Citrus Sinensis ID: 014769

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
Protein Sequence
MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHcccccHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHcccEEEEEEccccccccccHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccEEEEcccccccccccccccHHccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHccEEEEccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHccccEEEccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHEEEEcHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHcccEEEEEEccHHHcccccHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEccccccEcccccccHEEEccccccEEEEEcccHcEcccccEEEEEEcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccHHHHHcccccccHHHHHHHHHHccEEEEEcccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mengaenkwgfedkqehkaapavtVKTSLASIIDsvnkndprpvvplgygdptafpcfrtAVEAEDAIVDAVRsgkfncyatnsgippaRRAIADYLSrdlpyklsadDVYVTLGCKQAVEVILSVLarpganvllprpgwpyyegiaqrKQVEVRhfdllpernwevDLDAVEALADKNTAAMVIinpgnpcgnvftyHHLQEIAEMARKLRVMVVADEVyghltfgsipytpmglfgsiVPVItlgsiskrwlvpgwrfgwlvtndpngifqksgiidSIKDCLsiysdiptfiqgaIPQILEKTKEDFFCKLIDTLRESAEICYdgvkeipciscpnkpegsmvtmvklnpwlledINDDIEFALKLAKeesvivtpGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH
Flexible Loop (DISEMBL)
mengaenkwgfedkqehkaapavTVKTSLASIIdsvnkndprpvvPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFncyatnsgippaRRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH
Low Complexity Region (SEG)
MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTaveaedaivdavRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH
Disordered region (IsUnstruct)
************************V*TSLASIIDSVN***PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF********
Disordered Region (DISOPRED)
**************************TS***************VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH****
Disordered Region (DISEMBL)
MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA*********
Disordered Region (DISPRO)
********WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	419	2.2.26 [Sep-21-2011]
Q9FN30	414	Probable aminotransferase	yes	no	0.971	0.983	0.552	1e-137
Q9LVY1	420	Tyrosine aminotransferase	no	no	0.995	0.992	0.543	1e-136
Q9ST03	551	Nicotianamine aminotransf	N/A	no	0.983	0.747	0.552	1e-134
Q9ST02	461	Nicotianamine aminotransf	N/A	no	0.926	0.841	0.583	1e-134
Q9SIV0	462	S-alkyl-thiohydroximate l	no	no	0.992	0.900	0.492	1e-129
Q67Y55	449	Probable aminotransferase	no	no	0.978	0.913	0.495	1e-124
Q9SK47	445	Probable aminotransferase	no	no	0.985	0.928	0.466	1e-109
Q8VYP2	424	Probable aminotransferase	no	no	0.854	0.844	0.5	1e-101
Q9SUR6	422	Cystine lyase CORI3 OS=Ar	no	no	0.861	0.855	0.487	2e-99
Q8QZR1	454	Tyrosine aminotransferase	yes	no	0.904	0.834	0.368	3e-74

>sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2 OS=Arabidopsis thaliana GN=At5g53970 PE=2 SV=1

 Score =  489 bits (1258), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/422 (55%), Positives = 304/422 (72%), Gaps = 15/422 (3%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDP---RPVVPLGYGDPTAFPC 57
           MENGA                 +T+K  L+ +++S+   +    + V+ LG GDPT + C
Sbjct: 1   MENGATT------------TSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSC 48

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117
           FRT   +  A+ D++ S KF+ Y+   G+P ARRAIA+YLSRDLPYKLS DDV++T GC 
Sbjct: 49  FRTTQVSLQAVSDSLLSNKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCT 108

Query: 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177
           QA++V LS+LARP AN+LLPRPG+P YE  A+ + +EVR+ DLLPE  WE+DLDAVEALA
Sbjct: 109 QAIDVALSMLARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALA 168

Query: 178 DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237
           D+NT A+V+INPGNPCGNV++Y HL +IAE A+KL  +V+ADEVYGHL FGS P+ PMG+
Sbjct: 169 DENTVALVVINPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGV 228

Query: 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQ 297
           FGSIVPV+TLGS+SKRW+VPGWR GW VT DP+G F+   II+  K    I     TFIQ
Sbjct: 229 FGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQ 288

Query: 298 GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357
            A+P ILE+T E FF K +++L+ S++IC D +KEIPCI   ++PEGSM  MVKLN  LL
Sbjct: 289 AAVPTILEQTDESFFKKTLNSLKNSSDICCDWIKEIPCIDSSHRPEGSMAMMVKLNLSLL 348

Query: 358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
           ED++DDI+F  KLA+EESVI+ PG  VGLKNWLRI F A+ +++++   R+K F  RH K
Sbjct: 349 EDVSDDIDFCFKLAREESVILLPGTAVGLKNWLRITFAADATSIEEAFKRIKCFYLRHAK 408

Query: 418 KH 419
             
Sbjct: 409 TQ 410

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: -

>sp|Q9LVY1|TAT_ARATH Tyrosine aminotransferase OS=Arabidopsis thaliana GN=TAT PE=2 SV=1

 Score =  486 bits (1252), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 227/418 (54%), Positives = 310/418 (74%), Gaps = 1/418 (0%)

Query: 2   ENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTA 61
           ENGA+ +W F   +  + + ++T++  L ++I+ ++  D RPV+PLG+GDP+ FP FRT 
Sbjct: 3   ENGAK-RWNFGANEVVERSNSLTIRDYLNTLINCLDGGDVRPVIPLGHGDPSPFPSFRTD 61

Query: 62  VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121
             A +AI DAVRS KFN Y+++SG+P AR+A+A+YLS DL Y++S +DV++T GC QA+E
Sbjct: 62  QAAVEAICDAVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQAIE 121

Query: 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT 181
           +++S LA PGAN+LLPRP +P Y+  A   Q+EVR+FDLLPE  W+VDLD VEALAD  T
Sbjct: 122 ILISALAIPGANILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADDKT 181

Query: 182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241
            A+++INP NPCGNVF+  HLQ+IAE A KL ++V+ADEVY H  FG  P+  M  F  +
Sbjct: 182 VAILVINPCNPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAEL 241

Query: 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIP 301
           VPVI LG+ISKRW VPGWR GW+VT DP+GI + SG + ++ + +++ +D  TFIQGA+P
Sbjct: 242 VPVIVLGAISKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQGAMP 301

Query: 302 QILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN 361
            I+  TKE+FF   ++ +++ AEICY+ + +IPCI+CP KPEGSM TMVKLN  LLEDI+
Sbjct: 302 DIIGNTKEEFFSSKLEMVKKCAEICYEELMKIPCITCPCKPEGSMFTMVKLNFSLLEDIS 361

Query: 362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           DD++F  KLAKEES+I+ PG  VGLKNWLRI F  E   L +G  R+K F +RH+K  
Sbjct: 362 DDLDFCSKLAKEESMIILPGQAVGLKNWLRITFAVELELLIEGFSRLKNFTERHSKNQ 419

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using L-glutamate in vitro. Can convert phenylalanine to phenylpyruvate and catalyze the reverse reaction in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ST03|NAATB_HORVU Nicotianamine aminotransferase B OS=Hordeum vulgare GN=naat-B PE=1 SV=2

 Score =  479 bits (1232), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/416 (55%), Positives = 314/416 (75%), Gaps = 4/416 (0%)

Query: 8   KWGFEDKQEHKAAPA---VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEA 64
           +W F   ++   A     ++++     I  SV +  PRPV+PL +GDP+ FP FRTAVEA
Sbjct: 131 EWNFAGAKDGVLAATGANMSIRAIRYKISASVQEKGPRPVLPLAHGDPSVFPAFRTAVEA 190

Query: 65  EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVIL 124
           EDA+  AVR+G+FNCY    G+P AR A+A++LS+ +PY LSADDV++T G  QA+EVI+
Sbjct: 191 EDAVAAAVRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVII 250

Query: 125 SVLAR-PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183
            VLA+  GAN+LLPRPG+P YE  A   ++EVRHFDL+P++ WE+D+D++E++ADKNT A
Sbjct: 251 PVLAQTAGANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTA 310

Query: 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP 243
           MVIINP NPCG+V++Y HL ++AE+A++L ++V+ADEVYG L  GS P+ PMG+FG I P
Sbjct: 311 MVIINPNNPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITP 370

Query: 244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQI 303
           V+++GS+SK W+VPGWR GW+   DP  I Q++ I  SI + L++ +D  TFIQ A+PQI
Sbjct: 371 VLSIGSLSKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAALPQI 430

Query: 304 LEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDD 363
           LE TKEDFF  +I  L+ES+EICY  +KE   I+CP+KPEGSM  MVKLN  LLE+I+DD
Sbjct: 431 LENTKEDFFKAIIGLLKESSEICYKQIKENKYITCPHKPEGSMFVMVKLNLHLLEEIDDD 490

Query: 364 IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           I+F  KLAKEESVI+ PG  +G+ NW+RI F   PS+L+DGLGR+K+FCQR+ K++
Sbjct: 491 IDFCCKLAKEESVILCPGSVLGMANWVRITFACVPSSLQDGLGRIKSFCQRNKKRN 546

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9ST02|NAATA_HORVU Nicotianamine aminotransferase A OS=Hordeum vulgare GN=naat-A PE=1 SV=2

 Score =  478 bits (1230), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/389 (58%), Positives = 307/389 (78%), Gaps = 1/389 (0%)

Query: 32  IIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARR 91
           I  SV ++ PRPV+PL +GDP+ FP FRTAVEAEDA+  A+R+G+FNCYA   G+P AR 
Sbjct: 68  ISASVEESGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAALRTGQFNCYAAGVGLPAARS 127

Query: 92  AIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQR 150
           A+A++LS+ +PYKLSADDV++T G  QA+EVI+ VLA+  GAN+LLPRPG+P YE  A  
Sbjct: 128 AVAEHLSQGVPYKLSADDVFLTAGGTQAIEVIIPVLAQTAGANILLPRPGYPNYEARAAF 187

Query: 151 KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
            ++EVRHFDL+P++ WE+D+D++E++ADKNT AMVIINP NPCG+V++Y HL ++AE+AR
Sbjct: 188 NKLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPNNPCGSVYSYDHLAKVAEVAR 247

Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270
           KL ++V+ADEVYG L  GS P+ PMG+FG I PV+++GS+SK W+VPGWR GW+   DP 
Sbjct: 248 KLGILVIADEVYGKLVLGSAPFIPMGVFGHIAPVLSIGSLSKSWIVPGWRLGWVAVYDPT 307

Query: 271 GIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
            I +K+ I  SI + L++ +D  TF+Q A+P+ILE TK DFF ++I  L+ES+EICY  +
Sbjct: 308 KILEKTKISTSITNYLNVSTDPATFVQEALPKILENTKADFFKRIIGLLKESSEICYREI 367

Query: 331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWL 390
           KE   I+CP+KPEGSM  MVKLN  LLE+I+DDI+F  KLAKEESVI+ PG  +G++NW+
Sbjct: 368 KENKYITCPHKPEGSMFVMVKLNLHLLEEIHDDIDFCCKLAKEESVILCPGSVLGMENWV 427

Query: 391 RIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           RI F   PS+L+DGL R+K+FCQR+ KK+
Sbjct: 428 RITFACVPSSLQDGLERVKSFCQRNKKKN 456

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9SIV0|SUR1_ARATH S-alkyl-thiohydroximate lyase SUR1 OS=Arabidopsis thaliana GN=SUR1 PE=1 SV=1

 Score =  462 bits (1188), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 205/416 (49%), Positives = 291/416 (69%)

Query: 3   NGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAV 62
           NG  + W F    +   A  VT++  +  + D+  K+  + ++PLG+GDP+ +PCFRT +
Sbjct: 27  NGQSSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCI 86

Query: 63  EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122
           EAEDA+VD +RSGK N Y   +GI PARRA+ADY++RDLP+KL+ +D+++T GC Q +E+
Sbjct: 87  EAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEI 146

Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
           +   LARP AN+LLPRPG+P+Y+  A    +EVR FDLLPE+ WE+DL+ +EA+AD+NT 
Sbjct: 147 VFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTV 206

Query: 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV 242
           AMV+INP NPCGNV+++ HL+++AE ARKL +MV++DEVY    FG  P+  MG F SIV
Sbjct: 207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIV 266

Query: 243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQ 302
           PV+TL  ISK W+VPGW+ GW+  NDP G+F+ + ++ SIK  L +  D  T IQ A+P 
Sbjct: 267 PVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPA 326

Query: 303 ILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIND 362
           ILEK  ++FF K    L+ + ++  D +K+IPC+ CP KPE     + KL   L+++I D
Sbjct: 327 ILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKD 386

Query: 363 DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
           DI+F +KLA+EE+++  PG  +GLKNW+RI    E   L+D L R+K FC RH KK
Sbjct: 387 DIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442

C-S lyase involved in glucosinolate biosynthesis. Converts S-(alkylacetohydroximoyl)-L-cysteine to thiohydroximate. Functions in auxin homeostasis. Probably required for glucosinolate activation in response to pathogens.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q67Y55|TAT1_ARATH Probable aminotransferase TAT1 OS=Arabidopsis thaliana GN=At4g28420 PE=2 SV=1

 Score =  444 bits (1142), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 203/410 (49%), Positives = 284/410 (69%)

Query: 9   WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAI 68
           W F        A +VT++  +  + D  + +  +P++PL +GDP+ +PC+RT++  E+A+
Sbjct: 27  WRFRGSDNAAKASSVTMRVIVYKLFDECSLDVKKPLLPLAHGDPSVYPCYRTSILVENAV 86

Query: 69  VDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA 128
           VD +RSGK N Y   +GI PAR+A+ADY++RDL  K+  +DV++T+GC Q +EV+L  LA
Sbjct: 87  VDVLRSGKGNSYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSLA 146

Query: 129 RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188
           RP AN+LLPRP +P+YE  A    +EVR FDLLPE+ WE+DL  +EA+AD+NT AMVIIN
Sbjct: 147 RPNANILLPRPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVIIN 206

Query: 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG 248
           P NPCGNV++Y HL+++AE A+KL +MV+ DEVY    FG  P+ PMG F SI PVITLG
Sbjct: 207 PNNPCGNVYSYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITLG 266

Query: 249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK 308
            ISK W+VPGWR GW+  NDP GI + +G++ SI+  L I  D  T +Q A+P+IL K  
Sbjct: 267 GISKGWIVPGWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQAALPEILGKAN 326

Query: 309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFAL 368
           ++ F K    L+++ E+  D +KEIPC+ C  KPE     + KL   LLEDI DD++F +
Sbjct: 327 KELFAKKNSMLKQNVELVCDRLKEIPCLVCNKKPESCTYLLTKLKLPLLEDIEDDMDFCM 386

Query: 369 KLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
           KLAKEE++++ PG+ +GLKNW+RI    E   L+D L R+  FC+RH KK
Sbjct: 387 KLAKEENLVLLPGVALGLKNWIRITIGVEAQMLEDALERLNGFCKRHLKK 436

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SK47|TAT3_ARATH Probable aminotransferase TAT3 OS=Arabidopsis thaliana GN=TAT3 PE=2 SV=1

 Score =  394 bits (1013), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/414 (46%), Positives = 276/414 (66%), Gaps = 1/414 (0%)

Query: 3   NGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAV 62
           N   N W F+       A AVT++     +  +   N  + ++    G+P+A   FRT  
Sbjct: 10  NANANVWRFKGNGATSDAAAVTLRKLAFGMFKNCTMNSGKTILFPTPGEPSAHSNFRTCP 69

Query: 63  EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122
           EAE+A+  A RSG  N YA + G+  ARRA+A+YL+ +LP KL A+DVY+T GC QA+E+
Sbjct: 70  EAEEAVAAAARSGMANSYAPSPGVFKARRAVAEYLNGELPTKLKAEDVYITGGCNQAIEI 129

Query: 123 ILSVLA-RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT 181
           ++  LA  P AN+LLPRPG+P+Y+  A    +E+R +DLLPE +WE++LD +EA AD+NT
Sbjct: 130 VIDSLAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDLLPESDWEINLDGLEAAADENT 189

Query: 182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241
            AMVIINP NPCGNV+TY HL ++AEMARKL +M+++DEVY H+ +G  P+ PMG F SI
Sbjct: 190 VAMVIINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASI 249

Query: 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIP 301
            PVITLGSISK W+ PGWR GW+  NDPNGIF  +G++ +I+D L +       +Q A+P
Sbjct: 250 APVITLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQAIEDFLDLTPQPSFILQEALP 309

Query: 302 QILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN 361
            ILEKT ++FF K I  +R + E+  + +K+IPC+ CP KPE      +KL+  +L +I 
Sbjct: 310 DILEKTPKEFFEKKIKAMRRNVELSCERLKDIPCLFCPKKPESCSYLWLKLDTSMLNNIK 369

Query: 362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
           +D +F  KL  EES+I+ PG+ +G +NW+RI+   + S +++   R+K F  RH
Sbjct: 370 NDFDFCTKLVSEESLILIPGVALGAENWVRISIGTDESVVQEIFDRLKGFYDRH 423

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VYP2|TAT4_ARATH Probable aminotransferase TAT4 OS=Arabidopsis thaliana GN=At4g23590 PE=2 SV=1

 Score =  368 bits (944), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/358 (50%), Positives = 247/358 (68%)

Query: 59  RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118
            T+  AE A+V AV  G  N YA + G+P A+RA+A+YL+RDL  KL+ DDVY+T+GCKQ
Sbjct: 52  ETSHTAEKAVVKAVLCGTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQ 111

Query: 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178
           A+E+ +S+LA+P AN+LLPRPG+P+    +  K +EVR ++ +PER++E+D ++V  + D
Sbjct: 112 AIELAVSILAKPKANILLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVD 171

Query: 179 KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238
           +NT A+ IINP NP GN +T  HL+++A +AR+L +MVV+DEVY    FGS P+ PMG F
Sbjct: 172 ENTFAIFIINPHNPNGNYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKF 231

Query: 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQG 298
            SIVPVITLGSISK W+VPGWR GWL  +D NG+F+ + ++ + K+ L I S  PT IQ 
Sbjct: 232 SSIVPVITLGSISKGWIVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQA 291

Query: 299 AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358
           AIP ILEKT +DFF K    L++  +  Y  +K IP ++C  KPE       KL+P    
Sbjct: 292 AIPTILEKTPQDFFEKRGIFLKDKVDFGYSKLKNIPTLTCYMKPESCTFLWTKLDPLHFV 351

Query: 359 DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416
           DI DD +F  KLAKEE+++V PGI  G  NWLR +   E   L+D   R+K+FC+RH+
Sbjct: 352 DIEDDHDFCRKLAKEENLVVLPGIAFGQNNWLRHSIDMETPRLEDAFERLKSFCERHS 409

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SUR6|CORI3_ARATH Cystine lyase CORI3 OS=Arabidopsis thaliana GN=CORI3 PE=1 SV=1

 Score =  362 bits (930), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 176/361 (48%), Positives = 248/361 (68%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117
             T+  AE A+V AV  G  N YA + G+  A+ A+A+YL++ LP KL+ADDV++TLGCK
Sbjct: 51  LETSNTAEKAVVKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKLTADDVFMTLGCK 110

Query: 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177
           QA+E+ + +LA+P ANVLLP PG+P+    +  K +EVRH++ LPE+N+E+D D+V AL 
Sbjct: 111 QAIELAVDILAKPKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEKNFEIDFDSVRALV 170

Query: 178 DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237
           D+NT A+ IINP NP GN ++  HL+++AE+A++L++MVV+DEV+    FGS P+ PMG 
Sbjct: 171 DENTFAIFIINPHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRWTLFGSNPFVPMGK 230

Query: 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQ 297
           F SIVPV+TLGSISK W VPGWR GWL  +D +G+F+ + ++ + +D L I ++ PT IQ
Sbjct: 231 FSSIVPVVTLGSISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQDFLQINNNPPTVIQ 290

Query: 298 GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357
            AIP ILEKT ++FF K    L++  E  Y  +K IP ++C  KPE       +L+    
Sbjct: 291 AAIPDILEKTPQEFFDKRQSFLKDKVEFGYSKLKYIPSLTCYMKPEACTFLWTELDLSSF 350

Query: 358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
            DI DD +F  KLAKEE+++V PGI    KNWLR +   E   L+D L R+K+FC RH+ 
Sbjct: 351 VDIEDDQDFCNKLAKEENLVVLPGIAFSQKNWLRHSIDMETPVLEDALERLKSFCDRHSN 410

Query: 418 K 418
           K
Sbjct: 411 K 411

Possesses cystine lyase and tyrosine aminotransferase activities in vitro. May be required for the synthesis of homogentisate a precursor of tocopherols and plastoquinones.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8QZR1|ATTY_MOUSE Tyrosine aminotransferase OS=Mus musculus GN=Tat PE=1 SV=1

 Score =  279 bits (714), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 145/394 (36%), Positives = 229/394 (58%), Gaps = 15/394 (3%)

Query: 29  LASIIDS--VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           + +I+D+  V  N  + V+ L  GDPT F    T  E   A+ DA+ SGK+N YA + G 
Sbjct: 56  IRAIVDNMKVKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGY 115

Query: 87  PPARRAIADYLS-RDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
             +R  +A Y    + P  L A DV +T GC QA+E+ L+VLA PG N+L+PRPG+  Y 
Sbjct: 116 LSSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYR 173

Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
            +A+   +EV+ ++LLPE++WE+DL  +E+L D+ TA +V+ NP NPCG+VF+  HLQ+I
Sbjct: 174 TLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKI 233

Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
             +A +  V ++ADE+YG + F    Y PM    + VP+++ G ++KRWLVPGWR GW++
Sbjct: 234 LAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAKRWLVPGWRLGWIL 293

Query: 266 TNDPNGIFQKSGIIDSIKDCLSIYSDI----PTFIQGAIPQILEKTKEDFFCKLIDTLRE 321
            +D   IF      + I+D L   S       T +QGA+  IL++T ++F+   +  L+ 
Sbjct: 294 IHDRRDIFG-----NEIRDGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKS 348

Query: 322 SAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
           +A++CY  +  IP +  P +P G+M  MV +      +  +D+EF  +L  E+SV   P 
Sbjct: 349 NADLCYGALSAIPGLQ-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPA 407

Query: 382 IYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
                 N+ R+        + +   R++ FC++H
Sbjct: 408 TCFEYPNFFRVVITVPEVMMLEACSRIQEFCEQH 441

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using glutamic acid, with 2-oxoglutarate as cosubstrate (in vitro). Has no transaminase activity towards phenylalanine.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	419
225446437	419	PREDICTED: tyrosine aminotransferase [Vi	1.0	1.0	0.658	1e-170
255553657	419	tyrosine aminotransferase, putative [Ric	1.0	1.0	0.658	1e-166
359485208	419	PREDICTED: LOW QUALITY PROTEIN: tyrosine	1.0	1.0	0.642	1e-166
224133454	418	aminotransferase family protein [Populus	0.992	0.995	0.649	1e-166
225446435	419	PREDICTED: tyrosine aminotransferase iso	1.0	1.0	0.639	1e-163
302143330	518	unnamed protein product [Vitis vinifera]	1.0	0.808	0.639	1e-163
225446431	419	PREDICTED: tyrosine aminotransferase [Vi	1.0	1.0	0.634	1e-162
224133450	417	aminotransferase family protein [Populus	0.980	0.985	0.644	1e-161
224133458	418	aminotransferase family protein [Populus	0.995	0.997	0.649	1e-161
147844187	424	hypothetical protein VITISV_034250 [Viti	1.0	0.988	0.625	1e-159

>gi|225446437|ref|XP_002276551.1| PREDICTED: tyrosine aminotransferase [Vitis vinifera] gi|302143331|emb|CBI21892.3| unnamed protein product [Vitis vinifera]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 276/419 (65%), Positives = 343/419 (81%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENG++ +WGF+  QE   A AVT++  L  ++ ++++ D RPV+PLG+GDP+AFPCFRT
Sbjct: 1   MENGSKKRWGFQGNQELNMAAAVTIRGVLGKVMSNLSEEDNRPVIPLGHGDPSAFPCFRT 60

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
              AEDAI DAVRS KFN YA   G+ PARRA+A+YLSRDLPY+LS DD+Y+T+GC QA+
Sbjct: 61  TPVAEDAIADAVRSAKFNSYAPTVGLLPARRAVAEYLSRDLPYQLSPDDIYLTIGCTQAI 120

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           E+++ VLARPGAN+LLPRPG+PYYE  A    +EVRHFDLLPE+ WEVDL+AV+ALAD+N
Sbjct: 121 EIMIQVLARPGANILLPRPGFPYYEARAAADNLEVRHFDLLPEQGWEVDLEAVKALADEN 180

Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           T AMVI+NPGNP G+VFTY HL+++AE AR L +MV++DEVYGHL FGS P+ PMG+FGS
Sbjct: 181 TVAMVIVNPGNPSGSVFTYEHLKKVAETARNLGIMVISDEVYGHLAFGSKPFVPMGVFGS 240

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           IVP++T+GSISKRW+VPGWR GWLVTND NGI  KSG+++SI  CL+I SD  TFIQGAI
Sbjct: 241 IVPIVTVGSISKRWVVPGWRLGWLVTNDLNGILHKSGVVESIISCLNISSDPATFIQGAI 300

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
           P+ILEKTKEDFF   I  LRE A+I +D +K IPCI+CP KPEGSM  MVKLN  LLEDI
Sbjct: 301 PEILEKTKEDFFSNTISILRECADIIHDRIKGIPCITCPQKPEGSMFVMVKLNLSLLEDI 360

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           +DD+EF +KL+KEESVIV PG+ VG+KNWLR+ F  +P +L+DGLGR+KAF QRH KK 
Sbjct: 361 DDDVEFCMKLSKEESVIVLPGVSVGMKNWLRVTFAIDPPSLEDGLGRIKAFYQRHAKKE 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553657|ref|XP_002517869.1| tyrosine aminotransferase, putative [Ricinus communis] gi|223542851|gb|EEF44387.1| tyrosine aminotransferase, putative [Ricinus communis]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 276/419 (65%), Positives = 338/419 (80%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENG   KWGF   +   AA AVTV+  L ++  ++NK D R V+PLG+GDP+AFP F T
Sbjct: 1   MENGVSTKWGFRANEGLTAAAAVTVRGVLDALNSNLNKEDERTVIPLGHGDPSAFPSFLT 60

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
           A  AEDAIVDA++S K+NCY+   G+ PARRAIADYL+ DLPY+LS DDV+VTLGC QA+
Sbjct: 61  ASAAEDAIVDALKSAKYNCYSPTVGLLPARRAIADYLNIDLPYELSPDDVFVTLGCTQAI 120

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           EV L+VL RPGAN+LLPRPG+PYY GIA +  +EVRHFDLLPE+ WEV+ +AVEALAD+N
Sbjct: 121 EVSLTVLGRPGANILLPRPGFPYYTGIAAQTHLEVRHFDLLPEKGWEVNFEAVEALADEN 180

Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           TAAMVIINPGNPCGNV++Y HL++IAE ARKL ++V+ADEVY HLTFGS P+ PMG+FGS
Sbjct: 181 TAAMVIINPGNPCGNVYSYEHLKKIAETARKLGILVIADEVYAHLTFGSTPFVPMGVFGS 240

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           +VPV+TLGSISKRW+VPGWR GWLV +DP GI Q++G++DSI  CL+I SD  TFIQGAI
Sbjct: 241 VVPVLTLGSISKRWIVPGWRLGWLVLSDPKGILQETGVVDSITSCLNISSDPATFIQGAI 300

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
           PQIL  TK+DFF K+ + L+E+AE+CYD +++IPCI+C  KPEGSM  M KLN   L+ I
Sbjct: 301 PQILTNTKKDFFFKINNLLQEAAELCYDRIQDIPCITCLRKPEGSMFLMAKLNLSSLKGI 360

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
            DD++F LKLAKEESVIV PGI VGLKNWLRI F  E S L+ GLGR++AF +RH KK 
Sbjct: 361 EDDMDFCLKLAKEESVIVLPGITVGLKNWLRITFAIELSTLEVGLGRIRAFYERHAKKQ 419

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485208|ref|XP_003633232.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine aminotransferase-like [Vitis vinifera]

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 269/419 (64%), Positives = 335/419 (79%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENG   +WGF+  +E   A ++T++  L  ++ ++N  D RPV+PLG+GDP+AF CFRT
Sbjct: 1   MENGGRKRWGFQGNEELDKAASITIRGVLNKVMSNLNPQDHRPVIPLGHGDPSAFSCFRT 60

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
              AEDAIVDA+RS KFN YA   GI PARRAIA++LS DLPYKLS DD+++T+GC QA+
Sbjct: 61  TPVAEDAIVDALRSRKFNSYAPAVGILPARRAIAEHLSHDLPYKLSPDDIFLTIGCSQAI 120

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           E+I+ VLARPGAN+LLPRPG+P+YE  A    +E RHFDLLPE+ WEVDL+ V+ALAD+N
Sbjct: 121 ELIIKVLARPGANILLPRPGYPFYESHAAANHLEFRHFDLLPEKGWEVDLEGVKALADEN 180

Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           T AMVIINPGNPCGN+FT+ HL+++AE AR L ++V++DEVY HL FG  PY  MG FGS
Sbjct: 181 TVAMVIINPGNPCGNIFTHEHLKKVAETARMLGILVISDEVYAHLAFGGNPYVSMGAFGS 240

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           I PVITLGSISKRW+VPGWR GWLVTNDPNGI  KSG+++SI   L+I SD  TFIQGA+
Sbjct: 241 ITPVITLGSISKRWIVPGWRLGWLVTNDPNGILHKSGVVESIVSSLNISSDPATFIQGAV 300

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
           PQI+EKT +DF+ K+I  LRE+A  C+DG+++IPC++CP+KPEGSM  MVKLN  LLEDI
Sbjct: 301 PQIIEKTTDDFYLKIISILRETAGTCFDGIEDIPCLTCPHKPEGSMFVMVKLNLSLLEDI 360

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
            DDI+F +KL+KEESVIV PG  VG+KNWLRI F  EP +L+DGLGR+KAF QRH KK 
Sbjct: 361 EDDIDFCMKLSKEESVIVFPGFAVGMKNWLRITFAIEPPSLEDGLGRIKAFYQRHAKKQ 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133454|ref|XP_002328046.1| aminotransferase family protein [Populus trichocarpa] gi|222837455|gb|EEE75834.1| aminotransferase family protein [Populus trichocarpa]

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 271/417 (64%), Positives = 343/417 (82%), Gaps = 1/417 (0%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENG++ KWGF+  +    + AVTV+  L  + D++NK D R V+PL +GDP+AFPCFRT
Sbjct: 1   MENGSK-KWGFQANKSLSTSSAVTVRGVLNVLQDNLNKEDTRQVMPLAHGDPSAFPCFRT 59

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
              A++A+VDAVRS K+N YA   G+ PARR++AD+L+RDLPYKLS DDV++TLGC QA+
Sbjct: 60  TTVADEAVVDAVRSAKYNHYAPTVGLLPARRSVADFLNRDLPYKLSPDDVFLTLGCTQAI 119

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           E+ ++VLARPGAN+LLPRPG+PYYE  A    +E RHFDL+PE+ WEVDLDAVEALAD+N
Sbjct: 120 EITITVLARPGANILLPRPGFPYYEARAAHSHLEARHFDLIPEKGWEVDLDAVEALADEN 179

Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           T AMV+INPGNPCG+V++Y HLQ+IAE ARKL +MV+ADEVYGHLTFG+ P+ PMG+FGS
Sbjct: 180 TVAMVVINPGNPCGSVYSYQHLQKIAETARKLGIMVIADEVYGHLTFGNSPFVPMGVFGS 239

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           IVPV+TLGSISKRW+VPGWR GWLVT+DPNGI Q+SG+++SIK CL+I SD  TFIQGAI
Sbjct: 240 IVPVLTLGSISKRWIVPGWRIGWLVTSDPNGILQESGVVESIKGCLNISSDPVTFIQGAI 299

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
           PQI++ T EDFF K+ + LRE+A+ICY+ +++IPCI+ P+KPEGSM  MVKLN   LE I
Sbjct: 300 PQIIDNTTEDFFTKINNILREAADICYEKIQDIPCITLPHKPEGSMFVMVKLNLSSLEGI 359

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
            DD++F LKLAKEESV++ PG  VG+KN+LRI F  EPSAL+ GL R+KAF +RH K
Sbjct: 360 GDDMDFCLKLAKEESVMILPGTAVGMKNFLRITFAIEPSALEVGLERLKAFYERHAK 416

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446435|ref|XP_002276464.1| PREDICTED: tyrosine aminotransferase isoform 1 [Vitis vinifera]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 268/419 (63%), Positives = 337/419 (80%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENGA  +WGF   Q    A ++TV+  L  +I ++N  D RPV+ LG GDP+AF CFRT
Sbjct: 1   MENGAAERWGFRGNQVLDKAASITVRGVLRKVISNLNPQDRRPVITLGQGDPSAFSCFRT 60

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
           A EAE+AIVDAVRS +F+ Y  + G+ PARRAIA+YLS DLPYKLS DDVY+T+GC QA+
Sbjct: 61  APEAEEAIVDAVRSREFDSYPPDVGVLPARRAIAEYLSTDLPYKLSPDDVYLTVGCGQAI 120

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           E+I+ VLARPGAN+LLPRPG+ +YE +A    +E R FDLLPE+ WEVDL+ V+ALAD+N
Sbjct: 121 ELIIKVLARPGANILLPRPGYAFYEALAAANHLEFRRFDLLPEKVWEVDLEGVKALADEN 180

Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           T AMVIINPGNPCGNVFT+ HL+++AE AR L ++V+ADEVYGHL FGS P+ PMG+FGS
Sbjct: 181 TVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPFVPMGVFGS 240

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           I PVITLGSISKRW+VPGWR GWLVTNDPNGI  KSGI+++I   L+I +D  +FIQGA+
Sbjct: 241 ITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGIVETIVSYLNICADPTSFIQGAV 300

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
           PQI+EKT +DFF ++I  L ++A+IC+DG+ +IPCI+CP+KPEG+M  MVKLN  LLEDI
Sbjct: 301 PQIIEKTTDDFFSRIISLLGKTADICFDGLADIPCITCPHKPEGAMSVMVKLNVSLLEDI 360

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           +DD++F +KL+KEESVI+  G  VG+KNWLRI F  EP  L+DG+GR+KAFCQRH KK 
Sbjct: 361 DDDMDFCMKLSKEESVIILAGFAVGMKNWLRITFATEPPFLEDGIGRIKAFCQRHAKKQ 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143330|emb|CBI21891.3| unnamed protein product [Vitis vinifera]

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 268/419 (63%), Positives = 337/419 (80%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENGA  +WGF   Q    A ++TV+  L  +I ++N  D RPV+ LG GDP+AF CFRT
Sbjct: 100 MENGAAERWGFRGNQVLDKAASITVRGVLRKVISNLNPQDRRPVITLGQGDPSAFSCFRT 159

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
           A EAE+AIVDAVRS +F+ Y  + G+ PARRAIA+YLS DLPYKLS DDVY+T+GC QA+
Sbjct: 160 APEAEEAIVDAVRSREFDSYPPDVGVLPARRAIAEYLSTDLPYKLSPDDVYLTVGCGQAI 219

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           E+I+ VLARPGAN+LLPRPG+ +YE +A    +E R FDLLPE+ WEVDL+ V+ALAD+N
Sbjct: 220 ELIIKVLARPGANILLPRPGYAFYEALAAANHLEFRRFDLLPEKVWEVDLEGVKALADEN 279

Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           T AMVIINPGNPCGNVFT+ HL+++AE AR L ++V+ADEVYGHL FGS P+ PMG+FGS
Sbjct: 280 TVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPFVPMGVFGS 339

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           I PVITLGSISKRW+VPGWR GWLVTNDPNGI  KSGI+++I   L+I +D  +FIQGA+
Sbjct: 340 ITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGIVETIVSYLNICADPTSFIQGAV 399

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
           PQI+EKT +DFF ++I  L ++A+IC+DG+ +IPCI+CP+KPEG+M  MVKLN  LLEDI
Sbjct: 400 PQIIEKTTDDFFSRIISLLGKTADICFDGLADIPCITCPHKPEGAMSVMVKLNVSLLEDI 459

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           +DD++F +KL+KEESVI+  G  VG+KNWLRI F  EP  L+DG+GR+KAFCQRH KK 
Sbjct: 460 DDDMDFCMKLSKEESVIILAGFAVGMKNWLRITFATEPPFLEDGIGRIKAFCQRHAKKQ 518

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446431|ref|XP_002275047.1| PREDICTED: tyrosine aminotransferase [Vitis vinifera] gi|302143327|emb|CBI21888.3| unnamed protein product [Vitis vinifera]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 266/419 (63%), Positives = 333/419 (79%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENGA  +WGF   Q    A ++TV+  L  +I ++N  D RPV+ LG GDP+AF  FRT
Sbjct: 1   MENGAAERWGFRGNQVLHKASSITVRGVLGKVISNLNPQDRRPVITLGQGDPSAFSSFRT 60

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
           + EAE+AIVDAVRS KFN Y+ + G+  ARRAIA+YLS DLPYKLS DDVY+T+GC QA+
Sbjct: 61  SPEAEEAIVDAVRSRKFNSYSPDVGVLTARRAIAEYLSADLPYKLSPDDVYLTIGCAQAI 120

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           ++I+ VLA PGAN+LLPRPG+  YE  A    +E R FDLLPE+ WEVDL+ V+ALAD+N
Sbjct: 121 KLIIKVLALPGANILLPRPGYALYEAHAAANHLEFRRFDLLPEKGWEVDLEGVKALADEN 180

Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           T AMVIINPGNPCGNVFT+ HL+++AE AR L ++V+ADEVYGHL FGS PY PMG+FGS
Sbjct: 181 TVAMVIINPGNPCGNVFTHQHLKKVAETARMLGILVIADEVYGHLVFGSNPYVPMGVFGS 240

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           I PVITLGSISKRW+VPGWR GWLVTNDPNGI  KSG++++I   L+I +D  TFI GA+
Sbjct: 241 ITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGVVETIVSSLNICTDPATFIHGAV 300

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
           PQI+EKT +DFF ++I  LR++A+IC+DG+ +IPCI+CP+KPEG+M  MV LN  LLEDI
Sbjct: 301 PQIIEKTTDDFFSRIIGLLRKTADICFDGLADIPCITCPHKPEGAMSVMVNLNVSLLEDI 360

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
            DD++F +KL+KEESVI+ PG  VG++NWLRI F  EP +L+DGLGR+KAFCQRH KK 
Sbjct: 361 EDDMDFCVKLSKEESVIILPGFTVGMENWLRITFATEPPSLEDGLGRIKAFCQRHAKKQ 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133450|ref|XP_002328045.1| aminotransferase family protein [Populus trichocarpa] gi|222837454|gb|EEE75833.1| aminotransferase family protein [Populus trichocarpa]

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 265/411 (64%), Positives = 331/411 (80%)

Query: 8   KWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDA 67
           KW     +      A +++  L  + D ++K+D RPVVPL +GDP+AF CFRT+ EA DA
Sbjct: 7   KWIIRGNELLDETAATSIRGYLIMLYDHLDKDDQRPVVPLSHGDPSAFACFRTSPEAVDA 66

Query: 68  IVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL 127
           IV AV+S +FN YA   GI PARRA+A+YLS DLPY LSADD+Y+T+GC Q++EVILS L
Sbjct: 67  IVHAVQSAEFNSYAPTIGILPARRAVAEYLSADLPYNLSADDIYLTVGCTQSIEVILSAL 126

Query: 128 ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187
           ARPGAN+LLPRPG+P YE  A   ++EVRHFDL+PE+ WEVDL++VEALAD+NTAA+VII
Sbjct: 127 ARPGANILLPRPGYPLYESRASFSKLEVRHFDLIPEKGWEVDLESVEALADENTAAIVII 186

Query: 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247
           +PGNPCGNVF+Y HL+++AE ARKL + V+ADEVYGH+ FGS PY PMG FGSIVPV++L
Sbjct: 187 SPGNPCGNVFSYQHLKKVAETARKLGIFVIADEVYGHIAFGSNPYVPMGEFGSIVPVLSL 246

Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKT 307
           GSISKRW+VPGWR GW+ T DPNGI +K GI+DSIK   +I S+  TF+Q AIPQI EKT
Sbjct: 247 GSISKRWIVPGWRLGWIATCDPNGILKKYGIVDSIKSYFNISSNPATFVQAAIPQIFEKT 306

Query: 308 KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFA 367
           KEDFF K I+ +RE+A+ICY+  KEIPC++CP+KP+GSM  MVKLN  LLEDI+DD++F 
Sbjct: 307 KEDFFSKTINIMREAADICYEKTKEIPCVTCPHKPDGSMFAMVKLNLSLLEDISDDMDFC 366

Query: 368 LKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
           LKLA+EESVI+ PG+ VGLKNWLRI F  EP +L+ GL RMKAFCQRH++K
Sbjct: 367 LKLAREESVIILPGVAVGLKNWLRITFSIEPQSLEQGLDRMKAFCQRHSRK 417

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133458|ref|XP_002328047.1| aminotransferase family protein [Populus trichocarpa] gi|222837456|gb|EEE75835.1| aminotransferase family protein [Populus trichocarpa]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/419 (64%), Positives = 335/419 (79%), Gaps = 2/419 (0%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENG E KW F+  +   +  ++TV+  L  + +++NK D R V+PL +GDP+AFPCFRT
Sbjct: 1   MENGTE-KWSFQASKGMNSTASITVRGVLNRLAETLNKEDKREVIPLAHGDPSAFPCFRT 59

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
              A++AI DAVRS K N YA   G+ PARRA ADYL+RDLPYKLS DDV++TLGCKQA+
Sbjct: 60  TPVADEAIFDAVRSAKNNHYAPTVGLLPARRAAADYLNRDLPYKLSPDDVFLTLGCKQAI 119

Query: 121 EVILSVLAR-PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK 179
           E+ ++VLA  PGANVLLPRPG+PYYE  A    ++VRHFDLLPE+ WEVDL+AVEALAD+
Sbjct: 120 EIAVTVLAAIPGANVLLPRPGFPYYEARAAHSCLDVRHFDLLPEKGWEVDLEAVEALADE 179

Query: 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239
           NT AMVIINPGNPCG+V++Y HL+++AE AR L +MV++DEVYGHLTFGS P+ PMG+F 
Sbjct: 180 NTVAMVIINPGNPCGSVYSYQHLEKVAETARMLGIMVISDEVYGHLTFGSAPFVPMGVFA 239

Query: 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299
           S VPV+TLGSISKRW+VPGWR GWLVTNDPNGI Q SGI+ SIKD L+I SD PTFIQ A
Sbjct: 240 STVPVLTLGSISKRWIVPGWRMGWLVTNDPNGILQDSGIVASIKDYLNISSDPPTFIQAA 299

Query: 300 IPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359
           +PQI+E TK+ FF K+ + L E+A+ICY  +++IPCI CP+KPEGSM  MVKLN  LLE 
Sbjct: 300 VPQIIENTKDGFFSKINNILGEAADICYGKIQDIPCIICPHKPEGSMFVMVKLNLTLLEG 359

Query: 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
           I+DD++F LKLAKEESV+V PGI VG+KNWLRI F  EPSAL+ G  R+K FCQRH K+
Sbjct: 360 IDDDVDFCLKLAKEESVMVLPGIAVGMKNWLRITFAIEPSALEVGFERLKVFCQRHAKQ 418

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147844187|emb|CAN80557.1| hypothetical protein VITISV_034250 [Vitis vinifera]

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 265/424 (62%), Positives = 331/424 (78%), Gaps = 5/424 (1%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRT 60
           MENGA  +WGF   Q    A ++TV+  L  +I ++N  D RPV+ LG GDP+AF  FRT
Sbjct: 1   MENGAAERWGFRGNQVLHKASSITVRGVLGKVISNLNPQDRRPVITLGQGDPSAFSSFRT 60

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
           + EAE+AIVDAVRS KFN Y+ + G+   RRAIA+YLS DLPYKLS DDVY+T+GC QA+
Sbjct: 61  SPEAEEAIVDAVRSRKFNSYSPDVGVLTXRRAIAEYLSADLPYKLSPDDVYLTIGCAQAI 120

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           ++I+ VLA PGAN+LLPRPG+  YE  A    +E R FDLLPE+ WEVDL+ V+ALAD+N
Sbjct: 121 KLIIKVLALPGANILLPRPGYALYEAHAAANHLEFRRFDLLPEKGWEVDLEGVKALADEN 180

Query: 181 TAAMVIINPGNPCGNVFTYHHLQ-----EIAEMARKLRVMVVADEVYGHLTFGSIPYTPM 235
           T AMVIINPGNPCGNVFT+ HL+     ++AE AR L ++V+ADEVYGHL FGS PY PM
Sbjct: 181 TVAMVIINPGNPCGNVFTHQHLKKLGILQVAETARMLGILVIADEVYGHLVFGSNPYVPM 240

Query: 236 GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF 295
           G+FGSI PVITLGSISKRW+VPGWR GWLVTNDPNGI  KSG++++I   L+I +D  TF
Sbjct: 241 GVFGSITPVITLGSISKRWIVPGWRLGWLVTNDPNGILCKSGVVETIVSSLNICTDPATF 300

Query: 296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPW 355
           I GA+PQI+EKT +DFF ++I  LR++A+IC+DG+ +IPCI+CP+KPEG+M  MV LN  
Sbjct: 301 IXGAVPQIIEKTTDDFFSRIIGLLRKTADICFDGLADIPCITCPHKPEGAMSVMVNLNVS 360

Query: 356 LLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
           LLEDI DD++F +KL+KEESVI+ PG  VG+KNWLRI F  E  +L+DGLGR+KAFCQRH
Sbjct: 361 LLEDIEDDMDFCVKLSKEESVIILPGFTVGMKNWLRITFATEXPSLEDGLGRIKAFCQRH 420

Query: 416 TKKH 419
            KK 
Sbjct: 421 AKKQ 424

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	419
TAIR|locus:2154714	414	TAT7 "tyrosine aminotransferas	0.942	0.954	0.567	8e-124
UNIPROTKB|Q9ST02	461	naat-A "Nicotianamine aminotra	0.918	0.835	0.564	5.7e-123
UNIPROTKB|Q9ST03	551	naat-B "Nicotianamine aminotra	0.983	0.747	0.531	5.7e-123
TAIR|locus:2158926	420	AT5G36160 [Arabidopsis thalian	0.990	0.988	0.531	6.5e-122
TAIR|locus:2046056	462	SUR1 "SUPERROOT 1" [Arabidopsi	0.992	0.900	0.475	5.8e-114
TAIR|locus:2121407	449	AT4G28420 [Arabidopsis thalian	0.978	0.913	0.485	1.4e-112
TAIR|locus:2121382	447	AT4G28410 [Arabidopsis thalian	0.976	0.914	0.476	6.1e-110
TAIR|locus:2047441	445	TAT3 "tyrosine aminotransferas	0.983	0.925	0.460	7.7e-103
TAIR|locus:2128434	424	AT4G23590 [Arabidopsis thalian	0.816	0.806	0.502	3.1e-90
TAIR|locus:2128459	422	CORI3 "CORONATINE INDUCED 1" [	0.961	0.954	0.439	5.9e-89

TAIR|locus:2154714 TAT7 "tyrosine aminotransferase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
 Identities = 226/398 (56%), Positives = 293/398 (73%)

Query:    23 VTVKTSLASIIDSVNKNDP---RPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNC 79
             +T+K  L+ +++S+   +    + V+ LG GDPT + CFRT             S KF+ 
Sbjct:    11 ITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQAVSDSLLSNKFHG 70

Query:    80 YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
             Y+   G+P ARRAIA+YLSRDLPYKLS DDV++T GC QA++V LS+LARP AN+LLPRP
Sbjct:    71 YSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSMLARPRANILLPRP 130

Query:   140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
             G+P YE  A+ + +EVR+ DLLPE  WE+DLDAVEALAD+NT A+V+INPGNPCGNV++Y
Sbjct:   131 GFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVINPGNPCGNVYSY 190

Query:   200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259
              HL +IAE A+KL  +V+ADEVYGHL FGS P+ PMG+FGSIVPV+TLGS+SKRW+VPGW
Sbjct:   191 QHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRWIVPGW 250

Query:   260 RFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319
             R GW VT DP+G F+   II+  K    I     TFIQ A+P ILE+T E FF K +++L
Sbjct:   251 RLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAVPTILEQTDESFFKKTLNSL 310

Query:   320 RESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379
             + S++IC D +KEIPCI   ++PEGSM  MVKLN  LLED++DDI+F  KLA+EESVI+ 
Sbjct:   311 KNSSDICCDWIKEIPCIDSSHRPEGSMAMMVKLNLSLLEDVSDDIDFCFKLAREESVILL 370

Query:   380 PGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
             PG  VGLKNWLRI F A+ +++++   R+K F  RH K
Sbjct:   371 PGTAVGLKNWLRITFAADATSIEEAFKRIKCFYLRHAK 408

GO:0005737 "cytoplasm" evidence=ISM

GO:0008483 "transaminase activity" evidence=ISS

GO:0009058 "biosynthetic process" evidence=ISS

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IGI;IMP;IDA;TAS

GO:0010189 "vitamin E biosynthetic process" evidence=IEP;IMP

UNIPROTKB|Q9ST02 naat-A "Nicotianamine aminotransferase A" [Hordeum vulgare (taxid:4513)]

 Score = 1209 (430.6 bits), Expect = 5.7e-123, P = 5.7e-123
 Identities = 218/386 (56%), Positives = 296/386 (76%)

Query:    35 SVNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIA 94
             SV ++ PRPV+PL +GDP+ FP FRT            R+G+FNCYA   G+P AR A+A
Sbjct:    71 SVEESGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAALRTGQFNCYAAGVGLPAARSAVA 130

Query:    95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP-GANVLLPRPGWPYYEGIAQRKQV 153
             ++LS+ +PYKLSADDV++T G  QA+EVI+ VLA+  GAN+LLPRPG+P YE  A   ++
Sbjct:   131 EHLSQGVPYKLSADDVFLTAGGTQAIEVIIPVLAQTAGANILLPRPGYPNYEARAAFNKL 190

Query:   154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR 213
             EVRHFDL+P++ WE+D+D++E++ADKNT AMVIINP NPCG+V++Y HL ++AE+ARKL 
Sbjct:   191 EVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPNNPCGSVYSYDHLAKVAEVARKLG 250

Query:   214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF 273
             ++V+ADEVYG L  GS P+ PMG+FG I PV+++GS+SK W+VPGWR GW+   DP  I 
Sbjct:   251 ILVIADEVYGKLVLGSAPFIPMGVFGHIAPVLSIGSLSKSWIVPGWRLGWVAVYDPTKIL 310

Query:   274 QKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333
             +K+ I  SI + L++ +D  TF+Q A+P+ILE TK DFF ++I  L+ES+EICY  +KE 
Sbjct:   311 EKTKISTSITNYLNVSTDPATFVQEALPKILENTKADFFKRIIGLLKESSEICYREIKEN 370

Query:   334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA 393
               I+CP+KPEGSM  MVKLN  LLE+I+DDI+F  KLAKEESVI+ PG  +G++NW+RI 
Sbjct:   371 KYITCPHKPEGSMFVMVKLNLHLLEEIHDDIDFCCKLAKEESVILCPGSVLGMENWVRIT 430

Query:   394 FCAEPSALKDGLGRMKAFCQRHTKKH 419
             F   PS+L+DGL R+K+FCQR+ KK+
Sbjct:   431 FACVPSSLQDGLERVKSFCQRNKKKN 456

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

UNIPROTKB|Q9ST03 naat-B "Nicotianamine aminotransferase B" [Hordeum vulgare (taxid:4513)]

 Score = 1209 (430.6 bits), Expect = 5.7e-123, P = 5.7e-123
 Identities = 221/416 (53%), Positives = 304/416 (73%)

Query:     8 KWGFEDKQEHKAAPA---VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTXXXX 64
             +W F   ++   A     ++++     I  SV +  PRPV+PL +GDP+ FP FRT    
Sbjct:   131 EWNFAGAKDGVLAATGANMSIRAIRYKISASVQEKGPRPVLPLAHGDPSVFPAFRTAVEA 190

Query:    65 XXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVIL 124
                     R+G+FNCY    G+P AR A+A++LS+ +PY LSADDV++T G  QA+EVI+
Sbjct:   191 EDAVAAAVRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVII 250

Query:   125 SVLARP-GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183
              VLA+  GAN+LLPRPG+P YE  A   ++EVRHFDL+P++ WE+D+D++E++ADKNT A
Sbjct:   251 PVLAQTAGANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTA 310

Query:   184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP 243
             MVIINP NPCG+V++Y HL ++AE+A++L ++V+ADEVYG L  GS P+ PMG+FG I P
Sbjct:   311 MVIINPNNPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITP 370

Query:   244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQI 303
             V+++GS+SK W+VPGWR GW+   DP  I Q++ I  SI + L++ +D  TFIQ A+PQI
Sbjct:   371 VLSIGSLSKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAALPQI 430

Query:   304 LEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDD 363
             LE TKEDFF  +I  L+ES+EICY  +KE   I+CP+KPEGSM  MVKLN  LLE+I+DD
Sbjct:   431 LENTKEDFFKAIIGLLKESSEICYKQIKENKYITCPHKPEGSMFVMVKLNLHLLEEIDDD 490

Query:   364 IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
             I+F  KLAKEESVI+ PG  +G+ NW+RI F   PS+L+DGLGR+K+FCQR+ K++
Sbjct:   491 IDFCCKLAKEESVILCPGSVLGMANWVRITFACVPSSLQDGLGRIKSFCQRNKKRN 546

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

TAIR|locus:2158926 AT5G36160 [Arabidopsis thaliana (taxid:3702)]

 Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
 Identities = 221/416 (53%), Positives = 303/416 (72%)

Query:     2 ENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTX 61
             ENGA+ +W F   +  + + ++T++  L ++I+ ++  D RPV+PLG+GDP+ FP FRT 
Sbjct:     3 ENGAK-RWNFGANEVVERSNSLTIRDYLNTLINCLDGGDVRPVIPLGHGDPSPFPSFRTD 61

Query:    62 XXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121
                        RS KFN Y+++SG+P AR+A+A+YLS DL Y++S +DV++T GC QA+E
Sbjct:    62 QAAVEAICDAVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQAIE 121

Query:   122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT 181
             +++S LA PGAN+LLPRP +P Y+  A   Q+EVR+FDLLPE  W+VDLD VEALAD  T
Sbjct:   122 ILISALAIPGANILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADDKT 181

Query:   182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241
              A+++INP NPCGNVF+  HLQ+IAE A KL ++V+ADEVY H  FG  P+  M  F  +
Sbjct:   182 VAILVINPCNPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAEL 241

Query:   242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIP 301
             VPVI LG+ISKRW VPGWR GW+VT DP+GI + SG + ++ + +++ +D  TFIQGA+P
Sbjct:   242 VPVIVLGAISKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQGAMP 301

Query:   302 QILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN 361
              I+  TKE+FF   ++ +++ AEICY+ + +IPCI+CP KPEGSM TMVKLN  LLEDI+
Sbjct:   302 DIIGNTKEEFFSSKLEMVKKCAEICYEELMKIPCITCPCKPEGSMFTMVKLNFSLLEDIS 361

Query:   362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
             DD++F  KLAKEES+I+ PG  VGLKNWLRI F  E   L +G  R+K F +RH+K
Sbjct:   362 DDLDFCSKLAKEESMIILPGQAVGLKNWLRITFAVELELLIEGFSRLKNFTERHSK 417

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IDA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IGI

GO:0006572 "tyrosine catabolic process" evidence=IGI

TAIR|locus:2046056 SUR1 "SUPERROOT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
 Identities = 198/416 (47%), Positives = 281/416 (67%)

Query:     3 NGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTXX 62
             NG  + W F    +   A  VT++  +  + D+  K+  + ++PLG+GDP+ +PCFRT  
Sbjct:    27 NGQSSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCI 86

Query:    63 XXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122
                       RSGK N Y   +GI PARRA+ADY++RDLP+KL+ +D+++T GC Q +E+
Sbjct:    87 EAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEI 146

Query:   123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
             +   LARP AN+LLPRPG+P+Y+  A    +EVR FDLLPE+ WE+DL+ +EA+AD+NT 
Sbjct:   147 VFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTV 206

Query:   183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV 242
             AMV+INP NPCGNV+++ HL+++AE ARKL +MV++DEVY    FG  P+  MG F SIV
Sbjct:   207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIV 266

Query:   243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQ 302
             PV+TL  ISK W+VPGW+ GW+  NDP G+F+ + ++ SIK  L +  D  T IQ A+P 
Sbjct:   267 PVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPA 326

Query:   303 ILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIND 362
             ILEK  ++FF K    L+ + ++  D +K+IPC+ CP KPE     + KL   L+++I D
Sbjct:   327 ILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKD 386

Query:   363 DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
             DI+F +KLA+EE+++  PG  +GLKNW+RI    E   L+D L R+K FC RH KK
Sbjct:   387 DIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;RCA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0016846 "carbon-sulfur lyase activity" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA;IMP

GO:0080108 "S-alkylthiohydroximate lyase activity" evidence=IMP

GO:0001560 "regulation of cell growth by extracellular stimulus" evidence=IMP

GO:0048830 "adventitious root development" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=IMP;RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019760 "glucosinolate metabolic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TAIR|locus:2121407 AT4G28420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
 Identities = 199/410 (48%), Positives = 275/410 (67%)

Query:     9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXX 68
             W F        A +VT++  +  + D  + +  +P++PL +GDP+ +PC+RT        
Sbjct:    27 WRFRGSDNAAKASSVTMRVIVYKLFDECSLDVKKPLLPLAHGDPSVYPCYRTSILVENAV 86

Query:    69 XXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA 128
                 RSGK N Y   +GI PAR+A+ADY++RDL  K+  +DV++T+GC Q +EV+L  LA
Sbjct:    87 VDVLRSGKGNSYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSLA 146

Query:   129 RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188
             RP AN+LLPRP +P+YE  A    +EVR FDLLPE+ WE+DL  +EA+AD+NT AMVIIN
Sbjct:   147 RPNANILLPRPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVIIN 206

Query:   189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG 248
             P NPCGNV++Y HL+++AE A+KL +MV+ DEVY    FG  P+ PMG F SI PVITLG
Sbjct:   207 PNNPCGNVYSYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITLG 266

Query:   249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK 308
              ISK W+VPGWR GW+  NDP GI + +G++ SI+  L I  D  T +Q A+P+IL K  
Sbjct:   267 GISKGWIVPGWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQAALPEILGKAN 326

Query:   309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFAL 368
             ++ F K    L+++ E+  D +KEIPC+ C  KPE     + KL   LLEDI DD++F +
Sbjct:   327 KELFAKKNSMLKQNVELVCDRLKEIPCLVCNKKPESCTYLLTKLKLPLLEDIEDDMDFCM 386

Query:   369 KLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
             KLAKEE++++ PG+ +GLKNW+RI    E   L+D L R+  FC+RH KK
Sbjct:   387 KLAKEENLVLLPGVALGLKNWIRITIGVEAQMLEDALERLNGFCKRHLKK 436

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2121382 AT4G28410 [Arabidopsis thaliana (taxid:3702)]

 Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
 Identities = 195/409 (47%), Positives = 282/409 (68%)

Query:     9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXX 68
             W F+  +  K A +V++K +LA + D  +K+  + ++PLG+GDP+ +PCF+T        
Sbjct:    35 WRFKGNKAAKEAASVSMKGTLARLFDCCSKDVKKTILPLGHGDPSVYPCFQTSVDAEEAV 94

Query:    69 XXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA 128
                 RSG  N YA   GI PARRA+A+YL+RDLP+K+ +DD+++T+GC Q +E ++  LA
Sbjct:    95 VESLRSGAANSYAPGVGILPARRAVANYLNRDLPHKIHSDDIFMTVGCCQGIETMIHALA 154

Query:   129 RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188
              P AN+LLP   +P Y   A    VE+R ++LLP+ +WE+DL  VEA+AD+NT A+VI+N
Sbjct:   155 GPKANILLPTLIYPLYNSHAIHSLVEIRKYNLLPDLDWEIDLQGVEAMADENTIAVVIMN 214

Query:   189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG 248
             P NPCGNV+TY HL+++AE+ARKL +MV++DEVY    +G   + PMG+F SI PV+TLG
Sbjct:   215 PHNPCGNVYTYEHLKKVAEVARKLGIMVISDEVYNQTIYGENKFVPMGIFSSITPVVTLG 274

Query:   249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK 308
             SISK WLVPGWR GW+  NDP  +F+ + +++SIK+ L I  D  T +Q A+P ILEKTK
Sbjct:   275 SISKGWLVPGWRIGWIAMNDPKNVFKTTRVVESIKEHLDISPDPSTILQFALPNILEKTK 334

Query:   309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFAL 368
             ++FF K    L ++ +  +D +K+IPC++CP KPE     + KL+  LLEDI +D +F +
Sbjct:   335 KEFFEKNNSILSQNVDFAFDALKDIPCLTCPKKPESCTYLVTKLDLSLLEDITNDFDFCM 394

Query:   369 KLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
             KLA+EE+++  PG  +GLKNW+R +   E S L+D   R+K F  RHTK
Sbjct:   395 KLAQEENLVFLPGEVLGLKNWVRFSIGVERSMLEDAFMRLKGFFARHTK 443

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2047441 TAT3 "tyrosine aminotransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
 Identities = 191/415 (46%), Positives = 272/415 (65%)

Query:     3 NGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTXX 62
             N   N W F+       A AVT++     +  +   N  + ++    G+P+A   FRT  
Sbjct:    10 NANANVWRFKGNGATSDAAAVTLRKLAFGMFKNCTMNSGKTILFPTPGEPSAHSNFRTCP 69

Query:    63 XXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122
                       RSG  N YA + G+  ARRA+A+YL+ +LP KL A+DVY+T GC QA+E+
Sbjct:    70 EAEEAVAAAARSGMANSYAPSPGVFKARRAVAEYLNGELPTKLKAEDVYITGGCNQAIEI 129

Query:   123 ILSVLA-RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT 181
             ++  LA  P AN+LLPRPG+P+Y+  A    +E+R +DLLPE +WE++LD +EA AD+NT
Sbjct:   130 VIDSLAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDLLPESDWEINLDGLEAAADENT 189

Query:   182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241
              AMVIINP NPCGNV+TY HL ++AEMARKL +M+++DEVY H+ +G  P+ PMG F SI
Sbjct:   190 VAMVIINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDEVYDHVVYGDKPFIPMGKFASI 249

Query:   242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFI-QGAI 300
              PVITLGSISK W+ PGWR GW+  NDPNGIF  +G++ +I+D L +    P+FI Q A+
Sbjct:   250 APVITLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQAIEDFLDLTPQ-PSFILQEAL 308

Query:   301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
             P ILEKT ++FF K I  +R + E+  + +K+IPC+ CP KPE      +KL+  +L +I
Sbjct:   309 PDILEKTPKEFFEKKIKAMRRNVELSCERLKDIPCLFCPKKPESCSYLWLKLDTSMLNNI 368

Query:   361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
              +D +F  KL  EES+I+ PG+ +G +NW+RI+   + S +++   R+K F  RH
Sbjct:   369 KNDFDFCTKLVSEESLILIPGVALGAENWVRISIGTDESVVQEIFDRLKGFYDRH 423

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=ISS

TAIR|locus:2128434 AT4G23590 [Arabidopsis thaliana (taxid:3702)]

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 172/342 (50%), Positives = 238/342 (69%)

Query:    75 GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134
             G  N YA + G+P A+RA+A+YL+RDL  KL+ DDVY+T+GCKQA+E+ +S+LA+P AN+
Sbjct:    68 GTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQAIELAVSILAKPKANI 127

Query:   135 LLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCG 194
             LLPRPG+P+    +  K +EVR ++ +PER++E+D ++V  + D+NT A+ IINP NP G
Sbjct:   128 LLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVDENTFAIFIINPHNPNG 187

Query:   195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW 254
             N +T  HL+++A +AR+L +MVV+DEVY    FGS P+ PMG F SIVPVITLGSISK W
Sbjct:   188 NYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKFSSIVPVITLGSISKGW 247

Query:   255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCK 314
             +VPGWR GWL  +D NG+F+ + ++ + K+ L I S  PT IQ AIP ILEKT +DFF K
Sbjct:   248 IVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQAAIPTILEKTPQDFFEK 307

Query:   315 LIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374
                 L++  +  Y  +K IP ++C  KPE       KL+P    DI DD +F  KLAKEE
Sbjct:   308 RGIFLKDKVDFGYSKLKNIPTLTCYMKPESCTFLWTKLDPLHFVDIEDDHDFCRKLAKEE 367

Query:   375 SVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416
             +++V PGI  G  NWLR +   E   L+D   R+K+FC+RH+
Sbjct:   368 NLVVLPGIAFGQNNWLRHSIDMETPRLEDAFERLKSFCERHS 409

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2128459 CORI3 "CORONATINE INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
 Identities = 180/410 (43%), Positives = 259/410 (63%)

Query:     9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXX 68
             W F   +  K A A ++  S  S + ++     +P++P     P       T        
Sbjct:     9 WQFSGSEAAKDAAAASLG-SYTSALYALCDPHGKPILP-----PRN-EILETSNTAEKAV 61

Query:    69 XXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA 128
                   G  N YA + G+  A+ A+A+YL++ LP KL+ADDV++TLGCKQA+E+ + +LA
Sbjct:    62 VKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKLTADDVFMTLGCKQAIELAVDILA 121

Query:   129 RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188
             +P ANVLLP PG+P+    +  K +EVRH++ LPE+N+E+D D+V AL D+NT A+ IIN
Sbjct:   122 KPKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEKNFEIDFDSVRALVDENTFAIFIIN 181

Query:   189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG 248
             P NP GN ++  HL+++AE+A++L++MVV+DEV+    FGS P+ PMG F SIVPV+TLG
Sbjct:   182 PHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRWTLFGSNPFVPMGKFSSIVPVVTLG 241

Query:   249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK 308
             SISK W VPGWR GWL  +D +G+F+ + ++ + +D L I ++ PT IQ AIP ILEKT 
Sbjct:   242 SISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQDFLQINNNPPTVIQAAIPDILEKTP 301

Query:   309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFAL 368
             ++FF K    L++  E  Y  +K IP ++C  KPE       +L+     DI DD +F  
Sbjct:   302 QEFFDKRQSFLKDKVEFGYSKLKYIPSLTCYMKPEACTFLWTELDLSSFVDIEDDQDFCN 361

Query:   369 KLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
             KLAKEE+++V PGI    KNWLR +   E   L+D L R+K+FC RH+ K
Sbjct:   362 KLAKEENLVVLPGIAFSQKNWLRHSIDMETPVLEDALERLKSFCDRHSNK 411

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IEP

GO:0008483 "transaminase activity" evidence=IEA;ISS;NAS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0010188 "response to microbial phytotoxin" evidence=IEP

GO:0004021 "L-alanine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004121 "cystathionine beta-lyase activity" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=TAS

GO:0050362 "L-tryptophan:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ST02	NAATA_HORVU	2, ., 6, ., 1, ., 8, 0	0.5835	0.9260	0.8416	N/A	no
Q8QZR1	ATTY_MOUSE	2, ., 6, ., 1, ., 5	0.3680	0.9045	0.8348	yes	no
Q54K95	ATTY_DICDI	2, ., 6, ., 1, ., 5	0.3246	0.9785	0.9832	yes	no
Q9FN30	TAT2_ARATH	2, ., 6, ., 1, ., -	0.5521	0.9713	0.9830	yes	no
P17735	ATTY_HUMAN	2, ., 6, ., 1, ., 5	0.3604	0.9045	0.8348	yes	no
P04694	ATTY_RAT	2, ., 6, ., 1, ., 5	0.3629	0.9045	0.8348	yes	no
Q58CZ9	ATTY_BOVIN	2, ., 6, ., 1, ., 5	0.3604	0.9045	0.8478	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	419
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	0.0
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	0.0
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	0.0
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	0.0
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	1e-159
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	1e-112
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	2e-87
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	2e-79
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	2e-73
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	5e-58
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	4e-49
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	7e-44
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	1e-43
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	1e-36
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	1e-33
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	3e-33
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	1e-32
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	1e-32
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	1e-30
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	2e-30
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	6e-29
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	5e-28
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	2e-26
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	2e-25
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	6e-25
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	5e-24
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	6e-24
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	2e-23
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	3e-23
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	2e-22
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	4e-22
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	1e-21
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	2e-20
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	3e-20
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	6e-20
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	7e-20
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	4e-19
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	5e-19
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	9e-19
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	1e-18
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	1e-18
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	2e-18
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	5e-17
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	7e-17
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	3e-16
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	3e-16
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	6e-16
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	8e-16
PLN02368	407	PLN02368, PLN02368, alanine transaminase	8e-16
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	2e-15
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	9e-15
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	5e-14
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	7e-14
PLN02231	534	PLN02231, PLN02231, alanine transaminase	3e-13
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	8e-13
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	1e-12
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	2e-12
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	7e-12
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	3e-11
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	4e-11
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	1e-10
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	3e-10
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	3e-10
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	1e-09
PRK08636	403	PRK08636, PRK08636, aspartate aminotransferase; Pr	4e-09
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	4e-09
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	7e-09
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	9e-09
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	2e-08
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	2e-08
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	3e-08
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	1e-07
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	2e-07
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	4e-07
PLN02450	468	PLN02450, PLN02450, 1-aminocyclopropane-1-carboxyl	9e-07
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	1e-06
pfam01053	382	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP	1e-06
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	1e-06
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	2e-06
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	2e-06
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	2e-06
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	2e-06
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	3e-06
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	3e-06
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	3e-06
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	3e-06
cd00614	369	cd00614, CGS_like, CGS_like: Cystathionine gamma-s	2e-05
PRK07366	388	PRK07366, PRK07366, succinyldiaminopimelate transa	3e-05
pfam00266	370	pfam00266, Aminotran_5, Aminotransferase class-V	9e-05
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	1e-04
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	3e-04
PRK00451	447	PRK00451, PRK00451, glycine dehydrogenase subunit	3e-04
PRK02610	374	PRK02610, PRK02610, histidinol-phosphate aminotran	4e-04
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	5e-04
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	8e-04
pfam01212	288	pfam01212, Beta_elim_lyase, Beta-eliminating lyase	0.001
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	0.002
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	0.003

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  645 bits (1666), Expect = 0.0
 Identities = 256/428 (59%), Positives = 328/428 (76%), Gaps = 10/428 (2%)

Query: 1   MENGAEN--------KWGFEDKQEH-KAAPAVTVKTSLASIIDSVNKND-PRPVVPLGYG 50
           ME G           +W FE       AA A++++  L  +   V+    PRPV+PLG+G
Sbjct: 1   MEGGGGGGGGGHATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHG 60

Query: 51  DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDV 110
           DP+AFPCFRTA EAEDA+  A+RSGK+N Y+T  G+ PARRAIA+YLSRDLPY+LS DD+
Sbjct: 61  DPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDI 120

Query: 111 YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170
           Y+T GC QA+E+I+SVLA+PGAN+LLPRPG+P YE  A    +EVRHFDLLPER WEVDL
Sbjct: 121 YLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDL 180

Query: 171 DAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI 230
           + VEALAD+NT AMVIINP NPCG+V++Y HL +IAE ARKL ++V+ADEVY HLTFGS 
Sbjct: 181 EGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK 240

Query: 231 PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYS 290
           P+ PMG+FG + PV+TLGSISKRW+VPGWR GW+ T DPNGI +++ ++DSI++ L+I +
Sbjct: 241 PFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNIST 300

Query: 291 DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV 350
           D  TF+QGAIPQI+  TKE+FF K +  L+E+A+ICY+ +KEI CI+CP+KPEGSM  MV
Sbjct: 301 DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMV 360

Query: 351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA 410
           KL+   L  I DD++F  KLAKEESV+V PG  +G+KNWLRI F  +P +L+DGL R+K+
Sbjct: 361 KLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKS 420

Query: 411 FCQRHTKK 418
           FC RH K 
Sbjct: 421 FCLRHAKL 428

Length = 430

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  592 bits (1527), Expect = 0.0
 Identities = 255/399 (63%), Positives = 308/399 (77%)

Query: 21  PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY 80
           P+ ++  ++  + ++ N++D R  +  G+GDP+ F CFRT   AEDAIV+AVRS KFN Y
Sbjct: 11  PSYSIDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSY 70

Query: 81  ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG 140
           A   GI PARRAIADYLS DLPY+LS DDVY+TLGCK A E+I+ VLARP AN+LLPRPG
Sbjct: 71  APTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPG 130

Query: 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200
           +P  E  A    +E+RHFDLLPE+ WEVDLDAVEA+AD+NT AMVIINPGNPCG+V++Y 
Sbjct: 131 FPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYE 190

Query: 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260
           HL +IAE ARKL ++V+ADEVYGH+ FGS P+ PMGLF SIVPVITLGSISKRW++PGW 
Sbjct: 191 HLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWG 250

Query: 261 FGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLR 320
            GWLVT DP+G+ Q   I DSIK  L+     PTFIQ AIP+ILEKT EDFF K I+ LR
Sbjct: 251 LGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILR 310

Query: 321 ESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP 380
            +   CYD +KEIPCI CP K EG+   +VKLN  LLEDI DD+EF LKLAKEES+I+ P
Sbjct: 311 AALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILP 370

Query: 381 GIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           G+ VGLKNWLRI F  E S+L+DGLGR+K+FC RH KK 
Sbjct: 371 GVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKKP 409

Length = 409

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score =  571 bits (1474), Expect = 0.0
 Identities = 251/418 (60%), Positives = 323/418 (77%), Gaps = 13/418 (3%)

Query: 1   MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSV-NKNDPRPVVPLGYGDPTAFPCFR 59
           MENGA+                +T+K  L+ +++S+ ++ + + V+ LG GDPTA+ CF 
Sbjct: 1   MENGADT------------TKTITIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFH 48

Query: 60  TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119
           T   A++A+VDA++S KFN YA   G+P ARRAIA+YLSRDLPYKLS DDV++T GC QA
Sbjct: 49  TTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108

Query: 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK 179
           ++V LS+LARPGAN+LLPRPG+P YE  A  + +EVR+ DLLPE+ WEVDLDAVEALAD+
Sbjct: 109 IDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ 168

Query: 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239
           NT A+VIINPGNPCGNV++Y HL++IAE A KL+++V+ADEVYGHL FGS P+ PMG+FG
Sbjct: 169 NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFG 228

Query: 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299
           SIVPV+TLGS+SKRW+VPGWR GW VT DP+G F+   I++ IK    I     TFIQ A
Sbjct: 229 SIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAA 288

Query: 300 IPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359
           +P ILE+T E FF K I+ L++S++IC D +KEIPCI+CP+KPEGSM  MVKLN  LLED
Sbjct: 289 VPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLED 348

Query: 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
           I+DDI+F  KLA+EESVI+ PG  VGLKNWLRI F A+PS+L++ LGR+K+F  RH+K
Sbjct: 349 ISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSK 406

Length = 409

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score =  546 bits (1410), Expect = 0.0
 Identities = 201/391 (51%), Positives = 278/391 (71%), Gaps = 4/391 (1%)

Query: 27  TSLASIIDS--VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNS 84
             + +I+D+  V  N  +PV+PL +GDP+ F   RT  EAE+A+ DA+RSGKFN YA + 
Sbjct: 14  NPIRAIVDNLKVKPNPEKPVIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSV 73

Query: 85  GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY 144
           G   AR A+A+YLS DLP KL+ADDV +T GC QA+E+ +  LA PGAN+L+PRPG+P Y
Sbjct: 74  GALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLY 133

Query: 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204
           +  A    +EVR +DLLPE++WE+DLD +E+LAD+ T A+V+INP NPCG+VF+  HLQ+
Sbjct: 134 DTRAAFSGLEVRLYDLLPEKDWEIDLDGLESLADEKTVAIVVINPSNPCGSVFSRDHLQK 193

Query: 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264
           IAE+A KL + ++ADE+YGH+ FG  P+ PM  F SIVPV++LG ISKRW+VPGWR GW+
Sbjct: 194 IAEVAEKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWI 253

Query: 265 VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324
           + +DP+GIF+ + ++  +K+ L       T +QGA+P ILE T ++FF   I  L+ +AE
Sbjct: 254 IIHDPHGIFRDT-VLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAE 312

Query: 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV 384
           +CY+ +K+IP + CP KPEG+M  MVKL   L  +I DD++F  KLA+EESVI  PG   
Sbjct: 313 LCYEELKDIPGLVCP-KPEGAMYLMVKLELELFPEIKDDVDFCEKLAREESVICLPGSAF 371

Query: 385 GLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
           GL NW+RI      S L++   R+K FC+RH
Sbjct: 372 GLPNWVRITITVPESMLEEACSRIKEFCERH 402

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score =  456 bits (1175), Expect = e-159
 Identities = 205/416 (49%), Positives = 291/416 (69%)

Query: 3   NGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAV 62
           NG  + W F    +   A  VT++  +  + D+  K+  + ++PLG+GDP+ +PCFRT +
Sbjct: 27  NGQSSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCI 86

Query: 63  EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122
           EAEDA+VD +RSGK N Y   +GI PARRA+ADY++RDLP+KL+ +D+++T GC Q +E+
Sbjct: 87  EAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEI 146

Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
           +   LARP AN+LLPRPG+P+Y+  A    +EVR FDLLPE+ WE+DL+ +EA+AD+NT 
Sbjct: 147 VFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTV 206

Query: 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV 242
           AMV+INP NPCGNV+++ HL+++AE ARKL +MV++DEVY    FG  P+  MG F SIV
Sbjct: 207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIV 266

Query: 243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQ 302
           PV+TL  ISK W+VPGW+ GW+  NDP G+F+ + ++ SIK  L +  D  T IQ A+P 
Sbjct: 267 PVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPA 326

Query: 303 ILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIND 362
           ILEK  ++FF K    L+ + ++  D +K+IPC+ CP KPE     + KL   L+++I D
Sbjct: 327 ILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKD 386

Query: 363 DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
           DI+F +KLA+EE+++  PG  +GLKNW+RI    E   L+D L R+K FC RH KK
Sbjct: 387 DIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442

Length = 462

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score =  333 bits (856), Expect = e-112
 Identities = 140/387 (36%), Positives = 222/387 (57%), Gaps = 6/387 (1%)

Query: 31  SIIDS--VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP 88
           +I+D+  V  N  +PV+ L  GDPT F    T  E   A+ D++ SGK+N YA   G   
Sbjct: 18  AIVDNMKVKPNPEKPVIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALS 77

Query: 89  ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA 148
           AR AIA Y   +    + ADDV +  GC  A+E+ ++ LA  G N+L+PRPG+P Y  +A
Sbjct: 78  AREAIASY-YHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYRTLA 136

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
           +   +EV+ ++LLP+++WE+DL  +E+L D+ TAA+V+ NP NPCG+VF+  HL+EI  +
Sbjct: 137 ESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAV 196

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
           A +  + ++ADE+YG + F    + P+    S VP+++ G ++KRWLVPGWR GW++ +D
Sbjct: 197 AERQCLPIIADEIYGDMVFSGATFEPVASLSSNVPILSCGGLAKRWLVPGWRLGWIIIHD 256

Query: 269 PNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328
             GI     I D +           T +QGA+P IL +T +++F   +  L  +A +CY 
Sbjct: 257 RRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYG 314

Query: 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKN 388
            +  +P +  P  P G+M  MV +      +  +D+EF  +L  E+SV   PG       
Sbjct: 315 ALAAVPGLQ-PVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLIAEQSVFCLPGSCFEYPG 373

Query: 389 WLRIAFCAEPSALKDGLGRMKAFCQRH 415
           + R+        +++   R++ FC+RH
Sbjct: 374 FFRVVLTVPVVMMEEACSRIQEFCERH 400

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score =  271 bits (694), Expect = 2e-87
 Identities = 124/383 (32%), Positives = 204/383 (53%), Gaps = 9/383 (2%)

Query: 41  PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100
           P+ ++ L  GDPT      T      A+V+AV S + N Y    G P AR A+A Y    
Sbjct: 32  PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNS 91

Query: 101 LPYK------LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE 154
             +K      +  D+V +  G   A+ + L+ L   G N+L+P PG+P+YE + +   +E
Sbjct: 92  FVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIE 151

Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +R ++  PE++WE DLD +  L D  T A+++ NP NPCG+ F+  H+++I  +  +LR+
Sbjct: 152 MRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRL 211

Query: 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
            +++DE+Y  + F    +T +  F + VP + LG  +K  +VPGWR GWL+  DP+G   
Sbjct: 212 PLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGG 271

Query: 275 KSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334
               +D +K    +     + +Q A+ + L  T ++   +++  L E A + Y+ + E  
Sbjct: 272 D--FLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECI 329

Query: 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF 394
            +S    P GSM  M +L+     DI  D+EF  KL +EE+V V PG    +  + R+  
Sbjct: 330 GLSP-TMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTI 388

Query: 395 CAEPSALKDGLGRMKAFCQRHTK 417
                 L++ + R+KAFC+RH K
Sbjct: 389 SRPVEVLREAVERIKAFCERHKK 411

Length = 412

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  248 bits (636), Expect = 2e-79
 Identities = 101/369 (27%), Positives = 167/369 (45%), Gaps = 22/369 (5%)

Query: 45  VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK 104
           + L  G+P     F    E  +A+  A        Y  + G+P  R AIA++L R     
Sbjct: 1   IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVD 56

Query: 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER 164
           +  +++ VT G ++A+ ++L  L  PG  VL+P P +P YE  A+    EV    L  E 
Sbjct: 57  VPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEG 116

Query: 165 NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224
            + +DL+ +EA     T  + + NP NP G V +   L+E+AE+A+K  +++++DE Y  
Sbjct: 117 GFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAE 176

Query: 225 LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284
           L +   P   + L  +   VI L S SK + +PG R G+L+            +++ +K 
Sbjct: 177 LVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------ELLERLKK 229

Query: 285 -CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE 343
                 S   T  Q A    L    E+   +L +  R   +   + +KE+  +    KP 
Sbjct: 230 LLPYTTSGPSTLSQAAAAAAL-DDGEEHLEELRERYRRRRDALLEALKELGPLVV-VKPS 287

Query: 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSAL 401
           G     + L         DD EF  +L  E  V+V PG   G   + ++R++F      L
Sbjct: 288 GGFFLWLDLPE------GDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEEL 341

Query: 402 KDGLGRMKA 410
           ++ L R+  
Sbjct: 342 EEALERLAE 350

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  234 bits (599), Expect = 2e-73
 Identities = 107/383 (27%), Positives = 179/383 (46%), Gaps = 27/383 (7%)

Query: 41  PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100
              V+ L  G+P     F T     +A ++A+  G  + Y  ++GIP  R AIA+   R 
Sbjct: 27  KEDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGTH-YTPSAGIPELREAIAEKYKRR 81

Query: 101 LPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD 159
               +  + ++ VT G K+A+ +    L  PG  VL+P PG+P YE   +    +     
Sbjct: 82  YGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVP 141

Query: 160 LLPERN-WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
           L  E N ++ DL+ +EA     T A+++ +P NP G V++   L+ I E+AR+  +++++
Sbjct: 142 LDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIIS 201

Query: 219 DEVYGHLTF-GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
           DE+Y  L + G+   + + L G+    IT+ S SK + + GWR GW+V            
Sbjct: 202 DEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE-------E 254

Query: 278 IIDSIKDCLSIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDT-LRESAEICYDGVKEIP 334
           +I +++   S Y     PT  Q A    L   + D   + +    RE  ++  + + EI 
Sbjct: 255 LIAALRKLKS-YLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG 313

Query: 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLR 391
            +S    PEG+     K+   L     D  EFA KL +E  V V PG   G    + ++R
Sbjct: 314 GLSVVKPPEGAFYLFPKIPELL-----DSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVR 368

Query: 392 IAFCAEPSALKDGLGRMKAFCQR 414
           ++       L++ L R+  F   
Sbjct: 369 LSLATSEETLEEALRRLARFLAE 391

Length = 393

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  194 bits (496), Expect = 5e-58
 Identities = 111/384 (28%), Positives = 177/384 (46%), Gaps = 30/384 (7%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
           R V+ LG G+P  F       EA  AI +A+  GK   Y   +GIP  R AIA  L RD 
Sbjct: 31  RDVISLGAGEPD-FDTPEHIKEA--AI-EALDDGK-TKYTPAAGIPELREAIAAKLKRDN 85

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHF 158
                   V VT G KQA+      L  PG  V++P P W  Y  +   A    V V   
Sbjct: 86  GLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFV--- 142

Query: 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
               E  +++ ++ +EA     T A+++ +P NP G V++   L+ IA++A +  + V++
Sbjct: 143 PTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLS 202

Query: 219 DEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPNGIF 273
           DE+Y  L +    +T +    S+ P      IT+   SK + + GWR G+        + 
Sbjct: 203 DEIYEKLVYDGAEFTSI---ASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKE--LI 257

Query: 274 QKSGIIDSIKDCLSIYSDIPTFIQ-GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332
           +    + S        S+  +  Q  A+   L    +D   ++     E  ++  DG+ E
Sbjct: 258 KAMSKLQS-----HSTSNPTSIAQYAAVAA-LNGP-QDEVEEMRQAFEERRDLMVDGLNE 310

Query: 333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRI 392
           IP + CP KPEG+      ++  L + I D +EFA  L +E  V V PGI  G   ++R+
Sbjct: 311 IPGLECP-KPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRL 369

Query: 393 AFCAEPSALKDGLGRMKAFCQRHT 416
           ++      L++GL R++ F +   
Sbjct: 370 SYATSLEDLEEGLERIERFLESLK 393

Length = 393

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  170 bits (432), Expect = 4e-49
 Identities = 85/366 (23%), Positives = 148/366 (40%), Gaps = 33/366 (9%)

Query: 42  RPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100
              + LG  +            +AE    DA+  G  N Y    G+P  R A+A +L R 
Sbjct: 1   TDKINLGSNEYLGDSGTLPAVAKAE---KDALAGGTRNLYGPTDGLPELREALAKFLGRS 57

Query: 101 LPYKLSADD-VYVTLGCKQAVEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHF 158
              KL  +  V    G    +E ++ +L   PG  +L+P P +P Y  I +    EV  +
Sbjct: 58  PVLKLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRY 117

Query: 159 DLLPERNWEVDLDAVEALADKNTAAMVII---NPGNPCGNVFTYHHLQEIAEMARKLRVM 215
            L    ++ +D DA+EA   + T    ++   +P NP G V T   L+++ ++A++  ++
Sbjct: 118 PLYSSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNIL 177

Query: 216 VVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
           ++ DE Y    FGS+         +    ++ +GS SK + + GWR G+++ N       
Sbjct: 178 LLVDEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAA----- 232

Query: 275 KSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKT--KEDFFCKLIDTLRESAEICYDGVKE 332
              +I  ++     +    T +Q A    L           ++   ++E  +   DG++ 
Sbjct: 233 ---VISQLRKLARPFY-SSTHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEA 288

Query: 333 I--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWL 390
                +      +     +  L+P            A  L +E  V VTPG   G   WL
Sbjct: 289 AGLSVL----PSQAGFFLLTGLDPEAAL------ALAQVLLEEVGVYVTPGSSFGGPGWL 338

Query: 391 RIAFCA 396
           RI    
Sbjct: 339 RITVAG 344

Length = 357

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score =  157 bits (398), Expect = 7e-44
 Identities = 104/375 (27%), Positives = 172/375 (45%), Gaps = 16/375 (4%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
           V+ L  GDP  F  F+     ++A   A++ G  N Y  + G+P  R AI     R    
Sbjct: 32  VIRLNIGDPVKFD-FQPPEHMKEAYCRAIKEGH-NYYGPSEGLPELREAIVKREKRKNGV 89

Query: 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163
            ++ DDV VT    +A+++I   L  PG  +L+P P +P Y G+ +        +  + E
Sbjct: 90  DITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEE 149

Query: 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223
             W+ D+D +     + T A+ +INP NP G ++    L+EI ++A +  + V++DE+Y 
Sbjct: 150 EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD 209

Query: 224 HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK 283
            +T+     +P  L    VPVI +  +SK +   GWR G++   DP G  + + + ++I 
Sbjct: 210 LMTYEGKHVSPGSLTKD-VPVIVMNGLSKVYFATGWRLGYIYFVDPEG--KLAEVREAID 266

Query: 284 DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE 343
               I     T  Q A    L     D+  + +  L+E  +  Y  + EIP IS   KP+
Sbjct: 267 KLARIRLCPNTPAQFAAIAGLTGPM-DYLEEYMKKLKERRDYIYKRLNEIPGISTT-KPQ 324

Query: 344 GSMVTMVKL--NPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNW-LRIAFCAEPS 399
           G+     ++   PW      DD EF L +  E  V+   G   G       R+ F     
Sbjct: 325 GAFYIFPRIEEGPW-----KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVE 379

Query: 400 ALKDGLGRMKAFCQR 414
            L++ + R + F + 
Sbjct: 380 ILEEAMDRFEEFMRE 394

Length = 398

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score =  156 bits (396), Expect = 1e-43
 Identities = 101/361 (27%), Positives = 155/361 (42%), Gaps = 34/361 (9%)

Query: 66  DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILS 125
           DA   A+  G    Y  N GIP  R A+A Y+SR        + + VT    QA+ +   
Sbjct: 44  DAAAAALADG-ETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQ 102

Query: 126 VLARPGANVLLPRPGWPYYEGI-----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKN 180
            L  PG  V+   P WP          A+   V +          W +DLD + A     
Sbjct: 103 ALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDF----GGGGWTLDLDRLLAAITPR 158

Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           T A+ I +P NP G   +   L+ I    R+  + +VADEVY  L +      P   F  
Sbjct: 159 TRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPS--FLD 216

Query: 241 IVP----VITLGSISKRWLVPGWRFGWLVTNDPNGIFQK-SGIIDSIKDCLSIYSDIPTF 295
           I      +I + S SK W + GWR GWLV   P  + Q    +I+    C      +  F
Sbjct: 217 IAEPDDRIIFVNSFSKNWAMTGWRLGWLVA--PPALGQVLEKLIEYNTSC------VAQF 268

Query: 296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPW 355
           +Q A    L++  EDF  +L+  LR S +   D ++ +P +    KP+G+M    +    
Sbjct: 269 VQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVA-KPDGAMYAFFR---- 322

Query: 356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ 413
            +  + D +  A +L  E  + + PG   G   + +LR  F  +P+ L + + R++ F  
Sbjct: 323 -IPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381

Query: 414 R 414
           R
Sbjct: 382 R 382

Length = 382

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score =  137 bits (347), Expect = 1e-36
 Identities = 100/366 (27%), Positives = 171/366 (46%), Gaps = 46/366 (12%)

Query: 62  VEAEDAIVDAVRSGKFNC--YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119
           ++  +   +A+++       Y+ + GIP  R A A Y  +     +  D++ +T G  +A
Sbjct: 42  IKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKK-WGIDVEPDEILITNGGSEA 100

Query: 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV-DLDAVEALAD 178
           +   +  +  PG  +L+P P +  Y G A    V++       E  + +   + +E L  
Sbjct: 101 ILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT 160

Query: 179 KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238
             T A++I NPGNP G V+T   L+ +AE+A+K  + +++DEVY    +  + YT     
Sbjct: 161 PKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSL 220

Query: 239 GSIVP-VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI-KDC---LSIYSDIP 293
             +   VI + S+SKR+   G R G L++ +         +I +  K C   LS     P
Sbjct: 221 EGLEDRVIIIDSVSKRYSACGARIGCLISKNKE-------LIAAAMKLCQARLS----PP 269

Query: 294 TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN 353
           T  Q     +L+ T E +F ++ +  ++  +I Y+ + +IP + C  KP+G+   + KL 
Sbjct: 270 TLEQIGAAALLD-TPESYFDEVREEYKKRRDILYEELNKIPGVVCE-KPKGAFYIIAKL- 326

Query: 354 P---------WLLEDINDDIEFALKLAKEESVIVTP--GIYV--GL-KNWLRIAFCAEPS 399
           P         WLL D N +          E+V+V P  G Y   GL KN +RIA+     
Sbjct: 327 PVDDAEDFAKWLLTDFNYN---------GETVMVAPASGFYATPGLGKNEIRIAYVLNEE 377

Query: 400 ALKDGL 405
            LK  +
Sbjct: 378 DLKRAM 383

Length = 397

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score =  129 bits (327), Expect = 1e-33
 Identities = 108/391 (27%), Positives = 180/391 (46%), Gaps = 56/391 (14%)

Query: 50  GDPTAFPCFRTAVEAEDAIV-DAVR-----SGKFNCYATNSGIPPARRAIADYLSRDLPY 103
           G+P  F       EA D I+ D +R      G    Y+ + G+  AR+AI  Y  +    
Sbjct: 41  GNPAPF-----GFEAPDEILRDVIRNLPTAQG----YSDSKGLFSARKAIMQYYQQKGIP 91

Query: 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDL 160
            +  DD+Y+  G  + + + +  L   G  VL+P P +P +     ++  K V   H+  
Sbjct: 92  DVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPV---HYLC 148

Query: 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220
             E  W  DLD + +     T A+VIINP NP G V++   L+EI E+AR+  +++ ADE
Sbjct: 149 DEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADE 208

Query: 221 VYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280
           +Y  + +    +  +      +  +T   +SK + V G+R GW+V + P       G I+
Sbjct: 209 IYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKK--HAKGYIE 266

Query: 281 SIKDCLS---IYSDIPT--FIQGAI--PQ-----ILEKTKEDFFCKLIDTLRESAEICYD 328
            + D L+   + +++P    IQ A+   Q     IL   +          L E  +  ++
Sbjct: 267 GL-DMLASMRLCANVPAQHAIQTALGGYQSINELILPGGR----------LYEQRDRAWE 315

Query: 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKN 388
            +  IP +SC  KP+G++    KL+P +   I+DD +F L L  +E V++  G   G  N
Sbjct: 316 LLNAIPGVSC-VKPKGALYAFPKLDPKVY-PIHDDEQFVLDLLLQEKVLLVQG--TGF-N 370

Query: 389 W-----LRIAFCAEPSALKDGLGRMKAFCQR 414
           W      RI        L++ +GR+  F   
Sbjct: 371 WPEPDHFRIVTLPRVDDLEEAIGRIGRFLSG 401

Length = 404

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score =  130 bits (328), Expect = 3e-33
 Identities = 98/385 (25%), Positives = 179/385 (46%), Gaps = 38/385 (9%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC--YATNSGIPPARRAIADYL-SRD 100
           ++ L  G+P  F  FRT     D +V  +     +   Y+ + G+  AR+AI  Y   + 
Sbjct: 148 ILKLNIGNPAPFG-FRTP----DEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKG 202

Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL 160
           LP  +  DD+Y   G  + + + +S L   G  VL+P P +P +            H+  
Sbjct: 203 LP-NVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRC 261

Query: 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220
             +  W  D+D + +     T A+VIINP NP G ++    LQ+I ++AR+ ++++ +DE
Sbjct: 262 DEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDE 321

Query: 221 VYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280
           +Y  L    + +T +      +  +T   +SK  ++ G+R GW++ +       K    D
Sbjct: 322 IYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSG-----NKRIAKD 376

Query: 281 SIK--DCLS---IYSDIPTFIQGAIPQIL--EKTKEDFFCKLIDTLR--ESAEICYDGVK 331
            I+  + L+   + S++P   Q  +   L   ++ +D+   L+   R  E  E+ Y+ + 
Sbjct: 377 YIEGLNMLANMRLCSNVPA--QSIVQTALGGHQSVKDY---LVPGGRVYEQRELVYNALN 431

Query: 332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNW-- 389
            IP IS   KP+ +     K++     +I+DD +FAL L  ++ V++  G      NW  
Sbjct: 432 AIPGISA-VKPKAAFYIFPKIDVKKF-NIHDDEQFALDLLHDKKVLIVQG---TGFNWDK 486

Query: 390 ---LRIAFCAEPSALKDGLGRMKAF 411
               R+ +      L+D + R+  F
Sbjct: 487 PDHFRVVYLPRLEDLEDAMDRLADF 511

Length = 517

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score =  126 bits (319), Expect = 1e-32
 Identities = 85/338 (25%), Positives = 153/338 (45%), Gaps = 29/338 (8%)

Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y  + G       I  Y S++       +++  T+G    + + L  +  PG  V++  P
Sbjct: 62  YTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEP 121

Query: 140 GW-PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198
            + PY + I       +   +   E  +++++  +EAL    T A+++ +P NP G VF+
Sbjct: 122 YFTPYKDQIEMVGGKPI-ILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFS 180

Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVP 257
              L+EIA++A +  + +++DEVY   +F    + PM     +    IT GS SK + + 
Sbjct: 181 KETLEEIAKIAIEYDLFIISDEVYDGFSF-YEDFVPMATLAGMPERTITFGSFSKDFAMT 239

Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIKD-----CLSIYSDIPTFIQGAIPQILEKTKEDFF 312
           GWR G+++  D         II++ K      C S     PT  Q A    L K ++   
Sbjct: 240 GWRIGYVIAPD--------YIIETAKIINEGICFS----APTISQRAAIYAL-KHRDTIV 286

Query: 313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAK 372
             + +  ++  E  Y  ++ IP +S  + P+GS+   + +    L      +EF  KL K
Sbjct: 287 PLIKEEFQKRLEYAYKRIESIPNLSL-HPPKGSIYAFINIKKTGL----SSVEFCEKLLK 341

Query: 373 EESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM 408
           E  V+V PG   G   + ++R+A       L++   R+
Sbjct: 342 EAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRI 379

Length = 384

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score =  127 bits (320), Expect = 1e-32
 Identities = 105/372 (28%), Positives = 165/372 (44%), Gaps = 31/372 (8%)

Query: 47  LGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS 106
           LG G    FP F      ++A + A+R GK N YA   G+P    AIA+   +D    + 
Sbjct: 59  LGQG----FPNFDGPDFVKEAAIQAIRDGK-NQYARGFGVPELNSAIAERFKKDTGLVVD 113

Query: 107 AD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165
            + +V VT GC +A+   +  L  PG  V+L  P +  YE        +++   L P  +
Sbjct: 114 PEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-D 172

Query: 166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL 225
           + V  D ++A     T A++I  P NP G +FT   L+ IA + ++  V+   DEVY  L
Sbjct: 173 FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKL 232

Query: 226 TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN---GIFQKSGIIDSI 282
            F     +   L G     +T+ S+ K + + GW+ GW +   P+   G+ Q        
Sbjct: 233 AFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSF---- 287

Query: 283 KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342
              L+  +  P  +Q A    L +  E ++ +L        +I  +G+KE+     P   
Sbjct: 288 ---LTFATATP--MQWAAVAAL-RAPESYYEELKRDYSAKKDILVEGLKEVGFKVYP--S 339

Query: 343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP--GIYVGL---KNWLRIAFCAE 397
            G+   MV   P+  E   +DI F   L +E  V   P    Y+     KN +R AFC +
Sbjct: 340 SGTYFVMVDHTPFGFE---NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKD 396

Query: 398 PSALKDGLGRMK 409
              L+  + RMK
Sbjct: 397 EETLRAAVERMK 408

Length = 413

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score =  122 bits (307), Expect = 1e-30
 Identities = 88/398 (22%), Positives = 153/398 (38%), Gaps = 42/398 (10%)

Query: 28  SLASIIDSVNKNDPRPVVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSG 85
            L    D     D   V+    G  DP+ FP       A   ++    +     Y   +G
Sbjct: 75  ELLKPSDPELLEDDPSVIDFAGGLPDPSLFP-LEALRRALARVLRNYGASLALQYGPTAG 133

Query: 86  IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
           +P  R AIA YL          + + +T G +QA++++L +L  PG  VL+  P +P   
Sbjct: 134 LPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL 193

Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP--GNPCGNVFTYHHLQ 203
              +     V    +  +    +D +A+E    +     V + P   NP G   +    +
Sbjct: 194 QALEALGARVIPVPVDED---GIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRK 250

Query: 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRF 261
            +  +A K  V+++ D+ YG L +      P  L     P  VI LGS SK  L PG R 
Sbjct: 251 ALLALAEKYDVLIIEDDYYGELRYD--GPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRL 307

Query: 262 GWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDTL 319
           G++V            +I+ +   L   +D+   +  Q A+   L       + + +  L
Sbjct: 308 GYVVAP--------PELIEKLLR-LKQAADLGPSSLSQAALAAFL---LSGHYDRHLRRL 355

Query: 320 RESAEICYDGVKEI-----PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374
           R       D + E      P ++   +PEG +   ++L   +     D  E      ++ 
Sbjct: 356 RREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI-----DARELLAAALEKG 410

Query: 375 SVIVTPGIYV----GLKNWLRIAF-CAEPSALKDGLGR 407
            V+   G         +N LR++F       +++G+ R
Sbjct: 411 VVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKR 448

Length = 459

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score =  120 bits (303), Expect = 2e-30
 Identities = 112/401 (27%), Positives = 164/401 (40%), Gaps = 53/401 (13%)

Query: 27  TSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           ++LA    +VN         LG G    FP      E  +A  +A+  G  N Y    GI
Sbjct: 18  SALAVRTGAVN---------LGQG----FPDEDGPPEMLEAAQEAIAGGV-NQYPPGPGI 63

Query: 87  PPARRAIADYLSRDLPYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY 143
           P  R AIA    R   Y L  D   +V VT+G  +A+   +  L  PG  VLL  P   Y
Sbjct: 64  PELRAAIAAQRRRR--YGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEP---Y 118

Query: 144 YEGIA--------QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195
           Y+  A         R  V +        R + +DLDA+ A     T A+++ +P NP G 
Sbjct: 119 YDSYAAVIAMAGAHRVPVPLVP----DGRGFALDLDALRAAVTPRTRALIVNSPHNPTGT 174

Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITLGSISKRW 254
           V T   L  IAE+A +  ++V+ DEVY HL F    + P+  L G     +T+ S +K +
Sbjct: 175 VLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTF 234

Query: 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCK 314
            V GW+ GW        I   + +  + K  L+     P   Q A+   L+  ++ +   
Sbjct: 235 NVTGWKIGW-ACGPAPLI---AAVR-AAKQYLTYVGGAP--FQPAVAHALD-HEDAWVAA 286

Query: 315 LIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374
           L D+L+   +    G+ E           G+        P L  D  D  EF   L +  
Sbjct: 287 LRDSLQAKRDRLAAGLAEAGFEVHD--SAGTYFLCADPRP-LGYD--DGTEFCRALPERV 341

Query: 375 SVIVTP--GIYVGLKNW---LRIAFCAEPSALKDGLGRMKA 410
            V   P    Y     W   +R AFC     L + + R++A
Sbjct: 342 GVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRA 382

Length = 387

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score =  116 bits (292), Expect = 6e-29
 Identities = 97/367 (26%), Positives = 150/367 (40%), Gaps = 57/367 (15%)

Query: 66  DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILS 125
           +A    +   K   Y    G P  + A+A      L   +  +++  T G   A  ++L 
Sbjct: 45  EAFYQELGQKKLT-YGWIEGSPEFKEAVAS-----LYQNVKPENILQTNGATGANFLVLY 98

Query: 126 VLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV 185
            L  PG +V+   P +     I +    EV ++ L  E  W  DLD +  L   NT  + 
Sbjct: 99  ALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLIC 158

Query: 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV- 244
           I N  NP G +    +L+EI E+AR +   V++DEVY          TP     SI  + 
Sbjct: 159 INNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVY--RPLDEDGSTP-----SIADLY 211

Query: 245 ---ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI- 300
              I+  S+SK + +PG R GW+  N            + + D L  Y D      G   
Sbjct: 212 EKGISTNSMSKTYSLPGIRVGWIAAN------------EEVIDILRKYRDYTMICAGVFD 259

Query: 301 -----------PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTM 349
                        ILE+ +          +R +  I  + V + P +S   KP+    + 
Sbjct: 260 DMLASLALEHRDAILERNR--------KIVRTNLAILDEWVAKEPRVSYV-KPKAVSTSF 310

Query: 350 VKLNPWLLEDINDDIE-FALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRM 408
           VKL      D++   E F LKL KE  V++ PG    L+  +RI +C +   LK GL ++
Sbjct: 311 VKL------DVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKL 364

Query: 409 KAFCQRH 415
             F +  
Sbjct: 365 SEFLREF 371

Length = 373

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score =  115 bits (289), Expect = 5e-28
 Identities = 86/380 (22%), Positives = 162/380 (42%), Gaps = 52/380 (13%)

Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPR 138
           Y  ++G P  R+A+A ++ R         D+++T G    ++++L +L   P   V++P 
Sbjct: 111 YTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPI 170

Query: 139 PGWPYYEG-IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGN 191
           P +P Y   I      +V  + L  E+ W +D + +E   ++         A+V+INPGN
Sbjct: 171 PQYPLYSAAITLLGGKQV-PYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGN 229

Query: 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVY------GHLTFGS---IPYTPMGL-FGSI 241
           P G V T   ++EI +   +  ++++ADEVY      G   F S   +    +   + + 
Sbjct: 230 PTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLE-LPAEYNTD 288

Query: 242 VPVITLGSISKRWLVP-GWRFGWL-VTN-DPNGIFQKSGIIDSIKDCLS------IYSDI 292
           V +++  S SK  +   G R G+  +TN  P    Q   I       L       + + +
Sbjct: 289 VELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQ---IYKLASINLCSNVVGQLMTGL 345

Query: 293 ----PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT 348
               P     + P    +        +  +L+  AE+  D + +I  +SC    EG+M  
Sbjct: 346 MCNPPREGDASYPLYKRERDA-----IFTSLKRRAELLTDELNKIEGVSC-QPVEGAMYA 399

Query: 349 MVK--LNPWLLEDIND-----DIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFCAEP 398
             +  L    +++  +     D+ + L+L +   ++V PG   G K      RI      
Sbjct: 400 FPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPE 459

Query: 399 SALKDGLGRMKAFCQRHTKK 418
             +++ + ++K F +   KK
Sbjct: 460 EQIEEMVKKIKEFHESFMKK 479

Length = 481

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score =  109 bits (274), Expect = 2e-26
 Identities = 90/362 (24%), Positives = 166/362 (45%), Gaps = 26/362 (7%)

Query: 62  VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD-VYVTLGCKQAV 120
            EA +A+ + + + + + Y    GIPP   AI   L +D   +L+ +  + VT G   A 
Sbjct: 43  PEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAF 102

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALADK 179
              +  +  PG  ++L  P   YY        +      L+P + N+++  +A+E     
Sbjct: 103 MNAILAITDPGDEIILNTP---YYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITP 159

Query: 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP-YTPMGLF 238
            T A+V I+P NP G V+    L+ + ++  +  +  ++DE Y + T+  +  ++P  + 
Sbjct: 160 KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIP 219

Query: 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQG 298
           GS    I+L S+SK +    WR G++V   P  + +    I  I+D + I    P   Q 
Sbjct: 220 GSGNHTISLYSLSKAYGFASWRIGYMVI--PIHLLEA---IKKIQDTILICP--PVVSQY 272

Query: 299 AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358
           A    L +  + +  + +  + +  +I    + ++      +   G+    +K+N     
Sbjct: 273 AALGAL-QVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVN----T 327

Query: 359 DINDDIEFALKLAKEESVIVTPGIYVGLKN--WLRIAFCA-EPSALKDGLGR----MKAF 411
           D+ND  E   +L +E  V V PG   G+KN  +LRIA+ A + +  K+G+ R    +K  
Sbjct: 328 DLNDF-ELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTI 386

Query: 412 CQ 413
            Q
Sbjct: 387 VQ 388

Length = 389

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score =  106 bits (265), Expect = 2e-25
 Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 25/371 (6%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
           V+ LG G+P     F T    ++A   A+  G +  Y  N+GIP  R AIA+Y  +    
Sbjct: 35  VISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYGV 89

Query: 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163
            +  D+V VT G  +A  +    L   G  V++P P +  Y   A+  + +     L  E
Sbjct: 90  DVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREE 149

Query: 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223
             ++ D D +  L  K T  +VI  P NP G        + IA++A    + +++DE Y 
Sbjct: 150 NEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE 209

Query: 224 HLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281
           H  +    + PM  +    P   I   S SK + + GWR G+++   P  +     I D 
Sbjct: 210 HFLYEGAKHYPMIKYA---PDNTILANSFSKTFAMTGWRLGFVIA--PEQV-----IKDM 259

Query: 282 IKDCLSIYSDIPTFIQGA-IPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN 340
           IK    I  ++ +F+Q A I  +  K       ++     E  ++    +KE+P I    
Sbjct: 260 IKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK-VF 318

Query: 341 KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEP 398
           +P+G+      ++      ++ + +FA  L ++  V+V PG   G   + ++RI++    
Sbjct: 319 EPKGAFYVFANIDE---TGMSSE-DFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSK 374

Query: 399 SALKDGLGRMK 409
             L + + RM+
Sbjct: 375 EKLIEAMERME 385

Length = 391

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score =  105 bits (264), Expect = 6e-25
 Identities = 85/354 (24%), Positives = 153/354 (43%), Gaps = 50/354 (14%)

Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y  N+G P  R AIA+ L+R     L+AD + +T G   A+ V L  +  PG  V++  P
Sbjct: 69  YMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAP 128

Query: 140 GWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV 196
            +  Y         K V V          ++ DLDA+EA     T A++I +P NP G V
Sbjct: 129 YFVEYRFYVDNHGGKLVVV----PTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVV 184

Query: 197 FTYHHLQEIAEMARKLR------VMVVADEVYGHLTFGSI--PYTPMGLFGSIVPVITLG 248
           ++   L+ +A +  +        + +++DE Y  + +     PY    +F      I + 
Sbjct: 185 YSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPY----IFKYYDNSIVVY 240

