTT-CHHHHHHHHHHHHHTBCGGGT
T ss_pred             eCCc-CchhHHHHHHHHhcCCCCCcc
Confidence            9985 479999999999999875434



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00