Query: 249 SISKRWLVPGWRFGWLVTND--PNGIFQKSGIIDSIKDCLSIYSDI------PTFIQGAI 300
           S SK   +PG R G++  N    +         D +   L   + I      P  +Q  +
Sbjct: 241 SFSKSLSLPGERIGYIAVNPEMED--------ADDLVAALVFANRILGFVNAPALMQRVV 292

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
            + L+ T +      +   + + ++ YDG+ E+    C  KP+G+     K +P      
Sbjct: 293 AKCLDATVD------VSIYKRNRDLLYDGLTELG-FECV-KPQGAFYLFPK-SP-----E 338

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414
            DD+ F  + AK+ ++++ PG   G   + R+++C +   ++  L   +   + 
Sbjct: 339 EDDVAF-CEKAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKE 391

Length = 394

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score =  102 bits (256), Expect = 5e-24
 Identities = 92/379 (24%), Positives = 159/379 (41%), Gaps = 37/379 (9%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
           V+ LG GDP   P  +  VEA   +  A  + + + Y +  G+   R+A+AD+  R    
Sbjct: 31  VISLGIGDPD-LPTPKHIVEA---LCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGV 86

Query: 104 KLSADDVYVTL-GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP 162
           +L  +   ++L G K+ +  I      PG  VL+P PG+P Y         E     L  
Sbjct: 87  ELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKE 146

Query: 163 ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222
           E  +  D DA+     K    M I  P NP G V      +E+ E A++  ++V  D  Y
Sbjct: 147 ENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAY 206

Query: 223 GHLTF-GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281
             +TF G    + + + G+    I   S+SK + + GWR G  V N              
Sbjct: 207 SEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN-------------- 252

Query: 282 IKDCLSIYSDIPTFIQGAIPQILE-------KTKEDFFCKLIDTLRESAEICYDGVKEIP 334
             D ++    + T +   + Q ++          +D   ++    +   ++  + +K+I 
Sbjct: 253 -ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG 311

Query: 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRI 392
            I    KP+ +    V      + +     EFA +L +E  V+VTPG+  G   + ++RI
Sbjct: 312 -IDV-EKPKATFYVWVP-----VPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRI 364

Query: 393 AFCAEPSALKDGLGRMKAF 411
           +       L++ + R+K  
Sbjct: 365 SLTVPDERLEEAVARIKKL 383

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score =  102 bits (255), Expect = 6e-24
 Identities = 102/382 (26%), Positives = 167/382 (43%), Gaps = 38/382 (9%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
           V+ LG G+P     F T     +A + ++  G +  Y  N+G+   R+ IA YL +    
Sbjct: 22  VISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAV 76

Query: 104 KLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFD 159
               +D + VT+G  QA++V +  +  PG  VL+  P +  Y  +   A    V V    
Sbjct: 77  SYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPV-ATT 135

Query: 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219
           L  E  ++V    +EA     T A+++ +P NP G V     L+EIA +  K  ++V++D
Sbjct: 136 L--ENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSD 193

Query: 220 EVYGHLTFGSIPYTPMG-LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278
           E+Y  LT+    YT    + G     I +   SK + + GWR G++    P    +    
Sbjct: 194 EIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA--PVYFSEA--- 247

Query: 279 IDSIKDCLSI--YSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334
                  L I  YS +  PT  Q A  + L    +D   ++ D+ R+          EI 
Sbjct: 248 ------MLKIHQYSMMCAPTMAQFAALEALRAGNDDVI-RMRDSYRKRRNFFVTSFNEIG 300

Query: 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRI 392
            ++C   P G+      ++   L       EFA +L  EE V V PG   G   + ++R 
Sbjct: 301 -LTCH-VPGGAFYAFPSISSTGLS----SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRC 354

Query: 393 AFCAEPSALKDGLGRMKAFCQR 414
           ++      L++ + RMK F + 
Sbjct: 355 SYATSLEQLQEAMKRMKRFVEN 376

Length = 378

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score =  100 bits (250), Expect = 2e-23
 Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 36/305 (11%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           ++A+ADY      Y +  + + +  G  + +E+++     PG  VL+P P +  YE  A+
Sbjct: 60  KQALADY------YGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAK 113

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
               EV    L    + ++DL+ +    D     + + +P NP GN+ +   ++ + E  
Sbjct: 114 IHGAEVVKVPLDE--DGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERT 171

Query: 210 RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
            +   +VV DE YG   F   P + + L      +I L ++SK + + G R G+ + N  
Sbjct: 172 PE-DALVVVDEAYGE--FSGEP-STLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAE 227

Query: 270 NGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329
                   IID++    + + ++    Q A    L    +DF  K ++ +    E  YDG
Sbjct: 228 --------IIDALNKVRAPF-NLSRLAQAAAIAALR--DDDFIEKTVEEINAERERLYDG 276

Query: 330 VKEIPCIS-CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVGLK 387
           +K++P +   P+              ++L     D +   +   E+ +IV     Y GL 
Sbjct: 277 LKKLPGLEVYPSDAN-----------FVLIRFPRDADALFEALLEKGIIVRDLNSYPGLP 325

Query: 388 NWLRI 392
           N LRI
Sbjct: 326 NCLRI 330

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score = 99.8 bits (249), Expect = 3e-23
 Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 33/292 (11%)

Query: 63  EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122
           E  +A++  +  G++  Y    G P  R  I   L       L  D+  +T G  +++ +
Sbjct: 45  EVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDDEALITAGATESLYL 98

Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALADKNT 181
           ++     PG N + P PG+   +  A R   EV    +   E N+++  + V+   D+NT
Sbjct: 99  VMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENT 158

Query: 182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP---YTPMGLF 238
             + +I+P NP G+ +T   ++E AE+AR     ++ D  Y            Y P    
Sbjct: 159 RLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEH-- 216

Query: 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFI-- 296
                 +T  S SK + + G R G +V            +I+ +K    + +D+ T +  
Sbjct: 217 -----TVTSYSFSKIFGMAGLRIGAVVA--------TPDLIEVVK--SIVINDLGTNVIA 261

Query: 297 -QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-EGSM 346
            + AI  +  K K+++  ++  T  ++ ++  + V EI  +  P  P  G+M
Sbjct: 262 QEAAIAGL--KVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNM 311

Length = 380

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score = 98.3 bits (245), Expect = 2e-22
 Identities = 97/401 (24%), Positives = 157/401 (39%), Gaps = 61/401 (15%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
           R +V L  G+P     F T    + A V A+  G+   Y   +G P  R+AI   L R  
Sbjct: 33  RSIVDLTVGEPD----FDTPDHIKQAAVAAIERGETK-YTLVNGTPALRKAIIAKLERRN 87

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY-------EGIAQRKQVE 154
               + +++ V  G KQA+ + L      G  V++P P W  Y       +G      V 
Sbjct: 88  GLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDG----TPVI 143

Query: 155 VR-----HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE-M 208
           V       F L PE        A+EA     T  +++  P NP G V++   L+ +A+ +
Sbjct: 144 VACPEEQGFKLTPE--------ALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVL 195

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGW 263
            R   V+V+ D++Y H+ F      P     +  P     V+    +SK + + GWR G+
Sbjct: 196 LRHPHVLVLTDDIYDHIRFDD---EPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGY 252

Query: 264 LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFI-QGAIPQILEKTKEDFFCKLIDTLRES 322
                       + +I +I    S  S  P+ I Q A    L    + F  + +   ++ 
Sbjct: 253 AAGP--------ADLIAAINKLQSQSSSCPSSISQAAAAAAL-NGDQSFVTESVAVYKQR 303

Query: 323 AEICYDGVKEIPCISCPNKPEGSMVTMV-------KLNP--WLLEDINDDIEFALKLAKE 373
            +     +  IP +SC   P+G+    V       K  P   +LE    D +  L L   
Sbjct: 304 RDYALALLNAIPGLSC-LVPDGAFYLYVNCAGLIGKTTPEGKVLE---TDQDVVLYLLDS 359

Query: 374 ESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414
             V V  G   GL  + R++       L++   R++     
Sbjct: 360 AGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAA 400

Length = 402

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 96.4 bits (240), Expect = 4e-22
 Identities = 86/335 (25%), Positives = 134/335 (40%), Gaps = 36/335 (10%)

Query: 85  GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY 144
           G    R AIAD       +      V  T G  +A+ ++L+ L RPG  V++  P +   
Sbjct: 52  GGEGLRAAIADRWRGGDAHV-----VMTTHGSSEAIYLVLTALLRPGDEVVVVDPAYHSL 106

Query: 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204
             +A     EVR + LL  R +  DLDA+ AL    T A+V+  P NP G   T   L E
Sbjct: 107 SHLAVATGCEVRPWPLLAVRGFRPDLDALRALLTPRTRAVVVNFPHNPTGASVTPRELDE 166

Query: 205 IAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGW 263
           + E A +   +++ D  +  L   + P   P  L+     VI+ G++SK + +PG R GW
Sbjct: 167 LLERAARSGAVLLWDNAFADLVHDAPPLPDPSALYDR---VISFGTLSKAFGLPGLRVGW 223

Query: 264 LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKE--DFFCKLIDTLRE 321
            V           G  D + + + +       +   +  + E   E  D    LI     
Sbjct: 224 CV-----------GPADLLAELVRLRDYTTLSLSPLVELLAEVAVEHAD---ALIGPRLA 269

Query: 322 SA----EICYDGVKEIP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV 376
            A        D     P  + C   PEG +    +          D  +   +L     V
Sbjct: 270 EARANRRRLLDWAAAHPDVVRCT-PPEGGVAAFPR-----FPGHADVTDLCRRLLARHGV 323

Query: 377 IVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF 411
           ++ PG   G  + +R+ F    + L+ GL R+ AF
Sbjct: 324 LLVPGSCFGAADRMRLGFGGSSAELRAGLARLSAF 358

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score = 95.6 bits (238), Expect = 1e-21
 Identities = 88/380 (23%), Positives = 162/380 (42%), Gaps = 67/380 (17%)

Query: 63  EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSR--DLPYKLSADDVYVTLGCKQAV 120
           EA    +DA +S     Y   +G+   R+A AD++    +L Y    +++ VT+G  +A+
Sbjct: 50  EAAKRAIDANQSH----YTGMAGLLELRQAAADFVKEKYNLDYA-PENEILVTIGATEAL 104

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEV-------RHFDLLPERNWEVDLDAV 173
              L+ +  PG  VLLP P +P YE I      E+         F L PE      L+  
Sbjct: 105 SASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEM-----LEKA 159

Query: 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT 233
                    A+++  P NP G  ++   ++ +A++ +K  + V++DEVY  LT+   P+ 
Sbjct: 160 ILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHV 219

Query: 234 PMGLFGSIVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK-------- 283
            +  +   +P   I +  +SK   + GWR G         IF  +     +         
Sbjct: 220 SIAEY---LPDQTILINGLSKSHAMTGWRIGL--------IFAPAEFTAQLIKSHQYLVT 268

Query: 284 --DCLSIYSDIPTFIQG---AIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCIS 337
               ++ ++ +     G   A+P   E  K  D+   +I+ + +       G K I    
Sbjct: 269 AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDY---IIEKMTDL------GFKII---- 315

Query: 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC 395
              KP+G+     K+ P       D  +F    A++++V   PG   G   + ++R+++ 
Sbjct: 316 ---KPDGAFYIFAKI-PAGYN--QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA 369

Query: 396 AEPSALKDGLGRMKAFCQRH 415
           A    +K+ + R+K + + H
Sbjct: 370 ASMETIKEAMKRLKEYMEEH 389

Length = 391

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 91.6 bits (228), Expect = 2e-20
 Identities = 96/365 (26%), Positives = 154/365 (42%), Gaps = 38/365 (10%)

Query: 66  DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD---DVYVTLGCKQAVEV 122
            A  DA+  G  N Y    G+P  R+A+A + +R     L  D   +V VT G  +A+  
Sbjct: 46  RAAADALLDG-SNQYPPMMGLPELRQAVAAHYARF--QGLDLDPETEVMVTSGATEALAA 102

Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
            L  L  PG  V+L +P +  Y  + +R     R   L P   W +   A+ A     T 
Sbjct: 103 ALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPH-WRLPRAALAAAFSPRTK 161

Query: 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSI 241
           A+++ NP NP G VF    L  +AE  ++   + + DEV+ H+ F    + P M L G  
Sbjct: 162 AVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMR 221

Query: 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF-----I 296
              + +GS  K + + GW+ G+ V   P            +   L+      TF     +
Sbjct: 222 ERTVKIGSAGKIFSLTGWKVGF-VCAAP-----------PLLRVLAKAHQFLTFTTPPNL 269

Query: 297 QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNP 354
           Q A+   L K  +D+F  +   L  S +    G++ I  P +      +G+    V L P
Sbjct: 270 QAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRIGFPVLPS----QGTYFLTVDLAP 324

Query: 355 WLLEDINDDIEFALKLAKEESVIVTP--GIYVG--LKNWLRIAFCAEPSALKDGLGRMKA 410
             L +  DD+ F  +L +E  V   P    Y    + + +R  F    + L + + R+ A
Sbjct: 325 LGLAE--DDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAA 382

Query: 411 FCQRH 415
             +R 
Sbjct: 383 ARRRR 387

Length = 387

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 91.3 bits (227), Expect = 3e-20
 Identities = 96/401 (23%), Positives = 158/401 (39%), Gaps = 73/401 (18%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
             V+ L  G+P  F      V A  A   A+ +G    Y    G+P  R AIA + ++  
Sbjct: 32  HDVIHLEIGEPD-FTTAEPIVAAGQA---ALAAGHTR-YTAARGLPALREAIAGFYAQRY 86

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-------YYEGIAQRKQVE 154
              +  + + VT G   A+ +  S+L  PG + LL  PG+P         EG AQ   V 
Sbjct: 87  GVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVG 146

Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
                  P+  +++    VE   + +T   ++ +P NP G + +     E+A +++ LR 
Sbjct: 147 -------PDSRYQLTPALVERHWNADTVGALVASPANPTGTLLS---RDELAALSQALRA 196

Query: 215 ---MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
               +V DE+Y  LT+G    + + +         L S SK + + GWR GWLV      
Sbjct: 197 RGGHLVVDEIYHGLTYGVDAASVLEVDDDAF---VLNSFSKYFGMTGWRLGWLVA----- 248

Query: 272 IFQKSGIIDSIKDCLSIYSDIPTFIQGAI-----PQ---ILEKTKEDFFCK---LIDTLR 320
               + + +  K   ++Y    T  Q A      P+   ILE  + +F  +   L+  LR
Sbjct: 249 --PPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALR 306

Query: 321 ESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI----NDDIEFALKLAKEESV 376
           E                   +P+G+         +L  DI     D   F     + E V
Sbjct: 307 ELG------------FGIAVEPQGAF--------YLYADISAFGGDAFAFCRHFLETEHV 346

Query: 377 IVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQR 414
             TPG+  G       +R A+      L++ + R+    + 
Sbjct: 347 AFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLRS 387

Length = 387

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 90.4 bits (225), Expect = 6e-20
 Identities = 91/369 (24%), Positives = 165/369 (44%), Gaps = 39/369 (10%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117
           F T  E  +A+ + V  G F  Y   S    A  AIA +  +   +++  + +    G  
Sbjct: 37  FPTPPEIIEALRERVDHGVFG-YPYGSDELYA--AIAHWFKQRHQWEIKPEWIVFVPGVV 93

Query: 118 QAVEVILSVLARPGANVLLPRPGW-PYYEGIA--QRKQVEVRHFDLLPERN--WEVDLDA 172
             + + +  L +PG  V++  P + P+Y  I    RK +E      L E +  +E+D DA
Sbjct: 94  PGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENP----LVEDDGRYEIDFDA 149

Query: 173 VE-ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231
           +E A  D+     ++ NP NP G V+T   L++IAE+  +  V V++DE++  L  G   
Sbjct: 150 LEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHK 209

Query: 232 YTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPNGI--FQKSGIIDSIKD 284
           + P   F S+        ITL S SK + + G +  +++ ++      F K  +  +   
Sbjct: 210 HIP---FASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKR-LKRNGLH 265

Query: 285 CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV-KEIPCISCPNKPE 343
             S    I T       +      E +  +L++ L+++ +   D + K +P +    +P+
Sbjct: 266 GPSALGIIAT-------EAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKV-TEPQ 317

Query: 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSAL 401
           G+ +  +      L    DD E A  L +E  V ++PG   G     ++R+ F    + L
Sbjct: 318 GTYLAWLDCRELGL----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAIL 373

Query: 402 KDGLGRMKA 410
           ++ L R+K 
Sbjct: 374 EEALERLKR 382

Length = 388

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score = 90.2 bits (224), Expect = 7e-20
 Identities = 88/359 (24%), Positives = 156/359 (43%), Gaps = 48/359 (13%)

Query: 77  FNCYATNSGIPPARRAIADYLSR--DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134
           +  Y  N+G+   R+A  +++    DL Y     ++ VT+G  +A+++    +  PG  V
Sbjct: 58  YTSYTHNAGLLELRKAACNFVKDKYDLHYS-PESEIIVTIGASEAIDIAFRTILEPGTEV 116

Query: 135 LLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCG 194
           +LP P +P YE I +    +    D      + +  +A+E    + T  +V+  P NP G
Sbjct: 117 ILPAPIYPGYEPIIRLCGAKPVFIDTRST-GFRLTAEALENAITEKTRCVVLPYPSNPTG 175

Query: 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG----SIPYTPMGLFGSIVPVITLGSI 250
              +   LQ+IA++ +   + V++DE+Y  L +     SI + P     +IV    +  +
Sbjct: 176 VTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIV----INGL 231

Query: 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK-------DCLSIYSDIPTFIQGAIPQI 303
           SK   + GWR G+L        F  S +   I         C S  S      Q A  + 
Sbjct: 232 SKSHSMTGWRIGFL--------FAPSYLAKHILKVHQYNVTCASSIS------QYAALEA 277

Query: 304 LEKTKEDFFCKLI-DTLRESAEICYDGVKE--IPCISCPNKPEGSMVTMVKLNPWLLEDI 360
           L   K+D   K++    ++  +  Y+ +    +       KP G+      L P +    
Sbjct: 278 LTAGKDD--AKMMRHQYKKRRDYVYNRLISMGLDVE----KPTGAFY----LFPSIGHFT 327

Query: 361 NDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
               +FAL L +E  + V PG       + ++R+++      LK+GL R++AF Q+  K
Sbjct: 328 MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQKAK 386

Length = 387

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score = 87.8 bits (218), Expect = 4e-19
 Identities = 67/306 (21%), Positives = 121/306 (39%), Gaps = 34/306 (11%)

Query: 89  ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA 148
            R A+A+Y        +  ++V V  G  + +E+++     PG  VL+P P +  YE  A
Sbjct: 62  LRAALAEYYG-----VVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAA 116

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
           Q    EV      P + + +DLDA+ A     T  + + NP NP G +     L+ + E 
Sbjct: 117 QLAGAEVVKV---PLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEA 173

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
             +   +VV DE Y    F       +  +     +I L + SK + + G R G+ + N 
Sbjct: 174 LPE-GGLVVIDEAYIE--FSPESSLELLKYPP--NLIVLRTFSKAFGLAGLRVGYAIANP 228

Query: 269 PNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328
                    +I ++      ++ + +    A    L     D+  + ++ +RE  E  Y 
Sbjct: 229 --------ELIAALNKVRPPFN-VSSPALAAAIAALR--DADYLEESVERIREERERLYA 277

Query: 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-K 387
            +K +           S    V     L+   + +     +   ++ ++V     VGL  
Sbjct: 278 ALKALGL----FGVFPSQANFV-----LVRVPDAEAAALAEALLKKGILVRDCSSVGLLP 328

Query: 388 NWLRIA 393
            +LRI 
Sbjct: 329 GYLRIT 334

Length = 356

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score = 88.1 bits (219), Expect = 5e-19
 Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 10/300 (3%)

Query: 66  DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILS 125
           + + + V   K   Y    G+   R  +A+  ++    +++ DD+    G   A+  I  
Sbjct: 55  EIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG 114

Query: 126 VLARPGANVLLPRPGWP-YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN--TA 182
           +L R  A V+ P P +  +    A         + L PE NW  DLD +E     N   A
Sbjct: 115 LL-RREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIA 173

Query: 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV 242
            +++INP NP G V+    L+EI ++AR+  + ++ DE+Y ++ +      P+      V
Sbjct: 174 GILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDV 233

Query: 243 PVITLGSISKRWLVPGWRFGWL-VTN-DPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           P I L  ISK    PG R GW+ V N D + +F+K   I+SI +   I     T  Q AI
Sbjct: 234 PGIALKGISKELPWPGSRCGWIEVYNADKDEVFKK--YINSILNAKMIEVCSTTLPQMAI 291

Query: 301 PQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359
           P+I+   + +++  +      + + I Y+ +K++P +   N+  G+    V     +L +
Sbjct: 292 PRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKV-NRTNGAFYMTVVFEDGVLNN 350

Length = 433

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 86.9 bits (216), Expect = 9e-19
 Identities = 97/379 (25%), Positives = 162/379 (42%), Gaps = 41/379 (10%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
           V+ LG GDP   P     +EA   +  AV   + + Y +  G+   R+A+AD+  R    
Sbjct: 33  VISLGIGDPD-LPTPDHIIEA---MCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGV 88

Query: 104 KLSADDVYVTL-GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP 162
           +L  +   ++L G K+ +  I      PG  VL+P PG+P Y+        E     L  
Sbjct: 89  ELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKE 148

Query: 163 ERNWEVDLDAV-EALADKNTAAMVIIN-PGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220
           E  +  DLDA+ E +A K  A ++ IN P NP G V      +E+ + A+K  ++V  D 
Sbjct: 149 ENGFLPDLDAIPEDVAKK--AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDA 206

Query: 221 VYGHLTFGSIPYTPMGLFGSIVPV-------ITLGSISKRWLVPGWRFGWLVTNDPNGIF 273
            Y  + +    Y P     S + V       I   S+SK + + GWR G+ V N      
Sbjct: 207 AYSEIAYDG--YKPP----SFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN------ 254

Query: 274 QKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332
             + +I  +    S + S +   IQ A    L    ++   +L    +E  +I  +G+++
Sbjct: 255 --ADLIAGLGKVKSNVDSGVFQAIQEAGIAAL-NGPQEVVEELRKIYQERRDILVEGLRK 311

Query: 333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWL 390
           +  +     P+ +      +            EFA  L  +  V+VTPG   G   + + 
Sbjct: 312 LG-LEV-EPPKATFYVWAPVPKGY-----TSAEFATLLLDKAGVVVTPGNGFGEYGEGYF 364

Query: 391 RIAFCAEPSALKDGLGRMK 409
           RIA       +++ + R+K
Sbjct: 365 RIALTVPDERIEEAVERIK 383

Length = 385

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score = 86.7 bits (215), Expect = 1e-18
 Identities = 65/239 (27%), Positives = 102/239 (42%), Gaps = 34/239 (14%)

Query: 40  DPRPVVPLGYGDP--TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
             R ++ +G G+P  TA      A         A+R G    Y +  G+ P R AIA + 
Sbjct: 28  AGRDIIHMGIGEPDFTAPEPVVEAAAR------ALRRGVTQ-YTSALGLAPLREAIAAWY 80

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
           +R     ++ + + VT G   A+ +    L   G  VL+P P +P             RH
Sbjct: 81  ARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCN-----------RH 129

Query: 158 F--------DLLP---ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIA 206
           F         L+P      +++    VEA   + T  +++ +P NP G       L+ I 
Sbjct: 130 FVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIV 189

Query: 207 EMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
           E  R      + DE+Y  L++ + P + + L      VIT+ S SK + + GWR GWLV
Sbjct: 190 EAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDD---VITINSFSKYFNMTGWRLGWLV 245

Length = 388

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score = 86.6 bits (215), Expect = 1e-18
 Identities = 92/365 (25%), Positives = 134/365 (36%), Gaps = 83/365 (22%)

Query: 66  DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILS 125
            A+ +A      + Y    G+P  R A A + SR     +S + V++T GC QA    + 
Sbjct: 49  RALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMV 108

Query: 126 VLARPGANVLLPRPGWPYY---------EGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL 176
            LA  G  V+LP    P+Y          GI            LLP      D  A EAL
Sbjct: 109 TLAGAGDEVILPL---PWYFNHKMWLDMLGIRPVYLPCDEGPGLLP------DPAAAEAL 159

Query: 177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236
               T A+ ++ P NP G V+    L E+ ++AR+  + ++ DE Y    F S    P  
Sbjct: 160 ITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYR--DFDSGGGAPHD 217

Query: 237 LFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSD 291
           LF    P     ++ L S SK + + G R G +V   P  I +    +D++  C      
Sbjct: 218 LFAD--PDWDDTLVHLYSFSKSYALTGHRVGAVVA-SPARIAEIEKFMDTVAIC------ 268

Query: 292 IPTFIQGAIPQILEKTKEDFFCKLIDTLR-----ESAEIC--YDGVKEIPCISCPNKPEG 344
                   I QI            +  L        AEI    D  + +           
Sbjct: 269 -----APRIGQIA-------VAWGLPNLADWRAGNRAEIARRRDAFRAV----------- 305

Query: 345 SMVTMVKLNPWLLEDIN----------DDI---EFALKLAKEESVIVTPGIYVG--LKNW 389
                 +L  W L               D    E A +LAKE  ++  PG   G   + +
Sbjct: 306 ----FARLPGWELLASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGY 361

Query: 390 LRIAF 394
           LR+AF
Sbjct: 362 LRLAF 366

Length = 386

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 85.9 bits (213), Expect = 2e-18
 Identities = 95/411 (23%), Positives = 160/411 (38%), Gaps = 59/411 (14%)

Query: 29  LASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRS--GKFNCYATNSG 85
           LA+++  V     +P + L  G+P    P F         +++A+R      + Y T  G
Sbjct: 15  LAALLAGVTPPASKPPIALSIGEPKHPTPAF---------VLEALRENLHGLSTYPTTKG 65

Query: 86  IPPARRAIADYLSR--DLPYKLSADD-VYVTLGCKQAVEVILSVLARPG--ANVLLPRPG 140
           +P  R+AIA +L R  DLP  +  +  V    G ++A+      +  PG    V++P P 
Sbjct: 66  LPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPF 125

Query: 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200
           +  YEG A     E    +   E  +  D DAV     +    + + +PGNP G V +  
Sbjct: 126 YQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLD 185

Query: 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--------GSIVPVITLGSISK 252
            L+++ E+A +   ++ +DE Y  L F      P GL               +   S+SK
Sbjct: 186 TLKKLIELADQYGFIIASDECYSELYFDE-GNPPAGLLQAAAQLGRDDFRRCLVFHSLSK 244

Query: 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKEDF 311
           R  +PG R G+ V  D         I+ +     + +   +P   Q A        +   
Sbjct: 245 RSNLPGLRSGF-VAGDAE-------ILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQH-- 294

Query: 312 FCKLIDTLRESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALK 369
              + +      E  +  V EI    +     P+           W     +D+  FA  
Sbjct: 295 ---VRENRALYREK-FAAVLEILGQVLDLE-LPDAGFYL------WPKVPGDDE-AFARA 342

Query: 370 LAKEESVIVTPGIYVGL--------KNWLRIAFCAEPSALKDGLGRMKAFC 412
           L +EE+V V PG ++          +  +RIA  A      +   R+++F 
Sbjct: 343 LYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSFI 393

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 81.8 bits (202), Expect = 5e-17
 Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 33/340 (9%)

Query: 82  TNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPG 140
           T SGI     A+ +Y +      L+AD +V + +G +  +  +  V A PG  +L+P PG
Sbjct: 67  TLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPG 126

Query: 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV-EALADKNTAAMVIIN-PGNPCGNVFT 198
           +  YE   Q       +  L  E ++  DL+ + E +ADK  A M+I+N PGNP   +  
Sbjct: 127 YTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADK--AKMMILNFPGNPVPAMAH 184

Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTF-GSIPYTPMGLFGSIVPVITLGSISKRWLVP 257
               +E+   A+K  ++VV D  Y    F G+ P + + + G+    + + S+SK + + 
Sbjct: 185 EDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLA 244

Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF--IQGAIPQILEKTKEDFFC-- 313
           G R G+++ N+   I +      S        +D   F  IQ A    L       FC  
Sbjct: 245 GSRIGYMIGNEE--IVRALTQFKS-------NTDYGVFLPIQKAACAALRNGAA--FCEK 293

Query: 314 -KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAK 372
            + I   R    +  DG +        +KP GSM    +     +      + FA  L  
Sbjct: 294 NRGIYQERRDTLV--DGFRTFGWNV--DKPAGSMFVWAE-----IPKGWTSLSFAYALMD 344

Query: 373 EESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA 410
             +V+VTPG   G   + ++RIA   +   L+  +  ++ 
Sbjct: 345 RANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384

Length = 399

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 81.5 bits (202), Expect = 7e-17
 Identities = 90/389 (23%), Positives = 148/389 (38%), Gaps = 90/389 (23%)

Query: 24  TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN 83
           TV ++LA+   ++N         L  G    FP F       +A+  A+ +G  N Y   
Sbjct: 21  TVMSALAAEHGAIN---------LSQG----FPDFDGPPYLVEALAYAMAAG-HNQYPPM 66

Query: 84  SGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           +G+   R AIA   +R    +  AD ++ VT G  +A+   +  L RPG  V++  P + 
Sbjct: 67  TGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYD 126

Query: 143 YYE-------GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCG 194
            Y        G A R  ++   F         VD     A     T  ++I+N P NP G
Sbjct: 127 SYAPAIELAGGRAVRVALQPPDF--------RVDWQRFAAAISPRTR-LIILNTPHNPSG 177

Query: 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKR 253
            V++   ++ + ++     + V++DEVY H+ F    +  +     +      + S  K 
Sbjct: 178 TVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKT 237

Query: 254 WLVPGWRFGWLVTNDPNGI---FQK--------------SGIIDSIKDCLSIYSDIPTFI 296
           + V GW+ G+ V   P  +   F+K                + D ++     Y ++P F 
Sbjct: 238 YHVTGWKVGYCVA--PAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFY 295

Query: 297 QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356
           Q          K D F   +   R          K +PC       EG+         + 
Sbjct: 296 Q---------AKRDRFRAALANSR---------FKLLPC-------EGTY--------FQ 322

Query: 357 LEDIN-----DDIEFALKLAKEESVIVTP 380
           L D +     DD+EF   L +E  V   P
Sbjct: 323 LVDYSAISDLDDVEFCQWLTREHGVAAIP 351

Length = 386

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 97/413 (23%), Positives = 160/413 (38%), Gaps = 76/413 (18%)

Query: 29  LASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP 88
           L  ++  +  N     + L  G+P     F T    +DA+ +       N Y  ++G   
Sbjct: 11  LRELLKEITPNKEYKGLDLTIGEPQ----FETPKFIQDALKNNAHL--LNKYPKSAGEES 64

Query: 89  ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILS----VLAR-PGANVLLPRPGWPY 143
            R A   +  R    +L  +++  T G +   EV+ +    VL       +  P P +  
Sbjct: 65  LREAQRGFFKRRFKIELKENELIPTFGTR---EVLFNFPQFVLFDKQNPTIAYPNPFYQI 121

Query: 144 YEGIAQRKQVEVRHFDLLPERNWEVDLDAVE-ALADKNTAAMVIIN-PGNPCGNVFTYHH 201
           YEG A   + +V    L  E ++   L+  E    D     +VI+N P NP G   +   
Sbjct: 122 YEGAAIASRAKVLLMPLTKENDFTPSLNEKELQEVD-----LVILNSPNNPTGRTLSLEE 176

Query: 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-------VITLGSISKRW 254
           L E  ++A K   +++ DE Y  +   + P  P  L  SI+        V+ + SISKR 
Sbjct: 177 LIEWVKLALKHDFILINDECYSEIYENTPP--PSLLEASILVGNESFKNVLVINSISKRS 234

Query: 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKE----- 309
             PG R               SG I      L  Y    T++  A P  L+K        
Sbjct: 235 SAPGLR---------------SGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD 279

Query: 310 ----DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIE 365
               +FF        ++ ++     +EI  I+    P  +         WL   +++D E
Sbjct: 280 DEHAEFFRN---IYAKNLKL----AREILGIT---IPPATFYV------WL--PVDNDEE 321

Query: 366 FALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKAFCQR 414
           F  KL + E + V PG ++G     K ++RIA   +   L+  L  +K + + 
Sbjct: 322 FTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLEN 374

Length = 374

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 79.4 bits (196), Expect = 3e-16
 Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 26/328 (7%)

Query: 66  DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVIL 124
           + + +  +    + Y+T+ GIP  RRAI+ +        +  + +  VT+G K+ +  ++
Sbjct: 49  EKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLM 108

Query: 125 SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL-DAVEALADKNTAA 183
                 G  VL+P P +P +   A     +VR   L+   ++  +L  A+     K    
Sbjct: 109 LATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPK--PK 166

Query: 184 MVIIN-PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF-GSIPYTPMGLFGSI 241
           M+I+  P NP          +++  +A++  V+VV D  Y  + + G    + M + G+ 
Sbjct: 167 MMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAK 226

Query: 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF--IQGA 299
              +   ++SK + + GWR G++V N          ++ ++    S Y D  TF  +Q A
Sbjct: 227 DVAVEFFTLSKSYNMAGWRIGFMVGNPE--------LVSALARIKS-YHDYGTFTPLQVA 277

Query: 300 IPQILEKTKEDFFC--KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357
               LE  ++   C   + +  +   ++   G+ E   +     P+ SM    K+     
Sbjct: 278 AIAALEGDQQ---CVRDIAEQYKRRRDVLVKGLHEAGWMV--EMPKASMYVWAKIPEPYA 332

Query: 358 EDINDDIEFALKLAKEESVIVTPGIYVG 385
                 +EFA KL  E  V V+PGI  G
Sbjct: 333 A--MGSLEFAKKLLNEAKVCVSPGIGFG 358

Length = 395

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 78.5 bits (194), Expect = 6e-16
 Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 37/262 (14%)

Query: 80  YATNSGIPPARRAIADYLSRDLPYK-LSAD-DVYVTLGCKQAVEVILSVLARPGANVLLP 137
           YA N GI   + A A Y+ +    K +    +V  ++G K A+ ++ S    PG   L+ 
Sbjct: 78  YADN-GIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMT 136

Query: 138 RPGWP-------YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190
            PG+P       YY G       EV +  LL E N+  DLD++     +    + +  P 
Sbjct: 137 VPGYPVTGTHTKYYGG-------EVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPN 189

Query: 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250
           NP G V T    +E+ + A++  ++VV D  Y  LTF   P + + + G+    + + S+
Sbjct: 190 NPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSL 249

Query: 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF--IQGAI------PQ 302
           SK + + GWR  ++V N+   I +      ++KD     +D   F  IQ A       P+
Sbjct: 250 SKAYNMTGWRLAFVVGNEL--IVKAFA---TVKD----NNDSGQFIAIQKAGIYALDHPE 300

Query: 303 ILEKTKEDF---FCKLIDTLRE 321
           I EK +E +     KL+  L E
Sbjct: 301 ITEKIREKYSRRLDKLVKILNE 322

Length = 410

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 78.2 bits (193), Expect = 8e-16
 Identities = 100/388 (25%), Positives = 166/388 (42%), Gaps = 65/388 (16%)

Query: 47  LGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS 106
           LG G+P      +  +EA  A   A+   + + Y    G    R+AI D+  R    +L 
Sbjct: 40  LGMGNPDGAAP-QPVIEAAIA---ALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELD 95

Query: 107 AD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-YYEG--IAQRKQVEVRHFDLLP 162
            D +    LG K+ +  +      PG  VL+P P +P ++ G  IA     ++    L P
Sbjct: 96  PDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAG---AQIYPIILKP 152

Query: 163 ERNWEVDLDAV-EALADKNTAAMVIIN-PGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220
           E +W +DL ++ E +A +  A ++  N P NP          +EI   ARK  +M+V D 
Sbjct: 153 ENDWLIDLSSIPEEVAQQ--AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDL 210

Query: 221 VYGHLTFGSIPYTPMGLF---GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
            Y  L F    Y P  L    G+    +   ++SK + + GWR G++V N          
Sbjct: 211 CYAELAFDG--YQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN--------RH 260

Query: 278 IIDSIKDCLS-----IYSDIPTFIQGA-------IPQILEK--TKEDFFCKLIDTLRESA 323
           II  ++   +     I+S +    + A       + Q+ E+  T+ DF   LI  L    
Sbjct: 261 IIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDF---LIQGL---G 314

Query: 324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG-- 381
           E+ ++    IP        + +M   V     +        +FAL + ++  V+VTPG  
Sbjct: 315 ELGWN----IP------PTKATMYLWVPCPVGM-----GSTDFALNVLQKTGVVVTPGNA 359

Query: 382 IYVGLKNWLRIAFCAEPSALKDGLGRMK 409
              G + ++RI+  A+   L + L R+K
Sbjct: 360 FGEGGEGYVRISLIADCDRLGEALDRLK 387

Length = 394

>gnl|CDD|177996 PLN02368, PLN02368, alanine transaminase

 Score = 78.3 bits (193), Expect = 8e-16
 Identities = 94/365 (25%), Positives = 154/365 (42%), Gaps = 67/365 (18%)

Query: 41  PRPVV-----PLGYGDPTA---FPCFRTAVEAEDAIVDA-----VRSGKFNCYATNSGIP 87
           PR VV     P    DP     FP         DAI  A     + SG    Y+ + G+P
Sbjct: 59  PRQVVALCQAPFLLDDPNVGLLFP--------ADAIARAKHYLSLTSGGLGAYSDSRGLP 110

Query: 88  PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPYYEG 146
             R+ +A+++ R   Y    + +++T G  + V  IL+ + R     VL+P P +P Y  
Sbjct: 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA 170

Query: 147 IAQRKQVEVRHFDLLPERNWEVDLDAV-----EALADKNTA-AMVIINPGNPCGNVFTYH 200
                   +  + L    NW +D++ +     +A +   T  AMVIINPGNP G   +  
Sbjct: 171 TISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEA 230

Query: 201 HLQEIAEMARKLRVMVVADEVY------GHLTFGSIPYTPMGL---FGSIVPVITLGSIS 251
           +L+EI +   + R++++ DEVY          F S     M +       V +++  ++S
Sbjct: 231 NLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVS 290

Query: 252 K-RWLVPGWRFGWL-VTNDPNGIFQKSGIIDSIKDCLSI--YSDIPTFI----------Q 297
           K  W   G R G+  +TN P         ++ I    SI    ++   I           
Sbjct: 291 KGYWGECGQRGGYFEMTNIP------PKTVEEIYKVASIALSPNVSGQIFMGLMVNPPKP 344

Query: 298 GAI--PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTM--VKLN 353
           G I   Q + ++K      ++++LR  A +  DG      + C N  EG+M +   +KL 
Sbjct: 345 GDISYDQFVRESK-----GILESLRRRARMMTDGFNSCKNVVC-NFTEGAMYSFPQIKLP 398

Query: 354 PWLLE 358
           P  +E
Sbjct: 399 PKAIE 403

Length = 407

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 77.6 bits (192), Expect = 2e-15
 Identities = 99/407 (24%), Positives = 171/407 (42%), Gaps = 81/407 (19%)

Query: 47  LGYGDPTAFPCFRTAVEA--EDAIVDAVRSGKFN---C-YATNSGIPPARRAIADYLSRD 100
           LG G+P   P     +E    D + D + SGK       Y    G      A+A  L+  
Sbjct: 35  LGGGNPAHIP----EMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNER 90

Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-----VLLP-RPGWPYY--EGIAQRKQ 152
             + +S  ++ +T G + A   + ++ A   A+     +L P  P +  Y   G+ +   
Sbjct: 91  YGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLF 150

Query: 153 VEVR-HFDLLPER--NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
           V  R + +LLPE    + VD + +    D++T A+ +  P NP GNV T   L+++  +A
Sbjct: 151 VSYRPNIELLPEGQFKYHVDFEHLHI--DEDTGAICVSRPTNPTGNVLTDEELEKLDALA 208

Query: 210 RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG-SISKRWLVPGWRFGWLVTND 268
           R+  + ++ D  YG   F  I ++      +  P I L  S+SK  L PG R G ++ ++
Sbjct: 209 RQHNIPLLIDNAYG-PPFPGIIFSEATPLWN--PNIILCMSLSKLGL-PGVRCGIVIADE 264

Query: 269 PNGIFQKSGIIDSIKDCLSIYSDIPTFI----------QGAIPQILEKTKEDFFCK---- 314
                    II+++ +   I S  P  +           G + ++ E     F+ +    
Sbjct: 265 E--------IIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQL 316

Query: 315 LIDTLRESAEICYDGVKEIPC-ISCPNKPEGSMVTMVKLNPWL-LED--INDDIEFALKL 370
            I  LR           + PC I   +KPEG++        WL  +D  I  + E   +L
Sbjct: 317 AIALLRRYLP-------DEPCLI---HKPEGAIFL------WLWFKDLPITTE-ELYQRL 359

Query: 371 AKEESVIVTPGIY--VGLK-NW------LRIAFCAEPSALKDGLGRM 408
            K   V+V PG Y   GL  +W      +R+ +  +   ++ G+  +
Sbjct: 360 -KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAIL 405

Length = 416

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 75.2 bits (185), Expect = 9e-15
 Identities = 69/246 (28%), Positives = 106/246 (43%), Gaps = 21/246 (8%)

Query: 24  TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN 83
           TV   LA+  D++N         L  G P  F      VE    +  A+R G  N YA  
Sbjct: 20  TVIGQLAAQHDALN---------LSQGAPN-FAPDPALVEG---VARAMRDGH-NQYAPM 65

Query: 84  SGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           +GI   R A+A+   R    +     +V V     + +   +S L  PG  V+   P + 
Sbjct: 66  AGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFD 125

Query: 143 YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGNVFTYHH 201
            Y  I + +        L PE  + V+ D V A     T  M+I+N P NP   VF+   
Sbjct: 126 SYAPIVRLQGATPVAIKLSPED-FRVNWDEVAAAITPRTR-MIIVNTPHNPSATVFSAAD 183

Query: 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV--PVITLGSISKRWLVPGW 259
           L  +A++ R   +++++DEVY H+ F    +  M     +    VI + S  K + V GW
Sbjct: 184 LARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVI-VSSFGKSYHVTGW 242

Query: 260 RFGWLV 265
           R G+ +
Sbjct: 243 RVGYCL 248

Length = 384

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 72.5 bits (178), Expect = 5e-14
 Identities = 69/239 (28%), Positives = 96/239 (40%), Gaps = 35/239 (14%)

Query: 41  PRPVVPLGYG---DPTAFPCFRTA-VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY 96
           P  +V L  G   DP   P  R A   A DA            Y    G P  R AI D+
Sbjct: 20  PDGIVDLSVGTPVDPVP-PLIRAALAAAADA----------PGYPQTWGTPELREAIVDW 68

Query: 97  LSRDLPYK-LSADDVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWPYYEGIAQRKQVE 154
           L R      L    V   +G K+ V  + ++L   PG  V++P   +P YE  A      
Sbjct: 69  LERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGAT 128

Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGNVFTYHHLQEIAEMARKLR 213
               D   E      LD V          ++ +N PGNP G V +   L+ I   AR+  
Sbjct: 129 PVAADDPTE------LDPV-------GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERG 175

Query: 214 VMVVADEVYGHLTFGSIPYT---PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
            +V +DE Y  L +   P +   P    G    ++ + S+SKR  + G+R G+ V  DP
Sbjct: 176 AVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGF-VAGDP 233

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 72.2 bits (178), Expect = 7e-14
 Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 28/251 (11%)

Query: 29  LASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87
           L ++   V      P + L  G+P    P F      +DA+   +       Y T +G+P
Sbjct: 16  LRALFAGVTPPADLPPISLSIGEPKHPTPAF-----IKDALAANL--DGLASYPTTAGLP 68

Query: 88  PARRAIADYLSR--DLPYKLSADDVYVTLGCKQAV-----EVILSVLARPGANVLLPRPG 140
             R AIA +L R   LP    A  V    G ++A+      VI      PG  V+ P P 
Sbjct: 69  ALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDR--DGPGPLVVCPNPF 126

Query: 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200
           +  YEG A     E    +  P  N+  D DAV A     T  + + +PGNP G V    
Sbjct: 127 YQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLD 186

Query: 201 HLQEIAEMARKLRVMVVADEVYGHLTF-GSIPYTPMGLF--------GSIVPVITLGSIS 251
             +++  ++ +   ++ +DE Y  + F  + P  P+GL              ++   S+S
Sbjct: 187 DWKKLFALSDRYGFVIASDECYSEIYFDEAAP--PLGLLEAAAELGRDDFKRLVVFHSLS 244

Query: 252 KRWLVPGWRFG 262
           KR  VPG R G
Sbjct: 245 KRSNVPGLRSG 255

Length = 396

>gnl|CDD|177876 PLN02231, PLN02231, alanine transaminase

 Score = 71.1 bits (174), Expect = 3e-13
 Identities = 78/350 (22%), Positives = 157/350 (44%), Gaps = 32/350 (9%)

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
           A+E    I+D +       Y+ + GI   R AIA  +     +    +D+++T G   AV
Sbjct: 145 AIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAV 204

Query: 121 EVILSVLARPGAN-VLLPRPGWPYYEG-IAQRKQVEVRHFDLLPERNWEVDLDAVEA-LA 177
            +++ +L R   + +L P P +P Y   IA      V ++ L     W +++  ++  L 
Sbjct: 205 HMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYY-LDEATGWGLEISELKKQLE 263

Query: 178 DKNTA-----AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-------- 224
           D  +      A+V+INPGNP G V    + ++I E  ++  ++++ADEVY          
Sbjct: 264 DARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKK 323

Query: 225 -LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-GWRFGWL-VTNDPNGIFQKSGIIDS 281
             +F  +  + MG     + +++  S+SK +    G R G++ VT   + + ++   + S
Sbjct: 324 FHSFKKVARS-MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS 382

Query: 282 IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCK---LIDTLRESAEICYDGVKEIPCISC 338
           +  C +I   I   +  + P+  +++ E +  +   ++ +L   A+   D +  +  ++C
Sbjct: 383 VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTC 442

Query: 339 PNKPEGSMVTMVKLN-------PWLLEDINDDIEFALKLAKEESVIVTPG 381
            NK EG+M    +++                D  +  +L     ++V PG
Sbjct: 443 -NKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPG 491

Length = 534

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 69.2 bits (170), Expect = 8e-13
 Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 18/247 (7%)

Query: 30  ASIIDSVNK--NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87
           AS++  VNK   +   V+ LG G+P   P     VEA   + +A  +   + Y+   G P
Sbjct: 18  ASLVAKVNKKVAEGHDVINLGQGNPDQ-PTPEHIVEA---LQEAAENPANHKYSPFRGYP 73

Query: 88  PARRAIADYLSRDLPYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-Y 143
             + A AD+  R+  Y ++ D   +V +  G K  +  +   L  PG  +L+P PG+P Y
Sbjct: 74  FLKEAAADFYKRE--YGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDY 131

Query: 144 YEGIAQRKQVEVRHFDLLPERNWEVDLDAV-EALADKNTAAMVIIN-PGNPCGNVFTYHH 201
             G+A  +  +     L+ E N+  D   + E +A+K  A ++ +N P NP G V T   
Sbjct: 132 LSGVALAR-AQFETMPLIAENNFLPDYTKIPEEVAEK--AKLMYLNYPNNPTGAVATKAF 188

Query: 202 LQEIAEMARKLRVMVVADEVYGHLTF-GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260
            +E    A+K  + VV D  YG + F G  P + +   G+    I L ++SK + + GWR
Sbjct: 189 FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWR 248

Query: 261 FGWLVTN 267
             + V N
Sbjct: 249 VAFAVGN 255

Length = 389

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 34/342 (9%)

Query: 66  DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVIL 124
           D + +  +  + + Y+ + GIP  RRA A Y +R    KL+ D  V  TLG K+    + 
Sbjct: 50  DKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMA 109

Query: 125 SVLARPGANVLLPRPGWPYYE-GIAQRKQVEVRHFDLLPERNWEVDLD-AVEALADKNTA 182
             +  PG  +L P P +P +  G      V +R     P+  +   L+ AV     K   
Sbjct: 110 QAITAPGDVILCPNPSYPIHAFGFIMAGGV-IRSVPAEPDEEFFPALERAVRHSIPKPI- 167

Query: 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP--MGLFGS 240
           A+++  P NP   V      +++   A+K  +++++D  Y  + F   P  P  + + G+
Sbjct: 168 ALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNP-PPSVLQVPGA 226

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF--IQG 298
               +   S+SK + + GWR G+ V N+         +I ++    S Y D   F  IQ 
Sbjct: 227 KDVTVEFTSMSKTFSMAGWRMGFAVGNER--------LIAALTRVKS-YLDYGAFTPIQV 277

Query: 299 AIPQILEKTKEDFFCKLIDTLRESAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNP 354
           A    L    +D   ++ +  ++  ++  +       +IP       P  SM     + P
Sbjct: 278 AATAAL-NGPQDCIAEMRELYKKRRDVLVESFGRAGWDIP------PPAASMFAWAPI-P 329

Query: 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGLK--NWLRIAF 394
                +   +EF+  L ++  V V PG+  G     ++RIA 
Sbjct: 330 EAFRHLG-SLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL 370

Length = 405

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 67.7 bits (166), Expect = 2e-12
 Identities = 38/187 (20%), Positives = 82/187 (43%), Gaps = 9/187 (4%)

Query: 89  ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA 148
              A+ ++L++   +++  + +    G   ++   +  L  PG  V++  P +P +    
Sbjct: 65  LYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRALTAPGEGVIVQTPVYPPFLSAV 124

Query: 149 QRKQVEVRHFDLLP-ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207
           +    E+    L      +  DL+ +E    +    +++ +P NP G V+T   L  +AE
Sbjct: 125 KSNGRELVLNPLKLDPGRYRFDLEDLEDAITEKARLLLLCSPHNPVGRVWTREELTRLAE 184

Query: 208 MARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWRFG 262
           +  +  V+VV+DE++  L +    + P     S+ P      +TL S  K + + G    
Sbjct: 185 LCLRHNVVVVSDEIHADLVYPPNKHIP---LASLSPEIAERTVTLLSPGKTFNIAGLNIS 241

Query: 263 WLVTNDP 269
           + +  +P
Sbjct: 242 FAIIPNP 248

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 66.1 bits (161), Expect = 7e-12
 Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 12/221 (5%)

Query: 48  GYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA 107
           G GDP       T      A++DAV   + + Y +  G    R AI+ +  R    KL  
Sbjct: 6   GTGDPKE----PTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDP 59

Query: 108 D-DVYVTLGCKQAVEVILSVLARPGAN---VLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163
           D  V  + G K+A+     V   P  +   V+   PG+P YE  A     E     L  E
Sbjct: 60  DAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKE 119

Query: 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223
             + + L+ VE    + T  + I  P NP G      +L+E   M R+  +++ +DE Y 
Sbjct: 120 DGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYT 179

Query: 224 HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264
            + FG  P     L   I  V+   S+SKR  + G+R G++
Sbjct: 180 EIYFGEPP--HSALEVGIENVLAFHSLSKRSGMTGYRSGFV 218

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 64.2 bits (157), Expect = 3e-11
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 30/225 (13%)

Query: 51  DPTAFPCFRTA-VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY-KLSAD 108
           DP   P  + A   A DA       G    Y T +G P  R AI  +L+R      L   
Sbjct: 39  DPVP-PVIQEALAAAADA------PG----YPTTAGTPELREAIVGWLARRRGVTGLDPA 87

Query: 109 DVYVTLGCKQAVEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167
            V   +G K+ V  + ++L   PG  V++P   +P YE  A+     V            
Sbjct: 88  AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATV------------ 135

Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF 227
           V  D++  L  +  A + + +P NP G V    HL+++   AR+   +V +DE Y  L +
Sbjct: 136 VRADSLTELGPQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGW 195

Query: 228 GSIPYT---PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
            + P +   P    G    ++ + S+SK+  + G+R G+ V  DP
Sbjct: 196 DAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGF-VAGDP 239

Length = 364

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 64.1 bits (156), Expect = 4e-11
 Identities = 87/362 (24%), Positives = 156/362 (43%), Gaps = 52/362 (14%)

Query: 85  GIPPARRAIADYLS--RDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           G+   R+A+A ++   R    +   D + +T G   A E++  +LA PG  +L+P P   
Sbjct: 96  GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTP--- 152

Query: 143 YYEGIAQ----RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM-------VIINPGN 191
           YY G  +    R  V++         N++V   A+EA A +   A        +I NP N
Sbjct: 153 YYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEA-AYQEAEAANIRVRGVLITNPSN 211

Query: 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-------GLFGSIVPV 244
           P G       L++I +   +  + +V+DE+Y    F +  +  +       G  G    V
Sbjct: 212 PLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERV 271

Query: 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL 304
             + S+SK   +PG+R G         I+  +  + +    +S ++ + +  Q  +  +L
Sbjct: 272 HIVYSLSKDLGLPGFRVG--------TIYSYNDKVVTTARRMSSFTLVSSQTQHLLASML 323

Query: 305 EKTKEDFFCKLIDT----LRESAEICYDGVKE--IPCISCPNKPEGSMVTMVKLNPWLLE 358
             + E+F    I T    LR+  E+   G++   I C+    K    +   + L+P LLE
Sbjct: 324 --SDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECL----KGNAGLFCWMNLSP-LLE 376

Query: 359 DINDDIEFAL--KLAKEESVIVTPG--IYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC 412
               + E AL   + +E  + ++PG   +     W R+ F   +E + L+  L R+  F 
Sbjct: 377 TPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDT-LEVALKRIHRFM 435

Query: 413 QR 414
            R
Sbjct: 436 DR 437

Length = 447

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 33/245 (13%)

Query: 63  EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122
           E ++ I + ++   FN Y  +    P R AIA++      Y L A+++ V  G  + +  
Sbjct: 35  ELKEEIFEELKRVPFNRYP-HITSDPLREAIAEF------YGLDAENIAVGNGSDELISY 87

Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA 182
           ++ +    G ++++  P +  Y   A+   + V    L  + ++ +D + +   A KN +
Sbjct: 88  LVKLFE--GKHIVITPPTFGMYSFYAKLNGIPVIDVPL--KEDFTIDGERIAEKA-KNAS 142

Query: 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPMGLFGS 240
           A+ I +P NP GN      LQ   E+ + L     VV DE Y   +  S+    +GL   
Sbjct: 143 AVFICSPNNPTGN------LQPEEEILKVLETGKPVVLDEAYAEFSGKSL----IGLIDE 192

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
              +I L + SK + + G R G+ + N          IID++      +S +       +
Sbjct: 193 YPNLILLRTFSKAFGLAGIRAGYAIAN--------EEIIDALYRIKPPFS-LNILTMKIV 243

Query: 301 PQILE 305
              L+
Sbjct: 244 RLALD 248

Length = 337

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 61.3 bits (149), Expect = 3e-10
 Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 35/272 (12%)

Query: 4   GAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGY--GDPTAFPCFRTA 61
           G +N  G E +Q                 ++++ + +P P  P+ +  GD  A      A
Sbjct: 12  GTDNAPGQEVRQSAAG-------------LEALLRGEPLPGRPVDFSHGDVDAHEPTPGA 58

Query: 62  VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAV 120
            E        V  G    Y    G    R  +A  L+      + A D++ +T G + A+
Sbjct: 59  FEL---FSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGAL 115

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP--------ERNWEVDLDA 172
            + ++     G  V + +P +      A RK VE    +++P        ++   +DLD 
Sbjct: 116 FLAVAATVARGDKVAIVQPDY-----FANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQ 170

Query: 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232
           +E          +  NP NP G V++   + +IA +AR+    V+ D++Y  L +    Y
Sbjct: 171 LEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSY 230

Query: 233 TPMGLFGSIVP--VITLGSISKRWLVPGWRFG 262
           T +     I P  VIT+   SK   + G+R G
Sbjct: 231 THLRALP-IDPENVITIMGPSKTESLSGYRLG 261

Length = 405

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 61.3 bits (149), Expect = 3e-10
 Identities = 94/404 (23%), Positives = 169/404 (41%), Gaps = 69/404 (17%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP----PARRAIADYLSR 99
            + LG G+P   P      +  D + + + SGK      N   P        A+A  L R
Sbjct: 32  AIMLGGGNPARIPEMDDYFQ--DLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRR 89

Query: 100 DLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-----VLLPRPGWPYYEGIAQRKQVE 154
           +  + ++A ++ +T G + A   + ++ A   ++     +LLP    P Y G A    +E
Sbjct: 90  EYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLA--PEYIGYAD-AGLE 146

Query: 155 VRHF-------DLLPER--NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
              F       +LLP     + VD + +     ++T A+ +  P NP GNV T   L ++
Sbjct: 147 EDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GESTGAICVSRPTNPTGNVLTDEELAKL 204

Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL-GSISKRWLVPGWRFGWL 264
             +AR+  + ++ D  YG + F  I ++      +    I L  S+SK  L PG R G +
Sbjct: 205 DALARQHGIPLIIDNAYG-VPFPGIIFSDATPLWN--ENIILCMSLSKLGL-PGSRCGII 260

Query: 265 VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFI----------QGAIPQILEKTKEDFFCK 314
           + N+         +I +I +   I S  P  +           G + ++ E+    F+  
Sbjct: 261 IANEK--------VIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFY-- 310

Query: 315 LIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL-LEDINDDIEFALKLAKE 373
             + ++ +  I    + E  C+   +KPEG++        WL  +D+    E   +  K 
Sbjct: 311 -RNRVQTTIAILRRYLPEYRCLI--HKPEGAIFL------WLWFKDLPITTEELYQRLKA 361

Query: 374 ESVIVTPGIY--VGL-KNW------LRIAFCAEPSALKDGLGRM 408
             V++ PG Y   GL K W      +R+ +  EP  ++ G+  +
Sbjct: 362 RGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAIL 405

Length = 417

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 62/306 (20%), Positives = 131/306 (42%), Gaps = 32/306 (10%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI-LSVLARPGANVLLPRPGWPYYEGIA 148
           R+ IA +       +L  ++V +  G   A E+I   V       VL+  P +  YE   
Sbjct: 60  RKRIASF------EQLDLENVILGNG---ATELIFNIVKVTKPKKVLILAPTFAEYERAL 110

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
           +    E+ + +L  E N+  +   +E +  +    + + NP NP G + +   +++I + 
Sbjct: 111 KAFDAEIEYAELTEETNFAANEIVLEEI-KEEIDLVFLCNPNNPTGQLISKEEMKKILDK 169

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
             K  + ++ DE +      +   + +    +   +I + + +K + +PG R G+ +T++
Sbjct: 170 CEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229

Query: 269 PNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328
            N    +   +  +++  S    I TF   A   +L+    ++  K I  ++E  +  Y+
Sbjct: 230 KN--LAE--KLLQMREPWS----INTFADLAGQTLLDDK--EYIKKTIQWIKEEKDFLYN 279

Query: 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-K 387
           G+ E   I    KP  + +            +   I+   +L K+  +I +   Y GL +
Sbjct: 280 GLSEFKGIK-VYKPSVNFI---------FFKLEKPIDLRKELLKKGILIRSCSNYRGLDE 329

Query: 388 NWLRIA 393
           N+ R+A
Sbjct: 330 NYYRVA 335

Length = 354

>gnl|CDD|236316 PRK08636, PRK08636, aspartate aminotransferase; Provisional

 Score = 57.8 bits (140), Expect = 4e-09
 Identities = 85/355 (23%), Positives = 149/355 (41%), Gaps = 53/355 (14%)

Query: 66  DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVIL 124
           D + ++ +  K + Y+ + GI   R AI ++  R     L  + +V  T+G K+    ++
Sbjct: 53  DKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLV 112

Query: 125 SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA----VEALADKN 180
             +  PG   ++P P +P +          V    L    ++E+D D     +E    ++
Sbjct: 113 QAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRES 172

Query: 181 T--AAMVIIN-PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMG 236
           +     V++N P NP          + +  +A+K R  +++D  Y  +TF    Y TP  
Sbjct: 173 SPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG--YKTP-- 228

Query: 237 LFGSIVPV-------ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY 289
              SI+ V       +   ++SK + + GWR G++V N      +  G +  IK  L   
Sbjct: 229 ---SILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK-----KLVGALKKIKSWL--- 277

Query: 290 SDIPTF--IQGAIPQILEKTKEDFFC--KLIDTLRESAEICYDGVK----EIPCISCPNK 341
            D   F  IQ A    L+    D  C  ++ +T R+  ++  +       E+       K
Sbjct: 278 -DYGMFTPIQVAATIALD---GDQSCVEEIRETYRKRRDVLIESFANAGWEL------QK 327

Query: 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAF 394
           P  SM    K+ P     +   +EF+ +L  E  V V+PGI  G     ++RIA 
Sbjct: 328 PRASMFVWAKI-PEPARHLG-SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIAL 380

Length = 403

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 58.2 bits (140), Expect = 4e-09
 Identities = 81/368 (22%), Positives = 148/368 (40%), Gaps = 54/368 (14%)

Query: 85  GIPPARRAIADYLSRDLPYKLSADDVYVTL--GCKQAVEVILSVLARPGANVLLPRPGWP 142
           G+   R+AIA ++ +    K++ D   V +  G   A E I+  LA PG   L+P P + 
Sbjct: 95  GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYA 154

Query: 143 YYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVE------ALADKNTAAMVIINPGNPCGN 195
            ++  +  R  VE+         N+++ +DA +        ++K    +++ NP NP G 
Sbjct: 155 AFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214

Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT--------- 246
           +     L  +     +  + +V DE+Y    F        G F S+  V+          
Sbjct: 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG------GDFVSVAEVVNDVDISEVNV 268

Query: 247 -----LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQG 298
                + S+SK   +PG+R G + + +           DS+  C   +S +  + +  Q 
Sbjct: 269 DLIHIVYSLSKDMGLPGFRVGIVYSFN-----------DSVVSCARKMSSFGLVSSQTQL 317

Query: 299 AIPQILEKTK--EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356
            +  +L   +  ++F  +    L    ++   G+K+   I+C     G    M   +  L
Sbjct: 318 MLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKAD-IACLTSNAGLFAWMDLRH--L 374

Query: 357 LEDIN---DDIEFALKLAKEESVIVTPG--IYVGLKNWLRIAFC-AEPSALKDGLGRMKA 410
           L D N    +IE    +  +  + V+PG         W RI F   +   L   LGR++ 
Sbjct: 375 LRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQD 434

Query: 411 FCQRHTKK 418
           F  ++  K
Sbjct: 435 FVSKNKNK 442

Length = 496

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 57.1 bits (138), Expect = 7e-09
 Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 8/184 (4%)

Query: 88  PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI 147
           P  RA+ + ++      + AD + +  G +  + VI   + RPG  V+   P +P +E  
Sbjct: 71  PQGRALREAIAAR--TGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDY 128

Query: 148 AQRKQVEVRHFDLLPERNWEVDLDA-VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIA 206
                  V    + P+     DLDA   A+A      M   NP NP G+  T   L  + 
Sbjct: 129 PTMMGARVERVTVTPD--LGFDLDALCAAVARAPRMLM-FSNPSNPVGSWLTADQLARVL 185

Query: 207 EMARKLRVMVVADEVYGHLTFG-SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
           +      ++VV DE Y     G   P     L    +P I L + SK + + G R G+ +
Sbjct: 186 DATPPETLIVV-DEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL 244

Query: 266 TNDP 269
            +DP
Sbjct: 245 VSDP 248

Length = 371

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 56.4 bits (137), Expect = 9e-09
 Identities = 45/182 (24%), Positives = 65/182 (35%), Gaps = 31/182 (17%)

Query: 89  ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI-LSVLARPGANVLLPRPGWPYYEGI 147
            R A A Y      Y L A  V    G   A E I L         VL+  P +  Y   
Sbjct: 52  LRAAAAAY------YGLPAASVLPVNG---AQEAIYLLPRLLAPGRVLVLAPTYSEYARA 102

Query: 148 AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207
            +    EV             DLD + A  ++     V+ NP NP G +     L  +A 
Sbjct: 103 WRAAGHEVVELP---------DLDRLPAALEEADLL-VVCNPNNPTGRLIPPETLLALAA 152

Query: 208 MARKLRVMVVADEVYGHLTFGSIPYTP----MGLFGSIVPVITLGSISKRWLVPGWRFGW 263
             R     +V DE +       I +TP             ++ L S++K + + G R G+
Sbjct: 153 RLRARGGWLVVDEAF-------IDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGF 205

Query: 264 LV 265
           +V
Sbjct: 206 VV 207

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 13/178 (7%)

Query: 92  AIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRK 151
           A+AD         +S + V++  G   A++ +   +  PG  VL+P PG+ YY   A+  
Sbjct: 73  ALADRWD------VSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYH 126

Query: 152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV-IINPGNPCGNVFTYHHLQEIAEMAR 210
             EVR + +    ++E   D V  L   +   +V + +P NP G+      ++ +AE   
Sbjct: 127 HGEVREYPVSKADDFEQTADTV--LDAYDGERIVYLTSPHNPTGSEIPLDEVEALAERTD 184

Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
           +   +VV DE YG   F   P + + L      V  L + SK + + G R G+ V  +
Sbjct: 185 E-ETLVVVDEAYGE--FAERP-SAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE 238

Length = 357

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 31/245 (12%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEA-EDAIVDAVRSGKFNCYATNSGIPPARRAIA-- 94
           KN    ++ LG GD T  P   + +EA  +A+ +      F  Y    G P  R AIA  
Sbjct: 29  KNPSADIIRLGIGDTTQ-PLPASVIEAFHNAVDELASPETFRGYGPEQGYPFLREAIAEN 87

Query: 95  DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY------EGIA 148
           DY  R     +  ++++++ G K  V  + S+   P   V +  P +P Y       G A
Sbjct: 88  DYRGR-----IDPEEIFISDGAKCDVFRLQSLF-GPDNTVAVQDPVYPAYLDSNVMAGRA 141

Query: 149 QRKQVEVRHFDL-----LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ 203
                + R+  +       E N+  +L       + +   + + +P NP G V T   L+
Sbjct: 142 GVLDDDGRYSKITYLPCTAENNFIPELPE-----EPHIDIIYLCSPNNPTGTVLTKEQLK 196

Query: 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---GSIVPVITLGSISKRWLVPGWR 260
           E+ + A +   +++ D  Y    F S P  P  +F   G+    I   S SK     G R
Sbjct: 197 ELVDYANEHGSLILFDAAYS--AFISDPSLPHSIFEIPGARFCAIEFRSFSKTAGFTGVR 254

Query: 261 FGWLV 265
            GW V
Sbjct: 255 LGWTV 259

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 54.8 bits (133), Expect = 3e-08
 Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 18/109 (16%)

Query: 123 ILSVLAR----PGANVLLPRPGWPYYEGIAQR---KQVEVRHFDLLPERNWEVDLDAVEA 175
           IL +LAR    PG  V+    G+  Y   AQ    K VEV      P +++  DLDA+ A
Sbjct: 96  ILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEV------PAKDYGHDLDAMLA 149

Query: 176 LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVVADEVY 222
                T  + I NP NP G   TY   +E+      +   V+VV DE Y
Sbjct: 150 AVTPRTRLVFIANPNNPTG---TYLPAEEVERFLAGVPPDVLVVLDEAY 195

Length = 367

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 21/203 (10%)

Query: 68  IVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL 127
           I + V+S + N Y   +     R  +A Y S      +   +++V  G  + + +I+   
Sbjct: 44  IQEIVKSSQVNIYPDPTAEK-LREELARYCS------VVPTNIFVGNGSDEIIHLIMLAF 96

Query: 128 ARPGANVLLPRPG---WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184
              G  V+ P P    +  Y  IA   ++ V+   L  +  ++V    ++ +       +
Sbjct: 97  INKGDVVIYPHPSFAMYSVYSKIAGAVEIPVK---LKEDYTYDVG-SFIKVIEKYQPKLV 152

Query: 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244
            + NP NP G+V     + +I E +R +   VV DE Y    +G+   T + +      +
Sbjct: 153 FLCNPNNPTGSVIEREDIIKIIEKSRGI---VVVDEAYFEF-YGN---TIVDVINEFENL 205

Query: 245 ITLGSISKRWLVPGWRFGWLVTN 267
           I L ++SK + + G R G+ V N
Sbjct: 206 IVLRTLSKAFGLAGLRVGYAVAN 228

Length = 351

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 52.7 bits (127), Expect = 2e-07
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           R  +A +L       +  + +    G  + +++I   L  PG N ++  P +  Y   A 
Sbjct: 70  RTKVAKHL------GVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAI 123

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
            +  EVR    +P ++   DL+A+    D+ T  + I NP NP G    +  L    E  
Sbjct: 124 IEGAEVRE---VPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESV 180

Query: 210 RKLRVMVVADEVY 222
               V+VV DE Y
Sbjct: 181 PS-HVLVVLDEAY 192

Length = 359

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 10/183 (5%)

Query: 83  NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           + G    R+ IA+ L       +  + V    G  + +++I   + + G N++     +P
Sbjct: 63  DGGATTLRQTIANKL------HVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFP 116

Query: 143 YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL 202
            Y   A  +  EV+    +   N   DLD + ++ D +T  + I NP NP G       L
Sbjct: 117 QYRHHAIIEGCEVKE---VALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKL 173

Query: 203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG 262
            +  E   +  ++V+ +  Y ++T    P T + L      ++ L + SK + +  +R G
Sbjct: 174 TQFIEGISENTLIVIDEAYYEYVTAKDFPET-LPLLEKHKNILVLRTFSKAYGLASFRVG 232

Query: 263 WLV 265
           + V
Sbjct: 233 YAV 235

Length = 366

>gnl|CDD|178069 PLN02450, PLN02450, 1-aminocyclopropane-1-carboxylate synthase

 Score = 50.5 bits (121), Expect = 9e-07
 Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 36/211 (17%)

Query: 85  GIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           G+P  + A+A+++S     K++ D   + +T G   A E ++  LA PG   LLP P   
Sbjct: 87  GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTP--- 143

Query: 143 YYEGIAQ----RKQVEVRHFDLLPERNWEVDLDAVEAL---ADK---NTAAMVIINPGNP 192
           YY G  +    R  VE+          +++   A+E     A K       ++I NP NP
Sbjct: 144 YYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNP 203

Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI------- 245
            G   T   L  + +      + +++DE+Y    F S    P   F S++ V+       
Sbjct: 204 LGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDS----PG--FVSVMEVLKDRKLEN 257

Query: 246 --------TLGSISKRWLVPGWRFGWLVTND 268
                    + S+SK   +PG+R G + +ND
Sbjct: 258 TDVSNRVHIVYSLSKDLGLPGFRVGAIYSND 288

Length = 468

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 50.3 bits (121), Expect = 1e-06
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 128 ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV-EALADKNTAAMVI 186
           A+PGA VL P PG+  Y   A+   +E     L  +  + +DL A+  A+A+   A + +
Sbjct: 102 AKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD--FTLDLPAMLAAIAEHRPALVFL 159

Query: 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222
             P NP GN+F    ++ I E A  L   VV DE Y
Sbjct: 160 AYPNNPTGNLFDDADVERIIEAAPGL---VVVDEAY 192

Length = 356

>gnl|CDD|216267 pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 26/121 (21%)

Query: 119 AVEVILSVLARPGANVLLPRPGWPYYEG-------IAQRKQVEVRHFDLLPERNWEVDLD 171
           A+   L  L + G +V+        Y G       +  R  +EV   D         DLD
Sbjct: 79  AIFAALLALLKAGDHVVATDD---LYGGTYRLFEKVLPRFGIEVTFVDPS-------DLD 128

Query: 172 AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231
           A+EA    NT A+ +  P NP   V     ++ IA++A+K   +VV D      TF S P
Sbjct: 129 ALEAAIKPNTKAVFLETPTNPLLKV---VDIEAIAKIAKKHGALVVVDN-----TFAS-P 179

Query: 232 Y 232
           Y
Sbjct: 180 Y 180

This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. Length = 382

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 28/167 (16%)

Query: 119 AVEVILSVLARPGANVLLPR------PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172
             E I +V      + L PR      PG+  Y    Q+   E+R + L     W++    
Sbjct: 81  ETESIFAV-----VSGLKPRRAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAI 135

Query: 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232
           +EAL       + +  P NP G +     LQ IAE  + L + ++ DE +  + F  IP 
Sbjct: 136 LEALTPD-LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAF--IDF--IPD 190

Query: 233 TPMGLFGSIVPVIT-------LGSISKRWLVPGWRFGWLVTNDPNGI 272
                    +P +        L S++K + +PG R G+LV +D   +
Sbjct: 191 ET-----GFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAV 232

Length = 356

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 49.6 bits (119), Expect = 2e-06
 Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 15/156 (9%)

Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDV---YVTLGCKQAVEVILSVLARPGANVLL 136
           YA   GIP  R    + + R+ P  LS   +    VT      + ++  +    G  VLL
Sbjct: 40  YAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLL 98

Query: 137 PRPGWPYYEGI-AQRKQVEVRHFDLLPERNWEVDLDA-VEAL--ADKNTAAMVIIN-PGN 191
           P   W  Y+     R+  E+  + +  E +   D DA  EAL  A      +VI+N P N
Sbjct: 99  PDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPNN 157

Query: 192 PCGNVFTYHHLQEIAEMARKL-----RVMVVADEVY 222
           P G   T      I E  ++L     +V+ V D+ Y
Sbjct: 158 PTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAY 193

Length = 388

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 16/180 (8%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVT-LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA 148
           R A++ Y        +  +++ V   G  + ++ ++     PG  V++P P + YYE  A
Sbjct: 75  REALSKY------TGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISA 128

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
           +    +  +     E ++ +D+D+V     + T  + +  P NP GN+     +++I E 
Sbjct: 129 KAHGAKPVY--AKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILE- 185

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
                 +V  DE Y  + F    YTP  L      +I   + SK + + G R G+    +
Sbjct: 186 --STDALVFVDEAY--VEFAEYDYTP--LALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE 239

Length = 361

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 22/144 (15%)

Query: 142 PYYEGIAQ--RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
           PY E I +  R  +EV H +   E  W+     +E L D +  A+ ++NP NP     + 
Sbjct: 202 PYLE-IPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSD 260

Query: 200 HHLQEIAEMARKLR--VMVVADEVYGHLTFG----SIPYTPMGLFGSIVPVITLG--SIS 251
             L++IA++  + R  +M++ D+VYG  TF     S+         +++P  T+   S S
Sbjct: 261 ESLEKIADIVNEKRPDLMIITDDVYG--TFVDDFRSL--------FAVLPYNTILVYSFS 310

Query: 252 KRWLVPGWRFGWLVTNDPNGIFQK 275
           K +   GWR G +  ++ N +F K
Sbjct: 311 KYFGATGWRLGVIALHEDN-VFDK 333

Length = 527

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 105 LSADDVYVTLGCKQAVEVILSVLARPGA-NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163
           +  + V V+ G  + +E+++     PG   +L   P +  Y   A+   VE+R    L  
Sbjct: 72  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD- 130

Query: 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222
            NW++DL A+    D     + + +P NP GN+     L+ + E+ R  + +VVADE Y
Sbjct: 131 -NWQLDLPAIADNLD-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAY 186

Length = 351

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 5/122 (4%)

Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-PYYEGIAQRKQVEVRHFDLL 161
            +   D          A E  L  L  PG  V++   G    Y   A+    +     + 
Sbjct: 13  LQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72

Query: 162 PERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220
                 +D+  +E L  K N A +VI       G       L+EI ++A++  ++++ D 
Sbjct: 73  DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGV---LVPLKEIRKIAKEYGILLLVDA 129

Query: 221 VY 222
             
Sbjct: 130 AS 131

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 48.7 bits (117), Expect = 3e-06
 Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 18/118 (15%)

Query: 119 AVEVILSVLARPGANVLLPRP--GWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174
           A+   L  L + G +VLLP    G  Y   E I Q+  VEV   D         D     
Sbjct: 90  AISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP------GDDEALEA 143

Query: 175 ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232
           A+ + NT  + +  P NP   V     +  IA +A+    +VV D      TF +   
Sbjct: 144 AIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDN-----TFATPVL 193

Length = 396

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 48.5 bits (116), Expect = 3e-06
 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 38/186 (20%)

Query: 88  PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR------PGW 141
            AR A+A    R        D+V +  G  +      ++LAR     L PR      P +
Sbjct: 62  RARAAVAARHGRT------PDEVLLLAGAAEG----FALLAR-----LRPRRAAVVHPSF 106

Query: 142 PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYH 200
              E   +   + V    L P   + +D  AV   AD     +V+I NP NP   +   H
Sbjct: 107 TEPEAALRAAGIPVHRVVLDPP--FRLDPAAVPDDAD-----LVVIGNPTNPTSVL---H 156

Query: 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGW 259
             +++  + R  R++VV DE +      ++P  P  L G  +P V+ L S++K W + G 
Sbjct: 157 PAEQLLALRRPGRILVV-DEAFAD----AVPGEPESLAGDDLPGVLVLRSLTKTWSLAGL 211

Query: 260 RFGWLV 265
           R G+ +
Sbjct: 212 RVGYAL 217

Length = 349

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score = 48.8 bits (117), Expect = 3e-06
 Identities = 57/199 (28%), Positives = 84/199 (42%), Gaps = 19/199 (9%)

Query: 38  KNDPRP-VVPLG---YGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92
           K DPRP  V LG   Y D     P  R   +AE  +++     K   Y    G+P    A
Sbjct: 21  KADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLE---QEKTKNYLPIEGLPEFLEA 77

Query: 93  IADYLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIA 148
           +   L       L+ D V    TLG   A+ V    LAR  P A V +  P WP ++ I 
Sbjct: 78  VQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIF 137

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA---MVIINP--GNPCGNVFTYHHLQ 203
           +   +EV  +         +D D +  LAD  TA    +V+++    NP G   T    Q
Sbjct: 138 EAAGLEVETYPYYDAETKGLDFDGM--LADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQ 195

Query: 204 EIAEMARKLRVMVVADEVY 222
           E+A++ ++  ++   D  Y
Sbjct: 196 ELADLIKERGLIPFFDIAY 214

Length = 396

>gnl|CDD|99738 cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 26/121 (21%)

Query: 119 AVEVILSVLARPGANVLLPRPGWPYYEG-------IAQRKQVEVRHFDLLPERNWEVDLD 171
           A+  +L  L + G +V+        Y G       +  +  +EV   D         D +
Sbjct: 67  AISTVLLALLKAGDHVVASDDL---YGGTYRLFERLLPKLGIEVTFVDPD-------DPE 116

Query: 172 AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231
           A+EA     T  + + +P NP   V     ++ IAE+A +   ++V D      TF + P
Sbjct: 117 ALEAAIKPETKLVYVESPTNPTLKV---VDIEAIAELAHEHGALLVVDN-----TFAT-P 167

Query: 232 Y 232
           Y
Sbjct: 168 Y 168

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life. Length = 369

>gnl|CDD|180947 PRK07366, PRK07366, succinyldiaminopimelate transaminase; Validated

 Score = 45.8 bits (109), Expect = 3e-05
 Identities = 66/304 (21%), Positives = 117/304 (38%), Gaps = 42/304 (13%)

Query: 124 LSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183
           L+VL  PG   LL  PG+P + G       ++    L  E ++      +          
Sbjct: 110 LAVL-NPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARL 168

Query: 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP 243
           MV+  P NP   +      QE     ++  +++V D  Y  L F      P     SI+ 
Sbjct: 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPP-----SILQ 223

Query: 244 V-------ITLGSISKRWLVPGWRFGWLVTNDP--NGIFQKSGIIDSIKDCLSIYSDIPT 294
                   I   ++SK + + G+R G+ + N      + Q   ++D      + Y  I  
Sbjct: 224 ADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVD-----FNQYRGI-- 276

Query: 295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----PCISCPNKPEGSMVTMV 350
            + GAI  +     +    + +   R+  +   + + +I    P       PE +M    
Sbjct: 277 -LNGAIAAL--TGPQATVQQTVQIFRQRRDAFINALHQIGWPVP------LPEATMYVWA 327

Query: 351 KL-NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGR 407
           KL  PW      + +EF  +L  +  V  +PG   G   + ++R A   +P  L++ + R
Sbjct: 328 KLPEPWQ----GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVER 383

Query: 408 MKAF 411
           + AF
Sbjct: 384 IAAF 387

Length = 388

>gnl|CDD|215829 pfam00266, Aminotran_5, Aminotransferase class-V

 Score = 43.8 bits (104), Expect = 9e-05
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)

Query: 89  ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR---PGANVLLPRPG----- 140
           AR  +A++++       S +++  T G  +A+ ++   L R   PG  +L+         
Sbjct: 48  AREKVAEFINAP-----SDEEIIFTSGTTEAINLVAISLGRSLKPGDEILVTEMEHHANL 102

Query: 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF-TY 199
            P+ E +A+R    VR   + P  N  +DLDA+E L    T   V I   +   NV  T 
Sbjct: 103 VPWQE-LAKRTGATVRVIPVDP--NGLLDLDALEKLLTPRTKL-VAITHVS---NVTGTV 155

Query: 200 HHLQEIAEMARKLRVMVVADEV--YGHL 225
           + ++EI ++A +   +VV D     GH 
Sbjct: 156 NPVEEIGKLAHEYGALVVVDAAQAVGHR 183

This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 370

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 16/186 (8%)

Query: 87  PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-VLLPRPGWPYYE 145
           PP  R+    L     Y  + + + +  G  +A+++++  L  PG + VL+  P +  Y 
Sbjct: 61  PPGLRSALAAL-----YGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA 115

Query: 146 GIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYHHLQ 203
             A+ +   +    L+     +  D+ A+ A A  + A +V + +P NP G+      L 
Sbjct: 116 VCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIA---LD 172

Query: 204 EIAEMARKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF 261
           +I    + L  + +VV DE YG   F  +P + +GL      +  L ++SK   +   R 
Sbjct: 173 QIERALQALQGKALVVVDEAYGE--FSDVP-SAVGLLARYDNLAVLRTLSKAHALAAARI 229

Query: 262 GWLVTN 267
           G L+ N
Sbjct: 230 GSLIAN 235

Length = 364

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 19/118 (16%)

Query: 166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVVADEVYG 223
           W+     +E L D +  A+ ++NP NP     +   +++I ++    R  +M++ D+VYG
Sbjct: 226 WQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG 285

Query: 224 ------HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275
                    F  +PY  +G++          S SK +   GWR G +  +  N IF K
Sbjct: 286 TFVDDFRSLFAELPYNTIGVY----------SFSKYFGATGWRLGTIALHKDN-IFDK 332

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|234769 PRK00451, PRK00451, glycine dehydrogenase subunit 1; Validated

 Score = 42.4 bits (101), Expect = 3e-04
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 9/67 (13%)

Query: 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF-TYHHLQEIAEMARK 211
           +EV             DL+A+EA  D +TAA+V+  P     N F     L+EIAE+A  
Sbjct: 180 IEVVEVPYEDGV---TDLEALEAAVDDDTAAVVVQYP-----NFFGVIEDLEEIAEIAHA 231

Query: 212 LRVMVVA 218
              + + 
Sbjct: 232 GGALFIV 238

Length = 447

>gnl|CDD|235053 PRK02610, PRK02610, histidinol-phosphate aminotransferase; Provisional

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 18/144 (12%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-----ARPGANVLLPRPGWPYY 144
           ++AIA+Y++             +++G   + E+I S+L        G+ +L+  P +  Y
Sbjct: 72  KQAIAEYVNESAAGSSQITPANISVG-NGSDELIRSLLIATCLGGEGS-ILVAEPTFSMY 129

Query: 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL--ADKNTAAMVI--INPGNPCGNVFTYH 200
             +AQ   + V      PE  +E+DL A ++     +N    V+  ++P +P GN  T  
Sbjct: 130 GILAQTLGIPVVRVGRDPE-TFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLT-- 186

Query: 201 HLQEIAEMARKL--RVMVVADEVY 222
                 E  R L   ++VV DE Y
Sbjct: 187 --AAELEWLRSLPEDILVVIDEAY 208

Length = 374

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 21/163 (12%)

Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP 162
            KL  + + +T G  +A+  ++ +LA     V++PR  +  YE +A+     +       
Sbjct: 50  SKLFGEPIVITAGITEALY-LIGILALRDRKVIIPRHTYGEYERVARFFAARI------- 101

Query: 163 ERNWEVDLDAVEALADKNTAAMVII--NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220
                 D + +E L ++N+   V+   NP NP G  + +  L+ + +       +++ DE
Sbjct: 102 -IKGPNDPEKLEELVERNS---VVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDE 157

Query: 221 VYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263
            +       I +           +I L + +K + +PG R G+
Sbjct: 158 AF-------IDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGY 193

Length = 311

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 24/216 (11%)

Query: 68  IVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSV 126
           +++A+ + KF   Y       P  R +   L+ D    L ++++ V  G  + +++++  
Sbjct: 70  VLEALGNMKFPYVYPD-----PESRRLRAALAED--SGLESENILVGCGADELIDLLMRC 122

Query: 127 LARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186
           +  PG  ++   P +  Y   A     EV      P+ + +V    VEA+       + +
Sbjct: 123 VLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPR-IVEAVETHKPKLLFL 181

Query: 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT 246
            +P NP G++ +   L +I E    L ++VV DE Y  + F +   + M        +I 
Sbjct: 182 TSPNNPDGSIISDDDLLKILE----LPILVVLDEAY--IEFSTQE-SRMKWVKKYDNLIV 234

Query: 247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI 282
           L + SKR  + G R G+       G F    II+ +
Sbjct: 235 LRTFSKRAGLAGLRVGY-------GAF-PLSIIEYL 262

Length = 380

>gnl|CDD|216367 pfam01212, Beta_elim_lyase, Beta-eliminating lyase

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 122 VILSVLARPGANVLLPRPGWPY-YE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178
           + L    R G  V+   P   Y  E  G A+    +     L      ++DL+ +EA   
Sbjct: 62  LALMAHCRRGDEVICGEPAHIYFDETGGHAELGGAQPV--PLPGAEAGKLDLEDLEAAIR 119

Query: 179 -------KNTAAMVIINPGN-PCGNVFTYHHLQEIAEMARKLRVMVVAD 219
                    T  + + N  N   G V +   L+EI  +AR+  + +  D
Sbjct: 120 PVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAIAREHGIPLHLD 168

Length = 288

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 19/185 (10%)

Query: 87  PPAR-RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP-RPGWPYY 144
           PP    A + Y        ++ + +  + G  +A+E+++     PG + +    P +  Y
Sbjct: 62  PPELINAYSAY------AGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMY 115

Query: 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYHHLQ 203
              A+   V V+   L  +  +++ LD +E L     A +V I NP NP G V     ++
Sbjct: 116 AISAETFNVGVKALPLTAD--YQLPLDYIEQLDG---AKLVFICNPNNPTGTVIDRADIE 170

Query: 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263
           ++ EM      +VV DE Y  + F    Y+   L  S   ++ L ++SK + + G R G+
Sbjct: 171 QLIEMTPD--AIVVVDEAY--IEF-CPEYSVADLLASYPNLVVLRTLSKAFALAGARCGF 225

Query: 264 LVTND 268
            + N+
Sbjct: 226 TLANE 230

Length = 354

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 22/151 (14%)

Query: 133 NVLLPRPGWPYYEGIAQRKQVEVRH--FDLLP----ERNWEVDLDAVEALADKNTAAMVI 186
           N+++  P +  Y+G A              LP      N E+       L + N   + I
Sbjct: 81  NIIIVEPNFNEYKGYA-----FTHGIRISALPFNLINNNPEI-------LNNYNFDLIFI 128

Query: 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT 246
           ++P NP GN+ +   L  I+E+ RK   ++  DE +    F         L       + 
Sbjct: 129 VSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFID--FVPNRAEEDVLLNRSYGNVI 186

Query: 247 LG-SISKRWLVPGWRFGWLVTNDPN-GIFQK 275
           +G S++K   +P  R G++ T+D N  I +K
Sbjct: 187 IGRSLTKILGIPSLRIGYIATDDYNMKISRK 217

Length = 332

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	419
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02187	462	rooty/superroot1	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PLN02656	409	tyrosine transaminase	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PRK06855	433	aminotransferase; Validated	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PRK09148	405	aminotransferase; Validated	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK07324	373	transaminase; Validated	100.0
PLN02231	534	alanine transaminase	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK07777	387	aminotransferase; Validated	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PRK08175	395	aminotransferase; Validated	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PLN02368	407	alanine transaminase	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02397	423	aspartate transaminase	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	100.0
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	100.0
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	100.0
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	100.0
PLN02822	481	serine palmitoyltransferase	100.0
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	100.0
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	100.0
PRK10874	401	cysteine sulfinate desulfinase; Provisional	100.0
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	100.0
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	100.0
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	100.0
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	100.0
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	100.0
PRK02627	396	acetylornithine aminotransferase; Provisional	100.0
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	100.0
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	100.0
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	100.0
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.98
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.98
PRK13392	410	5-aminolevulinate synthase; Provisional	99.98
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.97
PRK10534	333	L-threonine aldolase; Provisional	99.97
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.97
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.97
PLN02483	489	serine palmitoyltransferase	99.97
PRK07179	407	hypothetical protein; Provisional	99.97
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.97
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.97
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.97
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.97
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.97
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.97
PLN02721	353	threonine aldolase	99.97
PRK09064	407	5-aminolevulinate synthase; Validated	99.97
PRK02948	381	cysteine desulfurase; Provisional	99.97
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.97
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.97
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.97
PLN02409	401	serine--glyoxylate aminotransaminase	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.97
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.97
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.96
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.96
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.96
PRK07049	427	methionine gamma-lyase; Validated	99.96
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.96
PRK13393	406	5-aminolevulinate synthase; Provisional	99.96
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.96
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.96
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.96
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.96
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.96
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.96
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.96
PRK06234	400	methionine gamma-lyase; Provisional	99.96
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.96
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.95
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.95
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.95
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.95
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.95
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.95
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.95
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.95
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.95
PLN02242	418	methionine gamma-lyase	99.95
PRK14012	404	cysteine desulfurase; Provisional	99.95
PRK06767	386	methionine gamma-lyase; Provisional	99.95
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.95
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.95
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.94
PRK08045	386	cystathionine gamma-synthase; Provisional	99.94
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.94
PRK08776	405	cystathionine gamma-synthase; Provisional	99.94
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.94
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.94
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.94
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.94
PRK08249	398	cystathionine gamma-synthase; Provisional	99.94
PRK08861	388	cystathionine gamma-synthase; Provisional	99.94
PRK04260	375	acetylornithine aminotransferase; Provisional	99.94
PRK06460	376	hypothetical protein; Provisional	99.94
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.94
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.94
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.94
PLN02651	364	cysteine desulfurase	99.94
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.94
PLN00144	382	acetylornithine transaminase	99.94
PRK07503	403	methionine gamma-lyase; Provisional	99.94
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.94
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.94
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.93
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.93
PRK07811	388	cystathionine gamma-synthase; Provisional	99.93
PRK07505	402	hypothetical protein; Provisional	99.93
PRK07582	366	cystathionine gamma-lyase; Validated	99.93
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.93
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.93
PRK09028	394	cystathionine beta-lyase; Provisional	99.93
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.93
PLN02955	476	8-amino-7-oxononanoate synthase	99.93
PRK08574	385	cystathionine gamma-synthase; Provisional	99.93
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.93
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.93
PRK07050	394	cystathionine beta-lyase; Provisional	99.92
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.92
PRK05968	389	hypothetical protein; Provisional	99.92
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.92
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.92
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.92
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.92
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.92
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.92
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.92
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.92
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.92
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.91
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.91
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.91
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.91
PLN02624	474	ornithine-delta-aminotransferase	99.91
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.91
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.91
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.91
PRK05939	397	hypothetical protein; Provisional	99.91
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.91
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.91
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.91
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.9
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.9
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.9
PRK08064	390	cystathionine beta-lyase; Provisional	99.9
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.9
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.9
PRK07671	377	cystathionine beta-lyase; Provisional	99.9
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.9
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.9
PLN02509	464	cystathionine beta-lyase	99.89
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.89
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.89
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.89
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.89
PRK05967	395	cystathionine beta-lyase; Provisional	99.89
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.89
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.89
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.88
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.88
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.88
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.88
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.87
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.87
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.87
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.87
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.87
PRK06541	460	hypothetical protein; Provisional	99.86
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.86
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.86
PRK08114	395	cystathionine beta-lyase; Provisional	99.86
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.86
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.86
PRK03080	378	phosphoserine aminotransferase; Provisional	99.86
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.85
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.85
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.85
PRK02769	380	histidine decarboxylase; Provisional	99.85
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.85
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.84
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.84
PLN02724	805	Molybdenum cofactor sulfurase	99.84
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.84
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.84
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.84
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.83
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.83
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.83
PRK07482	461	hypothetical protein; Provisional	99.83
PRK07678	451	aminotransferase; Validated	99.83
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.83
PLN02880	490	tyrosine decarboxylase	99.83
PRK07046	453	aminotransferase; Validated	99.83
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.83
PRK05965	459	hypothetical protein; Provisional	99.82
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.82
PLN02590	539	probable tyrosine decarboxylase	99.82
PRK06434	384	cystathionine gamma-lyase; Validated	99.82
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.82
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.82
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.82
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.82
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.82
PLN02271	586	serine hydroxymethyltransferase	99.82
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.82
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.82
PRK06105	460	aminotransferase; Provisional	99.82
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.82
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.82
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.81
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.81
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.81
PRK06062	451	hypothetical protein; Provisional	99.81
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.8
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.8
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.8
PRK06148	1013	hypothetical protein; Provisional	99.79
PRK07483	443	hypothetical protein; Provisional	99.79
PRK06149	972	hypothetical protein; Provisional	99.79
PLN03032	374	serine decarboxylase; Provisional	99.79
PRK12403	460	putative aminotransferase; Provisional	99.79
PRK07480	456	putative aminotransferase; Validated	99.79
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.79
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.79
PRK07036	466	hypothetical protein; Provisional	99.79
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.79
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.79
PRK07481	449	hypothetical protein; Provisional	99.79
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.78
PRK06917	447	hypothetical protein; Provisional	99.78
PRK13237	460	tyrosine phenol-lyase; Provisional	99.78
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.78
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.78
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.77
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.77
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.77
PRK04311	464	selenocysteine synthase; Provisional	99.77
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.77
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.77
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.76
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.76
PRK08297	443	L-lysine aminotransferase; Provisional	99.75
PLN02452	365	phosphoserine transaminase	99.75
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.75
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.75
PLN02263	470	serine decarboxylase	99.73
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.73
PRK05367	954	glycine dehydrogenase; Provisional	99.72
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.72
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.71
PRK15029	755	arginine decarboxylase; Provisional	99.71
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.71
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.71
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.7
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.7
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.69
PRK12566	954	glycine dehydrogenase; Provisional	99.69
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.68
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.68
PRK12462	364	phosphoserine aminotransferase; Provisional	99.68
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.68
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.67
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.63
PRK13578	720	ornithine decarboxylase; Provisional	99.61
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.6
PRK15400	714	lysine decarboxylase CadA; Provisional	99.59
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.58
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.57
PRK05367	954	glycine dehydrogenase; Provisional	99.57
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.54
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.54
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.54
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.51
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.5
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	99.42
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.41
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.4
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.37
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	99.34
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.34
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.32
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.24
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.15
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.05
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.04
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	99.01
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	98.98
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.96
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.86
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	98.8
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.76
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.75
COG4100	416	Cystathionine beta-lyase family protein involved i	98.65
PRK12566	954	glycine dehydrogenase; Provisional	98.62
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.55
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	98.04
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	97.87
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	97.77
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	97.75
PLN02672	1082	methionine S-methyltransferase	96.95
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	96.42
PRK10595	164	SOS cell division inhibitor; Provisional	90.47
TIGR00623	168	sula cell division inhibitor SulA. All proteins in	88.78
COG2102	223	Predicted ATPases of PP-loop superfamily [General	83.42

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.9e-68  Score=459.67  Aligned_cols=409  Identities=56%  Similarity=1.030  Sum_probs=392.8

Q ss_pred             ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHH
Q 014769            9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP   88 (419)
Q Consensus         9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~   88 (419)
                      |++.-+...+.+...+|+.++..+...+...+..++|.++.|+|+.++++++.+...+|+.++++.+..++|+|+.|...
T Consensus        28 W~f~gs~~a~ka~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~  107 (447)
T KOG0259|consen   28 WRFKGSDAAKKAASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILP  107 (447)
T ss_pred             eeeccchhhhhhccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHH
Confidence            99999998889999999999999998887666779999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc
Q 014769           89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV  168 (419)
Q Consensus        89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  168 (419)
                      .|+++|+|+++.....+++++|++|+|.++|++.++.+|.+||..|++|.|+|+.|...+...|++++++.+.|+.+|.+
T Consensus       108 AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weI  187 (447)
T KOG0259|consen  108 ARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEI  187 (447)
T ss_pred             HHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCccccee
Confidence            99999999999888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEe
Q 014769          169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG  248 (419)
Q Consensus       169 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  248 (419)
                      |++.++..++++|.++++.||+||+|.+++.+.|++|++.|+++++++|.||+|.++.|++.++.++..+....++++++
T Consensus       188 DL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlg  267 (447)
T KOG0259|consen  188 DLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLG  267 (447)
T ss_pred             chHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999888999999


Q ss_pred             cCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       249 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      |+||.|..||||+||++..++..++.+...++.+++..+...++++..|.|+..+|++..++++.....-++.+.+...+
T Consensus       268 gisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~  347 (447)
T KOG0259|consen  268 GISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYS  347 (447)
T ss_pred             ccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHH
Confidence            99999999999999999999999998888889999998888899999999999999987789999999999999999999


Q ss_pred             HhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHH
Q 014769          329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       329 ~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                      .|+++|++.|...|++.+|+|++++-..+....++.+|+.+|.+|+.+.+.||..|+.++|+|++++.+.+.+++++.||
T Consensus       348 ~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Ri  427 (447)
T KOG0259|consen  348 RLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRI  427 (447)
T ss_pred             HHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHH
Confidence            99999999998899999999999988766677899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhc
Q 014769          409 KAFCQRHTK  417 (419)
Q Consensus       409 ~~~~~~~~~  417 (419)
                      +.++.++.+
T Consensus       428 k~Fc~RH~~  436 (447)
T KOG0259|consen  428 KEFCDRHSK  436 (447)
T ss_pred             HHHHHhhhh
Confidence            999998863

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=6.6e-63  Score=471.69  Aligned_cols=413  Identities=61%  Similarity=1.112  Sum_probs=359.1

Q ss_pred             cccccccCchh-hhhCCchhHHHHHHHHHHhhhcCC-CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC
Q 014769            6 ENKWGFEDKQE-HKAAPAVTVKTSLASIIDSVNKND-PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN   83 (419)
Q Consensus         6 ~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~   83 (419)
                      ...|.+..+.. +++.....++.++.++.+.+.+.. +.++|+|++|+|+.+|++++++.+.+++.+++..+..+.|+++
T Consensus        14 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~   93 (430)
T PLN00145         14 TARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTC   93 (430)
T ss_pred             cccccccCchhhHHHhcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCC
Confidence            46899998883 667777889999888888776554 7899999999999888899999999999999887666689999


Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE  163 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~  163 (419)
                      .|.+++|+++++++.+.++..+++++|++|+|++++++.++.++.++||+|++++|+|+.|...+...|.+++.+++.++
T Consensus        94 ~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~  173 (430)
T PLN00145         94 VGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPE  173 (430)
T ss_pred             ccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcc
Confidence            99999999999999988898999999999999999999999999999999999999999999999999999999998777


Q ss_pred             CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769          164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP  243 (419)
Q Consensus       164 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  243 (419)
                      .+|.+|++.++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.|++..+.++..++...+
T Consensus       174 ~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~  253 (430)
T PLN00145        174 RGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAP  253 (430)
T ss_pred             cCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCc
Confidence            78999999999999888999999999999999999999999999999999999999999999987765566656666668


Q ss_pred             EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769          244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA  323 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  323 (419)
                      +++++||||.|++||+|+||++++.+..+....++++.++........++.+.|.++..+|+....+++++.++++++++
T Consensus       254 vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~  333 (430)
T PLN00145        254 VLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETA  333 (430)
T ss_pred             EEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998654433322223445555554445678899999999998644688999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHH
Q 014769          324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKD  403 (419)
Q Consensus       324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~  403 (419)
                      +.+.+.|++++++.++..|++|+|+|++++.....+..++.+++.++++++||.+.||..|+..+|+||+++.+++++++
T Consensus       334 ~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~  413 (430)
T PLN00145        334 DICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLED  413 (430)
T ss_pred             HHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHH
Confidence            99999999988887555799999999998743222223577899899999999999999999899999999988999999


Q ss_pred             HHHHHHHHHHHHhcc
Q 014769          404 GLGRMKAFCQRHTKK  418 (419)
Q Consensus       404 ~l~~l~~~~~~~~~~  418 (419)
                      ++++|++++.++.+.
T Consensus       414 al~rl~~~~~~~~~~  428 (430)
T PLN00145        414 GLERLKSFCLRHAKL  428 (430)
T ss_pred             HHHHHHHHHHHhccc
Confidence            999999999998875

>PLN02187 rooty/superroot1

Probab=100.00  E-value=4.4e-62  Score=468.76  Aligned_cols=415  Identities=48%  Similarity=0.939  Sum_probs=356.0

Q ss_pred             CCCCCcccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC
Q 014769            1 MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY   80 (419)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y   80 (419)
                      ++||..+.|.+.-+.........+|+.+...+++.+.++.+.++|+|++|+|..+|.+.+++.+.+++.+.++.+....|
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y  104 (462)
T PLN02187         25 TRNGQSSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSY  104 (462)
T ss_pred             cccccccccccCcchhhhhhhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCC
Confidence            36787888999888777666668999999999888877789999999999999888788889999999998877666689


Q ss_pred             CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEec
Q 014769           81 ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL  160 (419)
Q Consensus        81 ~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~  160 (419)
                      +++.|..++|++||+|+.+.++.++++++|++|+|+++++..++.++++|||+|++++|+|+.|...+...|.+++.+++
T Consensus       105 ~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l  184 (462)
T PLN02187        105 GPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDL  184 (462)
T ss_pred             CCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeC
Confidence            99999999999999999988888999999999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      .++++|.+|++.++++++++++++++++|+||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+..
T Consensus       185 ~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~  264 (462)
T PLN02187        185 LPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS  264 (462)
T ss_pred             ccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc
Confidence            76678999999999998888999999999999999999999999999999999999999999999987655555555555


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                      ..++++++||||.|++||+|+||+++++++.+.   ++++.+....   +...+++.+.|.++.++|++...+++++.++
T Consensus       265 ~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~  341 (462)
T PLN02187        265 IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNK  341 (462)
T ss_pred             CCcEEEEecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHH
Confidence            457999999999999999999999986543221   1233444333   2333568899999999997644688999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE  397 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~  397 (419)
                      .++++++.+.+.|+++++..++..|++|+|+|++++.....+..++.+++.+++.++||.+.||..|+..+|+||+++.+
T Consensus       342 ~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~  421 (462)
T PLN02187        342 ILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVE  421 (462)
T ss_pred             HHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCC
Confidence            99999999999999886554344789999999988642111222466888888899999999999998889999999989


Q ss_pred             HHHHHHHHHHHHHHHHHHhcc
Q 014769          398 PSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      ++.+++++++|.++++++.++
T Consensus       422 ~e~l~~al~rL~~~l~~~~~~  442 (462)
T PLN02187        422 AHMLEDALERLKGFCTRHAKK  442 (462)
T ss_pred             HHHHHHHHHHHHHHHHHhhhc
Confidence            999999999999999988765

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-61  Score=453.81  Aligned_cols=378  Identities=27%  Similarity=0.448  Sum_probs=328.9

Q ss_pred             CCchhHHHHHHHHHHhhhcCCC-CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Q 014769           20 APAVTVKTSLASIIDSVNKNDP-RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLS   98 (419)
Q Consensus        20 ~~~~~i~~~~~~~~~~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~   98 (419)
                      ..+..+..++....+.. +..+ .++|+|++|+|    .++.|+.+++++.+++..+.. .|.++.|.++||++|++++.
T Consensus         6 ~~~~~~~~~~~~~~~~~-~~~~~~~vi~l~iG~P----d~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~   79 (393)
T COG0436           6 VLPSYTFAVLAEAKAAA-ELKGKEDVIDLSIGEP----DFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYK   79 (393)
T ss_pred             cCcchhHHHHhHHHHHH-HhcCCCCEEEeCCCCC----CCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHH
Confidence            34444555555222222 2223 68999999996    478899999999999887644 67799999999999999999


Q ss_pred             hhCCCCCCCCc-EEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHh
Q 014769           99 RDLPYKLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEAL  176 (419)
Q Consensus        99 ~~~~~~~~~~~-i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~  176 (419)
                      +++|+.+++++ |++|+|+++|+..++.++++|||+|++++|.|+.|.......|..++.++++.+ ++|.+|++.++++
T Consensus        80 ~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~  159 (393)
T COG0436          80 RRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAA  159 (393)
T ss_pred             HHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhh
Confidence            99999999877 999999999999999999999999999999999999999999999999998665 4899999999999


Q ss_pred             hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCC
Q 014769          177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWL  255 (419)
Q Consensus       177 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~  255 (419)
                      ++++++++++++||||||.+++.+++++|+++|++|+++||.||+|..+.|++..++++..+.. .+++|+++||||.|+
T Consensus       160 i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~  239 (393)
T COG0436         160 ITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYG  239 (393)
T ss_pred             cCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccc
Confidence            9999999999999999999999999999999999999999999999999999865555555544 468999999999999


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      ++|||+||++++++       ++++.+.... ....+++.+.|.++..+|+... ...++.+++.++++++.+.+.|.++
T Consensus       240 mtGwRvG~~v~~~~-------~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~  312 (393)
T COG0436         240 MTGWRIGWVVGPPE-------ELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI  312 (393)
T ss_pred             ccccceeEeecChH-------HHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999741       5777777554 4456889999999999999754 2678888899999999999999998


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC---CeEEEEeecCHHHHHHHHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                      +|+.++..|+|++|+|++++..     .++.+|+.+|++++||.|.||+.|+..   +++|++++.+++.+++++++|.+
T Consensus       313 ~g~~~~~~p~Ga~Y~~~~i~~~-----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~  387 (393)
T COG0436         313 GGLSVVKPPEGAFYLFPKIPEL-----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLAR  387 (393)
T ss_pred             CCeeeccCCCeeEEEEeecCCC-----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHH
Confidence            7898664499999999999863     378999999999999999999999975   89999999888999999999999


Q ss_pred             HHHHH
Q 014769          411 FCQRH  415 (419)
Q Consensus       411 ~~~~~  415 (419)
                      +++.+
T Consensus       388 ~~~~~  392 (393)
T COG0436         388 FLAEY  392 (393)
T ss_pred             HHHhc
Confidence            98865

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=2.1e-59  Score=446.60  Aligned_cols=394  Identities=62%  Similarity=1.112  Sum_probs=335.9

Q ss_pred             HHHHHHHHHHhh-hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 014769           25 VKTSLASIIDSV-NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY  103 (419)
Q Consensus        25 i~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~  103 (419)
                      |+.++.+++..+ .+..+.++|+|++|+|...+.+++++.+++++.+++.......|+++.|.+++|+++++++.+.+|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~   92 (409)
T PLN02656         13 IKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY   92 (409)
T ss_pred             hhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence            788888877766 3446889999999999866668889999999999887766678999999999999999999998888


Q ss_pred             CCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       104 ~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      .+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|+++..+++++++++.+|++.++.++++++++
T Consensus        93 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~  172 (409)
T PLN02656         93 KLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA  172 (409)
T ss_pred             CCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence            89999999999999999999999999999999999999999888888999999999876667889999999998888999


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      +++++|+||||.+++.+++++|+++|+++++++|+||+|.++.|++....++..++...++|+++||||.|++||+|+||
T Consensus       173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~  252 (409)
T PLN02656        173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGW  252 (409)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEE
Confidence            99999999999999999999999999999999999999999998775545555555556899999999999999999999


Q ss_pred             EEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE  343 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  343 (419)
                      +++++++.+...+++++.+........+++.+.|.++..++++....++++.+++++++++.+.+.|++++++..+..|+
T Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~  332 (409)
T PLN02656        253 FVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPE  332 (409)
T ss_pred             EEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCC
Confidence            99975433322235777777665444467889999999999864467899999999999999999999876554344799


Q ss_pred             ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      +|+|+|++++.....+..++.+++.++++++||.+.||+.|+..+|+||+++.+++++++++++|++++.++.++
T Consensus       333 gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~~  407 (409)
T PLN02656        333 GSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKT  407 (409)
T ss_pred             eEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence            999999998742211112356777788889999999999998889999999989999999999999999877643

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=9.6e-59  Score=441.75  Aligned_cols=394  Identities=64%  Similarity=1.118  Sum_probs=332.0

Q ss_pred             HHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 014769           25 VKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK  104 (419)
Q Consensus        25 i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~  104 (419)
                      |+..+.++.+.+.++.++++|+|+.|+|..+..+++++.+++++.+++.......|+++.|.+++|++|++|+.+.+|.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~   94 (409)
T PLN00143         15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ   94 (409)
T ss_pred             HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence            77777777777777889999999999987555588899999999998877666689998999999999999999988888


Q ss_pred             CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      +++++|++|+|+++++..++.+++++||.|++++|+|+.+...+...|.++..++++++++|.+|++.++++++++++.+
T Consensus        95 ~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~  174 (409)
T PLN00143         95 LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM  174 (409)
T ss_pred             CCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEE
Confidence            99999999999999999999999999999999999999999999999999999988666678899999999888788999


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      ++++||||||.+++.+++++|+++|+++++++|+||+|..+.+++....++..+....++++++||||.|++||+|+||+
T Consensus       175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~  254 (409)
T PLN00143        175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWL  254 (409)
T ss_pred             EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEE
Confidence            99999999999999999999999999999999999999999987654445555555568999999999999999999999


Q ss_pred             EeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          265 VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      +++++..+.+..+.++.+.........++.+.|.++..+|++....++++.+++++++++.+.+.|+++++..+...|++
T Consensus       255 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~g  334 (409)
T PLN00143        255 VTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEG  334 (409)
T ss_pred             EeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCe
Confidence            98654322211123344444333233357789999999997644678999999999999999999988755443447889


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      |+|+|++++.....+..++.+++.+++.++||.+.||..|+..+|+||+++.+++++++++++|+++++++++.
T Consensus       335 g~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~  408 (409)
T PLN00143        335 AFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK  408 (409)
T ss_pred             eEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence            99999999742111122467888888889999999999998889999999988999999999999999988764

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=4.8e-55  Score=417.37  Aligned_cols=376  Identities=33%  Similarity=0.629  Sum_probs=318.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhC------CCCCCCCcEEE
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL------PYKLSADDVYV  112 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~------~~~~~~~~i~~  112 (419)
                      ..++++|+|+.|+|...+.+.+++.+.+++.+.+.......|+++.|.++||++|++|+.+.+      |..+++++|++
T Consensus        30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~i  109 (412)
T PTZ00433         30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVL  109 (412)
T ss_pred             CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEE
Confidence            358899999999997655566789999999888776555689999999999999999998754      45688999999


Q ss_pred             cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769          113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP  192 (419)
Q Consensus       113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np  192 (419)
                      |+|+++++..++.+++++||+|+++.|+|..+...++..|.++..+++++++++++|+++++++++++++++++++||||
T Consensus       110 t~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NP  189 (412)
T PTZ00433        110 CSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNP  189 (412)
T ss_pred             eCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCC
Confidence            99999999999999999999999999999999999999999999999876667899999999988888899999999999


Q ss_pred             cccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc
Q 014769          193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI  272 (419)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  272 (419)
                      ||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++++++||||.|++||+|+||++++++...
T Consensus       190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~  269 (412)
T PTZ00433        190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN  269 (412)
T ss_pred             CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence            99999999999999999999999999999999988765444555555444689999999999999999999997433211


Q ss_pred             cchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeec
Q 014769          273 FQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL  352 (419)
Q Consensus       273 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~  352 (419)
                      .  +++++.++......++++.+.|.++..++.+....++++.++.++++++.+.+.|+++.++. +..|++|+|+|+++
T Consensus       270 ~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~f~~~~l  346 (412)
T PTZ00433        270 G--GDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPRGSMFLMSRL  346 (412)
T ss_pred             H--HHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCeeEEEEEEe
Confidence            1  14666666654434578899999999998764468899999999999999999998865676 55899999999998


Q ss_pred             CcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769          353 NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       353 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +.....+..++.+++..+++++||.+.||+.|+..+++||+++.+++++++++++|.++++++++
T Consensus       347 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~~  411 (412)
T PTZ00433        347 DLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHKK  411 (412)
T ss_pred             chhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence            74211111246788888887889999999999888999999998899999999999999988764

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=4e-55  Score=428.14  Aligned_cols=399  Identities=22%  Similarity=0.416  Sum_probs=323.5

Q ss_pred             cccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCH
Q 014769            8 KWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP   87 (419)
Q Consensus         8 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~   87 (419)
                      +|....++++..-..+.+..+.. ..+.+ +..|.++|+|+.|+|..+ .+++++.+.+++.+.+..  ...|+++.|..
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~  188 (517)
T PRK13355        114 RRTFKKSHKLDNVLYDVRGPVVD-EANRM-EAAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLF  188 (517)
T ss_pred             ccCCChhHHhhccCccHHHHHHH-HHHHH-HHcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChH
Confidence            36666666666666655544443 44444 335889999999998754 366788899998887753  34799999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE  167 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  167 (419)
                      +||++|++|+.++.+.++++++|++|+|+++++..++.+++++||+|++++|+|+.|...+...|.+++.++++++++|.
T Consensus       189 ~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~  268 (517)
T PRK13355        189 SARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY  268 (517)
T ss_pred             HHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence            99999999998876667899999999999999999999999999999999999999999999999999999988777899


Q ss_pred             cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769          168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL  247 (419)
Q Consensus       168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  247 (419)
                      +|+++++.+++++++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.|++....++..+..+..++++
T Consensus       269 ~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~  348 (517)
T PRK13355        269 PDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTF  348 (517)
T ss_pred             CCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEE
Confidence            99999999998889999999999999999999999999999999999999999999999887555565555444457888


Q ss_pred             ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEI  325 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~  325 (419)
                      +||||.|+++|+|+||++++.+..+.  .++++.+........+.+.++|.++..+|....  .+++.+. .++.++++.
T Consensus       349 ~S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~  425 (517)
T PRK13355        349 SGLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQREL  425 (517)
T ss_pred             ecchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHH
Confidence            99999999999999999976432211  023444443333345678899999999996422  3455554 345566899


Q ss_pred             HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeecCHHHHHH
Q 014769          326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKD  403 (419)
Q Consensus       326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~~~~~l~~  403 (419)
                      +.+.|+++|++. +..|++++|+|++++.... +..++.+++.++++++||.+.||+.|+  .++||||+++.++++|++
T Consensus       426 l~~~L~~~~g~~-~~~p~g~fy~~~~l~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~  503 (517)
T PRK13355        426 VYNALNAIPGIS-AVKPKAAFYIFPKIDVKKF-NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLED  503 (517)
T ss_pred             HHHHHhcCCCcc-cCCCCeeeEEEeecCcccC-CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHH
Confidence            999999888888 5589999999998874211 122567888888899999999999997  368999999989999999


Q ss_pred             HHHHHHHHHHHHh
Q 014769          404 GLGRMKAFCQRHT  416 (419)
Q Consensus       404 ~l~~l~~~~~~~~  416 (419)
                      ++++|++++.+++
T Consensus       504 a~~rl~~~~~~~~  516 (517)
T PRK13355        504 AMDRLADFFSYYR  516 (517)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998763

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=9.9e-55  Score=414.31  Aligned_cols=395  Identities=50%  Similarity=0.920  Sum_probs=331.4

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY   96 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   96 (419)
                      .+...-..|+.+...+.+.  ...+.++|+|+.|+|..+|.+++++.+.+++.+.+.......|++..|..++|++++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~   85 (403)
T TIGR01265         8 HAKKTVNPIRAIVDNLKVK--PNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEY   85 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHH--HhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence            3344556677777655442  23478999999999987778889999999999988765556898889999999999999


Q ss_pred             HHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769           97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL  176 (419)
Q Consensus        97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  176 (419)
                      +....+..+++++|++|+|+++++..++.+++.+||+|++++|+|..+...++..|.+++.+++++++++.+|++.++++
T Consensus        86 l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~  165 (403)
T TIGR01265        86 LSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEAL  165 (403)
T ss_pred             HHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHH
Confidence            98877888889999999999999999999999999999999999999999999999999998886666788999999998


Q ss_pred             hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC
Q 014769          177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV  256 (419)
Q Consensus       177 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  256 (419)
                      +.++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+....++|+++||||.|++
T Consensus       166 ~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~  245 (403)
T TIGR01265       166 ADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVV  245 (403)
T ss_pred             hCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCC
Confidence            88889999999999999999999999999999999999999999999998877555566666655679999999999999


Q ss_pred             CCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769          257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCI  336 (419)
Q Consensus       257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  336 (419)
                      ||+|+||++++++..++. .++++.+........+++.+.|.++..++++....++++.+++++++++.+.+.|+.++++
T Consensus       246 pGlRiG~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  324 (403)
T TIGR01265       246 PGWRLGWIIIHDPHGIFR-DTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGL  324 (403)
T ss_pred             CcceEEEEEEeCchhhhH-HHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            999999999865422221 1244445444433456788999999999976456789999999999999999999988777


Q ss_pred             CCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          337 SCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       337 ~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      . +..|.+|+|+|++++.....+..++.+++..+++++||.+.||..|+.++++||+++.+++++++++++|.+++.++
T Consensus       325 ~-~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~  402 (403)
T TIGR01265       325 V-CPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCERH  402 (403)
T ss_pred             e-ecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            6 55799999999999753211112567888888888999999999998889999999988899999999999999775

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=2.6e-54  Score=411.68  Aligned_cols=392  Identities=35%  Similarity=0.707  Sum_probs=322.4

Q ss_pred             hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769           18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL   97 (419)
Q Consensus        18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l   97 (419)
                      +......++.++..... . .+.+.++|+|+.|.|...+.+++++.+.+++.+.+.......|++..|..++|+++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~-~-~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~   86 (401)
T TIGR01264         9 SKNTVNPIRAIVDNMKV-K-PNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYY   86 (401)
T ss_pred             HhhhhhHHHHHHHHHHh-h-hhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHH
Confidence            34444556666653332 1 234678999999998643456788999999998877655567998899999999999999


Q ss_pred             HhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh
Q 014769           98 SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA  177 (419)
Q Consensus        98 ~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~  177 (419)
                      .+ .+..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.++..++++.++++++|++.++..+
T Consensus        87 ~~-~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~  165 (401)
T TIGR01264        87 HN-PDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLI  165 (401)
T ss_pred             hh-cCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHh
Confidence            87 45568899999999999999999999999999999999999999999999999999998876667889999999988


Q ss_pred             cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC
Q 014769          178 DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP  257 (419)
Q Consensus       178 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  257 (419)
                      +++++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++....++..+....++|+++||||.|+++
T Consensus       166 ~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~  245 (401)
T TIGR01264       166 DEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVP  245 (401)
T ss_pred             ccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCc
Confidence            87889999999999999999999999999999999999999999999988765555555555544689999999999999


Q ss_pred             CceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       258 G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      |+|+||++++++....  .++++.++.......+++.+.|.++..+|.+...+++++.++.++++++.+.+.|++++++.
T Consensus       246 GlRiG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~  323 (401)
T TIGR01264       246 GWRLGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLR  323 (401)
T ss_pred             cceEEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence            9999999987532111  12445555443334567889999999999764468899999999999999999999887766


Q ss_pred             CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                       +..|++|+|+|++++.....+..++.+++.++++++||.+.||+.|+.++++|++++.+++++++++++|.++++++
T Consensus       324 -~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~~  400 (401)
T TIGR01264       324 -PVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCERH  400 (401)
T ss_pred             -ccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence             45899999999998642111122467888888888999999999998889999999988999999999999998764

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=1.2e-53  Score=409.10  Aligned_cols=375  Identities=23%  Similarity=0.335  Sum_probs=306.0

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      ..+.++++|++|+|... .+++++.+.+++.+.+.......|++..|.++||+++++|+++.+|..+++++|++|+|+++
T Consensus        29 ~~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~  107 (433)
T PRK06855         29 KLGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGD  107 (433)
T ss_pred             hccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHH
Confidence            34778999999998543 46788999999988876555568999999999999999999998899999999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHH-HhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeCCCCcccc
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGI-AQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIINPGNPCGN  195 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~  195 (419)
                      ++..++. ++.+||.|++++|+|+.+... ....|..++.++++++++|.+|+++|+++++  ++++++++++|+||||.
T Consensus       108 al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~  186 (433)
T PRK06855        108 AIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGA  186 (433)
T ss_pred             HHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCc
Confidence            9999985 788999999999999987654 2455888888888766778899999999886  35688999999999999


Q ss_pred             CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      ++|.+++++|+++|+++|++||+||+|..+.|++..++++..+..+.++|+++||||.|++||+|+||++++++...-.-
T Consensus       187 ~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~  266 (433)
T PRK06855        187 VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVF  266 (433)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHH
Confidence            99999999999999999999999999999998775555655554444689999999999899999999998532100000


Q ss_pred             hhHHHHHHhhhccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          276 SGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       276 ~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                      ..+++.+........+++.+.|.++.+++.+.. .+++++.+..++++++.+.+.|++++++. +..|++|+|+|++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~w~~l~~  345 (433)
T PRK06855        267 KKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK-VNRTNGAFYMTVVFED  345 (433)
T ss_pred             HHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-ccCCCeeEEEeecccc
Confidence            023343433322334578899999999998754 57899999999999999999998877776 5589999999999985


Q ss_pred             ccc--------c-------------C-CCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEee-cCHHHHHHHHHHHHH
Q 014769          355 WLL--------E-------------D-INDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFC-AEPSALKDGLGRMKA  410 (419)
Q Consensus       355 ~~~--------~-------------~-~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~-~~~~~l~~~l~~l~~  410 (419)
                      ...        .             + ..++.+++..+++++||.+.||+.|+. ..++||+++ .++++|++++++|.+
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~  425 (433)
T PRK06855        346 GVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAE  425 (433)
T ss_pred             ccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHH
Confidence            310        0             0 013667888888999999999999975 357999997 589999999999999


Q ss_pred             HHHHHh
Q 014769          411 FCQRHT  416 (419)
Q Consensus       411 ~~~~~~  416 (419)
                      +++++.
T Consensus       426 ~~~~~~  431 (433)
T PRK06855        426 KIEEYL  431 (433)
T ss_pred             HHHHHh
Confidence            998754

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=1.5e-53  Score=405.92  Aligned_cols=353  Identities=28%  Similarity=0.464  Sum_probs=305.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a  119 (419)
                      +.++|+|+.|.|.    +++++.+++++.+.+.+. ...|+++.|.++||+++++++++.+|..++++ +|++|+|++++
T Consensus        53 ~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~a  127 (413)
T PLN00175         53 KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEA  127 (413)
T ss_pred             cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHH
Confidence            4589999999975    456788899998888763 45899999999999999999999889888997 79999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++.+++++||+|++++|+|..+...++..|.+++.++++++ ++.+|++.+++.+.++++++++++|+||||.++|.
T Consensus       128 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~  206 (413)
T PLN00175        128 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTR  206 (413)
T ss_pred             HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCH
Confidence            99999999999999999999999999999999999999998654 37899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++++|+++|+++++++|+||+|..+.|++. ..++..+.. .+++|+++||||.|+++|+|+||+++++        ++
T Consensus       207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~--------~l  277 (413)
T PLN00175        207 EELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--------HL  277 (413)
T ss_pred             HHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH--------HH
Confidence            9999999999999999999999999988653 334444432 4679999999999999999999999875        57


Q ss_pred             HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      ++.+..... ...+++.+.|.++..+|+.. ..++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++..  
T Consensus       278 ~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~~f~~~~~~~~--  352 (413)
T PLN00175        278 TWGVRQAHSFLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEV-GFK-VYPSSGTYFVMVDHTPF--  352 (413)
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEecccc--
Confidence            787776653 35778899999999999763 5788999999999999999999987 777 55899999999987431  


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCC-----CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGL-----KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                       +..++.+++.++++++||.+.||+.|+.     .+++||+++.+++++++++++|++++++
T Consensus       353 -~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~~  413 (413)
T PLN00175        353 -GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLKR  413 (413)
T ss_pred             -CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHhC
Confidence             1124678999998889999999998852     4699999988999999999999988763

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-53  Score=404.49  Aligned_cols=359  Identities=20%  Similarity=0.284  Sum_probs=306.4

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~a  119 (419)
                      +.+.|+|+.|+|..   .++++.+.+++.+.+.......|+++.|.++||++|++++.+.+|..+++ ++|++|+|++++
T Consensus        38 ~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a  114 (405)
T PRK06207         38 PGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA  114 (405)
T ss_pred             CCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence            56789999999762   34567888888888766545689999999999999999999988988888 899999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc---CCCCcccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL---PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV  196 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  196 (419)
                      +..++.+++++||+|++++|+|+.+...++..|.+++.++++   ++.++++|++.++++++++++++++++|+||||.+
T Consensus       115 l~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~  194 (405)
T PRK06207        115 LFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVV  194 (405)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcC
Confidence            999999999999999999999999999999999999988875   33468899999999988888999999999999999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      ++.+++++|+++|+++|++||+||+|..+.|++..+.++..+. ..+++++++||||.|++||+|+||++++.       
T Consensus       195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~-------  267 (405)
T PRK06207        195 YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP-------  267 (405)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH-------
Confidence            9999999999999999999999999999998775544444332 24689999999999999999999999865       


Q ss_pred             hhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          276 SGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       276 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                       ++++.+..... ...+.+.+.|.++..++++. ..++++..++++++++.+.+.|++++++. +..|++|+|+|++++.
T Consensus       268 -~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~fl~~~l~~  344 (405)
T PRK06207        268 -AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVF-VRAPQAGSYLFPRLPR  344 (405)
T ss_pred             -HHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeEEEEEeCcc
Confidence             57777776643 23456778899999999752 35677888888889999999998877777 5578999999999974


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ..    .++.+++..+++++||.+.||..|+.  .+++||+++.+++++++++++|.+++++++
T Consensus       345 ~~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~  404 (405)
T PRK06207        345 LA----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR  404 (405)
T ss_pred             cC----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence            21    24678888887788999999998864  689999998889999999999999998865

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=4.8e-53  Score=401.46  Aligned_cols=356  Identities=18%  Similarity=0.283  Sum_probs=297.8

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~  117 (419)
                      ..+.++|+|+.|+|.    +++++.+.+++.+.+.......|+++.|.++||++|++|+.+.+|.+++++ +|++|+|++
T Consensus        27 ~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~  102 (388)
T PRK07366         27 AAGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQ  102 (388)
T ss_pred             hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcH
Confidence            347889999999864    566788899998887654456799989999999999999998889889998 699999999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      +++..++++++++||+|++++|+|+.+...++..|.+++.+++++++++.+|++.+.+.+.++++++++++||||||.++
T Consensus       103 ~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~  182 (388)
T PRK07366        103 EGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIA  182 (388)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccC
Confidence            99999999999999999999999999999999999999999997777788899999887777789999999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCC-CCCccccCCC-CcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP-YTPMGLFGSI-VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      +.+++++|+++|++++++||+||+|..+.+++.. .+++..++.. .++|+++||||.|++||+|+||++++.       
T Consensus       183 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-------  255 (388)
T PRK07366        183 PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA-------  255 (388)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCH-------
Confidence            9999999999999999999999999999887643 4445444433 468999999999999999999999865       


Q ss_pred             hhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          276 SGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       276 ~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                       ++++.+...... ..+..+..+.++...+.. ..+++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++.
T Consensus       256 -~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~~~~  331 (388)
T PRK07366        256 -QLIQALRQVKAVVDFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPEATMYVWAKLPE  331 (388)
T ss_pred             -HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEEEECCc
Confidence             688888766542 223323333344444432 25789999999999999999999987 666 4579999999999974


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      ..   ..++.+++.++++++||.+.||+.|+.  .+|+||+++.+++++++++++|++++
T Consensus       332 ~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l  388 (388)
T PRK07366        332 PW---QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL  388 (388)
T ss_pred             cc---CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence            21   013677888888889999999999875  58999999888999999999998763

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-52  Score=397.81  Aligned_cols=376  Identities=22%  Similarity=0.353  Sum_probs=317.2

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      ++.+...+..+.++.....+.  ...++++|+|+.|.|.    +++++.+.+++.+.+.... ..|.++.|.+++|++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia   79 (387)
T PRK08960          7 RRSRDIEPFHVMALLARANEL--EAAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALREAIA   79 (387)
T ss_pred             hHHHhCCchHHHHHHHHHHHH--HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHH
Confidence            445556667777777654332  2247789999999964    5668899999998887543 47988899999999999


Q ss_pred             HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769           95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  174 (419)
                      +++.+.+|.++++++|++|+|++++++.++.+++.+||+|++++|+|+.+...+...|.+++.++++.++++.+|++.++
T Consensus        80 ~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~  159 (387)
T PRK08960         80 GFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVE  159 (387)
T ss_pred             HHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHH
Confidence            99998889899999999999999999999999999999999999999999999999999999999876667889999999


Q ss_pred             HhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC
Q 014769          175 ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW  254 (419)
Q Consensus       175 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  254 (419)
                      +.++++++.+++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++...  .+++++++||||.|
T Consensus       160 ~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~SK~~  236 (387)
T PRK08960        160 RHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFSKYF  236 (387)
T ss_pred             HHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeeccccc
Confidence            99888888999999999999999999999999999999999999999999887643 2333333  35799999999999


Q ss_pred             CCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      +++|+|+||+++++        ++++.+..... ...+++.+.|.++..++......++++.+..++++++.+.+.|+++
T Consensus       237 g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~  308 (387)
T PRK08960        237 GMTGWRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL  308 (387)
T ss_pred             CCcccEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999975        57777776643 3456788999998888875345788899999999999999999987


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                       ++.++..|.+|+|+|++++...    .++.+++.++++++||.+.||+.|+.   .+|+|++++.+.+++.+++++|.+
T Consensus       309 -~~~~~~~p~g~~f~~~~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~  383 (387)
T PRK08960        309 -GFGIAVEPQGAFYLYADISAFG----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIAR  383 (387)
T ss_pred             -CCcCCcCCCeeEEEEEeccccC----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence             6653447899999999987421    25678888888889999999999975   479999998888999999999998


Q ss_pred             HHH
Q 014769          411 FCQ  413 (419)
Q Consensus       411 ~~~  413 (419)
                      +++
T Consensus       384 ~~~  386 (387)
T PRK08960        384 GLR  386 (387)
T ss_pred             HHh
Confidence            764

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-52  Score=399.83  Aligned_cols=373  Identities=22%  Similarity=0.317  Sum_probs=312.3

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      ++.....+..+..+.....+ . +..++++|+|+.|+|.    +++++.+++++.+.+.......|+ +.|..+||++|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia   79 (399)
T PRK07681          7 TRMKAFQSSIFSELGAYKKE-K-IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVT   79 (399)
T ss_pred             HHHhhcCccHHHHHHHHHHH-h-hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHH
Confidence            33444445555555543322 2 2237789999999864    456788889988877654334565 479999999999


Q ss_pred             HHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           95 DYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        95 ~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      +|+.+.+|..+++ ++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.++++++++|.+|++++
T Consensus        80 ~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l  159 (399)
T PRK07681         80 EYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELI  159 (399)
T ss_pred             HHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHH
Confidence            9999988988998 899999999999999999999999999999999999999999999999999997776788999999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCC
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISK  252 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK  252 (419)
                      ++++.++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++....++..+.. .+++|+++||||
T Consensus       160 ~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  239 (399)
T PRK07681        160 PEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSK  239 (399)
T ss_pred             HHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccc
Confidence            9888778899999999999999999999999999999999999999999999887655445444433 357899999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      .|+++|+|+||+++++        ++++.+..... ..++++.+.|.++..+++.. ..++++.++.++++++.+.+.|+
T Consensus       240 ~~~~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~  310 (399)
T PRK07681        240 SYSLAGSRIGYMIGNE--------EIVRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFR  310 (399)
T ss_pred             ccCCccceeEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999864        57888876653 35678889999999999764 36888888999999999999999


Q ss_pred             cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      ++ ++. +..|.+|+|+|++++..     .++.+++.++++++||.+.||..|+.  ++++||+++.+++++++++++|+
T Consensus       311 ~~-g~~-~~~p~~g~f~~~~l~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~  383 (399)
T PRK07681        311 TF-GWN-VDKPAGSMFVWAEIPKG-----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIR  383 (399)
T ss_pred             HC-CCc-ccCCCeeeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHH
Confidence            87 776 55789999999999742     25678888998879999999998875  47999999988899999999998


Q ss_pred             H
Q 014769          410 A  410 (419)
Q Consensus       410 ~  410 (419)
                      +
T Consensus       384 ~  384 (399)
T PRK07681        384 N  384 (399)
T ss_pred             H
Confidence            7

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=1.5e-52  Score=397.90  Aligned_cols=376  Identities=22%  Similarity=0.347  Sum_probs=310.2

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +++..+.....+..+...+. ... ..++++|+|+.|+|.    ++.++.+.+++.+.+.......|++..|.++||+++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~ai   79 (389)
T PRK08068          6 SELLKQLPKQFFASLVAKVN-KKV-AEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAA   79 (389)
T ss_pred             hhHhhhcCccHHHHHHHHHH-HHH-hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Confidence            34455555556665555332 222 236679999999864    455677889988887765566899889999999999


Q ss_pred             HHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           94 ADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        94 a~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      ++|+.+.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++++.++.+|+++
T Consensus        80 a~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~  159 (389)
T PRK08068         80 ADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTK  159 (389)
T ss_pred             HHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHH
Confidence            999998888888998 8999999999999999999999999999999999999999999999999998766678899999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc-cCCCCcEEEEecCC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL-FGSIVPVITLGSIS  251 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~s  251 (419)
                      +++.+.++++++++++||||||.++|.+++++|+++|+++++++|+||+|..+.+++....++.. .+..+++++++|||
T Consensus       160 l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~S  239 (389)
T PRK08068        160 IPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLS  239 (389)
T ss_pred             HHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecch
Confidence            99988778899999999999999999999999999999999999999999998886533333322 23345789999999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      |.|+++|+|+||++++.        ++++.+...... ..+.+++.|.++..++... .+++++.+++++++++.+.+.|
T Consensus       240 K~~g~~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L  310 (389)
T PRK08068        240 KTFNMAGWRVAFAVGNE--------SVIEAINLLQDHLFVSLFGAIQDAAIEALLSD-QSCVAELVARYESRRNAFISAC  310 (389)
T ss_pred             hccCCccceeEeEecCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999864        678888766532 3344556777777777642 4788899999999999999999


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                      +++ ++. +..|.+|+|+|++++..     .++.++...+++++||.|.||..|+.  ++++||+++.+++++.+++++|
T Consensus       311 ~~~-g~~-~~~~~g~~~~~v~~~~~-----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l  383 (389)
T PRK08068        311 REI-GWE-VDAPKGSFFAWMPVPKG-----YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERI  383 (389)
T ss_pred             HHC-CCc-ccCCCeeEEEEEECCCC-----CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHH
Confidence            988 776 55789999999999742     25678888887778999999998875  5799999988889999999998


Q ss_pred             HHH
Q 014769          409 KAF  411 (419)
Q Consensus       409 ~~~  411 (419)
                      +++
T Consensus       384 ~~~  386 (389)
T PRK08068        384 GKL  386 (389)
T ss_pred             HHh
Confidence            763

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=1.3e-52  Score=407.12  Aligned_cols=399  Identities=21%  Similarity=0.335  Sum_probs=310.8

Q ss_pred             CchhhhhCCchhHHHHH---HHHHHhhhcC----CCCCeeeccCCCCCCCC------------CCCC-------------
Q 014769           13 DKQEHKAAPAVTVKTSL---ASIIDSVNKN----DPRPVVPLGYGDPTAFP------------CFRT-------------   60 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~---~~~~~~~~~~----~~~~~i~l~~g~~~~~~------------~~~~-------------   60 (419)
                      +++++.+.+.+....+.   .++.+++.+.    .+.++|+|++|+|....            .+..             
T Consensus        10 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~   89 (481)
T PTZ00377         10 INPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLF   89 (481)
T ss_pred             cCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccC
Confidence            44555555555444443   3333323232    46899999999984100            0111             


Q ss_pred             hHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCCCeEEee
Q 014769           61 AVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLP  137 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vlv~  137 (419)
                      |..+.+++.+.++..  ....|+++.|.++||++|++++.+.+|..+++++|++|+|+++++..++++++ ++||.|+++
T Consensus        90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~  169 (481)
T PTZ00377         90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIP  169 (481)
T ss_pred             CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEEC
Confidence            446667776665542  34579999999999999999999988999999999999999999999999998 799999999


Q ss_pred             CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      +|+|+.|...++..|..++.++++++++|.+|++.+++++++      +++++++++|+||||.++|.+++++|+++|++
T Consensus       170 ~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~  249 (481)
T PTZ00377        170 IPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE  249 (481)
T ss_pred             CCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence            999999999999999999999988777899999999998864      67889999999999999999999999999999


Q ss_pred             CCCeEEEcccccccccCC-CCCCCcc----ccCC----CCcEEEEecCCCc-CCCCCceeEEEEeeC-CCCccchhhHHH
Q 014769          212 LRVMVVADEVYGHLTFGS-IPYTPMG----LFGS----IVPVITLGSISKR-WLVPGWRFGWLVTND-PNGIFQKSGIID  280 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~~-~~~~~~~----~~~~----~~~~i~~~s~sK~-~~~~G~r~G~~~~~~-~~~~~~~~~~~~  280 (419)
                      ++++||+||+|..+.|++ ..+.++.    .+..    ..++++++||||. ++++|+|+||+++.+ +      +++++
T Consensus       250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p------~~li~  323 (481)
T PTZ00377        250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP------PEVRE  323 (481)
T ss_pred             CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC------HHHHH
Confidence            999999999999998853 3333332    1222    1368999999997 588999999998731 1      15788


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHccc---c---hHH---HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEee
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKT---K---EDF---FCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVK  351 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~---~---~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~  351 (419)
                      .+........+++.++|.++..+++..   .   ..+   ..+....++++++.+.+.|++++++. +..|++|+|+|++
T Consensus       324 ~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~gg~fl~~~  402 (481)
T PTZ00377        324 QIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVEGAMYAFPR  402 (481)
T ss_pred             HHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCCeeEEEEee
Confidence            887765444568889999999998631   1   123   33334467899999999999888888 5589999999987


Q ss_pred             cCc--ccc-----cCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          352 LNP--WLL-----EDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       352 ~~~--~~~-----~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      ++.  ...     .+..++.+++..+++++||.+.||+.|+.   .+++|||++.+++++++++++|+++++++.++
T Consensus       403 ~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~  479 (481)
T PTZ00377        403 IELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKK  479 (481)
T ss_pred             ccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHh
Confidence            642  100     00123456778888999999999999974   46999999988899999999999999988765

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.7e-52  Score=395.29  Aligned_cols=371  Identities=23%  Similarity=0.421  Sum_probs=309.0

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      .+..+.....++.++....      ..+++|+|+.|+|.    +++++.+.+++.+.+... ...|+++.|.+++|++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia   76 (384)
T PRK06348          8 KKYQQMEVNIMAEIATLAK------KFPDIIDLSLGDPD----LITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEII   76 (384)
T ss_pred             HHHhcCCccHHHHHHHHHH------hcCCcEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHH
Confidence            3444555566666665321      14578999999864    445667766665554433 458999999999999999


Q ss_pred             HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769           95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  174 (419)
                      +++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|..++.+++.+++++.+|++.++
T Consensus        77 ~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  156 (384)
T PRK06348         77 KYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLE  156 (384)
T ss_pred             HHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHH
Confidence            99998889999999999999999999999999999999999999999999999999999998888765667889999999


Q ss_pred             HhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCc
Q 014769          175 ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKR  253 (419)
Q Consensus       175 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~  253 (419)
                      ++++++++++++++|+||||.++|.+++++|+++|++++++||+||+|.++.+++. ..++..+.. .+++++++||||.
T Consensus       157 ~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~  235 (384)
T PRK06348        157 ALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKD  235 (384)
T ss_pred             HhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhc
Confidence            99887889999999999999999999999999999999999999999999988653 334444432 4589999999999


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      +++||+|+||+++++        ++++.++.... ...+++.+.|.++..++.. ...++++.+..++++++.+.+.|++
T Consensus       236 ~~l~GlRiG~~v~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~  306 (384)
T PRK06348        236 FAMTGWRIGYVIAPD--------YIIETAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIES  306 (384)
T ss_pred             cCCccccceeeecCH--------HHHHHHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999965        57777776653 3467788999999988875 3567888889999999999999998


Q ss_pred             CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                      ++++. +..|++|+|+|++++...    .++.+++..+++++||.+.||+.|+.  .+++||+++.+++++++++++|++
T Consensus       307 ~~~~~-~~~p~gg~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~  381 (384)
T PRK06348        307 IPNLS-LHPPKGSIYAFINIKKTG----LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEK  381 (384)
T ss_pred             CCCce-eccCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHh
Confidence            87766 558899999999987421    25778888888888999999999975  579999998889999999999976


Q ss_pred             H
Q 014769          411 F  411 (419)
Q Consensus       411 ~  411 (419)
                      +
T Consensus       382 ~  382 (384)
T PRK06348        382 M  382 (384)
T ss_pred             h
Confidence            4

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=3.9e-52  Score=396.06  Aligned_cols=369  Identities=24%  Similarity=0.371  Sum_probs=305.4

Q ss_pred             hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769           18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL   97 (419)
Q Consensus        18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l   97 (419)
                      .+.+...+..+.+ ..+...+..|.++|+|+.|+|.    +++++.+++++.+.+.  ....|+++.|.++||++|++|+
T Consensus         6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~   78 (396)
T PRK09147          6 DRLQPYPFEKLRA-LFAGVTPPADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAAWL   78 (396)
T ss_pred             hcCCcchHHHHHH-HHHhhhhccCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHHHH
Confidence            3444445544443 3333334458999999999964    5567888898887764  3468999999999999999999


Q ss_pred             HhhCCCC-CCCC-cEEEcccHHHHHHHHHHHhcCC---CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           98 SRDLPYK-LSAD-DVYVTLGCKQAVEVILSVLARP---GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        98 ~~~~~~~-~~~~-~i~~t~g~~~al~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      ++.+|.. ++++ +|++|+|+++++..++++++++   ||.|++++|+|..+...+...|.+++.++++++++|.+|++.
T Consensus        79 ~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~  158 (396)
T PRK09147         79 ERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDA  158 (396)
T ss_pred             HHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHH
Confidence            9888887 8885 8999999999999999999999   899999999999999999999999999999777778999999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCC-cc---ccC--CCCcEE
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTP-MG---LFG--SIVPVI  245 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~---~~~--~~~~~i  245 (419)
                      +++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|..+.|++. ...+ +.   ..+  ..++++
T Consensus       159 l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi  238 (396)
T PRK09147        159 VPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLV  238 (396)
T ss_pred             HHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEE
Confidence            9888777889999999999999999999999999999999999999999999988653 1111 11   121  236899


Q ss_pred             EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769          246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE  324 (419)
Q Consensus       246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  324 (419)
                      +++||||.|+++|+|+||+++++        ++++.+..... ...+++.+.|.++.+.+..  .+++.+.++.++++++
T Consensus       239 ~~~S~SK~~~~~GlRiG~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~  308 (396)
T PRK09147        239 VFHSLSKRSNVPGLRSGFVAGDA--------ALLKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFD  308 (396)
T ss_pred             EEeccccccCCccceeeeecCCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHH
Confidence            99999999899999999999865        57777776543 2456788888887777753  5788899999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--------CCeEEEEeec
Q 014769          325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------KNWLRIAFCA  396 (419)
Q Consensus       325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~~Ris~~~  396 (419)
                      .+.+.|++.  +. +..|++|+|+|++++.       ++.+++.++++++||.+.||..|+.        .+++||+++.
T Consensus       309 ~~~~~L~~~--~~-~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~  378 (396)
T PRK09147        309 AVTPILAPV--LD-VQLPDAGFYLWAKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA  378 (396)
T ss_pred             HHHHHHHHh--cC-CCCCCeeEEEEEECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC
Confidence            999999874  44 4479999999999872       4678888888889999999998852        4799999988


Q ss_pred             CHHHHHHHHHHHHHHHH
Q 014769          397 EPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       397 ~~~~l~~~l~~l~~~~~  413 (419)
                      +++++++++++|+++++
T Consensus       379 ~~~~l~~~l~rl~~~~~  395 (396)
T PRK09147        379 PLAECVEAAERIVDFCR  395 (396)
T ss_pred             CHHHHHHHHHHHHHHhc
Confidence            89999999999998774

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-51  Score=393.36  Aligned_cols=377  Identities=20%  Similarity=0.324  Sum_probs=305.7

Q ss_pred             CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 014769           20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSR   99 (419)
Q Consensus        20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~   99 (419)
                      .....+..+.. ....+++ .+.++++|+.|+|.    .+.++.+.+++.+.+.......|+++.|..+||+++++|+++
T Consensus        13 ~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~   86 (403)
T PRK08636         13 LPKYVFAEVNE-LKMAARR-AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKR   86 (403)
T ss_pred             CCccHHHHHHH-HHHHHHh-cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence            33334444443 3333332 46789999999875    233555666666665544456899999999999999999999


Q ss_pred             hCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH----H
Q 014769          100 DLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV----E  174 (419)
Q Consensus       100 ~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l----~  174 (419)
                      .+|..++++ +|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++.++++++|++.+    +
T Consensus        87 ~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~  166 (403)
T PRK08636         87 KYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLE  166 (403)
T ss_pred             HhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHH
Confidence            889889998 79999999999999999999999999999999999999999999999999886555678997754    4


Q ss_pred             Hhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC-CcEEEEecC
Q 014769          175 ALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-VPVITLGSI  250 (419)
Q Consensus       175 ~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~  250 (419)
                      ++++   .+++.+++++||||||.++|.+++++|+++|++++++||+||+|..+.+++...+++..++.. +.+++++||
T Consensus       167 ~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~  246 (403)
T PRK08636        167 KALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTL  246 (403)
T ss_pred             HHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEec
Confidence            5443   367888999999999999999999999999999999999999999998876544555555432 457889999


Q ss_pred             CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      ||.|++||+|+||++++.        ++++.+...... ..+++.+.|.++..+++. ...++++.++.++++++.+.+.
T Consensus       247 SK~~~~~GlRiG~iv~~~--------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~  317 (403)
T PRK08636        247 SKSYNMAGWRVGFVVGNK--------KLVGALKKIKSWLDYGMFTPIQVAATIALDG-DQSCVEEIRETYRKRRDVLIES  317 (403)
T ss_pred             ccccCCccceeeeeeCCH--------HHHHHHHHHHHHhcccCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999865        577777766532 356677788888777753 3578888999999999999999


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGR  407 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~  407 (419)
                      |++. ++. +..|.+|+|+|+++++...  ..++.+++.++++++||.+.||..|+.  .+|+||+++.+++++++++++
T Consensus       318 L~~~-~~~-~~~p~~g~~~~~~l~~~~~--~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~r  393 (403)
T PRK08636        318 FANA-GWE-LQKPRASMFVWAKIPEPAR--HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARN  393 (403)
T ss_pred             HHHC-CCc-ccCCCcceEEEEECCCccC--CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHH
Confidence            9987 676 5589999999999975210  113678888888889999999999875  589999999889999999999


Q ss_pred             HHHHHHHH
Q 014769          408 MKAFCQRH  415 (419)
Q Consensus       408 l~~~~~~~  415 (419)
                      |+++++.+
T Consensus       394 l~~~l~~~  401 (403)
T PRK08636        394 IKKFLKEL  401 (403)
T ss_pred             HHHHHHhh
Confidence            99999875

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=8.5e-52  Score=394.01  Aligned_cols=360  Identities=23%  Similarity=0.387  Sum_probs=309.6

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++++|+.|.|.    +++++.+.+++.+.+.... ..|+++.|.+++|+++++++++.+|..+++++|++|+|+++|+
T Consensus        32 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al  106 (402)
T PRK06107         32 GRSIVDLTVGEPD----FDTPDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAI  106 (402)
T ss_pred             cCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence            6789999999964    4557888999998886543 5799999999999999999998889888999999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++.+++++||+|++++|+|..|...+...+..++.++++.++++.+|++.+++.+.++++++++++|+||||.++|.+
T Consensus       107 ~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~  186 (402)
T PRK06107        107 FLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRA  186 (402)
T ss_pred             HHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHH
Confidence            99999999999999999999999988888888888888876556678999999999887889999999999999999999


Q ss_pred             HHHHHHHHHHhC-CCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          201 HLQEIAEMARKL-RVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       201 ~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      ++++|+++|+++ ++++|+||+|+.+.|++...+++..+..  .+++++++||||.|++||+|+||++++.        +
T Consensus       187 ~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~--------~  258 (402)
T PRK06107        187 ELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA--------D  258 (402)
T ss_pred             HHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH--------H
Confidence            999999999998 9999999999998887655555544432  3579999999999989999999999865        5


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.+..... .+.+++.+.|.++..+|+.. ..++++.++.++++++.+.+.|++++++. +..|++|+|+|++++...
T Consensus       259 ~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~g~~-~~~p~gg~~~~~~~~~~~  336 (402)
T PRK06107        259 LIAAINKLQSQSSSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRRDYALALLNAIPGLS-CLVPDGAFYLYVNCAGLI  336 (402)
T ss_pred             HHHHHHHHHHhcccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCcceEEeeeccccc
Confidence            7888877654 35678999999999999753 57888999999999999999999887777 558999999999884210


Q ss_pred             ----ccC--CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          357 ----LED--INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       357 ----~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                          ..+  ..++.+++.++++++||.+.||..|+..+|+|++++.+++++++++++|++.++++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~  401 (402)
T PRK06107        337 GKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAAL  401 (402)
T ss_pred             ccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence                001  12567888889899999999999998889999999988999999999999998765

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=9.6e-52  Score=392.07  Aligned_cols=351  Identities=26%  Similarity=0.419  Sum_probs=302.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~  118 (419)
                      .++++++|+.|+|.    +++++.+.+++.+.+.......|+++.|.+++|+++++|+.+.+|..++++ +|++|+|+++
T Consensus        27 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~  102 (383)
T TIGR03540        27 EGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE  102 (383)
T ss_pred             cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence            47899999999864    456788889988877655556899999999999999999998888888876 6999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      ++..+++.++++||.|++++|+|+.+...++..|.++..+++++++++.+|++++++.+.++++++++++||||||.+++
T Consensus       103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~  182 (383)
T TIGR03540       103 GIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAP  182 (383)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCC
Confidence            99999999999999999999999999999999999999999876667788999999888878999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      .+++++|+++|+++++++|+||+|.++.+++...+++..+.. .+++++++||||.|+++|+|+||++++.        +
T Consensus       183 ~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~--------~  254 (383)
T TIGR03540       183 LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA--------D  254 (383)
T ss_pred             HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH--------H
Confidence            999999999999999999999999998887655555555443 3468999999999999999999999865        5


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.+..... ...+++.+.|.++..++... .+++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|+++++. 
T Consensus       255 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~~~~~~l~~~-  330 (383)
T TIGR03540       255 LIAGLGKVKTNVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPKATFYVWVPVPEG-  330 (383)
T ss_pred             HHHHHHHHHHhcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCCcceEEEEECCCC-
Confidence            7777776543 24566778899998888764 5788888999999999999999988 777 55788999999999742 


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                          .++.+++.++++++||.+.||..|+.  ++++||+++.+++++++++++|++
T Consensus       331 ----~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~  382 (383)
T TIGR03540       331 ----YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK  382 (383)
T ss_pred             ----CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence                25778888888889999999999875  479999999888999999998864

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-51  Score=390.73  Aligned_cols=351  Identities=25%  Similarity=0.400  Sum_probs=301.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~  118 (419)
                      .+.++++|+.|+|.    +++++.+.+++.+.+.......|+++.|.+++|+++++|+++.+|..++++ +|++|+|+++
T Consensus        29 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~  104 (385)
T PRK09276         29 RGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE  104 (385)
T ss_pred             cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence            37789999999864    456788899998887654456899999999999999999998888888887 5999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      ++..++.+++++||+|++++|+|+.+...++..|.+++.++++.+.++.+|++.+++.+.++++++++++|+||||.++|
T Consensus       105 ~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  184 (385)
T PRK09276        105 GIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVAD  184 (385)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999876667888999998888778899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      .+++++|+++|+++++++|+||+|..+.+++....++..++. .+++++++||||.|+++|+|+||+++++        +
T Consensus       185 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~--------~  256 (385)
T PRK09276        185 LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA--------D  256 (385)
T ss_pred             HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH--------H
Confidence            999999999999999999999999999887655555555543 3568999999999999999999999865        5


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.+..... ...+.+.+.|.++..++.. ...++++.+++++++++.+.+.|+++ ++. +..|++|+|+|++++.. 
T Consensus       257 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~v~~~~~-  332 (385)
T PRK09276        257 LIAGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPKATFYVWAPVPKG-  332 (385)
T ss_pred             HHHHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEECCCC-
Confidence            7777776543 3445677788888888864 35788899999999999999999987 776 55788999999999742 


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                          .+..+++.++++++||.+.||..|+.  ++++||+++.+++++.+++++|.+
T Consensus       333 ----~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~  384 (385)
T PRK09276        333 ----YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK  384 (385)
T ss_pred             ----CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence                25778888888888999999998875  479999999888999999999864

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2e-51  Score=390.64  Aligned_cols=353  Identities=23%  Similarity=0.366  Sum_probs=299.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCc-EEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD-VYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~t~g~~~  118 (419)
                      .|.++|+|+.|+|.    .++++.+.+++.+.+.......|+++.|.++||+++++|+++.+|..+++++ |++|+|+++
T Consensus        33 ~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~  108 (394)
T PRK05942         33 QGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE  108 (394)
T ss_pred             cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence            47789999999865    3445667777766665444568999999999999999999988888888884 899999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      ++..++.+++++||+|++++|+|+.+...+...|.+++.++++.+++|.+|++++++.+.++++++++++|+||||.++|
T Consensus       109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s  188 (394)
T PRK05942        109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAP  188 (394)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCC
Confidence            99999999999999999999999999888889999999999876667889999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      .+++++|+++|+++++++|+||+|..+.+++....++..+.. .+.+++++||||.|+++|+|+||++++.        +
T Consensus       189 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~--------~  260 (394)
T PRK05942        189 REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR--------H  260 (394)
T ss_pred             HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH--------H
Confidence            999999999999999999999999999887654445444432 3457889999999999999999999864        6


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.++.... ...+++.+.|.++..+++. ..+++++.+++++++++.+.+.|+++ ++. +..|++|+|+|++++.. 
T Consensus       261 l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~f~~~~~~~~-  336 (394)
T PRK05942        261 IIQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGEL-GWN-IPPTKATMYLWVPCPVG-  336 (394)
T ss_pred             HHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeeEEEEECCCC-
Confidence            7888876653 3456788889999999874 35788889999999999999999887 676 55788999999999742 


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                          .++.+++.++++++||.+.||..|+.  .+|+|++++.+.+.+.+++++|.++-
T Consensus       337 ----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~  390 (394)
T PRK05942        337 ----MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQAG  390 (394)
T ss_pred             ----CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHhh
Confidence                25677888888889999999998864  57999999877889999999987653

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=2.8e-51  Score=390.24  Aligned_cols=360  Identities=21%  Similarity=0.355  Sum_probs=301.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~  118 (419)
                      .+.++|+|+.|+|.    +++++.+.+++.+.+.......|+++.|.++||+++++++.+++|..++++ +|++|+|+++
T Consensus        28 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~  103 (405)
T PRK09148         28 AGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE  103 (405)
T ss_pred             cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence            37789999999864    455778888888877554556899999999999999999998888888887 8999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      ++..++.+++++||+|++++|+|+.+...+...|.++..++++.++++..+++...+...++++.+++++||||||.++|
T Consensus       104 al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s  183 (405)
T PRK09148        104 GFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVAD  183 (405)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCC
Confidence            99999999999999999999999999989999999999999876555544555544444457889999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      .+++++|+++|+++++++|+||+|..+.|++...+++..+.. .+++++++||||.|++||+|+||++++.        +
T Consensus       184 ~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~--------~  255 (405)
T PRK09148        184 LDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE--------R  255 (405)
T ss_pred             HHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCH--------H
Confidence            999999999999999999999999999887654444544432 3457889999999999999999999865        6


Q ss_pred             HHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.+...... ..+++.+.|.++..+|+.. ..++++.+..++++++.+.+.|+++ ++. +..|++|+|+|++++...
T Consensus       256 ~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~l~~~~  332 (405)
T PRK09148        256 LIAALTRVKSYLDYGAFTPIQVAATAALNGP-QDCIAEMRELYKKRRDVLVESFGRA-GWD-IPPPAASMFAWAPIPEAF  332 (405)
T ss_pred             HHHHHHHHHHHhccCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cCCCCeeEEEEEECCCcc
Confidence            78888776543 4567888999999999752 5788889999999999999999987 666 547899999999987421


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .  ..+..++...+++++||.|.||..|+.  .+|+||+++.+++++.+++++|.+++.++.
T Consensus       333 ~--~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~~  392 (405)
T PRK09148        333 R--HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSSAD  392 (405)
T ss_pred             C--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence            0  013567888888889999999999875  579999998889999999999999998763

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-51  Score=391.85  Aligned_cols=383  Identities=23%  Similarity=0.399  Sum_probs=319.0

Q ss_pred             ccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCC
Q 014769            7 NKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI   86 (419)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~   86 (419)
                      |+.+-+.+.+..+.....++.+.+...      ..+++|+|+.|+|.    +++++.+.+++.+.+... ...|.+..|.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~   72 (391)
T PRK08361          4 KKRKYFIAGRINLIQRSKIRELFERAS------KMENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGI   72 (391)
T ss_pred             cccccchhHHHHhCCccHHHHHHHHHH------hhcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCc
Confidence            344445555565556666666554321      13578999999965    445788889988877654 3479888999


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW  166 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  166 (419)
                      +++|+++++++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|..+...+...|.+++.+++++++++
T Consensus        73 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  152 (391)
T PRK08361         73 PELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEF  152 (391)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCC
Confidence            99999999999988888899999999999999999999999999999999999999999999999999999998776678


Q ss_pred             ccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769          167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT  246 (419)
Q Consensus       167 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (419)
                      .+|++.+++.++++++++++++|+||||.++|.+++++|+++|+++++++|+||+|.++.+++....++..+. .+++++
T Consensus       153 ~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~  231 (391)
T PRK08361        153 QPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTIL  231 (391)
T ss_pred             CCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEE
Confidence            8999999999988889999999999999999999999999999999999999999999887654444443333 247899


Q ss_pred             EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAE  324 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~  324 (419)
                      ++||||.|+++|+|+||+++++        ++++.+..... ..++++.+.|.++..+++... .+++++.+++++++++
T Consensus       232 ~~s~SK~~~~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~  303 (391)
T PRK08361        232 ANSFSKTFAMTGWRLGFVIAPE--------QVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRK  303 (391)
T ss_pred             EecCchhcCCcHhhhhhhccCH--------HHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence            9999999999999999999965        57777765543 346678889999999997643 3578899999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHH
Q 014769          325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALK  402 (419)
Q Consensus       325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~  402 (419)
                      .+.+.|++++++. +..|++|+|+|++++...    .++.+++..+++++||.+.||..|+.  ++++||+++.++++++
T Consensus       304 ~~~~~L~~~~~~~-~~~p~g~~~~~~~l~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~  378 (391)
T PRK08361        304 LVLKRLKEMPHIK-VFEPKGAFYVFANIDETG----MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLI  378 (391)
T ss_pred             HHHHHHHhCCCCe-ecCCCEEEEEEEECCCCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHH
Confidence            9999999887877 558899999999997421    25778888887888999999998875  5799999988889999


Q ss_pred             HHHHHHHHHHHH
Q 014769          403 DGLGRMKAFCQR  414 (419)
Q Consensus       403 ~~l~~l~~~~~~  414 (419)
                      +++++|++++++
T Consensus       379 ~al~~l~~~l~~  390 (391)
T PRK08361        379 EAMERMEKALEE  390 (391)
T ss_pred             HHHHHHHHHHhc
Confidence            999999998865

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=3.5e-51  Score=388.70  Aligned_cols=378  Identities=20%  Similarity=0.387  Sum_probs=311.1

Q ss_pred             hhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769           16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD   95 (419)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   95 (419)
                      +........++.+.... .++. ..++++++|+.|.|.    +++++.+.+++.+.+... ...|+++.|.+++|+++++
T Consensus         6 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~   78 (388)
T PRK07337          6 RVDAIEPFYVMELAKEA-QALE-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAA   78 (388)
T ss_pred             HhHhcCchHHHHHHHHH-HHHH-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence            33444455555555433 3332 247789999999864    455688888888887643 3579998999999999999


Q ss_pred             HHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHH
Q 014769           96 YLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA  175 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~  175 (419)
                      |+++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.++++.++++.+|++++++
T Consensus        79 ~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~  158 (388)
T PRK07337         79 WYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEA  158 (388)
T ss_pred             HHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHh
Confidence            99988898899999999999999999999999999999999999999999889999999999998766678899999999


Q ss_pred             hhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769          176 LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL  255 (419)
Q Consensus       176 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  255 (419)
                      .+.++++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+++.. .+...+  .+++++++||||.|+
T Consensus       159 ~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~~S~SK~~~  235 (388)
T PRK07337        159 AWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITINSFSKYFN  235 (388)
T ss_pred             hcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEEEechhhcC
Confidence            99888999999999999999999999999999999999999999999998876542 222222  356899999999999


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                      ++|+|+||+++++        ++++.+.... ....+.+.+.|.++..++.....+++.+.+..++++++.+.+.|+++ 
T Consensus       236 ~~G~RiG~~~~~~--------~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-  306 (388)
T PRK07337        236 MTGWRLGWLVVPE--------ALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-  306 (388)
T ss_pred             CchhheeeeecCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            9999999999865        5777777665 33456788899998888875444567788899999999999999987 


Q ss_pred             CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                      ++.+...|++|+|+|++++.....+..++.+++.++++++||.|.||..|+.   .+|+||+++.+++++++++++|.++
T Consensus       307 ~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~  386 (388)
T PRK07337        307 GFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKL  386 (388)
T ss_pred             CCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHH
Confidence            6653347899999999997421111125678888888889999999999975   5799999988899999999999987


Q ss_pred             H
Q 014769          412 C  412 (419)
Q Consensus       412 ~  412 (419)
                      +
T Consensus       387 l  387 (388)
T PRK07337        387 F  387 (388)
T ss_pred             h
Confidence            5

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=8.5e-51  Score=387.65  Aligned_cols=393  Identities=24%  Similarity=0.405  Sum_probs=308.1

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      +.....++..+..+.. ..+.. +..+.++|+|+.|+|..+ .+++++.+.+++.+.+..  ...|+++.|.++||++++
T Consensus         8 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia   82 (404)
T PRK09265          8 SKLENVCYDIRGPVLK-EAKRL-EEEGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIM   82 (404)
T ss_pred             HHHHhcCcchhHHHHH-HHHHH-HHcCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHH
Confidence            3333444443333333 33333 345889999999998754 356778888888776643  357999999999999999


Q ss_pred             HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769           95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  174 (419)
                      +++.+....++++++|++|+|+++++..++.+++++||+|++++|+|..+...+...|..++.++++.+.++.+|++.++
T Consensus        83 ~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~  162 (404)
T PRK09265         83 QYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIR  162 (404)
T ss_pred             HHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHH
Confidence            99986544478999999999999999999999999999999999999999999998999988888765556789999999


Q ss_pred             HhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC
Q 014769          175 ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW  254 (419)
Q Consensus       175 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  254 (419)
                      +++.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.|++....++..+....++++++||||.|
T Consensus       163 ~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~  242 (404)
T PRK09265        163 SKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAY  242 (404)
T ss_pred             HhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhc
Confidence            99888889999999999999999999999999999999999999999999988765555555555445789999999999


Q ss_pred             CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      ++||+|+||++++.+..+.  ..+++.+........+++.++|.++..+|..... +.+.+..+++.++++.+.+.|+++
T Consensus       243 ~~pGlRiG~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~  320 (404)
T PRK09265        243 RVAGFRVGWMVLSGPKKHA--KGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI  320 (404)
T ss_pred             cCcccceEEEEEeCchHHH--HHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999975432111  1244444433233456788899999999864221 112222346778889999999888


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                      +++. +..|++|+|+|++++.... +..++.+++.+++.++||.|.||..|+.  ++++|++++.+++++++++++|+++
T Consensus       321 ~~~~-~~~p~~g~~l~~~~~~~~~-~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~  398 (404)
T PRK09265        321 PGVS-CVKPKGALYAFPKLDPKVY-PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRF  398 (404)
T ss_pred             CCCc-ccCCCcceEEEEEeccccc-CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            7877 5589999999999875211 1124566677778899999999999863  6899999988899999999999999


Q ss_pred             HHHHh
Q 014769          412 CQRHT  416 (419)
Q Consensus       412 ~~~~~  416 (419)
                      ++.+.
T Consensus       399 l~~~~  403 (404)
T PRK09265        399 LSGYR  403 (404)
T ss_pred             HHHhc
Confidence            98653

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=3.5e-51  Score=387.58  Aligned_cols=353  Identities=25%  Similarity=0.444  Sum_probs=301.5

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAV  120 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al  120 (419)
                      +++|+|+.|.|.    +++++.+.+++.+.+... ...|++..|.+++|+++++++.+.+|..++++ +|++|+|+++++
T Consensus        20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al   94 (378)
T PRK07682         20 EGVISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL   94 (378)
T ss_pred             CCeEEeCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            578999999975    345667788888877643 45799889999999999999999888888886 799999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++.+++++||+|++++|+|+.+...++..|.+++.++++.++++.+|++.+++++.++++++++++|+||||.++|.+
T Consensus        95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~  174 (378)
T PRK07682         95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS  174 (378)
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence            99999999999999999999999999999999999888876656788999999999988889999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      ++++|+++|+++++++|+||+|..+.+++. +.++..+.. .+++++++||||.|++||+|+||++++.        +++
T Consensus       175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~i  245 (378)
T PRK07682        175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YFS  245 (378)
T ss_pred             HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HHH
Confidence            999999999999999999999999988753 223333322 3579999999999999999999999865        577


Q ss_pred             HHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          280 DSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       280 ~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      +.+...... ..+++.+.|.++..+|+.. ..++++.++.++++++.+.+.|+++ ++. +..|++|+|+|+.++...  
T Consensus       246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~~~~~~~~--  320 (378)
T PRK07682        246 EAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAFPSISSTG--  320 (378)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEEEeccCCC--
Confidence            877765432 4567888999999999764 3568888999999999999999988 777 558899999999885321  


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                        .++.+++.++++++||.+.||..|+.  ++++||+++.+++++++++++|+++++++
T Consensus       321 --~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        321 --LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             --CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence              25778888888788999999998875  58999999888999999999999998764

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.3e-51  Score=385.90  Aligned_cols=353  Identities=28%  Similarity=0.461  Sum_probs=302.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      .+++|+|+.|+|.    +++++.+.+++.+.+.+.. ..|+++.|.+++|+++++++.+.+|..+++++|++|+|+++++
T Consensus        23 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al   97 (382)
T PRK06108         23 REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL   97 (382)
T ss_pred             cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH
Confidence            4578999999964    5667899999998877643 4699999999999999999998888889999999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ..++.+++++||+|++++|+|..+...++..|.+++.++++.+ .+|.+|++.+++.++++++++++++|+||||.+++.
T Consensus        98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~  177 (382)
T PRK06108         98 MLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASR  177 (382)
T ss_pred             HHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCH
Confidence            9999999999999999999999999999999999999998653 457799999999988788999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccC-CCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFG-SIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      +++++|+++|+++|+++|+||+|..+.++ +...+++..+ ...+++++++||||.|+++|+|+||+++++        +
T Consensus       178 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--------~  249 (382)
T PRK06108        178 DDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP--------A  249 (382)
T ss_pred             HHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH--------H
Confidence            99999999999999999999999999886 3333332232 234579999999999999999999999865        5


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.+..... ...+++.+.|.++..++... .+++++.+++++++++.+.+.|++++++. +..|++|+|+|++++.. 
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~~g~~~~~~l~~~-  326 (382)
T PRK06108        250 LGQVLEKLIEYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVE-VAKPDGAMYAFFRIPGV-  326 (382)
T ss_pred             HHHHHHHHHHhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCCC-
Confidence            7777766543 24567888999999999764 56788889999999999999998887887 55789999999998742 


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                          .+..+++.++++++||.+.||..|+.  .+++|++++.+++++++++++|+++++
T Consensus       327 ----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        327 ----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA  381 (382)
T ss_pred             ----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence                25678888888889999999998864  589999998899999999999998875

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=3.7e-52  Score=368.71  Aligned_cols=349  Identities=27%  Similarity=0.425  Sum_probs=301.1

Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHH
Q 014769           47 LGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILS  125 (419)
Q Consensus        47 l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~  125 (419)
                      |+.|.|    ++++|+.+.+++.+++.....++|....|.++|+++|++.+...+|....++ +|++|.|+.+++..+++
T Consensus        36 LgqGfp----~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~  111 (420)
T KOG0257|consen   36 LGQGFP----DFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL  111 (420)
T ss_pred             ccCCCC----CCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence            999985    5788999999999999887788999999999999999999999887776664 69999999999999999


Q ss_pred             HhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc------CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          126 VLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL------PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       126 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      .++++||+|++.+|.|..|....++.|..++.++..      ...+|.+|.+.++.++.++|++|++++||||||.+++.
T Consensus       112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR  191 (420)
T KOG0257|consen  112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR  191 (420)
T ss_pred             HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence            999999999999999999999999999999999987      45678999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      ++|++|+++|++||+++|+||+|..+.|++..+..+..+ +..++++.++|+||+|++.|||+||++.+.        .+
T Consensus       192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------~L  263 (420)
T KOG0257|consen  192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------HL  263 (420)
T ss_pred             HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------Hh
Confidence            999999999999999999999999999998755555443 556689999999999999999999999954        35


Q ss_pred             HHHHHhhh-ccccCCchHHHHHHHHHHcccch-------HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769          279 IDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE-------DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV  350 (419)
Q Consensus       279 ~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  350 (419)
                      ...++... +..+..+++.|.|.+.++.....       .+..++...++++++.+.+.|.++ |+. +..|++++|+|+
T Consensus       264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~-v~~p~gayyl~a  341 (420)
T KOG0257|consen  264 YSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK-VTGPEGAYYLWA  341 (420)
T ss_pred             hhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-cccCCCceEEEE
Confidence            56666553 44567788888888777765321       345558999999999999999999 998 669999999999


Q ss_pred             ecCccc-------ccCCCCHHHHHHHHHHhcCeEeecCCCCCCC-------CeEEEEeecCHHHHHHHHHHHH
Q 014769          351 KLNPWL-------LEDINDDIEFALKLAKEESVIVTPGIYVGLK-------NWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       351 ~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~-------~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      +++...       .....++..+..+++++.|+.+.|++.|+.+       +.+|++++.+.+.++.++++++
T Consensus       342 dfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~  414 (420)
T KOG0257|consen  342 DFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK  414 (420)
T ss_pred             eccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence            998210       1112356778999999999999999999974       4677777888899999999988

>PRK07324 transaminase; Validated

Probab=100.00  E-value=2.7e-51  Score=386.15  Aligned_cols=347  Identities=26%  Similarity=0.391  Sum_probs=299.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .+.++++|+.|+|.    ++.++.+ +++.+++..... .|+++.|.++||++|++++.     ++++++|++|+|++++
T Consensus        24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a   92 (373)
T PRK07324         24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA   92 (373)
T ss_pred             ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence            48899999999864    4555666 777777766544 89999999999999999984     3678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++.+++++||+|+++.|+|..+...++..|.+++.++++++++|.+|++.++++++++++++++++|+||||.+++.
T Consensus        93 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~  172 (373)
T PRK07324         93 NFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDR  172 (373)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999877778899999999888889999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|+++|+++|+++|+||+|..+.+++. .+++...  .+++|+++||||.|+++|+|+||++++.        +++
T Consensus       173 ~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~~--------~li  241 (373)
T PRK07324        173 AYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAANE--------EVI  241 (373)
T ss_pred             HHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecCH--------HHH
Confidence            9999999999999999999999999887653 3333332  3468999999999999999999999854        578


Q ss_pred             HHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          280 DSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       280 ~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      +.++..... +.+++.+.|.++..+++. ...+++++++.++++++.+.+.|++.+++. +..|.+|+++|+.++..   
T Consensus       242 ~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~gg~~~~i~~~~~---  316 (373)
T PRK07324        242 DILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKPKAVSTSFVKLDVD---  316 (373)
T ss_pred             HHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECCCceEEEEEEeCCC---
Confidence            888877543 456778888888888864 356788888999999999999998877776 44889999989888642   


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                        .++.+++.++++++||.+.||+.|+.++++||+++.+++.+++++++|+++++++
T Consensus       317 --~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~  371 (373)
T PRK07324        317 --MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF  371 (373)
T ss_pred             --CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence              2578899999899999999999999889999999888999999999999999875

>PLN02231 alanine transaminase

Probab=100.00  E-value=6.2e-51  Score=395.17  Aligned_cols=383  Identities=19%  Similarity=0.298  Sum_probs=300.8

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC--C-CCCCCCCCCCCHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS--G-KFNCYATNSGIPPARRAI   93 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~Y~~~~g~~~lr~~i   93 (419)
                      ..|....-+++++..    +   ..+++|+|+.|.+    .+|. ..+ +...+.+..  + ....|+++.|.+++|++|
T Consensus       111 ~~~~~~~~~r~v~~~----~---~~p~~i~~~~~~~----~fp~-~~i-~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaI  177 (534)
T PLN02231        111 LGQQPITFFREVLAL----C---DHPSLLDKSETHG----LFSA-DAI-ERAWQILDQIPGRATGAYSHSQGIKGLRDAI  177 (534)
T ss_pred             cCCCccHHHHHHHHh----c---cCCccCCCCCccc----cCCH-HHH-HHHHHHHHhcCCccccCcCCCCCcHHHHHHH
Confidence            345555555555542    2   2468899986543    3443 344 444455554  2 356799999999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      ++|+.+++|..+++++|++|+|+++++..++++++. +||+|+++.|+|+.|...+...|..++.++++++++|++|+++
T Consensus       178 A~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~  257 (534)
T PLN02231        178 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISE  257 (534)
T ss_pred             HHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHH
Confidence            999999889999999999999999999999999984 7999999999999999999999999999999877789999999


Q ss_pred             HHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC-CCCCCCccccC------
Q 014769          173 VEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG-SIPYTPMGLFG------  239 (419)
Q Consensus       173 l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~------  239 (419)
                      |++++++      ++++++++||+||||.+++.+++++|+++|+++|++||+||+|..+.|+ +..+.++..+.      
T Consensus       258 Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~  337 (534)
T PLN02231        258 LKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYG  337 (534)
T ss_pred             HHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccc
Confidence            9998764      5788999999999999999999999999999999999999999999995 34444443321      


Q ss_pred             -CCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHccc-----c-hH-
Q 014769          240 -SIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKT-----K-ED-  310 (419)
Q Consensus       240 -~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-----~-~~-  310 (419)
                       .+.++++++||||.+ +++|+|+||+++...     ++++++.+........+++...|.++..+++..     . .. 
T Consensus       338 ~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~  412 (534)
T PLN02231        338 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGF-----TSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESY  412 (534)
T ss_pred             cCCceEEEEeccCcccccCCccceEEEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHH
Confidence             123689999999975 789999999987421     025777776655444566778888888888532     1 12 


Q ss_pred             --HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeec--Ccccc-----cCCCCHHHHHHHHHHhcCeEeecC
Q 014769          311 --FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL--NPWLL-----EDINDDIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       311 --~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~--~~~~~-----~~~~~~~~~~~~ll~~~gv~v~~g  381 (419)
                        +..+.++.++++++.+.+.|++++++. +..|+||+|+|+++  +....     .+..++..++.+++++.||.+.||
T Consensus       413 ~~~~~~i~~~~~~r~~~l~~~L~~~~gi~-~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPG  491 (534)
T PLN02231        413 MAEKDGILSSLARRAKTLEDALNSLEGVT-CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPG  491 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCC
Confidence              233457889999999999999988888 45899999999655  32100     001134456788888999999999


Q ss_pred             CCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          382 IYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       382 ~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      +.|+.   ..+||++++.+++++++++++|.++++++.++
T Consensus       492 s~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~~~  531 (534)
T PLN02231        492 SGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFMDE  531 (534)
T ss_pred             cccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99985   34799999989999999999999999887654

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.1e-50  Score=383.33  Aligned_cols=358  Identities=22%  Similarity=0.313  Sum_probs=299.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC-CCCC-cEEEcccH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK-LSAD-DVYVTLGC  116 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~-~i~~t~g~  116 (419)
                      ..+.++|+|+.|.|.    +++++.+.+++.+.+.......|++ .|..+||+++++|+++.+|.. ++++ +|++|+|+
T Consensus        41 ~~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs  115 (410)
T PRK06290         41 HPDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGS  115 (410)
T ss_pred             cCCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCH
Confidence            357789999999964    4567788888887765444557885 899999999999999988887 8886 79999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769          117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV  196 (419)
Q Consensus       117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  196 (419)
                      ++++..++.+++++||.|+++.|+|+.+...++..|.++..+++++++++.+|++.+++++.++++++++++||||||.+
T Consensus       116 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v  195 (410)
T PRK06290        116 KPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAV  195 (410)
T ss_pred             HHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcC
Confidence            99999999999999999999999999999999999999999999877778889999998888788999999999999999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      +|.+++++|+++|++++++||+||+|.++.+++.. .++..+.. .+++|+++||||.|+++|+|+||++++.       
T Consensus       196 ~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~-~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~-------  267 (410)
T PRK06290        196 ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP-LSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE-------  267 (410)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC-cChhcCCCccccEEEEeechhhcCCchhheEeEEeCH-------
Confidence            99999999999999999999999999998886532 33333332 3467999999999999999999999865       


Q ss_pred             hhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          276 SGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       276 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                       ++++.+..... ...+++.++|.++..++++  .++.++.+++++++++.+.+.|+++ ++. +..|++|+|+|++++.
T Consensus       268 -~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~f~l~v~lp~  342 (410)
T PRK06290        268 -LIVKAFATVKDNNDSGQFIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFK-AEMPGGTFYLYVKAPK  342 (410)
T ss_pred             -HHHHHHHHHHhccccCCcHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCeeeEEEEECCC
Confidence             57777776653 2345567889999999976  4678888999999999999999987 776 5578999999999975


Q ss_pred             ccccC--CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769          355 WLLED--INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       355 ~~~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ....+  ..++.+++.+|+++.+|.+.||+.|+  +|+||+++   .++++.++.++.|++.+.++.
T Consensus       343 ~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~  407 (410)
T PRK06290        343 GTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE  407 (410)
T ss_pred             ccccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence            32100  12577899999888788888988664  79999997   467899999999999887653

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=1.3e-50  Score=385.35  Aligned_cols=347  Identities=24%  Similarity=0.398  Sum_probs=293.3

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC--CCCC-cEEEccc
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK--LSAD-DVYVTLG  115 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~--~~~~-~i~~t~g  115 (419)
                      ..+.++|+|+.|.|.    +++++.+++++.+.+.  ....|+++.|.+++|+++++|+++.+|.+  ++++ +|++|+|
T Consensus        25 ~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~G   98 (393)
T TIGR03538        25 PASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNG   98 (393)
T ss_pred             hcCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCC
Confidence            357899999999964    4567889999988764  34689999999999999999999987775  6885 7999999


Q ss_pred             HHHHHHHHHHHhcCCCCe--EEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769          116 CKQAVEVILSVLARPGAN--VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC  193 (419)
Q Consensus       116 ~~~al~~~~~~l~~~gd~--vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt  193 (419)
                      +++++..++++++++||+  |++++|+|..+...+...|.+++.+++++++++.+|++++++++.++++++++++|||||
T Consensus        99 a~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPt  178 (393)
T TIGR03538        99 TREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPT  178 (393)
T ss_pred             cHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCc
Confidence            999999999999999986  999999999999999999999999998767778899999998887788999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCCc----cccC--CCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPM----GLFG--SIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~----~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      |.+++.+++++|+++|+++|++||+||+|..+.+++. ...+.    ...+  ..+++|+++||||.|+++|+|+||+++
T Consensus       179 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~  258 (393)
T TIGR03538       179 GAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG  258 (393)
T ss_pred             CcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEec
Confidence            9999999999999999999999999999999887642 22221    1121  245799999999998999999999998


Q ss_pred             eCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769          267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS  345 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  345 (419)
                      +.        ++++.+..... ...+++.+.|.++...+..  .+++++.+..++++++.+.+.|+++  +. +..|++|
T Consensus       259 ~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~gg  325 (393)
T TIGR03538       259 DA--------EILKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV--LD-LELPDAG  325 (393)
T ss_pred             CH--------HHHHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh--Cc-ccCCCee
Confidence            65        57777776654 2456788888888777754  5788889999999999999999874  33 3479999


Q ss_pred             EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--------CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------KNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                      +|+|++++.       ++.+++.++++++||.+.||+.|+.        .+++||+++.+++++++++++|+++
T Consensus       326 ~f~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  392 (393)
T TIGR03538       326 FYLWPKVPG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF  392 (393)
T ss_pred             EEEEEECCC-------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence            999999871       4677888888889999999998852        4799999987899999999999875

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=2.8e-50  Score=383.64  Aligned_cols=364  Identities=27%  Similarity=0.499  Sum_probs=304.0

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      ..+.++|+|+.|.|... .+++++.+.+++.+.+... ...|+++.|..+||+++++|+.+.+|.++++++|++|+|+++
T Consensus        27 ~~~~~~i~l~~g~p~~~-~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~  104 (398)
T PRK08363         27 KKGIKVIRLNIGDPVKF-DFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTE  104 (398)
T ss_pred             hcCCCeEEEeCCCCCcC-CCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence            35789999999998632 4667889999999888654 347988899999999999999998898999999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      ++..++.+++++||+|++++|+|..+...++..|..++.++...++++.+|++.++++++++++++++++|+||||.+++
T Consensus       105 al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  184 (398)
T PRK08363        105 ALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYE  184 (398)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcC
Confidence            99999999999999999999999999999999998887773333456778999999998888899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      .+++++|+++|+++|+++|+||+|..+.+++. ..++..+....++++++||||.|++||+|+||+++.++.      ++
T Consensus       185 ~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~------~~  257 (398)
T PRK08363        185 KKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPE------GK  257 (398)
T ss_pred             HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcH------HH
Confidence            99999999999999999999999999887653 234445555567999999999999999999999983221      34


Q ss_pred             HHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          279 IDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       279 ~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                      ++.+...    .....+++.+.|.++..+|.. ..+++++.+++++++++.+.+.|++++++. +..|.+|+|+|++++.
T Consensus       258 ~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~~~l~~  335 (398)
T PRK08363        258 LAEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPRIEE  335 (398)
T ss_pred             HHHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE-ecCCCeEEEEEEEecc
Confidence            4444332    222356788999999998875 357888999999999999999999887776 5588999999998874


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ..   ..++.+++.+++.++||.|.||+.|+.  ++|+||+++.+++++++++++|++++++.+
T Consensus       336 ~~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~~  396 (398)
T PRK08363        336 GP---WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRERL  396 (398)
T ss_pred             CC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence            21   114567777888899999999999875  479999998888999999999999987753

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=5.2e-50  Score=379.83  Aligned_cols=375  Identities=22%  Similarity=0.418  Sum_probs=312.9

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      .+.+......++.++..+.      ..+++|+|+.|.|.    +++++.+.+++.+.+... ...|++..|..+||++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia   75 (387)
T PRK07683          7 PRVKDIQISGIRQFSNMVQ------NYDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAAC   75 (387)
T ss_pred             HHHHhCCccHHHHHHHHHH------hcCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHH
Confidence            3455556666666665321      14678999999864    456788889999887653 358998899999999999


Q ss_pred             HHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           95 DYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        95 ~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      +++.+.+|.+++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+. +++.+|.+.+
T Consensus        76 ~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l  154 (387)
T PRK07683         76 NFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEAL  154 (387)
T ss_pred             HHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHH
Confidence            99998888888998 999999999999999999999999999999999999999999999999998753 4677888999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCC
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISK  252 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK  252 (419)
                      ++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++.. .++..+ +..+++++++||||
T Consensus       155 ~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~vi~~~s~SK  233 (387)
T PRK07683        155 ENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH-TSIAHFPEMREKTIVINGLSK  233 (387)
T ss_pred             HHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc-CChhhccCCcCCeEEEeeccc
Confidence            9988888899999999999999999999999999999999999999999998876533 344444 23457999999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      .|++||+|+||++++.        ++++.+...... ..+++.+.|.++..++++. ..++++.+.+++++++.+.+.|+
T Consensus       234 ~~~~pGlRiG~i~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~  304 (387)
T PRK07683        234 SHSMTGWRIGFLFAPS--------YLAKHILKVHQYNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLI  304 (387)
T ss_pred             cccCccceeEEEEcCH--------HHHHHHHHHHHhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999865        577777765432 3456778899999999764 35678888999999999999998


Q ss_pred             cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      +. ++. +..|++|+|+|+.++...    .++.+++..+++++||.+.||+.|+.  ++++||+++.+++++.+++++|.
T Consensus       305 ~~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~  378 (387)
T PRK07683        305 SM-GLD-VEKPTGAFYLFPSIGHFT----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLE  378 (387)
T ss_pred             Hc-CCc-ccCCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHH
Confidence            87 676 558899999999886421    24677888888899999999998865  58999999888999999999999


Q ss_pred             HHHHHHhc
Q 014769          410 AFCQRHTK  417 (419)
Q Consensus       410 ~~~~~~~~  417 (419)
                      +++++.+|
T Consensus       379 ~~l~~~~~  386 (387)
T PRK07683        379 AFLQQKAK  386 (387)
T ss_pred             HHHHhhcc
Confidence            99987654

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=1.4e-50  Score=386.65  Aligned_cols=347  Identities=20%  Similarity=0.246  Sum_probs=285.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      .++++++|+.|+|.    +++++.+.+++.+.+...    ....|+++.|.++||++|++|+.+.+|.++++++|++|+|
T Consensus        32 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~G  107 (409)
T PRK07590         32 PEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDG  107 (409)
T ss_pred             CCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCC
Confidence            46789999999864    556788888888877642    3458988899999999999999888899999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCE-----------EEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          116 CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE-----------VRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       116 ~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      +++++..++. ++.+||+|++++|+|+.+...++..|..           ++.+++++++++.++.+.      ++++++
T Consensus       108 a~~al~~l~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~~~k~i  180 (409)
T PRK07590        108 AKCDTGNILD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------EKVDII  180 (409)
T ss_pred             HHHHHHHHHH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------cCceEE
Confidence            9999998754 5589999999999999999999999986           888888655556555432      478899


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      ++++||||||.+++.+++++|+++|++++++||+||+|..+.+++....++..++. .+++|+++||||.|++||+|+||
T Consensus       181 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~  260 (409)
T PRK07590        181 YLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAY  260 (409)
T ss_pred             EEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEE
Confidence            99999999999999999999999999999999999999998886644444555543 24689999999999999999999


Q ss_pred             EEeeCCCCccchhhHHHH------------HHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769          264 LVTNDPNGIFQKSGIIDS------------IKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~------------l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      +++++        ++++.            +..... ...+++.+.|.++..++......++++.++.++++++.+.+.|
T Consensus       261 ~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L  332 (409)
T PRK07590        261 TVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGL  332 (409)
T ss_pred             EEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            99965        35541            111112 1235788899999888875445788889999999999999999


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                      +++ ++. +..|.+|+|+|++++..     .++.+++.++++++||.+.||+.|+.  .+++||+++.+++++++++++|
T Consensus       333 ~~~-~~~-~~~~~g~~f~wi~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl  405 (409)
T PRK07590        333 ESA-GFE-VYGGVNAPYIWVKTPDG-----MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERI  405 (409)
T ss_pred             Hhc-CCc-eecCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHH
Confidence            987 676 54788999999999742     24678888888889999999998875  4799999877899999999999


Q ss_pred             HHHH
Q 014769          409 KAFC  412 (419)
Q Consensus       409 ~~~~  412 (419)
                      .+++
T Consensus       406 ~~~~  409 (409)
T PRK07590        406 KKAL  409 (409)
T ss_pred             HhhC
Confidence            8753

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6e-50  Score=381.45  Aligned_cols=385  Identities=27%  Similarity=0.458  Sum_probs=320.9

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +++....++..+..+..-. +.+.. .+.++++|+.|+|.    +++++.+.+++.+.+.+.. ..|++..|..+||+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~i   77 (393)
T PRK05764          5 SKRVSRVTPSATLAVTAKA-KELKA-QGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPELREAI   77 (393)
T ss_pred             hhhhhhcCchHHHHHHHHH-HHHHh-ccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHHHHHHH
Confidence            4455566677766665533 33322 36789999999975    4567889999988876543 3699989999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++++.+.+|.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.++..+++++++++.+|++.+
T Consensus        78 a~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  157 (393)
T PRK05764         78 AAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQL  157 (393)
T ss_pred             HHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHH
Confidence            99999888888899999999999999999999999999999999999999999999999999999987666788999999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc--CCCCcEEEEecCC
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--GSIVPVITLGSIS  251 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~s  251 (419)
                      +++++++++++++++|+||||.++|.+++++|+++|+++++++|+||+|..+.+++....++..+  +..+++++++|||
T Consensus       158 ~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S  237 (393)
T PRK05764        158 EAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFS  237 (393)
T ss_pred             HHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCc
Confidence            99998788999999999999999999999999999999999999999999988866544444333  2345789999999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      |.++++|+|+||++++.        ++++.+..... ...+++.+.|.++..+++. ..+++++.++.++++++.+.+.|
T Consensus       238 K~~~~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L  308 (393)
T PRK05764        238 KAYAMTGWRLGYAAGPK--------ELIKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGL  308 (393)
T ss_pred             ccccCccceeEEEecCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999764        57777776643 3457788999999999873 35778888899999999999999


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                      ++++++. +..|++|+|+|+.++........++.++...+++++||.+.||..|+..+++||+++.+++++++++++|.+
T Consensus       309 ~~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~  387 (393)
T PRK05764        309 NEIPGLE-CPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIER  387 (393)
T ss_pred             hhCCCCc-ccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHH
Confidence            9887887 557899999999887531111113578888888889999999999988899999998889999999999999


Q ss_pred             HHHHH
Q 014769          411 FCQRH  415 (419)
Q Consensus       411 ~~~~~  415 (419)
                      +++++
T Consensus       388 ~~~~~  392 (393)
T PRK05764        388 FLESL  392 (393)
T ss_pred             HHHhh
Confidence            98754

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=3.7e-50  Score=380.47  Aligned_cols=349  Identities=22%  Similarity=0.387  Sum_probs=295.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~a  119 (419)
                      .+++|+|+.|.|.    +++++.+.+++.+.+... ...|+++.|.+++|+++++++++.+|...++ ++|++|+|++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a  102 (384)
T PRK12414         28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG  102 (384)
T ss_pred             hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence            5679999999964    456788889988877654 3589999999999999999999988877766 689999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++++++.+||+|++++|+|..+...++..|.+++.+++++ +++.+|++.++++++++++++++++|+||||.+++.
T Consensus       103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~  181 (384)
T PRK12414        103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA  181 (384)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999998754 357899999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++++|+++|+++++++|+||+|..+.|++....++..+.. .+++++++||||.|++||+|+||+++++        ++
T Consensus       182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~l  253 (384)
T PRK12414        182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------EL  253 (384)
T ss_pred             HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------HH
Confidence            99999999999999999999999999887654444444432 4579999999999999999999999875        57


Q ss_pred             HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      ++.+..... ...+++.+.|.++..+|+..  .+..+.+..++++++.+.+.|++. ++. +..|.+|+|+|++++... 
T Consensus       254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~~~-  328 (384)
T PRK12414        254 MDEIRKVHQFMVFSADTPMQHAFAEALAEP--ASYLGLGAFYQRKRDLLARELAGS-RFE-LLPSEGSFFMLARFRHFS-  328 (384)
T ss_pred             HHHHHHHHhheecCCCcHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCcceEEEEcccccC-
Confidence            777777653 34677889999999999763  344567788999999999999987 676 558889999999886421 


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                       . .++.+++.++++++||.+.||+.|+.    .+++||+++.+++++++++++|.+
T Consensus       329 -~-~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~  383 (384)
T PRK12414        329 -D-ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS  383 (384)
T ss_pred             -C-CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence             0 14667887888889999999998853    479999998889999999999974

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=4.9e-50  Score=380.71  Aligned_cols=355  Identities=25%  Similarity=0.395  Sum_probs=299.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a  119 (419)
                      ..++|+|+.|.|.    .+.++.+.+++.+.+... ...|+++.|.+++|+++++++.+.+|..++++ +|++|+|++++
T Consensus        25 ~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a   99 (387)
T PRK08912         25 EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEA   99 (387)
T ss_pred             hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHH
Confidence            4578999999975    334567778877776543 35799999999999999999998889889998 99999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++.+++++||+|++++|+|+.+...++..|.+++.+++++ +++.+|++.+++.+.++++++++++|+||||.++|.
T Consensus       100 l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~  178 (387)
T PRK08912        100 LAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPR  178 (387)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCH
Confidence            9999999999999999999999999999999999999998753 357899999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++++|+++|+++++++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++        ++
T Consensus       179 ~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~  250 (387)
T PRK08912        179 EELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP--------PL  250 (387)
T ss_pred             HHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH--------HH
Confidence            99999999999999999999999998887644444444332 3578999999999999999999999865        57


Q ss_pred             HHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          279 IDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       279 ~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      ++.+...... .++.++..|.++..++.. ..+++++.+++++++++.+.+.|+.+ ++. +..|++|+|+|++++....
T Consensus       251 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~g~~~l~~~l~~~~~  327 (387)
T PRK08912        251 LRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRI-GFP-VLPSQGTYFLTVDLAPLGL  327 (387)
T ss_pred             HHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEecccccCC
Confidence            7777665432 355666778888777753 35778889999999999999999987 777 5578899999999874210


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                        ..++.+++.++++++||.+.||..|+.    .+|+||+++.+++++++++++|++++++
T Consensus       328 --~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~  386 (387)
T PRK08912        328 --AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR  386 (387)
T ss_pred             --CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence              125678888888889999999998853    5899999988899999999999988764

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-49  Score=377.58  Aligned_cols=357  Identities=23%  Similarity=0.336  Sum_probs=303.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~a  119 (419)
                      .+++++|+.|.|.    +++++.+.+++.+.+.......|++..|.+++|+++++++.+.+|..++ +++|++|+|++++
T Consensus        26 ~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~  101 (389)
T PRK05957         26 NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMA  101 (389)
T ss_pred             CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHH
Confidence            3578999999864    5667889999988876555568999999999999999999988888777 7899999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++.+++++||.|++++|+|..+...++..|.+++.++.+  .++.+|++.++++++++++++++++|+||||.++|.
T Consensus       102 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~  179 (389)
T PRK05957        102 FMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPE  179 (389)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCH
Confidence            999999999999999999999999988888999999998864  457899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++++|+++|+++|+++|+||+|.++.+++....+...+ +...++|+++||||.|+++|+|+||+++++        ++
T Consensus       180 ~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~  251 (389)
T PRK05957        180 ALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI--------HL  251 (389)
T ss_pred             HHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH--------HH
Confidence            999999999999999999999999998865432233232 344579999999999999999999999865        68


Q ss_pred             HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      ++++..... ...+++.+.|.++..+++.. ..++++..+.++++++.+.+.|++++++..+..|++|+|+|++++..  
T Consensus       252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~--  328 (389)
T PRK05957        252 LEAIKKIQDTILICPPVVSQYAALGALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD--  328 (389)
T ss_pred             HHHHHHHHhhcccCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCC--
Confidence            888877654 24566778999988888753 36788888889999999999999876642255789999999998642  


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                         .++.+++.++++++||.+.||+.|+.  ++|+||+++ .+++++++++++|.+.++++..
T Consensus       329 ---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~  388 (389)
T PRK05957        329 ---LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ  388 (389)
T ss_pred             ---CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence               25788999988889999999999875  469999996 5889999999999999987653

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-49  Score=379.21  Aligned_cols=379  Identities=26%  Similarity=0.417  Sum_probs=310.8

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY   96 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   96 (419)
                      ..+.....++.+...... .. ..+.++++|+.|.|.    +++++.+.+++.+...  ....|++..|.+++|++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ia~~   78 (397)
T PRK07568          7 VLNMPASPIRKLVPYADE-AK-KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELREAFAKY   78 (397)
T ss_pred             hhhCCcchHHHHHHHHHH-HH-hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHHHHHH
Confidence            344455566666543321 11 125679999999864    4557888888877643  345799999999999999999


Q ss_pred             HHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc-cChHHHHH
Q 014769           97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE-VDLDAVEA  175 (419)
Q Consensus        97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~l~~  175 (419)
                      +. .+|.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++.+.++. .+++.+++
T Consensus        79 ~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~  157 (397)
T PRK07568         79 YK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEK  157 (397)
T ss_pred             HH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHH
Confidence            98 47888899999999999999999999999999999999999999988889999999999886545554 36789999


Q ss_pred             hhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcC
Q 014769          176 LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRW  254 (419)
Q Consensus       176 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~  254 (419)
                      +++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++....++..+.. .+++++++||||.|
T Consensus       158 ~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~  237 (397)
T PRK07568        158 LITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRY  237 (397)
T ss_pred             hcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhc
Confidence            98888899999999999999999999999999999999999999999999887654445544443 46799999999999


Q ss_pred             CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                      +++|+|+||++++++       ++++.+........+++.+.|.++..+++.. ..++++.+..++++++.+.+.|++++
T Consensus       238 ~~~G~R~G~~~~~~~-------~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~  309 (397)
T PRK07568        238 SACGARIGCLISKNK-------ELIAAAMKLCQARLSPPTLEQIGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIP  309 (397)
T ss_pred             cCCCcceEEEecCCH-------HHHHHHHHHhhccCCCCcHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999998542       4666665443334577888999999999753 57888899999999999999999887


Q ss_pred             CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHh-----cCeEeecCCCCCC-----CCeEEEEeecCHHHHHHH
Q 014769          335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE-----ESVIVTPGIYVGL-----KNWLRIAFCAEPSALKDG  404 (419)
Q Consensus       335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~~  404 (419)
                      ++. +..|.+|+|+|++++..      ++.++..+++++     +||.+.||..|+.     .+++||+++.++++++++
T Consensus       310 ~~~-~~~p~g~~~~~~~l~~~------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~  382 (397)
T PRK07568        310 GVV-CEKPKGAFYIIAKLPVD------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRA  382 (397)
T ss_pred             Cce-ecCCCcceEEEEecCCC------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHH
Confidence            776 55889999999998741      467788887764     6999999998842     469999998788999999


Q ss_pred             HHHHHHHHHHHhccC
Q 014769          405 LGRMKAFCQRHTKKH  419 (419)
Q Consensus       405 l~~l~~~~~~~~~~~  419 (419)
                      +++|.++++++.+||
T Consensus       383 ~~~l~~~l~~~~~~~  397 (397)
T PRK07568        383 MEILKEALEKYNKRK  397 (397)
T ss_pred             HHHHHHHHHHhhccC
Confidence            999999999988775

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=1e-49  Score=378.41  Aligned_cols=377  Identities=23%  Similarity=0.266  Sum_probs=313.3

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +++..+..+..++.+.+++ +.+. +.+.+.|+|+.|+|.    .++++.+.+++.+.+.......|++..|.++||+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~i   76 (386)
T PRK07550          3 NPLIAALFPPPIPEVRAWL-AGYD-GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAY   76 (386)
T ss_pred             chhhhhcCChHHHHHHHHH-HHHh-hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHH
Confidence            3455566666777777654 3332 347789999999974    345788888888877554556898889999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++++.++.+|++.+
T Consensus        77 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l  156 (386)
T PRK07550         77 AAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAA  156 (386)
T ss_pred             HHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHH
Confidence            99999988988999999999999999999999999999999999999999999999999999999987666778899999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCC
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISK  252 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK  252 (419)
                      +++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++... +...++++++||||
T Consensus       157 ~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  236 (386)
T PRK07550        157 EALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSK  236 (386)
T ss_pred             HHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchh
Confidence            99998888999999999999999999999999999999999999999999887654322222222 23457899999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      .++++|+|+||+++++        ++++.+..... ...+++.+.|.++..+++. ..+++++.++.++++++.+.+.|.
T Consensus       237 ~~g~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~  307 (386)
T PRK07550        237 SYALTGHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFA  307 (386)
T ss_pred             hccCcccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9988999999999865        57777776653 3456788899999999875 357788888999999999999998


Q ss_pred             cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-cCHHHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-AEPSALKDGLGRM  408 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-~~~~~l~~~l~~l  408 (419)
                      .++++. + .|.+|+|+|++++...    .++.+++.++++++||.+.||..|+.  ++++||+++ .+++++++++++|
T Consensus       308 ~~~~~~-~-~~~g~~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l  381 (386)
T PRK07550        308 RLPGWE-L-LASGAYFAYVRHPFPD----RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERL  381 (386)
T ss_pred             hCCCce-e-CCCceEEEEecCCCCC----CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHH
Confidence            865654 3 5778999999987411    25788888888889999999999864  579999997 5789999999999


Q ss_pred             HHH
Q 014769          409 KAF  411 (419)
Q Consensus       409 ~~~  411 (419)
                      .++
T Consensus       382 ~~~  384 (386)
T PRK07550        382 RAF  384 (386)
T ss_pred             Hhh
Confidence            875

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=2.1e-49  Score=376.17  Aligned_cols=375  Identities=21%  Similarity=0.404  Sum_probs=306.5

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      ++....+...++++...+..      .+++|+|+.|.|.    +++++.+.+++.+.+... ...|+++.|.+++|++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia   77 (391)
T PRK07309          9 KQLDKIEVSLIRQFDQSISD------IPGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAA   77 (391)
T ss_pred             hhhhhcCccHHHHHHHHHHh------cCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHH
Confidence            33444455555555443311      3679999999974    445678888888877643 347999899999999999


Q ss_pred             HHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           95 DYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        95 ~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      +++.+.++..+++ ++|++|+|++++++.++.+++.+||+|++++|+|..+...++..|.+++.++.+. .++.+|++.+
T Consensus        78 ~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l  156 (391)
T PRK07309         78 DFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEML  156 (391)
T ss_pred             HHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHH
Confidence            9999888887775 7999999999999999999999999999999999999999999999999988753 4567999999


Q ss_pred             HHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769          174 EALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI  250 (419)
Q Consensus       174 ~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  250 (419)
                      +++++.   +++++++++|+||||.+++.+++++|+++|+++++++|+|++|..+.+++....++..+. .+++++++||
T Consensus       157 ~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~  235 (391)
T PRK07309        157 EKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGL  235 (391)
T ss_pred             HHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecC
Confidence            988864   578899999999999999999999999999999999999999999998665444444433 2579999999


Q ss_pred             CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      ||.|+++|+|+||++++.        ++++.+..... ...+++.+.|.++..++++.. .+....+..++++++.+.+.
T Consensus       236 SK~~g~~GlRvG~~v~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~  306 (391)
T PRK07309        236 SKSHAMTGWRIGLIFAPA--------EFTAQLIKSHQYLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEK  306 (391)
T ss_pred             hhhccCccceeEEEEeCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999875        57777776543 235678889999999997642 33456678889999999999


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGR  407 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~  407 (419)
                      |+++ ++. +..|++|+|+|++++...   ..++.+++.++++++||.+.||..|+.  +++|||+++.+.+++++++++
T Consensus       307 l~~~-~~~-~~~p~gg~~~~~~l~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~  381 (391)
T PRK07309        307 MTDL-GFK-IIKPDGAFYIFAKIPAGY---NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKR  381 (391)
T ss_pred             HHHC-CCe-ecCCCeeEEEEEECCCCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence            9887 676 558899999999887521   124677888888889999999998875  679999998788999999999


Q ss_pred             HHHHHHHHh
Q 014769          408 MKAFCQRHT  416 (419)
Q Consensus       408 l~~~~~~~~  416 (419)
                      |+++++++.
T Consensus       382 l~~~~~~~~  390 (391)
T PRK07309        382 LKEYMEEHA  390 (391)
T ss_pred             HHHHHHhhc
Confidence            999998764

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=4.1e-50  Score=386.58  Aligned_cols=361  Identities=20%  Similarity=0.355  Sum_probs=291.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh-----C------CCCCCCCCCCCCHHHHHHHHHHHHhhCCC--CCCC
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR-----S------GKFNCYATNSGIPPARRAIADYLSRDLPY--KLSA  107 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~-----~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~--~~~~  107 (419)
                      +..+|+|+.+.+.    ++ .+.+.+.+.....     .      .....|+++.|.++||++||+|+.++++.  .+++
T Consensus        37 p~g~i~L~~~En~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~  111 (468)
T PLN02450         37 PSGIIQMGLAENQ----LS-FDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP  111 (468)
T ss_pred             CCeeEEeehhHhH----hh-HHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence            4468999999743    22 2555555443211     0      12346999999999999999999987764  4789


Q ss_pred             CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCcccChHHHHHhhcC------C
Q 014769          108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALADK------N  180 (419)
Q Consensus       108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~  180 (419)
                      ++|++|+|+++++..++.+++++||.|++++|+|+.+...+. ..|.+++.++++.++++.++++.+++++.+      +
T Consensus       112 ~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~  191 (468)
T PLN02450        112 NKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLK  191 (468)
T ss_pred             HHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999987777 589999999987667788899999887753      6


Q ss_pred             ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc---------CCCCcEEEEecCC
Q 014769          181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---------GSIVPVITLGSIS  251 (419)
Q Consensus       181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~s~s  251 (419)
                      ++++++++||||||.++|.+++++|+++|++++++||+||+|+.+.|++..+.++...         +..+++++++|||
T Consensus       192 ~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S  271 (468)
T PLN02450        192 VKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS  271 (468)
T ss_pred             eeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence            7889999999999999999999999999999999999999999988876544343221         1346899999999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHH
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      |.|+++|+|+||++++++       .+.+.+..... ...++.+.|.++..+|+...  ..++++++++++++++.+.+.
T Consensus       272 K~~~l~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~  343 (468)
T PLN02450        272 KDLGLPGFRVGAIYSNDE-------MVVSAATKMSS-FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSG  343 (468)
T ss_pred             ccCCCCCccEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999752       24555554432 34568899999999998743  247888899999999999999


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccc-cCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-cCHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLL-EDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-AEPSALKDGL  405 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-~~~~~l~~~l  405 (419)
                      |+++ ++. +..|++|+|+|++++.... ....+..++..++++++||.+.||+.|+.  ++||||+++ .+++++++++
T Consensus       344 L~~~-gi~-~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l  421 (468)
T PLN02450        344 LEAA-GIK-CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAM  421 (468)
T ss_pred             HHHc-CCc-ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHH
Confidence            9988 777 5589999999999874211 01112356778888889999999999875  689999998 4899999999


Q ss_pred             HHHHHHHHHHh
Q 014769          406 GRMKAFCQRHT  416 (419)
Q Consensus       406 ~~l~~~~~~~~  416 (419)
                      ++|++++++..
T Consensus       422 ~ri~~~l~~~~  432 (468)
T PLN02450        422 KRLKSFVESDS  432 (468)
T ss_pred             HHHHHHHHhcc
Confidence            99999997765

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=1e-49  Score=349.79  Aligned_cols=355  Identities=22%  Similarity=0.365  Sum_probs=314.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      .++++.|.+.+    ++|+.+|.+++|+.+.++.+.+ +|+  .+..++-++|++|.+++++..++++.|++++|..-++
T Consensus        24 ~~DvlPmWVAD----MDf~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi   96 (388)
T COG1168          24 NEDVLPMWVAD----MDFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI   96 (388)
T ss_pred             CCCcceeeeec----ccCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence            47899999998    6799999999999999988765 787  4668899999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCcccChHHHHHhhcCC-ccEEEEeCCCCccccCCC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALADKN-TAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~-~~~v~i~~p~nptG~~~~  198 (419)
                      ..++++++++||.|++..|.|+++....+..|.++...|+.. ++.|.+|++.|++++.+. .++.++||||||||.+.+
T Consensus        97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt  176 (388)
T COG1168          97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT  176 (388)
T ss_pred             HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence            999999999999999999999999999999999999999874 455788999999988765 588999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC--CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI--VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      +++|.+|.++|.+||+.||+||+|+.+.+.|..+.++..++..  ++.+++.|.||+|.++|+++++++.++++      
T Consensus       177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~------  250 (388)
T COG1168         177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRE------  250 (388)
T ss_pred             HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHH------
Confidence            9999999999999999999999999999999766666665544  57899999999999999999999998743      


Q ss_pred             hHHHHHHh-hh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecC
Q 014769          277 GIIDSIKD-CL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLN  353 (419)
Q Consensus       277 ~~~~~l~~-~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~  353 (419)
                       +..++.+ .. ....++|.++..|...++.++ ..|+++..+.++.+++++.+.+.+ +|++. +..|+|.+.+|+++.
T Consensus       251 -lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~gTYL~WLD~r  327 (388)
T COG1168         251 -LRAKFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQGTYLAWLDCR  327 (388)
T ss_pred             -HHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCCCceeeeeecc
Confidence             3233322 22 335688999999999999875 699999999999999999999997 79999 669999999999997


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ...    .++.++...++.+.+|.+.+|..||.  .+++|++++++++.+++++++|+.++++.
T Consensus       328 ~l~----l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~~  387 (388)
T COG1168         328 ELG----LDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKKR  387 (388)
T ss_pred             ccC----CChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence            653    25678889999999999999999986  58999999999999999999999888753

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-49  Score=374.13  Aligned_cols=347  Identities=22%  Similarity=0.373  Sum_probs=285.1

Q ss_pred             HHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEE
Q 014769           32 IIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVY  111 (419)
Q Consensus        32 ~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~  111 (419)
                      +.....+.++.++++|+.|.|.    +++++.+.+++.+...  ....|+++.|..+||+++++++++++|.++++++|+
T Consensus        14 ~~~~~~~~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~   87 (374)
T PRK05839         14 LLKEITPNKEYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELI   87 (374)
T ss_pred             HHHHhhhcCCCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEE
Confidence            4444434457799999999864    4567888888877653  356899999999999999999999889889999999


Q ss_pred             EcccHHHHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769          112 VTLGCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      +|+|+++++..++.+++  .+||.|++++|+|+.+...+...|++++.+++++++++.+|++...  + ++++++++++|
T Consensus        88 it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP  164 (374)
T PRK05839         88 PTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSP  164 (374)
T ss_pred             EecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCC
Confidence            99999999999988874  4789999999999999999999999999999876667777765433  2 36899999999


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc------CCCCcEEEEecCCCcCCCCCceeEE
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF------GSIVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      |||||.++|.+++++|+++|+++|+++|+||+|.++.+++ ..+++...      ...+++|+++||||.|++||+|+||
T Consensus       165 ~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~  243 (374)
T PRK05839        165 NNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGF  243 (374)
T ss_pred             CCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEE
Confidence            9999999999999999999999999999999999976543 22232211      1235899999999999999999999


Q ss_pred             EEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ++++.        ++++.++.... ...+.+.+.|.++..++..  .+++++.+++++++++.+.+.|    ++.   .|
T Consensus       244 ii~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l----~~~---~p  306 (374)
T PRK05839        244 IAGDA--------SILKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL----GIT---IP  306 (374)
T ss_pred             EecCH--------HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc----CCC---CC
Confidence            99864        57777776643 3456788888888877754  5778888889999988887765    332   68


Q ss_pred             CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      ++|+|+|++++        +..+++.++++++||.|.||..|+.    ++|+||+++.+++++.+++++|+++++
T Consensus       307 ~gg~fi~~~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        307 PATFYVWLPVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE  373 (374)
T ss_pred             CeeEEEEEeCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence            89999999986        3568888887779999999988864    489999998789999999999998874

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1.1e-49  Score=380.50  Aligned_cols=362  Identities=20%  Similarity=0.371  Sum_probs=294.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh-------C----CCCCCCCCCCCCHHHHHHHHHHHHhhCC--CCCCC
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR-------S----GKFNCYATNSGIPPARRAIADYLSRDLP--YKLSA  107 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~-------~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~  107 (419)
                      +..+|+|+....     ......+.+.+.+...       .    .....|.++.|.++||+++|++++++++  ..+++
T Consensus        46 p~g~i~l~~aeN-----~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p  120 (447)
T PLN02607         46 PSGVIQMGLAEN-----QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDP  120 (447)
T ss_pred             CCceEEEechhh-----hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCH
Confidence            445999999973     3456666666655432       0    1234688889999999999999998776  36899


Q ss_pred             CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCcccChHHHHHhhcC------C
Q 014769          108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALADK------N  180 (419)
Q Consensus       108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~  180 (419)
                      ++|++|+|+++++..++.++++|||.|+++.|+|+++...+. ..|++++.++++.++++.++++.++++++.      +
T Consensus       121 ~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~  200 (447)
T PLN02607        121 DRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIR  200 (447)
T ss_pred             HHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999999999987665 578899999887666788999999988753      6


Q ss_pred             ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc----C--C-CCcEEEEecCCCc
Q 014769          181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF----G--S-IVPVITLGSISKR  253 (419)
Q Consensus       181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~----~--~-~~~~i~~~s~sK~  253 (419)
                      +++++++||+||||.++|.+++++|+++|+++++++|+||+|..+.|++..+.++..+    +  . .++++++.||||.
T Consensus       201 vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~  280 (447)
T PLN02607        201 VRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKD  280 (447)
T ss_pred             eeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhc
Confidence            7889999999999999999999999999999999999999999988876555554332    1  1 3579999999999


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhh
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      |+++|+|+||+++.++       +++..++.... ...++.+.|.++..+|+...  ..++++++++++++++.+.+.|+
T Consensus       281 fg~~GlRvG~ivs~n~-------~l~~~~~~~~~-~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~  352 (447)
T PLN02607        281 LGLPGFRVGTIYSYND-------KVVTTARRMSS-FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLR  352 (447)
T ss_pred             CCCCcceEEEEEEcCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998542       46666655433 23568889999999998743  35778889999999999999999


Q ss_pred             cCCCCCCCCCCCceEEEEeecCccccc-CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeec-CHHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLE-DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCA-EPSALKDGLGR  407 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~-~~~~l~~~l~~  407 (419)
                      +. ++. +..|++|+|+|++++..... ......++..++++++||.+.||..|+.  ++|+||+++. +++++++++++
T Consensus       353 ~~-gi~-~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~R  430 (447)
T PLN02607        353 RA-GIE-CLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKR  430 (447)
T ss_pred             hC-CCC-cccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHH
Confidence            87 777 45789999999999742110 0112346777888888999999999875  6899999985 89999999999


Q ss_pred             HHHHHHHHhc
Q 014769          408 MKAFCQRHTK  417 (419)
Q Consensus       408 l~~~~~~~~~  417 (419)
                      |.++++++.+
T Consensus       431 i~~~l~~~~~  440 (447)
T PLN02607        431 IHRFMDRRKT  440 (447)
T ss_pred             HHHHHHHHHh
Confidence            9999987654

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=2.1e-49  Score=375.83  Aligned_cols=350  Identities=21%  Similarity=0.321  Sum_probs=299.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a  119 (419)
                      +.++|+|+.|.|.    ++.++.+.+++.+.+... ...|++..|.+++|+++++++.+.++...+++ +|++|+|++++
T Consensus        29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a  103 (386)
T PRK09082         29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA  103 (386)
T ss_pred             hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence            4578999999864    455778888888877654 35799999999999999999998888777775 89999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++.+++.+||+|++++|+|..+...++..|.+++.++++. .++.+|++.+++.++++++++++++|+||||.+++.
T Consensus       104 l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~  182 (386)
T PRK09082        104 LFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSA  182 (386)
T ss_pred             HHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999999864 357899999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++++|+++|+++++++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||++++.        ++
T Consensus       183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~--------~l  254 (386)
T PRK09082        183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA--------AL  254 (386)
T ss_pred             HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH--------HH
Confidence            99999999999999999999999999887654445444433 4689999999999999999999999865        67


Q ss_pred             HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      ++.++.... ..++++.+.|.++..+++. ..+++++.+..++++++.+.+.|++. ++. +..|++|+|+|++++..  
T Consensus       255 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~g~~~~~~~~~~~--  329 (386)
T PRK09082        255 SAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFK-LLPCEGTYFQLVDYSAI--  329 (386)
T ss_pred             HHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCeeEEEEEecccc--
Confidence            787777653 3567899999999999874 35778888999999999999999986 777 55789999999998741  


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                      .+ .++.+++.++++++||.+.||+.|+.    .+++|++++.+++++++++++|++
T Consensus       330 ~~-~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~  385 (386)
T PRK09082        330 SD-LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ  385 (386)
T ss_pred             CC-CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence            01 25778888888899999999998853    479999998889999999999975

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=5.4e-49  Score=373.60  Aligned_cols=354  Identities=27%  Similarity=0.433  Sum_probs=297.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a  119 (419)
                      ..++++|+.|.|..    +.++.+.+++.+.+... ...|+++.|.+++|+++++++.+.+|...+++ +|++|+|++++
T Consensus        23 ~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a   97 (387)
T PRK07777         23 RTGAVNLGQGFPDE----DGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEA   97 (387)
T ss_pred             hCCeEEccCCCCCC----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence            45789999999763    33456777777776543 35799989999999999999988888888886 79999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      +..++.+++.+||+|+++.|+|..+...++..|..++.++++++ .++.+|++.+++.++++++++++++|+||||.+++
T Consensus        98 l~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  177 (387)
T PRK07777         98 IAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLT  177 (387)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCC
Confidence            99999999999999999999999999999999999999988765 36789999999998888899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      .+++++|+++|+++++++|+||+|.++.|++....++..+.. .+++++++||||.|+++|+|+||++++.        +
T Consensus       178 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~  249 (387)
T PRK07777        178 AAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA--------P  249 (387)
T ss_pred             HHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH--------H
Confidence            999999999999999999999999999886654444444432 4578999999999999999999999865        5


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.+..... .....+.+.|.++..++... ..++++.++.++++++.+.+.|+++ ++. +..|++++|+|++++...
T Consensus       250 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~g~~~~~~~~~~~~  326 (387)
T PRK07777        250 LIAAVRAAKQYLTYVGGAPFQPAVAHALDHE-DAWVAALRDSLQAKRDRLAAGLAEA-GFE-VHDSAGTYFLCADPRPLG  326 (387)
T ss_pred             HHHHHHHHHhhcccCCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhC-CCC-ccCCCcceEEEecccccC
Confidence            7777776543 24456777888888888653 5778888999999999999999987 777 557889999999875311


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC-----CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL-----KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                         ..++.+++.+|++++||.|.||..|+.     .+++||+++.+++++++++++|+++..
T Consensus       327 ---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~  385 (387)
T PRK07777        327 ---YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRG  385 (387)
T ss_pred             ---CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence               125688999998889999999998863     468999998889999999999988764

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1.8e-49  Score=383.04  Aligned_cols=386  Identities=18%  Similarity=0.340  Sum_probs=295.5

Q ss_pred             hCCchhHHHHHHHHHHh-hhcCC-CCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHH-------hCCCCCCCCCCCCCHH
Q 014769           19 AAPAVTVKTSLASIIDS-VNKND-PRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAV-------RSGKFNCYATNSGIPP   88 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~-~~~~~-~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~-------~~~~~~~Y~~~~g~~~   88 (419)
                      -.+++.....-+..... +.... +..+|+|+......  .+. ..+.+.+.....+       .......|++..|.++
T Consensus        21 ~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~   98 (496)
T PLN02376         21 HGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQL--CLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKK   98 (496)
T ss_pred             cCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhh--hHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHH
Confidence            34445555544333332 11112 34689999985320  011 2344444332211       0123446888999999


Q ss_pred             HHHHHHHHHHhhCC--CCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCC
Q 014769           89 ARRAIADYLSRDLP--YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERN  165 (419)
Q Consensus        89 lr~~ia~~l~~~~~--~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~  165 (419)
                      ||++||+|+.+.+|  +.+++++|++|+|++++++.++.++++|||.|++++|+|+.+...+. ..|++++.++++.+++
T Consensus        99 LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~  178 (496)
T PLN02376         99 FRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDN  178 (496)
T ss_pred             HHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCcc
Confidence            99999999998877  66899999999999999999999999999999999999999988776 5899999999876667


Q ss_pred             cccChHHHHHhh------cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-
Q 014769          166 WEVDLDAVEALA------DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-  238 (419)
Q Consensus       166 ~~~~~~~l~~~~------~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-  238 (419)
                      ++++++.++.++      ..+++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.|++..+.++..+ 
T Consensus       179 ~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~  258 (496)
T PLN02376        179 FKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVV  258 (496)
T ss_pred             CcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhh
Confidence            889999987653      2367889999999999999999999999999999999999999999998877655554433 


Q ss_pred             ---CC----CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--h
Q 014769          239 ---GS----IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--E  309 (419)
Q Consensus       239 ---~~----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~  309 (419)
                         +.    .++++++.||||.|++||+|+||++++++       .+.+.++.... .+.++.+.|.++..+|+...  .
T Consensus       259 ~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~-------~l~~~~~~~~~-~~~vs~~~Q~a~~~~L~d~~~~~  330 (496)
T PLN02376        259 NDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND-------SVVSCARKMSS-FGLVSSQTQLMLASMLSDDQFVD  330 (496)
T ss_pred             ccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCChhHHH
Confidence               11    13567899999999999999999998652       35555544333 34578899999999998643  3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc--cCCCCHHHHHHHHHHhcCeEeecCCCCCC-
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL--EDINDDIEFALKLAKEESVIVTPGIYVGL-  386 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-  386 (419)
                      .++.+.+++++++++.+.+.|++. ++. +..|.+|+|+|++++....  ....+..+++..++++.||.+.||+.|+. 
T Consensus       331 ~~l~~~r~~l~~r~~~l~~~L~~~-gi~-~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~  408 (496)
T PLN02376        331 NFLMESSRRLGIRHKVFTTGIKKA-DIA-CLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT  408 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC
Confidence            556677889999999999999886 777 4478999999999975211  11112357888888888999999999964 


Q ss_pred             -CCeEEEEee-cCHHHHHHHHHHHHHHHHHHh
Q 014769          387 -KNWLRIAFC-AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       387 -~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~  416 (419)
                       ++||||+++ .+++++++++++|++++.+..
T Consensus       409 ~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~  440 (496)
T PLN02376        409 EPGWFRICFANMDDDTLHVALGRIQDFVSKNK  440 (496)
T ss_pred             CCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence             689999997 588999999999999997554

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=3.4e-49  Score=378.05  Aligned_cols=356  Identities=23%  Similarity=0.376  Sum_probs=306.5

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--C-CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--K-FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~-~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      +..++|+.|.|..  ...+...+.+++.+.++..  . ...|.++.|..+||+.|++++...+|+.+++++|++|+|+++
T Consensus        89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~  166 (459)
T COG1167          89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ  166 (459)
T ss_pred             CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence            8899999998653  3445677777777776432  2 468898899999999999999988999999999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC--CCccccC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP--GNPCGNV  196 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p--~nptG~~  196 (419)
                      |++.+++.+++|||+|++++|+|++...+++..|.++..++++.   .++|+|+|++.+......+++++|  +||||.+
T Consensus       167 al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~---~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~t  243 (459)
T COG1167         167 ALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDE---DGIDPEALEEALAQWKPKAVYVTPTFQNPTGVT  243 (459)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC---CCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999863   368999999998864344444555  8999999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      +|.++.++|+++|+++|++||+||+|+.+.|++.+.+++..++..++||+++||||. .+||+|+||++++.        
T Consensus       244 ms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~--------  314 (459)
T COG1167         244 MSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP--------  314 (459)
T ss_pred             cCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH--------
Confidence            999999999999999999999999999999998887788888888899999999999 69999999999986        


Q ss_pred             hHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCCCCceEEEEeecC
Q 014769          277 GIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEI-PCISCPNKPEGSMVTMVKLN  353 (419)
Q Consensus       277 ~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~p~~g~~~~~~~~  353 (419)
                      ++++.+.... ..+.+++.+.|.+++..+.++. ..++.+++..++++++.+.+.|++. |+...+..|.+|+|+|++++
T Consensus       315 ~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~  394 (459)
T COG1167         315 ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELP  394 (459)
T ss_pred             HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcC
Confidence            6788888775 3467889999999999998654 7889999999999999999999984 43444778999999999998


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeec-CCCCCC----CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTP-GIYVGL----KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~~----~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      ..     .+..+++..+ .++||.+.| |..|..    .+++|++++ .+++++++++.+|.+++++...
T Consensus       395 ~~-----~~~~~l~~~a-~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~  458 (459)
T COG1167         395 EG-----IDARELLAAA-LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA  458 (459)
T ss_pred             CC-----CCHHHHHHHH-HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            64     2567777766 556999999 888865    348999995 6799999999999999988653

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=5.7e-49  Score=368.15  Aligned_cols=341  Identities=24%  Similarity=0.376  Sum_probs=288.7

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHH
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEV  122 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~  122 (419)
                      +++|+.|+|.    +++++.+.+++.+...  ....|+++.|..+||+++++|+.+.+|+.++++ +|++|+|+++++..
T Consensus         2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~   75 (350)
T TIGR03537         2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH   75 (350)
T ss_pred             eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence            6899999864    5667889999888764  355799999999999999999999889889998 99999999999999


Q ss_pred             HHHHhcCCC---CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          123 ILSVLARPG---ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       123 ~~~~l~~~g---d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ++.+++++|   |+|+++.|+|..+...++..|.+++.+++++++++.+|++.++.++.++++++++++|+||||.+++.
T Consensus        76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~  155 (350)
T TIGR03537        76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR  155 (350)
T ss_pred             HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence            999999887   69999999999999999999999999998766678899999999988889999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|+++|+++|+++|+||+|..+.+++ ...++..++ .+++++++||||.++++|+|+||++++.        ++.
T Consensus       156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~~  225 (350)
T TIGR03537       156 SYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KLI  225 (350)
T ss_pred             HHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HHH
Confidence            999999999999999999999999877654 233333333 3589999999999999999999998754        577


Q ss_pred             HHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          280 DSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       280 ~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      +.++.... ...+.+...|.++...+..  ..++++.+.+++++++.+.+.|++. ++. +..|++|+|+|++++..   
T Consensus       226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~~~~~~~---  298 (350)
T TIGR03537       226 SFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLWVKVPSG---  298 (350)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEEEECCCC---
Confidence            77776543 2334455677777777764  5678888899999999999999887 776 55888999999999752   


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                        .++.+++..|+ ++||.|.||..|+.  ++++||+++.+++++++++++|++
T Consensus       299 --~~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       299 --IDAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER  349 (350)
T ss_pred             --CCHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence              24677887775 47999999999865  589999998788999999999875

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=1.6e-48  Score=370.92  Aligned_cols=356  Identities=21%  Similarity=0.343  Sum_probs=295.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~  118 (419)
                      .+.++++|+.|+|..    +.++.+.+++.+.+.......|+++.|.+++|+++++|+.+.+|..++++ +|++|+|+++
T Consensus        27 ~~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~  102 (395)
T PRK08175         27 RGEDIIDFSMGNPDG----PTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE  102 (395)
T ss_pred             cCCCeEEcCCCCCCC----CCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence            478899999998753    34566777777776555556899999999999999999998889888887 8999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---CCccEEEEeCCCCcccc
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---KNTAAMVIINPGNPCGN  195 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~  195 (419)
                      ++..++..++++||+|++++|+|+.+...++..|.++..+++++++.   ..+.++++++   ++++++++++|+||||.
T Consensus       103 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~  179 (395)
T PRK08175        103 GLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQ  179 (395)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCC
Confidence            99999999999999999999999999888899999999998865433   3677777665   36788999999999999


Q ss_pred             CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769          196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ  274 (419)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  274 (419)
                      +++.+++++|+++|+++|+++|+||+|..+.+++...+++..+.. .+.+++++||||.|++||+|+||+++++      
T Consensus       180 ~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~------  253 (395)
T PRK08175        180 CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP------  253 (395)
T ss_pred             CCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH------
Confidence            999999999999999999999999999998887654445444432 3467899999999999999999999854      


Q ss_pred             hhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769          275 KSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN  353 (419)
Q Consensus       275 ~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~  353 (419)
                        ++++.+...... ..+++.+.|.++..++.. ...++++.+..++++++.+.+.|+.+ ++. +..|++|+|+|++++
T Consensus       254 --~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~i~l~  328 (395)
T PRK08175        254 --ELVSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVWAKIP  328 (395)
T ss_pred             --HHHHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEEEECC
Confidence              688877766542 456677788888888864 35678888999999999999999988 676 557889999999997


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ....  ..++.+++.++++++||.|.||..|+.  ++++||+++.+++++.+++++|.+++++.
T Consensus       329 ~~~~--~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~  390 (395)
T PRK08175        329 EPYA--AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD  390 (395)
T ss_pred             cccC--CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence            5310  013678888888889999999998865  46999999888999999999999998753

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9e-49  Score=374.46  Aligned_cols=382  Identities=18%  Similarity=0.282  Sum_probs=291.6

Q ss_pred             hCCchhHHHHHHHHHHhhhcCCCC-------CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 014769           19 AAPAVTVKTSLASIIDSVNKNDPR-------PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARR   91 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~   91 (419)
                      -+......+|.+++...+.++++.       ++|+|+.|.|.    +++++.+.+++ +.+..   ..|+++.|.+++|+
T Consensus        70 ~~g~~~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lre  141 (527)
T PRK09275         70 LGGMPQKEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTE  141 (527)
T ss_pred             cCCCcccccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHH
Confidence            445555666777777777776554       37999999964    66778887744 55432   25999999999999


Q ss_pred             HHHHHHHh-hCCCCC-C--CCcEEEcccHHHHHHHHHHH-----hcCCCCeEEeeCCCCCCcHHHHhhcCCE--EEEEec
Q 014769           92 AIADYLSR-DLPYKL-S--ADDVYVTLGCKQAVEVILSV-----LARPGANVLLPRPGWPYYEGIAQRKQVE--VRHFDL  160 (419)
Q Consensus        92 ~ia~~l~~-~~~~~~-~--~~~i~~t~g~~~al~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~g~~--~~~~~~  160 (419)
                      +|++++.+ ..+... .  .++|++|+|+++++..++.+     +++|||+|++++|+|+.|...+...|..  ++.++.
T Consensus       142 aia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~  221 (527)
T PRK09275        142 KIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINA  221 (527)
T ss_pred             HHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeec
Confidence            99995544 333222 2  34899999999999999986     6889999999999999999888877654  455555


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCcccc
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                      +++++|.+|++.++++++++++++++++|+||||.+++.+++++|+++|++  ++++||+||+|..+.+.   +.++...
T Consensus       222 ~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~  298 (527)
T PRK09275        222 DEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV  298 (527)
T ss_pred             CcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh
Confidence            556679999999999988899999999999999999999999999999964  59999999999997642   2233222


Q ss_pred             CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch-----------------------h---hHHHHH----Hhhh-c
Q 014769          239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK-----------------------S---GIIDSI----KDCL-S  287 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~-----------------------~---~~~~~l----~~~~-~  287 (419)
                       ..+++|++.||||.|+++|+|+||++++++. +++.                       |   .+++++    +... +
T Consensus       299 -~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~-v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~  376 (527)
T PRK09275        299 -LPYNTILVYSFSKYFGATGWRLGVIALHEDN-VFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALN  376 (527)
T ss_pred             -CCCCEEEEeehhhhccCcHhHHhhhhcCchh-HHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHh
Confidence             2257999999999999999999999987631 1100                       0   112222    2332 3


Q ss_pred             cccCCchHHHHH-----HHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc----
Q 014769          288 IYSDIPTFIQGA-----IPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE----  358 (419)
Q Consensus       288 ~~~~~~~~~~~a-----~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~----  358 (419)
                      .+.+.+.+.|.+     +.++++. ...+++++++.++++++.+.+.|. + .+. ...|.+++|+|++++.....    
T Consensus       377 ~t~~~s~p~Q~a~al~~~~all~~-~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~-~~~p~g~fY~~~di~~~~~~~~g~  452 (527)
T PRK09275        377 HTAGLSTPQQVQMALFSLFALLDE-EDAYKKAMKDIIRRRYKALYEGLG-L-PEP-EDPNNAAYYTLIDLEEWAEKNYGK  452 (527)
T ss_pred             hccCCCCHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHHHcC-C-CCc-CCCCCeeEEEEEEhHHhhhhccCc
Confidence            456778888886     3344553 357889999999999999988873 2 222 23789999999998642100    


Q ss_pred             -------CCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769          359 -------DINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       359 -------~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                             ...++.+++.+|++++||.+.||+.|+. .+++|+|++ .+++++.+++++|.+++.++..
T Consensus       453 ~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~  520 (527)
T PRK09275        453 EFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE  520 (527)
T ss_pred             hhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence                   0125788999999999999999999985 578999997 6889999999999999988754

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=6.6e-48  Score=367.31  Aligned_cols=344  Identities=20%  Similarity=0.238  Sum_probs=277.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      .+.++|+|+.|+|.    +++++.+.+++.+.+.+.    ....|.++.|.++||+++++++.+.   .+++++|++|+|
T Consensus        31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~G  103 (402)
T TIGR03542        31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDG  103 (402)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCC
Confidence            47889999999864    466788888888877642    2357988899999999999986432   478999999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCC-----------EEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          116 CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQV-----------EVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       116 ~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      +++++..++ .+..+||+|++++|+|..+...++..|.           +++.+++++++++.++++.     ..+++++
T Consensus       104 a~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i  177 (402)
T TIGR03542       104 AKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDII  177 (402)
T ss_pred             cHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEE
Confidence            999999875 4557999999999999999999999999           8888887655556555432     1467899


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      ++++||||||.+++.+++++|+++|++++++||+||+|..+.+++..+.++..++. .+++|+++||||.|++||+|+||
T Consensus       178 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~  257 (402)
T TIGR03542       178 YLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW  257 (402)
T ss_pred             EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence            99999999999999999999999999999999999999998876543344444443 35789999999999999999999


Q ss_pred             EEeeCCCCccchhhHH--------HHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          264 LVTNDPNGIFQKSGII--------DSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~--------~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                      ++++.        +++        ..+.... ....+++.+.|.++..++......+..+.+..++++++.+.+.|++. 
T Consensus       258 ~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-  328 (402)
T TIGR03542       258 TVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-  328 (402)
T ss_pred             EEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            99965        233        2222211 22345788899998888876444566777788999999999999887 


Q ss_pred             CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                      ++. +..|.+|+|+|++++..     .++.+++..+++++||.+.||+.|+.  .+|+||+++.+++++++++++|+++
T Consensus       329 ~~~-~~~~~~~~f~~v~l~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~  401 (402)
T TIGR03542       329 GFK-VYGGEHAPYLWVKTPEG-----ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA  401 (402)
T ss_pred             Cce-ecCCCceeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence            666 54678999999999742     25678888988888999999998865  5899999877899999999999875

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-46  Score=357.85  Aligned_cols=353  Identities=22%  Similarity=0.405  Sum_probs=289.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ...++++|+.|+|.    +++++.+.+++.+.+...  ....|++..|++++|+++++++.+.++.++++++|++|+|++
T Consensus        31 ~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~  106 (394)
T PRK06836         31 GADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA  106 (394)
T ss_pred             CCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChH
Confidence            35678999999864    456788999888877543  245798889999999999999998888889999999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      +++..++.+++.+||.|++++|+|..+...++..|.+++.++++++ ++++|++.++++++++++++++++|+||||.++
T Consensus       107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~  185 (394)
T PRK06836        107 GALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSPNNPTGVVY  185 (394)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCC
Confidence            9999999999999999999999999999999999999999998653 468999999999988899999999999999999


Q ss_pred             CHHHHHHHHHHHHh------CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          198 TYHHLQEIAEMARK------LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       198 ~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      |.+++++|+++|++      ||+++|+||+|.++.+++....++..  ..+++++++||||.|++||+|+||++++++. 
T Consensus       186 ~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~-  262 (394)
T PRK06836        186 SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSKSLSLPGERIGYIAVNPEM-  262 (394)
T ss_pred             CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchhhccCcceeeEEEecCHHH-
Confidence            99999999999999      89999999999999887544333222  2357999999999999999999999986521 


Q ss_pred             ccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 014769          272 IFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTM  349 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~  349 (419)
                       .....++..+......  ...++.+.|.++..++.+.      ..+..++++++.+.+.|+++ ++. +..|.+|+|+|
T Consensus       263 -~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~  333 (394)
T PRK06836        263 -EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTEL-GFE-CVKPQGAFYLF  333 (394)
T ss_pred             -hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHhC-CCE-eecCCceEEEE
Confidence             1000112222211111  2356778899998888752      12456788889999999887 776 55888999999


Q ss_pred             eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          350 VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++++..      +..+++..+ .++||.+.||..|+..+++||+++.+++++++++++|++++++|.
T Consensus       334 ~~~~~~------~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~~  393 (394)
T PRK06836        334 PKSPEE------DDVAFCEKA-KKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKEYK  393 (394)
T ss_pred             EeCCCC------CHHHHHHHH-HhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence            988641      467777554 778999999999988899999999899999999999999999875

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=5.8e-48  Score=367.21  Aligned_cols=369  Identities=20%  Similarity=0.202  Sum_probs=281.8

Q ss_pred             hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCC-CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769           19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTA-FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL   97 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l   97 (419)
                      ..+...+..+...+..    ...+++|||+.|.|.. ...+|..+.+.+++.+.++......|+++.|.+++|++|++|+
T Consensus         7 ~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~   82 (396)
T PRK09257          7 AAPADPILGLMEAFRA----DPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELL   82 (396)
T ss_pred             CCCCChHHHHHHHHhh----CCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHh
Confidence            4445566665543322    2245789999997531 1122334788888888776555558999999999999999999


Q ss_pred             HhhCCCCCCCCcE--EEcccHHHHHHHHHHHh--cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           98 SRDLPYKLSADDV--YVTLGCKQAVEVILSVL--ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        98 ~~~~~~~~~~~~i--~~t~g~~~al~~~~~~l--~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      .+..+..+++++|  ++|+|+++++..+++++  +++||+|++++|+|+.+...++..|.+++.+++...+++++|++.+
T Consensus        83 ~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l  162 (396)
T PRK09257         83 FGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAM  162 (396)
T ss_pred             cCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHH
Confidence            7765555688887  99999999999998776  4799999999999999999999999999999874344578999999


Q ss_pred             HHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC-CCCCCccccC-CCCcEEEEe
Q 014769          174 EALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFG-SIVPVITLG  248 (419)
Q Consensus       174 ~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~~~i~~~  248 (419)
                      ++++..   ++.++++++||||||.++|.+++++|+++|+++++++|+||+|..+.++. ....++..+. ..+++|+++
T Consensus       163 ~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~  242 (396)
T PRK09257        163 LADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVAS  242 (396)
T ss_pred             HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEE
Confidence            988752   34455668999999999999999999999999999999999999988752 2223333332 235799999


Q ss_pred             cCCCcCCCCCceeEEEEeeC-CCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHHHHHHHHH
Q 014769          249 SISKRWLVPGWRFGWLVTND-PNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDTLRE  321 (419)
Q Consensus       249 s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~  321 (419)
                      ||||.|+++|+|+||+++.. +....  ..++..++... ....+++.+.|.++.+++....     .++++++++++++
T Consensus       243 SfSK~~~~~GlRiG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~  320 (396)
T PRK09257        243 SFSKNFGLYGERVGALSVVAEDAEEA--DRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKA  320 (396)
T ss_pred             EcCCcCccccccceeEEEEeCCHHHH--HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999998999999998522 11000  02334443332 2344568888999999997642     3567788999999


Q ss_pred             HHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-cC
Q 014769          322 SAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-AE  397 (419)
Q Consensus       322 ~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-~~  397 (419)
                      +++.+.+.|+++.   ++. +..|++|+|+|++++          .+++.++++++||.+.|.      +  ||+++ .+
T Consensus       321 rr~~l~~~L~~~~~~~~~~-~~~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~  381 (396)
T PRK09257        321 MRQLLVEALKAKGPSRDFD-FIARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGS------G--RINVAGLN  381 (396)
T ss_pred             HHHHHHHHHHhcCCCCCcc-cccccceEEEecCCC----------HHHHHHHHHcCCEEEcCC------C--eEEEeeCC
Confidence            9999999999862   355 458999999999874          246678889999999873      1  99996 79


Q ss_pred             HHHHHHHHHHHHHHH
Q 014769          398 PSALKDGLGRMKAFC  412 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~  412 (419)
                      ++++++++++|++++
T Consensus       382 ~~~i~~~~~~i~~~~  396 (396)
T PRK09257        382 ESNIDYVAEAIAAVL  396 (396)
T ss_pred             HHHHHHHHHHHHhhC
Confidence            999999999998753

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=2.1e-47  Score=367.16  Aligned_cols=339  Identities=15%  Similarity=0.204  Sum_probs=280.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +..+++|+.|.|.    .+++|.+.+++.+....  ...|+++.|..+||+++++++.+..+   .+++|++|+|+++++
T Consensus        84 ~~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al  154 (431)
T PRK15481         84 GTPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAI  154 (431)
T ss_pred             cchhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHH
Confidence            3467899999864    34455677777765543  34799999999999999999865322   356999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEe-CCCCccccCCCH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~  199 (419)
                      ..+++++++|||.|++++|+|+.+...++..|.+++.++++.+   ++|++.+++++++++++++++ +||||||.+++.
T Consensus       155 ~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~  231 (431)
T PRK15481        155 ERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA  231 (431)
T ss_pred             HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence            9999999999999999999999999999999999999988532   489999999887788888887 999999999999


Q ss_pred             HHHHHHHHHHHhC-CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKL-RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++++|+++|+++ +++||+||+|.++.+.+. ...+ .. ..+++++++||||.|+ ||+|+||++++.        ++
T Consensus       232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~-~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~  299 (431)
T PRK15481        232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVI-PQ-TTQRWALIRSVSKALG-PDLRLAFVASDS--------AT  299 (431)
T ss_pred             HHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCC-cC-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HH
Confidence            9999999999999 999999999999876432 2222 22 2358999999999998 999999999865        57


Q ss_pred             HHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      ++.+..... ...+++.++|.++..+|++.. .+++++.++.++++++.+.+.|++. ++. +..|++|+|+|++++.  
T Consensus       300 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~~~l~~--  375 (431)
T PRK15481        300 SARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLWLPLDT--  375 (431)
T ss_pred             HHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEEEECCC--
Confidence            777765433 235678999999999998754 4678889999999999999999987 776 4479999999999973  


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee-cCHHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC-AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~-~~~~~l~~~l~~l~~~~~  413 (419)
                           ++.+++..+ .++||.+.||..|+.   .+++||+++ .+++++++++++|++++.
T Consensus       376 -----~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        376 -----DSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN  430 (431)
T ss_pred             -----CHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence                 356777776 568999999999864   368999997 578999999999999874

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=6.5e-47  Score=361.24  Aligned_cols=383  Identities=16%  Similarity=0.274  Sum_probs=287.3

Q ss_pred             hCCchhHHHHHHHHHHhhhcCCCC-------CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 014769           19 AAPAVTVKTSLASIIDSVNKNDPR-------PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARR   91 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~   91 (419)
                      -+......+|.+++...+.++.+.       ++|+|+.|+|.    +++++.+ .++.+.+.. .  +|+++.|..++++
T Consensus        64 ~~g~~~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~~-~~~~~~~~~-~--~Y~~p~g~~~~~e  135 (521)
T TIGR03801        64 LGGMPQKEGIEERFETFLAENKSQPGAEFLRDIISYVIDQLG----FDPDAFL-YEMCDGIIG-D--NYPVPDRMLPHSE  135 (521)
T ss_pred             cCCCcCcchHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHH-HHHHHHhhc-C--CCCCCCCCHHHHH
Confidence            445556667777777777666443       47999999975    5544444 555555432 2  5887788888888


Q ss_pred             HHH-HHHHhhCCCC-CCCC--cEEEcccHHHHHHHHHHH-----hcCCCCeEEeeCCCCCCcHHHHhhc--CCEEEEEec
Q 014769           92 AIA-DYLSRDLPYK-LSAD--DVYVTLGCKQAVEVILSV-----LARPGANVLLPRPGWPYYEGIAQRK--QVEVRHFDL  160 (419)
Q Consensus        92 ~ia-~~l~~~~~~~-~~~~--~i~~t~g~~~al~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~--g~~~~~~~~  160 (419)
                      +++ +|+.+.++.. ..++  +|++|+|+++++..++.+     +++|||+|++++|+|+.|...+...  |..++.++.
T Consensus       136 ~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~  215 (521)
T TIGR03801       136 KIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKA  215 (521)
T ss_pred             HHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeec
Confidence            888 5666654433 3333  899999999999999987     6889999999999999999887765  566777776


Q ss_pred             cCCCC-----cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCCCCCC
Q 014769          161 LPERN-----WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYT  233 (419)
Q Consensus       161 ~~~~~-----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~  233 (419)
                      ++.++     |.+|.++++++++++++++++++|+||||.+++.+++++|+++|+++  +++||+||+|..+.+.   +.
T Consensus       216 ~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~  292 (521)
T TIGR03801       216 DEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FR  292 (521)
T ss_pred             ccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---cc
Confidence            54433     89999999998888899999999999999999999999999999986  8999999999987752   23


Q ss_pred             CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch------hhHHHHH------------------------H
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK------SGIIDSI------------------------K  283 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~------~~~~~~l------------------------~  283 (419)
                      ++... ..+++|++.||||.|+++|+|+||+++++.. +++.      ++..+.+                        +
T Consensus       293 sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~-v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr  370 (521)
T TIGR03801       293 SLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDN-IFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSR  370 (521)
T ss_pred             chhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchH-HHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHH
Confidence            33232 2247999999999999999999999987531 1100      0111111                        2


Q ss_pred             hhh-ccccCCchHHHH-----HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          284 DCL-SIYSDIPTFIQG-----AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       284 ~~~-~~~~~~~~~~~~-----a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      ... +++.+.+.+.|.     ++.++++. ...+++++++.++++++.+.+.| .+ .+. ..+|.+++|+|++++....
T Consensus       371 ~v~~~~~~g~s~p~Q~q~al~a~~all~~-~~~y~~~~~~~~~~R~~~l~~~L-g~-~~~-~~~~~g~~Y~~~di~~~~~  446 (521)
T TIGR03801       371 QVALNHTAGLSTPQQVQMALFSLFALMDK-ENAYKAETKDICRRREKLLFRGL-GL-PLQ-EDPNDVAYYTLIDLEEWAE  446 (521)
T ss_pred             HHHHhccCCCCcHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhc-CC-CCc-CCCCCeEEEEEeehHHHHH
Confidence            222 334566777776     34455554 35789999999999999999988 22 222 2368899999999974211


Q ss_pred             c-----------CCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhcc
Q 014769          358 E-----------DINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       358 ~-----------~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      .           ...++.+++.+|++++||.+.||..|+. .+++|+|++ .+++++.++.++|++++.+|..+
T Consensus       447 ~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~~  520 (521)
T TIGR03801       447 KNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYEA  520 (521)
T ss_pred             HhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            0           0125689999999999999999999986 468999997 68999999999999999988654

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.4e-47  Score=363.40  Aligned_cols=370  Identities=16%  Similarity=0.179  Sum_probs=277.4

Q ss_pred             hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769           19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL   97 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l   97 (419)
                      ..+...+..+.+...    +..++++|||+.|.|. ..+...+.+.+.+++.+.+......+|+++.|.+++|+++++|+
T Consensus        10 ~~~~~~~~~~~~~~~----~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~   85 (404)
T PTZ00376         10 LGPPDPILGLAAAFK----ADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLL   85 (404)
T ss_pred             cCCCChHHHHHHHHh----hcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHh
Confidence            344455666555332    2235688999999863 22222223445555444333344568999999999999999999


Q ss_pred             HhhCCCCCCCCcEE--EcccHHHHHHHHHH---HhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           98 SRDLPYKLSADDVY--VTLGCKQAVEVILS---VLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        98 ~~~~~~~~~~~~i~--~t~g~~~al~~~~~---~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      .+..+..+++++|+  .|.|+++++..++.   +++++||+|++++|+|+.|...++..|.+++.+++.+++++++|++.
T Consensus        86 ~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~  165 (404)
T PTZ00376         86 FGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDG  165 (404)
T ss_pred             cCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHH
Confidence            76655567889998  59999999988875   66789999999999999999999999999999998555568999999


Q ss_pred             HHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CCCCccccCC-CCcEEE
Q 014769          173 VEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLFGS-IVPVIT  246 (419)
Q Consensus       173 l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~-~~~~i~  246 (419)
                      ++++++   ++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++.  ...++..+.. .+++++
T Consensus       166 l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~  245 (404)
T PTZ00376        166 MLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLV  245 (404)
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEE
Confidence            998885   3356667799999999999999999999999999999999999999988641  1222222222 247999


Q ss_pred             EecCCCcCCCCCceeEEEEee-CCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc--h---HHHHHHHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLVTN-DPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK--E---DFFCKLIDTL  319 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~--~---~~~~~~~~~~  319 (419)
                      ++||||.|+++|+|+||+++. .+..+.  ..+.+.+.... ....+++.++|.++..++++..  .   +++++.++++
T Consensus       246 i~SfSK~~~~~GlRvG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~  323 (404)
T PTZ00376        246 AQSFSKNMGLYGERIGALHIVCANKEEA--ANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRI  323 (404)
T ss_pred             EEeCCCcccccccccceEEEEeCCHHHH--HHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998421 111000  01333333322 2234457789999999997632  1   2355667889


Q ss_pred             HHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-
Q 014769          320 RESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-  395 (419)
Q Consensus       320 ~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-  395 (419)
                      +++++.+.+.|+++.   ++. +..|++|+|+|++++          .+++.+|++++||.+.||.        |++++ 
T Consensus       324 ~~~r~~l~~~L~~~~~~~~~~-~~~p~gg~f~~~~~~----------~~~~~~L~~~~~v~v~p~~--------Ris~~~  384 (404)
T PTZ00376        324 QNMRQLLYDELKALGSPGDWE-HIINQIGMFSFTGLT----------KEQVERLIEKYHIYLLDNG--------RISVAG  384 (404)
T ss_pred             HHHHHHHHHHHHhcCCCCccc-ccccCceEEEecCCC----------HHHHHHHHHhCCEeecCCC--------eEEEec
Confidence            999999999998862   234 337899999998763          4678899898899999972        99996 


Q ss_pred             cCHHHHHHHHHHHHHHHH
Q 014769          396 AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       396 ~~~~~l~~~l~~l~~~~~  413 (419)
                      .+++++++++++|++++.
T Consensus       385 ~~~~~~~~~~~~l~~~~~  402 (404)
T PTZ00376        385 LTSKNVDYVAEAIHDVVR  402 (404)
T ss_pred             cCHHhHHHHHHHHHHHHh
Confidence            899999999999998875

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=1.9e-46  Score=353.25  Aligned_cols=331  Identities=22%  Similarity=0.351  Sum_probs=271.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC-CCCCcEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK-LSADDVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~~t~g~~~  118 (419)
                      .+.++++|+.|+|.    .+.++.+++++.+....   .+|+++.|.+++|+++++|+.+.+|.. +++++|++|+|+++
T Consensus        25 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~   97 (364)
T PRK07865         25 HPDGIVDLSVGTPV----DPVPPVIQEALAAAADA---PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKE   97 (364)
T ss_pred             cCCCEEEcCCCCCC----CCCCHHHHHHHHHHHhh---CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHH
Confidence            46779999999864    45567888888765432   479999999999999999999988886 99999999999999


Q ss_pred             HHHHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769          119 AVEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       119 al~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      ++..++..+ +++||.|++++|+|+.+...++..|.++..++         +++.+.   ..+++++++++|+||||.++
T Consensus        98 ~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~~~l~---~~~~~~v~~~~p~NPtG~~~  165 (364)
T PRK07865         98 LVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD---------SLTELG---PQRPALIWLNSPSNPTGRVL  165 (364)
T ss_pred             HHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC---------ChhhCC---cccceEEEEcCCCCCCCccC
Confidence            999998888 78999999999999999999999999887763         122222   24678999999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc---CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ  274 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  274 (419)
                      +.+++++|+++|+++|+++|+||+|..+.+++.....+...   ...+++++++||||.|+++|+|+||+++++      
T Consensus       166 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~------  239 (364)
T PRK07865        166 GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP------  239 (364)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH------
Confidence            99999999999999999999999999988765332222110   123579999999999999999999999864      


Q ss_pred             hhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769          275 KSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN  353 (419)
Q Consensus       275 ~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~  353 (419)
                        ++++.++... .....++.+.|.++..+++.  .+++++.+..++++++.+.+.|++. ++. +..|++|+|+|+.++
T Consensus       240 --~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~  313 (364)
T PRK07865        240 --ALVAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAA-GFR-VDHSEAGLYLWATRG  313 (364)
T ss_pred             --HHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCccEEEEEeCC
Confidence              5777777654 33456788899999888875  5678888899999999999999987 776 557889999999874


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHH
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      .       +..++...+ .++||.+.||..|+.  ++++||+++.+++++++++++|+
T Consensus       314 ~-------~~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~  363 (364)
T PRK07865        314 E-------DCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA  363 (364)
T ss_pred             C-------CHHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence            2       345565555 778999999998863  67999999778999999999885

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=6.5e-48  Score=364.11  Aligned_cols=349  Identities=31%  Similarity=0.525  Sum_probs=295.2

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHH-HHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVD-AVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAV  120 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al  120 (419)
                      ++|||+.|++......++.+++.+++.+ .........|+++.|.+++|+++++++.+..+...+++ +|++++|+.+++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            6899999987643222355666666654 33334566999999999999999999998788888999 999999999999


Q ss_pred             HHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCcc
Q 014769          121 EVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPC  193 (419)
Q Consensus       121 ~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~npt  193 (419)
                      ..++..+ .++||+|+++.|+|+.+...++..|.++..++++.++++.+|++.|++.+++      +++++++++|+|||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt  161 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT  161 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence            9999999 7899999999999999999999999999999987778889999999998887      56789999999999


Q ss_pred             ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc
Q 014769          194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI  272 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  272 (419)
                      |.+++.+++++|+++|+++|+++|+||+|+.+.++...+.+ ...+....++++++|+||.|+++|+|+||++++.    
T Consensus       162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~----  237 (363)
T PF00155_consen  162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP----  237 (363)
T ss_dssp             TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH----
T ss_pred             ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh----
Confidence            99999999999999999999999999999999987654333 3444555569999999999999999999999965    


Q ss_pred             cchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769          273 FQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV  350 (419)
Q Consensus       273 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  350 (419)
                          ++++.++........ +.+.|.++..++....  .+++++.+++++++++.+.+.|++. ++. +..+.+|+|+|+
T Consensus       238 ----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~  310 (363)
T PF00155_consen  238 ----ELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT-VLPPEAGFFLWV  310 (363)
T ss_dssp             ----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHHSBSSEEEE
T ss_pred             ----hhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh-eeeccCccEEEE
Confidence                688888877653333 7788888888887643  2388999999999999999999888 887 447779999999


Q ss_pred             ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHH
Q 014769          351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRM  408 (419)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l  408 (419)
                      .++..      ++.++..+|++++||.+.||..|+.++++|+++ ..+++++++++++|
T Consensus       311 ~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  311 RLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             EESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             Ecccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence            88752      467899999887799999999999999999999 67999999999986

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PLN02368 alanine transaminase

Probab=100.00  E-value=3.3e-47  Score=358.78  Aligned_cols=333  Identities=23%  Similarity=0.383  Sum_probs=264.7

Q ss_pred             cCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCC----CCC----------------------CChHHHH
Q 014769           12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAF----PCF----------------------RTAVEAE   65 (419)
Q Consensus        12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~----~~~----------------------~~~~~v~   65 (419)
                      .++++..+.+...+..+.. ..+.+ +..+.++|+|++|+|...    ..+                      .+++.+.
T Consensus        10 ~~~~~~~~~~~~~~~~~~~-~a~~~-~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~   87 (407)
T PLN02368         10 SLNENVKKCQYAVRGELYL-RASEL-QKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIA   87 (407)
T ss_pred             hcCHHHHhhhhhcCCHHHH-HHHHH-HHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHH
Confidence            3455555556665555443 33333 234889999999998510    011                      2456666


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCCCeEEeeCCCCCC
Q 014769           66 DAIVDAVR-SGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWPY  143 (419)
Q Consensus        66 ~a~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vlv~~p~~~~  143 (419)
                      +++..... ......|+++.|.++||++|++|+++++|..+++++|++|+|+++++..++.+++ ++||+|++++|+|+.
T Consensus        88 ~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~  167 (407)
T PLN02368         88 RAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPL  167 (407)
T ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCcc
Confidence            66554322 2335689999999999999999999988988999999999999999999999987 799999999999999


Q ss_pred             cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769          144 YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       144 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  217 (419)
                      |...+...|.+++.++++++++|++|++.+++++++      +++++++++||||||.+++.+++++|+++|+++|++||
T Consensus       168 y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II  247 (407)
T PLN02368        168 YSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLL  247 (407)
T ss_pred             HHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence            999999999999999988777799999999998864      57889999999999999999999999999999999999


Q ss_pred             EcccccccccCCC-CCCCccc----cC----CCCcEEEEecCCCcC-CCCCceeEEEEeeC-CCCccchhhHHHHHHhhh
Q 014769          218 ADEVYGHLTFGSI-PYTPMGL----FG----SIVPVITLGSISKRW-LVPGWRFGWLVTND-PNGIFQKSGIIDSIKDCL  286 (419)
Q Consensus       218 ~De~~~~~~~~~~-~~~~~~~----~~----~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~l~~~~  286 (419)
                      +||+|..+.|++. .+.++..    ++    ..+++|+++||||.| +++|+|+||+++.+ +      +++++.+....
T Consensus       248 ~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~------~~li~~~~~~~  321 (407)
T PLN02368        248 GDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP------PKTVEEIYKVA  321 (407)
T ss_pred             EEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC------HHHHHHHHHHh
Confidence            9999999998764 3333322    11    234799999999998 79999999998521 1      15777777764


Q ss_pred             ccccCCchHHHHHHHHHHcccc------hHHH---HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769          287 SIYSDIPTFIQGAIPQILEKTK------EDFF---CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN  353 (419)
Q Consensus       287 ~~~~~~~~~~~~a~~~~l~~~~------~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~  353 (419)
                      ...++++.++|.++..++....      ..+.   +++...++++++.+.+.|++++|+.+ ..|+||+|+|++++
T Consensus       322 ~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~-~~P~Gafy~~~~i~  396 (407)
T PLN02368        322 SIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVC-NFTEGAMYSFPQIK  396 (407)
T ss_pred             cccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEe-CCCCeeeEeccCCC
Confidence            4456788899999999997531      1233   44678999999999999999989884 48999999998765

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.1e-46  Score=350.62  Aligned_cols=349  Identities=20%  Similarity=0.328  Sum_probs=288.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|+|+.|.+.    +++++.+.+++.+.+.......|+++.|..++|+++++++      ++++++|++|+|+++++
T Consensus        27 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al   96 (380)
T PRK06225         27 DKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL   96 (380)
T ss_pred             cCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence            5689999998753    5678999999999887665668998899999999999998      57888999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ..++++++.+||+|++++|+|..+...++..|.+++.++++. ++++.+|++.+++.++++++++++++|+||||.+++.
T Consensus        97 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~  176 (380)
T PRK06225         97 YLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE  176 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence            999999999999999999999988888899999999888743 3457899999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|+++|+++|+++|+||+|..+..+.   .+...+. .++++++.||||.++++|+|+||+++++        +++
T Consensus       177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l~  244 (380)
T PRK06225        177 EEIKEFAEIARDNDAFLLHDCTYRDFAREH---TLAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DLI  244 (380)
T ss_pred             HHHHHHHHHHHHCCcEEEEehhHHHHhccC---CchhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HHH
Confidence            999999999999999999999998765432   1122222 2568999999999989999999999865        577


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.......+.+.++|.++...+... .++.++.++.++++++.+.+.|++++++.+...|.+|+|+|+.++...   
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~---  320 (380)
T PRK06225        245 EVVKSIVINDLGTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG---  320 (380)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc---
Confidence            7776654334567888888888888652 466777777788888888899988767542335677889999886421   


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                       .+..++..+|. ++||.+.||..|+.   ++++|++++.+++++++++++|++++.++++
T Consensus       321 -~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~  379 (380)
T PRK06225        321 -IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT  379 (380)
T ss_pred             -CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence             25677877775 67999999976643   4699999988899999999999999988764

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.1e-46  Score=350.81  Aligned_cols=328  Identities=21%  Similarity=0.316  Sum_probs=273.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|+|+.|.+.    +++++.+.+++.+.+..  ...|++ .|..+||++|++++      ++++++|++|+|+++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al   95 (357)
T PRK14809         29 PDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGAL   95 (357)
T ss_pred             ccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            6789999999753    56677888888887653  457875 68999999999998      68899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++++++++||.|++++|+|..+...+...|..+..++++.++++.++.+.+.+... +++++++++||||||.++|.+
T Consensus        96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-~~k~i~l~~p~NPTG~~~s~~  174 (357)
T PRK14809         96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD-GERIVYLTSPHNPTGSEIPLD  174 (357)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-CCcEEEEeCCCCCCCcCCCHH
Confidence            9999999999999999999999888888889999999998765677888888877653 578999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++|+++|++ +++||+||+|..+.+.+.   .+......+++++++||||.|+++|+|+||+++++        ++++
T Consensus       175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~  242 (357)
T PRK14809        175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD  242 (357)
T ss_pred             HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence            99999999875 789999999999876432   12223344689999999999999999999999875        5777


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .+..... .+..+.++|.++..++..  .+++++.++.++++++.+.+.|...     . .|.+|+|+|++++       
T Consensus       243 ~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~g~f~~~~~~-------  306 (357)
T PRK14809        243 AYARVNT-PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-----T-WESAGNFVLAEVG-------  306 (357)
T ss_pred             HHHHhCC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-----c-CCCCCCEEEEECC-------
Confidence            7776543 456788888888888865  6788888899999999998888642     2 3577899999874       


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                       +..++...+ .++||.|.||..|+.++++||+++. ++++++++++|+++++
T Consensus       307 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        307 -DASAVAEAA-QERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA  356 (357)
T ss_pred             -CHHHHHHHH-HHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence             356777665 6789999999999888999999974 6899999999998874

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=9e-46  Score=354.87  Aligned_cols=372  Identities=19%  Similarity=0.290  Sum_probs=280.7

Q ss_pred             hhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHHHHH
Q 014769           23 VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPARRAIADYLS   98 (419)
Q Consensus        23 ~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~   98 (419)
                      ..+...+.++....   ..+++|+|+.|+|...  .++.+.+.+++.+.+...    ....|+++.|.++||++|++|++
T Consensus        14 ~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   88 (416)
T PRK09440         14 SGITQLMDDLNDGL---RTPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLN   88 (416)
T ss_pred             hcHHHHHHHHHHHh---cCCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHH
Confidence            34555555554433   2367899999998632  123456777777766542    23579999999999999999999


Q ss_pred             hhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-----CCCeEEe-eCCCCCCcHHHHhhcC----CEEEEEeccCCC-Ccc
Q 014769           99 RDLPYKLSADDVYVTLGCKQAVEVILSVLAR-----PGANVLL-PRPGWPYYEGIAQRKQ----VEVRHFDLLPER-NWE  167 (419)
Q Consensus        99 ~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-----~gd~vlv-~~p~~~~~~~~~~~~g----~~~~~~~~~~~~-~~~  167 (419)
                      +.+|.++++++|++|+|+++++..++++++.     +||.|++ ++|+|+.|...+...+    .....+++..+. ++.
T Consensus        89 ~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (416)
T PRK09440         89 ERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYH  168 (416)
T ss_pred             HHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccC
Confidence            9899999999999999999999999999985     6899999 6999999887554333    222233332221 467


Q ss_pred             cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769          168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL  247 (419)
Q Consensus       168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  247 (419)
                      +|++.++  +.++++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.... ....... ...+++|++
T Consensus       169 ~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~-~~~~~vI~~  244 (416)
T PRK09440        169 VDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATP-LWNPNIILC  244 (416)
T ss_pred             CCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCc-cccCCeEEE
Confidence            8999887  35567899999999999999999999999999999999999999997532110 0111111 114689999


Q ss_pred             ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccch-HHHHH-HHHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKE-DFFCK-LIDTLRESAE  324 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~-~~~~~-~~~~~~~~~~  324 (419)
                      +||||. ++||+|+||++++.        ++++.+..... ...+++.+.|.++..+++.... .+..+ .+..++++++
T Consensus       245 ~SfSK~-~~pGlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~  315 (416)
T PRK09440        245 MSLSKL-GLPGVRCGIVIADE--------EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQ  315 (416)
T ss_pred             eccccc-CCCcceEEEEeCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence            999997 99999999999865        57787777653 3456789999999999987431 23333 5677888888


Q ss_pred             HHHHHhhc-CCC--CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---------CCeEEE
Q 014769          325 ICYDGVKE-IPC--ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---------KNWLRI  392 (419)
Q Consensus       325 ~l~~~l~~-~~~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------~~~~Ri  392 (419)
                      .+.+.|.+ +++  +. +..|++|+|+|++++...    .++.++...+ .++||.+.||+.|+.         .+++||
T Consensus       316 ~~~~~L~~~l~~~~~~-~~~p~gg~fiw~~~~~~~----~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRi  389 (416)
T PRK09440        316 LAIALLRRYLPDEPCL-IHKPEGAIFLWLWFKDLP----ITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRM  389 (416)
T ss_pred             HHHHHHHHhcccCCeE-EecCCCceEEEEECCCCC----CCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEE
Confidence            88888876 333  33 347889999999997521    2466777665 678999999998842         258999


Q ss_pred             EeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          393 AFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       393 s~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      +++.+++++++++++|++++++...+
T Consensus       390 s~~~~~~~l~~~i~~l~~~~~~~~~~  415 (416)
T PRK09440        390 NYVQDDEEIEKGIAILAEEVEKAYAE  415 (416)
T ss_pred             EecCCHHHHHHHHHHHHHHHHHHhhc
Confidence            99778999999999999999876543

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=7.5e-46  Score=374.40  Aligned_cols=357  Identities=15%  Similarity=0.257  Sum_probs=288.0

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGC  116 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~  116 (419)
                      ...+.++|+|+.|+|    .+++++.+++++.+.+....   +  ..|+++++++|++++.+++|+..++ ++|++++|+
T Consensus       693 ~~~g~~vI~LsinE~----d~ppPp~V~eAi~eal~~~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs  763 (1082)
T PLN02672        693 GSQESSLIHMDVDES----FLPVPSAVKASIFESFVRQN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTS  763 (1082)
T ss_pred             ccCCCCEEEEeCCCC----CCCCCHHHHHHHHHHHhhcC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCH
Confidence            345789999999985    47789999999988775432   2  3467789999999999989988765 589999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCC-Cccc
Q 014769          117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPG-NPCG  194 (419)
Q Consensus       117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~-nptG  194 (419)
                      ++++..++++++++||.|+++.|+|+.|...++..|.+++.++++++++|.+|++.+++++++ +.+.+++++|+ ||||
T Consensus       764 ~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG  843 (1082)
T PLN02672        764 LALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTG  843 (1082)
T ss_pred             HHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcC
Confidence            999999999999999999999999999999999999999999997667899999999999875 35689999997 9999


Q ss_pred             cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC--CCcc----ccCC---CCcEEEEecCCCcCCCCCceeEEEE
Q 014769          195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY--TPMG----LFGS---IVPVITLGSISKRWLVPGWRFGWLV  265 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~----~~~~---~~~~i~~~s~sK~~~~~G~r~G~~~  265 (419)
                      .+++.+++++|+++|++||++||+||+|+.+.|++...  .++.    .++.   ..++++++||||.|+++|+|+||++
T Consensus       844 ~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylI  923 (1082)
T PLN02672        844 LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLA  923 (1082)
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEE
Confidence            99999999999999999999999999999988875431  1111    1111   2379999999999999999999999


Q ss_pred             eeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHH---c--ccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769          266 TNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL---E--KTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCP  339 (419)
Q Consensus       266 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l---~--~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  339 (419)
                      ++++       ++++.++..... ..+....|.++..++   .  ... .+++.+.++.++++++.+.+.|+++ ++. +
T Consensus       924 ap~~-------eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~-v  993 (1082)
T PLN02672        924 LNDS-------VLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWD-V  993 (1082)
T ss_pred             eCCH-------HHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E
Confidence            8652       377777665332 222333444444433   2  111 3567788888999999999999987 777 5


Q ss_pred             CCCCceEEEEeecCccc-------cc----C-CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHH
Q 014769          340 NKPEGSMVTMVKLNPWL-------LE----D-INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGR  407 (419)
Q Consensus       340 ~~p~~g~~~~~~~~~~~-------~~----~-~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~  407 (419)
                      ..|++|+|+|++++...       ..    + ..++.+++.+|+++.||.+.||..|+.++|+||+++.+++++++++++
T Consensus       994 ~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALer 1073 (1082)
T PLN02672        994 LEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKA 1073 (1082)
T ss_pred             ecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHH
Confidence            58999999999764210       00    0 125788999998888999999998888899999999999999999999


Q ss_pred             HHHHHH
Q 014769          408 MKAFCQ  413 (419)
Q Consensus       408 l~~~~~  413 (419)
                      |+++..
T Consensus      1074 L~kf~~ 1079 (1082)
T PLN02672       1074 IARFKE 1079 (1082)
T ss_pred             HHHHHH
Confidence            998654

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.1e-45  Score=344.74  Aligned_cols=331  Identities=22%  Similarity=0.333  Sum_probs=271.4

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC-CCCCcEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK-LSADDVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~~t~g~~  117 (419)
                      ..+.++++|+.|+|.    .+.++.+.+++.+...   ...|+++.|.++||+++++++.+++|.. +++++|++|+|++
T Consensus        18 ~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~   90 (357)
T TIGR03539        18 SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTK   90 (357)
T ss_pred             hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChH
Confidence            347789999999864    4557788888877653   3479999999999999999999988886 9999999999999


Q ss_pred             HHHHHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769          118 QAVEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV  196 (419)
Q Consensus       118 ~al~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  196 (419)
                      +++..++..+ .++||.|++++|+|+.+...++..|.+++.++         +++.+.   ..+++++++++|+||||.+
T Consensus        91 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~~~~p~NPtG~~  158 (357)
T TIGR03539        91 ELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIWLNSPGNPTGRV  158 (357)
T ss_pred             HHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEEEeCCCCCcCcc
Confidence            9999999888 78999999999999999988898898877653         222222   2468899999999999999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc--c-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL--F-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF  273 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  273 (419)
                      +|.+++++|+++|+++|+++|+||+|..+.+++.....+..  . ....++++++||||.|+++|+|+||+++++     
T Consensus       159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~-----  233 (357)
T TIGR03539       159 LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP-----  233 (357)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH-----
Confidence            99999999999999999999999999988876533222211  0 123478999999999999999999999764     


Q ss_pred             chhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeec
Q 014769          274 QKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL  352 (419)
Q Consensus       274 ~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~  352 (419)
                         ++++.++.... ...+++.+.|.++..+++.  ..++++.+..++++++.+.+.|++. ++. +..|.+|+|+|+++
T Consensus       234 ---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~p~~~~~~~~~~  306 (357)
T TIGR03539       234 ---ALVAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-GFR-IDHSEAGLYLWATR  306 (357)
T ss_pred             ---HHHHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcCCCccEEEEEEC
Confidence               57777766543 2456788899999888865  5667788889999999999999886 776 55889999999987


Q ss_pred             CcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769          353 NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       353 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                      +.       +..++...+ .++||.|.||..|+.  ++++||+++.+++++++++++|
T Consensus       307 ~~-------~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l  356 (357)
T TIGR03539       307 GE-------DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL  356 (357)
T ss_pred             CC-------CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence            52       355666555 778999999998864  5799999988889999999876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.8e-45  Score=344.35  Aligned_cols=334  Identities=18%  Similarity=0.316  Sum_probs=272.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ..++++|+.|.+.    .++++.+.+++.+.+..  ...|+++ +..+||+++++|+      ++++++|++|+|+++++
T Consensus        18 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l   84 (354)
T PRK06358         18 KNMILDFSANINP----LGVPESLKQAITENLDK--LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELI   84 (354)
T ss_pred             ccceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence            3457999998753    34578898998887643  4578764 6899999999998      68999999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..+++++ .+ ++|++++|+|+.+...++..|.+++.++++.++++.+| +++.+.+..+++++++++||||||.+++.+
T Consensus        85 ~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~  161 (354)
T PRK06358         85 FNIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKE  161 (354)
T ss_pred             HHHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHH
Confidence            9999987 33 68999999999999999999999999998766677888 666666666789999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++|+++|+++++++|+||+|..+.+++...+.+..++..+++++++||||.|+++|+|+||++++++       .+++
T Consensus       162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~-------~~~~  234 (354)
T PRK06358        162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK-------NLAE  234 (354)
T ss_pred             HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH-------HHHH
Confidence            999999999999999999999999988764433344445557899999999999999999999998542       4667


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .+..... .++.+.+.|.++..+++.  .+++++.++.++++++.+.+.|++++++. +..|. |.|+|++++       
T Consensus       235 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~~-g~f~~~~~~-------  302 (354)
T PRK06358        235 KLLQMRE-PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKPS-VNFIFFKLE-------  302 (354)
T ss_pred             HHHHhCC-CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCCc-ceEEEEEcC-------
Confidence            7766554 467788899999999965  46778889999999999999999887766 44565 558999886       


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                       +..+++..++ ++||.+.||+.|+.  ++++||+++.+ ++.+++++.|++++
T Consensus       303 -~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~  353 (354)
T PRK06358        303 -KPIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL  353 (354)
T ss_pred             -chHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence             2467877775 57999999999853  57999998764 45567777666553

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3.4e-46  Score=349.85  Aligned_cols=329  Identities=18%  Similarity=0.262  Sum_probs=273.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|+|+.|.+    .+++++.+++++.+.+..  ...|+ ..|..+||++|++++      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~nen----~~~~~~~v~~a~~~~~~~--~~~Yp-~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i   94 (366)
T PRK01533         28 DHSFVKLASNEN----PFGCSPRVLDELQKSWLD--HALYP-DGGATTLRQTIANKL------HVKMEQVLCGSGLDEVI   94 (366)
T ss_pred             CCceEEeCCCCC----CCCCCHHHHHHHHHHHHh--cCcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            568999999985    367888999999887654  23575 469999999999998      67899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++++++++||+|++++|+|+.|...+...|.+++.++++   ++.+|++.++++++++++++++++||||||.+++.+
T Consensus        95 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~  171 (366)
T PRK01533         95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR  171 (366)
T ss_pred             HHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence            99999999999999999999999999999999999999874   346899999999888889999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++|+++|++++ ++|+||+|..+.+.+.....+..+...+++|+++||||.|+++|+|+||++++.        ++++
T Consensus       172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~~~  242 (366)
T PRK01533        172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------ELIE  242 (366)
T ss_pred             HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HHHH
Confidence            9999999998876 677899999887654222223334445689999999999999999999999864        6888


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .++.... .++++.++|.++..+|+.  .++.++.++..+++++.+.+.++.+ ++. + .+..|+|+|++++       
T Consensus       243 ~l~~~~~-~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~~~~nf~~~~~~-------  309 (366)
T PRK01533        243 KLNVVRL-PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQSQTNFIFLPVE-------  309 (366)
T ss_pred             HHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCcCcEEEEeCC-------
Confidence            8877654 467899999999999975  5778888888888888898888887 776 4 3446789999885       


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                       +..++...| .++||.|.+   |  ++++||+++.. ++.+.+++.|+++++..
T Consensus       310 -~~~~~~~~l-~~~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~~  356 (366)
T PRK01533        310 -NGGEIYEAC-AHAGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFENK  356 (366)
T ss_pred             -CHHHHHHHH-HHCCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHhc
Confidence             345676666 568999997   3  57899999874 67788888888887654

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-45  Score=348.26  Aligned_cols=336  Identities=19%  Similarity=0.309  Sum_probs=271.1

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-CCCCCCCCCCHHHHHHHHHHHHhhC--CCCCCCCcEEEcccHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-FNCYATNSGIPPARRAIADYLSRDL--PYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~--~~~~~~~~i~~t~g~~~a  119 (419)
                      ..++|+.|.|    .+++++.+.+++.+.+.... ...|++ .|..+||++|++|+++.+  +..+++++|++|+|++++
T Consensus        29 ~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a  103 (374)
T PRK02610         29 QLDRLDTNEF----PYDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL  103 (374)
T ss_pred             ceeEecCCCC----CCCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence            5899999985    36778999999998776542 357865 699999999999998766  566899999999999999


Q ss_pred             HHHHHHHhcCCCC-eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeCCCCccc
Q 014769          120 VEVILSVLARPGA-NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIINPGNPCG  194 (419)
Q Consensus       120 l~~~~~~l~~~gd-~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG  194 (419)
                      +..++.+++.+|| .|++++|+|..+...++..|.+++.+++++ +++++|+++++.+++    ++++++++++||||||
T Consensus       104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG  182 (374)
T PRK02610        104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG  182 (374)
T ss_pred             HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence            9988888877886 899999999999999999999999998753 358899999998876    3789999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769          195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ  274 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  274 (419)
                      .+++.++++++.++|  +++++|+||+|..+.+.  .  .+..+....++|+++||||.|++||+|+||++++.      
T Consensus       183 ~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~--~--~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~------  250 (374)
T PRK02610        183 NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT--T--LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP------  250 (374)
T ss_pred             CCCCHHHHHHHHhcc--CCcEEEEeccccccCcc--c--hHHHHhcCCCEEEEEecchhccCcccceeeeecCH------
Confidence            999999999999876  38999999999987532  1  12223334578999999999999999999999864      


Q ss_pred             hhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          275 KSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       275 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                        ++++.+..... .++.+.+.|.++..+++.. ..+.+.++.. .+.++.+.+.|+.++++. + .|++|+|+|++++.
T Consensus       251 --~l~~~l~~~~~-~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~-~~~r~~l~~~L~~~~~~~-~-~p~~g~f~~~~l~~  323 (374)
T PRK02610        251 --ELIAVLEKVRL-PYNLPSFSQLAAQLALEHR-QELLAAIPEI-LQERDRLYQALQELPQLR-V-WPSAANFLYLRLSQ  323 (374)
T ss_pred             --HHHHHHHHhcC-CCCCCHHHHHHHHHHhcCH-HHHHHHHHHH-HHHHHHHHHHHHhCCCcE-e-CCCcceEEEEeCCC
Confidence              57787776653 3567888999998888752 3444444444 445777888888877765 4 58889999999974


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .     .++.+++..+ .++||.+.++     .+++||+++. ++++++++++|+++++.+
T Consensus       324 ~-----~~~~~~~~~l-~~~gi~v~~~-----~~~lRls~~~-~~~~~~~l~~l~~~l~~~  372 (374)
T PRK02610        324 D-----AALAALHQAL-KAQGTLVRHT-----GGGLRITIGT-PEENQRTLERLQAALTQL  372 (374)
T ss_pred             C-----CCHHHHHHHH-HHCCEEEEeC-----CCeEEEeCCC-HHHHHHHHHHHHHHHhhc
Confidence            2     2466777665 6789999764     4689999986 457899999999998764

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=9.4e-46  Score=348.17  Aligned_cols=331  Identities=21%  Similarity=0.277  Sum_probs=275.7

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ..++|+|+.|.+.    +++++.+.+++.+.+..  . .|.+..|..++|+++++++      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   94 (359)
T PRK03158         28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI   94 (359)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence            3478999999864    45678899998887753  2 4455579999999999998      57889999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++++++++||.|++++|+|+.+...+...|.++..++++   ++.+|++.+++.++++++++++++|+||||.+++.+
T Consensus        95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~  171 (359)
T PRK03158         95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE  171 (359)
T ss_pred             HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999988899999999999875   357899999988888889999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++.++++.|+ +++++|+||+|..+.+++.....+...+..+++++++||||.|+++|+|+||++++.        ++++
T Consensus       172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~  242 (359)
T PRK03158        172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELIE  242 (359)
T ss_pred             HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHHH
Confidence            9988888774 699999999999988765333333333445689999999999999999999999865        6778


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .+..... .++++.++|.++..+++.  .++.++.++.++++++.+.+.|++. ++. + .|.+|+|+|++++.      
T Consensus       243 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~~g~~i~~~~~~------  310 (359)
T PRK03158        243 KLNIARP-PFNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPSQTNFIFVDTGR------  310 (359)
T ss_pred             HHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCCcCcEEEEECCC------
Confidence            7776654 356799999999999975  5677888888889999999999887 666 4 46668899998752      


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                       ++.++...++ ++||.+.||..|+.++++||+++ ++++++.+++.|+++
T Consensus       311 -~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~  358 (359)
T PRK03158        311 -DANELFEALL-KKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL  358 (359)
T ss_pred             -CHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence             4677887775 57999999999988899999998 467888888888775

>PLN02397 aspartate transaminase

Probab=100.00  E-value=3.8e-45  Score=349.00  Aligned_cols=367  Identities=16%  Similarity=0.181  Sum_probs=265.8

Q ss_pred             hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCC-CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769           19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGD-PTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL   97 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l   97 (419)
                      ..+...|..+.+..    .+..+..+++|+.|+ |...+.....+.+.++....+.......|+++.|.++||+++++|+
T Consensus        29 ~~~~~~i~~~~~~~----~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~  104 (423)
T PLN02397         29 PAPPDPILGVTEAF----LADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLA  104 (423)
T ss_pred             cCCCChHHHHHHHH----hhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHH
Confidence            34445555554432    233467789999996 4422111223456565544444444458999999999999999999


Q ss_pred             HhhCCCCCCCCcE-----EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           98 SRDLPYKLSADDV-----YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        98 ~~~~~~~~~~~~i-----~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      .+..+....+++|     +.++|+.+ +...+..+..|||+|++++|+|+.|...++..|.+++.+++.+.+++++|++.
T Consensus       105 ~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~  183 (423)
T PLN02397        105 YGADSPAIKENRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDG  183 (423)
T ss_pred             cCCCCchhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHH
Confidence            6644333333443     33333332 33444444569999999999999999999999999999987544457899998


Q ss_pred             HHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CCCCccccC-CCCcEEE
Q 014769          173 VEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLFG-SIVPVIT  246 (419)
Q Consensus       173 l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~i~  246 (419)
                      +++.+.   ++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++.  ...++..+. ..+++|+
T Consensus       184 l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~  263 (423)
T PLN02397        184 LLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILV  263 (423)
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEE
Confidence            877664   3567778889999999999999999999999999999999999999998641  222332332 2246999


Q ss_pred             EecCCCcCCCCCceeEEEE--eeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc--hH---HHHHHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLV--TNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK--ED---FFCKLIDT  318 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~--~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~---~~~~~~~~  318 (419)
                      ++||||.|+++|+|+||++  +.+++ ..  ..+.+.+.... ....+++.+.|.++..+|+...  ..   ++++++++
T Consensus       264 ~~SfSK~~~~~G~RvG~~v~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~  340 (423)
T PLN02397        264 AQSYAKNMGLYGERVGALSVVCKSAD-VA--VRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADR  340 (423)
T ss_pred             EEECcccCCCccccceEEEEEeCCHH-HH--HHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999986  32211 00  01233333333 2234567788999988887631  12   36778899


Q ss_pred             HHHHHHHHHHHhhcCCC----CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe
Q 014769          319 LRESAEICYDGVKEIPC----ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF  394 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~----~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~  394 (419)
                      ++++++.+.+.|+++ +    +. +..|++|+|+|++++          .+++.+|++++||.+.++      +  |+++
T Consensus       341 ~~~rr~~l~~~L~~~-~~~~~~~-~~~p~gg~fl~~~l~----------~~~~~~Ll~~~~V~v~~~------~--Ri~~  400 (423)
T PLN02397        341 IISMRQKLYDALEAR-GSPGDWS-HITKQIGMFSFTGLN----------KEQVDRMTKEYHIYMTRD------G--RISM  400 (423)
T ss_pred             HHHHHHHHHHHHHhc-CCCCCCC-cccCCceEEEecCCC----------HHHHHHHHHhCCEEECCC------C--eEEE
Confidence            999999999999987 5    66 347999999999773          358899999999999743      2  9999


Q ss_pred             e-cCHHHHHHHHHHHHHHHH
Q 014769          395 C-AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       395 ~-~~~~~l~~~l~~l~~~~~  413 (419)
                      + .+++++++++++|++++.
T Consensus       401 ~~~~~~~i~~~~~~i~~~~~  420 (423)
T PLN02397        401 AGLSSKNVPYLADAIHAVVT  420 (423)
T ss_pred             eeCCHHHHHHHHHHHHHHHh
Confidence            5 899999999999999975

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=1.4e-44  Score=339.72  Aligned_cols=331  Identities=17%  Similarity=0.253  Sum_probs=263.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      ...++|+|+.|.+.    +++++.+.+++.+.+..  ...|+++ +..+||++||+++      ++++++|++|+|++++
T Consensus        20 ~~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~   86 (360)
T PRK07392         20 PPDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAEL   86 (360)
T ss_pred             CcccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence            35578999999642    56778888888877654  4579875 5689999999998      6789999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc---ccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW---EVDLDAVEALADKNTAAMVIINPGNPCGNV  196 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  196 (419)
                      +..+++++. +||.|++++|+|..+...++..|.+++.+++++++++   ..+++.++... ++++++++++||||||.+
T Consensus        87 i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~  164 (360)
T PRK07392         87 LTWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKL  164 (360)
T ss_pred             HHHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCC
Confidence            999999875 6899999999999999999999999999998765543   34566665543 367889999999999999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      ++.++   |.++++++++ +|+||+|..+.+++.....+..++..+++++++||||.|+++|+|+||++++.        
T Consensus       165 ~~~~~---l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~--------  232 (360)
T PRK07392        165 WSREA---ILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP--------  232 (360)
T ss_pred             cCHHH---HHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH--------
Confidence            99555   5555667775 66799999998765322222234445689999999999999999999999865        


Q ss_pred             hHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          277 GIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       277 ~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      ++++.+..... .++++.++|.++..++++  ..+.+..++.++++++.+.+.|+.++++. + .|.+|+|+|++++.  
T Consensus       233 ~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~fl~~~~~~--  305 (360)
T PRK07392        233 DRLQRWQQWRD-PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPSAANFLLVQSQG--  305 (360)
T ss_pred             HHHHHHHhhCC-CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCCEEEEEcCC--
Confidence            57777765543 467899999999999975  46677777888999999999999887876 4 46789999998863  


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecC--HHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAE--PSALKDGLGRMK  409 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~--~~~l~~~l~~l~  409 (419)
                           ++.++..++++++||.|.||..|+.  ++|+||+++.+  .+++.++++++.
T Consensus       306 -----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~~  357 (360)
T PRK07392        306 -----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAIL  357 (360)
T ss_pred             -----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence                 4678888888888999999999964  57999999764  356666666543

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.8e-44  Score=338.42  Aligned_cols=335  Identities=19%  Similarity=0.300  Sum_probs=269.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      ++.++|+|+.|.+    .+++++.+.+++.+.+..  ...|++ .++.++|++|++++      ++++++|++|+|++++
T Consensus        18 ~~~~~i~l~~~~~----~~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~   84 (356)
T PRK08056         18 SPDQLLDFSANIN----PLGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETES   84 (356)
T ss_pred             ChhhEEEeccccC----CCCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence            3677999999974    367788999999887654  346876 46899999999998      6789999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..+++++ .+|+ +++++|+|..+...++..|.++..+++++++++.+| +++.+.+.++++++++++|+||||.+++.
T Consensus        85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~  161 (356)
T PRK08056         85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPER  161 (356)
T ss_pred             HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCH
Confidence            99999987 5665 788899999999999999999999998766667777 44555566788999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|+++|+++++++|+||+|.++.+++....+.  +...+++++++||||.|+++|+|+||++++++       +++
T Consensus       162 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-------~~~  232 (356)
T PRK08056        162 QLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD-------AAV  232 (356)
T ss_pred             HHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCCH-------HHH
Confidence            999999999999999999999999987755322221  22335789999999999999999999998542       466


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... .++++.+.|.++..+++.  ..+.++.++.++++++.+.+.|++++++. + .|.+|+|+|++++.     
T Consensus       233 ~~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~-----  302 (356)
T PRK08056        233 ARMRRQQM-PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLT-V-WPGRANYLFLRCER-----  302 (356)
T ss_pred             HHHHHhCC-CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCCCCcEEEEEcCC-----
Confidence            66665433 456777888888888864  56778888999999999999998887776 4 35568899998863     


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                        +..+++..|+ ++||.+.+|..|..  .+|+||+++. +++.+.+++.|+++++
T Consensus       303 --~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~  354 (356)
T PRK08056        303 --PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVLT  354 (356)
T ss_pred             --ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHHc
Confidence              3567777775 57999999998843  4799999975 4566677777766543

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.6e-44  Score=339.22  Aligned_cols=333  Identities=20%  Similarity=0.307  Sum_probs=268.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|+|+.|.|.    +.+++.+.+++.+....  ...|+++.| .++|+++++++      ++++++|++|+|+++++
T Consensus        35 ~~~~i~l~~~~~~----~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l  101 (371)
T PRK05166         35 VPRIAKLGSNENP----LGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLI  101 (371)
T ss_pred             CcceEEcCCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            5689999999754    34577888888765432  457999888 59999999998      56889999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++.+++++||.|+++.|+|+.+...++..|.++..+++++  ++++|+++++++++++++++++++|+||||.++|.+
T Consensus       102 ~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~  179 (371)
T PRK05166        102 AVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD  179 (371)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999999999999999988753  467899999999888889999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      ++++|+++|++ ++++|+||+|..+.+++.....+..+. ..+++|+++||||.|+++|+|+||++++++       +++
T Consensus       180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~-------~l~  251 (371)
T PRK05166        180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP-------ELV  251 (371)
T ss_pred             HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH-------HHH
Confidence            99999999875 889999999999886443222222222 234799999999999999999999887542       566


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.+..... .++++.++|.++..++..  .+++++.++.++++++.+.+.|++. ++. + .|.+|+|+|++++.     
T Consensus       252 ~~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~~g~fl~~~~~~-----  320 (371)
T PRK05166        252 GLLDRVRT-PFNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-GYR-I-APSRANFLFFDARR-----  320 (371)
T ss_pred             HHHHHhcc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCCcCCEEEEeCCC-----
Confidence            77765443 456788888888888865  4788888899999999999999987 666 4 56778999998752     


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                        ++.++...++ ++||.+.||..++..+++||+++.+ ++.+.+++.|+.+
T Consensus       321 --~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~~-~~~~~l~~~l~~i  368 (371)
T PRK05166        321 --PASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGSP-EENDHFVAALDKV  368 (371)
T ss_pred             --CHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHH
Confidence              4677887775 4699999998777789999999853 3344444444433

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.5e-44  Score=329.14  Aligned_cols=331  Identities=23%  Similarity=0.362  Sum_probs=280.9

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC-CCCCcEEEcccHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK-LSADDVYVTLGCKQAV  120 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~~t~g~~~al  120 (419)
                      +++++|+.+..    .+++++.+.+++.+.+.  .++.|+++ ...++++++++++      + .++++|++++|+++.|
T Consensus        22 ~~~i~LssNen----P~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~------~~~~~~~V~~gnGsde~i   88 (356)
T COG0079          22 PGIIKLSSNEN----PYGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYY------GVVDPENVLVGNGSDELI   88 (356)
T ss_pred             ccceeecCCCC----CCCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHh------CCCCcceEEEcCChHHHH
Confidence            36899999963    25677888898888776  35689986 7899999999998      4 7889999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++++++.+||+|+++.|+|..|...++..|.+++.++..+   |..|++.+..++++++++|++||||||||..++.+
T Consensus        89 ~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~  165 (356)
T COG0079          89 ELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE  165 (356)
T ss_pred             HHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999999999999999998754   78999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      +++++++.+.+ +.++|+||+|.+|.-  ...  +......++++++.||||.||++|+|+||++++.        ++++
T Consensus       166 ~l~~l~~~~~~-~~~vVvDEAY~eF~~--~~~--~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--------~~i~  232 (356)
T COG0079         166 ELRALLEALPE-GGLVVIDEAYIEFSP--ESS--LELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--------ELIA  232 (356)
T ss_pred             HHHHHHHhCCC-CcEEEEeCchhhcCC--chh--hhhccCCCCEEEEEecHHhhhcchhceeeccCCH--------HHHH
Confidence            99999999988 999999999999764  222  2222244579999999999999999999988865        7999


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .++.... .++.|.+++.++.++++.  .+++++..+++...++++.+.|+.++ +..+ .|+.++|++++++..     
T Consensus       233 ~l~~vr~-p~~v~~~a~~aa~aal~~--~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS~aNFvlv~~~~~-----  302 (356)
T COG0079         233 ALNKVRP-PFNVSSPALAAAIAALRD--ADYLEESVERIREERERLYAALKALG-LFGV-FPSQANFVLVRVPDA-----  302 (356)
T ss_pred             HHHHhcC-CCCCCHHHHHHHHHHccc--HHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCCCCcEEEEECCCc-----
Confidence            9998876 578899999999999987  48999999999999999999999984 4423 688899999998741     


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                       ....+.+.| .++||.++.....+ .++|+||++++.+|. +.+++.|++++..
T Consensus       303 -~~~~l~~~L-~~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~  354 (356)
T COG0079         303 -EAAALAEAL-LKKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG  354 (356)
T ss_pred             -cHHHHHHHH-HHCCEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence             234555555 56799999886532 467999999997766 9999998887754

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=9.4e-44  Score=337.20  Aligned_cols=358  Identities=19%  Similarity=0.233  Sum_probs=266.5

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC---CCcEEEcccHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS---ADDVYVTLGCKQ  118 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~---~~~i~~t~g~~~  118 (419)
                      .+.++.++|..+........+.+.+++.+. ......+|+++.|.++||+++++++.+..+ ...   .++|++|+|+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~   80 (388)
T PRK08637          3 ATKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTH   80 (388)
T ss_pred             ccceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHH
Confidence            355777888543222122334444443332 223456899999999999999999877543 333   368999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeCCCCcc
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIINPGNPC  193 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~npt  193 (419)
                      ++..++.+++++||+|++++|+|+.+...+. ..|.+++.+++..+ ++++|++.++++++    +.+.++++++|||||
T Consensus        81 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPT  159 (388)
T PRK08637         81 GLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPNNPT  159 (388)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCC
Confidence            9999999999999999999999999988754 68999999987422 34689999988876    344556788899999


Q ss_pred             ccCCCHHHHHHHHHHHHh-----CCCeEEEcccccccccCCCCCCCc-ccc-CCCCcE--EEEecCCCcCCCCCceeEEE
Q 014769          194 GNVFTYHHLQEIAEMARK-----LRVMVVADEVYGHLTFGSIPYTPM-GLF-GSIVPV--ITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~-~~~-~~~~~~--i~~~s~sK~~~~~G~r~G~~  264 (419)
                      |.+++.+++++|+++|++     ++++||+||+|.++.|++....++ ..+ +..+++  ++++|+||.|++||+|+||+
T Consensus       160 G~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~  239 (388)
T PRK08637        160 GYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFI  239 (388)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEE
Confidence            999999999999999875     899999999999998876544332 222 233454  55679999999999999999


Q ss_pred             EeeCCCCccchhhHHHHHHhh----h-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcC---CC
Q 014769          265 VTNDPNGIFQKSGIIDSIKDC----L-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEI---PC  335 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~----~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~---~~  335 (419)
                      +++....  .++++++.+...    . ...++++.++|.++..+++... ..++.+.+..++++++.+.+.|+..   ++
T Consensus       240 ~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~  317 (388)
T PRK08637        240 TFGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDA  317 (388)
T ss_pred             EEccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence            9753100  011455555432    1 2234678999999999997632 2345556667888888888888654   24


Q ss_pred             CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-cCHHHHHHHHHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-~~~~~l~~~l~~l~~~~~~  414 (419)
                      +. +..|++|+|+|++++..      ++.+++.++++++||.+.+.    ..+++||+++ .+.+++++++++|.+++++
T Consensus       318 ~~-~~~~~~g~~~~~~l~~~------~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~  386 (388)
T PRK08637        318 WQ-AYPFNSGYFMCLKLKGV------DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKD  386 (388)
T ss_pred             cc-cccccceEEEEecCChH------HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHh
Confidence            55 55788999999998631      46788888878889988742    3678999996 5889999999999999986


Q ss_pred             H
Q 014769          415 H  415 (419)
Q Consensus       415 ~  415 (419)
                      +
T Consensus       387 ~  387 (388)
T PRK08637        387 L  387 (388)
T ss_pred             c
Confidence            5

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.8e-44  Score=337.51  Aligned_cols=327  Identities=19%  Similarity=0.283  Sum_probs=265.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|+|+.|.+.    ++++|.+.+++.+..   ....|++ .+..+||++|++++      ++++++|++|+|+++++
T Consensus        51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i  116 (380)
T PLN03026         51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI  116 (380)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence            5689999999743    456677888775421   2346876 47899999999998      57889999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh-cCCccEEEEeCCCCccccCCCH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ..++.+++++||+|++++|+|..|...++..|.++..++.+  .++.+|++.+++++ .++++++++++|+||||.+++.
T Consensus       117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~  194 (380)
T PLN03026        117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD  194 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999988889999999988874  35789999999988 6688999999999999999998


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++.+|++.+    +++|+||+|..+.+.+..   .......+++++++||||.|+++|+|+||++++.        +++
T Consensus       195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~i  259 (380)
T PLN03026        195 DDLLKILELP----ILVVLDEAYIEFSTQESR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SII  259 (380)
T ss_pred             HHHHHHHhcC----CEEEEECcchhhcCCcch---HHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HHH
Confidence            8888887643    899999999988764321   1223344689999999999999999999999865        678


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.+..... .+..+.++|.++.++|+.  .+++++.+..++++++.+.+.|++++++. + .|.+|+|+|++++..    
T Consensus       260 ~~l~~~~~-~~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~~~~f~~~~~~~~----  330 (380)
T PLN03026        260 EYLWRAKQ-PYNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPSDANFILCRVTSG----  330 (380)
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCCCCeEEEEECCCC----
Confidence            88776654 356788899999998875  57888889999999999999999884444 4 688899999998631    


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                       .++.++...|+ ++||.|.++..++.++++||+++. +++.+.+++.|++
T Consensus       331 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~  378 (380)
T PLN03026        331 -RDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ  378 (380)
T ss_pred             -CCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence             24677877775 789999998776667899999985 4455666666554

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.7e-44  Score=336.42  Aligned_cols=335  Identities=19%  Similarity=0.307  Sum_probs=271.6

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhC--CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS--GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ..|+|+.|.|    .+++++.+++++.+.+..  .....|++ .|.++||++|++|+++.+|.++++++|++|+|+++++
T Consensus        27 ~~i~l~~~~~----~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l  101 (368)
T PRK03317         27 VPVRLNTNEN----PYPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL  101 (368)
T ss_pred             ceeEecCCCC----CCCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence            5699999985    367889999999988753  23567876 5899999999999999889899999999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~  199 (419)
                      ..++++++++||.|+++.|+|..+...+...|.+++.++.  ++++++|++.+++++.. +++++++++|+||||.+++.
T Consensus       102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~  179 (368)
T PRK03317        102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL  179 (368)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999999999988988777664  34678999999998864 67889999999999999998


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|+++|   ++++|+||+|.++.+++.. ......+..+++++++||||.|+++|+|+||++++.        +++
T Consensus       180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~~  247 (368)
T PRK03317        180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AVV  247 (368)
T ss_pred             HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HHH
Confidence            8888887766   6899999999998765532 222222334578999999999999999999999865        688


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... .++.+++.|.++..+++.  .+.+.+..++++++++.+.+.|++. ++. +..|.+++++|..++      
T Consensus       248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~------  316 (368)
T PRK03317        248 DALRLVRL-PYHLSAVTQAAARAALRH--ADELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLFGRFA------  316 (368)
T ss_pred             HHHHhcCC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEEeccC------
Confidence            88876543 467888999999888875  3445566677888899999999887 776 447788888776553      


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                        +..++...+ .++||.+.+.   +.++++||+++. +++++.+++.|++++..
T Consensus       317 --~~~~~~~~l-~~~Gv~v~~~---~~~~~iRi~~~~-~~~~~~~~~~l~~~~~~  364 (368)
T PRK03317        317 --DRHAVWQGL-LDRGVLIRDV---GIPGWLRVTIGT-PEENDAFLAALAEVLAT  364 (368)
T ss_pred             --CHHHHHHHH-HHCCEEEEeC---CCCCeEEEecCC-HHHHHHHHHHHHHHHHH
Confidence              356666666 5679999874   346899999974 56789999998888754

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.1e-44  Score=335.84  Aligned_cols=327  Identities=22%  Similarity=0.309  Sum_probs=269.7

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~a  119 (419)
                      +.++|+|+.|.+    .+++++.+++++.+.+.......|++ .|..++|+++++++      +..+ ++|++|+|++++
T Consensus        25 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~------~~~~~~~I~~t~G~~~~   93 (356)
T PRK04870         25 ATGMVKLDAMEN----PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM------GVPAGADVLLGNGSDEL   93 (356)
T ss_pred             CCCceeCcCCCC----CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh------CcCCCCcEEEcCCHHHH
Confidence            568999999985    36789999999998887655668987 68899999999998      3343 589999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~  198 (419)
                      +..++.+++++||+|++++|+|..+...++..|.+++.++++  .++.+|++.+++++.. +++++++++|+||||.++|
T Consensus        94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~  171 (356)
T PRK04870         94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD  171 (356)
T ss_pred             HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999875  3578999999998864 7899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      .+++++|+++|   ++++|+||+|..+.+..  ..+  .+...+++++++|||| ++++|+|+||++++.        ++
T Consensus       172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~~--~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~  235 (356)
T PRK04870        172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--WLP--RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AW  235 (356)
T ss_pred             HHHHHHHHHHC---CCEEEEECCchhhcCcc--hHH--HHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HH
Confidence            99999999988   67899999999875422  111  2233457999999999 799999999999865        57


Q ss_pred             HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      ++.++.... .++.+.++|.++..++++  .+++++.+++++++++.+.+.|++++++. + .|.+|+|+|++++     
T Consensus       236 i~~~~~~~~-~~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~-----  305 (356)
T PRK04870        236 IAELDKVRP-PYNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPSAANFILVRVP-----  305 (356)
T ss_pred             HHHHHHccC-CCcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC-----
Confidence            777776543 356788889888888875  45688888999999999999999887876 4 5667889999886     


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                         +..++... ++++||.|.||..|+.  .+++||+++. .++.+.+++.|+++
T Consensus       306 ---~~~~~~~~-l~~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~  355 (356)
T PRK04870        306 ---DAAAVFDG-LKTRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA  355 (356)
T ss_pred             ---CHHHHHHH-HHHCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence               34566655 4788999999998853  6899999985 56777777777664

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.5e-43  Score=332.83  Aligned_cols=336  Identities=21%  Similarity=0.259  Sum_probs=277.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .+.++++|+.|.+.    +++++.+.+++.+.+..  ...|++.. ..++|+++++++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~   96 (367)
T PRK02731         30 GIADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEI   96 (367)
T ss_pred             CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence            36789999999754    34567888888887653  45788754 479999999998      5778999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++.+++++||+|++++|+|..+...+...|.+++.+++   +++.+|++.+++.+++++++|++++|+||||.+++.
T Consensus        97 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~  173 (367)
T PRK02731         97 LELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPA  173 (367)
T ss_pred             HHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCH
Confidence            99999999999999999999999888888889999988876   356789999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++.++++.|+ +++++|+||+|..+.+++....++..++..+++++++||||.|+++|+|+||+++++        +++
T Consensus       174 ~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~~  244 (367)
T PRK02731        174 EEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EII  244 (367)
T ss_pred             HHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HHH
Confidence            99999988875 599999999999888755433333333344679999999999999999999999865        577


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.+..... .+..+.++|.++..+++.  .+++++.++.++++++.+.+.|++. ++. + .|.+|+|+|++++..    
T Consensus       245 ~~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~g~~~~i~~~~~----  314 (367)
T PRK02731        245 DALNRVRQ-PFNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPSVGNFILVDFDDG----  314 (367)
T ss_pred             HHHHHccC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCceEEEEECCCC----
Confidence            77776544 345678899999998875  5678888889999999999999988 776 4 356688999998532    


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                       .++.++...| .++||.+.++..|+.++++|+++++ .++++.+++.|+++++
T Consensus       315 -~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~~-~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        315 -KDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIGT-EEENRRFLAALKEFLA  365 (367)
T ss_pred             -CCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecCC-HHHHHHHHHHHHHHHh
Confidence             2567777776 5679999999988767899999984 6788999999988764

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.6e-43  Score=330.00  Aligned_cols=336  Identities=17%  Similarity=0.223  Sum_probs=274.1

Q ss_pred             CCCe-eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           41 PRPV-VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~-i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      |.++ ++|+.|++    .+++++.+.+++.+.+..  ...|+++ +..+||++||+++      ++++++|++|+|++++
T Consensus        30 g~~~~~~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~   96 (369)
T PRK08153         30 GRPFRARIGANES----GFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGL   96 (369)
T ss_pred             CCcceeEecCCCC----CCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHH
Confidence            5554 69999985    467788899998877642  3478876 5899999999998      6788999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~  198 (419)
                      +..++.+++++||.|++++|+|+.+...+...|.+++.++++.+   .+|++.+.+.+. .+++++++++|+||||.++|
T Consensus        97 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~  173 (369)
T PRK08153         97 LGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHP  173 (369)
T ss_pred             HHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999998888889999998887432   578888877653 56889999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      .+++.+++++|++ ++++|+||+|..+.+++. ..++..  ..+++++++||||.|+++|+|+||++++.        ++
T Consensus       174 ~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--------~~  241 (369)
T PRK08153        174 AADIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--------GT  241 (369)
T ss_pred             HHHHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--------HH
Confidence            9999999998874 899999999999877543 223222  23579999999999999999999999865        57


Q ss_pred             HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      ++.+..... .++++.++|.++..+++.  .+++++.++.++++++.+.+.|++. ++. + .|.+++|+|++++..   
T Consensus       242 ~~~l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~-~p~~~~f~~~~~~~~---  312 (369)
T PRK08153        242 IKAFDKVRN-HFGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN-GLT-P-LPSATNFVAIDCGRD---  312 (369)
T ss_pred             HHHHHHhhc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCcCcEEEEECCCC---
Confidence            777776654 357899999999999974  5778888999999999999999877 665 4 578899999987521   


Q ss_pred             CCCCHHHHHHHHHHhcCeEee-cCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769          359 DINDDIEFALKLAKEESVIVT-PGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                       .....++..++ .++||.+. |+.. ..++++||+++ ++++++.+++.|++++...+|
T Consensus       313 -~~~a~~l~~~l-~~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~~  368 (369)
T PRK08153        313 -GAFARAVLDGL-IARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAARK  368 (369)
T ss_pred             -cccHHHHHHHH-HHCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence             11355666666 45799994 6643 23579999998 578999999999999876654

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.1e-43  Score=331.77  Aligned_cols=328  Identities=17%  Similarity=0.283  Sum_probs=266.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ..++|+|+.|.+.    +++++.+.+++.+.+... ...|++. |..+||++||+++      ++++++|++|+|+++++
T Consensus        23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al   90 (353)
T PRK05387         23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL   90 (353)
T ss_pred             ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence            4578999999863    556788999998876543 3578765 6799999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++++++++||.|++++|+|+.+...++..|.++..++++  .++.+|++.+++    .++.+++++||||||.++|.+
T Consensus        91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~  164 (353)
T PRK05387         91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA  164 (353)
T ss_pred             HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999998899999999998874  356789998864    457889999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++|++.++  ++++|+||+|..+.  +....++  ....+++++++||||.|+++|+|+||+++++        ++++
T Consensus       165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~~  230 (353)
T PRK05387        165 EIERILAANP--DSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELIE  230 (353)
T ss_pred             HHHHHHHhCC--CcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHHH
Confidence            9999988654  89999999998753  3222222  2334578999999999999999999999864        5777


Q ss_pred             HHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          281 SIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       281 ~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      .++.....  .++++.+.|.++..++..  .+++++.+++++++++.+.+.|+++ ++. + .|.+++|+|++++.    
T Consensus       231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~----  301 (353)
T PRK05387        231 ALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEAL-GFE-V-LPSKANFVFARHPS----  301 (353)
T ss_pred             HHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCcCcEEEEECCC----
Confidence            77766432  356788899999888875  5678888999999999999999987 776 4 46778899998763    


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                        .+..++...| .++||.+.+.......+++|++++ ++++++++++.|++++.
T Consensus       302 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        302 --HDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA  352 (353)
T ss_pred             --CCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence              2567787777 567999976433334679999998 46899999999998765

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=7.5e-43  Score=327.95  Aligned_cols=324  Identities=18%  Similarity=0.174  Sum_probs=262.0

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      +++|+|+.|.+    .+++++.+.+++.+.+..  ...|+++ +..+||++|++++      ++++++|++|+|+++++.
T Consensus        43 ~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~  109 (370)
T PRK09105         43 EGAVFLNANEC----PLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPLN  109 (370)
T ss_pred             CCcEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence            56899999985    356788999999887653  2468775 4899999999987      678999999999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769          122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      .++.+++++||+|++++|+|+.+...++..|.+++.+++++  ++.+|++.+++. .++++++++++||||||.+++.++
T Consensus       110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~  186 (370)
T PRK09105        110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD  186 (370)
T ss_pred             HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence            99999999999999999999999999999999999988753  467899999876 456889999999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++++.++ +++++|+||+|..+...    ++...+ +..+++++++||||.|+++|+|+||++++.        ++++
T Consensus       187 l~~l~~~~~-~~~~lIvDEaY~~f~~~----~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i~  253 (370)
T PRK09105        187 IEWLLANKP-AGSVLLVDEAYIHFSDA----PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLLA  253 (370)
T ss_pred             HHHHHHhCC-CCcEEEEECchHHhccC----cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHHH
Confidence            999998754 58999999999876421    122222 334679999999999999999999999865        5777


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .++.. . .+.++.+.|.++..++.+  .+++++.+++++++++.+.+.|+++ ++. +..|++++| +++++.      
T Consensus       254 ~l~~~-~-~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~~f~-~~~~~~------  320 (370)
T PRK09105        254 KLARF-G-HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPSQANCF-MVDVKR------  320 (370)
T ss_pred             HHHhc-C-CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCCCCcEE-EEeCCC------
Confidence            77665 2 345777788888888875  5788888999999999999999987 777 546776655 577652      


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                       +..++...|++ +||.+  +..|. .++|+|++++. +++++.+++.|++++
T Consensus       321 -~~~~l~~~L~~-~gI~v--~~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~  368 (370)
T PRK09105        321 -PAKAVADAMAK-QGVFI--GRSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM  368 (370)
T ss_pred             -CHHHHHHHHHH-CCcEE--ecCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence             56788888865 59998  33343 36899999985 567788888877664

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-42  Score=325.15  Aligned_cols=327  Identities=20%  Similarity=0.293  Sum_probs=260.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      .+..++|+.|.|    .+++++.+.+++.+.+.......|++. +..++|+++++++      ++++++|++|+|+++++
T Consensus        21 ~~~~~~l~~~~~----~~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l   89 (351)
T PRK14807         21 IPYKYKMDANET----PFELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEII   89 (351)
T ss_pred             CCceeEccCCCC----CCCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHH
Confidence            345789999986    367788999999888765555678864 5789999999998      67889999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~  199 (419)
                      ..++.+++++||+|++++|+|..+...++..|.+++.++++  .++.+|++.+++++++ +++++++++|+||||.+++.
T Consensus        90 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~  167 (351)
T PRK14807         90 HLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER  167 (351)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999988889999999998875  3467999999998875 78999999999999999996


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++.+++   ++++.++|+||+|..+.  +....++  ....+++++++||||.|++||+|+||++++.        +++
T Consensus       168 ~~l~~l~---~~~~~~~ivDe~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~~  232 (351)
T PRK14807        168 EDIIKII---EKSRGIVVVDEAYFEFY--GNTIVDV--INEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NIL  232 (351)
T ss_pred             HHHHHHH---HhCCCEEEEeCcchhhc--ccchHHH--hhhCCCEEEEecchHhcccchhceeeeecCH--------HHH
Confidence            6666655   45677899999998763  3222221  2334579999999999999999999999865        577


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... .+..+.+.|.++.++++.   .++++..+.++++++.+.+.|++++++. + .|.+|+|+|++++      
T Consensus       233 ~~~~~~~~-~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~~~~~~~i~~~------  300 (351)
T PRK14807        233 KYLNLVKS-PYNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIK-V-YPSKTNFILVKFK------  300 (351)
T ss_pred             HHHHHccC-CCCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcCCccEEEEEcC------
Confidence            87776544 355688899999999875   4677777788889999999998877876 5 4666889999886      


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCC-CCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIY-VGLKNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~-~~~~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                        +..++...+ .++||.|.++.. ++..+++||+++. +++.+.+++.|+++
T Consensus       301 --~~~~~~~~l-~~~gV~v~~~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~  349 (351)
T PRK14807        301 --DADYVYQGL-LERGILVRDFSKVEGLEGALRITVSS-CEANDYLINGLKEL  349 (351)
T ss_pred             --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEcCC-HHHHHHHHHHHHHh
Confidence              355666555 567999988653 3457899999975 34556666666654

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-41  Score=318.69  Aligned_cols=324  Identities=16%  Similarity=0.201  Sum_probs=256.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +++++||+.|.+.    +++++.+++++.+.+..  ...|+++.|..++|+++++++      ++++++|++|+|+++++
T Consensus        21 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al   88 (349)
T PRK07908         21 GPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF   88 (349)
T ss_pred             CCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            6789999999853    56788889999887753  357998889999999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..+++ + .+ +.++++.|+|..+...++..|.++..++++.+  +.+|++.+    +++++++++++|+||||.++|.+
T Consensus        89 ~~~~~-l-~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~  159 (349)
T PRK07908         89 ALLAR-L-RP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE  159 (349)
T ss_pred             HHHHh-c-CC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence            99998 4 56 56778899999999999999999999987643  67888754    34678999999999999999966


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      +   |.++|+ ++.++|+||+|+.+.. +. ..++... ..+++++++||||.|+++|+|+||++++.        ++++
T Consensus       160 ~---l~~l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~~~  224 (349)
T PRK07908        160 Q---LLALRR-PGRILVVDEAFADAVP-GE-PESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGAP--------DVLA  224 (349)
T ss_pred             H---HHHHHh-cCCEEEEECcchhhcc-CC-ccccccc-cCCCEEEEeecccccCCccceeeeeecCH--------HHHH
Confidence            5   455565 4788999999998753 32 3343332 23478999999999999999999999864        5777


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .++.... .+..+++.+.++..+++....+++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.      
T Consensus       225 ~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~~~~~~~~~------  295 (349)
T PRK07908        225 RLTRGRA-HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPAAAPFVLVRVPD------  295 (349)
T ss_pred             HHHhcCC-CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCCCceEEEEECCc------
Confidence            7776543 245667777777777764335678888999999999999999987 776 5477899999998862      


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                        ..++ .++++++||.+.||..|+.  ++++||+++ ++++++++++.|++++.
T Consensus       296 --~~~~-~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        296 --AELL-RKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK  346 (349)
T ss_pred             --HHHH-HHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence              3344 4555888999999998853  689999996 45677777777777654

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-42  Score=302.08  Aligned_cols=329  Identities=22%  Similarity=0.417  Sum_probs=278.2

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCC--CCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLP--YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQV  153 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~  153 (419)
                      ...|.+..|.+++|+++|+++.+..|  +..+|+++++++|+|.+++.++..|++|||.-++|.|.|+++..-++ ..|+
T Consensus       114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv  193 (471)
T KOG0256|consen  114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV  193 (471)
T ss_pred             HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence            34788999999999999999988554  55789999999999999999999999999999999999999865554 3488


Q ss_pred             EEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccccc
Q 014769          154 EVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF  227 (419)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~  227 (419)
                      +++++.+...+++++++++++.++.+      +.+.|+++||+||.|.+++++++..+++++.++|+.+|+||+|+...|
T Consensus       194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF  273 (471)
T KOG0256|consen  194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF  273 (471)
T ss_pred             eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence            99999999889999999999987653      567899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccC-----CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHH
Q 014769          228 GSIPYTPMGLFG-----SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQ  302 (419)
Q Consensus       228 ~~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~  302 (419)
                      +...+.++..+.     ..+++-++.|+||-+|+||+|+|.+.+.++       +++.+.++... .+..++..|..++.
T Consensus       274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-------~VvsaA~kmss-f~~vSs~tQ~~la~  345 (471)
T KOG0256|consen  274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-------DVVSAATKMSS-FGLVSSQTQYLLAS  345 (471)
T ss_pred             CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-------HHHHHHHHHhh-ccCCcHHHHHHHHH
Confidence            988777765432     334688999999999999999999999774       47776666655 46778999999999


Q ss_pred             HHcccc--hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc-cCCCCHHHHHHHHHHhcCeEee
Q 014769          303 ILEKTK--EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL-EDINDDIEFALKLAKEESVIVT  379 (419)
Q Consensus       303 ~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gv~v~  379 (419)
                      +|....  ..++.++..|++.+..++.+.|+++ |+.|. ..++|+|+|+++..... .......++..+++.+-++.++
T Consensus       346 LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlS  423 (471)
T KOG0256|consen  346 LLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLS  423 (471)
T ss_pred             HhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccC
Confidence            998732  5788999999999999999999998 88865 88999999999864211 1112345778888887799999


Q ss_pred             cCCCCCC--CCeEEEEeec-CHHHHHHHHHHHHHHHHHH
Q 014769          380 PGIYVGL--KNWLRIAFCA-EPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       380 ~g~~~~~--~~~~Ris~~~-~~~~l~~~l~~l~~~~~~~  415 (419)
                      ||+.|..  ++|+|++|+. .++.++-+++||+.++...
T Consensus       424 pG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~  462 (471)
T KOG0256|consen  424 PGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQ  462 (471)
T ss_pred             CCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhh
Confidence            9999865  7999999965 5566666999999998754

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-42  Score=325.51  Aligned_cols=321  Identities=20%  Similarity=0.331  Sum_probs=257.6

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      ...|+|+.+.+.    +++++.+        .....+.|+++. ..++++++++++      ++++++|++|+|+++++.
T Consensus        28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~~-~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~   88 (351)
T PRK01688         28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPECQ-PKAVIENYAAYA------GVKPEQVLVSRGADEGIE   88 (351)
T ss_pred             CCceEecCCCCC----CCCChhh--------cccccccCCCCC-hHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence            346899988642    3344432        112356788753 579999999998      689999999999999999


Q ss_pred             HHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          122 VILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       122 ~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      .++++++++| |+|+++.|+|..|...++..|.+++.+++++  ++.+|++.+++++ +++++++++|||||||.+++.+
T Consensus        89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~  165 (351)
T PRK01688         89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ  165 (351)
T ss_pred             HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence            9999999887 9999999999999999999999999998753  5789999999887 4789999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++|++.|++ +.++|+||+|.+|.... .  ....+...+++++++||||.|+++|+|+||++++.        ++++
T Consensus       166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~-s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~  233 (351)
T PRK01688        166 DLRTLLELTRG-KAIVVADEAYIEFCPQA-S--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVIN  233 (351)
T ss_pred             HHHHHHHhCCC-CcEEEEECchhhcCCCC-C--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHH
Confidence            99999999986 68899999999876321 1  11122344689999999999999999999999865        6778


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .++.... .+..+.+.+.++..+|+....+++++.++.++++++.+.+.|++++++..+ .|.+++|+|++++       
T Consensus       234 ~l~~~~~-~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~ps~~nfi~~~~~-------  304 (351)
T PRK01688        234 LLLKVIA-PYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQV-FDSETNYILARFT-------  304 (351)
T ss_pred             HHHhccC-CCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC-------
Confidence            8876644 356777778888888875334678888888999999999999988776423 6788999999885       


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCC-CCCCeEEEEeecCHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYV-GLKNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~-~~~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                       +..++...|+ ++||.|.++..+ +.++|+||++++ +++++.+++.|
T Consensus       305 -~~~~l~~~L~-~~gi~vr~~~~~~~~~~~iRis~~~-~~e~~~l~~al  350 (351)
T PRK01688        305 -ASSAVFKSLW-DQGIILRDQNKQPGLSNCLRITIGT-REECQRVIDAL  350 (351)
T ss_pred             -CHHHHHHHHH-HCCeEEEECCCcCCCCCeEEEeCCC-HHHHHHHHHhh
Confidence             3567777775 679999977654 557899999985 57888888776

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=3.1e-42  Score=322.94  Aligned_cols=327  Identities=23%  Similarity=0.394  Sum_probs=269.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|||++|++.    ++++|.+++++.++...  ...|+++.+ .++|+++++++      ++++++|++|+|+++++
T Consensus        18 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~l   84 (346)
T TIGR01141        18 GKEVIKLNSNENP----FGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEII   84 (346)
T ss_pred             CCceEEccCCCCC----CCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHHH
Confidence            4689999999863    56788899999887643  347887666 89999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++.+++++||+|++++|+|+.+...++..|.++..++++++  +.+|++.++++++++++++++++|+||||.++|.+
T Consensus        85 ~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~  162 (346)
T TIGR01141        85 ELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRS  162 (346)
T ss_pred             HHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999888888999999999887543  67899999998887889999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++.++++.|+ +++++|+|++|+.+...+... +  .....+++++++|+||.++++|+|+||++++.        ++++
T Consensus       163 ~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~-~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~  230 (346)
T TIGR01141       163 DIEAVLERTP-EDALVVVDEAYGEFSGEPSTL-P--LLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------EIID  230 (346)
T ss_pred             HHHHHHHhCC-CCcEEEEECchhhhcCCccHH-H--HHhhCCCEEEEehhhHhhhchhhhceeeecCH--------HHHH
Confidence            8888888887 799999999999766432211 1  12223468999999999989999999999864        5777


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .++.... .++.+.++|.++..+++.  ..++++.+++++++++.+.+.|++++++. + .|.+|+|+|+.++.      
T Consensus       231 ~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~g~~~~~~~~~------  299 (346)
T TIGR01141       231 ALNKVRA-PFNLSRLAQAAAIAALRD--DDFIEKTVEEINAERERLYDGLKKLPGLE-V-YPSDANFVLIRFPR------  299 (346)
T ss_pred             HHHhccC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCCcCCEEEEecCC------
Confidence            7776543 356688899988888876  34788888999999999999999887877 4 45678899998863      


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeecCHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                       ++.++...| .++||.+.||..|+. .+++|++++ ++++++++++.|
T Consensus       300 -~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l  345 (346)
T TIGR01141       300 -DADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL  345 (346)
T ss_pred             -CHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence             456777766 467999999998744 789999988 578899888876

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.3e-42  Score=322.60  Aligned_cols=304  Identities=20%  Similarity=0.321  Sum_probs=246.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEE
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEV  155 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~  155 (419)
                      ...|+++ +..+||++|++++      ++++++|++|+|+++++..++++++.+| |.|++++|+|..+...++..|.++
T Consensus        53 ~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~  125 (364)
T PRK04781         53 TRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPL  125 (364)
T ss_pred             hccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEE
Confidence            3578875 4699999999998      5789999999999999999999999998 799999999998888889999999


Q ss_pred             EEEeccC-CCCcccChHHHHHhh-cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769          156 RHFDLLP-ERNWEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT  233 (419)
Q Consensus       156 ~~~~~~~-~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  233 (419)
                      +.++++. ++++.+|++++.+.+ .++++++++++|+||||.+++.+++.++++.|++ ++++|+||+|.+|.+...   
T Consensus       126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~-~~~iI~Deay~~f~~~~~---  201 (364)
T PRK04781        126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG-KALVVVDEAYGEFSDVPS---  201 (364)
T ss_pred             EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC-CcEEEEeCcchhhcCCcc---
Confidence            9999753 345678888876544 5678999999999999999999999999998864 789999999999875321   


Q ss_pred             CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHH
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      .+...+..+++++++||||.|++||+|+||++++.        ++++.++.... .++.+.+.|.++..+|+....++..
T Consensus       202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~  272 (364)
T PRK04781        202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELIAVLRRCQA-PYPVPTPCAALAEQALSAPALAVTA  272 (364)
T ss_pred             hHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHHHHHHhccC-CCCCCHHHHHHHHHHHhcccHHHHH
Confidence            12223345689999999999999999999999865        68888887654 4567888888888888765445666


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEE
Q 014769          314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRI  392 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ri  392 (419)
                      +..+.++++++.+.+.|++++++..+ .|.+|+|+|++++        +..++...+ .++||.|.||..|. ..+|+||
T Consensus       273 ~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~~g~f~~~~~~--------~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~Ri  342 (364)
T PRK04781        273 RRVAEVRAERERLHAALAQLPGVRRV-YPSQGNFLLVRFD--------DAEAAFQAL-LAAGVVVRDQRAAPRLSDALRI  342 (364)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC--------CHHHHHHHH-HHCCeEEeeCCCCCCCCCeEEE
Confidence            67778899999999999988776424 6888999999986        345666555 67899999998653 4689999


Q ss_pred             EeecCHHHHHHHHHHHHHH
Q 014769          393 AFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       393 s~~~~~~~l~~~l~~l~~~  411 (419)
                      +++. +++.+.+++.|+++
T Consensus       343 s~~~-~~~~~~l~~al~~~  360 (364)
T PRK04781        343 TLGT-PEQNDRVLAALQRT  360 (364)
T ss_pred             eCCC-HHHHHHHHHHHHHH
Confidence            9986 35556666666543

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=2.2e-41  Score=317.69  Aligned_cols=329  Identities=22%  Similarity=0.294  Sum_probs=263.4

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      .++|+|+.|.+.    +++++.+++++.+.+..  ...|++ .|..++|+++++++      ++++++|++|+|+++++.
T Consensus        22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~-~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~   88 (352)
T PRK03321         22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYPD-MGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ   88 (352)
T ss_pred             ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCCC-CcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence            468999999864    45567899998877653  456864 79999999999998      578899999999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769          122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      .++..++++||+|+++.|+|..+...++..|.+++.+++++  ++.+|++.++++++++++++++++|+||||.++|.++
T Consensus        89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~  166 (352)
T PRK03321         89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTP--DHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE  166 (352)
T ss_pred             HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCC--CCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence            99999999999999999999988888889999999988753  3578999999999888899999999999999999888


Q ss_pred             HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769          202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS  281 (419)
Q Consensus       202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  281 (419)
                      +.++++.| ++++++|+||+|.++.+++....++..+...+++++++||||.|+++|+|+||++++.        ++++.
T Consensus       167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~~  237 (352)
T PRK03321        167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIAA  237 (352)
T ss_pred             HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHHH
Confidence            88887765 4699999999999988866433334344445689999999999999999999999864        57788


Q ss_pred             HHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCC
Q 014769          282 IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN  361 (419)
Q Consensus       282 l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~  361 (419)
                      +.... ..++.+.++|.++..++..  .+.+.+..+++.++++.+.+.|++. ++. + .+.+|+|+|++++.       
T Consensus       238 ~~~~~-~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~~~g~~i~i~l~~-------  304 (352)
T PRK03321        238 LRKVA-VPFSVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAA-GWT-V-PPSQANFVWLPLGE-------  304 (352)
T ss_pred             HHHhc-CCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCCCEEEEeCCC-------
Confidence            77653 3467788999888888864  2344455555666778888888886 665 4 45568899998852       


Q ss_pred             CHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       362 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      +..++...+ +++||.+.+   |+ ..++||+++ +.++.+++++.|++++.
T Consensus       305 ~~~~~~~~l-~~~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~  350 (352)
T PRK03321        305 RTADFAAAA-AEAGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA  350 (352)
T ss_pred             CHHHHHHHH-HHCCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence            456777776 678999987   33 456999985 45678888888887654

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=5.2e-41  Score=316.48  Aligned_cols=325  Identities=21%  Similarity=0.349  Sum_probs=259.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE-cccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV-TLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~-t~g~~~a  119 (419)
                      +.++|+|+.|++.    ++++|.+.+++.+.+..  ...|+++. ..++|+++++++      ++++++|++ ++|++++
T Consensus        33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~   99 (361)
T PRK00950         33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV   99 (361)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence            4589999999753    45678888888877653  34688754 499999999998      678899999 7899999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++++++++||.|++++|+|+.+...++..|.+++.++.  +.++.+|++.+++.++++++++++++|+||||.++|.
T Consensus       100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~  177 (361)
T PRK00950        100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE  177 (361)
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence            99999999999999999999999988888999999988874  3456899999999888788999999999999999995


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +   ++.++|+++|+++|+||+|.++.  +....++  ....+++++++||||.++++|+|+||+++++        +++
T Consensus       178 ~---~l~~l~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~~  242 (361)
T PRK00950        178 E---DIRKILESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WLI  242 (361)
T ss_pred             H---HHHHHHHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HHH
Confidence            5   55555668899999999998865  2222221  2233578999999999999999999999865        577


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... .+..+.+.|.++..+++.  .+++++..++++++++.+.+.|.    +. + .|.+|+|+|++++.     
T Consensus       243 ~~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~~~~~~i~~~~~~-----  308 (361)
T PRK00950        243 DYYMRAKT-PFSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP----FK-V-YPSEANFVLVDVTP-----  308 (361)
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC----ee-E-CCCcceEEEEECCC-----
Confidence            77776554 345678888888888875  56788888888888888877765    33 3 46678999998842     


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                       .+..+++..++ ++||.+.||..|+.  ++++|++++ +.++++++++.|++++
T Consensus       309 -~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il  360 (361)
T PRK00950        309 -MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV  360 (361)
T ss_pred             -CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence             25778888875 57999999988854  579999998 4568999999998875

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=6.7e-41  Score=296.92  Aligned_cols=393  Identities=20%  Similarity=0.281  Sum_probs=297.9

Q ss_pred             ccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHH---H---------------H
Q 014769            7 NKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAED---A---------------I   68 (419)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~---a---------------~   68 (419)
                      ++.+....-+...++...++.+.. +.+    +.+.++|.|+.|-|... .||......+   .               +
T Consensus         6 ~dys~~ls~es~srk~~p~~~~~~-~~s----~~~i~~i~lagGlPnp~-~fp~~~~s~~p~~~~~~e~~~~~~~~~~~~   79 (472)
T KOG0634|consen    6 KDYSHHLSKESASRKLSPLRALGD-IKS----ASPISIISLAGGLPNPD-YFPIRSDSIKPQGSWKKENGKKLNNVTFAF   79 (472)
T ss_pred             ccHHHHhcccccccccChHHHhhh-Hhh----cCCCceEEecCCCCCCC-cccccccccccccCccccccccccceeeec
Confidence            444555554566777777777765 322    33556999999977643 2444332222   0               0


Q ss_pred             HHHHhCC-----CCCCCCCCCCCHHHHHHHHHHHH-hhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCC
Q 014769           69 VDAVRSG-----KFNCYATNSGIPPARRAIADYLS-RDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP  142 (419)
Q Consensus        69 ~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~l~-~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~  142 (419)
                      .+..+..     ...+|+++.|.++|...|.++.. ..+......-+|++|+|.+.+++.+++.++++||.|+++.++|.
T Consensus        80 ~~~~~~~~l~~s~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~  159 (472)
T KOG0634|consen   80 ENEASENTLPLSRALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYP  159 (472)
T ss_pred             cccCCcccchhhhhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccch
Confidence            0001110     12489999999999999999665 22333334459999999999999999999999999999999999


Q ss_pred             CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--------CccEEEEeCC--CCccccCCCHHHHHHHHHHHHhC
Q 014769          143 YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--------NTAAMVIINP--GNPCGNVFTYHHLQEIAEMARKL  212 (419)
Q Consensus       143 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~  212 (419)
                      +-....+..|+.++.++++.   .++++|.|++.+..        ..+-|+.+-|  +||||..++.+..++|.++|++|
T Consensus       160 ~AL~s~~a~gv~~ipv~md~---~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy  236 (472)
T KOG0634|consen  160 SALQSMEALGVKIIPVKMDQ---DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY  236 (472)
T ss_pred             HHHHhccccCceEEeccccC---CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc
Confidence            98888999998888777743   36899999887643        1134666666  89999999999999999999999


Q ss_pred             CCeEEEcccccccccCC--------CC-----------CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769          213 RVMVVADEVYGHLTFGS--------IP-----------YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF  273 (419)
Q Consensus       213 ~~~li~De~~~~~~~~~--------~~-----------~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  273 (419)
                      +++||+||+|..+.++.        .+           .+++..++.+++||.+.||||. .+||+|+||+.+++     
T Consensus       237 DfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~-----  310 (472)
T KOG0634|consen  237 DFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS-----  310 (472)
T ss_pred             CEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH-----
Confidence            99999999999988872        11           2334566778899999999998 69999999999876     


Q ss_pred             chhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccch----HHHHHHHHHHHHHHHHHHHHhhc-CCCC-CCCCCCCceE
Q 014769          274 QKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKE----DFFCKLIDTLRESAEICYDGVKE-IPCI-SCPNKPEGSM  346 (419)
Q Consensus       274 ~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~-~~~~-~~~~~p~~g~  346 (419)
                         .+++++-.... .+.+++...|..+.++|....+    +|+.+.+..|..+++.+..+|.+ +|.- ..+..|.+||
T Consensus       311 ---~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGm  387 (472)
T KOG0634|consen  311 ---LFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGM  387 (472)
T ss_pred             ---HHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcce
Confidence               35565555543 3566888999999999987654    67888888999999999999987 6754 3367999999


Q ss_pred             EEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCC------C-CeEEEEee-cCHHHHHHHHHHHHHHHHHH
Q 014769          347 VTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGL------K-NWLRIAFC-AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       347 ~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~-~~~Ris~~-~~~~~l~~~l~~l~~~~~~~  415 (419)
                      |+|++++....   +......++...++.++||.+.+|..|..      . -++|++++ .+.|+++++++++..+++++
T Consensus       388 Fiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~  467 (472)
T KOG0634|consen  388 FIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH  467 (472)
T ss_pred             EEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence            99999972111   01122567777888999999999999964      2 38999995 68899999999999999988


Q ss_pred             hc
Q 014769          416 TK  417 (419)
Q Consensus       416 ~~  417 (419)
                      ..
T Consensus       468 f~  469 (472)
T KOG0634|consen  468 FI  469 (472)
T ss_pred             hh
Confidence            64

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.7e-41  Score=315.69  Aligned_cols=321  Identities=17%  Similarity=0.277  Sum_probs=251.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.+.|+|+.|.+.    +++++.+     . ..  ....|+++ +..+||+++|+++      ++++++|++|+|+++++
T Consensus        30 ~~~~~~l~~ne~~----~~~~~~~-----~-~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i   90 (354)
T PRK04635         30 GRGDIWINANESP----FNNEYKL-----D-LA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAI   90 (354)
T ss_pred             CCCcEEeeCCCCC----CCCChhh-----h-hH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence            3567999999753    3333332     1 11  24579875 5899999999998      78999999999999999


Q ss_pred             HHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          121 EVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ..++++++++| |+|++++|+|..|...++..|.+++.++++.  ++.+|++.++. + ++++++++++||||||.+++.
T Consensus        91 ~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~  166 (354)
T PRK04635         91 ELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDR  166 (354)
T ss_pred             HHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCH
Confidence            99999999998 9999999999999988999999999998753  46788888873 4 578999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|++.|+  ++++|+||+|..+.... ....+  ....+++++++||||.|+++|+|+||+++++        +++
T Consensus       167 ~~l~~l~~~~~--~~~vivDeay~~~~~~~-s~~~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~  233 (354)
T PRK04635        167 ADIEQLIEMTP--DAIVVVDEAYIEFCPEY-SVADL--LASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELI  233 (354)
T ss_pred             HHHHHHHHhCC--CcEEEEeCchHhhccCc-chHHH--HhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHH
Confidence            99999998876  49999999999876321 11111  2334678999999999999999999999865        577


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.+..... .++.+.+.|.++.+++.....+++++..+.++++++.+.+.|++++++. +.++ .|.|+|++++      
T Consensus       234 ~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~-~g~f~~~~~~------  304 (354)
T PRK04635        234 EILMRVIA-PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-VLEG-NGNYVLAKFD------  304 (354)
T ss_pred             HHHHhhcC-CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-ECCC-CCcEEEEECC------
Confidence            77765443 3556777888888888654345677778889999999999999886566 4344 5779999885      


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                        +..++.. ++.++||.+.++..++.++++|||++. +++++.+++.|++
T Consensus       305 --~~~~~~~-~l~~~gv~v~~~~~~~~~~~lRis~~~-~e~~~~l~~al~~  351 (354)
T PRK04635        305 --DVDAVFK-ALWDAGIVARAYKDPRLANCIRFSFSN-RAETDKLIGLIRN  351 (354)
T ss_pred             --CHHHHHH-HHHHCCEEEEECCCCCCCCeEEEEeCC-HHHHHHHHHHHHH
Confidence              3455654 457889999877655557899999974 6788888887754

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-40  Score=308.71  Aligned_cols=317  Identities=17%  Similarity=0.251  Sum_probs=248.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .+.++|+|+.|++    .+++++.+++++.+.+.....+.|+++ |.++||+++++|+.+.+   +++++|++|+|++++
T Consensus        17 ~~~~~i~l~~~~~----~~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~   88 (335)
T PRK14808         17 EKRDRTYLALNEN----PFPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI   88 (335)
T ss_pred             CCCceeEecCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence            3678999999985    467889999999887765545557764 89999999999996532   789999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..+++++    |.|++++|+|+.+...++..|.+++.++++++  +.++...    +. .++++++++||||||.+++.
T Consensus        89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~~-~~~~i~i~nP~NPTG~~~s~  157 (335)
T PRK14808         89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----VG-EGDVVFIPNPNNPTGHVFER  157 (335)
T ss_pred             HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----cc-CCCEEEEeCCCCCCCCCcCH
Confidence            99999988    77999999999999999999999999987543  3344222    22 46889999999999999998


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|+    +++++||+||+|..+.  +....+  .....+++++++||||.|+++|+|+||++++.        +++
T Consensus       158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~~  221 (335)
T PRK14808        158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KFI  221 (335)
T ss_pred             HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeCH--------HHH
Confidence            8888776    4799999999999874  222222  12233579999999999999999999999975        588


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.+..... .++.+.++|.++..+++.  .++..+..+.++++++.+.+.|+++ ++. +..| .|.|+|++++.     
T Consensus       222 ~~l~~~~~-~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~g~f~~~~l~~-----  290 (335)
T PRK14808        222 DAYNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDS-RGNFVFIFMEK-----  290 (335)
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCC-CCeEEEEeCCC-----
Confidence            88876553 356788889998888874  4567777788888899999999987 676 4355 56688998873     


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                       .+..++...+ .++||.|..   |  .+++||+++.. ++.+++++.|+.
T Consensus       291 -~~~~~~~~~l-~~~Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~~  333 (335)
T PRK14808        291 -EEKERLLEHL-RAKNIAVRS---F--REGVRITIGKR-EENDMILKELEV  333 (335)
T ss_pred             -ccHHHHHHHH-HHCCeEEEE---C--CCCeEEecCCH-HHHHHHHHHHHh
Confidence             1345565554 678999985   2  47899999774 566777777764

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.3e-40  Score=309.13  Aligned_cols=295  Identities=17%  Similarity=0.198  Sum_probs=232.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEE
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVR  156 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~  156 (419)
                      ...|+++ -..+||+++++++      ++++++|++|+|+++++..++.. .++| .|++++|+|+.|...++..|.+++
T Consensus        34 ~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~~~~~-~~~~-~vv~~~P~y~~y~~~~~~~G~~v~  104 (332)
T PRK06425         34 ISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYRLLSY-INVG-NIIIVEPNFNEYKGYAFTHGIRIS  104 (332)
T ss_pred             cccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHHHHHH-hCCC-cEEEeCCChHHHHHHHHHcCCeEE
Confidence            3578764 4789999999998      67899999999999999999974 5675 577779999999999999999999


Q ss_pred             EEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769          157 HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG  236 (419)
Q Consensus       157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  236 (419)
                      .++++.   +..+.+.++.   .+++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++. .....
T Consensus       105 ~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~  177 (332)
T PRK06425        105 ALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA-EEDVL  177 (332)
T ss_pred             EEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc-hhHHH
Confidence            999853   3456555543   3788999999999999999999999999999999999999999999887542 11122


Q ss_pred             ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc-hHHHHHH
Q 014769          237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK-EDFFCKL  315 (419)
Q Consensus       237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~  315 (419)
                      .....+++|+++||||.|++||+|+||+++++        ++++.+..... .+..+..++.+    +.... ..++++.
T Consensus       178 ~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~l~~~~~-~~~~~~~~~~~----l~~~~~~~~~~~~  244 (332)
T PRK06425        178 LNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKISRKITE-PWSVCDPAIDF----IRSIDLDYVAKHS  244 (332)
T ss_pred             HhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHHHHHcCC-CCccCHHHHHH----HHHhhhHHHHHHH
Confidence            22334689999999999999999999999975        67787776543 23334333322    22222 3456778


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEE
Q 014769          316 IDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIA  393 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris  393 (419)
                      ++.++++++.+.+.|+++ ++. +..|.+|+|+|++++        ++.++...+++ +||.+.||..|+.  ++|+||+
T Consensus       245 ~~~~~~~r~~l~~~L~~~-g~~-~~~~~~g~f~~~~~~--------~~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis  313 (332)
T PRK06425        245 LDIMENERSYLINNLEAM-GFR-AAGDPSANFITFMIP--------DAHDFYSYLLK-NGILVRLLDDYECLGEQYIRIA  313 (332)
T ss_pred             HHHHHHHHHHHHHHHHHC-CCE-ECCCCCceEEEEEcC--------CHHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEE
Confidence            899999999999999988 676 334567889999875        36778777755 6999999998854  4799999


Q ss_pred             eecCHHHHHHHHHHHHHHH
Q 014769          394 FCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       394 ~~~~~~~l~~~l~~l~~~~  412 (419)
                      ++.. ++.+.+++.|++++
T Consensus       314 ~~~~-~~~~~l~~al~~~~  331 (332)
T PRK06425        314 IRRR-SFNIKLVNALRNFL  331 (332)
T ss_pred             eCCH-HHHHHHHHHHHHHh
Confidence            9864 57788888887664

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.2e-40  Score=306.06  Aligned_cols=318  Identities=20%  Similarity=0.295  Sum_probs=248.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|+|+.|.+.    +++++.+.+++.+++.......|++ .|.+++|+++++++      ++++++|++|+|+++++
T Consensus        17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l   85 (337)
T PRK03967         17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI   85 (337)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence            4578999999853    5677889999988876544567875 69999999999999      57899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++..+  +||+|+++.|+|..+...++..|.+++.++++.  ++.+|++.+++.+ ++++++++++|+||||.+++.+
T Consensus        86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~  160 (337)
T PRK03967         86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE  160 (337)
T ss_pred             HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence            9988877  799999999999988888899999999998753  4689999998765 4678899999999999999976


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++.++   + ++++++|+||+|..+..  ....+  .....+++++++||||.|+++|+|+||+++++        ++++
T Consensus       161 ~l~~i---~-~~~~~ii~De~y~~~~~--~~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i~  224 (337)
T PRK03967        161 EILKV---L-ETGKPVVLDEAYAEFSG--KSLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EIID  224 (337)
T ss_pred             HHHHH---H-hcCCEEEEECchhhhcc--cchHH--HHhhCCCEEEEecchHhhcchhhhheeeecCH--------HHHH
Confidence            66555   4 36999999999998752  22211  12334579999999999999999999999864        6788


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .+..... .++.+.++|.++..+++.  .++..+..+.+.++++.+.+.|.+.     . .|.+++|+|++++       
T Consensus       225 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~~~~~~~~~~-------  288 (337)
T PRK03967        225 ALYRIKP-PFSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY-----A-YPSDANFLLLKLD-------  288 (337)
T ss_pred             HHHhhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC-----c-CCCCCcEEEEhHH-------
Confidence            8877654 356788999999999875  4566666667777788888887653     2 5788999998652       


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                           +...| .++||.|.++.. ...+++||+++. +++.+++++.|.++...
T Consensus       289 -----~~~~l-~~~gi~v~~~~~-~~~~~~Ri~~~~-~~~~~~l~~~l~~~~~~  334 (337)
T PRK03967        289 -----AYDYL-LENGIVVRKLSG-RLEGHIRVTVGK-REENDEFIKALKEIKEG  334 (337)
T ss_pred             -----HHHHH-HHCCEEEEeCCC-CCCCeEEEecCC-HHHHHHHHHHHHHHHHh
Confidence                 44555 457999987653 346799999975 34445555555555443

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=1.3e-39  Score=301.94  Aligned_cols=308  Identities=17%  Similarity=0.178  Sum_probs=236.5

Q ss_pred             CCeeeccCC-CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           42 RPVVPLGYG-DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        42 ~~~i~l~~g-~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      .++|+|+.| +|.    .++++.+.+   ..+     ..|+.  +..+||++|++++        .+++|++|+|+++++
T Consensus        20 ~~~i~l~~ne~p~----~~~~~~~~~---~~~-----~~yp~--~~~~Lr~~ia~~~--------~~~~I~it~Gs~~al   77 (330)
T PRK05664         20 ADWLDLSTGIAPW----PWPVPAIPA---DAW-----ARLPE--TDDGLEAAARAYY--------GAPQLLPVAGSQAAI   77 (330)
T ss_pred             HHheeecCCcCCC----CCCCcccCH---HHH-----HhCCC--ChHHHHHHHHHHh--------CCCCEEECcCHHHHH
Confidence            457999999 432    111122211   122     24765  3489999999998        247999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++.  +.+||+|++++|+|+.+...++..|.+++.++++          .++.+++ +++++++++||||||.+++.+
T Consensus        78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~  144 (330)
T PRK05664         78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD-SLDVLVVVNPNNPTGRRFDPA  144 (330)
T ss_pred             HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc-CCCEEEEeCCcCCCCCccCHH
Confidence            98864  4799999999999999999999999999888642          3444453 677899999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++|+++|++++++||+||+|..+.    +..++..+...+++++++||||.|++||+|+||++++.        ++++
T Consensus       145 ~l~~l~~~~~~~~~~iI~DE~y~~~~----~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l~~  212 (330)
T PRK05664        145 RLLAWHARLAARGGWLVVDEAFMDNT----PQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------ALLR  212 (330)
T ss_pred             HHHHHHHHHHhcCCEEEEECCcccCC----CcccccccccCCCEEEEeeccccccCCCcceEEEEeCH--------HHHH
Confidence            99999999999999999999998653    11234444455689999999999999999999999865        5778


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .+..... .+..+.+.|.++..+|+.  ..+.++.+++++++++.+.+.|+++ ++. . .+..++|+|++++       
T Consensus       213 ~~~~~~~-~~~~~~~~~~~~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~-~~~~~~f~~~~~~-------  279 (330)
T PRK05664        213 ALAELLG-PWTVSGPTRWLAQAALAD--TPWQRRQRERLLAASQRLAALLRRH-GLT-P-AGGCALFQWVRTE-------  279 (330)
T ss_pred             HHHHhcC-CCCCCHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cCCcceEEEEecC-------
Confidence            7776543 346678889999999875  3567778899999999999999987 553 2 2333478888764       


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                       ++.++...+ .++||.|.+   |+..+++||+++.++++.+++++.|+++.++
T Consensus       280 -~~~~~~~~l-~~~gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~~  328 (330)
T PRK05664        280 -DAAALHEFL-ARRGILTRL---FEQPASLRFGLPADEADWARLDQALLAYRKE  328 (330)
T ss_pred             -CHHHHHHHH-HHCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence             456676665 677999974   4556899999986666777777777665543

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=8.5e-40  Score=303.33  Aligned_cols=312  Identities=18%  Similarity=0.228  Sum_probs=250.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .++++++|+.|.+..    +++  ..+...     ..+..|+++.+ +++|+.+++++      ++++++|++|+|++++
T Consensus        15 ~~~~~~~~~~~~~~~----~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~   76 (330)
T TIGR01140        15 PPEDWLDFSTGINPL----GPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEA   76 (330)
T ss_pred             ChhheeEccccCCCC----CCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHH
Confidence            467899999997542    222  112111     12457888765 99999999998      5678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..+..++ .+| .|++++|+|..+...++..|.++..++         |++.+++.++ +++++++++|+||||.+++.
T Consensus        77 i~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~  144 (330)
T TIGR01140        77 IYLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPP  144 (330)
T ss_pred             HHHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCH
Confidence            99987775 567 799999999999999999999888765         7788888884 57789999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++++|+++|+++|+++|+||+|..+.+..    ++... +..+++++++||||.++++|+|+||+++++        ++
T Consensus       145 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~~  212 (330)
T TIGR01140       145 ETLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------AL  212 (330)
T ss_pred             HHHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------HH
Confidence            999999999999999999999999876531    22222 234678999999999999999999999865        57


Q ss_pred             HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      ++.+..... .++.+.++|.++..+++.  .++.+..+++++++++.+.+.|++++.+. + .|.+|+|+|++++     
T Consensus       213 ~~~l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~f~~~~~~-----  282 (330)
T TIGR01140       213 LARLREALG-PWTVNGPARAAGRAALAD--TAWQAATRARLAAERARLAALLARLGGLE-V-VGGTALFLLVRTP-----  282 (330)
T ss_pred             HHHHHhcCC-CCCchHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCeEEEEEcC-----
Confidence            777776654 356788899999999975  46677888999999999999999985555 4 5668899999876     


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                         +..+++++|+ ++||.+.||..|..  .+++|+++++..++ +.+++.|
T Consensus       283 ---~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l  329 (330)
T TIGR01140       283 ---DAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL  329 (330)
T ss_pred             ---CHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence               3567887775 57999999999852  57999999876655 7776665

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.9e-39  Score=301.24  Aligned_cols=310  Identities=12%  Similarity=0.150  Sum_probs=241.8

Q ss_pred             CCeeeccCCCCCCCCCCCCh-HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTA-VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQA  119 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~-~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~a  119 (419)
                      .++|+|+.+...    ++++ +.+..   ..     ...|+++.  .+||+++++++      ++. +++|++|+|++++
T Consensus        24 ~~~i~ls~Nenp----~~~~~~~~~~---~~-----~~~Yp~~~--~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~   83 (339)
T PRK06959         24 DAWLDLSTGINP----HGYPVPPVPA---DA-----WRRLPEDD--DGLAACAARYY------GAPDAAHVLPVAGSQAA   83 (339)
T ss_pred             hhhceeccCCCC----CCCCCCCCCH---HH-----HHhCCCch--HHHHHHHHHHh------CCCCcccEEECcCHHHH
Confidence            467999999632    1222 11111   11     23588753  89999999998      554 5899999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..+.. ++++|| |++++|+|+.|...++..|.+++.++.+.        +.+    .+..+.+++++||||||.+++.
T Consensus        84 i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~  149 (339)
T PRK06959         84 IRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPA  149 (339)
T ss_pred             HHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCH
Confidence            997765 457776 88999999999999999999988876532        222    2245689999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|++.|.+++.++|+||+|.++.+.    .++..+...+++++++||||.|++||+|+||++++.        +++
T Consensus       150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~li  217 (339)
T PRK06959        150 ARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------ALL  217 (339)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--------HHH
Confidence            99999999999999999999999987642    223333234579999999999999999999999865        688


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... .+..+.++|.++.++|+.  .++.++.++.++++++.+.+.|+++ ++. + . .+++|+|++++      
T Consensus       218 ~~l~~~~~-~~~vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~-~~~~f~~~~~~------  284 (339)
T PRK06959        218 AALRDALG-AWTVSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAH-GFA-V-H-ATPLFSWTDDP------  284 (339)
T ss_pred             HHHHHhcC-CCCCcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-c-CcceEEEEeCC------
Confidence            88887654 456788999999999975  5778888999999999999999988 776 3 2 35789999875      


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                        +..++...| .++||.|..   |+..+++||+++.++++.+.+++.|+++++.++
T Consensus       285 --~~~~l~~~l-~~~GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~  335 (339)
T PRK06959        285 --RAAALHAAL-ARRGIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLA  335 (339)
T ss_pred             --CHHHHHHHH-HhCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence              355676666 567999974   445679999997667788999999988777654

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=1.9e-38  Score=291.84  Aligned_cols=301  Identities=15%  Similarity=0.237  Sum_probs=224.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ..++|+|+.|.+   | ++ ++.+.+++.++++.  ...|+.   ...+|+++++++      +   ++|++|+|+++++
T Consensus         7 ~~~~i~l~~~~n---p-~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~------~---~~I~vt~G~~~al   67 (311)
T PRK08354          7 EEGLIDFSASVN---P-YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLF------G---EPIVITAGITEAL   67 (311)
T ss_pred             ccceeEecCCCC---C-CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHH------C---CCEEECCCHHHHH
Confidence            456899999953   2 23 47888888877653  346764   467999999987      2   4799999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++..+. +||+|++++|+|+.+...++..|.++..++        +|++.+++.++ +++.+++++|+||||.+++.+
T Consensus        68 ~~~~~~~~-~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~  137 (311)
T PRK08354         68 YLIGILAL-RDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFK  137 (311)
T ss_pred             HHHHHhhC-CCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHH
Confidence            98886554 899999999999999999999999886542        57888888776 567899999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++|+++|+++|+++|+||+|.++.+++...       ..+++++++||||.|++||+|+||+++           +.+
T Consensus       138 ~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~-------~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~~  199 (311)
T PRK08354        138 ELKPLLDAVEDRNALLILDEAFIDFVKKPESP-------EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FEE  199 (311)
T ss_pred             HHHHHHHHhhhcCcEEEEeCcchhcccccccc-------CCCcEEEEeccHhhcCCccceeeeeee-----------hHH
Confidence            99999999999999999999999988764211       145799999999999999999999997           234


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .++.... .+..+...+.++..+++. ..+++.+.++.+++.++.+.+.+        ...|+++++ |++++       
T Consensus       200 ~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~~~~~-~~~~~-------  261 (311)
T PRK08354        200 AFRSVRM-PWSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERFEKAL--------YVKSDANFF-IKDVG-------  261 (311)
T ss_pred             HHHHcCC-CccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhc--------CCCCCCcEE-EEECC-------
Confidence            4444332 344556666666666653 22444455555555444443322        124555544 46553       


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC--HHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE--PSALKDGLGRM  408 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~--~~~l~~~l~~l  408 (419)
                       ++.+++..+ .++||.|.||..|+.++|+||+++.+  .+.+..+++.+
T Consensus       262 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~~  309 (311)
T PRK08354        262 -DAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALREW  309 (311)
T ss_pred             -CHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence             456777766 66799999999998789999999753  34555555443

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=3.5e-36  Score=282.91  Aligned_cols=346  Identities=29%  Similarity=0.500  Sum_probs=276.6

Q ss_pred             eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHH
Q 014769           45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVIL  124 (419)
Q Consensus        45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~  124 (419)
                      |||+.|++.    +..++.++.++...-.......|.++.|..++++.+++++...++....++++++++|+++++..++
T Consensus         1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~   76 (350)
T cd00609           1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL   76 (350)
T ss_pred             CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence            578888753    3455555555544222223457888899999999999999987776677889999999999999999


Q ss_pred             HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769          125 SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE  204 (419)
Q Consensus       125 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  204 (419)
                      .++..+||+|+++.|+|.++...++..|..++.++.+.......+.+.++....++++++++++|+||||.++|.+++++
T Consensus        77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~  156 (350)
T cd00609          77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE  156 (350)
T ss_pred             HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence            99999999999999999999999999999999998865443333335666666778899999999999999999999999


Q ss_pred             HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh
Q 014769          205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD  284 (419)
Q Consensus       205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~  284 (419)
                      |+++|+++|+++|+|++|+.+.+.+.....+...+..+.+++++|++|.++.+|+++|+++++++       ++.+.++.
T Consensus       157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-------~~~~~~~~  229 (350)
T cd00609         157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------ELLERLKK  229 (350)
T ss_pred             HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-------HHHHHHHH
Confidence            99999999999999999998877654432222334445679999999998879999999998652       36677766


Q ss_pred             hhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCH
Q 014769          285 CLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDD  363 (419)
Q Consensus       285 ~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~  363 (419)
                      ... .+++++...+.++..+++... ++.++.+++++++++.+.+.|++++... +..+.+|+++|++++..      ..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~g~~~~~~~~~~------~~  301 (350)
T cd00609         230 LLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEG------DD  301 (350)
T ss_pred             HHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCccEEEEEecCCC------Ch
Confidence            543 246778888888888888643 6788888999999999999999874443 24678899999988642      24


Q ss_pred             HHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeecCHHHHHHHHHHHH
Q 014769          364 IEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       364 ~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      .+.+.+++.++||.+.++..|.  .+.++|++++...++++.++++|+
T Consensus       302 ~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~  349 (350)
T cd00609         302 EEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA  349 (350)
T ss_pred             HHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence            5666777788999999998876  578999999755999999999886

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.2e-36  Score=255.50  Aligned_cols=370  Identities=22%  Similarity=0.370  Sum_probs=274.6

Q ss_pred             CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHH
Q 014769           20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPARRAIAD   95 (419)
Q Consensus        20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~   95 (419)
                      -.-++|.++|.++-.-++   .+..|.|+-|+|...|  ......++...+.+.++    ...+|..++|...|.++++.
T Consensus        11 t~~sGi~~lMdDl~d~Lr---t~g~imLggGNPa~iP--em~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~   85 (417)
T COG3977          11 TRHSGITQLMDDLNDGLR---TPGAIMLGGGNPARIP--EMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAK   85 (417)
T ss_pred             hhhhhHHHHHHHHHhhcc---CCCceeeCCCCcccCh--hHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHH
Confidence            346789999999887664   4459999999987643  23445555555555544    24589999999999999999


Q ss_pred             HHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC---CC--CeEEee-CCCCCCcHHHHhhcCCEEEE---EeccCCCC-
Q 014769           96 YLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR---PG--ANVLLP-RPGWPYYEGIAQRKQVEVRH---FDLLPERN-  165 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~---~g--d~vlv~-~p~~~~~~~~~~~~g~~~~~---~~~~~~~~-  165 (419)
                      ++++.+|..+++++|.+|+|++.+++-++..+..   .|  ..|+.| .|.|.+|..+...-..=+.+   +.+.+.+. 
T Consensus        86 ~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~F  165 (417)
T COG3977          86 MLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQF  165 (417)
T ss_pred             HHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccce
Confidence            9999999999999999999999999999998864   23  456666 89999986543211111111   11222222 


Q ss_pred             -cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc----ccCC
Q 014769          166 -WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG----LFGS  240 (419)
Q Consensus       166 -~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~----~~~~  240 (419)
                       +.+|.+.+.  +.+.+.+++++.|.||||.+++.+++.+|.+++++||+.+++|.+|+.      +++.+-    ..--
T Consensus       166 KY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~------PFP~iifsd~~~~w  237 (417)
T COG3977         166 KYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV------PFPGIIFSDATPLW  237 (417)
T ss_pred             eeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC------CCCceecccccccC
Confidence             456777664  345788899999999999999999999999999999999999999974      222221    1122


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHH--HHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCK--LID  317 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~--~~~  317 (419)
                      .++++.|.|+||. |+||.|+|.+++..        ++++.+..... .+..+....++.++.+++.+.-..+.+  .+-
T Consensus       238 ~~NiilC~SLSK~-GLPG~R~GIiIane--------~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrP  308 (417)
T COG3977         238 NENIILCMSLSKL-GLPGSRCGIIIANE--------KVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRP  308 (417)
T ss_pred             CCCEEEEeehhhc-CCCCcceeEEEccH--------HHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhH
Confidence            3579999999998 99999999999865        68888887753 356777888888889998865322222  223


Q ss_pred             HHHHHHHHHHHHhhc-CCCCCC-CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---------
Q 014769          318 TLRESAEICYDGVKE-IPCISC-PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---------  386 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~-~~~~~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------  386 (419)
                      -|+++.+...+.|+. +|...| .+.|+|+.|+|+-+.+..+    +.+++..+| +..||+++||+.|..         
T Consensus       309 FY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI----tt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~  383 (417)
T COG3977         309 FYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI----TTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHT  383 (417)
T ss_pred             HHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC----CHHHHHHHH-HhCeEEEecccccCCCCCCCCCCc
Confidence            445555555555554 433221 4589999999998876543    567777666 778999999999853         


Q ss_pred             CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          387 KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       387 ~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +.|+|++...++++++.++.+|.+.+++.-
T Consensus       384 hqC~Rmn~~~~~~~ie~Gva~lae~ve~~y  413 (417)
T COG3977         384 HQCMRMNYVPEPEKIEKGVAILAEEVERAY  413 (417)
T ss_pred             cceEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence            468999999999999999999999987653

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-36  Score=265.82  Aligned_cols=335  Identities=25%  Similarity=0.400  Sum_probs=267.9

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-CCCeEEeeCCCCCCcHHHHhhcCC
Q 014769           75 GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQRKQV  153 (419)
Q Consensus        75 ~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~~~g~  153 (419)
                      +....|+.++|++-+|+.+|+|+.++.|.+.+|++|++|+|++.|+..++..++. +.+.|++|-|.|+.|...+..+|.
T Consensus       104 Gs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~  183 (475)
T KOG0258|consen  104 GSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGG  183 (475)
T ss_pred             CcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCC
Confidence            3567899999999999999999999999999999999999999999999999864 679999999999999999999999


Q ss_pred             EEEEEeccCCCCcccChHHHHHhhcC-----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC
Q 014769          154 EVRHFDLLPERNWEVDLDAVEALADK-----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG  228 (419)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~  228 (419)
                      ..+.+.++.+++|.+|.++|++.+.+     +++++++.||.||||++++.+-+++|+.+|.+++++++.||+|....|.
T Consensus       184 ~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~  263 (475)
T KOG0258|consen  184 TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYT  263 (475)
T ss_pred             cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccC
Confidence            99999999999999999999886653     5788999999999999999999999999999999999999999998887


Q ss_pred             CC-CCCCccc----cC----CCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHH
Q 014769          229 SI-PYTPMGL----FG----SIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQG  298 (419)
Q Consensus       229 ~~-~~~~~~~----~~----~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  298 (419)
                      .. .+.++..    ++    +...++.++|.||.+.. -|.|-||+-+-+-.     ++..+.+.+..+..-.++...|.
T Consensus       264 ~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----prv~~qi~Kl~si~lc~~V~GQ~  338 (475)
T KOG0258|consen  264 TGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----PRVKQQIKKLASIKLCPQVSGQK  338 (475)
T ss_pred             CCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----hhHHHHHHHHHhhhhcCCccchh
Confidence            54 4444321    11    22246889999999654 58999998664421     24555555554444455666676


Q ss_pred             HHHHHHcccc---------hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcc-------cccCCCC
Q 014769          299 AIPQILEKTK---------EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPW-------LLEDIND  362 (419)
Q Consensus       299 a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~  362 (419)
                      .....+....         ..........++.+.+.+.+.++.++|+.|. +++|+||++.++.-.       ...++..
T Consensus       339 ~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~i~lP~kaie~A~~~~~~P  417 (475)
T KOG0258|consen  339 LVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQISLPPKAIEAAKALGIAP  417 (475)
T ss_pred             hhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeecccccCCHHHHHHHHHhCCCC
Confidence            6655554321         1234456678888999999999999999976 999999998766431       1234456


Q ss_pred             HHHHHHHHHHhcCeEeecCCCCCCC---CeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          363 DIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       363 ~~~~~~~ll~~~gv~v~~g~~~~~~---~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      +.-.+.+||+..||.++||++||..   =|+|.++-...  + +.+++++++-.++..+
T Consensus       418 D~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f~~~  473 (475)
T KOG0258|consen  418 DEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEFMDE  473 (475)
T ss_pred             cHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHHHHh
Confidence            7778999999999999999999973   26898885544  4 7888888887776543

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=100.00  E-value=7.3e-35  Score=278.33  Aligned_cols=344  Identities=17%  Similarity=0.139  Sum_probs=253.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCChH---HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAV---EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      .|.++|+|+.|+|..  ++++++   ++.+++.+++..+. ..|++..|.++||+++++++.        .+++++|+|+
T Consensus        34 ~g~~~~~L~~g~p~~--D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~gg  102 (460)
T PRK13238         34 AGYNPFLLKSEDVFI--DLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQG  102 (460)
T ss_pred             cCCCEEeCCCCCCCC--CCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhC--------CCcEEECCCH
Confidence            488999999999842  344444   67788878776554 489999999999999999983        3579999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC------CCcc--cChHHHHHhhcC----CccEE
Q 014769          117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE------RNWE--VDLDAVEALADK----NTAAM  184 (419)
Q Consensus       117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~~--~~~~~l~~~~~~----~~~~v  184 (419)
                      ++++..++.++++||| |++++|.|..+...+...|..++.+++++.      ++|.  +|++.|++.+++    +++++
T Consensus       103 t~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~I  181 (460)
T PRK13238        103 RAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFI  181 (460)
T ss_pred             HHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEE
Confidence            9999999999999999 999999999999889999999999988642      3444  999999999874    68899


Q ss_pred             EEeCCCCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccc--cccCC-----CCCCCccccCCCCcEEEEecCCCcCCC
Q 014769          185 VIINPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGH--LTFGS-----IPYTPMGLFGSIVPVITLGSISKRWLV  256 (419)
Q Consensus       185 ~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~~~~~-----~~~~~~~~~~~~~~~i~~~s~sK~~~~  256 (419)
                      ++++|+|||| .+++.+++++|.++|++||+++|+|+++..  ..|..     ....++..+     +..++|++|.+.+
T Consensus       182 vl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~~  256 (460)
T PRK13238        182 VMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLTM  256 (460)
T ss_pred             EEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEEE
Confidence            9999999997 999999999999999999999999997632  33321     111122111     1122233333333


Q ss_pred             CCce------eEEEEeeCCCCccchhhHHHHHHhhh----cc-c-cCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHH
Q 014769          257 PGWR------FGWLVTNDPNGIFQKSGIIDSIKDCL----SI-Y-SDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESA  323 (419)
Q Consensus       257 ~G~r------~G~~~~~~~~~~~~~~~~~~~l~~~~----~~-~-~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~  323 (419)
                      .|+|      .|++++++       +++++.++...    .+ + .+.+...|.|++..|.+.. .++++.+    .+++
T Consensus       257 Sg~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~  325 (460)
T PRK13238        257 SAKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQV  325 (460)
T ss_pred             ecccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHH
Confidence            3333      25666553       25777776652    11 2 2334455777777665422 3444443    3357


Q ss_pred             HHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc--c-CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------C
Q 014769          324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL--E-DINDDIEFALKLAKEESVIVTPGIYVGL-------------K  387 (419)
Q Consensus       324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~--~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------~  387 (419)
                      +++.+.|.+. |+.+ ..|.+|+|+++++.....  + ...++.+++.+|+++.||.+.|++.|..             .
T Consensus       326 ~~l~~~L~~~-G~~~-~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~  403 (460)
T PRK13238        326 EYLGEGLEEA-GVPI-QTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPA  403 (460)
T ss_pred             HHHHHHHHHC-CCCe-EccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCcc
Confidence            8888999887 8884 489999999998854210  0 0113688999999999999999987753             2


Q ss_pred             CeEEEEeec---CHHHHHHHHHHHHHHHH
Q 014769          388 NWLRIAFCA---EPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       388 ~~~Ris~~~---~~~~l~~~l~~l~~~~~  413 (419)
                      ..+|+++..   +.+.++.+.++|..+.+
T Consensus       404 ~~~Rla~~rr~~~~~~~~~~~~~l~~~~~  432 (460)
T PRK13238        404 ELLRLAIPRRVYTQSHMDYVAEALKAVKE  432 (460)
T ss_pred             ceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence            689999964   89999999999998764

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-33  Score=247.76  Aligned_cols=368  Identities=21%  Similarity=0.214  Sum_probs=277.1

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD   95 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   95 (419)
                      +..++.++|..+.+.+.    +.+.+++|||++|.-. .....|.-+.|.+|-+..+.......|.+..|.+++++.+++
T Consensus         5 i~~~p~DpIlgL~e~f~----~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~   80 (396)
T COG1448           5 IEAAPADPILGLKEAFK----ADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQK   80 (396)
T ss_pred             cccCCCCchhHHHHHHh----cCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHH
Confidence            34567788888887544    4568899999999321 123456677887777666666667799999999999999999


Q ss_pred             HHHhhCCCC---CCCCcE--EEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc
Q 014769           96 YLSRDLPYK---LSADDV--YVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV  168 (419)
Q Consensus        96 ~l~~~~~~~---~~~~~i--~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  168 (419)
                      .+   +|..   +..++|  +-|.|||.||......+..  +..+|++++|+|+.+..++...|+++..|+.....+..+
T Consensus        81 ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~  157 (396)
T COG1448          81 LL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGL  157 (396)
T ss_pred             Hh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccc
Confidence            99   4433   445555  6699999999999988854  567899999999999999999999999999876666779


Q ss_pred             ChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC-CCCcccc-CCCCc
Q 014769          169 DLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP-YTPMGLF-GSIVP  243 (419)
Q Consensus       169 ~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~-~~~~~  243 (419)
                      |.+.+...+..   +..+++-.++|||||..++.++|++|+++.++.+.+.++|-+|.+|.-+.+. ...+..+ .....
T Consensus       158 df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~  237 (396)
T COG1448         158 DFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPE  237 (396)
T ss_pred             cHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCc
Confidence            99988776654   2333344456999999999999999999999999999999999997654221 1111111 12223


Q ss_pred             EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc-----hHHHHHHHH
Q 014769          244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK-----EDFFCKLID  317 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~  317 (419)
                      ++++.|+||.|++.|.|+|.+.+-.++.... ..+...+... +...++|+......++.+|....     ...+..+++
T Consensus       238 ~lva~S~SKnfgLYgERVGa~~vva~~~~~a-~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~  316 (396)
T COG1448         238 LLVASSFSKNFGLYGERVGALSVVAEDAEEA-DRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQ  316 (396)
T ss_pred             EEEEehhhhhhhhhhhccceeEEEeCCHHHH-HHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            7999999999999999999976544321110 0222333333 34567788888888889998743     234677889


Q ss_pred             HHHHHHHHHHHHhhcC-C--CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe
Q 014769          318 TLRESAEICYDGVKEI-P--CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF  394 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~-~--~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~  394 (419)
                      ++.++|..+.+.|++. +  .+. +...+.|||.+..+.          .+.+.+|.++++|++..+.        |||+
T Consensus       317 Ri~~mR~~lv~~L~~~~~~~~f~-~i~~Q~GMFsy~Gls----------~~QV~rLree~~IY~v~sG--------Ri~v  377 (396)
T COG1448         317 RILEMRQALVDALKALGAPRNFD-FIISQRGMFSYTGLS----------PEQVDRLREEFGIYLVASG--------RINV  377 (396)
T ss_pred             HHHHHHHHHHHHHHhhCCCcccc-hHhhcCceeecCCCC----------HHHHHHHHHhccEEEecCC--------eeee
Confidence            9999999999999973 2  365 447788999987653          3456788899999987654        9999


Q ss_pred             -ecCHHHHHHHHHHHHHH
Q 014769          395 -CAEPSALKDGLGRMKAF  411 (419)
Q Consensus       395 -~~~~~~l~~~l~~l~~~  411 (419)
                       +.++.+++.+.+.|.++
T Consensus       378 aGl~~~ni~~va~ai~~v  395 (396)
T COG1448         378 AGLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             ccCChhhHHHHHHHHHhh
Confidence             68999999999988875

>PLN02822 serine palmitoyltransferase

Probab=100.00  E-value=9.4e-33  Score=266.27  Aligned_cols=349  Identities=15%  Similarity=0.143  Sum_probs=253.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CC-----CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      .|+++|||+.|++   +.+..+|.+++++.++++. +.     ...|++..+..+|+++|++++.       .++.|+++
T Consensus       107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s  176 (481)
T PLN02822        107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS  176 (481)
T ss_pred             CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            4788999999974   3566799999999999876 21     1246666778999999999983       35788888


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh--cCCc-cEEEEeCCC
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA--DKNT-AAMVIINPG  190 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~-~~v~i~~p~  190 (419)
                      +|.+ ++..++.+++++||.|++....|..+...+...+.+++++++.+.+++..+++.++...  .+++ +++++..++
T Consensus       177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~  255 (481)
T PLN02822        177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY  255 (481)
T ss_pred             CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence            8877 57889999999999999888877777777788888888887542222222233332221  1234 566777778


Q ss_pred             CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      |++|.+.|   +++|.++|++||+++|+||+|+.+.++..+  ......+......++++||||.+++.|   ||+++++
T Consensus       256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~  329 (481)
T PLN02822        256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSA  329 (481)
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCH
Confidence            99999999   899999999999999999999977776322  111111222245688999999998888   9999865


Q ss_pred             CCCccchhhHHHHHHhhh-ccccCC--chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769          269 PNGIFQKSGIIDSIKDCL-SIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS  345 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  345 (419)
                              ++++.++... .+.++.  ++..+.++.++|+..  +...+..++++++++.+++.|++.+++. +..+.++
T Consensus       330 --------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~s  398 (481)
T PLN02822        330 --------RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGLS-IGSNTLS  398 (481)
T ss_pred             --------HHHHHHHhcCCceeeccccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCC
Confidence                    5777776443 223333  355667776777542  2235678899999999999999877877 4466788


Q ss_pred             EEEEeecCcccccCCC-C---HHHHHHHHHHhcCeEeecCCC--CCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769          346 MVTMVKLNPWLLEDIN-D---DIEFALKLAKEESVIVTPGIY--VGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~-~---~~~~~~~ll~~~gv~v~~g~~--~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                      +++++.++...- ... +   ..+++.+|++++||.+.|+.+  |+.   +.++|++++  .++++|++++++|++++.+
T Consensus       399 pi~~l~l~~~~~-~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~  477 (481)
T PLN02822        399 PIVFLHLEKSTG-SAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS  477 (481)
T ss_pred             CEEEEEeCCCcc-cccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence            888888863200 000 1   357888888788999998743  321   457999874  7999999999999999988


Q ss_pred             Hhc
Q 014769          415 HTK  417 (419)
Q Consensus       415 ~~~  417 (419)
                      ..+
T Consensus       478 ~~~  480 (481)
T PLN02822        478 VLK  480 (481)
T ss_pred             Hhc
Confidence            754

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=100.00  E-value=2.8e-32  Score=252.44  Aligned_cols=306  Identities=15%  Similarity=0.159  Sum_probs=224.9

Q ss_pred             CCCChHHHHHHHHHHHhCCCCCCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769           57 CFRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL  135 (419)
Q Consensus        57 ~~~~~~~v~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl  135 (419)
                      .+..+|.++++..++++.     |+ ...-..+|++.+|+++      +.+++++++++|+++++..++.++.++||.|+
T Consensus        31 gl~~~~~~~~~~~~~~~~-----~~g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vl   99 (346)
T TIGR03576        31 GLAGGFKIDEEDLELLET-----YVGPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKVV   99 (346)
T ss_pred             cCCCChhHHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEEE
Confidence            355678888888888754     31 2223455666666665      45789999999999999999999999999999


Q ss_pred             ee---CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769          136 LP---RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL  212 (419)
Q Consensus       136 v~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  212 (419)
                      ++   .|+|..+...++..|.++..+         .+++.++. . +++++|++ ++++|+|.+++.+++++|+++|+++
T Consensus       100 i~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~  167 (346)
T TIGR03576       100 HYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-DGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSK  167 (346)
T ss_pred             ECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-cCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHc
Confidence            75   478888888889889875322         13444432 2 35666666 5679999999999999999999999


Q ss_pred             CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccC
Q 014769          213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSD  291 (419)
Q Consensus       213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~  291 (419)
                      |+++|+||+|+.+..+.....+...++.   .++++||||.  ++|+|+||++++.        ++++.++.... +..+
T Consensus       168 ~~~livDEAy~~~~~~~~~~~~~~~~~~---divv~s~SKa--laG~r~G~v~~~~--------~li~~l~~~~~~~~~s  234 (346)
T TIGR03576       168 EAIVLVDDASGARVRRLYGQPPALDLGA---DLVVTSTDKL--MDGPRGGLLAGRK--------ELVDKIKSVGEQFGLE  234 (346)
T ss_pred             CCEEEEECCccccccccCCCCCHHHcCC---cEEEeccchh--ccccceEEEEeCH--------HHHHHHHHhhcCcccC
Confidence            9999999999986532111112222222   2677899994  7899999999875        68888887653 3344


Q ss_pred             CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHH
Q 014769          292 IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLA  371 (419)
Q Consensus       292 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll  371 (419)
                      .+++.|.++..+|+...   .+..+..++++++.+.+.++.+   . + .|..+.|+|++++..      ++.+++.+++
T Consensus       235 ~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~~~~f~~~~~~~~------~~~~~~~~ll  300 (346)
T TIGR03576       235 AQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL---N-V-ERTPTGFVIKGVEEE------KLIEIGLDLL  300 (346)
T ss_pred             ccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC---C-C-CcCCCeEEEEeCCCC------CHHHHHHHHH
Confidence            67888888888887522   3456778888888888877643   3 3 233444899988631      3567888999


Q ss_pred             HhcCeEeecCCCCC-CCCeEEEEeecCHH---HHHHHHHHHHHHH
Q 014769          372 KEESVIVTPGIYVG-LKNWLRIAFCAEPS---ALKDGLGRMKAFC  412 (419)
Q Consensus       372 ~~~gv~v~~g~~~~-~~~~~Ris~~~~~~---~l~~~l~~l~~~~  412 (419)
                      +++||.+.||+.|. .++|+||+++.+++   +.+.+++.|++.+
T Consensus       301 ~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       301 RNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             HhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence            99999999998884 47899999998765   7888888887654

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=100.00  E-value=2.9e-31  Score=253.24  Aligned_cols=333  Identities=14%  Similarity=0.120  Sum_probs=242.2

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-CCCCC-------CCCHHHHHHHHHHHHhhCCCCC-CCCcEEE
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-CYATN-------SGIPPARRAIADYLSRDLPYKL-SADDVYV  112 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~~-------~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~  112 (419)
                      ++.|-|..+.-+     ++++.+.+++.+.+.....+ .+...       ..+.++|+.+++++      +. ++++|++
T Consensus        15 ~~~iyld~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~   83 (398)
T TIGR03392        15 DGTVYLDSAATA-----LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL------NAPDAENIVW   83 (398)
T ss_pred             CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEE
Confidence            357888888632     46788889988876532111 12211       23456888999988      45 4789999


Q ss_pred             cccHHHHHHHHHHHh----cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          113 TLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       113 t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      |+|++++++.++.++    .++||+|++++|+|++    +...++..|.+++.++++.  ++.+|++.++++++++++++
T Consensus        84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv  161 (398)
T TIGR03392        84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL  161 (398)
T ss_pred             eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence            999999999999988    4789999999999976    3456678899999998753  35689999999998889999


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      ++++|+||||.++|   +++|.++|+++|+++++|++|+...+    ...+..++.   .+++.|++|.++.+|  +||+
T Consensus       162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l  229 (398)
T TIGR03392       162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDI---DFYAFSGHKLYGPTG--IGVL  229 (398)
T ss_pred             EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCC---CEEEEecccccCCCc--eEEE
Confidence            99999999999999   88899999999999999999975332    122222332   377788999876666  8999


Q ss_pred             EeeCCCCccchhhHHHHHHhhh---------------------c-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769          265 VTNDPNGIFQKSGIIDSIKDCL---------------------S-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES  322 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~~---------------------~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  322 (419)
                      ++++        ++++.+....                     . ..++++.....++..+++.......++..++.++.
T Consensus       230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l  301 (398)
T TIGR03392       230 YGKT--------ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSL  301 (398)
T ss_pred             EEcH--------HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            8865        3444332111                     0 12355665666666666543334455677888888


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCeEEEEe
Q 014769          323 AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNWLRIAF  394 (419)
Q Consensus       323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~~Ris~  394 (419)
                      ++.+.+.|++++++.....+. +.++++.++.      .+..++...| .++||.+.+|..+.        .++++|+|+
T Consensus       302 ~~~l~~~l~~l~g~~~~~~~~-~~i~~~~~~~------~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~  373 (398)
T TIGR03392       302 ADLAEERLAQLPGFRSFRCPG-SSLLAFDFAG------VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASF  373 (398)
T ss_pred             HHHHHHHHhcCCCeEEeCCCC-CcEEEEEeCC------cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEe
Confidence            999999998888876332343 4455555552      1456676665 67899999988653        357999999


Q ss_pred             e--cCHHHHHHHHHHHHHHHHHH
Q 014769          395 C--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       395 ~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +  .+++|++.+++.|+++++++
T Consensus       374 ~~~~t~~ei~~l~~~l~~~~~~~  396 (398)
T TIGR03392       374 APYNTQQDVDALVDAVGAALELL  396 (398)
T ss_pred             eccCCHHHHHHHHHHHHHHHHHh
Confidence            4  68999999999999988764

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=100.00  E-value=4.8e-31  Score=251.95  Aligned_cols=333  Identities=15%  Similarity=0.121  Sum_probs=243.2

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC--CCCC------CCCCHHHHHHHHHHHHhhCCCCC-CCCcEEE
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN--CYAT------NSGIPPARRAIADYLSRDLPYKL-SADDVYV  112 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~------~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~  112 (419)
                      .+.+.|..+..+     +.++.+.+++.+.+.....+  ....      ...+.++|+.+++++      +. ++++|++
T Consensus        18 ~~~~yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~   86 (401)
T PRK10874         18 DAGVYLDSAATA-----LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW   86 (401)
T ss_pred             CceEEEeCCccc-----CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence            457888888632     46778889998877542110  0000      122567888888887      55 6889999


Q ss_pred             cccHHHHHHHHHHHhc----CCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          113 TLGCKQAVEVILSVLA----RPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       113 t~g~~~al~~~~~~l~----~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      |+|++++++.++.++.    ++||+|++++|+|++    +...++..|.+++.++++.  ++.+|++++++.++++++++
T Consensus        87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv  164 (401)
T PRK10874         87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL  164 (401)
T ss_pred             ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence            9999999999999983    689999999999875    4455677899999988753  45789999999998899999


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      ++++|+||||.++|   +++|.++|+++|+++|+|++|+...+    ...+..++   ..+++.|++|.++.+|  +||+
T Consensus       165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l  232 (401)
T PRK10874        165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQALD---IDFYAFSGHKLYGPTG--IGVL  232 (401)
T ss_pred             EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchhcC---CCEEEEecccccCCCc--cEEE
Confidence            99999999999999   88999999999999999999975332    12222332   3377889999877666  6998


Q ss_pred             EeeCCCCccchhhHHHHHHhhh----------------------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769          265 VTNDPNGIFQKSGIIDSIKDCL----------------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES  322 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  322 (419)
                      ++++        ++++.+....                      ...++++...+.++..+++........+..++.++.
T Consensus       233 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l  304 (401)
T PRK10874        233 YGKS--------ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSL  304 (401)
T ss_pred             EEch--------HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            8765        3444332111                      012355666777777777653334455567788888


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCeEEEEe
Q 014769          323 AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNWLRIAF  394 (419)
Q Consensus       323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~~Ris~  394 (419)
                      ++.+.+.|+++|++..+..+. +.++++.++.      .+..++...| .++||.+.+|..+.        ..+++|+|+
T Consensus       305 ~~~l~~~l~~~~g~~~~~~~~-~~i~~~~~~~------~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~  376 (401)
T PRK10874        305 ATLAEDALAKLPGFRSFRCQD-SSLLAFDFAG------VHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASF  376 (401)
T ss_pred             HHHHHHHHhcCCCEEEeCCCC-CcEEEEEECC------cCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEe
Confidence            999999999888887442344 4455556653      1356666555 77899999988653        368999999


Q ss_pred             e--cCHHHHHHHHHHHHHHHHHH
Q 014769          395 C--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       395 ~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +  .++++++.+++.|++++.++
T Consensus       377 ~~~nt~edid~ll~al~~~~~~~  399 (401)
T PRK10874        377 APYNTQSDVDALVNAVDRALELL  399 (401)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHh
Confidence            5  58999999999999988764

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=100.00  E-value=6.5e-31  Score=250.67  Aligned_cols=331  Identities=16%  Similarity=0.167  Sum_probs=237.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCC---CC----HHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNS---GI----PPARRAIADYLSRDLPYKLSADDVYV  112 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~l~~~~~~~~~~~~i~~  112 (419)
                      +|.++|||+.|++   +.++.+|.+++++.+++..... .|+++.   |.    .++|+++++++.        .+++++
T Consensus        36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~~-~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii  103 (393)
T TIGR01822        36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHGF-GMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL  103 (393)
T ss_pred             CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhCC-CCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence            4788999999984   4577889999999998875322 566555   76    788999999883        257788


Q ss_pred             cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEE
Q 014769          113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVI  186 (419)
Q Consensus       113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i  186 (419)
                      ++|+++++..++.+++++||.|++++|.|+++...+...+.....+.       ..|++.+++++++      ++++|++
T Consensus       104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~  176 (393)
T TIGR01822       104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT  176 (393)
T ss_pred             ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence            88999999999999999999999999999998887777776654432       2688888887764      5677777


Q ss_pred             eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--CCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      .+++||||.+.+   +++|+++|+++|+++|+|++|+...++...  ........ .+..++++|+||.+  +|+|+||+
T Consensus       177 ~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~~  250 (393)
T TIGR01822       177 DGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGFT  250 (393)
T ss_pred             eCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEEE
Confidence            788999999988   899999999999999999999754332211  11111111 13458899999984  57899999


Q ss_pred             EeeCCCCccchhhHHHHHHhhh-c--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769          265 VTNDPNGIFQKSGIIDSIKDCL-S--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK  341 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  341 (419)
                      +++.        ++++.++... .  .+.+.++..+.++.++++..  +..++.+++++++++.+.+.|++. ++.+. .
T Consensus       251 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~  318 (393)
T TIGR01822       251 TARK--------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-P  318 (393)
T ss_pred             EeCH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-C
Confidence            8865        5777666532 2  22233444445555555432  234567788999999999999876 77633 4


Q ss_pred             CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----LKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       342 p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +.+. ++.+.++..     .+..+++..|++ +||.+. +..|.    ....+|++++  .++++|++++++|+++++++
T Consensus       319 ~~~~-~~~i~~~~~-----~~~~~l~~~L~~-~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~  390 (393)
T TIGR01822       319 ADHP-IIPVMLYDA-----VLAQRFARRLLE-EGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL  390 (393)
T ss_pred             CCCC-EEEEEeCCH-----HHHHHHHHHHHH-CCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            4444 444444321     135677777755 599987 44442    1246999884  58999999999999987754

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=6.4e-31  Score=248.11  Aligned_cols=327  Identities=15%  Similarity=0.136  Sum_probs=233.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCC----CHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSG----IPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      .|.++|||+.|+|   ..++.+|.+++++.++++....  ..|....|    ..++++++++++.       .++.|+++
T Consensus        14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~   83 (360)
T TIGR00858        14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS   83 (360)
T ss_pred             CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            4889999999964   1345678999999998864211  12222233    3457777777762       25677777


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCC
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINP  189 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p  189 (419)
                      +|+.+ +..++.+++++||.|+++.|+|..+...+...|.++..++.       +|++.+++.++.    +++++++.++
T Consensus        84 ~G~~~-~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~  155 (360)
T TIGR00858        84 SGYLA-NVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV  155 (360)
T ss_pred             chHHH-HHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence            77544 55577888899999999999999998888888988877652       478888887754    3567777888


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC--CCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY--TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      +||||...+   +++|.++|+++++++|+||+|..+.++....  .....+..++++++++|+||.++++|   ||++++
T Consensus       156 ~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~  229 (360)
T TIGR00858       156 FSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS  229 (360)
T ss_pred             ccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence            999999888   8999999999999999999998765543221  22222333467899999999988776   999876


Q ss_pred             CCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      .        ++++.+.....   ...+.++..+.++.++++..  ....+.+++++++++.+.+.|+++ ++. + .+.+
T Consensus       230 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~  296 (360)
T TIGR00858       230 Q--------ALIDYLINRARTLIFSTALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFT-L-MPSC  296 (360)
T ss_pred             H--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCc-c-CCCC
Confidence            4        56666654321   12234444455555666532  223566789999999999999987 666 4 3556


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMK  409 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~  409 (419)
                      +.++|+.++..     .+..++..+| .++||.+.++..++.   .+++|++++  .+++++++++++|+
T Consensus       297 ~~~~~~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       297 TPIVPVIIGDN-----ASALALAEEL-QQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHH-HHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence            77888887631     1356777777 567999998766542   468999996  48999999998874

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=100.00  E-value=1e-30  Score=249.99  Aligned_cols=337  Identities=16%  Similarity=0.107  Sum_probs=238.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      +|.++|||+.|++   +.++.++.+.+++.+.+.....  ..|....|..++++.+++++.+.+|.   +++|++|+| +
T Consensus        40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~  112 (397)
T PRK06939         40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F  112 (397)
T ss_pred             CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence            5888999999973   3567789999999988865322  12333568889999999999887773   367888887 7


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCC
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGN  191 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n  191 (419)
                      +++..++.+++++||.|++++|+|+.+...+...+.++..++.       .|++.+++.+++      ++++++..+..|
T Consensus       113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~  185 (397)
T PRK06939        113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS  185 (397)
T ss_pred             HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence            7888999999999999999999999998888888888776643       367777776653      455556556689


Q ss_pred             ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC--CCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769          192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG--SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP  269 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  269 (419)
                      ++|...+   +++|.++|+++++++|+||+|+...+.  +........+. ...+++++|+||.+  .|+|+||++++. 
T Consensus       186 ~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~--~g~r~G~v~~~~-  258 (397)
T PRK06939        186 MDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKAL--GGASGGYTAGRK-  258 (397)
T ss_pred             CCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHh--CccCceEEEeCH-
Confidence            9998766   899999999999999999999643222  21111111121 12468999999996  356899999865 


Q ss_pred             CCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 014769          270 NGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM  346 (419)
Q Consensus       270 ~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  346 (419)
                             ++++.++....   ...+.++..+.++.++++..  ....+.+++++++++.+.+.|+++ ++. ...+.+++
T Consensus       259 -------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~  327 (397)
T PRK06939        259 -------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELL--EESDELRDRLWENARYFREGMTAA-GFT-LGPGEHPI  327 (397)
T ss_pred             -------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCCCCE
Confidence                   57777765321   12233344445554555432  123467788899999999999887 666 33455565


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +. +.++..     .++.+++..|+++ ||.+.++.+..   ..+++|++++  .+++++++++++|++++++.
T Consensus       328 ~~-~~~~~~-----~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        328 IP-VMLGDA-----KLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             EE-EEECCH-----HHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            43 334321     1356788887665 99998654321   1368999983  68999999999999998764

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=100.00  E-value=1.7e-30  Score=244.74  Aligned_cols=346  Identities=18%  Similarity=0.181  Sum_probs=249.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCCh---HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTA---VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~---~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      .|-+++.|..+++..+  +..+   .++.++...++..++. .|+++.|.++|++++++++.        .+++++|+|+
T Consensus         9 ~g~n~~~l~~~~v~iD--lltds~t~ams~~~~~a~~~gd~-~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~G   77 (431)
T cd00617           9 AGYNVFLLRSEDVYID--LLTDSGTGAMSDYQWAAMMLGDE-AYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQG   77 (431)
T ss_pred             cCCCEEeCCCCCcCCC--CCCCCCcHHHHHHHHHHHHhCCC-ccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCH
Confidence            4999999999998443  3333   3565666666665553 69999999999999999983        3689999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC--------cccChHHHHHhhcCC----ccEE
Q 014769          117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN--------WEVDLDAVEALADKN----TAAM  184 (419)
Q Consensus       117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~----~~~v  184 (419)
                      ++|+..++.++++|||.| +++|.|..+...+...|..++.+++++..+        +.+|++.|+++++++    +++|
T Consensus        78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I  156 (431)
T cd00617          78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI  156 (431)
T ss_pred             HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence            999999999999999987 689999999888999999999999875432        449999999999865    6788


Q ss_pred             EEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEccccccc--cc-----CCCCCCCccccCCCCcEEEEecCCCcCCC
Q 014769          185 VIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHL--TF-----GSIPYTPMGLFGSIVPVITLGSISKRWLV  256 (419)
Q Consensus       185 ~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  256 (419)
                      +++.|+||+ |+.++.+++++|.++|+++|+++|+|+++...  .+     ++....++..     .++.++|++|.+.+
T Consensus       157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e-----i~~e~~s~sd~~~m  231 (431)
T cd00617         157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE-----IAREMFSYADGCTM  231 (431)
T ss_pred             EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH-----HHHHhhccCCEEEE
Confidence            999999998 99999999999999999999999999995431  22     1111122211     12345566666666


Q ss_pred             CCce------eEEEEeeCCCCccchhhHHHHHHhhh----cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769          257 PGWR------FGWLVTNDPNGIFQKSGIIDSIKDCL----SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE  324 (419)
Q Consensus       257 ~G~r------~G~~~~~~~~~~~~~~~~~~~l~~~~----~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  324 (419)
                      .|+|      .||++++++       +++++++...    ..  .++.+.-...+++..|++...  .+...+++ ++++
T Consensus       232 S~~K~~~~~~GG~i~~~d~-------~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~-~~r~  301 (431)
T cd00617         232 SAKKDGLVNIGGFLALRDD-------ELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRV-EQVR  301 (431)
T ss_pred             EeecCCCCccceEEEeCcH-------HHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHH-HHHH
Confidence            6665      568888652       4777777532    11  122233333444445654211  22223333 3558


Q ss_pred             HHHHHhhcCCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeec-CCCC-CC-----------CC
Q 014769          325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTP-GIYV-GL-----------KN  388 (419)
Q Consensus       325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~-g~~~-~~-----------~~  388 (419)
                      ++.+.|.+. |+. +..|.+|+++|++.+....   ....++.+++.+|+++.||.+.- |+.. +.           -.
T Consensus       302 ~l~~~L~~~-G~~-v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~  379 (431)
T cd00617         302 YLGDRLDEA-GVP-IVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELE  379 (431)
T ss_pred             HHHHHHHHC-CCC-ccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccc
Confidence            888999988 888 4489999999998864210   01125789999999999999653 4311 10           25


Q ss_pred             eEEEEe---ecCHHHHHHHHHHHHHHHHH
Q 014769          389 WLRIAF---CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       389 ~~Ris~---~~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+||++   ..+.+.++.+.+.|..+.++
T Consensus       380 ~~rl~~prr~~t~~~~~~~~~~~~~~~~~  408 (431)
T cd00617         380 LVRLAIPRRVYTQDHMDYVAAAVIALYER  408 (431)
T ss_pred             eeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence            799999   45899999999999988865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=100.00  E-value=6.6e-30  Score=243.17  Aligned_cols=335  Identities=16%  Similarity=0.180  Sum_probs=240.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .|+++|||+.|++   +.++.+|.+.+++.+++...  ....|....|..++++.+++++.+..|.   ++.+++++| +
T Consensus        31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~  103 (385)
T TIGR01825        31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-F  103 (385)
T ss_pred             CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-H
Confidence            4889999999863   35677889999999887642  2346777889999999999999887773   356777777 5


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCCCCcc
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPC  193 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~npt  193 (419)
                      +++..++.+++++||.|+++.|+|..+...+...|.++..++       .+|++.+++.+.+    +++++++.+++|||
T Consensus       104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~t  176 (385)
T TIGR01825       104 NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMD  176 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCC
Confidence            667788888899999999999999988777777777765543       3577777776543    56677777789999


Q ss_pred             ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc--cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM--GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      |.+.+   +++|.++|+++|+++|+||+|+.+.++.......  ..+. .+.++++.||||.++++|   ||++++.   
T Consensus       177 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~---  246 (385)
T TIGR01825       177 GDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK---  246 (385)
T ss_pred             CCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH---
Confidence            99998   8899999999999999999998765542111111  1222 346789999999987666   9988754   


Q ss_pred             ccchhhHHHHHHhhhc-c--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769          272 IFQKSGIIDSIKDCLS-I--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT  348 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~~-~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  348 (419)
                           ++++.+..... +  +...+++.+.++.++++....  ..+..++++++++.+.+.|+++ ++. +..|.+. ++
T Consensus       247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~-~~  316 (385)
T TIGR01825       247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYD-TGGSETP-IT  316 (385)
T ss_pred             -----HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCCC-EE
Confidence                 56777765421 1  223455667777776654211  1245667778889999999887 777 3355554 44


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .+.++..     .+..+++..|+++ ||.+. +..|..    ..++|+++  ..+++++++++++|+++++++
T Consensus       317 ~~~~~~~-----~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~  382 (385)
T TIGR01825       317 PVVIGDE-----KAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL  382 (385)
T ss_pred             EEEECCH-----HHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence            4444321     1346777787665 99884 443432    36899987  479999999999999998754

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=2.9e-30  Score=246.42  Aligned_cols=342  Identities=13%  Similarity=0.101  Sum_probs=236.5

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..|.+... ..+.+|.+.+++.+++.....   ....+..++++.+++++.+..+    .+++++++|+++
T Consensus        36 ~dg~~~iD~~~g~~~~~-lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~e  107 (396)
T PRK02627         36 DDGKEYLDFLAGIAVNN-LGHCHPKLVEAIQEQAAKLIH---TSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAE  107 (396)
T ss_pred             CCCCEEEECCccHHhcc-CCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHH
Confidence            35888999999866532 122368999999998865321   1112335788888888877533    479999999999


Q ss_pred             HHHHHHHHhcCCC-------CeEEeeCCCCCCcHHHHhhcCCEEE-EEeccC-CCCc----ccChHHHHHhhcCCccEEE
Q 014769          119 AVEVILSVLARPG-------ANVLLPRPGWPYYEGIAQRKQVEVR-HFDLLP-ERNW----EVDLDAVEALADKNTAAMV  185 (419)
Q Consensus       119 al~~~~~~l~~~g-------d~vlv~~p~~~~~~~~~~~~g~~~~-~~~~~~-~~~~----~~~~~~l~~~~~~~~~~v~  185 (419)
                      |+..+++.++..+       ++|++..++|+++.......+.... .....+ ..++    ..|++.+++++.+++++++
T Consensus       108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vi  187 (396)
T PRK02627        108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVM  187 (396)
T ss_pred             HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEE
Confidence            9999999776433       6799999999987655444332211 101111 0111    1288999999987788888


Q ss_pred             EeCCCCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          186 IINPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       186 i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      +..++||+| ..++.+++++|.++|+++|+++|+||+|.++.+.+.. ..+...+..+++   .||||.++ +|+|+||+
T Consensus       188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~rig~~  262 (396)
T PRK02627        188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPDI---MTLAKGLG-GGVPIGAV  262 (396)
T ss_pred             EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCCE---EEEcchhh-CCcccEEE
Confidence            888899999 6889999999999999999999999999987665532 222222222233   37999987 89999999


Q ss_pred             EeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          265 VTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ++++        ++++.+... ...+++.+++.|.++.++++.... +..++.++.....++.+.+.+.+++.+. . .+
T Consensus       263 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~  332 (396)
T PRK02627        263 LAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIK-E-VR  332 (396)
T ss_pred             EEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCee-e-ec
Confidence            9875        566666543 233567788999998888875322 2233333333333333443333343332 1 23


Q ss_pred             CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ..|.++|++++.       +..+++.++++ +||.+.|+.    .+++|+++  ..+++++++++++|+++++++
T Consensus       333 ~~g~~~~i~~~~-------~~~~~~~~l~~-~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~  395 (396)
T PRK02627        333 GLGLMIGIELDR-------PAAEIVKKALE-KGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL  395 (396)
T ss_pred             cCcEEEEEEecC-------cHHHHHHHHHH-CCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence            457888988742       46778888765 499999864    47899987  568999999999999998765

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=100.00  E-value=2.7e-30  Score=246.08  Aligned_cols=334  Identities=17%  Similarity=0.144  Sum_probs=229.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .|+++|||+.|++   +.++++|.+++++.+++....  ...|....|...+++.+++.+.+.++   .+ +.+++++++
T Consensus        37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~-~~i~~~~g~  109 (385)
T PRK05958         37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AE-RALLFSSGY  109 (385)
T ss_pred             CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CC-cEEEECcHH
Confidence            6899999999963   234567899999999886421  11233333444444444444444444   23 444445556


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC---ccEEEEeCCCCccc
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN---TAAMVIINPGNPCG  194 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG  194 (419)
                      +++..++..++++||.|++++|+|+.+...+...|.++..++.       .|++.+++.+++.   +.++++.+++||||
T Consensus       110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G  182 (385)
T PRK05958        110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG  182 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence            6777777888999999999999999988888888888877653       3778888887642   34445556789999


Q ss_pred             cCCCHHHHHHHHHHHHhCCCeEEEcccccccccC--CCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc
Q 014769          195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG--SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI  272 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  272 (419)
                      ...+   +++|.++|+++|+++|+||+|+.+.++  +........+...++++++.|+||.++.+|   ||++++.    
T Consensus       183 ~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~----  252 (385)
T PRK05958        183 DLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSE----  252 (385)
T ss_pred             CcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCH----
Confidence            9888   899999999999999999999865543  222211112333456899999999987777   8988754    


Q ss_pred             cchhhHHHHHHhhh-c--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 014769          273 FQKSGIIDSIKDCL-S--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTM  349 (419)
Q Consensus       273 ~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~  349 (419)
                          ++.+.+.... .  .+.+.++....++..+++....  ..+..+++.++++.+.+.|+++ ++. +..|. |.+++
T Consensus       253 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~-~~~~~  323 (385)
T PRK05958        253 ----TLIDYLINRARPFIFTTALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRAL-GFQ-LMDSQ-SAIQP  323 (385)
T ss_pred             ----HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCC-CCEEE
Confidence                4666654332 1  1233455555555566654211  1456788889999999999887 666 43454 45667


Q ss_pred             eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          350 VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      +.++..     .++.++..+| .++||.+.++..+.   ..+++|++++  .+++++++++++|++++
T Consensus       324 ~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~  385 (385)
T PRK05958        324 LIVGDN-----ERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL  385 (385)
T ss_pred             EEeCCH-----HHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence            777531     1356777777 56799998865443   2468999996  58999999999998753

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=100.00  E-value=8.6e-30  Score=243.67  Aligned_cols=334  Identities=15%  Similarity=0.180  Sum_probs=240.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC----CC----CCCCCHHHHHHHHHHHHhhCCCCCC-CCcEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC----YA----TNSGIPPARRAIADYLSRDLPYKLS-ADDVY  111 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~----Y~----~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~  111 (419)
                      +.+++-|+.|..+     ++++.+.+++.+.+.....+.    +.    ...++.++|+.+++++      +.+ +++|+
T Consensus        16 ~~~~~yld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------~~~~~~~v~   84 (403)
T TIGR01979        16 GKPLVYLDSAATS-----QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI------NAASDEEIV   84 (403)
T ss_pred             CCceEEEeCcccc-----CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CcCCCCeEE
Confidence            6678999999743     456788888887765421110    10    0124568889999988      455 67999


Q ss_pred             EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCCc----HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYY----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      +|+|++++++.++.++    .++||+|+++++.|++.    ...+...|.+++.++++  .++.++++.+++++++++++
T Consensus        85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l  162 (403)
T TIGR01979        85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL  162 (403)
T ss_pred             EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence            9999999999998875    56899999999988763    34556779999988875  34568999999999888999


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      +++++|+||||..+|   +++|.++|+++|+++++|++|+...    ....+..++   ..+++.|++|.++.+|  +|+
T Consensus       163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~~~---~d~~~~s~~K~~gp~G--~g~  230 (403)
T TIGR01979       163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQALD---CDFYVFSGHKMYGPTG--IGV  230 (403)
T ss_pred             EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCccccC---CCEEEEecccccCCCC--ceE
Confidence            999999999999999   8899999999999999999997532    222232332   3488889999876566  899


Q ss_pred             EEeeCCCCccchhhHHHHHHhh---------------------h-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDC---------------------L-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~---------------------~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                      +++++        ++++.+...                     . ...++++.....++.++++.......++..++..+
T Consensus       231 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~  302 (403)
T TIGR01979       231 LYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE  302 (403)
T ss_pred             EEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            98864        233333211                     0 01134556666666666654323346677788888


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCC----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC--------CCCCCe
Q 014769          322 SAEICYDGVKEIPCISCPNKPE----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY--------VGLKNW  389 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--------~~~~~~  389 (419)
                      .++.+.+.|+++++++++ .|.    .+.++.+.++.      .+..++.. .|+++||.+.+|..        ++.+++
T Consensus       303 l~~~l~~~l~~~~g~~~~-~~~~~~~~~~~v~~~~~~------~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~  374 (403)
T TIGR01979       303 LTAYALERLGEIPGLRIY-GPRDAEDRGGIISFNVEG------VHPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPAT  374 (403)
T ss_pred             HHHHHHHHHhcCCCEEEe-CCCCccccCceEEEEeCC------cCHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCE
Confidence            999999999888787743 333    13344455653      13455654 55788999988763        344689


Q ss_pred             EEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          390 LRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       390 ~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +|+|++  .+++|++++++.|+++++.+
T Consensus       375 iRiS~~~~~t~~di~~l~~~l~~~~~~~  402 (403)
T TIGR01979       375 CRASFYIYNTEEDIDALVEALKKVRKFF  402 (403)
T ss_pred             EEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            999996  58899999999999877654

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=100.00  E-value=1e-29  Score=242.99  Aligned_cols=330  Identities=14%  Similarity=0.160  Sum_probs=238.9

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--------CCCCHHHHHHHHHHHHhhCCCCC-CCCcEEE
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--------NSGIPPARRAIADYLSRDLPYKL-SADDVYV  112 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~  112 (419)
                      .++|-|..+..     .+.++.+++++.+.+.....+....        ..-..++|+.+++++      +. ++++|++
T Consensus        22 ~~~iYld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~~   90 (406)
T PRK09295         22 LPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI------NARSAEELVF   90 (406)
T ss_pred             CceEEEeCccc-----ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CcCCCCeEEE
Confidence            35788888863     3567888899888775321111110        122457888888887      43 5789999


Q ss_pred             cccHHHHHHHHHHHh----cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          113 TLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       113 t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      |+|++++++.++.++    .++||+|++++++|++    +...++..|++++.+++++  ++.+|++.++++++++++++
T Consensus        91 t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv  168 (406)
T PRK09295         91 VRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLL  168 (406)
T ss_pred             eCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEE
Confidence            999999999998874    5789999999998864    3455677899999988753  45689999999998889999


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      ++++|+||||.++|   +++|.++|+++|+++++|++|+...    ...++..++.   .+++.|++|.++.+|  +||+
T Consensus       169 ~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l  236 (406)
T PRK09295        169 AITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQALDC---DFYVFSGHKLYGPTG--IGIL  236 (406)
T ss_pred             EEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchhcCC---CEEEeehhhccCCCC--cEEE
Confidence            99999999999999   8889999999999999999997632    2223333333   388889999876666  8999


Q ss_pred             EeeCCCCccchhhHHHHHHhh-----------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          265 VTNDPNGIFQKSGIIDSIKDC-----------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                      ++++.        +.+.+...                       ....++++.....++.++++.......++..++.++
T Consensus       237 ~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  308 (406)
T PRK09295        237 YVKEA--------LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQN  308 (406)
T ss_pred             EEchH--------hHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            88652        22222100                       011346777777777777766433456677788888


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCeEE
Q 014769          322 SAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNWLR  391 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~~R  391 (419)
                      ..+++.+.|++++++.++ .|.  .+ .+.+.++.      .+..++... |.++||.+..|..+.        .++++|
T Consensus       309 l~~~l~~~l~~~~~~~~~-~~~~~~~-iv~~~~~~------~~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~~~~~iR  379 (406)
T PRK09295        309 LMHYALSQLESVPDLTLY-GPQNRLG-VIAFNLGK------HHAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMCR  379 (406)
T ss_pred             HHHHHHHHHhcCCCEEEe-CCCCCce-EEEEEECC------cCHHHHHHH-HHhCCeEEeccccchHHHHHHHCCCCEEE
Confidence            999999999888777744 332  34 33444542      145566554 478899999887543        356899


Q ss_pred             EEee--cCHHHHHHHHHHHHHHHH
Q 014769          392 IAFC--AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       392 is~~--~~~~~l~~~l~~l~~~~~  413 (419)
                      +|++  .+++|++.+++.|+++..
T Consensus       380 iS~~~ynt~~did~l~~~l~~i~~  403 (406)
T PRK09295        380 ASLAMYNTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             EEccCCCCHHHHHHHHHHHHHHHH
Confidence            9995  688999999999988753

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.98  E-value=1e-29  Score=244.26  Aligned_cols=337  Identities=14%  Similarity=0.175  Sum_probs=242.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-----CCCC---CCCCHHHHHHHHHHHHhhCCCCCC-CCcEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-----CYAT---NSGIPPARRAIADYLSRDLPYKLS-ADDVY  111 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~  111 (419)
                      +.+++-|..+.++     ++++.+++++.+.+.....+     .|..   ...+.++|+.+++++      +.+ +++|+
T Consensus        30 ~~~~iyLd~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~   98 (424)
T PLN02855         30 GSKLVYLDNAATS-----QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI------NASTSREIV   98 (424)
T ss_pred             CCCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc------CCCCCCEEE
Confidence            4568999998743     56788889888876532111     1111   122468889999988      443 57999


Q ss_pred             EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      +|+|++++++.++.++    .++||+|+++++.|++    +...++..|.+++.++++++  ..++++.+++.+++++++
T Consensus        99 ~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~l  176 (424)
T PLN02855         99 FTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKL  176 (424)
T ss_pred             EeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceE
Confidence            9999999999998863    5789999999998875    34456778999999887543  358999999999888999


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      |++++|+||||.++|   +++|.++|+++|+++++|++|+.    +.....+..++.   .+++.|++|.++.+|  +||
T Consensus       177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~~~---d~~~~s~~K~~gp~G--~G~  244 (424)
T PLN02855        177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTLGA---DFLVASSHKMCGPTG--IGF  244 (424)
T ss_pred             EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhcCC---CEEEeecccccCCCc--cEE
Confidence            999999999999999   78899999999999999999964    222223333332   377999999765555  899


Q ss_pred             EEeeCCCCccchhhHHHHHHhh----------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDC----------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                      +++++.        +++.+...                      ....++++.....++..+++.......++..++.++
T Consensus       245 l~~~~~--------~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  316 (424)
T PLN02855        245 LWGKSD--------LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVE  316 (424)
T ss_pred             EEEchh--------hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            998752        33332211                      001234566666677777765434567788888999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCC-----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCC
Q 014769          322 SAEICYDGVKEIPCISCPNKP-----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKN  388 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~  388 (419)
                      .++.+++.|++++++.++...     ..+.++.+.++..      +..++...|.+++||.+..|..+        +.++
T Consensus       317 l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~  390 (424)
T PLN02855        317 LGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNA  390 (424)
T ss_pred             HHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCC
Confidence            999999999888787744221     1234555666531      35667767655559999987743        3357


Q ss_pred             eEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          389 WLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       389 ~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++|+|++  .+++|++.+++.|++++.+++
T Consensus       391 ~iRiS~~~ynt~~di~~l~~~l~~~~~~~~  420 (424)
T PLN02855        391 SARASLYFYNTKEEVDAFIHALKDTIAFFS  420 (424)
T ss_pred             eEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence            8999995  689999999999999998764

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.98  E-value=8.3e-30  Score=239.88  Aligned_cols=320  Identities=17%  Similarity=0.138  Sum_probs=227.6

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVL  135 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vl  135 (419)
                      .+.++.+.+++.+.+..   ..|... .-..++++.+++++      ++++ +.+++++|+++++..++.+++.+||+|+
T Consensus         8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl   78 (356)
T cd06451           8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF------QTENGLTFLLSGSGTGAMEAALSNLLEPGDKVL   78 (356)
T ss_pred             cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh------cCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence            45678888887543321   123221 11345666666666      4434 4578899999999999999999999999


Q ss_pred             eeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769          136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL  212 (419)
Q Consensus       136 v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  212 (419)
                      ++.++|++  +...++..|.+++.++.++  ++.+|++.+++.+++ +++++++++|+||||.+.|   +++|.++|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~  153 (356)
T cd06451          79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH  153 (356)
T ss_pred             EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence            99988875  4567788899999988754  357899999999987 8899999999999999999   77889999999


Q ss_pred             CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh---hh---
Q 014769          213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD---CL---  286 (419)
Q Consensus       213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~---~~---  286 (419)
                      |+++++|++|+.    |....++..++.   .+++.|++|+++.| .++||++.++        ++++.+..   ..   
T Consensus       154 ~~~li~D~~~~~----g~~~~~~~~~~~---d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~~~  217 (356)
T cd06451         154 DALLIVDAVSSL----GGEPFRMDEWGV---DVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKGFY  217 (356)
T ss_pred             CCEEEEeeehhc----cCccccccccCc---cEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCcee
Confidence            999999999874    212222222222   26677899997654 3589999865        34444432   00   


Q ss_pred             --------------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEe
Q 014769          287 --------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMV  350 (419)
Q Consensus       287 --------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~  350 (419)
                                    ...++++...+.++.++++.......++..++.+++++.+.+.|.++ +++....+.  .+.++|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~  296 (356)
T cd06451         218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAV  296 (356)
T ss_pred             ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEE
Confidence                          11234455556666666655434556777888889999999999887 666332222  3455667


Q ss_pred             ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769          351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~  413 (419)
                      .++..     .+..+++..|.+++||.+.+|..+..++++|++++  .++++++++++.|+++++
T Consensus       297 ~~~~~-----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~  356 (356)
T cd06451         297 LVPEG-----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK  356 (356)
T ss_pred             ECCCC-----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence            66532     24677777775545999999886655679999995  579999999999998763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.98  E-value=1.3e-29  Score=242.40  Aligned_cols=333  Identities=16%  Similarity=0.157  Sum_probs=229.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +.++++|+..+.   ..+..+|.+++++.+++.....      ..|+......+|++.+++++      +. ++.|++++
T Consensus        45 ~~~~~~~~sn~y---l~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~------g~-~~~i~~~s  114 (410)
T PRK13392         45 PRRVTIWCSNDY---LGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH------GK-ESALLFTS  114 (410)
T ss_pred             CceEEEEECCCc---cCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh------CC-CCEEEECc
Confidence            456888888763   3567789999999988764321      12333324578889999887      32 45566666


Q ss_pred             cHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh----cCCccEEEEeC
Q 014769          115 GCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA----DKNTAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~v~i~~  188 (419)
                      | ++++..++..+..  +||.|+++.+.|..+...+...|.++..++.   +    |.+.+++.+    .+++++|++++
T Consensus       115 G-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~~  186 (410)
T PRK13392        115 G-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFES  186 (410)
T ss_pred             H-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEeC
Confidence            5 5677777776653  7898888777777776777778888766542   1    333343333    24678999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      |+||||.+.+   +++|.++|+++++++|+||+|+...++..+.......+..++ .++++||||.|+++|   ||++++
T Consensus       187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~  260 (410)
T PRK13392        187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS  260 (410)
T ss_pred             CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence            9999999999   889999999999999999999955443222111111111112 378899999999888   999875


Q ss_pred             CCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      .        ++++.++....   ++...+++.+.++.++|+..  +.....+++++++++++.+.|+++ |+. +..+.+
T Consensus       261 ~--------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~  328 (410)
T PRK13392        261 A--------DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL--KTSQTERDAHQDRVAALKAKLNAN-GIP-VMPSPS  328 (410)
T ss_pred             H--------HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCC
Confidence            4        57777765542   23345556777777777652  223345577888999999999887 777 434444


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      + ++.+.++..     .+..++..+|++++||.+.++..+..   ..++|+++  ..++++++.+++.|++++++.
T Consensus       329 ~-~~~i~~~~~-----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~  398 (410)
T PRK13392        329 H-IVPVMVGDP-----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL  398 (410)
T ss_pred             C-EEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence            4 444444321     12457777887778999998765433   36899999  368999999999999987653

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.97  E-value=2.3e-30  Score=214.85  Aligned_cols=332  Identities=19%  Similarity=0.261  Sum_probs=249.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .|++++.+.-....   ..|.|..        +.-  -..|+++. ..+++.+++.-      -++++++|.+..|+.|.
T Consensus        39 ~G~~iv~ld~~e~~---ryPdP~q--------~ef--k~~~~d~r-nk~ls~a~~~d------kpLt~dnic~GvGsDE~   98 (375)
T KOG0633|consen   39 LGRDIVKLDANENP---RYPDPEQ--------MEF--KYVYPDPR-NKRLSDALAQD------KPLTSDNICVGVGSDEL   98 (375)
T ss_pred             cCCCceEeccccCC---CCcCHHH--------ccc--ccccCCcc-cchhhhhcccC------CCCCccceEEecCcHHH
Confidence            47777777766533   2333322        110  11355432 34555555543      27899999999999999


Q ss_pred             HHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccC
Q 014769          120 VEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNV  196 (419)
Q Consensus       120 l~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~  196 (419)
                      +..+++..+.|| ++|+.-.|+|..|...+...+++++.+++.+  ++.++.|++...++.  ..+++++++|+||||..
T Consensus        99 ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~  176 (375)
T KOG0633|consen   99 IDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSI  176 (375)
T ss_pred             HHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCccc
Confidence            999999999999 9999999999999888888999999999866  678999999887754  57889999999999999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      +..+++.+|.+.=.  |.++++||+|-+|.-.+.   .+.-....++++++.+|||.||++|+|+||...+.        
T Consensus       177 ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S---~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~--------  243 (375)
T KOG0633|consen  177 IKEDDILKILEMPD--NGLVVVDEAYIDFSGVES---RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPL--------  243 (375)
T ss_pred             ccHHHHHHHHhCCC--CcEEEEeeeeEeeccccc---cchHhHhCCceeehhhhhhhcCcceeEeecccccH--------
Confidence            99999999987433  789999999999763222   22233455688999999999999999999998865        


Q ss_pred             hHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          277 GIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       277 ~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      .+++.+..... .+..|.++..++.++++...-.+++..++.+.+.+.++...|.++|++.-+..+..++|+++++....
T Consensus       244 ~ia~iln~~Ka-PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~  322 (375)
T KOG0633|consen  244 SIAEILNRAKA-PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGD  322 (375)
T ss_pred             HHHHHHHhccC-CccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCC
Confidence            46666665543 45567777777777887655678888899999999999999999887764446777899999887431


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEee-cCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVT-PGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                         ..-+..+..+++.++||.|+ -|+-.+..+++|++.++++|. +-+++.++++
T Consensus       323 ---n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~~  374 (375)
T KOG0633|consen  323 ---NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQF  374 (375)
T ss_pred             ---cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHhh
Confidence               11245566777788999986 444445579999999987644 5566666654

>PRK10534 L-threonine aldolase; Provisional

Probab=99.97  E-value=6e-30  Score=238.42  Aligned_cols=315  Identities=15%  Similarity=0.142  Sum_probs=217.8

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI  123 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~  123 (419)
                      +|||+.+..     ..++|.+.+++.+....  ...|++..+..+|+++|++++      +.  +.+++++|+++++...
T Consensus         1 ~~~~~~~~~-----~~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~------g~--~~~~v~~~g~~a~~~~   65 (333)
T PRK10534          1 MIDLRSDTV-----TRPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS------GK--EAALFLPTGTQANLVA   65 (333)
T ss_pred             CcccccccC-----CCCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh------CC--CeEEEeCchHHHHHHH
Confidence            477887752     23678888888765433  347876678899999999997      33  4456888888888888


Q ss_pred             HHHhcCCCCeEEeeCCCCCC-cHHH-HhhcC-CEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccc
Q 014769          124 LSVLARPGANVLLPRPGWPY-YEGI-AQRKQ-VEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCG  194 (419)
Q Consensus       124 ~~~l~~~gd~vlv~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG  194 (419)
                      +.+++.+||.|+++.|+|.. +... ....+ ..++.++++  .++.+|++++++++++      ++++|++++|+  ||
T Consensus        66 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G  141 (333)
T PRK10534         66 LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NG  141 (333)
T ss_pred             HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CC
Confidence            88889999999999888752 3221 23333 566666553  4578999999998865      57888998766  59


Q ss_pred             cCCCHHHHHHHHHHHHhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE-EEEeeCCCC
Q 014769          195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG-WLVTNDPNG  271 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~  271 (419)
                      .+++.+++++|+++|+++++++++||+|.+...  .+..   ........+.+ +.||||.|+++   +| |++++.   
T Consensus       142 ~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~---~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~~---  211 (333)
T PRK10534        142 KVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCE---LKEITQYCDSF-TICLSKGLGTP---VGSLLVGNR---  211 (333)
T ss_pred             eecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCC---HHHHHhcCCEE-EEEeEcCCCCc---ccceEEcCH---
Confidence            999999999999999999999999999874221  1111   11111111222 23899987654   68 576644   


Q ss_pred             ccchhhHHHHHHhhhcccc---CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769          272 IFQKSGIIDSIKDCLSIYS---DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT  348 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  348 (419)
                           ++++.++.....+.   ..+.+.+.++...++.    . .+..++.++.++++.+.|+++ |+. +..| .++|+
T Consensus       212 -----~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~----~-~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~~nfv  278 (333)
T PRK10534        212 -----DYIKRARRWRKMTGGGMRQAGILAAAGLYALKH----N-VARLQEDHDNAAWLAEQLREA-GAD-VMRQ-DTNML  278 (333)
T ss_pred             -----HHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh----h-HHHHHHHHHHHHHHHHHHHhC-CCc-cCCC-CceEE
Confidence                 67888876654221   2233445555555542    1 223333455678899999987 777 4345 68999


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~  413 (419)
                      |++++.      .+..++ .++++++||.+.|+.      ++|++.+  .+++++++++++|++++.
T Consensus       279 ~~~~~~------~~~~~~-~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~  332 (333)
T PRK10534        279 FVRVGE------EQAAAL-GEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA  332 (333)
T ss_pred             EEECCc------hhHHHH-HHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence            999863      134455 456688899998873      5788774  689999999999997764

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.97  E-value=3.2e-29  Score=237.92  Aligned_cols=334  Identities=13%  Similarity=0.110  Sum_probs=228.4

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      .+|..+|||..|.+..... +.+|.+.+++.+++....  ...|++ .-..++++.+++++    |    .+++++++|+
T Consensus        24 ~~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----g----~~~~~~~~sg   93 (379)
T TIGR00707        24 VNGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYYT-EPQEELAEKLVEHS----G----ADRVFFCNSG   93 (379)
T ss_pred             CCCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccCC-HHHHHHHHHHHhhC----C----CCEEEEeCCc
Confidence            3588899999985433222 356899999999887532  123432 22345555555554    3    2499999999


Q ss_pred             HHHHHHHHHHhc---C----CCCeEEeeCCCCCCcHHHHhhcCCEEEE----EeccCCCCccc--ChHHHHHhhcCCccE
Q 014769          117 KQAVEVILSVLA---R----PGANVLLPRPGWPYYEGIAQRKQVEVRH----FDLLPERNWEV--DLDAVEALADKNTAA  183 (419)
Q Consensus       117 ~~al~~~~~~l~---~----~gd~vlv~~p~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~--~~~~l~~~~~~~~~~  183 (419)
                      ++++..+++++.   .    ++|+|++++|+|+++...+...+.....    .++..+..+..  |++.+++.+.+++++
T Consensus        94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  173 (379)
T TIGR00707        94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAA  173 (379)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeE
Confidence            999999988663   2    3799999999999877666555443221    12211111111  789999988777888


Q ss_pred             EEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE
Q 014769          184 MVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG  262 (419)
Q Consensus       184 v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  262 (419)
                      ++++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+... ++...+...+++   +|||.++ +|+|+|
T Consensus       174 v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~~-~G~riG  248 (379)
T TIGR00707       174 VIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFF-AYEHYGIEPDII---TLAKGLG-GGVPIG  248 (379)
T ss_pred             EEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-hHHhcCCCCCEE---EEccccc-CCcccE
Confidence            8886667777764 799999999999999999999999999876654321 211222222333   6899987 999999


Q ss_pred             EEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC-C--CCCC
Q 014769          263 WLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI-P--CISC  338 (419)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~  338 (419)
                      |+++++        ++++.++... ...++.+++.|.++.++|+...   -.+..++++++++.+++.|+++ .  ++. 
T Consensus       249 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-  316 (379)
T TIGR00707       249 ATLAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---KERLLENVKEKGDYFKERLEELGKNYPNK-  316 (379)
T ss_pred             EEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHHhhCCCC-
Confidence            999865        5777776542 3345678889999888886421   1234556666667777666553 1  221 


Q ss_pred             CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          339 PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       339 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                      . .+..|.++|+.++.       +..++...| .++||.+.|+.    .+++|+++  ..+++++++++++|++++
T Consensus       317 ~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~  379 (379)
T TIGR00707       317 E-VRGKGLMLGIELEA-------PCKDIVKKA-LEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI  379 (379)
T ss_pred             c-cccCceEEEEEecC-------cHHHHHHHH-HHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence            1 23467888888763       356666665 67899999853    47899997  368999999999998763

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.97  E-value=5.8e-29  Score=236.39  Aligned_cols=340  Identities=13%  Similarity=0.101  Sum_probs=226.4

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.++||..|........ -+|.+.+++.+++.....  .+. ....+....+++.+.+..    ..+++++++|++
T Consensus        27 d~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGs   98 (389)
T PRK01278         27 DEDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGA   98 (389)
T ss_pred             ECCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcH
Confidence            345889999998743332222 679999999999875321  111 112233444555554322    246899999999


Q ss_pred             HHHHHHHHHh----cCCCC----eEEeeCCCCCCcHHHHhhcCCEEEEEec-cC-CCCcc----cChHHHHHhhcCCccE
Q 014769          118 QAVEVILSVL----ARPGA----NVLLPRPGWPYYEGIAQRKQVEVRHFDL-LP-ERNWE----VDLDAVEALADKNTAA  183 (419)
Q Consensus       118 ~al~~~~~~l----~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~~~~~l~~~~~~~~~~  183 (419)
                      +|++.+++++    ..+||    +|++.+++|+++.......+........ .+ ..++.    .|++.+++.+++++++
T Consensus        99 eA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~a  178 (389)
T PRK01278         99 EAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAA  178 (389)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEE
Confidence            9999998887    34565    8999999999887666555433222110 00 11111    4789999998877777


Q ss_pred             EEEeCCCCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE
Q 014769          184 MVIINPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG  262 (419)
Q Consensus       184 v~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  262 (419)
                      |++..++||+| .++|.+++++|.++|++||+++|+||+|.++.+.+..+. ....+..+.   +.|+||.++ +|+|+|
T Consensus       179 vivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~-~~~~~~~pd---i~t~sK~l~-~G~~ig  253 (389)
T PRK01278        179 ILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFA-HEWAGVTPD---IMAVAKGIG-GGFPLG  253 (389)
T ss_pred             EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccee-ecccCCCCC---EEEEehhcc-CCcceE
Confidence            78777788888 788999999999999999999999999998766654321 112222222   348999975 899999


Q ss_pred             EEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch----HHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          263 WLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE----DFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      |+++++        ++++.+.... ..+++.+++.|.++.++|+....    +.+.++.++++++.+.+   .+..+++.
T Consensus       254 ~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~~  322 (389)
T PRK01278        254 ACLATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGL---VDRFPDVI  322 (389)
T ss_pred             EEEEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH---HhhCCCce
Confidence            999975        4666665443 33556788889888777764321    12222223333332222   22233222


Q ss_pred             CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHH
Q 014769          338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~  414 (419)
                      .. ....|.++++.++.       +..++..+++++ ||.+.|+.    .+++|+++  ..+++++++++++|++++++
T Consensus       323 ~~-v~g~G~~~~i~~~~-------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        323 EE-VRGKGLLLGLKCVV-------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES  388 (389)
T ss_pred             ee-EecccEEEEEEEec-------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence            12 23357787877742       467788888665 99999874    57899997  46899999999999998865

>PLN02483 serine palmitoyltransferase

Probab=99.97  E-value=2e-28  Score=236.71  Aligned_cols=335  Identities=14%  Similarity=0.107  Sum_probs=228.2

Q ss_pred             CCCeeeccCCCCCCCCCCC-----ChHHHHHHHHHHHhC--CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           41 PRPVVPLGYGDPTAFPCFR-----TAVEAEDAIVDAVRS--GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~-----~~~~v~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      +..++||+..+-   ..+.     ..+.+.+++.+.-..  .....|+...+..++++++|+++      + .++.|+++
T Consensus        99 ~~~~~n~~s~~Y---Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~------g-~~~ai~~~  168 (489)
T PLN02483         99 TRRCLNLGSYNY---LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFV------G-KPAAIVFG  168 (489)
T ss_pred             CceEEEeecCCc---cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHh------C-CCcEEEEC
Confidence            567899988863   2333     234455554443111  12234777778899999999998      3 35567776


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-------CC-----c
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-------KN-----T  181 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~-----~  181 (419)
                      +| ..++..++.+++++||.|++++|+|.++...++..|++++.++..       |.+.+++.++       ++     .
T Consensus       169 ~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~  240 (489)
T PLN02483        169 MG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK  240 (489)
T ss_pred             CH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence            65 555557788899999999999999999999999999999988753       3344444332       12     2


Q ss_pred             cEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC--CCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          182 AAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG--SIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       182 ~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      +.++++++ .|++|.+.+   +++|+++|+++++++|+||+|+....+  |.+.......+..+..|+++||||++++.|
T Consensus       241 k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G  317 (489)
T PLN02483        241 KIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG  317 (489)
T ss_pred             eEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc
Confidence            45666665 589999988   999999999999999999999854433  222222223333445799999999998877


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcc----cchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEK----TKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                         ||++++.        ++++.++....   +....+++...++.+.++.    ...+...+++++++++++.+++.|+
T Consensus       318 ---G~i~~~~--------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~  386 (489)
T PLN02483        318 ---GYIAGSK--------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQ  386 (489)
T ss_pred             ---eEEEcCH--------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHH
Confidence               9999865        68888876531   1222333333334444431    1123455667889999999999999


Q ss_pred             cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLG  406 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~  406 (419)
                      ++ |+. +..+.++..+++.+...     .+..++..+|++ +||.+.|..++..   .+.+|++++  .++++|+++++
T Consensus       387 ~~-G~~-v~~~~~sp~~~l~l~~~-----~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~  458 (489)
T PLN02483        387 KM-GFE-VLGDNDSPVMPIMLYNP-----AKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKALE  458 (489)
T ss_pred             HC-CCc-ccCCCCCCEEEEEECCH-----HHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence            88 776 43455555666554321     124567777765 6999997333222   368999994  58999999999


Q ss_pred             HHHHHHHHH
Q 014769          407 RMKAFCQRH  415 (419)
Q Consensus       407 ~l~~~~~~~  415 (419)
                      +|+++++.+
T Consensus       459 ~L~~~~~~~  467 (489)
T PLN02483        459 VISEVGDLV  467 (489)
T ss_pred             HHHHHHHHh
Confidence            999998765

>PRK07179 hypothetical protein; Provisional

Probab=99.97  E-value=2.8e-28  Score=232.98  Aligned_cols=332  Identities=14%  Similarity=0.114  Sum_probs=229.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC---C--CCCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---K--FNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~--~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      +|..+++|+..+   +.++..+|.+++++.+++...   .  ...|. ......+|++.+++++      +  .+.++++
T Consensus        52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~------g--~~~~~~~  120 (407)
T PRK07179         52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT------G--FESCLLC  120 (407)
T ss_pred             CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh------C--CCcEEEE
Confidence            466778888776   455678899999999988642   1  11121 1123568888888887      3  2567889


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCc
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNP  192 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~np  192 (419)
                      +|+++|+..+++++..+||.|++..+.|......+...|.++..++.       .|++.+++++++ ++++|++.+|+||
T Consensus       121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~  193 (407)
T PRK07179        121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST  193 (407)
T ss_pred             CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence            99999999999999999999999999998887777778877665432       488999988875 4677788889999


Q ss_pred             cccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      ||.+.|   +++|.++|+++|+++|+||+|+...++..+...+..++.... .+++.|+||.++   .|+||+++++   
T Consensus       194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~---  264 (407)
T PRK07179        194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPR---  264 (407)
T ss_pred             CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCH---
Confidence            999999   889999999999999999999865443222211222322122 488889999974   3689999865   


Q ss_pred             ccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769          272 IFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT  348 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  348 (419)
                           ++++.+.....   ++.+.++....++.++++..  ....+.+++++++++++.+.|+++ ++. +. . .+.++
T Consensus       265 -----~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~-~-~~~i~  333 (407)
T PRK07179        265 -----ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYN-IR-S-ESQII  333 (407)
T ss_pred             -----HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CC-C-CCCEE
Confidence                 46566654321   22333333333344444431  223456788999999999999987 776 42 2 35566


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ++.++..      ...+.+...|.++||.+..-....   ..+++||+++  .++++++++++.|++++.+.
T Consensus       334 ~l~~~~~------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        334 ALETGSE------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             EEEeCCH------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence            7766421      123334444577899743211111   2478999995  58999999999999988764

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.97  E-value=2.2e-28  Score=230.49  Aligned_cols=295  Identities=12%  Similarity=0.123  Sum_probs=208.8

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN  165 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  165 (419)
                      +.++++.+|+++      +.  +.+++++|+++++..++.++.++||.|+++.+.|++....++..|.+++.+++..+.+
T Consensus        53 ~~~~~e~lA~~~------g~--~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~  124 (370)
T TIGR02539        53 IHDFLEDLAEFL------GM--DEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPE  124 (370)
T ss_pred             HHHHHHHHHHHh------CC--CceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCccc
Confidence            467788888887      33  4677799999999999999999999999999997766677888999999998765556


Q ss_pred             cccChHHHHHhhcC-------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          166 WEVDLDAVEALADK-------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       166 ~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                      +.+|++.+++.+++       ++++|++++|+||||...+   +++|.++|+++|+++|+|++|+.....    ......
T Consensus       125 ~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~----~~~~~~  197 (370)
T TIGR02539       125 YKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP----VSAKEI  197 (370)
T ss_pred             CCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC----CCHHHc
Confidence            78999999998752       5678999999999999988   888999999999999999999973211    111122


Q ss_pred             CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-c--------cCCchHHHHHHHHHHcccch
Q 014769          239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-Y--------SDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~--------~~~~~~~~~a~~~~l~~~~~  309 (419)
                      +   ..++++|+||+++ +|.|+||+++++        ++++.++..... .        .+.....+.++..++... .
T Consensus       198 ~---~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~  264 (370)
T TIGR02539       198 G---ADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHV-V  264 (370)
T ss_pred             C---CCEEEeeCccccc-CCCCEEEEEECH--------HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHH-H
Confidence            2   2367799999986 567899999865        577776654321 0        111112344444444321 2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCccc---ccCCCCHHHHHHHHHHhcCeE-eecCCCC
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWL---LEDINDDIEFALKLAKEESVI-VTPGIYV  384 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~-v~~g~~~  384 (419)
                      +++++..+.++. ++++++.|+++ ++..+ ..|..++|++++++...   .....+...+...| .++||. +.+    
T Consensus       265 ~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L-~e~GI~~ir~----  337 (370)
T TIGR02539       265 ERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEEL-KKRGIHGIRS----  337 (370)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHH-HhCCCccccC----
Confidence            444444444444 45899999887 66532 24667888888876310   00011223455555 677997 544    


Q ss_pred             CCCCeEEEEe-ecCHHHHHHHHHHHHHHHHHH
Q 014769          385 GLKNWLRIAF-CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       385 ~~~~~~Ris~-~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +.++++|+++ +.++++++++++.|+++++++
T Consensus       338 ~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~  369 (370)
T TIGR02539       338 GQTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY  369 (370)
T ss_pred             CcceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence            3357999997 568999999999999988753

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.97  E-value=2e-28  Score=233.82  Aligned_cols=325  Identities=15%  Similarity=0.147  Sum_probs=225.3

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCCCCCC----CHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYATNSG----IPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ++.|..+.++     ++++.+++++.+.+.....   ..|....+    ..++|+.+++++      +.++++|++++|+
T Consensus        18 ~~yl~~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~------~~~~~~v~~~~~~   86 (397)
T TIGR01976        18 RVFFDNPAGT-----QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL------NADPPEVVFGANA   86 (397)
T ss_pred             eEEecCCccC-----CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCCH
Confidence            6888888643     4678889999888754321   23543333    357778888877      4556689999999


Q ss_pred             HHHHHHHHHHh---cCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769          117 KQAVEVILSVL---ARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       117 ~~al~~~~~~l---~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      ++++..++.++   .++||+|++++|.|++..    ..++..|.++..++++++ ++.++++.++++++++++++++++|
T Consensus        87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~  165 (397)
T TIGR01976        87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA  165 (397)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence            99998877775   578999999999987643    455778999999887643 3578999999999888999999999


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP  269 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  269 (419)
                      +||||.+.+   +++|.++|+++|+++++|+++..    +.....+..++   ..+++.|++|++   |+|+|++++++ 
T Consensus       166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~~---~d~~~~s~~K~~---g~~~G~l~~~~-  231 (397)
T TIGR01976       166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQATG---ADFLTCSAYKFF---GPHMGILWGRP-  231 (397)
T ss_pred             CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHcC---CCEEEEechhhc---CCceEEEEEcH-
Confidence            999999998   99999999999999999999853    22222222232   236678999985   45699999865 


Q ss_pred             CCccchhhHHHHHHhhhc-----------cccCCchHHHHHHHHHHcc---cc-----------hHHHHHHHHHHHHHHH
Q 014769          270 NGIFQKSGIIDSIKDCLS-----------IYSDIPTFIQGAIPQILEK---TK-----------EDFFCKLIDTLRESAE  324 (419)
Q Consensus       270 ~~~~~~~~~~~~l~~~~~-----------~~~~~~~~~~~a~~~~l~~---~~-----------~~~~~~~~~~~~~~~~  324 (419)
                             ++++.+.....           ..++++.....++..+++.   ..           ..++++..++..+..+
T Consensus       232 -------~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~  304 (397)
T TIGR01976       232 -------ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAE  304 (397)
T ss_pred             -------HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHH
Confidence                   34444432210           0123343333333333332   11           0135666777888889


Q ss_pred             HHHHHhhcCCCCCCCCC---CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----------CCCeE
Q 014769          325 ICYDGVKEIPCISCPNK---PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----------LKNWL  390 (419)
Q Consensus       325 ~l~~~l~~~~~~~~~~~---p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----------~~~~~  390 (419)
                      ++.+.|++++++.++..   ...+.++.+.++.      .+..++..+| .++||.+..|..+.           ..+++
T Consensus       305 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~i  377 (397)
T TIGR01976       305 YLLVGLSDLPGVTLYGVARLAARVPTVSFTVHG------LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGVV  377 (397)
T ss_pred             HHHHHHhcCCCEEEeCCCCccCCCceEEEEeCC------cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCeE
Confidence            99999988866764322   1134455555542      1356677666 67799999886553           24689


Q ss_pred             EEEee--cCHHHHHHHHHHH
Q 014769          391 RIAFC--AEPSALKDGLGRM  408 (419)
Q Consensus       391 Ris~~--~~~~~l~~~l~~l  408 (419)
                      |+|+.  .++++++.+++.|
T Consensus       378 Ris~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       378 RVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             EEEeeccCCHHHHHHHHHhC
Confidence            99993  6889999998764

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.97  E-value=4.3e-28  Score=231.90  Aligned_cols=340  Identities=14%  Similarity=0.073  Sum_probs=234.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC------CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS------GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      ..+.++|..|.      .+++|.+++++.+.+..      .....|....+...+++.+++++.+.+|..  ...|+++ 
T Consensus        18 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~-   88 (402)
T cd00378          18 QRETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPH-   88 (402)
T ss_pred             HHhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecC-
Confidence            35578887775      24578899998765421      112345556677788887777766656643  4455555 


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH-----HhhcCCEEEEEeccCC-CCcccChHHHHHhhc-CCccEEEEe
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGI-----AQRKQVEVRHFDLLPE-RNWEVDLDAVEALAD-KNTAAMVII  187 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~  187 (419)
                      |+++++..++.++.++||+|++++|+|.++...     ++..|..+..++++.+ +++.+|++.+++.+. +++++++++
T Consensus        89 sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~  168 (402)
T cd00378          89 SGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAG  168 (402)
T ss_pred             CcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEec
Confidence            467999999999999999999999999866432     5566777777766543 257899999999885 578888888


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc-cccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY-GHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      +|+||+  ..+   +++|.++|+++|+++|+|++| .++.+.+....++.  ..   .++++|+||++  +|+|.||+++
T Consensus       169 ~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~---dv~~~s~sK~l--~G~~gg~i~~  236 (402)
T cd00378         169 ASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA---DVVTTTTHKTL--RGPRGGLILT  236 (402)
T ss_pred             CcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC---cEEEeccccCC--CCCCceEEEe
Confidence            888764  445   889999999999999999996 44444442222222  22   26789999984  8899999998


Q ss_pred             eCCCCccchhhHHHHHHhhhc-c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          267 NDPNGIFQKSGIIDSIKDCLS-I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      +++       ++++.++.... . .+++....+.++..++......+..+.+++++++++.+.+.|+++ ++.++..|.+
T Consensus       237 ~~~-------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~  308 (402)
T cd00378         237 RKG-------ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTD  308 (402)
T ss_pred             ccH-------HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCC
Confidence            652       46666655432 1 222222333343444443222356777888999999999999987 7774435678


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC------CCCeEEEEee------cCHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG------LKNWLRIAFC------AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~------~~~~~Ris~~------~~~~~l~~~l~~l~~~~  412 (419)
                      ++++|++++...    .+...+ .++++++||.+.++..+.      ...++|+++.      .++++++.+++.|++++
T Consensus       309 ~~~v~v~~~~~~----~~~~~~-~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~  383 (402)
T cd00378         309 NHLVLVDLRPKG----ITGKAA-EDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL  383 (402)
T ss_pred             CeEEEEeCCccC----CCHHHH-HHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence            999999987421    123444 455688999997643222      2468999983      25899999999999987


Q ss_pred             HH
Q 014769          413 QR  414 (419)
Q Consensus       413 ~~  414 (419)
                      ++
T Consensus       384 ~~  385 (402)
T cd00378         384 KD  385 (402)
T ss_pred             hc
Confidence            64

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.97  E-value=3.7e-28  Score=231.92  Aligned_cols=333  Identities=17%  Similarity=0.147  Sum_probs=228.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +.++++|+..+   +..+..+|.+++++.++++.....      .|+......+|++.+++++      +  .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~------g--~~~~l~~~  112 (402)
T TIGR01821        44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH------G--KESALVFT  112 (402)
T ss_pred             CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh------C--CCeEEEEC
Confidence            46789999987   456788999999999998753211      1222223467888888877      2  23566666


Q ss_pred             cHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---C-CccEEEEeC
Q 014769          115 GCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---K-NTAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~v~i~~  188 (419)
                      ++++++..++..+..  +++.|+.....|......+...|.++..++.       .|.+++++.++   + ++++|++++
T Consensus       113 sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~  185 (402)
T TIGR01821       113 SGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFES  185 (402)
T ss_pred             chHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcC
Confidence            678898888888765  6676666655665555666667777655432       25566666554   2 467889999


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      |+||+|.+.|   +++|.++|+++|+++|+||+|+...++..........+. ....++++||||.++++|   ||++++
T Consensus       186 ~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~  259 (402)
T TIGR01821       186 VYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS  259 (402)
T ss_pred             CCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC
Confidence            9999999999   899999999999999999999955443222111111111 123588899999998888   998876


Q ss_pred             CCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      +        ++++.++...   .++.+.++..+.++.++|+.....  ....+++.++++++.+.|+++ ++.++ .+. 
T Consensus       260 ~--------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~-  326 (402)
T TIGR01821       260 R--------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVI-PNP-  326 (402)
T ss_pred             H--------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCC-
Confidence            4        5777776442   223456666777777777653211  444556678888899999887 77633 444 


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +.++.+.++..     ....++..+|++++||.+.+...+..   ..++|+++  ..++++++++++.|+++++++
T Consensus       327 ~~i~~i~~~~~-----~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  397 (402)
T TIGR01821       327 SHIVPVIIGDA-----ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL  397 (402)
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            44555555421     12456777777778999988654433   36899999  468999999999999998764

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.97  E-value=1e-28  Score=235.55  Aligned_cols=342  Identities=14%  Similarity=0.069  Sum_probs=234.0

Q ss_pred             CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      .+|++++||..|.+...  ++ .+|.+.+++.++++...  ...|.++.+ .++.+.+++++    +. ..++++++++|
T Consensus        40 ~dg~~~lD~~s~~~~~~--lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~~-~~~~~v~~~~s  111 (398)
T PRK03244         40 VDGKEYLDLLGGIAVNA--LGHAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----GA-PEGGRVFFCNS  111 (398)
T ss_pred             CCCCEEEECCcCHhhcc--CCCCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----CC-CCCCEEEEeCc
Confidence            45889999999865432  33 37999999999987532  234655332 35555555543    31 23579999999


Q ss_pred             HHHHHHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhc-CCEEEEEeccC--CCCc---ccChHHHHHhhcCCccEEEEeC
Q 014769          116 CKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRK-QVEVRHFDLLP--ERNW---EVDLDAVEALADKNTAAMVIIN  188 (419)
Q Consensus       116 ~~~al~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~-g~~~~~~~~~~--~~~~---~~~~~~l~~~~~~~~~~v~i~~  188 (419)
                      +++++..+++.+..+| +.|+..+++|+++....... |.........+  .+-.   -.|++.+++.+.++++++++..
T Consensus       112 gsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep  191 (398)
T PRK03244        112 GAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEP  191 (398)
T ss_pred             hHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEec
Confidence            9999999999876666 57778888998875443322 21111000000  0000   0278889988876778888888


Q ss_pred             CCCccccCCCH-HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTY-HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      ++||+|.+++. +++++|.++|+++|+++|+||+|.++.+.|..+ .+...+..+++   .+|||.++ +|+|+||++++
T Consensus       192 ~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~  266 (398)
T PRK03244        192 IQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPIGACLAF  266 (398)
T ss_pred             ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCcccEEEEEc
Confidence            89999998755 559999999999999999999999876655422 11112222233   37899976 89999999997


Q ss_pred             CCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCce
Q 014769          268 DPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGS  345 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g  345 (419)
                      +        ++++.+... ...+++.+++.+.++.++|+....   .+..++++++.+.+.+.|+++ +...+ .....|
T Consensus       267 ~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g  334 (398)
T PRK03244        267 G--------PAADLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRG  334 (398)
T ss_pred             H--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeecc
Confidence            6        566766543 233567888999999888874221   234566777778888888875 22211 123468


Q ss_pred             EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +++|+.++..      ....+..++ .++||.+.+..    .+++|+++.  .++++++++++.|++++++..
T Consensus       335 ~~~~i~~~~~------~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~  396 (398)
T PRK03244        335 LLLGIVLTAP------VAKAVEAAA-REAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA  396 (398)
T ss_pred             EEEEEEEecc------HHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence            8999988531      245666666 56799998742    478999983  689999999999999998653

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.97  E-value=1.2e-28  Score=230.52  Aligned_cols=312  Identities=14%  Similarity=0.109  Sum_probs=217.9

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP  137 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~  137 (419)
                      +++++.+++++.+.....  ..|.+..+..++++.+++++      +  ++++++++|+++++..++.+++++||+|+++
T Consensus         8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~   77 (338)
T cd06502           8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVICH   77 (338)
T ss_pred             CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence            567889999998765332  25666667788888888887      3  5678888888999999999999999999999


Q ss_pred             CCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-------CccEEEEeCCCCccccCCCHHHHHHHHH
Q 014769          138 RPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-------NTAAMVIINPGNPCGNVFTYHHLQEIAE  207 (419)
Q Consensus       138 ~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~i~~  207 (419)
                      .|+|..+..   .....|.+++.++.+   .+.+|++.+++++++       +++++++++|+|| |.+++.+++++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~  153 (338)
T cd06502          78 ETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA  153 (338)
T ss_pred             cCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence            999976432   345578888888753   256899999998864       6788999999997 66779999999999


Q ss_pred             HHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE-eeCCCCccchhhHHHHHHhhh
Q 014769          208 MARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGIIDSIKDCL  286 (419)
Q Consensus       208 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~l~~~~  286 (419)
                      +|+++|+++|+|++|..+.....+. ++..+....+ +++.|+||+++++|   |+++ .++        ++++.++...
T Consensus       154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~~--------~~~~~~~~~~  220 (338)
T cd06502         154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGNR--------DFIARARRRR  220 (338)
T ss_pred             HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECCH--------HHHHHHHHHH
Confidence            9999999999999986432211111 2222211222 45779999998887   5544 432        5677776553


Q ss_pred             c---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCH
Q 014769          287 S---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDD  363 (419)
Q Consensus       287 ~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~  363 (419)
                      .   .+...+.+.+.++...|+..   ...+..+++.++++++.+.|+++ ++. +..+. +.++.++++...    ...
T Consensus       221 ~~~~~~~~~~~~~~~a~~~~L~~~---~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~-~~~~~v~~~~~~----~~~  290 (338)
T cd06502         221 KQAGGGMRQSGFLAAAGLAALEND---LWLRRLRHDHEMARRLAEALEEL-GGL-ESEVQ-TNIVLLDPVEAN----AVF  290 (338)
T ss_pred             HHhCCChhhHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHhc-CCC-ccccc-CCeEEEecCCcc----HHH
Confidence            2   12334566677777777642   23455567778888999999887 454 42444 445566654210    011


Q ss_pred             HHHHHHHH--HhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769          364 IEFALKLA--KEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKA  410 (419)
Q Consensus       364 ~~~~~~ll--~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~  410 (419)
                      .++..++.  .++|+.+.+..    .+++|+++.  .++++++++++.+++
T Consensus       291 ~~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         291 VELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             HHHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            23333332  15799987753    278999995  488999999998864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PLN02721 threonine aldolase

Probab=99.97  E-value=2.1e-28  Score=230.28  Aligned_cols=330  Identities=15%  Similarity=0.113  Sum_probs=218.0

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV  122 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~  122 (419)
                      .+++|+.+.+.    . +++.+.+++.+........+|++  ...++|+++++++.      .  +.+++++++++++..
T Consensus         6 ~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~------~--~~~~~~~~Gs~a~~~   70 (353)
T PLN02721          6 RVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFG------K--EAALFVPSGTMGNLI   70 (353)
T ss_pred             hhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhC------C--ceeEEecCccHHHHH
Confidence            46889999865    2 46788888876411222224443  36899999999983      2  235666666767677


Q ss_pred             HHHHhcC-CCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhc-------CCccEEEEeCC-C
Q 014769          123 ILSVLAR-PGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-------KNTAAMVIINP-G  190 (419)
Q Consensus       123 ~~~~l~~-~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p-~  190 (419)
                      ++.+++. +||.|++++|+|.....   .+...|.++..++.+  .++.+|++.++++++       +++++++++++ +
T Consensus        71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~  148 (353)
T PLN02721         71 SVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHA  148 (353)
T ss_pred             HHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEecccc
Confidence            7887777 99999999999865443   567778888888754  345689999999987       57888888775 7


Q ss_pred             CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE-EEeeCC
Q 014769          191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW-LVTNDP  269 (419)
Q Consensus       191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~  269 (419)
                      ||||.++|.+++++|.++|+++|+++|+|++|........+. ........ ...++.|+||+++.   ++|+ ++.++ 
T Consensus       149 np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~~-~d~~~~s~sK~l~~---~~G~~~~~~~-  222 (353)
T PLN02721        149 NCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVKA-ADSVSVCLSKGLGA---PVGSVIVGSK-  222 (353)
T ss_pred             ccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhhh-CCEEEEecccccCC---ceeeEEecCH-
Confidence            899999999999999999999999999999986422110011 11111111 11345579999754   3576 44432 


Q ss_pred             CCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-CCCCCceEE
Q 014769          270 NGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISC-PNKPEGSMV  347 (419)
Q Consensus       270 ~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~p~~g~~  347 (419)
                             ++++.+...... ..++....+.++..+...  .+..++ .++..++++.+.+.|++++++.+ +..|. +.+
T Consensus       223 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~  291 (353)
T PLN02721        223 -------SFIRKAKRLRKTLGGGMRQVGVLAAAALVAL--QENVPK-LEDDHKKAKLLAEGLNQIKGLRVNVAAVE-TNI  291 (353)
T ss_pred             -------HHHHhHHHHHHhcCCCeehhHHHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHHHhCCCcEEecCCcc-ceE
Confidence                   566665544332 222222222222211111  123333 23345667888999988877742 33444 557


Q ss_pred             EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769          348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                      +|++++...   ..+..++..+| .++||.+.|+.    ..++|++++  .+++++++++++|++++..
T Consensus       292 ~~~~~~~~~---~~~~~~~~~~L-~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~  352 (353)
T PLN02721        292 VYFDITDGS---RITAEKLCKSL-EEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT  352 (353)
T ss_pred             EEEEccCCc---cccHHHHHHHH-HhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence            888886410   01456777777 57899999974    568999994  5899999999999988753

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.97  E-value=6.8e-28  Score=230.58  Aligned_cols=333  Identities=18%  Similarity=0.157  Sum_probs=226.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +.++++|+..|   +..+..+|.+.+++.+++.....      ..|.+.....+|++.+++++      + .++. ++.+
T Consensus        45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~------g-~~~~-~~~~  113 (407)
T PRK09064         45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH------G-KEAA-LVFT  113 (407)
T ss_pred             CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh------C-CCcE-EEEC
Confidence            46789999987   34577889999999998765322      12333334567888888876      2 2344 4445


Q ss_pred             cHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeC
Q 014769          115 GCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~  188 (419)
                      ++++++..++..+..  +++.|+.....|......+...+.++..++.       .|++.+++.++    +++++|++++
T Consensus       114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~  186 (407)
T PRK09064        114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES  186 (407)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence            556777777777654  6676666666666555666667776655442       25667766654    3567899999


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      |+||+|.+.+   +++|.++|+++|+++|+||+|+...++..+.......+. ....++++||||.|+++|   ||++++
T Consensus       187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~  260 (407)
T PRK09064        187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS  260 (407)
T ss_pred             CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC
Confidence            9999999998   999999999999999999999854443222111111111 224688999999998888   998875


Q ss_pred             CCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      .        ++++.++....   ++.+.++..+.++.+.++....  ....+++++++++++.+.|+++ ++. +..+. 
T Consensus       261 ~--------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-  327 (407)
T PRK09064        261 A--------ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAA-GIP-VMPNE-  327 (407)
T ss_pred             H--------HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCC-
Confidence            4        57777665431   2334556666666666654221  2334677888999999999887 776 32344 


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +.++++.++..     ....++..+|++++||.+.+...+..   .+++|++++  .++++++++++.|+++++++
T Consensus       328 ~~iv~i~~~~~-----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~  398 (407)
T PRK09064        328 SHIVPVMVGDP-----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL  398 (407)
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            45556655421     13467777787778999988665443   268999994  58999999999999998764

>PRK02948 cysteine desulfurase; Provisional

Probab=99.97  E-value=1.5e-28  Score=233.33  Aligned_cols=334  Identities=12%  Similarity=0.063  Sum_probs=231.7

Q ss_pred             eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC---CCCC----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN---CYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      +-|..+..     .++++.+++++.+.+.....+   .|..    ..-..++|+.+++++      +.++++|++++|++
T Consensus         2 ~yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~t   70 (381)
T PRK02948          2 IYLDYAAT-----TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGGT   70 (381)
T ss_pred             EeccCCCC-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHH
Confidence            44555542     246788899988877532110   1100    112356777778777      56788999999999


Q ss_pred             HHHHHHHHHhc----CCCCeEEeeCCCCCCc---HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCC
Q 014769          118 QAVEVILSVLA----RPGANVLLPRPGWPYY---EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG  190 (419)
Q Consensus       118 ~al~~~~~~l~----~~gd~vlv~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~  190 (419)
                      +++..++.++.    ++||.|++..+.|+++   ...++..|.++..+++++  ++.+|++.+++.++++++++++++|+
T Consensus        71 ~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~  148 (381)
T PRK02948         71 ESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHAN  148 (381)
T ss_pred             HHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECCc
Confidence            99999888875    5689999998777654   344566799999888753  35689999999998888999999999


Q ss_pred             CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769          191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN  270 (419)
Q Consensus       191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  270 (419)
                      ||||.++|   +++|.++|+++|+++++|+++....    ....+..+   +..+++.|+||.++.+|  +|++++++..
T Consensus       149 n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g~----~~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~~~~~~  216 (381)
T PRK02948        149 SEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFGK----LPIDVFEM---GIDSLSVSAHKIYGPKG--VGAVYINPQV  216 (381)
T ss_pred             CCcEeehh---HHHHHHHHHHcCCEEEEEChhhccc----cccCcccC---CCCEEEecHHhcCCCCc--EEEEEEcCCC
Confidence            99999999   7889999999999999998776521    12222223   34478889999988778  8998876531


Q ss_pred             CccchhhHHH-HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE---
Q 014769          271 GIFQKSGIID-SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM---  346 (419)
Q Consensus       271 ~~~~~~~~~~-~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~---  346 (419)
                      ...   .... .........++++.+++.++.++++.. .++.++.++++++.++++.+.|+++ ++.+. ......   
T Consensus       217 ~~~---~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~-~~~~~~~~~  290 (381)
T PRK02948        217 RWK---PVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIE-VEGHSTSCL  290 (381)
T ss_pred             CCC---CcccCCCCCCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEE-EeCCCccCc
Confidence            110   0000 000001124678888888888888753 2567888899999999999999987 55422 211111   


Q ss_pred             --EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------------C-----CCeEEEEee--cCHHHHHH
Q 014769          347 --VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------------L-----KNWLRIAFC--AEPSALKD  403 (419)
Q Consensus       347 --~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------~-----~~~~Ris~~--~~~~~l~~  403 (419)
                        .+.+.++     +. +..++...| .++||.+.+|..+.              .     .+++|+|++  ++++|++.
T Consensus       291 ~~i~~~~~~-----~~-~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~  363 (381)
T PRK02948        291 PHIIGVTIK-----GI-EGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDT  363 (381)
T ss_pred             CCEEEEEeC-----CC-CHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHH
Confidence              1112222     11 355666665 67899999887521              1     368999995  68999999


Q ss_pred             HHHHHHHHHHHHh
Q 014769          404 GLGRMKAFCQRHT  416 (419)
Q Consensus       404 ~l~~l~~~~~~~~  416 (419)
                      +++.|+++++++.
T Consensus       364 l~~~l~~~~~~~~  376 (381)
T PRK02948        364 TIHALETIGNQFY  376 (381)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999987664

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.97  E-value=8.7e-28  Score=226.14  Aligned_cols=322  Identities=14%  Similarity=0.129  Sum_probs=219.0

Q ss_pred             CCChHHHHHHHHHHHhCCCC----C---CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC
Q 014769           58 FRTAVEAEDAIVDAVRSGKF----N---CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP  130 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~----~---~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~  130 (419)
                      -|..+++.+++.+.......    .   .+....-+.++++.+++++      ++  +++++++|+++++..++.+++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~   82 (361)
T cd06452          11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK   82 (361)
T ss_pred             CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence            46778888888776532100    0   1111123568899999987      44  78999999999999999999999


Q ss_pred             CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-------CCccEEEEeCCCCccccCCCHHHHH
Q 014769          131 GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-------KNTAAMVIINPGNPCGNVFTYHHLQ  203 (419)
Q Consensus       131 gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p~nptG~~~~~~~l~  203 (419)
                      ||+|+++.++|++....+...|++++.++.+.+.++.+|++.++++++       ++++++++++|+||||...+   ++
T Consensus        83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~  159 (361)
T cd06452          83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AK  159 (361)
T ss_pred             CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HH
Confidence            999999999988777778889999999988655456899999998875       26789999999999999877   88


Q ss_pred             HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH
Q 014769          204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK  283 (419)
Q Consensus       204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~  283 (419)
                      +|.++|+++|+++|+|++|+....    ......++   ..+++.|+||.++ ++.|+||+++++        ++++.+.
T Consensus       160 ~i~~~~~~~~~~vivD~a~~~g~~----~~~~~~~~---~d~~~~s~~K~l~-~~~~~G~l~~~~--------~~~~~l~  223 (361)
T cd06452         160 KIAKVCHEYGVPLLLNGAYTVGRM----PVSGKELG---ADFIVGSGHKSMA-ASAPIGVLATTE--------EWADIVF  223 (361)
T ss_pred             HHHHHHHHcCCeEEEECCcccCCc----CCCHHHcC---CCEEEecCCcccc-CCCCeEEEEECH--------HHHHHHh
Confidence            999999999999999999985221    11222232   3488999999976 556999999865        4666665


Q ss_pred             hhhcc---------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecC
Q 014769          284 DCLSI---------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLN  353 (419)
Q Consensus       284 ~~~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~  353 (419)
                      .....         ..+.......++...++.. .+.++. ..+..++++++.+.|++++++.++. .+....++.++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~  301 (361)
T cd06452         224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KERVKR-WDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP  301 (361)
T ss_pred             ccccccccceeeeeccccCchHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC
Confidence            43311         0111111222333333221 122333 2233445578889999888877331 2344556666654


Q ss_pred             cccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHHHHH
Q 014769          354 PWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       354 ~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~~~~  412 (419)
                      ....   .......++..+| .++||.+.   ..+...++|++. +.++++++.+++.|+++.
T Consensus       302 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~---~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         302 SFDEIAKKHKRRGYFLYSEL-KKRGIHGI---KPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             CcchhhhhccccchhHHHHH-HHcCceEE---cCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            1000   0001233577777 55699853   223467899999 668999999999998654

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.97  E-value=1.2e-27  Score=224.88  Aligned_cols=327  Identities=16%  Similarity=0.149  Sum_probs=221.9

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCC----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ++.+|+..+   +...+.+|++.+++.+.+++...  ..|..    .....++++.+++++    +  .  ++.++++++
T Consensus         2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~iv~~sg   70 (349)
T cd06454           2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K--EAALVFSSG   70 (349)
T ss_pred             CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C--CCEEEeccH
Confidence            456676664   23345579999999999875321  12222    223356666666665    3  2  245566666


Q ss_pred             HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----CccEEEEeCCCC
Q 014769          117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----NTAAMVIINPGN  191 (419)
Q Consensus       117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~n  191 (419)
                      ++++..++.+++++||.|+++.|+|+.+...+...|.++..++.       .|.+.+++.+++     +++++++++|+|
T Consensus        71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~  143 (349)
T cd06454          71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS  143 (349)
T ss_pred             HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence            78888888888899999999999999888888888988876642       366677776653     456777789999


Q ss_pred             ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769          192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN  270 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  270 (419)
                      |||...+   +++|.++|+++|+++|+|++|+...+..... .........+.+++++|+||.++.+|   ||++.++  
T Consensus       144 ~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~--  215 (349)
T cd06454         144 MDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK--  215 (349)
T ss_pred             CCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH--
Confidence            9999988   8999999999999999999997543321111 00111223345789999999987655   8988754  


Q ss_pred             CccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 014769          271 GIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV  347 (419)
Q Consensus       271 ~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~  347 (419)
                            ++.+.+.....   ...+.++..+.++.+.++....  .+..+++++++++.+.+.|.++ ++.++ .+.++++
T Consensus       216 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~  285 (349)
T cd06454         216 ------ELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVG-GSPSHII  285 (349)
T ss_pred             ------HHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCcE
Confidence                  46665554321   1234556666666666654222  4566788889999999999887 66633 3434444


Q ss_pred             EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769          348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAFC--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~~  411 (419)
                      .++.++..     .+..++...|++ +||.+.++....   ..+++|+++.  .+++++++++++|+++
T Consensus       286 ~~~~~~~~-----~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         286 PPLIGDDP-----AKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             EEEeCCCh-----HHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            44444321     135677777755 499998864321   1479999995  5899999999999864

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=3e-27  Score=221.32  Aligned_cols=334  Identities=19%  Similarity=0.213  Sum_probs=252.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CC--CCCCC----CCCCHHHHHHHHHHHHhhCCCCCC-CCcEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KF--NCYAT----NSGIPPARRAIADYLSRDLPYKLS-ADDVY  111 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~--~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~  111 (419)
                      +.+++-|..+..+     +.|..+.+++.+.....  ..  ..|..    ..-+.+.|+.+++++      +.+ .++|+
T Consensus        20 ~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~------~a~~~~eIv   88 (405)
T COG0520          20 GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL------NADSSDEIV   88 (405)
T ss_pred             CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh------CCCCCCeEE
Confidence            5566777766432     35788889888876421  11  12222    234578899999998      567 48999


Q ss_pred             EcccHHHHHHHHHHHh---cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          112 VTLGCKQAVEVILSVL---ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l---~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      +|.|+|++++.+..++   ..+||+|++....|++    +....+..|++++.++++  +++.++.+.++..++++|++|
T Consensus        89 ft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~~Tklv  166 (405)
T COG0520          89 FTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITPKTKLV  166 (405)
T ss_pred             EeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCCCceEE
Confidence            9999999999999999   5899999999999875    456667779999999986  455799999999999999999


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      .+++.+|.||++.|   +++|+++|+++|+++++|.+++.    +..+..+..++.+   +++.|.+|++..| ..+|.+
T Consensus       167 ais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~afsgHKwl~gP-~GiGvL  235 (405)
T COG0520         167 ALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLAFSGHKWLLGP-TGIGVL  235 (405)
T ss_pred             EEECccccccccch---HHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEEEcccccccCC-CceEEE
Confidence            99999999999999   99999999999999999999987    4445556666665   8888999964444 239999


Q ss_pred             EeeCCCCccchhhHHHHHHhh-----------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          265 VTNDPNGIFQKSGIIDSIKDC-----------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                      ++++        ++.+.+...                       ..-.++++.....++.++++.......++..++.++
T Consensus       236 y~r~--------~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~  307 (405)
T COG0520         236 YVRK--------ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERE  307 (405)
T ss_pred             EEch--------HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHH
Confidence            9976        344444110                       111345666666666777766555667888899999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--------CCeEE
Q 014769          322 SAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------KNWLR  391 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~~R  391 (419)
                      ..+++.+.|+++|++.+..++.  .+-.+.+.++.      ....+++..| .++||.++.|..+..        ...+|
T Consensus       308 L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~------~~~~dv~~~L-~~~gI~vr~g~~ca~p~~~~~~~~~~iR  380 (405)
T COG0520         308 LTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKG------IHPHDVATLL-DEKGIAVRAGHHCAQPLHRLLGVDATIR  380 (405)
T ss_pred             HHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCC------CCHHHHHHHH-HhCCeEEEeccccccHHHHhcCCCCceE
Confidence            9999999999999988554442  33344455553      2466776665 667899999977643        45599


Q ss_pred             EEee--cCHHHHHHHHHHHHHHHH
Q 014769          392 IAFC--AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       392 is~~--~~~~~l~~~l~~l~~~~~  413 (419)
                      +|++  .++|||+.+++.|+++.+
T Consensus       381 ~S~~~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         381 ASLHLYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             EEEeecCCHHHHHHHHHHHHHHhh
Confidence            9995  589999999999998764

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.97  E-value=1.4e-27  Score=227.05  Aligned_cols=325  Identities=15%  Similarity=0.092  Sum_probs=239.3

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR  138 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~  138 (419)
                      +.++.+++++...+    . .|. ..+..++++.+.+.+.+.+|.. ..+.++++++++++++.++..+.++||+|++.+
T Consensus        19 ~~~~~V~~a~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~   91 (401)
T PLN02409         19 NIPERVLRAMNRPN----E-DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR   91 (401)
T ss_pred             CCCHHHHHHhcCCC----C-CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence            46778877765432    2 222 2356788888888888877753 234688899999999999999999999999999


Q ss_pred             CCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769          139 PGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL  212 (419)
Q Consensus       139 p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  212 (419)
                      +.|++.  ...++..|.+++.++.+.+  ..++++.+++++++    +++++++++++||||.++|.+++.++++ |+++
T Consensus        92 ~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~  168 (401)
T PLN02409         92 IGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH  168 (401)
T ss_pred             CCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc
Confidence            999765  4667788999999987543  34789999998875    6899999999999999999555555444 9999


Q ss_pred             CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------
Q 014769          213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------  285 (419)
Q Consensus       213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------  285 (419)
                      |+++|+|++++.    +..+..+..++.   .+++.|.+|++++| .++||+++++        +.++.+...       
T Consensus       169 g~~~vvD~v~s~----g~~~id~~~~~~---D~~~~s~~K~l~~P-~G~G~l~~~~--------~~~~~~~~~~~~~~~~  232 (401)
T PLN02409        169 PALLLVDGVSSI----GALDFRMDEWGV---DVALTGSQKALSLP-TGLGIVCASP--------KALEASKTAKSPRVFF  232 (401)
T ss_pred             CcEEEEEccccc----CCccccccccCc---cEEEEcCccccCcC-CCcceeEECH--------HHHHHHhcCCCCCeec
Confidence            999999999885    222222333333   37777889997553 3699999865        344443321       


Q ss_pred             ----------h-cc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-C--ceEEEEe
Q 014769          286 ----------L-SI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-E--GSMVTMV  350 (419)
Q Consensus       286 ----------~-~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~--~g~~~~~  350 (419)
                                . .. .++++...+.++.++++......+++..++++.+.+.+.+.|+++ +++++... .  .+...++
T Consensus       233 ~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~  311 (401)
T PLN02409        233 DWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAV  311 (401)
T ss_pred             CHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEE
Confidence                      0 01 336677778888888876555678888999999999999999887 77744221 1  2234566


Q ss_pred             ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHHHH
Q 014769          351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .++..     .+..++...+++++||.+.+|......+.|||+. + .+.+++..++..|++++.+.
T Consensus       312 ~~p~~-----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~  373 (401)
T PLN02409        312 VVPEG-----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV  373 (401)
T ss_pred             eCCCC-----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence            66532     2567788888889999999887654578999998 4 58899999999999998865

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=8.5e-28  Score=227.70  Aligned_cols=315  Identities=17%  Similarity=0.174  Sum_probs=223.2

Q ss_pred             CChHHHHHHHHHHHhCCCCC--CCC----C--CCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHHHHHHHHHhcC
Q 014769           59 RTAVEAEDAIVDAVRSGKFN--CYA----T--NSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLAR  129 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~--~Y~----~--~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~al~~~~~~l~~  129 (419)
                      ++++.+.+++.+.+.....+  ...    +  .....++|+.+++++      +.+ +++|++|+|++++++.++.++..
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~g~t~a~~~~~~~l~~   83 (373)
T cd06453          10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI------NAPSPDEIIFTRNTTEAINLVAYGLGR   83 (373)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence            45678888887776432110  000    0  133457888888887      445 67999999999999999999987


Q ss_pred             ---CCCeEEeeCCCCCCc----HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769          130 ---PGANVLLPRPGWPYY----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL  202 (419)
Q Consensus       130 ---~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  202 (419)
                         +||+|++++++|++.    ...++..|.+++.++.+  .++.+|++.+++.+.++++++++++|+||||.+.|   +
T Consensus        84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~  158 (373)
T cd06453          84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V  158 (373)
T ss_pred             cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence               899999999999874    33445678999998875  34578999999999888999999999999999999   7


Q ss_pred             HHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769          203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI  282 (419)
Q Consensus       203 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l  282 (419)
                      ++|.++|+++|+++++|++|+....    ...+...+.   .+++.|++|.++.  .++|++++++        ++++.+
T Consensus       159 ~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~~  221 (373)
T cd06453         159 KEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQDLGC---DFLAFSGHKMLGP--TGIGVLYGKE--------ELLEEM  221 (373)
T ss_pred             HHHHHHHHHcCCEEEEEhhhhcCce----eeeccccCC---CEEEeccccccCC--CCcEEEEEch--------HHhhcC
Confidence            8999999999999999999875321    112222222   3667789999665  5589998865        344443


Q ss_pred             Hhhhc---------------------c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014769          283 KDCLS---------------------I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN  340 (419)
Q Consensus       283 ~~~~~---------------------~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  340 (419)
                      +....                     + ..+++.....++.++++......++++.++.+++++++.+.|++++++.++.
T Consensus       222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  301 (373)
T cd06453         222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG  301 (373)
T ss_pred             CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence            32210                     0 1245555555555555543334567777888889999999998887776432


Q ss_pred             CC-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCCeEEEEee--cCHHHHHHHHHHH
Q 014769          341 KP-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKNWLRIAFC--AEPSALKDGLGRM  408 (419)
Q Consensus       341 ~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~~Ris~~--~~~~~l~~~l~~l  408 (419)
                      .+ ..+.++++.++.      .+..++.+.| .++||.+.+|..+        +.++++|++++  .++++++++++.|
T Consensus       302 ~~~~~~~~~~~~~~~------~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         302 DAEDRAGVVSFNLEG------IHPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             CccccCCeEEEEECC------cCHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence            21 124455666653      2456676666 5689999887653        23679999996  5899999998764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.97  E-value=1.9e-27  Score=225.67  Aligned_cols=330  Identities=12%  Similarity=0.096  Sum_probs=233.7

Q ss_pred             CChHHHHHHHHHHHhCCC-----CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-----
Q 014769           59 RTAVEAEDAIVDAVRSGK-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-----  128 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-----  128 (419)
                      ++++.+++++.+.+....     ...|+. .+...+++++++++.. .+. .++++|++|+|++++++.++.++.     
T Consensus        10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~   86 (382)
T TIGR03403        10 MLDPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEIL   86 (382)
T ss_pred             CCCHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcc
Confidence            466789999988775421     112332 4567888888888753 221 267899999999999999998762     


Q ss_pred             CC-CCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769          129 RP-GANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE  204 (419)
Q Consensus       129 ~~-gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  204 (419)
                      ++ ++.|++..+.|+.+.   ..++..|.+++.+++++  ++.+|++.++++++++++++++++|+||||.++|   +++
T Consensus        87 ~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~  161 (382)
T TIGR03403        87 KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKE  161 (382)
T ss_pred             cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHH
Confidence            45 478999987776554   33556799999998753  3568999999999888899999999999999999   778


Q ss_pred             HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh
Q 014769          205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD  284 (419)
Q Consensus       205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~  284 (419)
                      |.++|+++|+++++|++++..    ..+..+..++.   .+++.|++|.++.+|  +|+++++....+.  +.+......
T Consensus       162 I~~la~~~g~~~ivD~a~~~g----~~~~~~~~~~~---D~~~~s~~K~~gp~G--~g~l~vr~~~~~~--p~~~g~~~~  230 (382)
T TIGR03403       162 IGEICKERGVLFHTDAVQAIG----KIPVDVQKAGV---DFLSFSAHKFHGPKG--VGGLYIRKGVELT--PLFHGGEHM  230 (382)
T ss_pred             HHHHHHHcCCEEEEechhhcC----CCccCccccCC---CEEEEcchhhCCCCc--eEEEEECCCCCCC--CcccCCCCC
Confidence            999999999999999998752    11122222222   277889999877677  6888876532111  111000000


Q ss_pred             hhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ceEEEEeecCcccccCCC
Q 014769          285 CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE---GSMVTMVKLNPWLLEDIN  361 (419)
Q Consensus       285 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~~~~~~~~~~~~  361 (419)
                      .....++++.+.+.++..+++.. .++++...+++++.++++.+.|++++++.++ .+.   .+.++.+.++.      .
T Consensus       231 ~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~------~  302 (382)
T TIGR03403       231 GGRRSGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIKG------V  302 (382)
T ss_pred             CCcccCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCCEEEEEeCC------C
Confidence            01124678888888888888653 3457777889999999999999988888744 332   13355555542      1


Q ss_pred             CHHHHHHHHHHhcCeEeecCCCCC--------------C-----CCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          362 DDIEFALKLAKEESVIVTPGIYVG--------------L-----KNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       362 ~~~~~~~~ll~~~gv~v~~g~~~~--------------~-----~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +..++...| .++||.+..|..+.              .     .+.+|+|++  ++++|++++++.|++++++++
T Consensus       303 ~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~  377 (382)
T TIGR03403       303 EGEAMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR  377 (382)
T ss_pred             CHHHHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            456666664 77899999876542              1     257999994  689999999999999887754

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.97  E-value=2.1e-27  Score=225.19  Aligned_cols=324  Identities=14%  Similarity=0.118  Sum_probs=226.1

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCC---------CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATN---------SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-  128 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-  128 (419)
                      ++++.+++++.+.+....  .++..         .-+.++|+.+++++      +.++++|++|+|++++++.++.++. 
T Consensus        10 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~~   81 (379)
T TIGR03402        10 RVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSALA   81 (379)
T ss_pred             CCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence            567889999888765321  12111         12346667777776      5678899999999999999988764 


Q ss_pred             --CCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769          129 --RPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ  203 (419)
Q Consensus       129 --~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  203 (419)
                        .+||.|++...+|+.+..   .++..|.+++.+++++  ++.+|++.+++.++++++++++++++||||.++|   ++
T Consensus        82 ~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~  156 (379)
T TIGR03402        82 AQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IE  156 (379)
T ss_pred             hcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HH
Confidence              356889998888876543   3444699998888643  3468999999999888999999999999999999   77


Q ss_pred             HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH
Q 014769          204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK  283 (419)
Q Consensus       204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~  283 (419)
                      +|.++|+++|+++++|++++.    |..+..+...+.   .+++.|.+|.++.+|  +|++++++... . .|.+.....
T Consensus       157 ~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~---D~~~~s~~K~~gp~G--~g~l~v~~~~~-~-~p~~~g~~~  225 (379)
T TIGR03402       157 EIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNI---DMLSLSGHKLHGPKG--VGALYIRKGTR-F-RPLLRGGHQ  225 (379)
T ss_pred             HHHHHHHHcCCEEEEECcccc----cccccCcccCCC---CEEEEcHHHcCCCCc--eEEEEECCCCC-C-CCcccCCcc
Confidence            899999999999999999985    322233333333   377778889765556  88888765321 1 111110000


Q ss_pred             hhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC----ceEEEEeecCccccc
Q 014769          284 DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPE----GSMVTMVKLNPWLLE  358 (419)
Q Consensus       284 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~----~g~~~~~~~~~~~~~  358 (419)
                      ......++++.+...++.++++.. .+++++..++.+++++.+.+.|++ ++++.....+.    +...+++...     
T Consensus       226 ~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  299 (379)
T TIGR03402       226 ERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYI-----  299 (379)
T ss_pred             CCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCC-----
Confidence            001124566777777777777653 346777778889999999999985 77766332221    1233444321     


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                         +..++...| .++||.+.+|..|..                   .+.+|+|++  ++++||+++++.|++++++++
T Consensus       300 ---~~~~~~~~l-~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~  374 (379)
T TIGR03402       300 ---EGEAILLLL-DMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR  374 (379)
T ss_pred             ---CHHHHHHhh-ccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence               456676655 778999999876532                   268999995  689999999999999988764

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.96  E-value=2.6e-27  Score=223.09  Aligned_cols=318  Identities=16%  Similarity=0.137  Sum_probs=222.9

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC--cEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVL  135 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l~~~gd~vl  135 (419)
                      ..+++.+++++...... ....|.  .-..++|+.+++++      +++++  .|++++|+++++..++.++..++|+++
T Consensus         8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~------~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi   78 (355)
T TIGR03301         8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALA------GGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLL   78 (355)
T ss_pred             CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHh------cCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEE
Confidence            35678888888763211 111233  23467777777776      34443  688899999999999999988888887


Q ss_pred             eeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC--ccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN--TAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       136 v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      +..+.+++  +...++..|.++..++.+  .++.+|++.++++++++  .+.+++++++||||...+   +++|.++|++
T Consensus        79 ~~~~~~~~~~~~~~a~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~  153 (355)
T TIGR03301        79 VLINGAYGERLAKICEYLGIPHTDLNFS--EYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARS  153 (355)
T ss_pred             EECCCchhhHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHH
Confidence            77666554  356677889999888864  34578999999988643  456778899999999998   8999999999


Q ss_pred             CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhh-----
Q 014769          212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-----  285 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-----  285 (419)
                      +++++|+|++++...    ...++..+   +..++++|++|++ +.+|  +||+++++        ++++.+...     
T Consensus       154 ~~~~livD~~~s~g~----~~~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~  216 (355)
T TIGR03301       154 HGAVLIVDAMSSFGA----IPIDIEEL---DVDALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARSLY  216 (355)
T ss_pred             cCCEEEEEeccccCC----cccchhhc---CccEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCCce
Confidence            999999999877532    12223333   2347889999974 4455  79999875        455544410     


Q ss_pred             -------------hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceEEEE
Q 014769          286 -------------LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKP--EGSMVTM  349 (419)
Q Consensus       286 -------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~  349 (419)
                                   ....++++...+.++.++++....+ ++++..++++++++.+.+.|+++ ++.++..+  .++.++|
T Consensus       217 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~  295 (355)
T TIGR03301       217 LDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVS  295 (355)
T ss_pred             eeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEE
Confidence                         0123456777777777777653323 36778888999999999999887 66533222  3456778


Q ss_pred             eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHH
Q 014769          350 VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~  412 (419)
                      +.++...   ..+..++..++ .++||.+.+|..+.. +++|+++ + .++++++++++.|++++
T Consensus       296 ~~~~~~~---~~~~~~~~~~l-~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~~  355 (355)
T TIGR03301       296 FLYPDDP---DFDFDDFYQEL-KERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDAL  355 (355)
T ss_pred             EECCCCC---cchHHHHHHHH-HHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence            8776411   01234566555 677999999876543 7999998 3 58999999999998753

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.96  E-value=2.5e-27  Score=224.79  Aligned_cols=327  Identities=14%  Similarity=0.126  Sum_probs=228.8

Q ss_pred             CCChHHHHHHHHHHHhCCC----CCCCCC----CCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHHHHHHHHHhc
Q 014769           58 FRTAVEAEDAIVDAVRSGK----FNCYAT----NSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLA  128 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~----~~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~al~~~~~~l~  128 (419)
                      +++++.+++++.+.+....    ...|..    ..+..++|+.+++++      +.+ +++|++|+|++++++.++.++.
T Consensus        10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~   83 (376)
T TIGR01977        10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF------NAPSSAHVVFTNNATTALNIALKGLL   83 (376)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh------CcCCCCeEEEeCCHHHHHHHHHHhcc
Confidence            4667888999888776532    112332    245678889999988      333 3589999999999999999999


Q ss_pred             CCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769          129 RPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE  204 (419)
Q Consensus       129 ~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  204 (419)
                      ++||+|++..++|+.+.    ..++..|.+++.++.+.  ++.+|++.++++++++++++++++|+||||.++|   +++
T Consensus        84 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~  158 (376)
T TIGR01977        84 KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEE  158 (376)
T ss_pred             CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHH
Confidence            99999999999998754    34455699988888653  4568999999999888899999999999999999   788


Q ss_pred             HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh-------
Q 014769          205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG-------  277 (419)
Q Consensus       205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~-------  277 (419)
                      |.++|+++|+++|+|++++....    ...+...+.   .+++.|++|+++.|. .+|.+++++...+.....       
T Consensus       159 i~~l~~~~~~~livD~a~~~g~~----~~~~~~~~~---D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~  230 (376)
T TIGR01977       159 IGELAQENGIFFILDAAQTAGVI----PIDMTELAI---DMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHS  230 (376)
T ss_pred             HHHHHHHcCCEEEEEhhhccCcc----CCCchhcCC---CEEEecccccccCCC-CceEEEEcCCcCcCceecCCCcccc
Confidence            99999999999999999986332    122222222   377889999865432 367776655321100000       


Q ss_pred             -HHHHHHhh--hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEEEEe
Q 014769          278 -IIDSIKDC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSMVTMV  350 (419)
Q Consensus       278 -~~~~l~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~  350 (419)
                       ........  ....++++.....++.++++.......+...++.+++.+.+.+.|.+++++..+ .|.    .+..+++
T Consensus       231 ~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~v~~  309 (376)
T TIGR01977       231 ALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY-GPADPANRVGVVSF  309 (376)
T ss_pred             ccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCccccCCeEEE
Confidence             00000000  001235566666666667765444456677888899999999999887777633 321    2345566


Q ss_pred             ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----------CCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769          351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----------LKNWLRIAFC--AEPSALKDGLGRMKA  410 (419)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----------~~~~~Ris~~--~~~~~l~~~l~~l~~  410 (419)
                      .++.      .+..++...|.+++||.+.+|..+.          ..+.+|+++.  .++++++.+++.|++
T Consensus       310 ~~~~------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       310 TVEG------IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             EECC------CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            6642      2456777777555699999887553          2478999994  689999999999975

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.96  E-value=4.1e-27  Score=211.94  Aligned_cols=330  Identities=15%  Similarity=0.123  Sum_probs=245.2

Q ss_pred             CCChHHHHHHHHHHHhCC--C---CCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh--c
Q 014769           58 FRTAVEAEDAIVDAVRSG--K---FNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL--A  128 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~--~---~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l--~  128 (419)
                      .|+.|++.++|...+...  +   .+.|+.  ...+.+.|+.||+.+      ++++++|++|+|+||+.+.++...  .
T Consensus        11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a   84 (386)
T COG1104          11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA   84 (386)
T ss_pred             CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence            467889999998887653  1   112221  233578889999998      788999999999999999998873  2


Q ss_pred             C----CCCeEEeeCCCCCCcHHHHhhc---CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769          129 R----PGANVLLPRPGWPYYEGIAQRK---QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       129 ~----~gd~vlv~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      .    +|..|++..-.|+...+.++.+   |+++.+++++.  +..+|++.|++++++++.+|.+...||.||++.|   
T Consensus        85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp---  159 (386)
T COG1104          85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTIQP---  159 (386)
T ss_pred             hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---
Confidence            2    5789999999999887777666   99999999864  4579999999999999999999999999999999   


Q ss_pred             HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769          202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS  281 (419)
Q Consensus       202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  281 (419)
                      +++|.++|+++++++++|.+++.    |+-+..+..+..+   +...|-+|.+|..|  +|.+++++.-.+.  |.+...
T Consensus       160 I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~~~~~~~--p~i~GG  228 (386)
T COG1104         160 IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVRPGVRLE--PLIHGG  228 (386)
T ss_pred             HHHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEECCCCccC--ceeccC
Confidence            99999999999999999999997    5544445444433   55668889988888  8888874421111  111111


Q ss_pred             HHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCC--CCceEEEEeecCccccc
Q 014769          282 IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI-PCISCPNK--PEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       282 l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~--p~~g~~~~~~~~~~~~~  358 (419)
                      .+.....+++.+.+...+...+++. ..+.++....++.+.++++.+.|.+. |.+.....  +.-...+.+.++..   
T Consensus       229 gQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv---  304 (386)
T COG1104         229 GQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV---  304 (386)
T ss_pred             cCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC---
Confidence            1111123566777777777777765 34667778888999999999999874 66543222  22344555556531   


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                         ..+.+... |..+||.++.|+.+..                   .+.+|+|++  ++++|++.+++.+.+++++++.
T Consensus       305 ---~gE~ll~~-L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~  380 (386)
T COG1104         305 ---EGESLLLA-LDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE  380 (386)
T ss_pred             ---cHHHHHHh-ccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence               34555544 4778999999998853                   368999995  6899999999999999998764

>PRK07049 methionine gamma-lyase; Validated

Probab=99.96  E-value=6.6e-27  Score=222.37  Aligned_cols=230  Identities=15%  Similarity=0.182  Sum_probs=174.4

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g  152 (419)
                      +.+|+++ ....|++.||++.        ..+++++++|+++++..++.+++++||.|+++.|+|.++...+    ...|
T Consensus        77 y~R~~~P-t~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G  147 (427)
T PRK07049         77 YSRFNHP-NSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG  147 (427)
T ss_pred             ccCCCCc-CHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence            4567764 4689999999987        2457899999999999999999999999999999999986653    4568


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhc-----CCccEEEEeCCCCccccCCCHHHHHHHHHHHHh---CCCeEEEcccccc
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALAD-----KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK---LRVMVVADEVYGH  224 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~De~~~~  224 (419)
                      ++++.++.      ..|.+.+++++.     +++++|++++|+||||.+++.+++.+|++.|.+   +++++|+|++|..
T Consensus       148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~  221 (427)
T PRK07049        148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG  221 (427)
T ss_pred             cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence            87665541      245666665553     468999999999999999998888888887654   6899999999875


Q ss_pred             cccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHH
Q 014769          225 LTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQ  302 (419)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~  302 (419)
                      ..+.    .++ ..   +..+++.|+||.++ .+|+|+||++++.        ++++.++.... .....++..+.++..
T Consensus       222 ~~~~----~pl-~~---g~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r  285 (427)
T PRK07049        222 PVFQ----KPL-EH---GADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGR  285 (427)
T ss_pred             cccC----Ccc-cc---CCCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence            4321    122 22   23488899999998 5999999999754        57777776643 345577777877766


Q ss_pred             HHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          303 ILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       303 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      .|+.     +..+.++..++++.+.+.|+++|++..|..|
T Consensus       286 ~L~t-----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp  320 (427)
T PRK07049        286 SLET-----LVLRMERANRNARAVAEFLRDHPKVEKLHYL  320 (427)
T ss_pred             CCCh-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            6643     5555667788999999999988776544444

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.96  E-value=7.1e-27  Score=221.38  Aligned_cols=338  Identities=14%  Similarity=0.134  Sum_probs=230.6

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||..|+...... ..+|.+.+++.++++....  .+ ..+..+++..+++++.+..+    .+.+++++++++
T Consensus        26 ~~G~~~lD~~s~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~   97 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLG-HCHPTVTKAVQEQLDDIWH--VS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAE   97 (377)
T ss_pred             CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccc--cc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence            4588999999996443323 2679999999999875321  22 23457899999999976433    358999999999


Q ss_pred             HHHHHHHHhc-CCC-CeEEeeCCCCCCcHHHHhh-cCCEEE---EEeccCCCCc--ccChHHHHHhhcCCccEEEEeCCC
Q 014769          119 AVEVILSVLA-RPG-ANVLLPRPGWPYYEGIAQR-KQVEVR---HFDLLPERNW--EVDLDAVEALADKNTAAMVIINPG  190 (419)
Q Consensus       119 al~~~~~~l~-~~g-d~vlv~~p~~~~~~~~~~~-~g~~~~---~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~i~~p~  190 (419)
                      ++..+++... .+| ++|++.+++|++....... .+....   ..++.++..+  -.|++.+++.+.++++++++..++
T Consensus        98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~  177 (377)
T PRK02936         98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ  177 (377)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence            9999999643 244 6799999999865432222 221110   1111111000  116888999888777777877778


Q ss_pred             CccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769          191 NPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP  269 (419)
Q Consensus       191 nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  269 (419)
                      +++|.. .+.+++++|.++|++||+++|+||+|.++.+.|... .+..++..+.+   .++||.++ +|+|+||+++++ 
T Consensus       178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~~-  251 (377)
T PRK02936        178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGKK-  251 (377)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEcH-
Confidence            988876 688999999999999999999999999877666432 22222222223   37899986 899999999865 


Q ss_pred             CCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCC-CCCceE
Q 014769          270 NGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPN-KPEGSM  346 (419)
Q Consensus       270 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~-~p~~g~  346 (419)
                             ++.+.+.... ..+++.+++.|.++.++|+...   .++..++++++.+.+++.|++ ++++..+. ....|+
T Consensus       252 -------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~  321 (377)
T PRK02936        252 -------ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGL  321 (377)
T ss_pred             -------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecce
Confidence                   5777665432 3345678999999999987632   123345556666666666654 22222111 123578


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                      ++|+.++.       +...+.. .+.++||.+.|+.    .+++|+++  ..+++++++++++|++++
T Consensus       322 ~~~i~~~~-------~~~~~~~-~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        322 MIGIECTE-------EVAPVIE-QLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             EEEEEecc-------hHHHHHH-HHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            89998863       2445555 4477899998853    47999996  578999999999998763

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.96  E-value=1.5e-26  Score=220.89  Aligned_cols=333  Identities=16%  Similarity=0.115  Sum_probs=225.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +.++++|+..+   +..+..+|++++++.++++.....      .+....-..++++.+++++      +  .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~------g--~~~~~~~~  112 (406)
T PRK13393         44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH------G--KEAALLFT  112 (406)
T ss_pred             CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHh------C--CCcEEEeC
Confidence            46789999887   345667899999999998753211      1111112356777777776      2  24566666


Q ss_pred             cHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeC
Q 014769          115 GCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~  188 (419)
                      ++++++..++..+..  +||.|+.....|......+...|.++..++.       .|++.+++.+.    +++++|++.+
T Consensus       113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~  185 (406)
T PRK13393        113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES  185 (406)
T ss_pred             CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence            667789999887765  6777777777776666666777777666543       25566655543    2467788889


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      ++|++|.+.|   +++|.++|+++++++|+||+|+...++..+.......+. ....++++||||.++++|   ||++++
T Consensus       186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~  259 (406)
T PRK13393        186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS  259 (406)
T ss_pred             CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence            9999999999   899999999999999999999855444322111111111 123577899999998888   998875


Q ss_pred             CCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      .        ++++.++....   ++.+.++..+.++.++++.....  ...+.+++++.+++.+.|+++ ++.++ .+.+
T Consensus       260 ~--------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~  327 (406)
T PRK13393        260 A--------ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKA-GIPHL-PNPS  327 (406)
T ss_pred             H--------HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCC
Confidence            4        56777765432   23455666677777777653222  123456788888999999876 66633 4444


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      . ++.+.++..     .+..++...|++++||.+.++..+..   ..++|+++.  .++++++++++.|++++.++
T Consensus       328 ~-i~~v~~~~~-----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        328 H-IVPVMVGDP-----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             C-eEEEEeCCH-----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence            4 444444321     12456777776667999988765443   368999994  68999999999999988754

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.96  E-value=1.4e-26  Score=218.28  Aligned_cols=316  Identities=14%  Similarity=0.126  Sum_probs=221.9

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCC--CcEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSA--DDVYVTLGCKQAVEVILSVLARPGANV  134 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~t~g~~~al~~~~~~l~~~gd~v  134 (419)
                      ..++.+++++....     ..+.+  ..-+.++|+.+++++      +.++  +.|++|+|++++++.++.++..+||.+
T Consensus        13 ~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~r~~la~l~------~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~v   81 (363)
T TIGR02326        13 TTSRTVKEAMLFDW-----CTWDSDYNIVVEQIRQQLLALA------TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKL   81 (363)
T ss_pred             CCCHHHHHHhCCCC-----CCCChHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeE
Confidence            45666666654432     12222  112345667777766      4444  479999999999999999998899988


Q ss_pred             EeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769          135 LLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNVFTYHHLQEIAEMAR  210 (419)
Q Consensus       135 lv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~  210 (419)
                      ++..+++++.  ...++..|.+++.++.++  ++.+|++.++++++.  +++.+.+++++||||+.+|   +++|.++|+
T Consensus        82 lv~~~~~~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~  156 (363)
T TIGR02326        82 LVVINGAYGARIVQIAEYLGIPHHVVDTGE--VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAH  156 (363)
T ss_pred             EEEeCChhhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHH
Confidence            8877766654  356788899999888753  456899999998875  3466788999999999999   889999999


Q ss_pred             hCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHh-----
Q 014769          211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-----  284 (419)
Q Consensus       211 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~-----  284 (419)
                      ++|+++|+|++++.    |..+.++..++.   .++++|++|++ +.+|  +||+++++        +.++.+..     
T Consensus       157 ~~g~~livD~~~~~----g~~~~~~~~~~~---D~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~  219 (363)
T TIGR02326       157 RHGKVTIVDAMSSF----GGIPIDIAELHI---DYLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSL  219 (363)
T ss_pred             HcCCEEEEEccccc----cCcccchhhcCc---cEEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCce
Confidence            99999999998874    222233444443   37888999985 3345  79999865        23333211     


Q ss_pred             ----------h---h-ccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceEE
Q 014769          285 ----------C---L-SIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKP--EGSMV  347 (419)
Q Consensus       285 ----------~---~-~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~  347 (419)
                                .   . ...++++.+.+.++.++++....+ .+++..++++++++++++.|+++ ++..+..+  ..+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~  298 (363)
T TIGR02326       220 SLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPII  298 (363)
T ss_pred             eecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceE
Confidence                      0   0 112356777777777777653333 46778899999999999999887 66633222  34556


Q ss_pred             EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHH
Q 014769          348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~  413 (419)
                      .++.++...   ..+..++...| +++||.+.||..+ ..+++|+++ + .+.++++++++.|++++.
T Consensus       299 ~~~~~~~~~---~~~~~~v~~~L-~~~gi~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~~l~  361 (363)
T TIGR02326       299 TSFYSPEDP---DYRFADFYQRL-KEQGFVIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGKAMY  361 (363)
T ss_pred             EEEECCCCC---CCCHHHHHHHH-HHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence            677776410   01345666665 6779999999765 357999996 4 588999999999998763

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.96  E-value=1.8e-26  Score=220.54  Aligned_cols=330  Identities=17%  Similarity=0.175  Sum_probs=223.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT-----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +.++++|+.|+|.    ++.++.+.++..+.  .. ...|.+     ..|..++++++++++.+.+|.  +.++++++++
T Consensus        19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~   89 (398)
T cd00613          19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE   89 (398)
T ss_pred             ccCcccccccccC----CcCcHHHHHHhccc--cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence            5567999999964    45566665555444  22 235555     689999999999999988774  3446767665


Q ss_pred             HH-HHHHHHHHHhcCC--CCeEEeeCCCCCCcHHHHhhcC----CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC
Q 014769          116 CK-QAVEVILSVLARP--GANVLLPRPGWPYYEGIAQRKQ----VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN  188 (419)
Q Consensus       116 ~~-~al~~~~~~l~~~--gd~vlv~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~  188 (419)
                      ++ ++...++.++..+  ||+|++++|.|+.+...+...+    .+++.+++.+  ++.+|++++++++.+++++|++++
T Consensus        90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~  167 (398)
T cd00613          90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY  167 (398)
T ss_pred             hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence            54 5555555566665  9999999999999888777777    8888887643  346899999999988889999998


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEE
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWL  264 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~  264 (419)
                      |+ |||.+.  +.+++|.++|+++|+++|+|+++.....    ......+   +..+++.|+||++ +|    |+++||+
T Consensus       168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~----~~~~~~~---~~d~~~~s~~K~~-~p~g~Ggp~~g~l  236 (398)
T cd00613         168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG----LKPPGEY---GADIVVGNLQKTG-VPHGGGGPGAGFF  236 (398)
T ss_pred             CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccC----CCChHHc---CCCEEEeeccccC-CCCCCCCCceeEE
Confidence            85 899985  4569999999999999999998764321    1111122   2348899999997 65    7899999


Q ss_pred             EeeCCCCccchhhHHHHHHh------------------------------hhccccCCchHHHHHHHHHHcccchHHHHH
Q 014769          265 VTNDPNGIFQKSGIIDSIKD------------------------------CLSIYSDIPTFIQGAIPQILEKTKEDFFCK  314 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~------------------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  314 (419)
                      ++++        ++++.+..                              ......+.+.....++...+.......+++
T Consensus       237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~  308 (398)
T cd00613         237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKE  308 (398)
T ss_pred             EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHH
Confidence            9865        23333210                              001111222223223333333333567888


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE--EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEE
Q 014769          315 LIDTLRESAEICYDGVKEIPCISCPNKPEGSMV--TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRI  392 (419)
Q Consensus       315 ~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ri  392 (419)
                      ..++++++++++.+.|+++++..   .+.+..+  ++++++...   ..+..+++..| .++||.+.... ....+.+|+
T Consensus       309 ~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~v~~~~~~~~---~~~~~~~~~~L-~~~gi~~~~~~-~~~~~~lRi  380 (398)
T cd00613         309 IAERAHLNANYLAKRLKEVGGVL---PFNGPFFHEFVLRLPPLY---GIRAEDLAKAL-IDGGFHAPTMY-LPVDGTLMI  380 (398)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcc---cCCCCeeEEEEEEcCCcc---hHHHHHHHHhh-hhcCccccccc-cCCCCeEEE
Confidence            89999999999999999874433   2333323  456665310   01356677776 56799764422 223578999


Q ss_pred             Ee--ecCHHHHHHHHHHH
Q 014769          393 AF--CAEPSALKDGLGRM  408 (419)
Q Consensus       393 s~--~~~~~~l~~~l~~l  408 (419)
                      ++  ..+++||+++++.|
T Consensus       381 s~~~~~t~edid~~~~~L  398 (398)
T cd00613         381 EPTETETKEELDALLEAL  398 (398)
T ss_pred             EcCCCCCHHHHHHHHHhC
Confidence            99  36899999998764

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.96  E-value=3.4e-26  Score=216.75  Aligned_cols=338  Identities=13%  Similarity=0.097  Sum_probs=227.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-------FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      ....||+.   |-+.. .|+++++++++.+......       ...+.......++|+.+++++      +.  ++++++
T Consensus        17 ~~~~~~~~---~~~~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~------g~--~~~~~~   84 (387)
T PRK09331         17 EEEFINLD---PIQRG-GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL------GM--DEARVT   84 (387)
T ss_pred             cccccccC---hhhcC-CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh------CC--CcEEEe
Confidence            45566664   33332 4678889999988763211       011112234689999999998      33  468899


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-------CccEEEE
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-------NTAAMVI  186 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i  186 (419)
                      +|+++++..++.+++++||+|+++.++|.+....++..|++++.++...+.++.+|++.+++++++       ++++|++
T Consensus        85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l  164 (387)
T PRK09331         85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL  164 (387)
T ss_pred             CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence            999999999999999999999999999988777788899999998874334567999999988753       5788999


Q ss_pred             eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      ++|+||||...+   +++|.++|+++|+++++|++|+...    .+.+...++.   .+++.|++|+++ .+.++||+++
T Consensus       165 ~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~----~~~~~~~~g~---D~~~~s~~K~l~-~~~~~G~l~~  233 (387)
T PRK09331        165 THVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGR----MPVDGKKLGA---DFIVGSGHKSMA-ASAPSGVLAT  233 (387)
T ss_pred             ECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCC----cCCCHHHcCC---CEEEeeCccccc-CCCCEEEEEE
Confidence            999999999988   9999999999999999999998632    1122223332   378899999965 4568999988


Q ss_pred             eCCCCccchhhHHHHHHhhhc---------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          267 NDPNGIFQKSGIIDSIKDCLS---------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      ++        ++++.+.....         +..+.......++...++.. .+.. +..++..++.+++++.|++++|++
T Consensus       234 ~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~  303 (387)
T PRK09331        234 TE--------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHV-VERV-KRWDEEVKKARWFVDELEKIEGFK  303 (387)
T ss_pred             CH--------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCEE
Confidence            65        45555543210         11112111222222223221 1122 234455677778999999988887


Q ss_pred             CCCC-CCceEEEEeecCccc--c-cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHHHHH
Q 014769          338 CPNK-PEGSMVTMVKLNPWL--L-EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       338 ~~~~-p~~g~~~~~~~~~~~--~-~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~~~~  412 (419)
                      ++.. +....++.+..+...  . .......++.+.| +++||...+.   +....+|+.. +.++++++.+++.|++++
T Consensus       304 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~  379 (387)
T PRK09331        304 QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIA  379 (387)
T ss_pred             EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHH
Confidence            3311 233445445544110  0 0011234566666 6779984432   2355678887 779999999999999988


Q ss_pred             HHH
Q 014769          413 QRH  415 (419)
Q Consensus       413 ~~~  415 (419)
                      +++
T Consensus       380 ~~~  382 (387)
T PRK09331        380 EKY  382 (387)
T ss_pred             Hhc
Confidence            764

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.96  E-value=1.3e-26  Score=222.81  Aligned_cols=348  Identities=16%  Similarity=0.128  Sum_probs=229.1

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|..+|||..|..... ....+|.+.+++.+++...  ..|+...+..++...+++.+.+..+.  +.+++++++|+++
T Consensus        33 ~dG~~~id~~~~~~~~~-lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgse  107 (413)
T cd00610          33 VDGNRYLDFLSGIGVLN-LGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTE  107 (413)
T ss_pred             CCCCEEEEcCccHHhhc-cCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHH
Confidence            35889999998754321 1126789999999998653  24544334456666666666665442  5789999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCC----CCcccChHHHHHhhcC
Q 014769          119 AVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPE----RNWEVDLDAVEALADK  179 (419)
Q Consensus       119 al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~~~~~l~~~~~~  179 (419)
                      ++..+++.+.  .+++.|++.+++|+++.......+.             ++..++.++.    ..+..|++.+++.+++
T Consensus       108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  187 (413)
T cd00610         108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE  187 (413)
T ss_pred             HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence            9999999874  4689999999999986544433221             2344443211    1234588889888875


Q ss_pred             --CccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769          180 --NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL  255 (419)
Q Consensus       180 --~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  255 (419)
                        +...+++++| +|++|..+ +.+++++|.++|+++++++|+||+|+++...+... ....++...+   +.|+||.++
T Consensus       188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~d---~~t~sK~l~  263 (413)
T cd00610         188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEPD---IVTLGKGLG  263 (413)
T ss_pred             CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCCC---eEEEccccc
Confidence              3445566666 56779865 78889999999999999999999999764444321 1112222212   348899976


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHH--Hhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSI--KDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l--~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      . |+|+||+++++        ++++.+  .... ..+++.+++.+.++.++++....   .+..++++++.+.+.+.|++
T Consensus       264 ~-g~~~g~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~  331 (413)
T cd00610         264 G-GLPLGAVLGRE--------EIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRE  331 (413)
T ss_pred             C-ccccEEEEEcH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence            5 89999999864        577765  2222 23456777888887777764221   24456666677777776665


Q ss_pred             CCC-CCCC-CCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHH
Q 014769          333 IPC-ISCP-NKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGL  405 (419)
Q Consensus       333 ~~~-~~~~-~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l  405 (419)
                      +.. ...+ .....|.++++.++....   ........+...+ .++||.+.|+.    .+++|+++.  .+++++++++
T Consensus       332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~  406 (413)
T cd00610         332 LAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSG----GNVIRLLPPLIITEEEIDEGL  406 (413)
T ss_pred             HHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHH
Confidence            311 1111 123456777887754200   0001235566665 56799999975    578999884  5899999999


Q ss_pred             HHHHHHH
Q 014769          406 GRMKAFC  412 (419)
Q Consensus       406 ~~l~~~~  412 (419)
                      ++|++++
T Consensus       407 ~~l~~~l  413 (413)
T cd00610         407 DALDEAL  413 (413)
T ss_pred             HHHHHhC
Confidence            9998763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.96  E-value=2.9e-26  Score=218.59  Aligned_cols=337  Identities=16%  Similarity=0.139  Sum_probs=226.0

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|..+|||..|.....-.. .+|.+.+++.++++....  +... ...+....+++.+.+..    ..+.+++++++++
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~----~~~~~~~~~sGse  108 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWH--ISNV-FTNEPALRLAKKLIDAT----FAERVFFANSGAE  108 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCc--ccCc-cCCHHHHHHHHHHHhhC----CCCEEEEeCchHH
Confidence            45888999988733222222 689999999999875321  1111 11222334444444322    2369999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHHHhh
Q 014769          119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVEALA  177 (419)
Q Consensus       119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~~  177 (419)
                      |+..+++....        ..++|+..+.+|++....+...+..             +..++       -.|++.+++.+
T Consensus       109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l  181 (403)
T PRK05093        109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-------FNDLAAVKAVI  181 (403)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-------CCCHHHHHHHh
Confidence            99999986521        2367888888888764333222111             11111       12788898888


Q ss_pred             cCCccEEEEeCCCCccccCC--CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769          178 DKNTAAMVIINPGNPCGNVF--TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL  255 (419)
Q Consensus       178 ~~~~~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  255 (419)
                      .+++++|++. |.||+|-++  +.+++++|.++|++||+++|+||+|.++.++|... +....+..+.   +.||||.++
T Consensus       182 ~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l~  256 (403)
T PRK05093        182 DDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKALG  256 (403)
T ss_pred             cCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEeccccc
Confidence            7665555554 888887654  89999999999999999999999999887766532 2222222222   458999976


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                       +|+|+||+++++        ++++.+... ...+++.+++.|.++.++|+...   -.+..++++++++.+.+.|+++.
T Consensus       257 -~G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~~~  324 (403)
T PRK05093        257 -GGFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---TPEVLEGVKARRQRFVDGLQKIN  324 (403)
T ss_pred             -CCcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHH
Confidence             899999999976        577777653 33356678889988888776422   13445778888888888887741


Q ss_pred             -CCCC-CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHH
Q 014769          335 -CISC-PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKA  410 (419)
Q Consensus       335 -~~~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~  410 (419)
                       .... ...+..|+++|+.++...   ..+..+++..+++ +||.+.|+.    .+++|+++  ..++++|++++++|++
T Consensus       325 ~~~~~~~~~~~~G~~~~~~l~~~~---~~~~~~~~~~l~~-~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~~  396 (403)
T PRK05093        325 QKYGVFSEIRGMGLLIGAELKPQY---KGRARDFLNAAAE-EGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFEK  396 (403)
T ss_pred             hhCCCeEeEeeCceEEEEEecCcc---hhHHHHHHHHHHH-CCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence             1111 224466899999886321   0135677777755 699998753    47899986  4589999999999999


Q ss_pred             HHHHH
Q 014769          411 FCQRH  415 (419)
Q Consensus       411 ~~~~~  415 (419)
                      ++.++
T Consensus       397 ~l~~~  401 (403)
T PRK05093        397 AVAKV  401 (403)
T ss_pred             HHHHh
Confidence            98754

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.96  E-value=1.3e-25  Score=212.74  Aligned_cols=323  Identities=17%  Similarity=0.123  Sum_probs=224.7

Q ss_pred             CCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC----CC
Q 014769           58 FRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR----PG  131 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~----~g  131 (419)
                      .+++|.+++++.+.+...  ....|   .+..++.+.+.+.+.+..|  .++.++++++|+++++..++.++..    ++
T Consensus        30 ~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~  104 (371)
T PRK13520         30 TEPHPIARKAHEMFLETNLGDPGLF---PGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEK  104 (371)
T ss_pred             cCchHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCC
Confidence            356788889988887642  11112   2334433444444444444  4556789999999999999877654    57


Q ss_pred             CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       132 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      |+|++.+++|+.+...++..|.+++.++.+  .++.+|++.++++++++++.|++++++|+||.+.|   +++|.++|++
T Consensus       105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~  179 (371)
T PRK13520        105 PNIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALE  179 (371)
T ss_pred             ceEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHH
Confidence            899999999999888888899998888764  34568999999999888888888889999999999   8999999999


Q ss_pred             CCCeEEEcccccccccCC-CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc--
Q 014769          212 LRVMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI--  288 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~--  288 (419)
                      +|+++++|++|+.+...- .....+ .+....-..+..|.+|. +.+|.++|++++.++       ++++.+.....+  
T Consensus       180 ~g~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~-------~~~~~l~~~~~~~~  250 (371)
T PRK13520        180 NGIFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRDE-------SYLDALAVDTPYLT  250 (371)
T ss_pred             cCCCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcCH-------HHHHhhcccCcccc
Confidence            999999999998754211 111111 11111112444578896 777889998887652       344544321111  


Q ss_pred             -------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCC
Q 014769          289 -------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN  361 (419)
Q Consensus       289 -------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~  361 (419)
                             .++.+.....++..+++....+.+++..++..++++++.+.|+++ ++..+..|..+ ++.+.++        
T Consensus       251 ~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~v~~~~~--------  320 (371)
T PRK13520        251 SKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLN-IVAFDDP--------  320 (371)
T ss_pred             CCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCce-EEEEecC--------
Confidence                   122334445566666665445667788889999999999999887 77623245444 5556654        


Q ss_pred             CHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769          362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       362 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~  413 (419)
                      +..++..+| .++||.+.++.   ..+++|+|+.  .++++++.+++.|+++++
T Consensus       321 ~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        321 NPDEVREKL-RERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence            356676666 55699987753   3568999984  689999999999998765

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.96  E-value=3.2e-26  Score=217.78  Aligned_cols=338  Identities=17%  Similarity=0.106  Sum_probs=224.4

Q ss_pred             hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      ...+|+.++||..|..... .-.-+|.+.+++.++++..... .+.......++.+.++++.        ..+.++++++
T Consensus        35 ~d~~G~~~lD~~~g~~~~~-lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~S  105 (396)
T PRK04073         35 KDPEGNRYMDMLSAYSAVN-QGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNT  105 (396)
T ss_pred             EECCCCEEEEcCCCHHhcc-CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCC
Confidence            3446889999988843321 1236799999999998754321 1111122234555555442        2368999999


Q ss_pred             HHHHHHHHHHHhcC---------CC-CeEEeeCCCCCCcHHHHhh-cCCEEE---EEeccCCC--CcccChHHHHHhhcC
Q 014769          116 CKQAVEVILSVLAR---------PG-ANVLLPRPGWPYYEGIAQR-KQVEVR---HFDLLPER--NWEVDLDAVEALADK  179 (419)
Q Consensus       116 ~~~al~~~~~~l~~---------~g-d~vlv~~p~~~~~~~~~~~-~g~~~~---~~~~~~~~--~~~~~~~~l~~~~~~  179 (419)
                      +++|++.+++....         +| ++|+....+|++....+.. .+....   +-+..+.-  -.-.|++.+++.+++
T Consensus       106 GseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~  185 (396)
T PRK04073        106 GAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITP  185 (396)
T ss_pred             hHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhccc
Confidence            99999999987642         34 7788888888876433322 221100   00000000  001268889888877


Q ss_pred             CccEEEEeCCCCccccCCCH-HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          180 NTAAMVIINPGNPCGNVFTY-HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       180 ~~~~v~i~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      +++++++..|+||||.+++. +++++|.++|+++|+++|+||+|.++.+.|..+. ....+...++   .++||.++++|
T Consensus       186 ~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pdi---~~~sK~lg~gg  261 (396)
T PRK04073        186 NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPDM---YILGKALGGGV  261 (396)
T ss_pred             CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCCE---EEecccccCCC
Confidence            77777777778999998765 5799999999999999999999998766553221 1112222222   35799999888


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC--CC
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI--PC  335 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~  335 (419)
                      +|+||+++++        ++++.+.... ..+++.+++.+.++.++|+...++   ...++.+++++++.+.|+++  +.
T Consensus       262 ~~ig~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~  330 (396)
T PRK04073        262 FPISCVAANR--------DILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPM  330 (396)
T ss_pred             CcceEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCc
Confidence            9999999875        5777775432 335667888888888888643222   23355666788888888775  22


Q ss_pred             CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                      +. . .+..|.++++.++.       +..++..+| .++||.+.+..    .+++|+++  ..+++++++++++|++++
T Consensus       331 i~-~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        331 IK-E-VRGRGLFIGVELNE-------PARPYCEAL-KEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             cc-c-eecceEEEEEEecc-------hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence            33 2 23346778887752       356777776 55799997632    46899996  578999999999999875

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.96  E-value=2.8e-26  Score=217.06  Aligned_cols=287  Identities=17%  Similarity=0.155  Sum_probs=197.8

Q ss_pred             CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEE
Q 014769           82 TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRH  157 (419)
Q Consensus        82 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~  157 (419)
                      +..+..+|+++++++..        .+++++++|+++++..++.+++++||+|+++.|.|.....    .+...|+++..
T Consensus        62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~  133 (400)
T PRK06234         62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF  133 (400)
T ss_pred             CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence            34678999999999982        2468889999999999999999999999999999976443    34667888888


Q ss_pred             EeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCCCCCCCc
Q 014769          158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPM  235 (419)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~  235 (419)
                      ++.       .|++++++++++++++|++++|+||||.+.+   +++|.++|+++  |+++|+|++|....+.    .++
T Consensus       134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~----~~l  199 (400)
T PRK06234        134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ----RPL  199 (400)
T ss_pred             ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC----Cch
Confidence            764       2788999999888999999999999999999   88889999997  9999999999875442    112


Q ss_pred             cccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhh--h-ccccCCchHHHHHHHHHHcccchHH
Q 014769          236 GLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDC--L-SIYSDIPTFIQGAIPQILEKTKEDF  311 (419)
Q Consensus       236 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~a~~~~l~~~~~~~  311 (419)
                       ..+   ..+++.|+||.++++|.++ ||+++++        ++++.++..  . ......++.....+...++.     
T Consensus       200 -~~g---~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t-----  262 (400)
T PRK06234        200 -QLG---ADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT-----  262 (400)
T ss_pred             -hhC---CcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----
Confidence             222   3488999999998889775 9988865        466666543  1 12333444444443333332     


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcC
Q 014769          312 FCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEES  375 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  375 (419)
                      +..+.++..++...+.+.|+++|.+..+..|.                .|..+.++++...    .....|++.| +-.+
T Consensus       263 l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~----~~~~~f~~~l-~~~~  337 (400)
T PRK06234        263 LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV----EEGKVVMNNV-KLAT  337 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcH----HHHHHHHHhC-Ccce
Confidence            44556666778888888888766543333332                2334456665210    1234555554 4445


Q ss_pred             eEeecCCCCC----------------------C-CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          376 VIVTPGIYVG----------------------L-KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       376 v~v~~g~~~~----------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      +.++-|....                      . ++.+|+|+|.+  +.+.+++.|.+++..
T Consensus       338 ~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~~  397 (400)
T PRK06234        338 LAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLE--DVDDIIADLKQALDL  397 (400)
T ss_pred             EeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCC--CHHHHHHHHHHHHHH
Confidence            4444443221                      0 35799999874  455666666666654

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.96  E-value=8.9e-26  Score=213.34  Aligned_cols=323  Identities=17%  Similarity=0.144  Sum_probs=222.1

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP  137 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~  137 (419)
                      .++.+.+++++.+.... ....|.  .-..++|+.+++++    |...+.+.|++++|+++++..++.++..+||.|+++
T Consensus        14 ~~~~~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~l~~l~----~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~   86 (368)
T PRK13479         14 LTTSRTVREAMLRDWGS-WDDDFN--ALTASVRAKLVAIA----TGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP   86 (368)
T ss_pred             CCCCHHHHHHhCCCCCC-CChHHH--HHHHHHHHHHHHHh----CCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence            35677777776554311 111122  23567777777776    222223568899999999999999999999999999


Q ss_pred             CCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769          138 RPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR  213 (419)
Q Consensus       138 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  213 (419)
                      .++|++.  ...++..|.+++.++.+.  ++.+|++++++++++  +++.+++++|+||||...|   +++|.++|++++
T Consensus        87 ~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~  161 (368)
T PRK13479         87 DNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHG  161 (368)
T ss_pred             eCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcC
Confidence            8888765  367788899999998753  346899999998864  3567889999999999999   889999999999


Q ss_pred             CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhhh------
Q 014769          214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL------  286 (419)
Q Consensus       214 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~------  286 (419)
                      +++|+|++++.   +. ...++..++.   .+++.|++|++ +.+|  +||++++.        ++++.+....      
T Consensus       162 ~~livDa~~~~---g~-~~~~~~~~~~---d~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~~~  224 (368)
T PRK13479        162 KRLIVDAMSSF---GA-IPIDIAELGI---DALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLSLD  224 (368)
T ss_pred             CEEEEEccccc---CC-ccccccccCc---eEEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCeeec
Confidence            99999977653   22 2223333333   26778999974 4567  79999865        3444443221      


Q ss_pred             ------------ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEee
Q 014769          287 ------------SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVK  351 (419)
Q Consensus       287 ------------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~  351 (419)
                                  ...++++...+.++.++++... ..++++..+++.++++.+.+.|+++ ++..+..+.  ....+.+.
T Consensus       225 ~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~  303 (368)
T PRK13479        225 LYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFH  303 (368)
T ss_pred             HHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEE
Confidence                        1113566666666666665432 2346777889999999999999888 776332221  11122223


Q ss_pred             cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHHHH
Q 014769          352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ++...  + .+..++..+| .++||.+.+|..+ ..+++|++. + .++++++.+++.|++++++.
T Consensus       304 ~~~~~--~-~~~~~l~~~L-~~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~  364 (368)
T PRK13479        304 APADP--A-YDFKEFYERL-KEQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM  364 (368)
T ss_pred             CCCCC--C-cCHHHHHHHH-HHCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence            33210  0 1456777676 5679999988644 256899996 4 58999999999999998765

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.95  E-value=4.7e-26  Score=201.25  Aligned_cols=312  Identities=20%  Similarity=0.244  Sum_probs=201.3

Q ss_pred             CCCC-CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH--HHHhc----C--------CCCeEEeeCCCC
Q 014769           77 FNCY-ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI--LSVLA----R--------PGANVLLPRPGW  141 (419)
Q Consensus        77 ~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~--~~~l~----~--------~gd~vlv~~p~~  141 (419)
                      ..+| +...|++++|+..++.+      ++++++|++..+++-.+..-  ..++.    .        +.-+.++|.|+|
T Consensus        61 ~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY  134 (425)
T PF12897_consen   61 CRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY  134 (425)
T ss_dssp             TTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred             ccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence            4589 88899999999999999      89999999987776554322  12221    1        124689999999


Q ss_pred             CCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-ccEEEEeCC--CCccccCCCHHHHHHHHHH-HHhCCCeEE
Q 014769          142 PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-TAAMVIINP--GNPCGNVFTYHHLQEIAEM-ARKLRVMVV  217 (419)
Q Consensus       142 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~i~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~li  217 (419)
                      .-+..+++.+|++...+|+.++   ++|+|.+++++.++ ...-+.|.|  +||||.++|.+..++++++ ....+..|+
T Consensus       135 DRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~  211 (425)
T PF12897_consen  135 DRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF  211 (425)
T ss_dssp             HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred             hHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence            9999999999999999998654   68999999988543 334455666  8999999999999999998 446799999


Q ss_pred             EcccccccccC-CCCC-C--Cc----cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-cc
Q 014769          218 ADEVYGHLTFG-SIPY-T--PM----GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SI  288 (419)
Q Consensus       218 ~De~~~~~~~~-~~~~-~--~~----~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~  288 (419)
                      -|.+|..-.+. .... .  .+    ..-+..++++.+.|+||. ..||.+++++.++.        +-++.++... ..
T Consensus       212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~~  282 (425)
T PF12897_consen  212 WDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSVQ  282 (425)
T ss_dssp             EE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHHH
T ss_pred             eecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcCc
Confidence            99999976662 2221 1  11    123456689999999999 79999999999876        4555555553 33


Q ss_pred             ccCCchHHHHHHHHHHcccc---hHHHHHHHHHHHHHHHHHHHHhhc-CC---CCCCCCCCCceEEEEeecCcccccCCC
Q 014769          289 YSDIPTFIQGAIPQILEKTK---EDFFCKLIDTLRESAEICYDGVKE-IP---CISCPNKPEGSMVTMVKLNPWLLEDIN  361 (419)
Q Consensus       289 ~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~l~~-~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~  361 (419)
                      +.++.-+.|..-..++....   ..+.+++.+.++-+.+.+.+.|++ +.   ++..|..|.||+|+++...+       
T Consensus       283 tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-------  355 (425)
T PF12897_consen  283 TIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-------  355 (425)
T ss_dssp             -S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-------
T ss_pred             eeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-------
Confidence            56788889988888887632   456777777777787777777765 43   44447899999999998875       


Q ss_pred             CHHHHHHHHHHhcCeEeec-CCCCCC-----CCeEEEEee-cCHHHHHHHHHHHHHHHH
Q 014769          362 DDIEFALKLAKEESVIVTP-GIYVGL-----KNWLRIAFC-AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       362 ~~~~~~~~ll~~~gv~v~~-g~~~~~-----~~~~Ris~~-~~~~~l~~~l~~l~~~~~  413 (419)
                      .....+.++.++.||.++| |..|-.     +..|||+++ .+.+|++.+++.+..+++
T Consensus       356 G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~  414 (425)
T PF12897_consen  356 GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK  414 (425)
T ss_dssp             T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence            3455556777999999998 555522     578999996 577999999999987765

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.95  E-value=1.2e-26  Score=217.48  Aligned_cols=309  Identities=16%  Similarity=0.102  Sum_probs=221.9

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-----------
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-----------  129 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-----------  129 (419)
                      +..+.+.+...+.. ....|....+..++++++++++.+.+|.+.+++++++|+|+++++..++.+++.           
T Consensus        12 ~~~~~~~~~~~~n~-~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~   90 (345)
T cd06450          12 PALLLEMLTSAKNA-IDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGG   90 (345)
T ss_pred             HHHHHHHHHHhcCC-CCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence            34444555544433 334588888999999999999999888764567899999999999999988753           


Q ss_pred             -CC--CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHH
Q 014769          130 -PG--ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       130 -~g--d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~  200 (419)
                       ++  +.|+++.++|..+...+...|.+++.++++++  +.+|++.|++++++      +++.+++++|+||||.+.+  
T Consensus        91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~--  166 (345)
T cd06450          91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP--  166 (345)
T ss_pred             cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC--
Confidence             23  47888899999988888888999999987643  37899999999876      6778889999999999977  


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc-cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                       +++|.++|+++|+++++|++|+.+.+........ ....  .-..+..|++|+ +.++.++|+++.+            
T Consensus       167 -~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~-l~~p~g~g~~~~~------------  230 (345)
T cd06450         167 -LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE--RVDSISVDPHKY-GLVPLGCSAVLVR------------  230 (345)
T ss_pred             -HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc--ccCEEEEchhHh-hCCCcchHHHHHH------------
Confidence             8999999999999999999998866432211110 1111  112556699997 4566778887541            


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                                    ...+.++...+.   ...++++.++..++++++.+.|.+++++.++..+..+++ .++++..... 
T Consensus       231 --------------~~~~~~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv-~f~~~~~~~~-  291 (345)
T cd06450         231 --------------ALKLWATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLV-CFRLKPSVKL-  291 (345)
T ss_pred             --------------HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEE-EEEECCcchh-
Confidence                          333444444443   356788888999999999999998878764434555544 4445431000 


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKA  410 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~  410 (419)
                      ..+..++..+| .++|+.+.++..+....++|+++.   ++.++++++++.|++
T Consensus       292 ~~~~~~i~~~L-~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         292 DELNYDLSDRL-NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             hHHHHHHHHHH-HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence            01245666666 566666666555545679999994   378999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.95  E-value=2.4e-25  Score=212.30  Aligned_cols=335  Identities=13%  Similarity=0.128  Sum_probs=226.8

Q ss_pred             eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC--CC------CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY--AT------NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~------~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      +-|..+.+     .|.++.+++++.+.+.....+.+  ..      ...+.++|+.+++++      +.++++|++++|+
T Consensus         5 ~yld~aa~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~   73 (402)
T TIGR02006         5 IYLDYAAT-----TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSGA   73 (402)
T ss_pred             EEeeCCcC-----CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence            55555543     25678889998877643211111  11      123556788888887      5678899999999


Q ss_pred             HHHHHHHHHHhc----CCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769          117 KQAVEVILSVLA----RPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       117 ~~al~~~~~~l~----~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      +++++.++.++.    .+||+|++..++|+.+...   ++..|.+++.++++  .++.+|++.+++++++++++++++++
T Consensus        74 t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~~  151 (402)
T TIGR02006        74 TESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMHV  151 (402)
T ss_pred             HHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEECC
Confidence            999999887763    5889999999999875443   34568898888865  34568999999999888899999999


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP  269 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  269 (419)
                      +||||.+.|   +++|.++|+++|+++++|++++...    .+..+..++.   .+++.|.+|.++.+|  +|+++++++
T Consensus       152 ~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l~~~~~  219 (402)
T TIGR02006       152 NNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK----IPINVNELKV---DLMSISGHKIYGPKG--IGALYVRRK  219 (402)
T ss_pred             CcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC----cccCccccCC---CEEEEehhhhcCCCc--eEEEEEccC
Confidence            999999998   8899999999999999999998632    2222333333   377788999865445  899888753


Q ss_pred             CCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceE
Q 014769          270 NGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSM  346 (419)
Q Consensus       270 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~  346 (419)
                      ......+ ........ ....++++.....++..+++.. .+.++...++.+++++.+.+.|++++++.....+.  ...
T Consensus       220 ~~~~~~~-~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~  297 (402)
T TIGR02006       220 PRVRLEA-LIHGGGHERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPG  297 (402)
T ss_pred             CCCCCCc-eecCCCccCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCC
Confidence            2111001 10000000 1113456666666776777653 24577778889999999999998877765221111  111


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHH
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGL  405 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l  405 (419)
                      .+.+.++.      .+..++...+   +++.+..|..+..                   .+++|+|++  ++++|+++++
T Consensus       298 ~~~v~f~~------~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~  368 (402)
T TIGR02006       298 NLNVSFNY------VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAV  368 (402)
T ss_pred             eEEEEEeC------cCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHH
Confidence            11233331      1234444333   5888887766532                   378999995  6899999999


Q ss_pred             HHHHHHHHHH
Q 014769          406 GRMKAFCQRH  415 (419)
Q Consensus       406 ~~l~~~~~~~  415 (419)
                      +.|+++++.+
T Consensus       369 ~~l~~~~~~~  378 (402)
T TIGR02006       369 KLVKSAIDKL  378 (402)
T ss_pred             HHHHHHHHHH
Confidence            9999998765

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.95  E-value=2.1e-25  Score=212.40  Aligned_cols=346  Identities=15%  Similarity=0.151  Sum_probs=228.5

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      ..+|+.++||..|.....-.. .+|.+.+++.+++.....  ..|.. ....++.+.++++.        ..++++++++
T Consensus        35 d~dG~~~lD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~s  104 (406)
T PRK12381         35 DQQGKEYIDFAGGIAVNALGH-AHPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNS  104 (406)
T ss_pred             eCCCCEEEEcCcCHhhccCCC-CCHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCC
Confidence            346888999988743322222 489999999999865311  11211 11234444444432        2469999999


Q ss_pred             HHHHHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCCEEEE----EeccCC--CCcccChHHHHHhhcCCc
Q 014769          116 CKQAVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVEVRH----FDLLPE--RNWEVDLDAVEALADKNT  181 (419)
Q Consensus       116 ~~~al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~~~~----~~~~~~--~~~~~~~~~l~~~~~~~~  181 (419)
                      +++|++.+++....        +...|+..+.+|++....+...+.....    .++.+.  ...-.|++.+++.+.+++
T Consensus       105 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  184 (406)
T PRK12381        105 GAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQT  184 (406)
T ss_pred             cHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCe
Confidence            99999999998631        3478999999999876444333322110    011110  001237888998887555


Q ss_pred             cEEEEeCCCCccccCC--CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCc
Q 014769          182 AAMVIINPGNPCGNVF--TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW  259 (419)
Q Consensus       182 ~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  259 (419)
                      .++ +++|.|++|-++  +.+++++|.++|++||+++|+||+|.++.+.|..+ ....++..+.   +.|+||.++ +|+
T Consensus       185 aav-iiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~  258 (406)
T PRK12381        185 CAV-IVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGF  258 (406)
T ss_pred             eEE-EEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCC
Confidence            444 457999887654  79999999999999999999999998876666432 2222222222   248999975 799


Q ss_pred             eeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-CCC
Q 014769          260 RFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP-CIS  337 (419)
Q Consensus       260 r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~  337 (419)
                      |+||+++++        ++++.+.... ..+++.+++.+.++.+.|+...   -.+..++++++.+++.+.|+++. ...
T Consensus       259 ~ig~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~  327 (406)
T PRK12381        259 PIGAMLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYG  327 (406)
T ss_pred             ceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            999999875        5777776533 3356778888888888776522   22456777888888888887641 122


Q ss_pred             CCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769          338 CPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       338 ~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+. ....|.++++.++...   ......+.. .+.++||.+.+..    ++.+|+++.  .++++|++++++|++++++
T Consensus       328 ~~~~vrg~Gl~~~~~l~~~~---~~~~~~~~~-~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~  399 (406)
T PRK12381        328 LFSEIRGLGLLIGCVLNAEY---AGKAKQISQ-EAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACER  399 (406)
T ss_pred             CEEEEecCeEEEEEEecCch---hhHHHHHHH-HHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence            111 2345788888775310   001234444 4567899997642    468999984  6899999999999999988


Q ss_pred             Hhcc
Q 014769          415 HTKK  418 (419)
Q Consensus       415 ~~~~  418 (419)
                      +.++
T Consensus       400 ~~~~  403 (406)
T PRK12381        400 FVSR  403 (406)
T ss_pred             HHhc
Confidence            7654

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.95  E-value=1.3e-25  Score=210.08  Aligned_cols=324  Identities=13%  Similarity=0.110  Sum_probs=214.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      =.++||- .|..+..+...+++++++++.+..++     |.   +..++++++.+++.+.+|    .+++++|+|+|+++
T Consensus         7 ~~~~ina-~g~~t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al   73 (363)
T TIGR01437         7 LKKVINA-SGKMTILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGI   73 (363)
T ss_pred             CceEEEC-CcEeecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHH
Confidence            3456663 33223233345789999999988643     32   245777777777776555    35789999999999


Q ss_pred             HHHHHHhcCCCC---------------eEEeeCCCCCCc----HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCc
Q 014769          121 EVILSVLARPGA---------------NVLLPRPGWPYY----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT  181 (419)
Q Consensus       121 ~~~~~~l~~~gd---------------~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  181 (419)
                      ..++.+++++||               +|+++.|.|..+    ...+...|..+++++.    ++.+|++.+++++++++
T Consensus        74 ~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~~~t  149 (363)
T TIGR01437        74 AQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAITEKT  149 (363)
T ss_pred             HHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcChhc
Confidence            999999999998               999999888765    4667778999888865    24589999999999888


Q ss_pred             cEEE-EeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          182 AAMV-IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       182 ~~v~-i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      ++++ +++|+||+|.+.+   +++|.++|+++|+++|+|++|+.-      ...+..++.   .+++.|+||.  +.|++
T Consensus       150 ~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~------~~~~~~~g~---D~~~~S~~K~--l~gp~  215 (363)
T TIGR01437       150 AAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEED------LQKYYRLGA---DLVIYSGAKA--IEGPT  215 (363)
T ss_pred             eEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCc------hHHHHHcCC---CEEEEeCCcc--cCCCc
Confidence            8766 5678999999999   788999999999999999999721      111112322   3777899997  46778


Q ss_pred             eEEEEeeCCCCccchhhHHHHHHhhhcc------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          261 FGWLVTNDPNGIFQKSGIIDSIKDCLSI------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                      .|+++.++        ++++.++.....      .+..+..++.++...+..    ...+..+.+.++++.+.+.|.++|
T Consensus       216 ~G~l~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~----~~~~~~~~~~~~~~~l~~~L~~i~  283 (363)
T TIGR01437       216 SGLVLGKK--------KYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLS----TGKESGAEMVAKLTPFIEALNTLK  283 (363)
T ss_pred             eEEEEEcH--------HHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHc----cCcccHHHHHHHHHHHHHHHhcCC
Confidence            99988754        455555332110      011122222232222222    112223344456677999999888


Q ss_pred             CCCCCCC-CCceE---EEEeecCcccccCCCCHHHHHHHHHHhcC--eEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHH
Q 014769          335 CISCPNK-PEGSM---VTMVKLNPWLLEDINDDIEFALKLAKEES--VIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGR  407 (419)
Q Consensus       335 ~~~~~~~-p~~g~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--v~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~  407 (419)
                      ++.+... +..+.   ..-+.++... .+ .+..++...| ++++  |.+.+  .|...+.+|+++ ..+++|++.++++
T Consensus       284 g~~~~~~~~~~~~~~~~~~v~~~~~~-~g-~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~  358 (363)
T TIGR01437       284 GVSASIVQDEAGRDIARAEIRFDESE-LG-MTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVER  358 (363)
T ss_pred             CeEEEEecCCCCCcCceEEEEEeccC-CC-CCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHH
Confidence            8874311 11111   1112232110 01 2567777766 6567  55544  455678999999 5679999999999


Q ss_pred             HHHHH
Q 014769          408 MKAFC  412 (419)
Q Consensus       408 l~~~~  412 (419)
                      |++++
T Consensus       359 l~~~~  363 (363)
T TIGR01437       359 IREIV  363 (363)
T ss_pred             HHHhC
Confidence            98763

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.95  E-value=7.8e-25  Score=207.49  Aligned_cols=314  Identities=16%  Similarity=0.145  Sum_probs=215.2

Q ss_pred             hHHHHHHHHHHHhCC--CCCCCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc------CCC
Q 014769           61 AVEAEDAIVDAVRSG--KFNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA------RPG  131 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~--~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~------~~g  131 (419)
                      .+.+.+++...+...  ....|+. ..-..++++.+++++      +++++++++++|+++++..++.++.      .+|
T Consensus        33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g  106 (373)
T TIGR03812        33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRT  106 (373)
T ss_pred             hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCC
Confidence            455566666654321  1222321 111245556666665      4567788999999999988877654      367


Q ss_pred             CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       132 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      |+|++++++|..+...++..|++++.++++  .++.+|++++++.+.+++..+++++|+||||.+.+   +++|.++|++
T Consensus       107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~  181 (373)
T TIGR03812       107 PNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALE  181 (373)
T ss_pred             cEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHH
Confidence            999999999999988899999999998875  35678999999998877766666678999999988   8899999999


Q ss_pred             CCCeEEEcccccccccC----CCC--CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh
Q 014769          212 LRVMVVADEVYGHLTFG----SIP--YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC  285 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~----~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~  285 (419)
                      +|+++|+|++|+.+...    +..  ...+...+.   ..+..|.+|. ++++.++|+++..++       ++++.++..
T Consensus       182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~---d~~~~s~~K~-~~~~~~~G~~~~~~~-------~~~~~l~~~  250 (373)
T TIGR03812       182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV---QSITIDPHKM-GLSPIPAGGILFRSK-------SYLKYLSVD  250 (373)
T ss_pred             cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC---CEEEECcccc-CCCcCCceEEEEeCH-------HHHhhhccc
Confidence            99999999999865321    000  111111111   1344578894 778888887776442       355544321


Q ss_pred             hcc---------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          286 LSI---------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       286 ~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      ..+         .++.+.....++..+++....+.+++..+++.++++++++.|+++ ++..+..|. ..++.++++   
T Consensus       251 ~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~---  325 (373)
T TIGR03812       251 APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPV-LNIVAFEVD---  325 (373)
T ss_pred             CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCC-ceEEEEEeC---
Confidence            111         123444556666666765445677888899999999999999988 554232333 446666664   


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKA  410 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~  410 (419)
                           +..++..+| .++||.+.++.   .++++|+++.  .++++++.+++.|++
T Consensus       326 -----~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~  372 (373)
T TIGR03812       326 -----DPEEVRKKL-RDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE  372 (373)
T ss_pred             -----CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence                 244666666 56799987653   3579999995  689999999999875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.95  E-value=8.6e-26  Score=216.86  Aligned_cols=348  Identities=13%  Similarity=0.083  Sum_probs=228.1

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.++||..|..... .-..+|.+.+++.+++..... .+.+..+..+|+++|++++.       ..++|++++|
T Consensus        42 l~d~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~s  112 (423)
T TIGR00713        42 LYDVDGNEYIDYVLSWGPLI-LGHAHPRVVEAVKEALERGTS-YGAPTEAEILLAKEIISRVP-------SVEMVRFVNS  112 (423)
T ss_pred             EEeCCCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCCc-CCCCCHHHHHHHHHHHHhCC-------cccEEEEeCC
Confidence            33456999999999965432 124679999999999987543 23345678899999999872       1368999999


Q ss_pred             HHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc---CCEEEEEeccCC-------CCcc---cChHHHHHhhc--
Q 014769          116 CKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK---QVEVRHFDLLPE-------RNWE---VDLDAVEALAD--  178 (419)
Q Consensus       116 ~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~---g~~~~~~~~~~~-------~~~~---~~~~~l~~~~~--  178 (419)
                      +++|++.+++....  ..++|+..+++|+++...+...   +......+..+.       ....   .|++.+++.+.  
T Consensus       113 GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~  192 (423)
T TIGR00713       113 GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY  192 (423)
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc
Confidence            99999999887532  4589999999999875433321   111111111000       0000   16888888876  


Q ss_pred             -CCccEEEEe-CCCCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769          179 -KNTAAMVII-NPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL  255 (419)
Q Consensus       179 -~~~~~v~i~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  255 (419)
                       +++.++++. .|+| +|.+.+ .+++++|.++|++||+++|+||+|.++.++......  .++..++   +.+|||.++
T Consensus       193 ~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~--~~~~~pD---i~t~sK~l~  266 (423)
T TIGR00713       193 GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQE--YFGVEPD---LTTLGKIIG  266 (423)
T ss_pred             CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHH--HhCCCcc---hhhhhhhhc
Confidence             345566654 5677 788776 699999999999999999999999988543211111  1222222   237999976


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                       +|+|+||+++++        ++++.+...    ...+++.+++++.++.++|+... ....+...+....+++.+.+.+
T Consensus       267 -~G~pig~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~  337 (423)
T TIGR00713       267 -GGLPVGAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVL  337 (423)
T ss_pred             -CCCceeeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence             899999999975        577777532    22355788899988888887533 2356666666666777777777


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCccccc-----CCCCH---HHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLE-----DINDD---IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALK  402 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~-----~~~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~  402 (419)
                      +++ ++.......++++ .+.+......     ...+.   ..+...++ ++||.+.++ .|   +.+|+++..++++++
T Consensus       338 ~~~-~~~~~v~~~g~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-~~---~~~~l~~~~t~~~i~  410 (423)
T TIGR00713       338 EDT-GIPHTVNRVGSMF-SLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPS-QF---EACFLSAAHTEEDIE  410 (423)
T ss_pred             Hhc-CCCeEEEeeccEE-EEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecC-Cc---cceeeECCCCHHHHH
Confidence            666 4431112333333 3333211000     00111   24555665 579998654 22   357899888999999


Q ss_pred             HHHHHHHHHHHH
Q 014769          403 DGLGRMKAFCQR  414 (419)
Q Consensus       403 ~~l~~l~~~~~~  414 (419)
                      +++++|.+++.+
T Consensus       411 ~~~~~l~~~l~~  422 (423)
T TIGR00713       411 NTIEAAEEVFAE  422 (423)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999865

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.95  E-value=2.3e-25  Score=208.87  Aligned_cols=290  Identities=18%  Similarity=0.183  Sum_probs=203.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g  152 (419)
                      +.+|+++ ...+|++.++++.      +.  +..++++|+++++..++ .+..+||+|++++|.|++.    ...+...|
T Consensus        46 y~r~~~p-t~~~le~~la~l~------g~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G  115 (366)
T PRK08247         46 YSRTGNP-TRGVLEQAIADLE------GG--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN  115 (366)
T ss_pred             ccCCCCc-hHHHHHHHHHHHh------CC--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence            4556654 5789999999997      33  33577888899999876 5678999999999999874    33445688


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++.       .|++.+++++++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|......    
T Consensus       116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~----  181 (366)
T PRK08247        116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQ----  181 (366)
T ss_pred             ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----
Confidence            88887764       37899999998889999999999998654   55999999999999999999999642221    


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .++ .   .+..++++|+||.++.+ +.+.|+++++++       ++.+.+...... ....++..++.+...++.    
T Consensus       182 ~p~-~---~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t----  246 (366)
T PRK08247        182 RPL-E---EGADIVIHSATKYLGGHNDVLAGLVVAKGQ-------ELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----  246 (366)
T ss_pred             Cch-h---cCCcEEEeecceeccCCCceeeeEEecChH-------HHHHHHHHHHHhcCCCCChHHHHHHHhccCc----
Confidence            111 1   23358999999997653 468999987532       466666554432 344566666666555543    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CceEEEEeecCcccccCCCCHHHHHHH---------HHHhcCeEeec
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKP-EGSMVTMVKLNPWLLEDINDDIEFALK---------LAKEESVIVTP  380 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~---------ll~~~gv~v~~  380 (419)
                       +..+.++.+++++.+.+.|+++|++..+..| .+|+|.| .++..     .....|++.         +.....+.+.|
T Consensus       247 -l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~-----~~~~~~~~~l~~~~~~~slg~~~sl~~~p  319 (366)
T PRK08247        247 -LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE-----EWVNPFLKSLKLITFAESLGGVESFITYP  319 (366)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH-----HHHHHHHHcCCcceEccCCCCCceEEECC
Confidence             4455667799999999999998888754455 7888877 56421     011122222         11234556667


Q ss_pred             CCCCCC-------------CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          381 GIYVGL-------------KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       381 g~~~~~-------------~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      ++.++.             ++.+|+|++..  +.+.+++.|++++.+
T Consensus       320 ~~~~~~~~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~al~~  364 (366)
T PRK08247        320 ATQTHADIPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQAFKQ  364 (366)
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence            754421             35799999874  566777777777764

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.95  E-value=4.7e-25  Score=213.40  Aligned_cols=326  Identities=18%  Similarity=0.194  Sum_probs=217.1

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC--CCCHHHHHHHHHH---HHhhCCCCCCCCcEEEcccHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADY---LSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~---l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..++|+.|.+.    +..+..+.++....   .....|.+.  .-...+++.++++   +.+..|  ++.+++++|+|++
T Consensus        69 ~~~~lg~g~~~----~~~p~~~~~~~~~~---~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t  139 (447)
T PRK00451         69 YPSFLGAGAYD----HYIPAVVDHIISRS---EFYTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT  139 (447)
T ss_pred             CcccCcccccC----CcCcHHHHHHHhch---hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence            56788888643    34455555444322   111234440  1123355555533   355555  4566899999999


Q ss_pred             HHHHHHHHHhc-CCCCeEEeeCCCCCCcHHHHhh----cCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769          118 QAVEVILSVLA-RPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP  192 (419)
Q Consensus       118 ~al~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np  192 (419)
                      +++..++.++. .+||+|+++++.|+.+...+..    .|.+++.+++++  + .+|+++++++++++++++++++| ||
T Consensus       140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~  215 (447)
T PRK00451        140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF  215 (447)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence            99999998875 6899999999999887766544    688999988754  3 78999999999888999999999 89


Q ss_pred             cccCCCHHHHHHHHHHHHhCCCeEEE--cccccccccCCCCCCCccccCCCCcEEEEe---cCCCcCCCCCceeEEEEee
Q 014769          193 CGNVFTYHHLQEIAEMARKLRVMVVA--DEVYGHLTFGSIPYTPMGLFGSIVPVITLG---SISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~r~G~~~~~  267 (419)
                      ||.+.+   +++|.++|+++|+++++  |.+.....      .....++.   .++++   ++||.+.+.|+++||++++
T Consensus       216 tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~------~~~~~~~~---D~~~~s~~k~~~~~~~~Gpg~G~l~~~  283 (447)
T PRK00451        216 FGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLL------KPPGEYGA---DIVVGEGQPLGIPLSFGGPYLGFFATR  283 (447)
T ss_pred             CCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccC------CCcccCCC---CEEEECCCcCCCCCCCCCCCchHHHhh
Confidence            999988   99999999999999988  54322110      11122332   25555   6777777888999999886


Q ss_pred             CCCCccchhhHHHHH----------------------------Hhhhccc-cCCchHHH-HHHHHHHcccchHHHHHHHH
Q 014769          268 DPNGIFQKSGIIDSI----------------------------KDCLSIY-SDIPTFIQ-GAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l----------------------------~~~~~~~-~~~~~~~~-~a~~~~l~~~~~~~~~~~~~  317 (419)
                      .        ++++.+                            +...... ...+...+ .++...++....+.+++..+
T Consensus       284 ~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~  355 (447)
T PRK00451        284 K--------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE  355 (447)
T ss_pred             H--------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence            5        344432                            1111111 11122222 33333343333577899999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE--eecCcccccCCCCHHHHHHHHHHhcCeE-eecCCCCC--CCCeEEE
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTM--VKLNPWLLEDINDDIEFALKLAKEESVI-VTPGIYVG--LKNWLRI  392 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~gv~-v~~g~~~~--~~~~~Ri  392 (419)
                      ++.++++++.+.|++++++. +.  .+++|.+  ++++       .+..++.++|++ +||. ..++..++  ..+++|+
T Consensus       356 ~~~~~~~~l~~~L~~~~g~~-~~--~~~~~~~~~v~~~-------~~~~~~~~~L~~-~gi~~~~~~~~~~~~~~~~~rv  424 (447)
T PRK00451        356 QNHQKAHYLAERLAEIGGVE-LF--DGPFFNEFVVRLP-------KPAEEVNEALLE-KGILGGYDLGRYYPELGNHLLV  424 (447)
T ss_pred             HHHHHHHHHHHHHhhcCCEE-ec--CCCeEEEEEEecC-------CCHHHHHHHHHh-cCCCCCcccccccCCcCCEEEE
Confidence            99999999999999987777 32  3444443  4443       146788888855 4665 34455443  2579999


Q ss_pred             Eee--cCHHHHHHHHHHHHHHH
Q 014769          393 AFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       393 s~~--~~~~~l~~~l~~l~~~~  412 (419)
                      ++.  .++++++++++.|++++
T Consensus       425 s~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        425 CVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             ecCCCCCHHHHHHHHHHHHHHh
Confidence            994  68899999999998764

>PLN02242 methionine gamma-lyase

Probab=99.95  E-value=2e-25  Score=211.41  Aligned_cols=215  Identities=17%  Similarity=0.172  Sum_probs=165.4

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH-----hhcCCEEEEE
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA-----QRKQVEVRHF  158 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~-----~~~g~~~~~~  158 (419)
                      +-..+|++.++++.        +.+.+++++|+++|+..++.+++++||.|+++.|.|..+...+     +..|.+++.+
T Consensus        76 Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~  147 (418)
T PLN02242         76 PTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV  147 (418)
T ss_pred             hhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence            45689999999987        2357789999999999999999999999999999998776544     2367776655


Q ss_pred             eccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769          159 DLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       159 ~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                      +.       .|++.+++++++ ++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|..+.+..      ..
T Consensus       148 d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~------~~  211 (418)
T PLN02242        148 DI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP------AR  211 (418)
T ss_pred             CC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH------HH
Confidence            43       278999999987 4899999999999999997   8999999999999999999998655421      12


Q ss_pred             cCCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHH
Q 014769          238 FGSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      ++   ..++++|+||.++++|.+ .||+++++        ++++.++....   ...++....|.|...+...   ..+.
T Consensus       212 ~g---~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~tl~  277 (418)
T PLN02242        212 LG---ADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PHLS  277 (418)
T ss_pred             cC---CcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---CcHH
Confidence            22   348899999999889987 58888754        56666665532   1234455556665544432   3455


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          314 KLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      .+.++++++++.+.+.|+++ ++.
T Consensus       278 ~r~~~~~~~a~~la~~L~~~-~~~  300 (418)
T PLN02242        278 LRMKEHCRRAMEYAKRMKEL-GLK  300 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CCE
Confidence            66778899999999999987 344

>PRK14012 cysteine desulfurase; Provisional

Probab=99.95  E-value=1e-24  Score=208.28  Aligned_cols=334  Identities=13%  Similarity=0.159  Sum_probs=219.3

Q ss_pred             eeccCCCCCCCCCCCChHHHHHHHHHHHh--CCCCCCC--CC------CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVR--SGKFNCY--AT------NSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~Y--~~------~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      |-|..+..     .|+++.+++++.+.+.  ....+..  ..      .....++|+.+++++      +.++++|++++
T Consensus         5 iyld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~~   73 (404)
T PRK14012          5 IYLDYSAT-----TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFTS   73 (404)
T ss_pred             EEecCcCC-----CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEeC
Confidence            45555543     2567888899888764  2111111  00      123457788888887      56778899999


Q ss_pred             cHHHHHHHHHHHhc----CCCCeEEeeCCCCCCcHHHH---hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEe
Q 014769          115 GCKQAVEVILSVLA----RPGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII  187 (419)
Q Consensus       115 g~~~al~~~~~~l~----~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~  187 (419)
                      |++++++.++.++.    .+||.|++++++|+......   +..|.+++.++.++  ++.+|++.+++++++++++++++
T Consensus        74 g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~  151 (404)
T PRK14012         74 GATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSIM  151 (404)
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEE
Confidence            99999999887764    68999999999998764433   34589988888753  45689999999999889999999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      +++||||.+.|   +++|.++|+++|+++|+|++++...    ....+..++.   .+++.|++|.++ |+ ++|+++++
T Consensus       152 ~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~~g-p~-g~G~l~~~  219 (404)
T PRK14012        152 HVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGK----VPIDLSKLKV---DLMSFSAHKIYG-PK-GIGALYVR  219 (404)
T ss_pred             CcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhcCC----cccCcccCCC---CEEEEehhhccC-CC-ceEEEEEe
Confidence            99999999998   8899999999999999999998522    2222333333   267779999754 43 58999887


Q ss_pred             CCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C---C
Q 014769          268 DPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-P---E  343 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p---~  343 (419)
                      ++......+.....-.......++++.....++.++++.. .....+..++.+..++++.+.|++++++..... +   .
T Consensus       220 ~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~  298 (404)
T PRK14012        220 RKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVP  298 (404)
T ss_pred             cCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence            6421110000000000000012233444444444444432 234555677888888899998888766552211 1   1


Q ss_pred             ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHH
Q 014769          344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALK  402 (419)
Q Consensus       344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~  402 (419)
                      ..+++++.+.        +..++...+   +++.+.+|..|..                   .+.+|++++  +++++++
T Consensus       299 ~~~~~~~~~~--------~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd  367 (404)
T PRK14012        299 GNLNVSFNYV--------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEID  367 (404)
T ss_pred             CEEEEEEeCc--------CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHH
Confidence            2234454442        233444444   3677777655421                   368999994  6899999


Q ss_pred             HHHHHHHHHHHHH
Q 014769          403 DGLGRMKAFCQRH  415 (419)
Q Consensus       403 ~~l~~l~~~~~~~  415 (419)
                      .+++.|++++..+
T Consensus       368 ~~~~~l~~~~~~~  380 (404)
T PRK14012        368 YAIELVRKSIGKL  380 (404)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988765

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.95  E-value=6.8e-25  Score=207.05  Aligned_cols=290  Identities=14%  Similarity=0.139  Sum_probs=197.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g  152 (419)
                      +.+|+++ ...+|++.++++.      +  .+..++++++++++..++.+++++||+|+++.|.|......+    ...|
T Consensus        55 y~r~~~p-t~~~Le~~lA~l~------G--~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g  125 (386)
T PRK06767         55 YSRLGNP-TVKLFEERMAVLE------G--GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM  125 (386)
T ss_pred             ccCCCCc-chHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence            4456554 4689999999998      3  234566666678999999999999999999999887654433    3345


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++.       .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|....+.    
T Consensus       126 i~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~----  191 (386)
T PRK06767        126 ITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ----  191 (386)
T ss_pred             eEEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            55444432       3788999999888999999999999999999   889999999999999999999753322    


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHH-hhhc-cccCCchHHHHHHHHHHcccch
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIK-DCLS-IYSDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~~a~~~~l~~~~~  309 (419)
                      .++ ..+.   .+++.|+||.++.+|.++ ||+++++        +.+..+. .... .....++..++++...|+    
T Consensus       192 ~pl-~~g~---Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~----  255 (386)
T PRK06767        192 RPL-ELGC---DAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLK----  255 (386)
T ss_pred             Cch-hcCC---cEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC----
Confidence            112 1222   378889999998888885 8888765        3454443 2222 223345444444333333    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT  379 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  379 (419)
                       .+..+.++.+++...+.+.|+++|++..+..|.          .|-.+.+.++..    ..+..+|++.| +..++.++
T Consensus       256 -tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~----~~~~~~f~~~l-~~~~~~~s  329 (386)
T PRK06767        256 -TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG----KEETQAFINDL-HFITIAVS  329 (386)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC----HHHHHHHHHhC-CccEEecC
Confidence             345566778899999999999998887554441          222444556421    11345676666 66676665


Q ss_pred             cCCCCCC-----------------------CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          380 PGIYVGL-----------------------KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       380 ~g~~~~~-----------------------~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      -|.....                       ++.+|+|+|.+  +.+.+++.|.+++.
T Consensus       330 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~  384 (386)
T PRK06767        330 LGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE--SWEDIVSDLEQALK  384 (386)
T ss_pred             CCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence            5532210                       35799999974  46667777777665

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.95  E-value=8e-25  Score=209.55  Aligned_cols=354  Identities=13%  Similarity=0.069  Sum_probs=226.6

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.++||..|..+... -.-+|.+.+++.+++.+.... +....+.+ ....+++++....+.+. .++++++++++
T Consensus        37 d~dG~~~lD~~~g~~~~~l-Gh~~~~i~~a~~~~~~~~~~~-~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGs  112 (425)
T PRK08088         37 DVEGREYLDFAGGIAVLNT-GHLHPKVVAAVEAQLKKLSHT-CFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGS  112 (425)
T ss_pred             eCCCCEEEEcCCchhhcCC-CCCCHHHHHHHHHHHhhCCCc-cccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcH
Confidence            3458889999988654321 235899999999998764322 22212223 34477777776544322 24778888888


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEE--------------EEeccCCCCcccC----hHHHHHhh
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVR--------------HFDLLPERNWEVD----LDAVEALA  177 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~--------------~~~~~~~~~~~~~----~~~l~~~~  177 (419)
                      +|++.+++....  ....|+..+++|++....+...+....              ..+...+.+ ..+    ++.++..+
T Consensus       113 ea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l  191 (425)
T PRK08088        113 EAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIF  191 (425)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHH
Confidence            888877776532  235677779999987655554432211              011100000 111    44577766


Q ss_pred             c----CCccEEEEeCC--CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCC
Q 014769          178 D----KNTAAMVIINP--GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS  251 (419)
Q Consensus       178 ~----~~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  251 (419)
                      .    .+..+.+++.|  ++++....+.+++++|.++|+++|+++|+||+|.++.+.+.. ..+...+   .+..+.|||
T Consensus       192 ~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~-~~~~~~~---~~pdi~s~s  267 (425)
T PRK08088        192 KNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTL-FAMEQMG---VAADLTTFA  267 (425)
T ss_pred             HhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hHHhhcC---CCCCEEEEe
Confidence            4    23445666777  577777889999999999999999999999999987655432 1221222   223467999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      |.++ +|+|+||++++.        ++++.+.... ..+++.+++.|.++..+|+... ++.+++.+...+.+++.+.+.
T Consensus       268 K~l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l  338 (425)
T PRK08088        268 KSIA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAI  338 (425)
T ss_pred             cccc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            9964 899999999975        5777776543 3456788999999999998743 234444444444444444443


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDG  404 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~  404 (419)
                      +...|.+..+ .. .|+++|+.+.....   +.......+...+ .++||.+.|+..+  .+.+|++++  .++++|+++
T Consensus       339 ~~~~~~~~~v-~g-~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~-~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~  413 (425)
T PRK08088        339 AEKHPEIGDV-RG-LGAMIAIELFEDGDHSKPNAKLTAQIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQG  413 (425)
T ss_pred             HHhCCCeEEE-ec-cceEEEEEEecCCCCCCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHH
Confidence            3445443322 22 28889999842110   0001245566565 5679998886554  478999995  579999999


Q ss_pred             HHHHHHHHHH
Q 014769          405 LGRMKAFCQR  414 (419)
Q Consensus       405 l~~l~~~~~~  414 (419)
                      +++|++++++
T Consensus       414 i~~l~~~l~~  423 (425)
T PRK08088        414 LEIIAQCFDE  423 (425)
T ss_pred             HHHHHHHHHh
Confidence            9999999875

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.95  E-value=1.6e-24  Score=198.96  Aligned_cols=328  Identities=20%  Similarity=0.169  Sum_probs=244.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC-C-----CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-K-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +++++||+.+|   +..+..+|.+++++.++++.. .     -.-++...-..+|++.+|+|+        ..+..++.+
T Consensus        38 ~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f~  106 (388)
T COG0156          38 GRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLFS  106 (388)
T ss_pred             CceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEEc
Confidence            68899999998   456778899999999988762 1     112344444578889999987        346788888


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---C---ccEEEEeC
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---N---TAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~---~~~v~i~~  188 (419)
                      ++-.++..++.++++++|.|+.....|-+..+.++..+.+++.+.+       .|++.|++.+.+   .   .+.|+...
T Consensus       107 SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivteg  179 (388)
T COG0156         107 SGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEG  179 (388)
T ss_pred             ccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEec
Confidence            8899999999999999999999999999999999999999888875       377888888765   1   34444445


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc--CCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--GSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      .-...|.+.|   |++|++++++|+.++++||+|+...++..+......+  ......|+++||||++|..|   ||+.+
T Consensus       180 VfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g  253 (388)
T COG0156         180 VFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAG  253 (388)
T ss_pred             cccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeC
Confidence            6678999999   9999999999999999999999988875543333333  22334799999999999988   99998


Q ss_pred             eCCCCccchhhHHHHHHhhh-cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769          267 NDPNGIFQKSGIIDSIKDCL-SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE  343 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  343 (419)
                      +.        .+++.++... .+  +.+.++....++.++++.  -+...+.+++++++...+++.++.. ++. + .+.
T Consensus       254 ~~--------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~--l~~~~~~r~~L~~~~~~~~~~~~~~-~~~-~-~~s  320 (388)
T COG0156         254 SA--------ALIDYLRNRARPFIFSTALPPAVAAAALAALRI--LEEGPERRERLQELAAFFRSLLKAL-GLV-L-LPS  320 (388)
T ss_pred             cH--------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc-CCc-c-CCC
Confidence            76        6888888763 32  334455555556666654  2345566778888888888666655 555 3 455


Q ss_pred             ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC---CeEEEEee--cCHHHHHHHHHHHHHH
Q 014769          344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFC--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~~Ris~~--~~~~~l~~~l~~l~~~  411 (419)
                      ...++.+.+.+.     ....++...|+++ ||.+.+...+..+   ..+|+++.  .++++|+.+++.+.++
T Consensus       321 ~s~I~pv~~gd~-----~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         321 ESPIIPVILGDE-----ERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             CCCeeeeEeCCH-----HHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence            555555555432     1256677777666 9999888777653   67999993  6899999999998764

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.94  E-value=3.1e-24  Score=202.82  Aligned_cols=223  Identities=21%  Similarity=0.247  Sum_probs=159.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g  152 (419)
                      +.+|+.+ -..+|++.+|+++      +.  +..+++++++.++..++.+++++||+|+++.|.|.++...    +...|
T Consensus        59 y~r~~~p-~~~~Le~~lA~l~------G~--~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G  129 (398)
T PRK07504         59 YSRYSNP-TVDMFEKRMCALE------GA--EDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYG  129 (398)
T ss_pred             eecCCCc-hHHHHHHHHHHHh------CC--CeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence            3456553 4689999999987      33  3345577888999888888889999999999999875433    34567


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++       ..|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|....+.    
T Consensus       130 ~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~----  195 (398)
T PRK07504        130 IESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ----  195 (398)
T ss_pred             eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence            7777764       26899999999889999999999999999999   889999999999999999999864432    


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDF  311 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~  311 (419)
                      .++ .++   ..+++.|+||.++.+|.++|++++.+++      .+.+.++... ......++...+.+...|+     .
T Consensus       196 ~~~-~~g---aDivv~S~sK~l~g~g~~~GG~vv~~~~------~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~-----t  260 (398)
T PRK07504        196 KPL-ELG---AHIVVYSATKHIDGQGRCLGGVVLSDKA------WIEEHLQDYFRHTGPSLSPFNAWTLLKGLE-----T  260 (398)
T ss_pred             Cch-hhC---CCEEEeeccccccCCccceEEEEEeCcH------HHHHHHHHHHHHhCCCCCHHHHHHHHhccc-----h
Confidence            111 222   2378999999999999999754443321      1223344332 2233344444444433333     3


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          312 FCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      +..+.++..++...+.+.|+++|++.
T Consensus       261 l~~R~~~~~~na~~la~~L~~~p~v~  286 (398)
T PRK07504        261 LPVRVRQQTESAAAIADFLAGHPKVA  286 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence            56666667788888888888776654

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=1.6e-24  Score=203.59  Aligned_cols=295  Identities=16%  Similarity=0.168  Sum_probs=203.4

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhc
Q 014769           76 KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRK  151 (419)
Q Consensus        76 ~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~  151 (419)
                      .+.+|+++ ....|++++|++.      +  .+++++++|+++++..++.+++++||+|++++|+|.+....+    ...
T Consensus        45 ~Y~R~~~p-t~~~L~~~lA~l~------g--~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~  115 (386)
T PRK08045         45 DYSRRGNP-TRDVVQRALAELE------G--GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRG  115 (386)
T ss_pred             eeeCCCCc-cHHHHHHHHHHHh------C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence            35566664 5689999999987      2  246999999999999999999999999999999998643322    223


Q ss_pred             CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC
Q 014769          152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP  231 (419)
Q Consensus       152 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  231 (419)
                      +.++..++       ..|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|.....    
T Consensus       116 gi~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~----  181 (386)
T PRK08045        116 CYRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL----  181 (386)
T ss_pred             CeEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----
Confidence            34554442       25789999999888999999999999999999   78889999999999999999986432    


Q ss_pred             CCCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch
Q 014769          232 YTPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       232 ~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~  309 (419)
                      ..++ .++.+   +++.|++|.++. ++.+.|++++.++       ++.+.++... ......++..++.+...|+.   
T Consensus       182 ~~pl-~~gaD---ivv~S~tK~l~G~~d~~~G~vi~~~~-------~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---  247 (386)
T PRK08045        182 QNPL-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGLRT---  247 (386)
T ss_pred             CCch-hhCCC---EEEeecceeccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc---
Confidence            1222 22332   889999999763 4578999887542       4666665443 33456677777777777764   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKE  373 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~  373 (419)
                        +..+.++..+++..+.+.|+.+|.+..|..|.                .|-.+.+.++..    ......|++.| +-
T Consensus       248 --l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l-~~  320 (386)
T PRK08045        248 --LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD----EQTLRRFLGGL-SL  320 (386)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc----HHHHHHHHHhc-cc
Confidence              77778888899999999999877654343331                233444556421    01123444444 32


Q ss_pred             cCeEeecCCCC----------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          374 ESVIVTPGIYV----------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       374 ~gv~v~~g~~~----------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ..+.++-|...                      |. ++.+|||+|.+  +.+.+++.|.+++++..
T Consensus       321 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~~~  384 (386)
T PRK08045        321 FTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIE--DGEDLIADLENGFRAAN  384 (386)
T ss_pred             eeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcC--CHHHHHHHHHHHHHHhh
Confidence            22222222211                      00 35899999974  56677777777776544

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.94  E-value=2e-24  Score=204.18  Aligned_cols=339  Identities=14%  Similarity=0.102  Sum_probs=217.6

Q ss_pred             eeccCCCCCCCCCCCChHHHHHHHHHHHhC-C-----CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-G-----KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~-----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      +||+..+   +..+..+|+++++..++++. +     ....|+...+..+|++.+|+++.      . .+.+++++|.++
T Consensus         1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g------~-e~al~~~sG~~a   70 (392)
T PLN03227          1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG------T-ESAILYSDGAST   70 (392)
T ss_pred             CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC------C-CcEEEecCcHHH
Confidence            3566665   34577889999999998864 1     12247766678899999999983      2 355666666665


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-----------CCccEEEEe
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-----------KNTAAMVII  187 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~i~  187 (419)
                      .. .++.+++++||.|+++++.|.++...+...+.++..++...    .-+++.+.+.+.           +++++|++.
T Consensus        71 ~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d----~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E  145 (392)
T PLN03227         71 TS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND----MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVE  145 (392)
T ss_pred             HH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC----HHHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence            55 77777899999999999999988877777777777665421    113333333332           246777888


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc--cC-CCCcEEEEecCCCcCCCCCceeEEE
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL--FG-SIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      .+.||+|.+.|   ++++.++|+++|+++|+||+|+...++..+......  .. ..+..+++.|+||.++..   .|++
T Consensus       146 ~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v  219 (392)
T PLN03227        146 GLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMT  219 (392)
T ss_pred             CCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEE
Confidence            88999999999   889999999999999999999843332211111111  11 122358888999986544   4888


Q ss_pred             EeeCCCCccchhhHHHHHHhhh-ccccCC--chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-
Q 014769          265 VTNDPNGIFQKSGIIDSIKDCL-SIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN-  340 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-  340 (419)
                      +++.        ++++.++... ...++.  ++..+.++...+....  ..++..++++++.+++++.|++. ++..+. 
T Consensus       220 ~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~--~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~  288 (392)
T PLN03227        220 VGSE--------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGEL--AGPQLLNRLHDSIANLYSTLTNS-SHPYALK  288 (392)
T ss_pred             ecCH--------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHhc-CCccccc
Confidence            7754        4666665432 222222  3545555555554321  13456777888888888888752 221111 


Q ss_pred             --------CCCceEEEEeecCcccccC-CC---CHHHHHHHHHHhcCeEeecCC-------CCCCCCeEEEEe--ecCHH
Q 014769          341 --------KPEGSMVTMVKLNPWLLED-IN---DDIEFALKLAKEESVIVTPGI-------YVGLKNWLRIAF--CAEPS  399 (419)
Q Consensus       341 --------~p~~g~~~~~~~~~~~~~~-~~---~~~~~~~~ll~~~gv~v~~g~-------~~~~~~~~Ris~--~~~~~  399 (419)
                              ....++++.+.+.+..... ..   ...++...+ .++|+.+.+..       .+..+..+|+++  ..++|
T Consensus       289 ~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~e  367 (392)
T PLN03227        289 LRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHS-LSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTRE  367 (392)
T ss_pred             cccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHH-HHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHH
Confidence                    1123445556664311000 00   013555555 56799986522       122356789999  46999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 014769          400 ALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~~~  416 (419)
                      +|+++++.|++++++..
T Consensus       368 ei~~~~~~l~~~~~~~~  384 (392)
T PLN03227        368 DIDKLLTVLGEAVEAIL  384 (392)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998764

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=3.8e-24  Score=202.12  Aligned_cols=222  Identities=17%  Similarity=0.169  Sum_probs=162.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC----cHHHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g  152 (419)
                      +.+|+++ ....|++.++++.      +. .+. ++++++++++..++.++.++||.|+++.|+|.+    +...+...|
T Consensus        54 y~R~~~p-~~~~Le~~lA~l~------g~-~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g  124 (405)
T PRK08776         54 YTRSGNP-TRDLLGEALAELE------GG-AGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGH  124 (405)
T ss_pred             ccCCCCh-HHHHHHHHHHHHh------CC-Cce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcC
Confidence            3445543 3568888888876      22 334 555556899999999999999999999999986    344455567


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      .++..++.       .|++.+++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|....    ..
T Consensus       125 ~~v~~v~~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~----~~  190 (405)
T PRK08776        125 FALITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPA----LQ  190 (405)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccc----cC
Confidence            77776653       3788999988888999999999999999987   8999999999999999999997522    12


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .++ .++.+   +++.|.+|.++.+ +...|+++++++       ++.+++...... ....++..+.++...+     +
T Consensus       191 ~pl-~~gaD---ivv~S~tK~l~g~~~~~~G~vv~~~~-------~l~~~l~~~~~~~g~~~s~~~a~l~~~gl-----~  254 (405)
T PRK08776        191 KPL-EFGAD---LVLHSTTKYINGHSDVVGGAVVARDA-------ELHQQLVWWANALGLTGSPFDAFLTLRGL-----R  254 (405)
T ss_pred             Ccc-cccCC---EEEecCceeecCCCCceEEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----C
Confidence            222 23333   8889999998766 477898887542       466666544322 3345666665555444     4


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      +++.+.++..++...+.+.|+++|.+.
T Consensus       255 tl~~r~~~~~~na~~la~~L~~~p~v~  281 (405)
T PRK08776        255 TLDARLRVHQENADAIAALLDGHAAVN  281 (405)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence            477788888999999999998876554

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.94  E-value=2.2e-24  Score=202.54  Aligned_cols=227  Identities=16%  Similarity=0.168  Sum_probs=165.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g  152 (419)
                      +.+|+++ -..+|+++++++.      +  .+++++++|+++++..++.+++++||.|+++.|+|.+....+    ...+
T Consensus        45 Y~R~~~p-~~~~le~~lA~l~------g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~  115 (382)
T TIGR02080        45 YSRSGNP-TRDLLQQALAELE------G--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC  115 (382)
T ss_pred             ccCCCCc-hHHHHHHHHHHHh------C--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence            5567654 4689999999987      2  468999999999999999999999999999999998644333    2223


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      ..+..++       ..|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|..+...    
T Consensus       116 ~~v~~~d-------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----  181 (382)
T TIGR02080       116 FRVLFVD-------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ----  181 (382)
T ss_pred             eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            4444432       13789999999888999999999999999999   788999999999999999999864322    


Q ss_pred             CCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .++ .++.   .++++|+||.++. ++++.|+++++++       ++.++++..... ....++...+.+..-+     +
T Consensus       182 ~pl-~~ga---Divv~S~sK~l~G~~~~~~G~i~~~~~-------~~~~~l~~~~~~~g~~~sp~~a~l~lr~l-----~  245 (382)
T TIGR02080       182 NPL-ALGA---DLVLHSCTKYLNGHSDVIAGAVIAKDP-------QVAEELAWWANNLGVTGGAFDSYLTLRGL-----R  245 (382)
T ss_pred             Cch-hhCC---CEEEeecceeccCCCCceeEEEEeCCH-------HHHHHHHHHHHccCCCCCHHHHHHHHccc-----c
Confidence            122 1222   2888999998764 6789999887552       466777665543 3445555544443222     3


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      .+..+.++..++...+.+.|+.+|.+..|..|
T Consensus       246 tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP  277 (382)
T TIGR02080       246 TLVARMRLQQRNAQAIVEYLQTQPLVKKIYYP  277 (382)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            35555667778888889999877655433333

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.94  E-value=4.6e-24  Score=204.77  Aligned_cols=339  Identities=13%  Similarity=0.063  Sum_probs=214.6

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC------CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      ..+.++|..+..      ++++.+++++...+......+++      ...-...+.+...+.+.+.+|  .+..+|++++
T Consensus        24 ~~~~~~l~~~~n------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~i~~~s   95 (416)
T PRK00011         24 QEEHIELIASEN------FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--AEYANVQPHS   95 (416)
T ss_pred             HhcCeeeecccC------cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceeeecCC
Confidence            567789888852      36788988887664321100111      111122333312223333333  4455666655


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH-----HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeC
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEG-----IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~  188 (419)
                       +++++..++.+++++||+|+++.|+|.++..     .+...|.+++.+++++ .++.+|++++++++++ +++++++++
T Consensus        96 -gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~  173 (416)
T PRK00011         96 -GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGA  173 (416)
T ss_pred             -chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECC
Confidence             4779999999999999999999999975421     1223356677766643 2467999999999864 678888776


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      +++|  ...+   +++|.++|+++|+++|+|++|... .+.+.....+.  .   ..++++|+||++  +|+|.||++++
T Consensus       174 ~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~---~di~~~S~~K~l--~g~~gg~i~~~  241 (416)
T PRK00011        174 SAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--H---ADVVTTTTHKTL--RGPRGGLILTN  241 (416)
T ss_pred             CcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--C---CcEEEecCCcCC--CCCCceEEEeC
Confidence            5554  4456   899999999999999999998642 22222122222  1   237789999974  78899999986


Q ss_pred             CCCCccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769          268 DPNGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS  345 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  345 (419)
                      ++       ++.+.++.....  ..++....+.++..++.....+++++..++++++++.+.+.|+++ |+.+......+
T Consensus       242 ~~-------~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  313 (416)
T PRK00011        242 DE-------ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDN  313 (416)
T ss_pred             CH-------HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCC
Confidence            42       466777655422  122223333333333332223456788889999999999999987 77632111234


Q ss_pred             EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC-C-----CCCCeEEEEe------ecCHHHHHHHHHHHHHHHH
Q 014769          346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY-V-----GLKNWLRIAF------CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~-----~~~~~~Ris~------~~~~~~l~~~l~~l~~~~~  413 (419)
                      +++|+.+++..    .+..++.. .|+++||.+..+.. +     ..+..+|++.      +.++++++.+++.|++++.
T Consensus       314 ~~~~i~~~~~~----~~~~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~  388 (416)
T PRK00011        314 HLVLVDLRSKG----LTGKEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD  388 (416)
T ss_pred             eEEEEeCcccC----CCHHHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence            88888885321    13455554 45788999974321 1     1245799965      3468999999999998865


Q ss_pred             H
Q 014769          414 R  414 (419)
Q Consensus       414 ~  414 (419)
                      .
T Consensus       389 ~  389 (416)
T PRK00011        389 N  389 (416)
T ss_pred             c
Confidence            4

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.94  E-value=3.8e-24  Score=201.89  Aligned_cols=219  Identities=19%  Similarity=0.228  Sum_probs=161.0

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~  160 (419)
                      -..++++.+++++        +.+++++++|+++|+..++.+++++||+|+++.+.|.+..    ..+...|++++.+++
T Consensus        62 ~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  133 (390)
T PRK08133         62 TVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL  133 (390)
T ss_pred             HHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence            4678999999987        2357899999999999999999999999999999997643    345668988888765


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      +       |++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|......    .++ ..+.
T Consensus       134 ~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~----~pl-~~g~  198 (390)
T PRK08133        134 T-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ----QPL-KLGA  198 (390)
T ss_pred             C-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hhCC
Confidence            2       678899999888999999999999999998   899999999999999999998754321    111 2222


Q ss_pred             CCcEEEEecCCCcCCCCCceeEE-EEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGW-LVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                         .+++.|+||.++.+|.++|+ +++++        ++++.+..... .....++..+.   .++..  -+.+..+.++
T Consensus       199 ---Divv~S~sK~~~g~g~~~GG~vv~~~--------~~~~~~~~~~~~~g~~~~~~~a~---~~l~g--l~tl~~R~~~  262 (390)
T PRK08133        199 ---DVVIHSATKYLDGQGRVLGGAVVGSK--------ELMEEVFGFLRTAGPTLSPFNAW---VFLKG--LETLSLRMEA  262 (390)
T ss_pred             ---cEEEeecceeecCCcceEeEEEEcCH--------HHHHHHHHHHHHhCCCCCHHHHH---HHHcc--cchHHHHHHH
Confidence               37899999999889999854 55433        34555544332 22233433333   23332  2346666677


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          319 LRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ..++...+.+.|++.|++..+..|
T Consensus       263 ~~~~a~~la~~L~~~p~v~~v~yp  286 (390)
T PRK08133        263 HSANALALAEWLEAHPGVERVFYP  286 (390)
T ss_pred             HHHHHHHHHHHHHhCCCeeEEECC
Confidence            778888999999887765544333

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.94  E-value=3.9e-24  Score=204.29  Aligned_cols=333  Identities=14%  Similarity=0.105  Sum_probs=221.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+|+.++||..|..+.. .-.-+|.+.+++.++++...... +.......++.+.++++.        ..+.++++++++
T Consensus        38 ~~g~~~lD~~~~~~~~~-~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs  108 (401)
T PRK00854         38 TDGNRYLDCLSAYSAVN-QGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGA  108 (401)
T ss_pred             CCCCEEEEcCcchhhcc-CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcH
Confidence            35788999888743211 11247899999999987643211 112223445666666654        235899999999


Q ss_pred             HHHHHHHHHhcC---------CC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHH
Q 014769          118 QAVEVILSVLAR---------PG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus       118 ~al~~~~~~l~~---------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~  174 (419)
                      +|++.+++.+..         +| ++|++...+|++....+...+..             +..++       -.|++.++
T Consensus       109 ~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le  181 (401)
T PRK00854        109 EAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALE  181 (401)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHH
Confidence            999999998852         23 68898888888764433332221             11111       13789999


Q ss_pred             HhhcCCccEEEEeCCCCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc
Q 014769          175 ALADKNTAAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR  253 (419)
Q Consensus       175 ~~~~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  253 (419)
                      +.+.+++++|++.+|+||+|.+++ .+++++|.++|++||+++|+||+|.++.+.|.... ....+....+++   ++|.
T Consensus       182 ~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~-~~~~g~~~D~~~---~~K~  257 (401)
T PRK00854        182 AAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLA-EEHEGIEADVTL---IGKA  257 (401)
T ss_pred             HHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhH-HhhcCCCCCEEE---eccc
Confidence            999888899999999999999887 56799999999999999999999987655543211 111111112232   4699


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      ++...+|+|++++++        ++++.++... ..+++.+++.+.++.+.|+....   ....++++++.+.+.+.|++
T Consensus       258 l~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~  326 (401)
T PRK00854        258 LSGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRS  326 (401)
T ss_pred             ccCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHh
Confidence            755447999999976        5666665432 23455688888888888865221   23567778888888888887


Q ss_pred             CCCCCCC--CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769          333 IPCISCP--NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM  408 (419)
Q Consensus       333 ~~~~~~~--~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l  408 (419)
                      + +...+  ..+.+.++. +.+....    .+..+++..|+ ++||.+.+..    .+++|+++  ..++++|++++++|
T Consensus       327 ~-~~~~~~~~~g~g~~~~-i~~~~~~----~~~~~~~~~L~-~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l  395 (401)
T PRK00854        327 I-RSNIVREVRGRGLMLA-VELEPEA----GGARQYCEALK-ERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQI  395 (401)
T ss_pred             h-ccCceEEEeccceEEE-EEEecCc----hhHHHHHHHHH-HCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence            6 22211  123344444 3342110    13567777775 4699987532    47999997  46899999999999


Q ss_pred             HHHHH
Q 014769          409 KAFCQ  413 (419)
Q Consensus       409 ~~~~~  413 (419)
                      ++++.
T Consensus       396 ~~~l~  400 (401)
T PRK00854        396 AKVLA  400 (401)
T ss_pred             HHHhh
Confidence            98764

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=2.9e-24  Score=202.65  Aligned_cols=219  Identities=15%  Similarity=0.163  Sum_probs=162.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCE
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVE  154 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~  154 (419)
                      +|+. +-..++++.++++.      +  .+..++++++++|+..++.+++++||.|+++.|+|.+..    ..+...|++
T Consensus        60 r~~~-p~~~~le~~lA~l~------g--~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~  130 (398)
T PRK08249         60 RNTN-PTVQAFEEKVRILE------G--AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVD  130 (398)
T ss_pred             CCCC-hHHHHHHHHHHHHh------C--CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence            3444 45689999999997      2  346777788899999999999999999999999998653    334567877


Q ss_pred             EEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769          155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP  234 (419)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  234 (419)
                      +..++.       .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+......    +
T Consensus       131 v~~vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----~  196 (398)
T PRK08249        131 VTLCET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN----P  196 (398)
T ss_pred             EEEcCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC----c
Confidence            766542       4889999999888999999999999999999   8889999999999999999998644221    1


Q ss_pred             ccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHH
Q 014769          235 MGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFF  312 (419)
Q Consensus       235 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~  312 (419)
                      + ..+.+   +++.|+||.++.+|.++ |+++++.        ++++.++..... ....++..++.+...++     .+
T Consensus       197 l-~~~~D---ivv~S~sK~l~g~~~~~gG~vv~~~--------~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tL  259 (398)
T PRK08249        197 L-ALGAD---LVIHSATKFLSGHADALGGVVCGSK--------ELMEQVYHYREINGATMDPMSAYLILRGMK-----TL  259 (398)
T ss_pred             h-hhCCC---EEeccCceecCCCCCceEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhCcc-----hH
Confidence            2 12222   78899999988778776 5555432        567777655442 33455555554444333     35


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      ..+.++..+++..+.+.|+++|.+.
T Consensus       260 ~~R~~~~~~na~~la~~L~~~p~v~  284 (398)
T PRK08249        260 KLRVRQQQESAMALAKYLQTHPKVE  284 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCee
Confidence            5666777888888899998766544

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=4.3e-24  Score=199.93  Aligned_cols=295  Identities=15%  Similarity=0.135  Sum_probs=199.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g  152 (419)
                      +.+|+.+ ....|++++|++.        +.+++++++|+++++..++.+++++||.|+++.|+|.+....    ....|
T Consensus        47 Y~R~~np-t~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g  117 (388)
T PRK08861         47 YTRSGNP-NRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD  117 (388)
T ss_pred             ccCCCCc-hHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence            4556653 5789999999997        258999999999999999999999999999999999864332    23345


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++.       .|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|....+.    
T Consensus       118 i~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----  183 (388)
T PRK08861        118 FKVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----  183 (388)
T ss_pred             eEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence            66666541       4789999999888999999999999999999   788899999999999999999864332    


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .++ .++.+   +++.|++|.++.+ +...|+++++++       ++.+.++..... ....++...+.+..-|+.    
T Consensus       184 ~pl-~~GaD---ivv~S~tK~l~G~~d~~gG~i~~~~~-------~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T----  248 (388)
T PRK08861        184 KPL-ELGAD---FVIHSTTKYINGHSDVIGGVLITKTK-------EHAEELAWWGNCIGATGTPFDSYMTLRGIRT----  248 (388)
T ss_pred             CCc-ccCCC---EEEeecceeccCCCcceeEEEEecHH-------HHHHHHHHHHhccCCCCChHHHHHHHhcCCC----
Confidence            122 23333   8899999997764 467898887542       455666654432 344455555544444433    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEE  374 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  374 (419)
                       +.-+.++..++...+.+.|+.+|.+..|..|.                .|-.+.+.+...    ......|++.| +-.
T Consensus       249 -l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~----~~~~~~f~~~l-~l~  322 (388)
T PRK08861        249 -LGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGS----FEQLKVFVKAL-ALF  322 (388)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCC----HHHHHHHHhcC-Ccc
Confidence             55566677788888888998877654343332                233445556421    01123343333 222


Q ss_pred             CeEeecCCCC----------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769          375 SVIVTPGIYV----------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       375 gv~v~~g~~~----------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .+.++-|...                      |. ++.+|+|+|.+  +.+.+++.|++++++.++
T Consensus       323 ~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE--~~~dli~Dl~~al~~~~~  386 (388)
T PRK08861        323 SLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLE--DAQDLIADLDQAFAKAAE  386 (388)
T ss_pred             eEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcC--CHHHHHHHHHHHHHHHHh
Confidence            2222222110                      00 35799999974  566677777777776554

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.94  E-value=8.1e-24  Score=200.07  Aligned_cols=335  Identities=12%  Similarity=0.119  Sum_probs=229.0

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~  117 (419)
                      .+|+.+|||..|.-..  .++.+|++.+++.+++....  .+.. ....++++.+++.+..      .++ .++++++++
T Consensus        26 ~dg~~~lD~~s~~~~~--~lG~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGs   94 (375)
T PRK04260         26 TDGKKYLDFSSGIGVT--NLGFHPQVQQALQKQAGLIW--HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGA   94 (375)
T ss_pred             CCCCEEEECCCCcccc--cCCCCHHHHHHHHHHHHhcC--cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccH
Confidence            4588899998874322  24558889999999986532  2222 2346788899987732      233 468999999


Q ss_pred             HHHHHHHHHhc--CCCCeEEeeCCCCCCcH-HHHhhcCCEEEE--Ee-ccCCCC--cccChHHHHHhhcCCccEEEEeCC
Q 014769          118 QAVEVILSVLA--RPGANVLLPRPGWPYYE-GIAQRKQVEVRH--FD-LLPERN--WEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       118 ~al~~~~~~l~--~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~--~~-~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      +++..+++...  .++++|++.+.+|++.. ..+...+.+...  +. ......  .-.|++.+++.++++..++++..+
T Consensus        95 eA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v  174 (375)
T PRK04260         95 EANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELV  174 (375)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCe
Confidence            99998888763  24578999999988643 222222211100  00 000000  013788898888766677778888


Q ss_pred             CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          190 GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       190 ~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      +|++|.. .+.+.++++.++|+++|+++|+||+|.++...+..+ .....+..++   +.||||.+ .+|+|+||+++++
T Consensus       175 ~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l-~~G~~ig~~~~~~  249 (375)
T PRK04260        175 QGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGL-ANGVPVGAMLAKS  249 (375)
T ss_pred             ECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEecccc-cCCcceEEEEEcH
Confidence            9999986 457889999999999999999999998876555322 2112222222   23899996 4799999999976


Q ss_pred             CCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 014769          269 PNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM  346 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  346 (419)
                              ++.+.+... ...+++.+++.+.++.++|+... .+..++.++..+..++.+.+.+.+.+.+. . .+..|+
T Consensus       250 --------~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~g~  319 (375)
T PRK04260        250 --------SLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVT-T-VRGLGY  319 (375)
T ss_pred             --------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCee-E-Eeccce
Confidence                    566666543 22356678888999988887643 35566666777777777777776654333 1 345799


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHH
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAF  411 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~  411 (419)
                      ++|++++.       +..++..++ .++||.+.|+.    .+.+|+++  ..+++++++++++|+++
T Consensus       320 ~~~~~~~~-------~~~~~~~~l-~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        320 MIGIETTA-------DLSQLVEAA-RDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV  374 (375)
T ss_pred             EEEEEecC-------cHHHHHHHH-HhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence            99998842       356676666 56799998752    47899999  35899999999999875

>PRK06460 hypothetical protein; Provisional

Probab=99.94  E-value=4.7e-24  Score=200.30  Aligned_cols=221  Identities=15%  Similarity=0.142  Sum_probs=158.0

Q ss_pred             CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCC----CcHHHHhhcCCEEEEE
Q 014769           83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP----YYEGIAQRKQVEVRHF  158 (419)
Q Consensus        83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~----~~~~~~~~~g~~~~~~  158 (419)
                      .....+|+++++++.      +.+ ..+++ +++++++..++.+++++||+|+++.|.|.    .+...++..|.++..+
T Consensus        44 ~p~~~~L~~~lA~l~------g~~-~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~  115 (376)
T PRK06460         44 NPTVLELTKKIVELE------NAE-MGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS  115 (376)
T ss_pred             CccHHHHHHHHHHHh------CCC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence            357789999999998      332 34444 55579999999999999999999987664    3456677889888776


Q ss_pred             eccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                      +.+       +.+.++..+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|....    ...++ ..
T Consensus       116 ~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~----~~~~l-~~  180 (376)
T PRK06460        116 NPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPI----NQKPL-EL  180 (376)
T ss_pred             CCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccc----cCChh-hc
Confidence            642       223445555667899999999999999999   6778999999999999999997532    11111 11


Q ss_pred             CCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                         +..+++.|+||.++.. +.++||++++.        ++++.++..... ....++.   .+..++..  .++++.+.
T Consensus       181 ---~~divv~S~sK~l~G~~~~~~G~~~~~~--------~l~~~l~~~~~~~g~~~~~~---~a~~~l~~--~~~l~~r~  244 (376)
T PRK06460        181 ---GADIVVHSASKFLAGHNDVIAGLAAGYG--------KLLNVIDQMRRTLGTSLDPH---AAYLTLRG--IKTLKIRM  244 (376)
T ss_pred             ---CCCEEEeecceeccCCCCceEEEEecCH--------HHHHHHHHHHHhcCCCCCHH---HHHHHHhc--hhhHHHHH
Confidence               2358899999987533 36899998754        577777765432 2223332   23333332  46788888


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          317 DTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      +++.++++.+.+.|+++|.+..+..|
T Consensus       245 ~~~~~n~~~l~~~L~~~p~v~~v~yp  270 (376)
T PRK06460        245 DVINRNAEQIAEFLEGHPKVVKVYYP  270 (376)
T ss_pred             HHHHHHHHHHHHHHHcCCCccEEECC
Confidence            89999999999999987765434343

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.94  E-value=8.1e-26  Score=195.12  Aligned_cols=376  Identities=17%  Similarity=0.186  Sum_probs=270.2

Q ss_pred             ccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCCCCCCCCCCCHHH
Q 014769           11 FEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPA   89 (419)
Q Consensus        11 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~l   89 (419)
                      ++|++.+.++++++|.++++.+.    ++.+++.|||+.|.-......| +-+.|++|-...+.......|.|..|++++
T Consensus        25 ~s~~s~V~maPpDpILGVTeAfk----~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF  100 (427)
T KOG1411|consen   25 SSWWSHVEMAPPDPILGVTEAFK----KDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEF  100 (427)
T ss_pred             cchhhcCCCCCCCCcccHHHHHh----cCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHH
Confidence            36788888999999999998654    4568899999999433222223 457777776655544445689999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769           90 RRAIADYLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN  165 (419)
Q Consensus        90 r~~ia~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  165 (419)
                      .+..++++.......+..++|+.  |-++|.++......+..  ++..|.+++|+|..+..+++..|+.+..+.......
T Consensus       101 ~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t  180 (427)
T KOG1411|consen  101 NKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKT  180 (427)
T ss_pred             HHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccc
Confidence            99999998543333345566644  67889999888877754  789999999999999999999999988777655555


Q ss_pred             cccChHHHHHhhcCCc-cEEEEe--CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--CCCcccc-C
Q 014769          166 WEVDLDAVEALADKNT-AAMVII--NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLF-G  239 (419)
Q Consensus       166 ~~~~~~~l~~~~~~~~-~~v~i~--~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~  239 (419)
                      .++|.+.+...+...+ ..+++.  ..|||||+-.+.+.|++|.++.++.+.+-+.|.+|++|..+...  ...+..+ .
T Consensus       181 ~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~  260 (427)
T KOG1411|consen  181 RGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE  260 (427)
T ss_pred             cccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH
Confidence            6788887766665432 233444  44999999999999999999999999999999999998755321  1111122 2


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEE--EeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc--hHH---
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWL--VTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK--EDF---  311 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~--~~~---  311 (419)
                      ...+++++.|++|.+|+.|-|+|.+  +|.+.+...   .+...++.. +...++|+......+..+|....  .+|   
T Consensus       261 ~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~---rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~e  337 (427)
T KOG1411|consen  261 DGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAK---RVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGE  337 (427)
T ss_pred             cCCceEeehhhhhhcchhhhccceeEEEecCHHHHH---HHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHH
Confidence            2346899999999999999999996  444321111   122233333 24456777778888888887643  344   


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC--CC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCC
Q 014769          312 FCKLIDTLRESAEICYDGVKEI--PC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKN  388 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~  388 (419)
                      +..+.+++...+..+.+.|+..  ++ +. ....+-|||.+..++          .+.++.|.+++.|+++...      
T Consensus       338 vk~MadRi~~mR~~L~d~L~~~gs~~~W~-hI~~QIGMF~fTgl~----------peQv~~l~ke~~iYmT~dG------  400 (427)
T KOG1411|consen  338 VKGMADRIISMRQQLFDALEKEGSPGNWS-HITKQIGMFCFTGLN----------PEQVDWLTKEYHIYLTKDG------  400 (427)
T ss_pred             HHHHHHhhhhhHHHHhHHhhcCCCCccHH-HHHHhhheeeecCCC----------HHHHHHHHhhheeeeccCc------
Confidence            4456788888999999998863  22 33 335677999987774          3456788899999986432      


Q ss_pred             eEEEEe-ecCHHHHHHHHHHHHHHH
Q 014769          389 WLRIAF-CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       389 ~~Ris~-~~~~~~l~~~l~~l~~~~  412 (419)
                        |||+ +.+...+..+.+.|.++.
T Consensus       401 --RiS~aG~ss~nV~yLa~aih~vt  423 (427)
T KOG1411|consen  401 --RISMAGLSSSNVPYLADAIHAVT  423 (427)
T ss_pred             --eEeeccccccCCcccchhhHhHh
Confidence              9999 567677777777776654

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.94  E-value=1.2e-23  Score=201.14  Aligned_cols=348  Identities=15%  Similarity=0.134  Sum_probs=220.4

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||..|..... .-..+|.+.+++.++++.....  ... -..+..+.+.+.+.+..+    .+.+++++++++
T Consensus        28 ~dg~~~lD~~~~~~~~~-~Gh~~p~v~~a~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~   99 (400)
T PTZ00125         28 VEGKKYYDFLSAYSAVN-QGHCHPKILAALINQAQKLTLT--SRA-FYNDVLGLAEKYITDLFG----YDKVLPMNSGAE   99 (400)
T ss_pred             CCCCEEEEcccCHhhcc-CCcCCHHHHHHHHHHHHhcccc--ccc-ccCHHHHHHHHHHHhCCC----CCEEEEeCCcHH
Confidence            45888999988743321 1125789999999988653221  111 112333444444443222    368999999999


Q ss_pred             HHHHHHHHhcC----------CCCeEEeeCCCCCCcHHHHhhcCCEEEEE----eccCCC--CcccChHHHHHhhc-CCc
Q 014769          119 AVEVILSVLAR----------PGANVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPER--NWEVDLDAVEALAD-KNT  181 (419)
Q Consensus       119 al~~~~~~l~~----------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~----~~~~~~--~~~~~~~~l~~~~~-~~~  181 (419)
                      |++.+++.+..          .+++|++.+-+|++...............    +..+.-  -.-.|++.+++.+. +++
T Consensus       100 A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  179 (400)
T PTZ00125        100 AGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNV  179 (400)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCe
Confidence            99999997741          34789999999887644333222111110    000000  00137899999886 467


Q ss_pred             cEEEEeCCCCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          182 AAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       182 ~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      ++|++..++||||.+++ .+++++|.++|++||+++|+||+|.++.+.|..+. ....+....++   ++||.++.+++|
T Consensus       180 ~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~-~~~~~~~pd~~---~~sK~l~~g~~~  255 (400)
T PTZ00125        180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLA-HDHEGVKPDIV---LLGKALSGGLYP  255 (400)
T ss_pred             EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhH-HHhcCCCCCEE---EEcccccCCCcC
Confidence            77777777999999885 66799999999999999999999987766554321 11112111223   478997654469


Q ss_pred             eEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc----CCC
Q 014769          261 FGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE----IPC  335 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~  335 (419)
                      +||+++++        ++++.+.... ..+++.+++.+.++.++++....+.+   .++++++.+.+.+.|++    .+.
T Consensus       256 ig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~  324 (400)
T PTZ00125        256 ISAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPW  324 (400)
T ss_pred             cEEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999976        5777765432 23456678888888777654322222   23344444555555544    222


Q ss_pred             CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~  413 (419)
                      +. ...+ .|.+.++.++...   ..+..++..+|+ ++||.+.|+.    .+++||++  ..+++++++++++|.++++
T Consensus       325 ~~-~~~~-~g~~~~v~~~~~~---~~~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~  394 (400)
T PTZ00125        325 VK-EIRG-KGLLNAIVFDHSD---GVNAWDLCLKLK-ENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLK  394 (400)
T ss_pred             eE-EEec-ccEEEEEEEccCc---chHHHHHHHHHH-HCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence            22 1133 5677777775310   113556777775 6799998863    57999997  4789999999999999999


Q ss_pred             HHhccC
Q 014769          414 RHTKKH  419 (419)
Q Consensus       414 ~~~~~~  419 (419)
                      ++...|
T Consensus       395 ~~~~~~  400 (400)
T PTZ00125        395 SFDSNK  400 (400)
T ss_pred             HHhcCC
Confidence            876543

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.94  E-value=3.2e-24  Score=202.72  Aligned_cols=227  Identities=18%  Similarity=0.175  Sum_probs=169.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC----cHHHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g  152 (419)
                      +..|+.+ ...+|++.++++.      +  .++.+++++++.++..++.+++.+||+|+++...|.+    +...+...|
T Consensus        64 Y~r~~~p-~~~~le~~lA~l~------g--~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G  134 (403)
T PRK07810         64 YSRYGNP-TVSMFEERLRLIE------G--AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWG  134 (403)
T ss_pred             eeCCCCc-hHHHHHHHHHHHh------C--CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence            4566664 4789999999997      2  3588889999999999999999999999998866643    345567789


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++.       .|++.+++++++++++|++.+|+||||.+.+   +++|.++|+++|+++|+|++|+...+..   
T Consensus       135 ~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~---  201 (403)
T PRK07810        135 VETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR---  201 (403)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence            99888763       3789999999888999999999999999998   9999999999999999999998644321   


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                       ++ ..+.   .+++.|++|.++..|.++ |+++++++       .+.+.++.. .......++..++.+...|+.    
T Consensus       202 -~~-~~ga---Divv~S~tK~l~g~g~~~gG~v~~~~~-------~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----  265 (403)
T PRK07810        202 -GL-PLGA---DVVVYSGTKHIDGQGRVLGGAILGDRE-------YIDGPVQKLMRHTGPALSAFNAWVLLKGLET----  265 (403)
T ss_pred             -hh-hcCC---cEEEccCCceecCCcCceeEEEEeChH-------HHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----
Confidence             11 2222   388899999988888887 77776541       122334433 233345566666665555543    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                       +..+.++..++...+.+.|+++|.+..+..|
T Consensus       266 -l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP  296 (403)
T PRK07810        266 -LALRVRHSNASALRIAEFLEGHPAVRWVRYP  296 (403)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence             6666777788888888899888776644433

>PLN02651 cysteine desulfurase

Probab=99.94  E-value=5.8e-24  Score=200.32  Aligned_cols=314  Identities=15%  Similarity=0.092  Sum_probs=211.2

Q ss_pred             CChHHHHHHHHHHHhCCCCCCC------CC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh---
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCY------AT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL---  127 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y------~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l---  127 (419)
                      +.++.+.+++.+.+.....+..      ..  ..-+.++|+.+++++      +.++++|++|+|++++++.++..+   
T Consensus        10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t~a~~~~l~~~~~~   83 (364)
T PLN02651         10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGATESNNLAIKGVMHF   83 (364)
T ss_pred             CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence            5678899999887643211111      00  111446677777776      567789999999999988877654   


Q ss_pred             -cCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769          128 -ARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ  203 (419)
Q Consensus       128 -~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  203 (419)
                       .++||+|++.+..|+.+...   +...|.+++.++++  .++.+|++.++++++++++++++++++|+||.+.|   ++
T Consensus        84 ~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l~  158 (364)
T PLN02651         84 YKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---VE  158 (364)
T ss_pred             ccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---HH
Confidence             46899999999888764332   34568888888874  34568999999999988999999999999999999   88


Q ss_pred             HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH
Q 014769          204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK  283 (419)
Q Consensus       204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~  283 (419)
                      +|.++|+++|+++++|.+++...    .+..+..++.   .+++.|.+|+++.  ..+|+++++++....-.+.....-.
T Consensus       159 ~I~~~~~~~g~~~~vD~a~~~g~----~~~~~~~~~~---D~~~~s~hK~~gp--~G~g~l~v~~~~~~~l~p~~~g~~~  229 (364)
T PLN02651        159 EIGELCREKKVLFHTDAAQAVGK----IPVDVDDLGV---DLMSISGHKIYGP--KGVGALYVRRRPRVRLEPLMSGGGQ  229 (364)
T ss_pred             HHHHHHHHcCCEEEEEcchhhCC----cccCcccCCC---CEEEechhhhCCC--CceEEEEEcCCCCCCCCccccCCCc
Confidence            99999999999999999998632    2223334443   3788899996332  3489998876321110111100000


Q ss_pred             hhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCC--CC--ceEEEEeecCccccc
Q 014769          284 DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNK--PE--GSMVTMVKLNPWLLE  358 (419)
Q Consensus       284 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~--p~--~g~~~~~~~~~~~~~  358 (419)
                      ......++++.....++.++++.... ..++..++.++..+++.+.|++ +++++++.+  +.  ....+.+.++.    
T Consensus       230 ~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~----  304 (364)
T PLN02651        230 ERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY----  304 (364)
T ss_pred             cCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC----
Confidence            00112456777777777777776433 3477778888999999999875 677774432  11  12244444542    


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALK  402 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~  402 (419)
                        .+..+++..| .+  |.+..|..+..                   .+.+|+|++  ++++||+
T Consensus       305 --~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        305 --VEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             --CCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence              2466777666 44  99988875422                   268999995  5778764

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.94  E-value=1.1e-23  Score=197.99  Aligned_cols=222  Identities=18%  Similarity=0.178  Sum_probs=166.9

Q ss_pred             CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEE
Q 014769           83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHF  158 (419)
Q Consensus        83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~  158 (419)
                      .+...+|++.++++.      +  .+..++++++++|+..++.+++++||+|+++.+.|.+...    .+...|.++..+
T Consensus        39 ~p~~~~le~~la~l~------g--~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v  110 (369)
T cd00614          39 NPTVDALEKKLAALE------G--GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV  110 (369)
T ss_pred             ChhHHHHHHHHHHHH------C--CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe
Confidence            345789999999987      2  3567888888999999999999999999999999987543    344678877776


Q ss_pred             eccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                      +.+       +++.+++++++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|++|+...+.    .++ .+
T Consensus       111 ~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~-~~  175 (369)
T cd00614         111 DPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPL-EL  175 (369)
T ss_pred             CCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Chh-hh
Confidence            542       588899999888999999999999999998   889999999999999999999864431    111 22


Q ss_pred             CCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                      +   ..+++.|++|.++.+| .+.|+++++++       ++++.++.... .....++...+++...++     .+..+.
T Consensus       176 g---~Divv~S~tK~l~g~~~~~gG~v~~~~~-------~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~-----tl~~r~  240 (369)
T cd00614         176 G---ADIVVHSATKYIGGHSDVIAGVVVGSGE-------ALIQRLRFLRLALGTILSPFDAWLLLRGLK-----TLPLRM  240 (369)
T ss_pred             C---CcEEEeccceeccCCCCceEEEEEeCcH-------HHHHHHHHHHHhhCCCCCHHHHHHHHcCCC-----CHHHHH
Confidence            2   3488999999987766 78999998642       46666665542 334455555555444443     245567


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          317 DTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ++..++...+.+.|+++|++..+..|
T Consensus       241 ~~~~~na~~la~~L~~~~~v~~V~~p  266 (369)
T cd00614         241 ERHSENALKVAEFLEKHPKVERVYYP  266 (369)
T ss_pred             HHHHHHHHHHHHHHHcCCCccEEECC
Confidence            77888899999999988766544344

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PLN00144 acetylornithine transaminase

Probab=99.94  E-value=8.3e-24  Score=199.24  Aligned_cols=342  Identities=12%  Similarity=0.066  Sum_probs=220.4

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||..|.-... .-.-+|.+.+++.+++.....  +.. ....+....+++.+.+..    ..+.|++++++++
T Consensus        12 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse   83 (382)
T PLN00144         12 VEGKEYLDMAAGIAVNA-LGHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE   83 (382)
T ss_pred             CCCCEEEECCcCHHhcc-CCCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence            46899999988842211 123579999999999875322  111 122344556666664422    2468999999999


Q ss_pred             HHHHHHHHhcC----C-----------CCeEEeeCCCCCCcHHHHhhcCCEEE----EEeccCCCCc--ccChHHHHHhh
Q 014769          119 AVEVILSVLAR----P-----------GANVLLPRPGWPYYEGIAQRKQVEVR----HFDLLPERNW--EVDLDAVEALA  177 (419)
Q Consensus       119 al~~~~~~l~~----~-----------gd~vlv~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~~--~~~~~~l~~~~  177 (419)
                      |++.+++....    +           ..+|+....+|++....+........    +.+..+.-.+  -.|++.+++.+
T Consensus        84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~  163 (382)
T PLN00144         84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI  163 (382)
T ss_pred             HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence            99999887532    0           24699999999987654443322110    0111110000  12688888887


Q ss_pred             cCCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcC
Q 014769          178 DKNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRW  254 (419)
Q Consensus       178 ~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~  254 (419)
                      ..+....+++.| +||.|.. .+.+++++|.++|++||+++|+||+|.++...+..+.. ...+.++     +.||||.+
T Consensus       164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l  238 (382)
T PLN00144        164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL  238 (382)
T ss_pred             CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc
Confidence            654445555666 7885553 46677999999999999999999999998776653221 2333332     55889995


Q ss_pred             CCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHH-HHHHHHHHHhhc
Q 014769          255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLR-ESAEICYDGVKE  332 (419)
Q Consensus       255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~l~~  332 (419)
                       .+|+|+||+++++        ++++.+... ...+++.+++.+.++.+.|+......+.++..++. ..++.+.+.+.+
T Consensus       239 -~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~  309 (382)
T PLN00144        239 -AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGG  309 (382)
T ss_pred             -cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhh
Confidence             6899999999975        566666533 23456788888888886665432222222222222 223344444555


Q ss_pred             CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769          333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKA  410 (419)
Q Consensus       333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~  410 (419)
                      .|.+..+  ...|+++|+.+..       ....+...+ .++||.+.|+..   .+.+|++++  .+++++++++++|.+
T Consensus       310 ~~~~~~v--rg~G~~~~l~l~~-------~~~~~~~~~-~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~  376 (382)
T PLN00144        310 NPHVKEV--RGVGLLVGIQLDV-------PAGPLVDAC-RDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILAD  376 (382)
T ss_pred             CCCceee--ecCceEEEEEecC-------ccHHHHHHH-HHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHH
Confidence            5443212  2479999999842       245666665 668999988732   489999994  589999999999999


Q ss_pred             HHHHH
Q 014769          411 FCQRH  415 (419)
Q Consensus       411 ~~~~~  415 (419)
                      ++.++
T Consensus       377 ~l~~~  381 (382)
T PLN00144        377 CLPAL  381 (382)
T ss_pred             HHHhc
Confidence            98764

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.94  E-value=1.2e-23  Score=199.08  Aligned_cols=221  Identities=19%  Similarity=0.200  Sum_probs=160.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g  152 (419)
                      +..|+. +...+|++.++++.      +.  +..++++++++++..++.+++++||+|+++.|.|....    ..+...|
T Consensus        59 y~r~~~-p~~~~le~~lA~l~------g~--~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G  129 (403)
T PRK07503         59 YSRISN-PTLALLEQRMASLE------GG--EAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG  129 (403)
T ss_pred             eeCCCC-chHHHHHHHHHHHh------CC--CcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCC
Confidence            344554 35789999999987      32  34577778889999999999999999999999986532    3345678


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++.       .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+.....    
T Consensus       130 ~~v~~vd~-------~d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~----  195 (403)
T PRK07503        130 VTVRHVDL-------TDPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ----  195 (403)
T ss_pred             EEEEEeCC-------CCHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            88887764       2688999999888999999999999999998   889999999999999999999864321    


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh--hc-cccCCchHHHHHHHHHHcccc
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC--LS-IYSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~~~~~~~a~~~~l~~~~  308 (419)
                      .++ .++.   .+++.|+||.++.+| .+.|+++.+.        ++.++++..  .. .....++..++.+...|    
T Consensus       196 ~~l-~~g~---Di~v~S~tK~l~g~gd~~gG~v~~~~--------~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L----  259 (403)
T PRK07503        196 RPL-ELGA---DLVVHSATKYLGGHGDITAGLVVGGK--------ALADRIRLEGLKDMTGAVMSPFDAFLLMRGL----  259 (403)
T ss_pred             Cch-hhCC---CEEEccccccccCCCceeEEEEEcCH--------HHHHHHHhhhHHhCcCCCCCHHHHHHHHcCc----
Confidence            122 2222   388999999988766 7788887543        566766633  22 23344555444433333    


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          309 EDFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                       +.+..+.++..++...+.+.|+++|.+.
T Consensus       260 -~tl~~r~~~~~~na~~~a~~L~~~p~v~  287 (403)
T PRK07503        260 -KTLALRMDRHCASAQAVAEWLARHPAVE  287 (403)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence             3355555566677888888888776554

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.94  E-value=8.5e-24  Score=199.18  Aligned_cols=223  Identities=21%  Similarity=0.282  Sum_probs=164.2

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g  152 (419)
                      +.+|+.+ -..++++.++++.      +  .+.+++++|+++++..++.+++++||+|+++.+.|.+.    ...+...|
T Consensus        48 y~r~~~p-~~~~le~~la~l~------g--~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g  118 (380)
T TIGR01325        48 YSRYANP-TVAAFEERIAALE------G--AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFG  118 (380)
T ss_pred             eecCCCc-hHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhC
Confidence            3456553 4689999999987      2  25788899999999999999999999999999988653    33566778


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      .++..++.+       |++.+++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|....+..   
T Consensus       119 ~~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~---  185 (380)
T TIGR01325       119 IEVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ---  185 (380)
T ss_pred             CEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence            888877642       688898888888999999999999999998   8999999999999999999998643221   


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                       ++ .++.   .+++.|++|.++.+|.++ |++++++        ++++.++.... .....++....+   ++..  .+
T Consensus       186 -pl-~~g~---Divv~S~sK~l~g~g~~~gG~vv~~~--------~~~~~l~~~~~~~g~~~~p~~a~~---~l~~--l~  247 (380)
T TIGR01325       186 -PL-KLGA---DVVVYSATKHIDGQGRVMGGVIAGSE--------ELMAEVAVYLRHTGPAMSPFNAWV---LLKG--LE  247 (380)
T ss_pred             -ch-hhCC---CEEEeeccceecCCCCeEEEEEEeCH--------HHHHHHHHHHHhhCCCCCHHHHHH---HHhc--cC
Confidence             12 2222   388889999988888886 6666543        46666665432 222333333322   3332  23


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCP  339 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  339 (419)
                      .+..+.++..+++..+.+.|+++|++..|
T Consensus       248 tl~~r~~~~~~~a~~la~~L~~~p~v~~V  276 (380)
T TIGR01325       248 TLSLRMQKQFDSALAIAEWLQAQPQVQAV  276 (380)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence            45566777888888899999888765533

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.94  E-value=1e-23  Score=198.92  Aligned_cols=226  Identities=16%  Similarity=0.163  Sum_probs=162.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g  152 (419)
                      +.+|+.+ ...+|++.+|++.      +  .+..++++++++++..++.+++.+||.|+++.|.|...    ...+...|
T Consensus        53 y~r~~~p-~~~~le~~lA~l~------g--~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G  123 (391)
T TIGR01328        53 YSRLGNP-TVSNLEGRIAFLE------G--TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFG  123 (391)
T ss_pred             eeCCCCc-hHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCC
Confidence            4455554 4678999999998      2  24578888889999999999999999999999988643    33445578


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +.+..++++       |++.+++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|......    
T Consensus       124 ~~~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~----  189 (391)
T TIGR01328       124 IQVDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT----  189 (391)
T ss_pred             eEEEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC----
Confidence            888777642       688999999888999999999999999998   888999999999999999999864321    


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhh--cc-ccCCchHHHHHHHHHHcccc
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCL--SI-YSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~--~~-~~~~~~~~~~a~~~~l~~~~  308 (419)
                      .++ ..+.   .+++.|+||.++.+|.++ |++++++        ++++.++...  .. ....++...+.+...|+   
T Consensus       190 ~~~-~~g~---Divv~S~sK~lgg~g~~~gG~v~~~~--------~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~---  254 (391)
T TIGR01328       190 NPV-ALGV---DVVVHSATKYIGGHGDVVAGLICGKA--------ELLQQIRMVGIKDMTGSVISPFDAWLILRGLK---  254 (391)
T ss_pred             Cch-hcCC---CEEEccccccccCCCCceEEEEEcCH--------HHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---
Confidence            112 1222   288899999999888775 6665533        5666666432  11 22334443333333332   


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                        .+..+.++.+++...+.+.|+++|++..+..|
T Consensus       255 --tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp  286 (391)
T TIGR01328       255 --TLNIRMKRHSENAMKVAEYLKSHPAVEKVYYP  286 (391)
T ss_pred             --cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence              24555677788888888988887765534333

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.93  E-value=1.1e-24  Score=204.59  Aligned_cols=316  Identities=14%  Similarity=0.113  Sum_probs=212.0

Q ss_pred             CChHHHHHHHHHHHhCCC--CCCCCCC------CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-
Q 014769           59 RTAVEAEDAIVDAVRSGK--FNCYATN------SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-  129 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~--~~~Y~~~------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-  129 (419)
                      ++++.+++++.+.+....  ...+...      .-+.++|+.+++++      +.++++|++|+|++++++.++.++.. 
T Consensus         9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~   82 (353)
T TIGR03235         9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLARA   82 (353)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence            577889999988774321  1111111      11357788888887      56788999999999999999988753 


Q ss_pred             ---CC-CeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769          130 ---PG-ANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL  202 (419)
Q Consensus       130 ---~g-d~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  202 (419)
                         +| +.|++....|+.+.   ..++..|.+++.++.+.  ++.+|++.+++.++++++++++++|+||||.++|   +
T Consensus        83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~  157 (353)
T TIGR03235        83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I  157 (353)
T ss_pred             cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence               55 77888877776543   33455688998888753  4568999999999888899999999999999999   8


Q ss_pred             HHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc--hhhHHH
Q 014769          203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ--KSGIID  280 (419)
Q Consensus       203 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~--~~~~~~  280 (419)
                      ++|.++|+++|+++++|++++...    ....+...+   ..+++.|.+|.++.+|  +|++++++......  .+....
T Consensus       158 ~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~~~---~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~  228 (353)
T TIGR03235       158 REIAEVLEAHEAFFHVDAAQVVGK----ITVDLSADR---IDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFG  228 (353)
T ss_pred             HHHHHHHHHcCCEEEEEchhhcCC----ccccccccC---CCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeC
Confidence            999999999999999999988632    222222222   2377778999865555  89998876311000  000000


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce--EEEEeecCccccc
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS--MVTMVKLNPWLLE  358 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g--~~~~~~~~~~~~~  358 (419)
                      .-.......++++.....++.++++.. ....++..++++++.+.+++.|++ +|++.+..+...  ..+.+.++.    
T Consensus       229 ~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~----  302 (353)
T TIGR03235       229 GGQERGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDG----  302 (353)
T ss_pred             CCCcCccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCC----
Confidence            000000113455666666676676653 245677888999999999999988 477744233221  123333332    


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCCC----CeEEEEeecCHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGLK----NWLRIAFCAEPSALKDG  404 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~----~~~Ris~~~~~~~l~~~  404 (419)
                        .+..++...| ++ +|.+.+|..|...    .++|.+++.+++++..+
T Consensus       303 --~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~  348 (353)
T TIGR03235       303 --VNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA  348 (353)
T ss_pred             --cCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence              2455665555 65 8999999988653    36888888777665544

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.93  E-value=6.4e-23  Score=198.53  Aligned_cols=340  Identities=13%  Similarity=0.069  Sum_probs=226.5

Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC---CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH
Q 014769           47 LGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY---ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI  123 (419)
Q Consensus        47 l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~  123 (419)
                      .+.|.+    .+..+|.+.+++.+.......+.|   ...+|..+++..+.+++.+.+|.+  ...+..++|+++.+..+
T Consensus        73 ~g~G~~----~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l  146 (481)
T PRK04366         73 YPLGSC----TMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGL  146 (481)
T ss_pred             ecCccc----CCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHH
Confidence            455553    355678888887765222345577   356789999999999999888753  34455556666555533


Q ss_pred             --HH-HhcCCCC----eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769          124 --LS-VLARPGA----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV  196 (419)
Q Consensus       124 --~~-~l~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  196 (419)
                        ++ .+.++||    +|+++.|+|+.+...+...|++++.++++  .++.+|++.|++++++++++|++++|+ |||..
T Consensus       147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~  223 (481)
T PRK04366        147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF  223 (481)
T ss_pred             HHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc
Confidence              22 3456666    99999999999999999999999999874  346799999999998889999999988 99965


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCCCc
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPNGI  272 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~  272 (419)
                        .+++++|+++|+++|+++++|.++.....+ .  .+...++.+   +++++.+|+++.|    |..+|++++++.   
T Consensus       224 --~~dl~eI~~~a~~~gal~iVD~a~~~~~~g-~--~~~~~~GaD---~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~---  292 (481)
T PRK04366        224 --ERNILEIAEIVHEAGGLLYYDGANLNAILG-K--ARPGDMGFD---VVHLNLHKTFSTPHGGGGPGSGPVGVKEE---  292 (481)
T ss_pred             --chHHHHHHHHHHHcCCEEEEEecChhhhcc-c--CCccccCCC---EEEEechhhcCCCCCCCCCCeeeeeehhh---
Confidence              346999999999999999999998642221 1  122333433   8888999997754    466889888652   


Q ss_pred             cchhhHHHHHHhh--------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          273 FQKSGIIDSIKDC--------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       273 ~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                           +.+.+...                    +...++.+.....++..++.....+.+++..++...+.+++.+.|.+
T Consensus       293 -----~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~  367 (481)
T PRK04366        293 -----LAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD  367 (481)
T ss_pred             -----hHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence                 22222100                    00111223344445555555544677888888888889999999987


Q ss_pred             CCCCCCCCCCCce-EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEEee--cCHHHHHHHHHHH
Q 014769          333 IPCISCPNKPEGS-MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIAFC--AEPSALKDGLGRM  408 (419)
Q Consensus       333 ~~~~~~~~~p~~g-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~--~~~~~l~~~l~~l  408 (419)
                      +..+. .  +... .-+.+.++.....+ .+..++.++| .++||.+....... ..+.+|++++  .++++|+.+++.|
T Consensus       368 ~~~~~-~--~~~~~~~~~~~~~~~~~~g-~~~~~v~~~L-~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l  442 (481)
T PRK04366        368 IYDLP-Y--DRPCMHEFVLSGKKLKETG-VRTLDIAKRL-LDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAM  442 (481)
T ss_pred             hCccc-C--CCCeeEEEEEECccccccC-CCHHHHHHHH-HHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHH
Confidence            62332 1  2111 11223322111111 1466777777 56799864222212 2578999994  6899999999999


Q ss_pred             HHHHHHHh
Q 014769          409 KAFCQRHT  416 (419)
Q Consensus       409 ~~~~~~~~  416 (419)
                      +++.++..
T Consensus       443 ~~i~~~~~  450 (481)
T PRK04366        443 KQIAEEAK  450 (481)
T ss_pred             HHHHHHHH
Confidence            99987654

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=2.1e-23  Score=196.70  Aligned_cols=221  Identities=21%  Similarity=0.179  Sum_probs=158.2

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~  159 (419)
                      ....+|+++++++..      .  +..++++++++|+..++.+++++||+|+++.|+|.+....+    ...|+++..++
T Consensus        61 p~~~~Le~~lA~~~g------~--~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d  132 (388)
T PRK07811         61 PTRTALEEQLAALEG------G--AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVD  132 (388)
T ss_pred             ccHHHHHHHHHHHhC------C--CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeC
Confidence            568899999999983      2  23355566789999999999999999999999998543332    23466666654


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      .       .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+.....    .++. .+
T Consensus       133 ~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~-~g  197 (388)
T PRK07811        133 L-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ----QPLA-LG  197 (388)
T ss_pred             C-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC----Cchh-hC
Confidence            3       4789999999888999999999999999877   899999999999999999999864321    1221 22


Q ss_pred             CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                      .   .+++.|++|.++.+| .+.||++++++       ++.+.++..... ....++...+.+...|+     .+..+.+
T Consensus       198 a---Divv~S~sK~l~g~~~~~gG~vv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~-----tl~~R~~  262 (388)
T PRK07811        198 A---DVVVHSTTKYIGGHSDVVGGALVTNDE-------ELDEAFAFLQNGAGAVPGPFDAYLTLRGLK-----TLAVRMD  262 (388)
T ss_pred             C---cEEEecCceeecCCCCcEEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhccC-----cHHHHHH
Confidence            2   388999999987755 57899987652       455555544432 22333333333333333     2556666


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      +..++...+.+.|+++|++..+..|
T Consensus       263 ~~~~na~~la~~L~~~p~v~~V~yP  287 (388)
T PRK07811        263 RHSENAEAVAEFLAGHPEVSTVLYP  287 (388)
T ss_pred             HHHHHHHHHHHHHHhCCCeeEEECC
Confidence            7778888899999887765433333

>PRK07505 hypothetical protein; Provisional

Probab=99.93  E-value=3.6e-23  Score=197.37  Aligned_cols=333  Identities=16%  Similarity=0.156  Sum_probs=204.9

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-CCCCCC-----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-FNCYAT-----NSGIPPARRAIADYLSRDLPYKLSADDVYV  112 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~  112 (419)
                      .+|..++||+..++   ..+..+|++.+++.+++.... ...+..     .....++++.+++++      +.   +.++
T Consensus        43 ~~g~~~ld~~s~~~---lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~------~~---~~~~  110 (402)
T PRK07505         43 ADGHTFVNFVSCSY---LGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF------GA---SVLT  110 (402)
T ss_pred             cCCceEEEeecCCc---cCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh------CC---CEEE
Confidence            35888999977542   223568999999999986421 111111     122345666666655      22   4555


Q ss_pred             cccHHHHHHHHHHHhc----CCC-CeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          113 TLGCKQAVEVILSVLA----RPG-ANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       113 t~g~~~al~~~~~~l~----~~g-d~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      +++++++...++..+.    .+| ..|++.+..|++..   ......+.+++.++.       .|++.++++++++++++
T Consensus       111 ~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~  183 (402)
T PRK07505        111 FTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVA  183 (402)
T ss_pred             ECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEE
Confidence            5566678777775543    223 23666665655421   111223445555543       37889998887778899


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC-CCccccC--CCCcEEEEecCCCcCCCCCcee
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFG--SIVPVITLGSISKRWLVPGWRF  261 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~  261 (419)
                      ++++|+||||.+.+   +++|.++|+++++++|+||+|+...++.... .....++  ..+++++++|+||.++++|   
T Consensus       184 vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---  257 (402)
T PRK07505        184 YVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---  257 (402)
T ss_pred             EEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---
Confidence            99999999999999   7888999999999999999996544432211 1111222  2346899999999988776   


Q ss_pred             EEEEeeCCCCccchhhHHHHHHhhhc-c--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014769          262 GWLVTNDPNGIFQKSGIIDSIKDCLS-I--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISC  338 (419)
Q Consensus       262 G~~~~~~~~~~~~~~~~~~~l~~~~~-~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  338 (419)
                      ||+++.++       ++++.++.... .  +.++++++..++.+.++....+++.+..++++++.+.+...+...     
T Consensus       258 g~~~~~~~-------~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----  325 (402)
T PRK07505        258 GVIMLGDA-------EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----  325 (402)
T ss_pred             eEEEeCCH-------HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----
Confidence            88765432       56777765432 1  223455666666666653223444455555555555443322111     


Q ss_pred             CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769          339 PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       339 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~  413 (419)
                      . ...+.++.++.++..     .+..++...|+ ++||.+.++..+..   .+++|+++.  .++++++++++.|++++.
T Consensus       326 ~-~g~~~~i~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~  398 (402)
T PRK07505        326 Q-SGSFLPIRLIYIGDE-----DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD  398 (402)
T ss_pred             C-CCCCCCEEEEEeCCH-----HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence            1 111122223333210     12456777774 67999998754433   268999996  689999999999999886


Q ss_pred             HH
Q 014769          414 RH  415 (419)
Q Consensus       414 ~~  415 (419)
                      +-
T Consensus       399 ~~  400 (402)
T PRK07505        399 EG  400 (402)
T ss_pred             hh
Confidence            53

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.93  E-value=1.7e-23  Score=195.98  Aligned_cols=282  Identities=16%  Similarity=0.200  Sum_probs=188.8

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g  152 (419)
                      +.+|++ ....+|+++++++.         .++.++++++++++..++.+++++||+|++++|+|+.+...+    ...|
T Consensus        45 y~ry~~-p~~~~Le~~lA~l~---------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G  114 (366)
T PRK07582         45 YGRASN-PTWRALEAALGELE---------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG  114 (366)
T ss_pred             eECCCC-ccHHHHHHHHHHHc---------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence            445665 57899999999986         235666667778999999999999999999999998876543    4468


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      ++++.++....      .+    .+.+++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|....  +.  
T Consensus       115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~--~~--  177 (366)
T PRK07582        115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL--GQ--  177 (366)
T ss_pred             EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc--cc--
Confidence            88888775321      11    22347889999999999998887   9999999999999999999996421  11  


Q ss_pred             CCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .++ .++.+   ++++|+||.++. +|+++||++++++       ++++.++..... ...+++...+.+...++.    
T Consensus       178 ~p~-~~g~D---ivv~S~sK~l~G~~g~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t----  242 (366)
T PRK07582        178 RPL-ELGAD---LVVASDTKALTGHSDLLLGYVAGRDP-------ELMAAVERWRLLAGAIPGPFEAWLAHRSLGT----  242 (366)
T ss_pred             Cch-hcCCc---EEEecccccccCCCCeeEEEEEcCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----
Confidence            122 22322   788999998754 5799999997542       466767665433 334555555555444443    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC------C-----------CceEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNK------P-----------EGSMVTMVKLNPWLLEDINDDIEFALKLAKE  373 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~------p-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~  373 (419)
                       +..+.++..++...+.+.|+++|.+..+..      |           .+| .+.+.++        +..+ +.+++..
T Consensus       243 -l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg-~~s~~~~--------~~~~-~~~~~~~  311 (366)
T PRK07582        243 -LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGG-LVSFELA--------DAAA-AERFVAA  311 (366)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcc-eEEEEeC--------CHHH-HHHHHHh
Confidence             455556777888889999988776553332      2           234 4445564        2222 3444455


Q ss_pred             cCeEeecCCCCCC----------------CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          374 ESVIVTPGIYVGL----------------KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       374 ~gv~v~~g~~~~~----------------~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      .++.. .+..+|.                ++.||+|++..  +.+++++.|++++.+
T Consensus       312 l~~~~-~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE--~~~dli~dl~~al~~  365 (366)
T PRK07582        312 SRLVV-AATSFGGVHTSADRRARWGDAVPEGFVRLSCGIE--DTDDLVADLERALDA  365 (366)
T ss_pred             CCcce-ecccCCCccchhhhHHHcCCCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence            56543 2222221                35799999863  345556666666543

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.93  E-value=1e-23  Score=179.78  Aligned_cols=377  Identities=16%  Similarity=0.144  Sum_probs=263.9

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCCh-HHHHHHHHHHHhCC-CCCCCCCCCCCHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTA-VEAEDAIVDAVRSG-KFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~-~~v~~a~~~~~~~~-~~~~Y~~~~g~~~lr~~ia   94 (419)
                      ...+++..+..+.++..    +...+..+||++|.-..+.+.|+. |.++++-.+...+. ..+.|.|..|.+.++++.+
T Consensus         9 I~~a~p~~vf~~~~~y~----~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~   84 (410)
T KOG1412|consen    9 IPVAPPIEVFKLNASYG----EDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAAT   84 (410)
T ss_pred             CccCChHHHHhhHHHhc----ccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhH
Confidence            34556666666655433    345788899999944333334433 44433332222222 2358999999999999999


Q ss_pred             HHHHhhCCCCCCCCcE--EEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC-EEEEEeccCCCCcccC
Q 014769           95 DYLSRDLPYKLSADDV--YVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV-EVRHFDLLPERNWEVD  169 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i--~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~  169 (419)
                      +.+.......+..+++  +-+-|+|.|+.+....+..  ...+|.+.+|+|..+..+++..|+ .+..++.-..++-.+|
T Consensus        85 el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d  164 (410)
T KOG1412|consen   85 ELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVD  164 (410)
T ss_pred             HHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceec
Confidence            9986544445566665  5678889999998887743  457799999999999999999994 4566666555566789


Q ss_pred             hHHHHHhhcCCc--cEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC--CCcccc-CCCCc
Q 014769          170 LDAVEALADKNT--AAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY--TPMGLF-GSIVP  243 (419)
Q Consensus       170 ~~~l~~~~~~~~--~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~-~~~~~  243 (419)
                      ++.+...+...+  ..+++..+ +||||.-.+.++|.+|+++.++.+.+.+.|-+|++|..++...  ..+.-+ .....
T Consensus       165 ~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e  244 (410)
T KOG1412|consen  165 LEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE  244 (410)
T ss_pred             HHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe
Confidence            999888876543  23334433 9999999999999999999999999999999999987654321  111111 12235


Q ss_pred             EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc--hHH---HHHHHH
Q 014769          244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK--EDF---FCKLID  317 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~--~~~---~~~~~~  317 (419)
                      ++++.||+|.+|+.+-|+|-+.+--..... .+.+...+... +...+.|+......+.++|....  ++|   ++.+..
T Consensus       245 ~fv~QSFaKNfGlYneRvGnltvv~~n~a~-i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~Mss  323 (410)
T KOG1412|consen  245 LFVCQSFAKNFGLYNERVGNLTVVVNNPAV-IAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSS  323 (410)
T ss_pred             EEEEhhhhhhcccccccccceEEEecChhH-HHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            799999999999999999986542211100 01233333333 23456777778888999998743  233   455667


Q ss_pred             HHHHHHHHHHHHhhcC--CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-
Q 014769          318 TLRESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-  394 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~--~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-  394 (419)
                      |+++.|..|++.|..+  ||-.-....+.|||.+..+.         . ..++.|.+++.|++.+..        ||++ 
T Consensus       324 RI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLt---------p-~qV~~li~~h~vyLl~~G--------RInis  385 (410)
T KOG1412|consen  324 RIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLT---------P-AQVDHLIENHKVYLLSDG--------RINIS  385 (410)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCC---------H-HHHHHHHHhceEEEecCC--------cEeee
Confidence            8888888888888775  55332446788999987664         2 345788899999988755        9999 


Q ss_pred             ecCHHHHHHHHHHHHHHHHHHh
Q 014769          395 CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       395 ~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +.+...++...+.|.+..+.+.
T Consensus       386 GLN~~NveyVAkAIde~Vr~~~  407 (410)
T KOG1412|consen  386 GLNMKNVEYVAKAIDETVRAIK  407 (410)
T ss_pred             ccccccHHHHHHHHHHHHHhhc
Confidence            6788899999999998887654

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.93  E-value=4.6e-23  Score=195.78  Aligned_cols=344  Identities=16%  Similarity=0.130  Sum_probs=217.3

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      ..+|+.++||..|.....-.. .+|.+.+++.++++....  ..|.. .-..+|.+.++++.        ..+.++++++
T Consensus        31 d~dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~la~~L~~~~--------~~~~~~f~~S  100 (397)
T TIGR03246        31 DQQGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYTN-EPVLRLAKKLVDAT--------FADKVFFCNS  100 (397)
T ss_pred             eCCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccCC-HHHHHHHHHHHhhC--------CCCEEEEeCC
Confidence            346889999988743222222 589999999999875321  11221 11234444444432        2369999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CCEEEE---EeccCCC--CcccChHHHHHhhcCCc
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QVEVRH---FDLLPER--NWEVDLDAVEALADKNT  181 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~~~~~---~~~~~~~--~~~~~~~~l~~~~~~~~  181 (419)
                      +++|++.+++....       +| +.|+..+-+|++........ +.....   -+..+.-  -.-.|++.+++.+.+++
T Consensus       101 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  180 (397)
T TIGR03246       101 GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKT  180 (397)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCe
Confidence            99999999998631       23 67888888888764333222 211000   0000000  00127889998887666


Q ss_pred             cEEEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          182 AAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       182 ~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      .+|++..++++.|.. .+.+++++|.++|++||+++|+||+|.++...|..+ ....++.... +  -++||.++ .|++
T Consensus       181 aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD-i--~t~~K~lg-gG~p  255 (397)
T TIGR03246       181 CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD-I--LTSAKALG-GGFP  255 (397)
T ss_pred             EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC-E--EEeehhhh-CCcc
Confidence            666655445566654 489999999999999999999999998876655432 2222222222 2  27899975 7999


Q ss_pred             eEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-CCCC
Q 014769          261 FGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP-CISC  338 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~  338 (419)
                      +|++++++        ++++.+.... ..+++.+++.+.++.+.|+...   -++..++++++.+++.+.|+++. ...+
T Consensus       256 igav~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~  324 (397)
T TIGR03246       256 IGAMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNV  324 (397)
T ss_pred             eeEEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999975        5777775432 2345678888888878776522   23456777778888888777641 1111


Q ss_pred             CC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          339 PN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       339 ~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +. ....|.++.+.+....   ......++..+ .++||.+.+..    .+++|+++  ..++++|++++++|.+++.++
T Consensus       325 ~~~vrg~G~~~~i~~~~~~---~~~~~~~~~~l-~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~  396 (397)
T TIGR03246       325 FSEIRGKGLLIGAVLTEAY---QGKAKQFVNAA-AEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERAIEQV  396 (397)
T ss_pred             eEeeecCceEEEEEEcCch---hhHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            11 1223444455553210   01245666666 55799987632    47899976  578999999999999998764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.93  E-value=3.8e-23  Score=193.26  Aligned_cols=244  Identities=14%  Similarity=0.146  Sum_probs=171.0

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL  135 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl  135 (419)
                      ++.++.+.++...... .. ..|+.  ..+...|+++||++.        ..+++++++|+++|+..++.+++++||+|+
T Consensus        35 ~~~~~~~~~~~~~~~~-~~-~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv  104 (394)
T PRK09028         35 FDTVAEMRHAAKNRAN-GE-MFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL  104 (394)
T ss_pred             cCCHHHHHHHhccCcc-CC-ceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            4555555554432211 11 24554  235579999999885        224789999999999999999999999999


Q ss_pred             eeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          136 LPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       136 v~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      +++|.|.+....    +...|+++..++.       .+.+.+++++++++++|++.+|+||||.+.+   +++|+++|++
T Consensus       105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~-------~~~e~l~~~l~~~TklV~lespsNPtg~v~d---l~~I~~la~~  174 (394)
T PRK09028        105 MVDSCYEPTRDLCDKILKGFGIETTYYDP-------MIGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIAHE  174 (394)
T ss_pred             EECCCcHHHHHHHHHhhhhcceEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHHH
Confidence            999999776543    3456777766542       1457788888888999999999999988866   9999999999


Q ss_pred             CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cc
Q 014769          212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IY  289 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~  289 (419)
                      +|+++|+|++|+...    ...++ .++.   .+++.|.+|+++.+| .-.|+++.++        ++.+.++.... ..
T Consensus       175 ~g~~lvvD~t~a~p~----~~~Pl-~~Ga---Divv~S~tK~l~Gh~d~~~G~~~~~~--------~~~~~l~~~~~~~G  238 (394)
T PRK09028        175 HDIVVMLDNTWASPI----NSRPF-EMGV---DISIQAATKYIVGHSDVMLGTATANE--------KHWDQLREHSYLMG  238 (394)
T ss_pred             cCCEEEEECCccccc----cCCcc-ccCc---eEEEEeCCeEecCCCCEEEEEEECCH--------HHHHHHHHHHHhcC
Confidence            999999999998532    11122 3343   399999999986664 6677665432        34455554432 23


Q ss_pred             cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          290 SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       290 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ...++...+.+..-|+.     +.-+.++..++...+.+.|+++|.+..|..|
T Consensus       239 ~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p~v~~V~yP  286 (394)
T PRK09028        239 QCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRPEVDHVRHP  286 (394)
T ss_pred             CCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            44555555544443333     6666777888888999999988766544444

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.93  E-value=1e-22  Score=192.51  Aligned_cols=311  Identities=22%  Similarity=0.245  Sum_probs=223.6

Q ss_pred             CChHHHHHHHHHHHhCCCCC----CCCC----CCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHh--
Q 014769           59 RTAVEAEDAIVDAVRSGKFN----CYAT----NSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVL--  127 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~----~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l--  127 (419)
                      +.++.+.+++.+.+.....+    .+..    ..-+.+.|+.+++++      +.++ ++|++++|++++++.++.++  
T Consensus        10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~~t~a~~~~~~~l~~   83 (371)
T PF00266_consen   10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSNGTEALNAVASSLLN   83 (371)
T ss_dssp             B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccccchhhhhhhhcccc
Confidence            56788999998886532111    1111    122357888888888      5677 89999999999999999999  


Q ss_pred             -cCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769          128 -ARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL  202 (419)
Q Consensus       128 -~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  202 (419)
                       .++||+|++.+-.|++..    ...+..|.++..++.+.+  ..+|++.+++.++++++++++++.+|.||..+|   +
T Consensus        84 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i  158 (371)
T PF00266_consen   84 PLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISHVENSTGVRNP---I  158 (371)
T ss_dssp             HGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---H
T ss_pred             ccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeecccccccEEee---e
Confidence             789999999999998654    444577999998887543  368899999999999999999999999999999   9


Q ss_pred             HHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769          203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI  282 (419)
Q Consensus       203 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l  282 (419)
                      ++|.++|+++|+++++|.+++..    .....+..++.+   ++++|.+|.++.+|  +|++++++        +..+.+
T Consensus       159 ~~I~~~~~~~~~~~~vD~~~~~g----~~~id~~~~~~D---~~~~s~~Kl~gp~G--~g~l~v~~--------~~~~~~  221 (371)
T PF00266_consen  159 EEIAKLAHEYGALLVVDAAQSAG----CVPIDLDELGAD---FLVFSSHKLGGPPG--LGFLYVRP--------EAIERL  221 (371)
T ss_dssp             HHHHHHHHHTTSEEEEE-TTTTT----TSS--TTTTTES---EEEEESTSTTSSST--EEEEEEEH--------HHHHHH
T ss_pred             ceehhhhhccCCceeEechhccc----cccccccccccc---eeeecccccCCCCc--hhhheehh--------hhhhcc
Confidence            99999999999999999999873    233334444433   78889999544445  79999876        344444


Q ss_pred             Hhhh---------------------cc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014769          283 KDCL---------------------SI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN  340 (419)
Q Consensus       283 ~~~~---------------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  340 (419)
                      +...                     .+ .++++.+...++..+++.......++..++..++.+++.+.|.+++++....
T Consensus       222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~  301 (371)
T PF00266_consen  222 RPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLG  301 (371)
T ss_dssp             HTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred             ccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEee
Confidence            3110                     01 2356777777777777765456778888999999999999999987766322


Q ss_pred             ---CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCeEEEEee--cCHHHHHHH
Q 014769          341 ---KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNWLRIAFC--AEPSALKDG  404 (419)
Q Consensus       341 ---~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~~Ris~~--~~~~~l~~~  404 (419)
                         .+..+..+.+.++.      .+..++...| ++.||.+..|..+.        ..+.+|+|++  .+++||+++
T Consensus       302 ~~~~~~~~~i~~~~~~~------~~~~~~~~~L-~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  302 PDDEPRRPSIVSFNLPG------SDADDVVKYL-EERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             SSCGGBGTTEEEEEETT------SSHHHHHHHH-HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             ecccccccceEEEeecC------CCHHHHHHHH-hhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence               12223344455543      2456666665 55699999987665        3589999995  588999874

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.93  E-value=3.1e-22  Score=188.12  Aligned_cols=348  Identities=12%  Similarity=0.076  Sum_probs=230.3

Q ss_pred             hCCchhHHHHHHHHHHhhhcC------------CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC--CCC
Q 014769           19 AAPAVTVKTSLASIIDSVNKN------------DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA--TNS   84 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~------------~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--~~~   84 (419)
                      +-...+....+.++...-++.            +..++++|+..+   +..+..+|+++++..++++......-+  -..
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~  143 (476)
T PLN02955         67 SVSIPTFQKWLHDIPSNGEEIFSGDALAEERKGRFKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALIC  143 (476)
T ss_pred             EechhhHHHHHHHHhcccccccCCCCccccccCCCceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccc
Confidence            344455555555555433321            134789999998   456788999999999988653211111  123


Q ss_pred             CC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh--------------cCCCCeEEeeCCCCCCcHH
Q 014769           85 GI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL--------------ARPGANVLLPRPGWPYYEG  146 (419)
Q Consensus        85 g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l--------------~~~gd~vlv~~p~~~~~~~  146 (419)
                      |.    .+|++.+|+|+        ..+..++.+++..|...++.++              ..++|.|+.....|.+...
T Consensus       144 G~~~~h~~LE~~LA~f~--------g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d  215 (476)
T PLN02955        144 GYTTYHRLLESSLADLK--------KKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID  215 (476)
T ss_pred             cChHHHHHHHHHHHHHH--------CCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH
Confidence            44    67999999998        3467888888898888888877              2456788888888888887


Q ss_pred             HHhhc----CCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          147 IAQRK----QVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       147 ~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      .++..    +.++..+++       -|++.|++.++.  ..+.++++.+ .++.|.+.|   +++|.++|+++|+++|+|
T Consensus       216 G~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVD  285 (476)
T PLN02955        216 GVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVID  285 (476)
T ss_pred             HHHhccccCCceEEEeCC-------CCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEc
Confidence            77766    456665553       277888777643  2234455554 789999999   899999999999999999


Q ss_pred             ccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCch-H
Q 014769          220 EVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPT-F  295 (419)
Q Consensus       220 e~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~-~  295 (419)
                      |+|+.+.++..+......++. .+..|+++||||++|+.|   |++++++        ++++.++....  .+++..+ +
T Consensus       286 EAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~gs~--------~~~~~l~~~~~~~ifStalpp~  354 (476)
T PLN02955        286 DAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIACSK--------KWKQLIQSRGRSFIFSTAIPVP  354 (476)
T ss_pred             ccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ceeecHH--------HHHHHHHHhCCCCeecccccHH
Confidence            999988776533222222221 245689999999987777   9999876        57777775532  2233333 3


Q ss_pred             HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcC
Q 014769          296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES  375 (419)
Q Consensus       296 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  375 (419)
                      ...++.+.++....  -...+++++++.+++++.   . |+. .  +  +.++.+.+...     ....++..+| .++|
T Consensus       355 ~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~---~-G~~-~--~--sPI~pI~ig~~-----~~a~~~~~~L-~~~G  417 (476)
T PLN02955        355 MAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL---S-GVD-I--S--SPIISLVVGNQ-----EKALKASRYL-LKSG  417 (476)
T ss_pred             HHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh---c-CCC-C--C--CCEEEEEeCCH-----HHHHHHHHHH-HHCC
Confidence            33344444433211  123567777887777774   2 554 2  1  33333434321     1234556666 5679


Q ss_pred             eEeecCCCCCCC---CeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          376 VIVTPGIYVGLK---NWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       376 v~v~~g~~~~~~---~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      |.+.+..++..+   ..+||++  ..++++|+.+++.|.++....
T Consensus       418 i~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~  462 (476)
T PLN02955        418 FHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD  462 (476)
T ss_pred             CEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence            999988777653   4699999  368999999999999887543

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=2.9e-23  Score=195.25  Aligned_cols=219  Identities=16%  Similarity=0.154  Sum_probs=158.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH---hhcCCEE
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA---QRKQVEV  155 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~---~~~g~~~  155 (419)
                      +|+. +...+|++.+++++      +  .+++++++|+++|+..++.+++++||.|+++.|.|.+....+   ...|+++
T Consensus        49 r~~n-p~~~~lE~~lA~l~------g--~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v  119 (385)
T PRK08574         49 REEN-PTLRPLEEALAKLE------G--GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKV  119 (385)
T ss_pred             CCCC-ccHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEE
Confidence            3444 46789999999998      2  357888899999999999999999999999999999876555   3446666


Q ss_pred             EEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769          156 RHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP  234 (419)
Q Consensus       156 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  234 (419)
                      ..+.        ++.+.+++++++ ++++|++.+|+||||.+++   +++|+++|+++|+++|+|++|+....    ..+
T Consensus       120 ~~~~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~  184 (385)
T PRK08574        120 VLAY--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRP  184 (385)
T ss_pred             EEEC--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CCh
Confidence            5542        367889999987 8999999999999999999   88999999999999999999965321    112


Q ss_pred             ccccCCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHH
Q 014769          235 MGLFGSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFF  312 (419)
Q Consensus       235 ~~~~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~  312 (419)
                      + ..+   ..+++.|++|.++.+|-. .|++++.+.       ++.+.++.... +....++...+.+...++     .+
T Consensus       185 l-~~G---aDivv~S~sK~l~g~~d~~gG~vi~~~~-------~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~-----tL  248 (385)
T PRK08574        185 L-RHG---ADFVVHSLTKYIAGHNDVVGGVAVAWSG-------EFLEELWEWRRRLGTIMQPFEAYLVLRGLK-----TL  248 (385)
T ss_pred             h-hhC---CcEEEeeCceeecCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcccC-----cH
Confidence            2 222   248899999998777655 466666442       46666665543 233344443333333332     35


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      ..+.++..++...+.+.|+++|.+.
T Consensus       249 ~~R~~~~~~na~~la~~L~~~p~v~  273 (385)
T PRK08574        249 EVRFERQCRNAMAIAEFLSEHPKVA  273 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCcC
Confidence            5566666778888888888776554

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.93  E-value=9.3e-23  Score=194.86  Aligned_cols=353  Identities=16%  Similarity=0.086  Sum_probs=214.2

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|.-... .-.-+|.+.+++.+++.......+..  ...+.+..+++.+.+..+ +...+.++++++++
T Consensus        29 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGs  104 (420)
T TIGR00700        29 DVDGNRLIDFASGIAVLN-IGHSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGA  104 (420)
T ss_pred             eCCCCEEEECccCHHhcc-CCCCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcH
Confidence            346899999988843321 12357899999999987643322221  112334445555543221 11236899999999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCCCC---------cccChHH
Q 014769          118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPERN---------WEVDLDA  172 (419)
Q Consensus       118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~---------~~~~~~~  172 (419)
                      +|++.+++.... .| .+|+....+|++....+.....              .+..++......         +.-+++.
T Consensus       105 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (420)
T TIGR00700       105 EAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAA  184 (420)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHH
Confidence            999999987643 23 6788899999987544333211              011122110000         0012445


Q ss_pred             HHHhhc----CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769          173 VEALAD----KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT  246 (419)
Q Consensus       173 l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (419)
                      +++.+.    .+..+.+|..| +.-+|.. .+.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++....   
T Consensus       185 ~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~-~a~~~~~~~pD---  260 (420)
T TIGR00700       185 ARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAM-FACEHEGPEPD---  260 (420)
T ss_pred             HHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchh-HHHhhcCCCCC---
Confidence            655542    23445566677 5567775 46677999999999999999999999998776642 22222322222   


Q ss_pred             EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHH-HHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL-RESAE  324 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~-~~~~~  324 (419)
                      +.++||.++ +|+|+||+++++        ++++.+... ...+++.+++++.++.+.++....+.+.++..++ ...++
T Consensus       261 i~~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~  331 (420)
T TIGR00700       261 LITTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTD  331 (420)
T ss_pred             EEEeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            336899976 899999999975        576666533 2345678889998887777542222222222222 22333


Q ss_pred             HHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHH
Q 014769          325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPS  399 (419)
Q Consensus       325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~  399 (419)
                      .+.+....+|.+..+ .+. |.++++.+.... ....+   ...+...+ .++||.+.|+..|+  +++|+++.  .+++
T Consensus       332 ~L~~l~~~~~~~~~v-rg~-G~~~~i~~~~~~-~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~  405 (420)
T TIGR00700       332 RLTTLKAVDPRIGDV-RGL-GAMIAVELVDPG-TTEPDAGLAERIATAA-HAAGLLLLTCGMFG--NIIRFLPPLTIGDE  405 (420)
T ss_pred             HHHHHHhhCCCEEEe-ecc-ceEEEEEEecCC-CCCccHHHHHHHHHHH-HHCCeEEeccCCCC--CEEEEECCCCcCHH
Confidence            333333334444423 344 777788773210 00011   22333333 57899999987764  79999984  5899


Q ss_pred             HHHHHHHHHHHHHH
Q 014769          400 ALKDGLGRMKAFCQ  413 (419)
Q Consensus       400 ~l~~~l~~l~~~~~  413 (419)
                      +|++++++|.+++.
T Consensus       406 ~l~~~~~~l~~~l~  419 (420)
T TIGR00700       406 LLSEGLDILCAILA  419 (420)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999874

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.93  E-value=2e-22  Score=194.03  Aligned_cols=355  Identities=14%  Similarity=0.108  Sum_probs=216.1

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|.-... .-.-+|.+.+++.++++.......  .....+.+..+++.+....+.+ ..+.++++++|+
T Consensus        50 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGs  125 (451)
T PRK06918         50 DVDGNQYIDFAGAIGTIN-VGHSHPKVKEALHKQVDQYIHTGF--NVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGA  125 (451)
T ss_pred             eCCCCEEEEcCCchhhcC-CCCCCHHHHHHHHHHHHhccCccc--cccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcH
Confidence            346888999988853322 123578999999999876432111  1112344555566555433211 125899999999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCCE--------------EEEEeccCC--CCcccC--------hH
Q 014769          118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQVE--------------VRHFDLLPE--RNWEVD--------LD  171 (419)
Q Consensus       118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~~--------------~~~~~~~~~--~~~~~~--------~~  171 (419)
                      +|++.+++.... .| .+|+....+|++....+......              +..++....  ......        ++
T Consensus       126 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (451)
T PRK06918        126 EAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIE  205 (451)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHH
Confidence            999999987642 23 67888999999875444332110              111111100  000110        12


Q ss_pred             HHHHhh----cCCccEEEEeCCCCcc-cc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          172 AVEALA----DKNTAAMVIINPGNPC-GN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       172 ~l~~~~----~~~~~~v~i~~p~npt-G~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      .+++.+    ..+..+.+|+.|-... |. ..+.+++++|.++|+++|+++|+||+|.++.+.+.. .++..++..+.  
T Consensus       206 ~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD--  282 (451)
T PRK06918        206 EFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD--  282 (451)
T ss_pred             HHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC--
Confidence            233322    2345677788885443 65 456777999999999999999999999998776643 23344442222  


Q ss_pred             EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769          246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE  324 (419)
Q Consensus       246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  324 (419)
                       +.|+||.++ +|+|+||+++++        ++++.+.... ..+++.+++.+.++.++++....+.+.++.   ++..+
T Consensus       283 -i~t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~---~~~g~  349 (451)
T PRK06918        283 -LITVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRA---IELGK  349 (451)
T ss_pred             -EEeeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHH---HHHHH
Confidence             338999975 899999999975        5666665332 345678899998877777643222233322   22223


Q ss_pred             HHHHHhh----cCCCCCCCCCCCceEEEEeecCcc--cccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ec
Q 014769          325 ICYDGVK----EIPCISCPNKPEGSMVTMVKLNPW--LLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CA  396 (419)
Q Consensus       325 ~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~  396 (419)
                      .+.+.|+    +++.+..+ .+.|+++.|....+.  ..+.......+...+ .++||.+.|+..|+  +++|+++  ..
T Consensus       350 ~l~~~l~~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~~--~~lrl~p~l~~  425 (451)
T PRK06918        350 VVMNRFEEMKNKYNCIGDV-RGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTYG--NVIRVLMPLVI  425 (451)
T ss_pred             HHHHHHHHHHhhCCCceee-ccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCCC--CEEEEECCCcc
Confidence            3333332    33333323 566777776543211  000000122333333 67899999986653  7899998  36


Q ss_pred             CHHHHHHHHHHHHHHHHHHh
Q 014769          397 EPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       397 ~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++++|++++++|.+++++..
T Consensus       426 t~~~id~~l~~l~~~l~~~~  445 (451)
T PRK06918        426 TDEQLEEGLTIIEESLQACY  445 (451)
T ss_pred             CHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999998763

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.92  E-value=7.1e-23  Score=193.20  Aligned_cols=295  Identities=16%  Similarity=0.125  Sum_probs=195.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g  152 (419)
                      +.+|++ +...+|++.++++.        +.+++++++|+++|+..++.+++++||+|++++|+|..+..    .+...|
T Consensus        59 Y~r~~~-pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G  129 (394)
T PRK07050         59 YGLHAT-PTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG  129 (394)
T ss_pred             cCCCCC-HHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC
Confidence            455654 35678888888886        24689999999999999999999999999999999997653    456678


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++..       +.+.+++++++++++|++++|+||+|...   ++++|.++|+++|+++|+|++|....+    .
T Consensus       130 i~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~~---di~~I~~ia~~~gi~livD~a~a~~~~----~  195 (394)
T PRK07050        130 ITVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEVP---DVPAITAAARARGVVTAIDNTYSAGLA----F  195 (394)
T ss_pred             eEEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccHh---hHHHHHHHHHHcCCEEEEECCcccccc----c
Confidence            888876531       34678888888999999999999997655   499999999999999999999976332    1


Q ss_pred             CCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .++ ..+   ..+++.|++|.++. .+.+.|++++.++       ++.++++.... ...+.++.....+...++     
T Consensus       196 ~~l-~~G---aDi~v~S~tK~~~g~~~~~gG~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~-----  259 (394)
T PRK07050        196 KPF-EHG---VDISVQALTKYQSGGSDVLMGATITADA-------ELHAKLKLARMRLGIGVSADDCSLVLRGLP-----  259 (394)
T ss_pred             CHH-HcC---CeEEEEECCceecCCCCeeEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCCC-----
Confidence            111 122   24889999999653 3467898887552       46677765554 234445544433333232     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEE  374 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  374 (419)
                      .+..+.++..++...+.+.|+++|.+..+..|.                .|..+.+.+....  ...+..++++.+ +..
T Consensus       260 tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~--~~~~~~~~~~~l-~~~  336 (394)
T PRK07050        260 SLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--SPAQVDAFVEAL-ELF  336 (394)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC--CHHHHHHHHHcC-CCC
Confidence            244455666677778888888776554332221                1223334453210  001234555544 555


Q ss_pred             CeEeecCCCCC-----------------CCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          375 SVIVTPGIYVG-----------------LKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       375 gv~v~~g~~~~-----------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ++.++-|....                 ..+.+|||+|.+  +.+.+++.|.+++.+.
T Consensus       337 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE--~~~dl~~dl~~al~~~  392 (394)
T PRK07050        337 AIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLE--DEADLIADLEQALEAA  392 (394)
T ss_pred             eeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcC--CHHHHHHHHHHHHHHh
Confidence            55443333211                 025799999974  4566677777776654

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.92  E-value=2.8e-22  Score=189.05  Aligned_cols=328  Identities=14%  Similarity=0.069  Sum_probs=202.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC-------CCCCCC------CCCCCHHHHHHHHHHHHhhCCCCCCC
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-------KFNCYA------TNSGIPPARRAIADYLSRDLPYKLSA  107 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-------~~~~Y~------~~~g~~~lr~~ia~~l~~~~~~~~~~  107 (419)
                      ...+++|+..+   +.++..++.+.+++.+++...       .....+      ...-+.++|+.+++++      +. +
T Consensus         3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~------~~-~   72 (370)
T PRK05937          3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH------GA-P   72 (370)
T ss_pred             CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh------CC-C
Confidence            56789999997   456677788888888776542       111111      1223567888888887      33 2


Q ss_pred             CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------Cc
Q 014769          108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NT  181 (419)
Q Consensus       108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~  181 (419)
                      +.+++++|. .++..+...+.++||.|++..-.|......+.........++       ..|++.+++.++.      ++
T Consensus        73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~  144 (370)
T PRK05937         73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR  144 (370)
T ss_pred             eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence            335555555 556566666667888888878888776666655432222332       2478888887752      34


Q ss_pred             cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee
Q 014769          182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF  261 (419)
Q Consensus       182 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  261 (419)
                      .+|++++++|++|.+.|   +++|.++|+++|+++++|++|+...++.........++..+..+++.||||.++..|  .
T Consensus       145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~  219 (370)
T PRK05937        145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--A  219 (370)
T ss_pred             EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--e
Confidence            56678899999999999   889999999999999999999975443221111111221112356789999988777  3


Q ss_pred             EEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014769          262 GWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISC  338 (419)
Q Consensus       262 G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  338 (419)
                      | ++..+        +....+...   ..+..+.+++...++.++++..... .+..++++++.++++.+.|... +   
T Consensus       220 ~-vl~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l~~~-~---  285 (370)
T PRK05937        220 A-LLSSS--------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKFSSA-A---  285 (370)
T ss_pred             E-EEcCH--------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhcCCC-C---
Confidence            3 33332        344444321   1223345566655555555432111 1334567777777777766532 1   


Q ss_pred             CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          339 PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       339 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                         +.....  +.++.      .+...+... |.++||.+.... +...+++|++++  .+++|++.+++.|+++++++-
T Consensus       286 ---~~~~~~--i~~~~------~~~~~~~~~-L~~~gi~v~~~~-~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~  352 (370)
T PRK05937        286 ---PGCVQP--IFLPG------ISEQELYSK-LVETGIRVGVVC-FPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ  352 (370)
T ss_pred             ---CCCEEE--EEeCC------hhHHHHHHH-HHHCCeeEEeeC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence               111111  22332      124445444 477899886422 223568999995  689999999999999998875


Q ss_pred             cc
Q 014769          417 KK  418 (419)
Q Consensus       417 ~~  418 (419)
                      ++
T Consensus       353 ~~  354 (370)
T PRK05937        353 KN  354 (370)
T ss_pred             CC
Confidence            53

>PRK05968 hypothetical protein; Provisional

Probab=99.92  E-value=1.2e-22  Score=191.67  Aligned_cols=290  Identities=17%  Similarity=0.109  Sum_probs=195.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g  152 (419)
                      +.+|+.+ -..+|++.++++.      +.  +..+++++++.|+..++.+++++||+|+++.+.|.+.    ...+...|
T Consensus        57 Y~r~~~p-~~~~le~~lA~l~------g~--~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G  127 (389)
T PRK05968         57 YSRGDNP-TVRAFEEMLAKLE------GA--EDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMG  127 (389)
T ss_pred             ccCCCCh-hHHHHHHHHHHHh------CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcC
Confidence            3344443 3679999999987      22  3445566778899999999999999999999999863    34556678


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++.       .|++.+++++ +++++|++.+|+||++.   ..++++|.++|+++|+++|+|++|....+..   
T Consensus       128 ~~v~~vd~-------~d~~~l~~~i-~~tklV~ie~pt~~~~~---~~dl~~i~~la~~~gi~vivD~a~a~~~~~~---  193 (389)
T PRK05968        128 VEVDYVDG-------RDEEAVAKAL-PGAKLLYLESPTSWVFE---LQDVAALAALAKRHGVVTMIDNSWASPVFQR---  193 (389)
T ss_pred             ceEEEeCC-------CCHHHHHHhc-ccCCEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcchhccC---
Confidence            88887753       2788898888 46889999877776654   4569999999999999999999997654321   


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccch
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~  309 (419)
                       ++ ..+.   .+++.|++|.++.+| .+.|+++.+.        +++++++....  .....++..+..+...|+.   
T Consensus       194 -p~-~~g~---Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t---  257 (389)
T PRK05968        194 -PI-TLGV---DLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWLLLRGLRT---  257 (389)
T ss_pred             -ch-hcCC---cEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHHHHcccCc---
Confidence             12 1222   378889999987765 5788888654        46666664322  2234555555544444432   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEe
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE-----------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIV  378 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v  378 (419)
                        +..+.++..++...+.+.|+++|++..+..|.           .|..+.+.++..     .+..+|++.| +..++.+
T Consensus       258 --l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-----~~~~~f~~~L-~~~~~~~  329 (389)
T PRK05968        258 --LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-----IDVRAFADAL-KLFRLGV  329 (389)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----HHHHHHHHhC-CccEEec
Confidence              45566666777888889999888876454441           232444556421     1356677666 5556655


Q ss_pred             ecCCCCC----------------------C-CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          379 TPGIYVG----------------------L-KNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       379 ~~g~~~~----------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +-|....                      . ++.+|+|++..  +.+.+++.|++++.+.
T Consensus       330 s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--~~~dl~~dl~~al~~~  387 (389)
T PRK05968        330 SWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--GTEALWADLEQALAAA  387 (389)
T ss_pred             CCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHHh
Confidence            5444332                      1 46899999873  4566666777766543

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.92  E-value=1.4e-22  Score=193.22  Aligned_cols=349  Identities=15%  Similarity=0.128  Sum_probs=221.6

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.++||..|.-+.. .-.-+|.+.+++.+++.......+..  ...+....+++.+....+ ....+.++++++++
T Consensus        36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGs  111 (421)
T PRK06777         36 DVEGREYIDFAAGIAVLN-TGHRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAP-IDGPAKTAFFTTGA  111 (421)
T ss_pred             eCCCCEEEEcccCHHhhc-cCCCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCC-CCCCceEEEeCCcH
Confidence            446899999988843221 12357899999999987643322221  112333445555543222 11246899999999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CCE-------------EEEEeccCCCCc----ccChHHHHHhh
Q 014769          118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QVE-------------VRHFDLLPERNW----EVDLDAVEALA  177 (419)
Q Consensus       118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~----~~~~~~l~~~~  177 (419)
                      +|++.+++.... .| .+|+....+|++....+... +..             +..++. ++...    ..+++.+++.+
T Consensus       112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~  190 (421)
T PRK06777        112 EAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLF  190 (421)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHH
Confidence            999999987643 23 57889999999875444322 210             011111 11000    11255566666


Q ss_pred             c----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCC
Q 014769          178 D----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS  251 (419)
Q Consensus       178 ~----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  251 (419)
                      .    .+..+.++..| ++..|. +.|.+++++|.++|+++|+++|+||+|.++.+.|.. .....++..+.++   ++|
T Consensus       191 ~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~s  266 (421)
T PRK06777        191 KADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMA  266 (421)
T ss_pred             HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eee
Confidence            4    13345556666 677785 689999999999999999999999999988776643 2333333333333   789


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      |.++ +|+|+||+++++        ++++.+.... ..+++.+++.+.++.++|+....   +...++++++.+++.+.|
T Consensus       267 K~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L  334 (421)
T PRK06777        267 KSLG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVL  334 (421)
T ss_pred             hhhc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHH
Confidence            9986 899999999875        5666665432 34567799999999999875322   345566666677777766


Q ss_pred             hc----CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHH---HHhcCeEeecCCCCCCCCeEEEEe--ecCHHHH
Q 014769          331 KE----IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKL---AKEESVIVTPGIYVGLKNWLRIAF--CAEPSAL  401 (419)
Q Consensus       331 ~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~l---l~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l  401 (419)
                      ++    .|.+. ...+.|.++. +.+.... .+ .++.++...+   +.++||.+.|+..|+  +++||++  ..+++++
T Consensus       335 ~~l~~~~~~i~-~vrg~G~~~~-i~~~~~~-~~-~~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i  408 (421)
T PRK06777        335 EKAKASCPAIV-DIRARGSMVA-VEFNDPQ-TG-KPSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQF  408 (421)
T ss_pred             HHHHHhCCCeE-EecCceEEEE-EEEecCc-cC-CccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHH
Confidence            65    34333 2256666664 3342210 00 1122232222   356899999987664  6999999  5799999


Q ss_pred             HHHHHHHHHHHH
Q 014769          402 KDGLGRMKAFCQ  413 (419)
Q Consensus       402 ~~~l~~l~~~~~  413 (419)
                      ++++++|.+++.
T Consensus       409 ~~~~~~l~~~l~  420 (421)
T PRK06777        409 SKALNILTRLLA  420 (421)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998874

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.92  E-value=3.7e-22  Score=190.33  Aligned_cols=353  Identities=13%  Similarity=0.097  Sum_probs=219.2

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|.-+.. .-.-+|.+.+++.+++.......+..  ...+....+++.+.+..+ ....+.++++++
T Consensus        34 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~s  109 (421)
T PRK09792         34 LKDVEGNEYIDFAAGIAVLN-TGHRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTT  109 (421)
T ss_pred             EEeCCCCEEEEccCchhhhc-CCCCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCC
Confidence            33456889999988843322 12358999999999987643222211  123444455555544222 112368999999


Q ss_pred             HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCCccc----ChHHHHH
Q 014769          116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERNWEV----DLDAVEA  175 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----~~~~l~~  175 (419)
                      +++|++.+++.... .| .+|+....+|++....+... +.             .+..++..... ..+    +++.+++
T Consensus       110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~  188 (421)
T PRK09792        110 GAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIER  188 (421)
T ss_pred             hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHH
Confidence            99999999987653 23 57899999999864333222 11             01222221111 011    2466777


Q ss_pred             hhc----CCccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEec
Q 014769          176 LAD----KNTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS  249 (419)
Q Consensus       176 ~~~----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  249 (419)
                      .+.    .+..+.++..| ++|+|..+ |.+++++|.++|+++|+++|+||++.++.+.|.. ..+..++..+.   +.+
T Consensus       189 ~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t  264 (421)
T PRK09792        189 LFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMT  264 (421)
T ss_pred             HHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEE
Confidence            665    23344555555 78999865 9999999999999999999999999998777653 23333432222   458


Q ss_pred             CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHH
Q 014769          250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICY  327 (419)
Q Consensus       250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~  327 (419)
                      |||.+ .+|+|+||+++++        ++++.+.... ..+++.+++.+.++.+.++.... +.+++.+ .+.++.....
T Consensus       265 ~gK~l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~-~~g~~l~~~l  334 (421)
T PRK09792        265 MAKSL-AGGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERAN-QLGQRLKNTL  334 (421)
T ss_pred             eehhh-cCCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHHH
Confidence            89996 5899999999865        5666554332 33567888888877666664332 2233322 3333333333


Q ss_pred             HHhh-cCCCCCCCCCCCc-eEEEEeecCccccc--CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHH
Q 014769          328 DGVK-EIPCISCPNKPEG-SMVTMVKLNPWLLE--DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSAL  401 (419)
Q Consensus       328 ~~l~-~~~~~~~~~~p~~-g~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l  401 (419)
                      +.|. ++|.+   ..+.+ |+++|+.+++....  .......+...+ .++||.+.+...  ..+.+|+.+.  .+++++
T Consensus       335 ~~l~~~~p~v---~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei  408 (421)
T PRK09792        335 IDAKESVPAI---AAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA-LAQGLLLLTCGA--YGNVIRFLYPLTIPDAQF  408 (421)
T ss_pred             HHHHHhCCCc---ceecccceEEEEEecCCccCCcchHHHHHHHHHH-HHCCcEEeecCC--CCCEEEEeCCCcCCHHHH
Confidence            3333 24432   25566 99999999642100  001123455555 557999864321  2578999973  689999


Q ss_pred             HHHHHHHHHHHH
Q 014769          402 KDGLGRMKAFCQ  413 (419)
Q Consensus       402 ~~~l~~l~~~~~  413 (419)
                      ++++++|.++++
T Consensus       409 ~~~~~~l~~~l~  420 (421)
T PRK09792        409 DAAMKILQDALS  420 (421)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=4.8e-22  Score=180.78  Aligned_cols=333  Identities=19%  Similarity=0.177  Sum_probs=244.0

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP  137 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~  137 (419)
                      .+.++.+++++.+.+-    +...+  -...+-+.+.+.++..++.. +.+-++++++++.+++.++.++..|||+|++.
T Consensus        14 ~~v~~~V~~am~~~~~----~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~   86 (383)
T COG0075          14 VPVPPRVLLAMARPMV----GHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV   86 (383)
T ss_pred             CCCCHHHHHHhcCCCC----CCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence            4678888888765442    22333  23445555555555555533 34667888999999999999999999999999


Q ss_pred             CCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769          138 RPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR  213 (419)
Q Consensus       138 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  213 (419)
                      ..+.++  +.++++.+|.++..+...  .+-.+++++++++++.  +.+.|.+++.-.+||+..|   +++|.++|++|+
T Consensus        87 ~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g  161 (383)
T COG0075          87 VNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHG  161 (383)
T ss_pred             eCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHcC
Confidence            888876  468899999999988764  4557899999999984  4678899999999999999   999999999999


Q ss_pred             CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC-----------CccchhhHHHHH
Q 014769          214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN-----------GIFQKSGIIDSI  282 (419)
Q Consensus       214 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~-----------~~~~~~~~~~~l  282 (419)
                      .++|+|.+-+.    |.....+..++-|   +++++..|.++.| ..+|++..++..           -.++-....+.+
T Consensus       162 ~l~iVDaVsS~----Gg~~~~vd~wgiD---v~itgSQK~l~~P-PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~  233 (383)
T COG0075         162 ALLIVDAVSSL----GGEPLKVDEWGID---VAITGSQKALGAP-PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYM  233 (383)
T ss_pred             CEEEEEecccC----CCcccchhhcCcc---EEEecCchhccCC-CccceeEECHHHHHHHhcCCCCceeecHHHHHHHH
Confidence            99999999885    2233344455544   8888889997653 337777775421           112111122222


Q ss_pred             HhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCC
Q 014769          283 KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       283 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~  360 (419)
                      .....+.++++....+++.++|+....+.++.+.++++.+.+.+++.++++ |++.+..+.  ......+..|..    .
T Consensus       234 ~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g----~  308 (383)
T COG0075         234 EKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG----V  308 (383)
T ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC----C
Confidence            222345678888888999999988778889999999999999999999998 777443221  122333445542    2


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHHHHh
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~~~~  416 (419)
                       ++.+....+++++|+.+.+|........+||+. + .+..++..++..|..+++++.
T Consensus       309 -~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g  365 (383)
T COG0075         309 -DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG  365 (383)
T ss_pred             -CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence             344444578899999999888777788999998 5 588999999999999998763

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=1.7e-22  Score=181.87  Aligned_cols=345  Identities=16%  Similarity=0.161  Sum_probs=232.6

Q ss_pred             hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      ...+|+.+|||..|..... .-..+|.+.+++.++++.-..  +.|.     .+.+..+++.|.+..  + ..+.|++++
T Consensus        37 ~D~~G~~YlDf~~Giav~~-lGH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s--~-~~d~vff~N  107 (404)
T COG4992          37 WDQQGREYLDFAAGIAVNN-LGHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELS--P-FADRVFFCN  107 (404)
T ss_pred             ECCCCCEeeeeccceeeec-cCCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhC--c-cccEEEEcC
Confidence            3456899999999854422 224689999999998875321  2232     234555555554422  2 378999999


Q ss_pred             cHHHHHHHHHHHhcCC-----CCeEEeeCCCCCCcHHHHhhcCCEEEEE----eccCCCCcc--cChHHHHHhhcCCccE
Q 014769          115 GCKQAVEVILSVLARP-----GANVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPERNWE--VDLDAVEALADKNTAA  183 (419)
Q Consensus       115 g~~~al~~~~~~l~~~-----gd~vlv~~p~~~~~~~~~~~~g~~~~~~----~~~~~~~~~--~~~~~l~~~~~~~~~~  183 (419)
                      |++||++.++.....-     ..+|+....+|++-.-.+...+.+..+.    |+.+.-.+-  =|++++++++++++.+
T Consensus       108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taA  187 (404)
T COG4992         108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAA  187 (404)
T ss_pred             CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhccCeEE
Confidence            9999999999887532     2488888888887543333333332111    222211100  1789999999988777


Q ss_pred             EEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE
Q 014769          184 MVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG  262 (419)
Q Consensus       184 v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  262 (419)
                      |++-..+...|+. .+.++++++.++|++||+++|.||++.++..+|+-+ ....++..++++   ++.|.+ ..|+++|
T Consensus       188 vivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f-A~e~~gV~PDI~---tlaK~L-gGG~Pig  262 (404)
T COG4992         188 VIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF-AYEHYGVEPDIL---TLAKAL-GGGFPIG  262 (404)
T ss_pred             EEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH-HHHHhCCCCCEE---Eeeccc-cCCccce
Confidence            7777668888875 688999999999999999999999999988777543 223333333344   567995 5679999


Q ss_pred             EEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc----CCCCC
Q 014769          263 WLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE----IPCIS  337 (419)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~  337 (419)
                      .+++++        ...+.+.... ..+++.|+++..++.++++....+.   ..++.+++.+++.+.|++    .| +.
T Consensus       263 A~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~~l~~~~~-~v  330 (404)
T COG4992         263 AMLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEG---LLENVREKGEYLLQRLRELKRRYP-LV  330 (404)
T ss_pred             eeEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHHHHhhcCC-ce
Confidence            999864        3444444433 3467889999988888887644322   233444555555555554    33 21


Q ss_pred             CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                       .....-|+++-+.+....     ...+++..+ .++|+++.+..    ++.+|+.+  ..++++++++++++++++.+.
T Consensus       331 -~~vRG~GLmiGiel~~~~-----~a~~~~~~~-~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~  399 (404)
T COG4992         331 -KEVRGRGLMIGIELKEPY-----RARDIVRAL-REEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAA  399 (404)
T ss_pred             -eeeecceeEEEEEecCcc-----cHHHHHHHH-HHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence             223345788877776421     256676666 77899998765    56999998  469999999999999999876


Q ss_pred             hcc
Q 014769          416 TKK  418 (419)
Q Consensus       416 ~~~  418 (419)
                      ..+
T Consensus       400 ~~~  402 (404)
T COG4992         400 SAR  402 (404)
T ss_pred             hhc
Confidence            543

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.92  E-value=9e-23  Score=184.54  Aligned_cols=205  Identities=18%  Similarity=0.186  Sum_probs=168.0

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh----CCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR----SGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYV  112 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~----~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~  112 (419)
                      ..+.+.+.|+.+..     .|.++.|.+++...+.    +++...|+.  ..+..+.|+.+|+++      +.++.+|+|
T Consensus        39 ~~~~~~vyld~~at-----~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiF  107 (428)
T KOG1549|consen   39 HHGTRPVYLDNQAT-----GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVF  107 (428)
T ss_pred             cCCCccEEEecCcC-----CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEE
Confidence            44777888888853     3567888888887654    333323554  334789999999999      678889999


Q ss_pred             cccHHHHHHHHHHHhcC-CCC----eEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          113 TLGCKQAVEVILSVLAR-PGA----NVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       113 t~g~~~al~~~~~~l~~-~gd----~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      |+|+|++++++++.+.. ++|    .|++.+-.|+....   .++..|+.++++|+.  ...-+|++.+++.++++|+++
T Consensus       108 ts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv  185 (428)
T KOG1549|consen  108 TSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLV  185 (428)
T ss_pred             eCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEE
Confidence            99999999999999854 456    89998888887654   446668999999986  345689999999999999999


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      .+.+.+|.+|+++|   +++|+++|+++++.+++|.+++-    |.-...+..++.+   +...|.+|+||.+|  +|++
T Consensus       186 ~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaL  253 (428)
T KOG1549|consen  186 SIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGAL  253 (428)
T ss_pred             EEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEE
Confidence            99999999999999   99999999999999999999997    5566666677665   66668999999999  9999


Q ss_pred             EeeC
Q 014769          265 VTND  268 (419)
Q Consensus       265 ~~~~  268 (419)
                      +++.
T Consensus       254 Yvr~  257 (428)
T KOG1549|consen  254 YVRR  257 (428)
T ss_pred             EEcc
Confidence            9985

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.92  E-value=7.3e-22  Score=186.99  Aligned_cols=349  Identities=12%  Similarity=0.075  Sum_probs=227.0

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.++||..|.-... .-.-+|.+.+++.+++.....  +.. .-..+....+++.+....+   ..+.++++++++
T Consensus        36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~L~~~~~---~~~~v~f~~sGs  108 (408)
T PRK04612         36 DDQGREYLDLAAGIAVCG-LGHNDPDLVAALTEQAGKLWH--TSN-VFYSAPPLKLAEELVTASR---FAEKVFLCNSGT  108 (408)
T ss_pred             ECCCCEEEEcCccHhhcc-CCCCCHHHHHHHHHHHHhccc--ccc-ccCCHHHHHHHHHHHhhCC---CCCEEEEcCchH
Confidence            346889999988843321 123579999999999875322  221 1223445566666654322   136899999999


Q ss_pred             HHHHHHHHHhcC----CC-----CeEEeeCCCCCCcHHHHhhc-CCEEEE---EeccCC--CCcccChHHHHHhhcCCcc
Q 014769          118 QAVEVILSVLAR----PG-----ANVLLPRPGWPYYEGIAQRK-QVEVRH---FDLLPE--RNWEVDLDAVEALADKNTA  182 (419)
Q Consensus       118 ~al~~~~~~l~~----~g-----d~vlv~~p~~~~~~~~~~~~-g~~~~~---~~~~~~--~~~~~~~~~l~~~~~~~~~  182 (419)
                      +|++.+++....    .|     .+|+....+|++....+... +.....   .+..+.  .-.-.|++.+++.+..+..
T Consensus       109 eA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~  188 (408)
T PRK04612        109 EANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDV  188 (408)
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCE
Confidence            999999987542    12     36899999999875444322 211100   111110  0001367888888876678


Q ss_pred             EEEEeCCCCccccCCC--HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          183 AMVIINPGNPCGNVFT--YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       183 ~v~i~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      +++++.|.+++|-+++  .+++++|.++|+++|+++|+||+|.++...|..+. ..   ..+....+.+|||.++ +|+|
T Consensus       189 aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a-~~---~~~~~pdi~t~~K~l~-~G~p  263 (408)
T PRK04612        189 AAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFA-HW---QEQVTPDIVTLAKALG-GGFP  263 (408)
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhh-hh---hcCCCCCEEEEcchhc-CCCc
Confidence            8899999887876544  77999999999999999999999998766553221 11   1122355668999975 7999


Q ss_pred             eEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC----CC
Q 014769          261 FGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----PC  335 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~  335 (419)
                      +|++++++        ++++.+.... ..+++.+++.+.++.+.|+...+   ++..++++++.+++.+.|+++    +-
T Consensus       264 iga~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~  332 (408)
T PRK04612        264 IGAMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGV  332 (408)
T ss_pred             eEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            99999865        4666665432 33566788899888888876332   234455566666666665543    21


Q ss_pred             CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~  413 (419)
                      +. . ...-|+++.+.+....   ......+...+ .++||++.|..    .+.+|+.+  ..+++++++++++|++++.
T Consensus       333 i~-~-vrg~Gl~~~i~~~~~~---~~~a~~i~~~l-~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~  402 (408)
T PRK04612        333 FA-Q-VRGRGLMLGAVLAPAH---AGQAGAILDLA-AEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALA  402 (408)
T ss_pred             ee-e-eeccceEEEEEecCch---hhHHHHHHHHH-HHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHH
Confidence            22 1 2233556666653210   01134455444 67899997742    47899997  4689999999999999999


Q ss_pred             HHhccC
Q 014769          414 RHTKKH  419 (419)
Q Consensus       414 ~~~~~~  419 (419)
                      ++.+++
T Consensus       403 ~~~~~~  408 (408)
T PRK04612        403 DYVAQR  408 (408)
T ss_pred             HHhhcC
Confidence            987764

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.92  E-value=1.1e-22  Score=189.62  Aligned_cols=291  Identities=18%  Similarity=0.175  Sum_probs=194.2

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEE
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVR  156 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~  156 (419)
                      +.+|+. +...+|+++++++.        +.+++++++|+++|+..++. ++++||+|+++.+.|.+....+....... 
T Consensus        48 Y~R~~~-p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-  116 (364)
T PRK07269         48 YTRTKN-PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG-  116 (364)
T ss_pred             eeCCCC-ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-
Confidence            445665 46789999999997        35799999999999999995 56899999999999976544333221100 


Q ss_pred             EEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769          157 HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG  236 (419)
Q Consensus       157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  236 (419)
                      .+.+    .+..|++.+++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|....+.    .++ 
T Consensus       117 ~~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~----~pl-  184 (364)
T PRK07269        117 RFHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQ----RPI-  184 (364)
T ss_pred             cEEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-
Confidence            0111    1235889999999889999999999999999987   999999999999999999997643221    122 


Q ss_pred             ccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHH
Q 014769          237 LFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCK  314 (419)
Q Consensus       237 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~  314 (419)
                      ..+.+   +++.|++|.++.+| .=.|+++++++       ++.++++..... ....++...+.+...|+.     +..
T Consensus       185 ~~gaD---ivv~S~tK~l~g~~d~~gG~v~~~~~-------~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-----L~~  249 (364)
T PRK07269        185 ELGAD---IVLHSATKYLSGHNDVLAGVVVTNDL-------ELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-----LSL  249 (364)
T ss_pred             hhCCc---EEEecCceeccCCCcccceEEEeCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----HHH
Confidence            22333   88999999976544 23577776542       466666644432 334455555444444433     777


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHH---------HHhcCeEeecCCCC
Q 014769          315 LIDTLRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKL---------AKEESVIVTPGIYV  384 (419)
Q Consensus       315 ~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~l---------l~~~gv~v~~g~~~  384 (419)
                      +.++.+++...+.+.|+++|.+..+. ++.+|++.+. +...     .....|++.+         .....+.+.|+..+
T Consensus       250 r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~-~~~~-----~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~  323 (364)
T PRK07269        250 RMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFK-VADE-----TRIPHILNSLKVFTFAESLGGVESLITYPTTQT  323 (364)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEE-ECCH-----HHHHHHHHhCCcceEccCCCCcCeEeeCCcccc
Confidence            77788889999999999888765454 4556665544 4310     0122333322         11234445554432


Q ss_pred             CC-------------CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          385 GL-------------KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       385 ~~-------------~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      ..             ++.+|+|++.+  +.+.+++.|++++.
T Consensus       324 ~~~~~~~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al~  363 (364)
T PRK07269        324 HADIPAEVRHSYGLTDDLLRLSIGIE--DARDLIADLKQALE  363 (364)
T ss_pred             cccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHhc
Confidence            11             46899999974  56667777776653

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.92  E-value=6.6e-22  Score=188.04  Aligned_cols=227  Identities=15%  Similarity=0.163  Sum_probs=160.7

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~  160 (419)
                      -...|++.++++.        +.+..++++|+++|+..++..++++||+|+++.+.|.+.    ...+...|++++.++.
T Consensus        65 ~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~  136 (431)
T PRK08248         65 TTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP  136 (431)
T ss_pred             hHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence            4578899999987        246888999999999999999999999999999999753    3445678988888864


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|..    +....++ .++ 
T Consensus       137 -------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl-~~g-  200 (431)
T PRK08248        137 -------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI-EHG-  200 (431)
T ss_pred             -------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh-HcC-
Confidence                   3788999999888999999999999999999   78999999999999999999863    1112222 233 


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc-----------h--------------hhH-HHHHHhhh-ccccCCc
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ-----------K--------------SGI-IDSIKDCL-SIYSDIP  293 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------~--------------~~~-~~~l~~~~-~~~~~~~  293 (419)
                        ..+++.|++|.++.+|.++|++++.+.+..+.           +              ... ........ ......+
T Consensus       201 --aDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~  278 (431)
T PRK08248        201 --ADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS  278 (431)
T ss_pred             --CCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCC
Confidence              34888999999999999999988754321100           0              000 01111111 2222333


Q ss_pred             hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          294 TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       294 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      +...+.+..-|     +-+..+.++..++...+.+.|+++|.+..+..|
T Consensus       279 p~~a~l~~rgl-----~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yP  322 (431)
T PRK08248        279 PFNSFLLLQGL-----ETLHLRMERHSENALAVAKFLEEHEAVEWVSYP  322 (431)
T ss_pred             HHHHHHHhcCc-----CcHHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence            33333322222     235566677788888999999988776544333

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.92  E-value=3.2e-22  Score=188.01  Aligned_cols=282  Identities=19%  Similarity=0.169  Sum_probs=190.8

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEecc
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDLL  161 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~  161 (419)
                      ..+|++.+++++      +  .+++++++++++++..++. ++++||+|+++++.|.+...    .+...|+++..++. 
T Consensus        49 ~~~le~~la~l~------g--~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-  118 (378)
T TIGR01329        49 RTALESLLAKLD------K--ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT-  118 (378)
T ss_pred             HHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-
Confidence            457777777765      2  2567777777889998776 67899999999999987644    34557999888764 


Q ss_pred             CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                            .|++.+++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|....    ...++ .++. 
T Consensus       119 ------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~----~~~~l-~~g~-  183 (378)
T TIGR01329       119 ------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL----LCNPL-ELGA-  183 (378)
T ss_pred             ------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChh-hcCC-
Confidence                  2788999999888999999999999999998   9999999999999999999985422    12222 2233 


Q ss_pred             CcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769          242 VPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL  319 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  319 (419)
                        .+++.|++|.++.+ +...|+++++++       .+.++++.... .....++...+.+...+     +.+..+.++.
T Consensus       184 --Di~v~S~tK~l~G~~~~~~G~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l~~~~l-----~tl~~R~e~~  249 (378)
T TIGR01329       184 --DIVYHSATKFLAGHSDVMAGVLAVKGE-------EIAKKVYFLQNSTGSGLAPFDCWLLLRGI-----KTLAIRIEKQ  249 (378)
T ss_pred             --cEEEEecceeccCCccceeEEEEeCcH-------HHHHHHHHHHHhcCCcCCHHHHHHHHccC-----CCHHHHHHHH
Confidence              38899999987654 478899988552       35555655443 22333443332222222     3355666666


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769          320 RESAEICYDGVKEIPCISCPNKP----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY  383 (419)
Q Consensus       320 ~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~  383 (419)
                      .++...+.+.|+++|.+..+..|                ..|..+.+.+..     .....+|++.| +..++.++-|..
T Consensus       250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~-----~~~~~~~~~~L-~~~~i~~s~G~~  323 (378)
T TIGR01329       250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS-----VALSKRLVEAT-KLFSITVSFGSV  323 (378)
T ss_pred             HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-----HHHHHHHHHhC-cCcccccCCCCC
Confidence            77777777777766544222222                122344445531     11255777776 777887777764


Q ss_pred             CCC-----------------------CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          384 VGL-----------------------KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       384 ~~~-----------------------~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      ...                       ++.+|+|++.+  +.+.+++.|++++.+
T Consensus       324 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~  375 (378)
T TIGR01329       324 NSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE--DVDDLISDLDIAFVT  375 (378)
T ss_pred             CceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence            321                       35899999974  566777777777764

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.91  E-value=4.6e-22  Score=187.52  Aligned_cols=228  Identities=17%  Similarity=0.163  Sum_probs=161.7

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~  160 (419)
                      -...|++.++++.        .....+.++++++|+..++.+++++||+|+++.++|.+....    +...|+++.++..
T Consensus        62 tv~~lE~~la~le--------g~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~  133 (432)
T PRK06702         62 TLAAFEQKLAELE--------GGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP  133 (432)
T ss_pred             HHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence            4678999999987        235688899999999999999999999999999999865554    6778999888753


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                            .+|++.+++++++++++|++.+|+||++.+.+   +++|+++|+++|+++|+|++|..-.    ...+ ...+.
T Consensus       134 ------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~----~~~p-l~~GA  199 (432)
T PRK06702        134 ------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY----LCQA-FEHGA  199 (432)
T ss_pred             ------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh----hCCh-hhcCC
Confidence                  36889999999999999999999999999999   9999999999999999999985311    0111 12333


Q ss_pred             CCcEEEEecCCC-----cCCCCCcee-----EEEEeeCCCCccch--------------hhHHHHHH--hhhccccCCch
Q 014769          241 IVPVITLGSISK-----RWLVPGWRF-----GWLVTNDPNGIFQK--------------SGIIDSIK--DCLSIYSDIPT  294 (419)
Q Consensus       241 ~~~~i~~~s~sK-----~~~~~G~r~-----G~~~~~~~~~~~~~--------------~~~~~~l~--~~~~~~~~~~~  294 (419)
                      +   |++.|+||     ...++|.++     +|..++....+..+              +++....+  ....+....++
T Consensus       200 D---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp  276 (432)
T PRK06702        200 N---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSP  276 (432)
T ss_pred             C---EEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCH
Confidence            3   99999999     444555554     44443221111000              01111111  22233456666


Q ss_pred             HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ...+.+...|+.     +..+.++..++...+.+.|+++|.+..+..|
T Consensus       277 ~~a~l~~rgL~T-----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP  319 (432)
T PRK06702        277 FNAYISNIGLET-----LHLRMERHSENALAVAKWLADHERIEWVNYP  319 (432)
T ss_pred             HHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence            666666655554     5566666678889999999987765534333

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.91  E-value=1.7e-21  Score=182.85  Aligned_cols=309  Identities=19%  Similarity=0.272  Sum_probs=198.4

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP  139 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p  139 (419)
                      .++-.+++.+.+..+..  ++.    ..+++.+.+++.+..    +.+++++|+|+++++..++.++ .+|||+|+++++
T Consensus        10 ~~~e~~a~~~~~~~~~~--~~~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~   79 (376)
T TIGR02379        10 TGQELEYIAEAISEGKL--SGD----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY   79 (376)
T ss_pred             CHHHHHHHHHHHHcCCc--cCC----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence            45557888888876543  211    234555555554432    3468999999999999999987 789999999999


Q ss_pred             CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      +|......+...|++++.++++++ ++.+|++.+++++++++++|+   |+||+|...+   +++|.++|+++|+++|+|
T Consensus        80 t~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD  152 (376)
T TIGR02379        80 TFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIED  152 (376)
T ss_pred             CcHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence            999988888889999999998753 478999999999988888775   6678999988   889999999999999999


Q ss_pred             ccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-------
Q 014769          220 EVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-------  289 (419)
Q Consensus       220 e~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-------  289 (419)
                      ++|+.+. +.+...   ..++.    +.+.||+  |.+ .+|.+.|+++++++       ++.++++...+..       
T Consensus       153 aa~~~g~~~~~~~~---g~~~~----~~~fSf~~~K~l-~~g~~gG~v~~~~~-------~~~~~~~~~~~~g~~~~~~~  217 (376)
T TIGR02379       153 AAQGVMSTYKGRAL---GSIGH----LGTFSFHETKNY-TSGGEGGALLINDQ-------AFIERAEIIREKGTNRSQFF  217 (376)
T ss_pred             CccccCCccCCccc---CCCCC----EEEEeCCCCCcC-cccCCceEEEECCH-------HHHHHHHHHHHhCCCCcccc
Confidence            9999764 444322   22221    3333443  663 56778899988753       4666666543311       


Q ss_pred             ---------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCc---e-EE
Q 014769          290 ---------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP--C-ISCPNKPEG---S-MV  347 (419)
Q Consensus       290 ---------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~---g-~~  347 (419)
                                     +..+. .|+++.  +.+  -+.+++..++-++..+...+.|..++  + ......|.+   . ++
T Consensus       218 ~~~~~~~~~~~~g~n~~~~~-~~Aa~g--~~q--L~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~  292 (376)
T TIGR02379       218 RGEVDKYTWRDIGSSYLPSE-LQAAYL--WAQ--LEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHM  292 (376)
T ss_pred             ccCCCcceeeeecccCCccH-HHHHHH--HHH--HHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEE
Confidence                           01111 122221  111  13345544455555555566665542  1 121111211   1 23


Q ss_pred             EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC----------CCC------------CCeEEEEe--ecCHHHHHH
Q 014769          348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY----------VGL------------KNWLRIAF--CAEPSALKD  403 (419)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~----------~~~------------~~~~Ris~--~~~~~~l~~  403 (419)
                      +++.++..     .+..++...| +++||.+.+...          +..            ...+.|.+  ..++++++.
T Consensus       293 ~~i~~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~  366 (376)
T TIGR02379       293 FYIKLKDE-----DDRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQAR  366 (376)
T ss_pred             EEEEECCc-----CCHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHH
Confidence            34555531     1356666666 778998764321          100            23466665  358899999


Q ss_pred             HHHHHHHHH
Q 014769          404 GLGRMKAFC  412 (419)
Q Consensus       404 ~l~~l~~~~  412 (419)
                      .++.|++++
T Consensus       367 i~~~i~~~~  375 (376)
T TIGR02379       367 VIQTICDYL  375 (376)
T ss_pred             HHHHHHHHh
Confidence            999998764

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.91  E-value=6.2e-22  Score=188.62  Aligned_cols=165  Identities=21%  Similarity=0.200  Sum_probs=133.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g  152 (419)
                      +.+|+.+ -..+|++.+++++      +  .+..++++++++++..++.+++++||+|+++.+.|.+.    ...+...|
T Consensus        51 ysr~~~p-~~~~le~~lA~l~------g--~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G  121 (418)
T TIGR01326        51 YSRLMNP-TTDVLEQRIAALE------G--GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG  121 (418)
T ss_pred             eECCCCh-hHHHHHHHHHHHh------C--CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence            3455543 4579999999987      2  35788999999999999999999999999999998653    34456788


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      ++++.++.       .|++.+++++++++++|++.+|+||||.+.+   +++|.++|+++|+++|+|++|+....    .
T Consensus       122 ~~v~~v~~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~  187 (418)
T TIGR01326       122 IEVRFVDP-------DDPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----C  187 (418)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----C
Confidence            88888763       1789999999888999999999999999998   88999999999999999999974321    1


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      .++ .   .+..+++.|+||.++.+|.|+||++++.
T Consensus       188 ~~l-~---~g~Divv~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       188 RPI-D---HGADIVVHSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             Cch-h---cCCeEEEECccccccCCccceEEEEEec
Confidence            111 1   2346899999999999999999999865

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.91  E-value=2.8e-22  Score=191.79  Aligned_cols=348  Identities=15%  Similarity=0.094  Sum_probs=215.7

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.++||..|.+...-. ..+|.+.+++.+++.... ..|.+..+..+|.+.+++.+      + ..+.+++++|++
T Consensus        46 d~dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~------~-~~~~v~~~~sGs  116 (426)
T PRK00062         46 DVDGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV------P-SIEMVRMVNSGT  116 (426)
T ss_pred             eCCCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC------C-CCCEEEEecCHH
Confidence            34689999999986543211 367999999999998743 23444445556666666654      1 356899999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-CCEEE-----EEeccC----CCCc---ccChHHHHHhhcC--C
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-QVEVR-----HFDLLP----ERNW---EVDLDAVEALADK--N  180 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~~~~-----~~~~~~----~~~~---~~~~~~l~~~~~~--~  180 (419)
                      +|++.+++....  ..++|+..+++|+++...+... +....     ..+..+    ....   ..|++.+++.+..  +
T Consensus       117 eA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~  196 (426)
T PRK00062        117 EATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGD  196 (426)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCC
Confidence            999999998654  2588999999999875333221 10000     000000    0000   1267888877742  2


Q ss_pred             ccEEEEeCC-CCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          181 TAAMVIINP-GNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       181 ~~~v~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ....+++.| ...+|.+.+ .+++++|.++|++||+++|+||+|.++.+++..  ....++..+.   +.++||.++ .|
T Consensus       197 ~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~--~~~~~~~~pD---i~~~gK~l~-~G  270 (426)
T PRK00062        197 EIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGG--AQGYYGVTPD---LTTLGKIIG-GG  270 (426)
T ss_pred             cEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCcc--HHHHhCCCcc---hHhhhhHhh-CC
Confidence            334445554 445787765 899999999999999999999999987443211  1111221111   348899975 78


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhh---h-ccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDC---L-SIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~---~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      +++|++++++        ++++.++..   . ..+++.+++.+.++.+.|+.... +.+++.++.....++.+.+.+++.
T Consensus       271 ~p~ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  342 (426)
T PRK00062        271 LPVGAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKA  342 (426)
T ss_pred             CcceeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999998865        577777522   1 22456788888888888875332 234444444444444444444444


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccC-----CCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLED-----IND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGL  405 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l  405 (419)
                       ++..-..+.+. ++-+.+.......     ..+   ...+...+ .++||.+.|..    .+.+++++..+++++++++
T Consensus       343 -~~~~~vrg~G~-~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~~  415 (426)
T PRK00062        343 -GIPLTVNRVGS-MFGLFFTDEPVTNYADAKKSDTERFARFFHAM-LDEGVYLAPSQ----FEAGFVSAAHTDEDIEKTL  415 (426)
T ss_pred             -CCceEEEEecc-eEEEEEecCCCcchhhhccccHHHHHHHHHHH-HHCCeEeecCC----cCceeeeccCCHHHHHHHH
Confidence             33211123444 4444443211000     001   13555555 56799998753    2356788888999999999


Q ss_pred             HHHHHHHHHH
Q 014769          406 GRMKAFCQRH  415 (419)
Q Consensus       406 ~~l~~~~~~~  415 (419)
                      +.+++++.++
T Consensus       416 ~~l~~~l~~~  425 (426)
T PRK00062        416 EAARKAFAAL  425 (426)
T ss_pred             HHHHHHHHhh
Confidence            9999999765

>PLN02624 ornithine-delta-aminotransferase

Probab=99.91  E-value=1.1e-21  Score=189.36  Aligned_cols=345  Identities=15%  Similarity=0.100  Sum_probs=211.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+|+.++||..|.-+.. .-.-+|.+.+++.+++....... +.......++.+.++++.    +    .+.++++++++
T Consensus        72 ~dG~~ylD~~sg~~~~~-~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~----~----~~~~~f~~SGs  142 (474)
T PLN02624         72 PEGKKYLDFLSAYSAVN-QGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF----G----YDMVLPMNTGA  142 (474)
T ss_pred             CCCCEEEEcccchhccc-CCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc----C----CCeEEEeCChH
Confidence            35788999988743321 12348999999999987643211 111223345555555543    2    36899999999


Q ss_pred             HHHHHHHHHhcC--------C-C-CeEEeeCCCCCCcHHHHhhcCCEEE----EEeccCCCC--cccChHHHHHhhcC--
Q 014769          118 QAVEVILSVLAR--------P-G-ANVLLPRPGWPYYEGIAQRKQVEVR----HFDLLPERN--WEVDLDAVEALADK--  179 (419)
Q Consensus       118 ~al~~~~~~l~~--------~-g-d~vlv~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~~~~~l~~~~~~--  179 (419)
                      +|++.+++....        + + ..|+....+|++....+........    +.+..+.-.  .-.|++.+++.++.  
T Consensus       143 eA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  222 (474)
T PLN02624        143 EGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDG  222 (474)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCC
Confidence            999999986542        1 2 2577788888876433332221110    001000000  00167888887752  


Q ss_pred             -CccEEEEeCCCCccccCCCHH-HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC
Q 014769          180 -NTAAMVIINPGNPCGNVFTYH-HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP  257 (419)
Q Consensus       180 -~~~~v~i~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  257 (419)
                       +..++++..++|++|.+++.+ ++++|.++|++||+++|+||+|.++...|.... ....+....++   ++||.++.+
T Consensus       223 ~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a-~~~~~i~pDiv---~lsK~lggG  298 (474)
T PLN02624        223 DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLA-CDWEEVRPDVV---ILGKALGGG  298 (474)
T ss_pred             CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhh-HHhcCCCCCEE---EecccccCC
Confidence             345566667799999987655 699999999999999999999998765554221 11122222233   468999877


Q ss_pred             CceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc----
Q 014769          258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE----  332 (419)
Q Consensus       258 G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----  332 (419)
                      ++++|++++++        ++++.+.... ..+++.+++.+.++.+.|+......   ..+++.++.+.+++.|++    
T Consensus       299 ~~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~  367 (474)
T PLN02624        299 VIPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQ  367 (474)
T ss_pred             CCcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHh
Confidence            79999999865        4666554332 2345678888888888886532222   222333444444444433    


Q ss_pred             CCC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769          333 IPC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK  409 (419)
Q Consensus       333 ~~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~  409 (419)
                      ++. +..+ .+. |.+..+.++.... +.....++...| .++||.+.|+.    .+++||++  ..++++|++++++|+
T Consensus       368 ~~~~i~~v-rg~-G~~~~i~l~~~~~-~~~~a~~~~~~L-~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L~  439 (474)
T PLN02624        368 FPKLIKEV-RGR-GLLNAVVLNSPKL-GPVSAYDVCLKL-KERGLLAKPTH----DTIIRLAPPLSISEDELQECSKALS  439 (474)
T ss_pred             CCCceEEE-Eee-EEEEEEEecCCCc-ChHHHHHHHHHH-HhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHHH
Confidence            332 2212 334 4444455542110 001245666665 67899998863    57899997  578999999999999


Q ss_pred             HHHHHH
Q 014769          410 AFCQRH  415 (419)
Q Consensus       410 ~~~~~~  415 (419)
                      +++++-
T Consensus       440 ~~l~~~  445 (474)
T PLN02624        440 DVLEHD  445 (474)
T ss_pred             HHHHHH
Confidence            998754

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.91  E-value=8.2e-22  Score=187.25  Aligned_cols=293  Identities=17%  Similarity=0.165  Sum_probs=187.1

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh----cCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~  160 (419)
                      ...+|++.++++.      +  .+..++++++++|+..++.++.++||+|+++.+.|.+....+..    .|+++.+++.
T Consensus        59 t~~~Le~~lA~l~------g--~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~  130 (425)
T PRK06084         59 TNDVLEQRVAALE------G--GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH  130 (425)
T ss_pred             hHHHHHHHHHHHh------C--CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence            4578999999986      2  34667888889999999999999999999999999864443332    3555555432


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             .|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|+....    ..++ .++.
T Consensus       131 -------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p~-~~ga  195 (425)
T PRK06084        131 -------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRPF-EHGA  195 (425)
T ss_pred             -------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChh-hcCC
Confidence                   3789999999888999999999999999999   89999999999999999999985322    1122 2233


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch------------h--------------hHHHHHH-h-hhccccCC
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK------------S--------------GIIDSIK-D-CLSIYSDI  292 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~------------~--------------~~~~~l~-~-~~~~~~~~  292 (419)
                         .+++.|++|.++.+|.++|.+++.+.......            +              ......+ . ........
T Consensus       196 ---Divv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l  272 (425)
T PRK06084        196 ---DIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAAL  272 (425)
T ss_pred             ---CEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCC
Confidence               38899999999999999988877532100000            0              0000000 0 11222333


Q ss_pred             chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----------------C-ceEEEEeecCcc
Q 014769          293 PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP----------------E-GSMVTMVKLNPW  355 (419)
Q Consensus       293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----------------~-~g~~~~~~~~~~  355 (419)
                      ++...+.+..-|     +-+..+.++..++...+.+.|+++|.+..+..|                . .|-.+.+.+...
T Consensus       273 ~~~~a~l~lrgl-----~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~  347 (425)
T PRK06084        273 SPFNAFLILQGL-----ETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGG  347 (425)
T ss_pred             CHHHHHHHHcCc-----CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCC
Confidence            444333332222     336666677788888899999887765534333                2 233444555421


Q ss_pred             cccCCCCHHHHHHHHHHhcCeEeecCCCCC----------------------C-CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVIVTPGIYVG----------------------L-KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                          .....+|++.| +-..+.++-|....                      . ++.+|||++.+  +.+.+++.|.+++
T Consensus       348 ----~~~~~~f~~~l-~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE--d~~dLi~dl~~Al  420 (425)
T PRK06084        348 ----QAAGARFIDAL-KLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGIE--HIDDIIADLAQAL  420 (425)
T ss_pred             ----HHHHHHHHHhC-CcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHH
Confidence                01123444443 22222222222110                      0 35899999974  5667777777777


Q ss_pred             HHH
Q 014769          413 QRH  415 (419)
Q Consensus       413 ~~~  415 (419)
                      ...
T Consensus       421 ~~~  423 (425)
T PRK06084        421 DAS  423 (425)
T ss_pred             Hhh
Confidence            653

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.91  E-value=4.8e-21  Score=183.18  Aligned_cols=354  Identities=14%  Similarity=0.094  Sum_probs=216.3

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.++||..|.-... .-.-+|.+.+++.+++.....  +.......+.+..+++.+.+..+  ...+.++++++
T Consensus        35 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~s  109 (443)
T PRK08360         35 VWDIEGNEYIDFLSDAAVQN-VGHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLS  109 (443)
T ss_pred             EEECCCCEEEEccccHhhcc-cCCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCC
Confidence            33456899999988843321 123589999999999876422  22211223445556666554332  22368999999


Q ss_pred             HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhh-cCC------------EEEEEeccCCC--Ccc--------cCh
Q 014769          116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQR-KQV------------EVRHFDLLPER--NWE--------VDL  170 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~--------~~~  170 (419)
                      +++|++.+++.... .| ..|+....+|++....+.. .+.            .+.+++.....  .+.        .++
T Consensus       110 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (443)
T PRK08360        110 GSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV  189 (443)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence            99999999987643 23 6788888888876432222 111            11222211100  000        123


Q ss_pred             HHHHHhhcC----CccEEEEeCC-CCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769          171 DAVEALADK----NTAAMVIINP-GNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV  244 (419)
Q Consensus       171 ~~l~~~~~~----~~~~v~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  244 (419)
                      +.+++.+..    +..+.++..| +||+|.+++ .++++++.++|+++|+++|+||+|.++.+.|..+ ....++..+++
T Consensus       190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDi  268 (443)
T PRK08360        190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDI  268 (443)
T ss_pred             HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCE
Confidence            445555531    2334455566 699998776 6689999999999999999999999887666432 22222323333


Q ss_pred             EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA  323 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  323 (419)
                      +   ++||.++ +|+|+||+++++        ++++.+.... ..+++.+++.+.++.++|+....+   ...++++++.
T Consensus       269 i---tlsK~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g  333 (443)
T PRK08360        269 I---TLGKPLG-GGLPISATIGRA--------EIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK---NLLKRAEKLG  333 (443)
T ss_pred             E---Eeccccc-CCceeEEEEEcH--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc---CHHHHHHHHH
Confidence            3   6799976 899999999875        5777775442 335667888888888888763322   2334445555


Q ss_pred             HHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc---ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769          324 EICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL---LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--  394 (419)
Q Consensus       324 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--  394 (419)
                      +++++.|++    .|.+. . ...-|.++-+.+....   .........+...+ .++||.+.+..    .+.+|+++  
T Consensus       334 ~~l~~~L~~l~~~~~~v~-~-vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~----~~~lr~~P~l  406 (443)
T PRK08360        334 NYTKKRLEEMKKKHELIG-D-VRGIGLMIGVDLVKDRETKERAYEEAAKVVWRA-WELGLIVTFFS----GNVLRIQPPL  406 (443)
T ss_pred             HHHHHHHHHHHHhCCCee-e-eeccceEEEEEEecCCcccCccHHHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCC
Confidence            555555443    33222 1 2234556566553210   00000123455555 66899986532    47799977  


Q ss_pred             ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          395 CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       395 ~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      ..++++++++++++.++++...+
T Consensus       407 ~~t~~~id~~~~~l~~~l~~~~~  429 (443)
T PRK08360        407 TIEKEVLDEGLDILEEAIEDVEE  429 (443)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh
Confidence            57999999999999999987643

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.91  E-value=1.4e-21  Score=182.87  Aligned_cols=289  Identities=16%  Similarity=0.131  Sum_probs=191.7

Q ss_pred             CCCCCCCC---HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----Hhhc
Q 014769           79 CYATNSGI---PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRK  151 (419)
Q Consensus        79 ~Y~~~~g~---~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~  151 (419)
                      .|+. .|.   ..|++.++++.        ..+++++++|+++|+..++.+++++||.|++++|.|.+....    +...
T Consensus        43 ~Y~r-~gnPt~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~  113 (377)
T TIGR01324        43 TYGR-RGTLTHFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRM  113 (377)
T ss_pred             cccC-CCCccHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhc
Confidence            4653 344   69999999987        246899999999999999999999999999999999875433    3556


Q ss_pred             CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC
Q 014769          152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP  231 (419)
Q Consensus       152 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  231 (419)
                      |+++..++.  .     +.+.+++++++++++|++.+|+||+|.+.+   +++|+++|+++|+++|+|++|+.....   
T Consensus       114 gi~v~~~d~--~-----~~e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~---  180 (377)
T TIGR01324       114 GVDITYYDP--L-----IGEDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF---  180 (377)
T ss_pred             CcEEEEECC--C-----CHHHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc---
Confidence            777766542  1     227888888889999999999999988876   999999999999999999999863321   


Q ss_pred             CCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch
Q 014769          232 YTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       232 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~  309 (419)
                       .++ .++.   .++++|++|.++.+| ...|++++++        +..+.++... ......++...+.+...+     
T Consensus       181 -~pl-~~ga---Divv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl-----  242 (377)
T TIGR01324       181 -KPL-EHGV---DISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGL-----  242 (377)
T ss_pred             -Ccc-ccCc---eEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhh-----
Confidence             122 2333   489999999976553 6788887754        3455555332 223334544433333333     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKE  373 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~  373 (419)
                      +.+..+.++..++...+.+.|++.|.+..+..|.                .|-.+.++++...   ......|++.| +-
T Consensus       243 ~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~---~~~~~~~~~~l-~~  318 (377)
T TIGR01324       243 RTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT---QKQVHAFLDHL-QL  318 (377)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC---HHHHHHHHHhC-Cc
Confidence            3355556777777778888888776654343342                2333445564210   01234555554 44


Q ss_pred             cCeEeecCCCCC-------------------CCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          374 ESVIVTPGIYVG-------------------LKNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       374 ~gv~v~~g~~~~-------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      .++.++-|....                   .++.+|+|++.+  +.+++++.|.+++.
T Consensus       319 ~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE--~~~dl~~dl~~al~  375 (377)
T TIGR01324       319 FGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE--NVDDLKADLKAGFE  375 (377)
T ss_pred             ceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCCC--CHHHHHHHHHHHHh
Confidence            444433332210                   125799999874  45666666666664

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK05939 hypothetical protein; Provisional

Probab=99.91  E-value=1.8e-21  Score=183.51  Aligned_cols=225  Identities=16%  Similarity=0.109  Sum_probs=155.2

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCC
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPE  163 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~  163 (419)
                      ..|++.++++.        ..+..++++++++|+..++.+++++||+|+++++.|+...   ..+...|+++..++.   
T Consensus        50 ~~lE~~la~le--------g~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~---  118 (397)
T PRK05939         50 AALEAKITKME--------GGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA---  118 (397)
T ss_pred             HHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC---
Confidence            38999999986        2234566666799999999999999999999999997643   345667888888764   


Q ss_pred             CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769          164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP  243 (419)
Q Consensus       164 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  243 (419)
                          .|++++++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|....    ...+ ..+   +.
T Consensus       119 ----~d~e~l~~~l~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~----~~~~-~~~---ga  183 (397)
T PRK05939        119 ----TDVQNVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPW----LFRP-KDV---GA  183 (397)
T ss_pred             ----CCHHHHHHhCCCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCccccc----ccCc-ccc---CC
Confidence                2789999999989999999999999999966   9999999999999999999986421    1111 112   24


Q ss_pred             EEEEecCCCcCCCCCceeEEEEeeCCCCcc------ch--------hhHHHHHHhh--hccccCCchHHHHHHHHHHccc
Q 014769          244 VITLGSISKRWLVPGWRFGWLVTNDPNGIF------QK--------SGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKT  307 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~------~~--------~~~~~~l~~~--~~~~~~~~~~~~~a~~~~l~~~  307 (419)
                      .+++.|+||.++..|.++|++++.+.....      ..        ...+..++..  .......++...+.+..-+   
T Consensus       184 Divv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl---  260 (397)
T PRK05939        184 SLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGA---  260 (397)
T ss_pred             EEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc---
Confidence            589999999999999999998874321000      00        0001122211  1222233433333322222   


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          308 KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                        +-+..+.++..++...+.+.|+..|.+..+..|
T Consensus       261 --~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP  293 (397)
T PRK05939        261 --ETLALRVDRSCSNALALAQFLEAHPKVARVYYP  293 (397)
T ss_pred             --CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence              235555566667888899999887765434444

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.91  E-value=8.2e-21  Score=179.17  Aligned_cols=312  Identities=14%  Similarity=0.108  Sum_probs=205.9

Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCCC
Q 014769           62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPG  140 (419)
Q Consensus        62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p~  140 (419)
                      +.-.+++.+.+..+.. .+++  ...+|++++++++      +.  +++++++|+++|+..++.++ .++||+|++++++
T Consensus        14 ~~e~~~~~~~l~~~~~-~~g~--~~~~le~~la~~~------g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~   82 (379)
T PRK11658         14 DEELAAVKEVLRSGWI-TTGP--KNQALEQAFCQLT------GN--QHAIAVSSATAGMHITLMALGIGPGDEVITPSLT   82 (379)
T ss_pred             HHHHHHHHHHHHcCCc-cCCH--hHHHHHHHHHHHh------CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence            4557778888876543 2333  5789999999998      22  46888999999999999999 7899999999999


Q ss_pred             CCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769          141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE  220 (419)
Q Consensus       141 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  220 (419)
                      |..+...+...|++++.++++++ ++.+|++.+++++++++++|+   |.|++|...+   +++|.++|+++|+++|+|+
T Consensus        83 ~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~  155 (379)
T PRK11658         83 WVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDA  155 (379)
T ss_pred             HHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEEC
Confidence            99998888999999999998643 467899999999988888776   5667999887   8899999999999999999


Q ss_pred             ccccc-ccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcccc---------
Q 014769          221 VYGHL-TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYS---------  290 (419)
Q Consensus       221 ~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------  290 (419)
                      +|+.. .+.+..   +...   +.  .+.||++...+++.+.|+++++++       ++.++++.......         
T Consensus       156 a~a~g~~~~~~~---~g~~---g~--~~~Sf~~~K~l~~g~GG~v~~~~~-------~~~~~~~~~~~~G~~~~~~~~~~  220 (379)
T PRK11658        156 AHAVGTYYKGRH---IGAR---GT--AIFSFHAIKNITCAEGGLVVTDDD-------ELADRLRSLKFHGLGVDAFDRQT  220 (379)
T ss_pred             CCccCCeECCee---cCCC---CC--EEEeCCCCCcCcccCceEEEECCH-------HHHHHHHHHHHcCCCcchhhhhc
Confidence            99853 333321   1222   21  345666555567777898887642       45555554321110         


Q ss_pred             ------------CCc--hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEE-EEee
Q 014769          291 ------------DIP--TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSMV-TMVK  351 (419)
Q Consensus       291 ------------~~~--~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~-~~~~  351 (419)
                                  +.+  .....|+.....   .+.+++..++-++..+.+.+.|++++... +..|.    ..++ ..+.
T Consensus       221 ~~~~~~~~~~~~G~n~~~~~l~AAl~~~q---l~~l~~~~~~r~~~a~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~  296 (379)
T PRK11658        221 QGRAPQAEVLTPGYKYNLADINAAIALVQ---LAKLEALNARRREIAARYLQALADLPFQP-LSLPAWPHQHAWHLFIIR  296 (379)
T ss_pred             ccCCCcceeeccccccCcCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CcCCCCCCceeEEEEEEE
Confidence                        000  011112211111   25577777777888888888888775432 21222    1222 2234


Q ss_pred             cCcccccCCCCHHHHHHHHHHhcCeEeecCCC-------C----C---C-------CCeEEEEe--ecCHHHHHHHHHHH
Q 014769          352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIY-------V----G---L-------KNWLRIAF--CAEPSALKDGLGRM  408 (419)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------~----~---~-------~~~~Ris~--~~~~~~l~~~l~~l  408 (419)
                      ++.... + .+..++...| +++||.+.+...       |    .   .       ...+.|.+  ..++++++..++.|
T Consensus       297 ~~~~~~-~-~~r~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i  373 (379)
T PRK11658        297 VDEERC-G-ISRDALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITAL  373 (379)
T ss_pred             ECCccc-c-CCHHHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHH
Confidence            432100 1 1456777666 677987653210       0    0   0       23455555  35789999999999


Q ss_pred             HHHHH
Q 014769          409 KAFCQ  413 (419)
Q Consensus       409 ~~~~~  413 (419)
                      ++++.
T Consensus       374 ~~~~~  378 (379)
T PRK11658        374 QQIAG  378 (379)
T ss_pred             HHHHh
Confidence            98763

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.91  E-value=2.6e-21  Score=184.55  Aligned_cols=334  Identities=15%  Similarity=0.139  Sum_probs=213.5

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+|..++||..|..+.. .-..+|++.+++.++++..... ......-..++.+.+++++    +    .+.++++++++
T Consensus        34 ~~g~~~lD~~s~~~~~~-~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs  104 (401)
T TIGR01885        34 VEGKRYLDFLSAYSAVN-QGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLPMNTGA  104 (401)
T ss_pred             CCCCEEEEcccCHhhcc-CCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEEeCccH
Confidence            35888999988743311 1124799999999988653211 1001122345555555553    2    36899999999


Q ss_pred             HHHHHHHHHhcC---------C-CCeEEeeCCCCCCc-HHHHhhcCC------------EEEEEeccCCCCcccChHHHH
Q 014769          118 QAVEVILSVLAR---------P-GANVLLPRPGWPYY-EGIAQRKQV------------EVRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus       118 ~al~~~~~~l~~---------~-gd~vlv~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~  174 (419)
                      +|+..++..+..         + .+.|+....+|++. ...+...+.            .+..++.       .|++.++
T Consensus       105 ~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le  177 (401)
T TIGR01885       105 EAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALE  177 (401)
T ss_pred             HHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHH
Confidence            999999998532         2 36778888888764 222222221            1111111       2678888


Q ss_pred             Hhhc---CCccEEEEeCCCCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769          175 ALAD---KNTAAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI  250 (419)
Q Consensus       175 ~~~~---~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  250 (419)
                      +.++   ++..++++..+++++|...+ .+++++|.++|++||+++|+||+|.++.+.|..+ .....+..+.++   ++
T Consensus       178 ~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~  253 (401)
T TIGR01885       178 EALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LL  253 (401)
T ss_pred             HHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Ee
Confidence            7774   23445555556899999875 5579999999999999999999998776655432 121112122233   46


Q ss_pred             CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      ||.++..++|+|++++++        ++++.++.. ...+++.+++.+.++.++|+....+   ...+++++..+.+.+.
T Consensus       254 gK~l~~g~~~ig~v~~~~--------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~  322 (401)
T TIGR01885       254 GKALSGGVYPVSAVLADD--------DVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQ  322 (401)
T ss_pred             eccccCCCCCcEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence            799877669999999865        577766542 2334566788888888888753322   2345666778888888


Q ss_pred             hhcCCCCCCC--CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHH
Q 014769          330 VKEIPCISCP--NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGL  405 (419)
Q Consensus       330 l~~~~~~~~~--~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l  405 (419)
                      |++++ ..++  ..+. |.+..+.++....  ..+..++..+| .++||.+.|+.    .+.+|+++  ..++++|++++
T Consensus       323 L~~l~-~~~~~~~~g~-g~~~~i~~~~~~~--~~~~~~l~~~l-~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l  393 (401)
T TIGR01885       323 LKKLP-KPIITEVRGR-GLLNAIVIDESKT--GRTAWDLCLKL-KEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGL  393 (401)
T ss_pred             HHhcc-CCceeEEeec-CeeEEEEeccCcc--hhHHHHHHHHH-HhCCEEEEecC----CCEEEEeCCccCCHHHHHHHH
Confidence            88762 2211  1233 4444444543110  01345677777 56799998753    57899998  47899999999


Q ss_pred             HHHHHHH
Q 014769          406 GRMKAFC  412 (419)
Q Consensus       406 ~~l~~~~  412 (419)
                      ++|++++
T Consensus       394 ~~l~~~l  400 (401)
T TIGR01885       394 EIIKKVI  400 (401)
T ss_pred             HHHHHHh
Confidence            9999875

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>TIGR01814 kynureninase kynureninase

Probab=99.91  E-value=3.6e-21  Score=183.91  Aligned_cols=333  Identities=13%  Similarity=0.086  Sum_probs=209.4

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC---CC-CCCCCCCC---CHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---KF-NCYATNSG---IPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~-~~Y~~~~g---~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +.++.|+.+..+     +.++.+.+++.+.+...   .. ..+....+   ..+.++.+ +++      +.++++|++|+
T Consensus        26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~------g~~~~~v~~~~   93 (406)
T TIGR01814        26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLV------GAKEDEVVVMN   93 (406)
T ss_pred             CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-ccc------CCCCCcEEEeC
Confidence            567999977632     34778888887665421   10 11110011   11222223 343      56789999999


Q ss_pred             cHHHHHHHHHHHhcCCC---CeEEeeCCCCCCcHH----HHhhcCCEEE--EEeccCCCCcccChHHHHHhh---cCCcc
Q 014769          115 GCKQAVEVILSVLARPG---ANVLLPRPGWPYYEG----IAQRKQVEVR--HFDLLPERNWEVDLDAVEALA---DKNTA  182 (419)
Q Consensus       115 g~~~al~~~~~~l~~~g---d~vlv~~p~~~~~~~----~~~~~g~~~~--~~~~~~~~~~~~~~~~l~~~~---~~~~~  182 (419)
                      |+|++++.++.++.+++   +.|++.+..|+....    .++..|++++  ...+....++.++++.+++.+   .++++
T Consensus        94 ~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~  173 (406)
T TIGR01814        94 TLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIA  173 (406)
T ss_pred             CchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeE
Confidence            99999999999876654   367888889987332    3455677761  122222334567888888776   36788


Q ss_pred             EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCcee
Q 014769          183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRF  261 (419)
Q Consensus       183 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~  261 (419)
                      +|++++++|.||.++|   +++|.++|+++|+++++|++++.    |..+..+..++.   .+++.|.+|+++ .||   
T Consensus       174 lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~gv---D~~~~s~hK~l~g~pG---  240 (406)
T TIGR01814       174 VILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDWGV---DFACWCTYKYLNAGPG---  240 (406)
T ss_pred             EEEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccCCC---CEEEEcCccccCCCCC---
Confidence            9999999999999999   99999999999999999999997    322233333333   388889999853 344   


Q ss_pred             EEEEeeCCCCccchhhHHHH--------H--------HhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769          262 GWLVTNDPNGIFQKSGIIDS--------I--------KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI  325 (419)
Q Consensus       262 G~~~~~~~~~~~~~~~~~~~--------l--------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  325 (419)
                      |.+++..+......+.+...        +        +......++++.....++.++++.......++..++.+...++
T Consensus       241 ~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~  320 (406)
T TIGR01814       241 AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDY  320 (406)
T ss_pred             eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            33333221100000000000        0        0000012456667777777777654344567778888888888


Q ss_pred             HHHHhhcC----CCCCCCCCCC----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-
Q 014769          326 CYDGVKEI----PCISCPNKPE----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-  395 (419)
Q Consensus       326 l~~~l~~~----~~~~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-  395 (419)
                      +.+.|+++    +++.++ .|.    .+..+.+.++ .      +..++...| .++||.+...    ..+.+|+|+ . 
T Consensus       321 l~~~l~~~~~~~~~~~i~-~~~~~~~r~~~v~~~~~-~------~~~~~~~~L-~~~gi~v~~~----~~~~iRiS~~~~  387 (406)
T TIGR01814       321 LEELIKARCGGPPVLTII-TPRDHAQRGCQLSLTHP-V------PGKAVFQAL-IKRGVIGDKR----EPSVIRVAPVPL  387 (406)
T ss_pred             HHHHHHhhcCCCCceEEe-CCCChhhcCCeEEEEec-C------CHHHHHHHH-HHCCEEEecc----CCCeEEEechhc
Confidence            98888764    345533 331    1234445554 1      356676666 5679987532    246899998 3 


Q ss_pred             -cCHHHHHHHHHHHHHHH
Q 014769          396 -AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       396 -~~~~~l~~~l~~l~~~~  412 (419)
                       +++++|+.+++.|++++
T Consensus       388 ~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       388 YNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             cCCHHHHHHHHHHHHHHh
Confidence             48899999999998764

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.90  E-value=7.1e-21  Score=179.00  Aligned_cols=302  Identities=18%  Similarity=0.195  Sum_probs=201.7

Q ss_pred             HHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCCCCCCc
Q 014769           66 DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPGWPYY  144 (419)
Q Consensus        66 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p~~~~~  144 (419)
                      +++.+.+....+   .......++++.+++++      +  .+++++++|+++++..++.++ ..+||+|+++.++|...
T Consensus         3 ~~~~~~~~~~~~---~~~~~~~~~~~~la~~~------~--~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~   71 (352)
T cd00616           3 EAVEEVLDSGWL---TLGPKVREFEKAFAEYL------G--VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT   71 (352)
T ss_pred             HHHHHHHHcCCc---cCCHHHHHHHHHHHHHh------C--CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence            445555655432   22335789999999998      2  357888889999999999998 58999999999999998


Q ss_pred             HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc
Q 014769          145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH  224 (419)
Q Consensus       145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  224 (419)
                      ...+...|.+++.+++++ .++.+|++.+++.++++++++++++   ++|...+   +++|.++|+++|+++|+|++|+.
T Consensus        72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~  144 (352)
T cd00616          72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL  144 (352)
T ss_pred             HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence            888899999999998754 3577899999999987888888764   6898887   88899999999999999999986


Q ss_pred             cccCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc--------------
Q 014769          225 LTFGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI--------------  288 (419)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~--------------  288 (419)
                      ......  ..+..+.    .+.+.|++  |.+  ++.+.|+++++++       ++.+.++.....              
T Consensus       145 g~~~~~--~~~~~~~----d~~~~S~~~~K~~--~~~~gg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (352)
T cd00616         145 GATYKG--RKVGTFG----DAGAFSFHPTKNL--TTGEGGAVVTNDE-------ELAERARLLRNHGRDRDRFKYEHEIL  209 (352)
T ss_pred             CCeECC--EEcccCc----ceeEEcCCCCCCC--cccCceEEEECCH-------HHHHHHHHHHHcCCCCCCCcccccee
Confidence            432110  0111111    25566766  875  4445688887642       355555433211              


Q ss_pred             --ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEEEEeecCcccccCCCC
Q 014769          289 --YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSMVTMVKLNPWLLEDIND  362 (419)
Q Consensus       289 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~~~~~~~~~~~~~  362 (419)
                        ....+..........     .+.+++..++.+++.+++.+.|.+++++..+..+.    ....+.+.++..   ...+
T Consensus       210 ~~~~~~~~~~aa~~~~~-----l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  281 (352)
T cd00616         210 GYNYRLSEIQAAIGLAQ-----LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---AGES  281 (352)
T ss_pred             eeccCcCHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---CCCC
Confidence              011122211111111     23456677778889999999999888887442222    123333444420   0124


Q ss_pred             HHHHHHHHHHhcCeEeecCCCCC----------------C-------CCeEEEEee--cCHHHHHHHHHHHH
Q 014769          363 DIEFALKLAKEESVIVTPGIYVG----------------L-------KNWLRIAFC--AEPSALKDGLGRMK  409 (419)
Q Consensus       363 ~~~~~~~ll~~~gv~v~~g~~~~----------------~-------~~~~Ris~~--~~~~~l~~~l~~l~  409 (419)
                      ..++...| .++||.+.......                .       .+.+|+++.  .++++++.+++.|+
T Consensus       282 ~~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         282 RDELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             HHHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence            66777666 66799664322110                0       257999994  68999999988773

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.90  E-value=6.2e-21  Score=183.13  Aligned_cols=351  Identities=17%  Similarity=0.089  Sum_probs=216.5

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|.-... .-.-+|.+.+++.+++.....  +....+..+.+..+++.+.+..+. ...+.++++++++
T Consensus        52 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGs  127 (443)
T PRK06058         52 DVDGNRLIDLGSGIAVTS-VGNSAPRVVEAVREQVARFTH--TCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGA  127 (443)
T ss_pred             eCCCCEEEEcCcchhhhc-cCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcH
Confidence            345888999988843221 123579999999999876322  222223346666677776654331 1125899999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCCCCc----cc--------C
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPERNW----EV--------D  169 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~----~~--------~  169 (419)
                      +|++.+++....  ..++|+...++|+++...+.....              .+..++.....+.    ..        .
T Consensus       128 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (443)
T PRK06058        128 EAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARA  207 (443)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHH
Confidence            999999985432  237899999999987644432211              1111111100000    00        1


Q ss_pred             hHHHHHhhcCCccEEEEeCCCCcc-ccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769          170 LDAVEALADKNTAAMVIINPGNPC-GNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL  247 (419)
Q Consensus       170 ~~~l~~~~~~~~~~v~i~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  247 (419)
                      ++.+++.+..+..+.+|..|-+.. |.. .+.+++++|.++|++||+++|.||++.++...|..+ ....++..+.++  
T Consensus       208 ~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv--  284 (443)
T PRK06058        208 ITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI--  284 (443)
T ss_pred             HHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE--
Confidence            222333333344566778885544 444 579999999999999999999999999886665432 122233333334  


Q ss_pred             ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEIC  326 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  326 (419)
                       +++|.++ .|+++|++++++        ++++.+.... ..+++.+++++.++.+.|+...++   +..++++++.+++
T Consensus       285 -~~gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l  351 (443)
T PRK06058        285 -TTAKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAALAAIETIEED---DLVARARQIEALM  351 (443)
T ss_pred             -EEccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHH
Confidence             4579975 799999999875        5666665432 346778999999998888753222   3344555556666


Q ss_pred             HHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecC
Q 014769          327 YDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAE  397 (419)
Q Consensus       327 ~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~  397 (419)
                      .+.|++    .+.+..+ ... |.++.+.+..... ...+   ...+...+ .++||.+.|+..+  .+++|+.+  ..+
T Consensus       352 ~~~L~~l~~~~~~i~~v-rg~-G~~~~i~~~~~~~-~~~~~~~~~~l~~~~-~~~Gv~~~~~~~~--~~~lr~~Ppl~~t  425 (443)
T PRK06058        352 TDRLRALAAEDDRIGDV-RGR-GAMIAIELVKPGT-TEPDAELTKALAAAA-HAAGVIVLTCGTY--GNVIRLLPPLVIG  425 (443)
T ss_pred             HHHHHHHHhhCCcEEee-ecc-ceEEEEEEecCCC-CCCcHHHHHHHHHHH-HHCCeEEeccCCC--CCEEEEECCCccC
Confidence            666654    2222212 344 4444454522100 0001   12344444 5689999887554  36899986  579


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 014769          398 PSALKDGLGRMKAFCQR  414 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~~~  414 (419)
                      +++|++++++|++++++
T Consensus       426 ~~~i~~~~~~l~~~l~~  442 (443)
T PRK06058        426 DELLREGLDVLEAALAD  442 (443)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999999875

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.90  E-value=5.5e-21  Score=183.60  Aligned_cols=355  Identities=15%  Similarity=0.067  Sum_probs=215.4

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|..... .-.-+|.+.+++.++++.........  -..+....+++.+.+..  +-..+.++++++++
T Consensus        39 d~dG~~ylD~~~g~~~~~-lGh~~p~v~~a~~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~--~~~~~~v~f~~SGs  113 (433)
T PRK08117         39 GVDGKEYLDFTSGIAVAN-VGHRHPKVVQAIKEQADKLMHGPSGV--IYYESILKLAEELAEIT--PGGLDCFFFSNSGA  113 (433)
T ss_pred             eCCCCEEEECCcchhhcc-CCCCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhC--CCCCCEEEEeCcHH
Confidence            345889999998843221 12367899999999987532211110  11233444444444322  22346899999999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCCC--Ccc--------cChH
Q 014769          118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPER--NWE--------VDLD  171 (419)
Q Consensus       118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~--~~~--------~~~~  171 (419)
                      +|++.+++.... .| .+|+..+.+|++..........              .+..++.....  .+.        -+++
T Consensus       114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (433)
T PRK08117        114 EAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLR  193 (433)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHH
Confidence            999999987432 23 6788888889876443321110              01122211000  000        1345


Q ss_pred             HHHHhhc----CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          172 AVEALAD----KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       172 ~l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      .+++.++    .+..+.+++.| ....|.+ .+.++++++.++|++||+++|+||+|.++...|.... ...++...   
T Consensus       194 ~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~p---  269 (433)
T PRK08117        194 DLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVVP---  269 (433)
T ss_pred             HHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCCC---
Confidence            5555543    23455666777 4555664 6899999999999999999999999998766664322 12222221   


Q ss_pred             EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769          246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE  324 (419)
Q Consensus       246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  324 (419)
                      .+.++||.++ +|+++|++++++        ++++.+.... ..+++.+++++.++.+.|+....+   ...++++++.+
T Consensus       270 Di~t~sK~lg-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~  337 (433)
T PRK08117        270 DIMTIAKGIA-SGLPLSAVVASK--------ELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEE---KLLDNANEMGA  337 (433)
T ss_pred             CEeehhhhcc-CCCcceeEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHH
Confidence            2358999976 799999999865        5666664332 334567888888888888753222   23334444455


Q ss_pred             HHHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCH
Q 014769          325 ICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEP  398 (419)
Q Consensus       325 ~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~  398 (419)
                      ++.+.|++    ++ +. ...+..|.++++.+..............+.+.+.++||.+.+...  ..+++|+++  ..++
T Consensus       338 ~l~~~L~~l~~~~~-~~-~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~  413 (433)
T PRK08117        338 YALERLEVLKEKHP-VI-GDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTK  413 (433)
T ss_pred             HHHHHHHHHHhcCC-ce-eeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCH
Confidence            55555543    32 21 224455677777774321000001123333444678998876422  247899996  5799


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 014769          399 SALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       399 ~~l~~~l~~l~~~~~~~~~  417 (419)
                      ++|++++++|.++++++.+
T Consensus       414 ~~i~~~~~~l~~~l~~~~~  432 (433)
T PRK08117        414 EEIDEGLDILDEALTEYEA  432 (433)
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            9999999999999988754

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.90  E-value=6.3e-21  Score=180.05  Aligned_cols=214  Identities=16%  Similarity=0.148  Sum_probs=150.4

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~  160 (419)
                      -..++++.++++.      +.+ +.++ +++|+.++..++. +.++||+|++++|.|.+..    ..+...|+++..++.
T Consensus        55 ~~~~le~~lA~l~------g~~-~~v~-~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~  125 (390)
T PRK08064         55 TREALEDIIAELE------GGT-KGFA-FASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM  125 (390)
T ss_pred             hHHHHHHHHHHHh------CCC-CeEE-ECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence            4578999999987      333 3444 4555778888886 6689999999999998533    445668998888865


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|......    .++ .++ 
T Consensus       126 -------~d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~g-  189 (390)
T PRK08064        126 -------TNLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DLG-  189 (390)
T ss_pred             -------CCHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----Cch-hhC-
Confidence                   2688999999888999999999999999998   889999999999999999999764321    112 223 


Q ss_pred             CCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL  319 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  319 (419)
                        ..+++.|++|.++.+ |...|++++.++       ++++.++...... +.....+.+.. ++..  ...+..+.++.
T Consensus       190 --~Divv~S~tK~~~G~~~~laG~~v~~~~-------~~~~~l~~~~~~~-g~~~~~~~a~l-~~~g--l~tl~~R~~~~  256 (390)
T PRK08064        190 --ADVVLHSATKFLAGHSDVLAGLAVVKDE-------ELAQKLYFLQNSF-GAVLGVQDCWL-VLRG--LKTLHVRLEHS  256 (390)
T ss_pred             --CcEEEeecceeccCCccceeEEEEeCCH-------HHHHHHHHHHHhc-CCCCCHHHHHH-HHcc--cCcHHHHHHHH
Confidence              248899999997643 456787776542       4677777665422 22222222221 2222  23355666677


Q ss_pred             HHHHHHHHHHhhcCCCC
Q 014769          320 RESAEICYDGVKEIPCI  336 (419)
Q Consensus       320 ~~~~~~l~~~l~~~~~~  336 (419)
                      .++...+.+.|+++|.+
T Consensus       257 ~~~a~~la~~L~~~~~v  273 (390)
T PRK08064        257 SETANKIALYLQEHPKV  273 (390)
T ss_pred             HHHHHHHHHHHhcCCCc
Confidence            77888888888876544

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.90  E-value=3e-21  Score=170.42  Aligned_cols=327  Identities=15%  Similarity=0.176  Sum_probs=213.5

Q ss_pred             eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHH
Q 014769           45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVIL  124 (419)
Q Consensus        45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~  124 (419)
                      ++|...+     .-.+.|+++++|.++-..+. ..|+..+-..++.+.+++.+      +  ...++|++++|.++..++
T Consensus         2 ~~f~SDn-----~~g~~~~m~eam~~a~~~~~-~~YG~D~~~~~~e~~~ae~~------g--~~a~~Fv~sGT~aN~lal   67 (342)
T COG2008           2 IDFRSDN-----VAGPTPEMREALAAANAVGD-DVYGEDPTTNALEQRIAELF------G--KEAALFVPSGTQANQLAL   67 (342)
T ss_pred             CccccCc-----cCCCCHHHHHHHHhccccCC-CCCCCCHHHHHHHHHHHHHh------C--CceEEEecCccHHHHHHH
Confidence            4566554     23568999999987753332 37888777777888888776      2  278999999999999999


Q ss_pred             HHhcCCCCeEEeeCCCCCCcHH--HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccC
Q 014769          125 SVLARPGANVLLPRPGWPYYEG--IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNV  196 (419)
Q Consensus       125 ~~l~~~gd~vlv~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~  196 (419)
                      .++++||+.|++..-.|.....  ..+..+ ....++..+..+..+++|+++..+.+      .++.+++.+.+|..|++
T Consensus        68 ~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV  146 (342)
T COG2008          68 AAHCQPGESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV  146 (342)
T ss_pred             HHhcCCCCeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence            9999999999999887764321  223333 23344555666778999999997763      34556666666678999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      +|.++|++|.++|+++|+.|+.|.+--....-... ++...+..... .+..++||..+.+   +|.++.-+.       
T Consensus       147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D-~v~~~~tK~g~~~---~gAiv~gn~-------  214 (342)
T COG2008         147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALG-VALKTIKSYVD-SVSFCLTKGGGAP---VGAIVFGNR-------  214 (342)
T ss_pred             cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC-CCHHHHHhhCC-EEEEecccCCcce---eeeEEEcCH-------
Confidence            99999999999999999999999875432111111 22223322222 4444789995444   588877663       


Q ss_pred             hHHHHHHhhhccc-cCCch--HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769          277 GIIDSIKDCLSIY-SDIPT--FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN  353 (419)
Q Consensus       277 ~~~~~l~~~~~~~-~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~  353 (419)
                      ++++.++.++... ...+.  +...+...+|++   +.......+-.+....|.+.|...||+... .|...+.++++++
T Consensus       215 ~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~~~-~~~~tN~vf~~l~  290 (342)
T COG2008         215 DFAKRARRWRKRAGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVKLA-FPVETNMVFVRLP  290 (342)
T ss_pred             HHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCceec-cCCcccEEEEECC
Confidence            5777777665322 22222  222233334443   323333344445588889999877798844 6667888889887


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                      ....    +...+... +.+.|+...+++     ..+|+.+  .++++++++++..++.++
T Consensus       291 ~~~i----~~l~~~~~-~~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         291 ESAI----EALRLAGA-LFYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             hHHH----HHHHhhch-hheeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence            5311    11122222 234455554432     3688888  478999999999988764

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.90  E-value=2.9e-20  Score=175.43  Aligned_cols=310  Identities=18%  Similarity=0.254  Sum_probs=198.5

Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCCC
Q 014769           62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPG  140 (419)
Q Consensus        62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p~  140 (419)
                      +.-.+++.+.+..+..  |+.    ..+++++.+++.+..|    .+++++++|+++|+..++.++ .++||+|+++.|+
T Consensus        11 ~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t   80 (375)
T PRK11706         11 GTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT   80 (375)
T ss_pred             HHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence            3446677777766533  322    2455666665555433    468999999999999987766 6899999999999


Q ss_pred             CCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769          141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE  220 (419)
Q Consensus       141 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  220 (419)
                      |..+...+...|++++.++++++ ++.+|++++++++++++++|++++   ++|...+   +++|.++|+++|+++|+|+
T Consensus        81 ~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~---~~~i~~la~~~~i~vIeD~  153 (375)
T PRK11706         81 FVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPVH---YAGVACE---MDTIMALAKKHNLFVVEDA  153 (375)
T ss_pred             cHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCCCCeEEEEeC---CCCCccC---HHHHHHHHHHcCCEEEEEC
Confidence            99999999999999999998654 477999999999988888888764   6898877   7899999999999999999


Q ss_pred             cccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc---------
Q 014769          221 VYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI---------  288 (419)
Q Consensus       221 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~---------  288 (419)
                      +|+.+. +++..   +..++.    +.+.||+  |.+ .+|.+.++++.+.        ++.++++.....         
T Consensus       154 a~a~g~~~~~~~---~g~~~~----~~~~Sf~~~K~l-~~g~gG~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~  217 (375)
T PRK11706        154 AQGVMSTYKGRA---LGTIGH----IGCFSFHETKNY-TAGEGGALLINDP--------ALIERAEIIREKGTNRSQFFR  217 (375)
T ss_pred             ccccccccCCee---eecCcC----EEEEeCCCCccc-cccCCeEEEECCH--------HHHHHHHHHHHcCCCcchhhc
Confidence            999865 33322   222221    3444555  986 4577766665432        455555443321         


Q ss_pred             ---------ccCCchHHHHHHHH-HHcccchHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCC----ceEEEEee
Q 014769          289 ---------YSDIPTFIQGAIPQ-ILEKTKEDFFCKLIDTLRESAEICYDGVKEIP--C-ISCPNKPE----GSMVTMVK  351 (419)
Q Consensus       289 ---------~~~~~~~~~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~----~g~~~~~~  351 (419)
                               ..+.+.......++ .+.+  -+.+++..++-+++.+.+.+.|..++  + +.....|.    ...++++.
T Consensus       218 ~~~~~~~~~~~g~~~~~~~~~aa~~~~q--l~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (375)
T PRK11706        218 GQVDKYTWVDIGSSYLPSELQAAYLWAQ--LEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIK  295 (375)
T ss_pred             cCCCcceeeecccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEE
Confidence                     01222221111111 1221  23456666666677777777777664  2 32111122    23355666


Q ss_pred             cCcccccCCCCHHHHHHHHHHhcCeEeecCCCC----------C-----C-------CCeEEEEee--cCHHHHHHHHHH
Q 014769          352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYV----------G-----L-------KNWLRIAFC--AEPSALKDGLGR  407 (419)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------~-----~-------~~~~Ris~~--~~~~~l~~~l~~  407 (419)
                      ++..     .+..++...| .++||.+.+....          +     .       ...+-|.+.  .++++++..++.
T Consensus       296 ~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~  369 (375)
T PRK11706        296 LRDL-----EDRSALINFL-KEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDT  369 (375)
T ss_pred             ECCc-----CCHHHHHHHH-HHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHH
Confidence            6531     2456666666 6679986533100          0     0       234555553  578999999999


Q ss_pred             HHHHH
Q 014769          408 MKAFC  412 (419)
Q Consensus       408 l~~~~  412 (419)
                      |++++
T Consensus       370 i~~~~  374 (375)
T PRK11706        370 ILEFF  374 (375)
T ss_pred             HHHHh
Confidence            88764

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.90  E-value=3.9e-21  Score=180.47  Aligned_cols=226  Identities=15%  Similarity=0.162  Sum_probs=156.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g  152 (419)
                      +.+|+.+ ...+|++.++++.      +.  +..++++++++++..++ .++++||+|++++|+|.+...    .+...|
T Consensus        44 y~r~~~p-~~~~Le~~lA~l~------g~--~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G  113 (377)
T PRK07671         44 YSRTGNP-TRAALEELIAVLE------GG--HAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFG  113 (377)
T ss_pred             cCCCCCh-HHHHHHHHHHHHh------CC--CceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCC
Confidence            3344443 4678999999987      32  23455555677887765 567899999999999984332    334568


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      ++++.++.       .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|....+. .  
T Consensus       114 ~~v~~v~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~-~--  180 (377)
T PRK07671        114 IEHTFVDT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ-S--  180 (377)
T ss_pred             eEEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC-C--
Confidence            88877753       3789999999889999999999999999988   889999999999999999999753322 1  


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhccc-cCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~  310 (419)
                       ++ .++.   .+++.|+||.++.++ .-.|++++.++       ++.+.++...... ...++...+.   ++..  .+
T Consensus       181 -p~-~~g~---Divv~S~sK~l~G~~~~~~G~~v~~~~-------~l~~~~~~~~~~~g~~~~~~~a~l---~~~~--l~  243 (377)
T PRK07671        181 -PI-SLGA---DIVLHSATKYLGGHSDVVAGLVVVNSP-------ELAEDLHFVQNSTGGILGPQDSWL---LLRG--LK  243 (377)
T ss_pred             -hh-hhCC---eEEEecCcccccCCccceeEEEEeCcH-------HHHHHHHHHHHhhcCCCCHHHHHH---HHcC--cC
Confidence             12 2222   488999999987554 34566766542       4666666555432 2334333332   2222  23


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      .+..+.++..++...+.+.|++.|++..+..|
T Consensus       244 tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p  275 (377)
T PRK07671        244 TLGIRMEEHETNSRAIAEFLNNHPAVNKVYYP  275 (377)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence            36667777888899999999887665433333

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.90  E-value=1.8e-20  Score=173.93  Aligned_cols=353  Identities=16%  Similarity=0.086  Sum_probs=225.3

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|..... .-..+|.+.+++.+++.......+...  ..+....+++.|...... ...+.++++++++
T Consensus        52 DvdG~~ylDf~sgi~v~~-~GH~hP~Vv~Av~~q~~~~~h~~~~~~--~~e~~v~~ae~L~~~~p~-~~~~~~~f~~sGa  127 (447)
T COG0160          52 DVDGNEYLDFLSGIAVLN-LGHNHPRVVEAVKRQLAKLNHTHTRDL--YYEPYVELAEKLTALAPG-SGLKKVFFGNSGA  127 (447)
T ss_pred             eCCCCEEEEcccCcchhc-cCCCCHHHHHHHHHHHHHhhcccCCcc--cchhHHHHHHHHHHhCCc-ccCCeEEecCCcH
Confidence            346899999999744432 224689999999999876432222221  124444555555442221 1467899999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcC--------------CEEEEEeccCC--CCcc--------cChH
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQ--------------VEVRHFDLLPE--RNWE--------VDLD  171 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~--~~~~--------~~~~  171 (419)
                      +|++.+++....  ....|+.....|++.......+.              ..+..+|.+..  ..+.        ...+
T Consensus       128 eA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~  207 (447)
T COG0160         128 EAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALE  207 (447)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHH
Confidence            999999988643  34789999999987543322221              11333433211  1111        1233


Q ss_pred             HHHHhhc-----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769          172 AVEALAD-----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV  244 (419)
Q Consensus       172 ~l~~~~~-----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  244 (419)
                      .+++.+.     ....+.+|..| +...|. +.|.++++++.++|++||+++|+||++.++..+| ....+..++..+.+
T Consensus       208 ~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDi  286 (447)
T COG0160         208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDI  286 (447)
T ss_pred             HHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCE
Confidence            3444332     13345566666 676776 5799999999999999999999999999998888 44455555544444


Q ss_pred             EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE  324 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  324 (419)
                      +   ++||.++. |+++|.++.+.        ++.+........++..|+++.+++.+.|+....+   .+.++..+.-+
T Consensus       287 v---t~aK~ig~-G~Pl~avv~r~--------ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~  351 (447)
T COG0160         287 V---TLAKSLGG-GLPLSAVVGRA--------EIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEE---NLLERAAELGE  351 (447)
T ss_pred             E---EecccccC-CCceeEEeccH--------HhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHH
Confidence            5   67899655 99999999876        4555222333456888999999998888864333   34444555555


Q ss_pred             HHHHHhhc----CCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--e
Q 014769          325 ICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--C  395 (419)
Q Consensus       325 ~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~  395 (419)
                      ++++.|.+    .|.+-  ..-.-|.++-+.+-....   +.......++.++ .++|+.+..+..+  .+.+||.+  .
T Consensus       352 ~l~~~L~~l~~~~~~Ig--dVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~-~~~Glil~~~G~~--~nviRi~PPL~  426 (447)
T COG0160         352 YLRDRLEELQEKHPLIG--DVRGLGLMIGVELVKDRDTKEPDAELAAKIVARA-FERGLLLLTCGPH--GNVLRILPPLT  426 (447)
T ss_pred             HHHHHHHHHHhhcCcee--cccccceEEEEEEecCCCCCCCCHHHHHHHHHHH-HHcCCEEeccCCC--CcEEEEeCCcc
Confidence            55555543    34222  122347777777753211   0001123455555 5679988776543  57899998  5


Q ss_pred             cCHHHHHHHHHHHHHHHHHH
Q 014769          396 AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       396 ~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .++++++++++.|.+++++.
T Consensus       427 is~e~~d~~l~il~~al~~~  446 (447)
T COG0160         427 ISDEELDEGLDILEEALKEA  446 (447)
T ss_pred             cCHHHHHHHHHHHHHHHHhh
Confidence            69999999999999999864

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.90  E-value=1.5e-20  Score=179.03  Aligned_cols=354  Identities=15%  Similarity=0.106  Sum_probs=215.8

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.++||..|..+.. .-.-+|.+.+++.+++.....  +.......+.+..+++.+.+..+.+ ..+.++++++
T Consensus        34 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~S  109 (425)
T PRK07495         34 IWDKEGRRYIDFAAGIAVVN-TGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTT  109 (425)
T ss_pred             EEeCCCCEEEEccccHHhhc-cCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCc
Confidence            44456899999988843321 123678999999999876432  1111111234444555554422211 1268999999


Q ss_pred             HHHHHHHHHHHhcC-C-CCeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCCcccC----hHHHHH
Q 014769          116 CKQAVEVILSVLAR-P-GANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERNWEVD----LDAVEA  175 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~-gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~~----~~~l~~  175 (419)
                      +++|++.+++.... . ..+|+....+|++........ +.             .+..++.+... .+.+    ++.+++
T Consensus       110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~  188 (425)
T PRK07495        110 GAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDK  188 (425)
T ss_pred             hHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHH
Confidence            99999999987643 2 367899999998864333221 10             12223321111 1122    344455


Q ss_pred             hhc----CCccEEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEec
Q 014769          176 LAD----KNTAAMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS  249 (419)
Q Consensus       176 ~~~----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  249 (419)
                      .+.    .+..+.+++.| ..-+| ..+|.+++++|.++|++||+++|+||+|.++...|..+ ....++.   ...+.+
T Consensus       189 ~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~-a~~~~gv---~pDi~t  264 (425)
T PRK07495        189 LFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AMEHHEV---AADLTT  264 (425)
T ss_pred             HHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-eecccCC---CCCEEe
Confidence            543    23345566667 32377 45899999999999999999999999999876665431 2222222   234568


Q ss_pred             CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      +||.+ .+|+++|++++++        ++++.+... ...+++.+++.+.++.++++....+.   ..++++++.+++.+
T Consensus       265 lsK~l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~  332 (425)
T PRK07495        265 MAKGL-AGGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQ  332 (425)
T ss_pred             ehhhh-cCCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHH
Confidence            99996 4789999999975        566665443 23456778888887777766532222   22333344444444


Q ss_pred             Hhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHH
Q 014769          329 GVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPS  399 (419)
Q Consensus       329 ~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~  399 (419)
                      .|++    +|.+..+  -..|+++|+.+.+... ...+   ...+...+ .++|+++.+....  .+.+|+.+  ..+++
T Consensus       333 ~L~~l~~~~~~i~~v--rG~Gl~~~iel~~~~~-~~~~~~~~~~~~~~~-~~~Gvl~~~~g~~--~~~~r~~Ppl~it~~  406 (425)
T PRK07495        333 RLASLRETVPEIADI--RGPGFMNAVEFNDADS-GLPSAEFANRVRLKA-LEKGLILLTCGVH--GNVIRFLAPITIQDD  406 (425)
T ss_pred             HHHHHHhhCCCeeee--ecCceEEEEEEecCCC-CCccHHHHHHHHHHH-HHCCeEEeecCCC--CCEEEEeCCCccCHH
Confidence            4432    3433212  2348999998853211 0011   12344444 5689998764221  47899997  46999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 014769          400 ALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~~~  416 (419)
                      ++++++++|++++++..
T Consensus       407 ~id~~~~~l~~~l~~~~  423 (425)
T PRK07495        407 VFAEALDILEASILEAS  423 (425)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999998764

>PLN02509 cystathionine beta-lyase

Probab=99.89  E-value=8.4e-21  Score=180.64  Aligned_cols=228  Identities=18%  Similarity=0.183  Sum_probs=157.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCC
Q 014769           78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQV  153 (419)
Q Consensus        78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~  153 (419)
                      ..|... |.+ .++++.+.+.+..    ..+++++++|+++++..++ .+.++||+|+++.|.|.++.    ..+...|+
T Consensus       125 ~~Y~r~-gnp-t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~  197 (464)
T PLN02509        125 YDYTRS-GNP-TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV  197 (464)
T ss_pred             CccCCC-CCH-HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence            357764 554 5666666665533    3456777788899987666 56789999999999999875    33456788


Q ss_pred             EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769          154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT  233 (419)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  233 (419)
                      .+..++.       .|++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|......    .
T Consensus       198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~~----~  263 (464)
T PLN02509        198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVLS----R  263 (464)
T ss_pred             EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccccccC----C
Confidence            8777642       3688999999888999999999999999765   999999999999999999998754321    1


Q ss_pred             CccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHH
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDF  311 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~  311 (419)
                      ++ ..+.   .+++.|++|.++.+| .-.|+++++++       .+.+.++..... ....++...+.+...|     +.
T Consensus       264 pl-~~ga---Divv~S~tK~l~G~gdv~gG~v~~~~~-------~l~~~~~~~~~~~g~~l~p~~A~l~lr~L-----~t  327 (464)
T PLN02509        264 PL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGI-----KT  327 (464)
T ss_pred             hh-hcCC---cEEEecCcccccCCCccceeEEEeccH-------HHHHHHHHHHHhcCCCcCHHHHHHHHhhh-----hh
Confidence            12 2222   388999999976644 34677776542       234444433222 1223333333332222     44


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          312 FCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      +..+.++..++...+.+.|+++|.+..|..|
T Consensus       328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yP  358 (464)
T PLN02509        328 MALRIEKQQENARKIAMYLSSHPRVKKVYYA  358 (464)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            6777788888999999999988776544444

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.89  E-value=6.4e-21  Score=179.06  Aligned_cols=221  Identities=15%  Similarity=0.156  Sum_probs=149.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcC
Q 014769           77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQ  152 (419)
Q Consensus        77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g  152 (419)
                      +.+|+.+ -...|++.++++.      +  .+..+++++++.++..++. ++++||+|++++|.|.+..    ..+...|
T Consensus        44 y~r~~~p-~~~~Le~~la~l~------g--~~~al~~~SG~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~g  113 (380)
T PRK06176         44 YSRSGNP-TRFALEELIADLE------G--GVKGFAFASGLAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNG  113 (380)
T ss_pred             ccCCCCh-hHHHHHHHHHHHh------C--CCCEEEECCHHHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcC
Confidence            3344443 3678999999987      2  2344566666789987664 6689999999999997543    3455678


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  232 (419)
                      +++..++.       .|++.+++++++++++|++.+|+||||.+.+   +++|.++|+++|+++|+|++|+...+. .  
T Consensus       114 i~v~~vd~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~--  180 (380)
T PRK06176        114 LSCTIIDT-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N--  180 (380)
T ss_pred             eEEEEcCC-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--
Confidence            77776653       3789999999888999999999999999998   889999999999999999999864332 1  


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhccc-cCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~  310 (419)
                       ++ .++.+   +++.|++|.++.+| .-.|++++.++       ++.+.++...... ...++...+.+...+     .
T Consensus       181 -p~-~~gaD---ivv~S~tK~l~g~~d~~gG~vv~~~~-------~~~~~~~~~~~~~G~~~~~~~~~l~~~gl-----~  243 (380)
T PRK06176        181 -PL-LLGAD---IVVHSGTKYLGGHSDVVAGLVTTNNE-------ALAQEIAFFQNAIGGVLGPQDSWLLQRGI-----K  243 (380)
T ss_pred             -cc-ccCCC---EEEecCceeccCCccceeeEEEecHH-------HHHHHHHHHHHHhcCCCCHHHHHHHHhcc-----C
Confidence             22 22333   88899999987666 34566665432       4555555444322 222333323222222     2


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      .+..+.++..++...+.+.|++.|.+.
T Consensus       244 tl~~R~~~~~~~a~~la~~L~~~p~v~  270 (380)
T PRK06176        244 TLGLRMEAHQKNALCVAEFLEKHPKVE  270 (380)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence            244455555666777777777765543

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.89  E-value=2.2e-20  Score=177.59  Aligned_cols=157  Identities=17%  Similarity=0.188  Sum_probs=128.0

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  160 (419)
                      -..++++.+|++.      +  .+..++|+++++|++.++.++.++||+|+++...|.+....+    ...|+++++++.
T Consensus        65 ~~~~le~~lA~l~------g--~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~  136 (433)
T PRK08134         65 TVAVLEERVAALE------G--GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP  136 (433)
T ss_pred             HHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence            4678999999987      2  235788999999999999999999999999999998654433    457888888764


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      +       |++.+++++++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|.++.....    ..++ .++.
T Consensus       137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~Ga  201 (433)
T PRK08134        137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EHGA  201 (433)
T ss_pred             C-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hcCC
Confidence            2       789999999999999999999999999999   89999999999999999999875322    1222 3344


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      +   +++.|.+|.++.+|-.+|.+++.
T Consensus       202 D---~vv~S~tK~l~g~g~~~gG~v~~  225 (433)
T PRK08134        202 D---LVYHSATKFLGGHGTAIGGVLVD  225 (433)
T ss_pred             C---EEEeccccccCCCCCceEEEEEe
Confidence            3   88899999988888777777663

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.89  E-value=2.2e-20  Score=178.01  Aligned_cols=224  Identities=17%  Similarity=0.126  Sum_probs=156.3

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~  160 (419)
                      -...|++.++++.      +  .+..++++++++|+..++.+++++||+|+++.+.|.+..    ..+...|+.++.++.
T Consensus        64 ~~~~le~~lA~l~------g--~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  135 (427)
T PRK05994         64 TNAVLEERVAALE------G--GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA  135 (427)
T ss_pred             cHHHHHHHHHHHh------C--CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence            3567888999887      2  345888899999999999999999999999999998643    345677888887753


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|....    ...++ .++.
T Consensus       136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl-~~ga  200 (427)
T PRK05994        136 -------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPI-EHGA  200 (427)
T ss_pred             -------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCcc-ccCC
Confidence                   2788999999888999999999999999998   8899999999999999999997522    11222 2333


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc---------h--hh-----HH-----------HHHHhhhccccCCc
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ---------K--SG-----II-----------DSIKDCLSIYSDIP  293 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~---------~--~~-----~~-----------~~l~~~~~~~~~~~  293 (419)
                      +   +++.|++|.++.+|-.+|.+++......+.         .  +.     +.           ...+.........+
T Consensus       201 D---ivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  277 (427)
T PRK05994        201 D---IVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS  277 (427)
T ss_pred             c---EEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence            3   888999999887776677666532110000         0  00     11           11111222223334


Q ss_pred             hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769          294 TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP  339 (419)
Q Consensus       294 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  339 (419)
                      +...+.+..-|     +.+..+.++..++...+.+.|+++|.+..+
T Consensus       278 ~~~A~l~~~~l-----~tL~~r~~~~~~~a~~la~~L~~~p~v~~v  318 (427)
T PRK05994        278 PFNAFLILTGI-----ETLPLRMQRHSDNALAVAEWLKGHPKVSWV  318 (427)
T ss_pred             HHHHHHHHcCc-----ccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            43333322222     346666777788888899999887765433

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.89  E-value=8.9e-20  Score=171.72  Aligned_cols=356  Identities=10%  Similarity=0.039  Sum_probs=232.7

Q ss_pred             chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHH
Q 014769           22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIAD   95 (419)
Q Consensus        22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~   95 (419)
                      ...|..++++-.++     ..+.|+|--..      -..++.+.+++...+.+...      ..|+......+++....+
T Consensus        34 d~~~~~~~~~e~~r-----q~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~  102 (493)
T PRK13580         34 EPRIAEAIRQELAD-----QRSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAE  102 (493)
T ss_pred             CHHHHHHHHHHHHH-----HhcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHH
Confidence            45566666544332     34556665543      23567888887766654322      245555666778877777


Q ss_pred             HHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC-------------------------------CCeEEeeCCCCCCc
Q 014769           96 YLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP-------------------------------GANVLLPRPGWPYY  144 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~-------------------------------gd~vlv~~p~~~~~  144 (419)
                      ..++.+|.  +..+|-. .+++.|+..++.++++|                               ||+|+..++...++
T Consensus       103 ra~~lf~a--~~anvqp-~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGH  179 (493)
T PRK13580        103 HAKELFGA--EHAYVQP-HSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGH  179 (493)
T ss_pred             HHHHHhCC--CcccccC-CCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCe
Confidence            77776653  2234433 45677888888888876                               79999887776544


Q ss_pred             HH---HHhhcC--CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          145 EG---IAQRKQ--VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       145 ~~---~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      ..   .....+  .....++++++ ...+|.+++++.++++++.++++..+|-+ ...|   +++|.++|+++|+++++|
T Consensus       180 lthg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~-~~~d---l~~i~eia~~~gA~L~VD  254 (493)
T PRK13580        180 LTHGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAALAREFKPLILVAGYSAYP-RRVN---FAKLREIADEVGAVLMVD  254 (493)
T ss_pred             eecCcccchhhheeeeEecccCcc-cCccCHHHHHHHHhhcCCEEEEeCccccC-CCcC---HHHHHHHHHHcCCEEEEE
Confidence            21   111122  45566666543 34799999999999899999999888864 4667   899999999999999999


Q ss_pred             ccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHH
Q 014769          220 EVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQ  297 (419)
Q Consensus       220 e~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~  297 (419)
                      ++|....+++..... ....  ....++++|++|++  .|.+.|+++++.        ++++.+..... ..+++.++..
T Consensus       255 ~AH~~Gligg~~~~~~~~~~--~~~D~vtgT~hKaL--~GP~GG~I~~~~--------~l~~~L~~a~P~i~gg~l~p~i  322 (493)
T PRK13580        255 MAHFAGLVAGKVFTGDEDPV--PHADIVTTTTHKTL--RGPRGGLVLAKK--------EYADAVDKGCPLVLGGPLPHVM  322 (493)
T ss_pred             CchhhceeccccchhhcCCC--CCCcEEEeCChhhc--cCCCeEEEEecH--------HHHHHHhhCCCcccCCCccHHH
Confidence            999987765433210 0111  12238899999985  444569998865        57777754432 2334444444


Q ss_pred             HHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeE
Q 014769          298 GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVI  377 (419)
Q Consensus       298 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~  377 (419)
                      .+++..+.+.......+.++++.++.+.+.+.|.+. |+..+........+++.+.+..     .....+.+.|.+.||.
T Consensus       323 AA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~-----~~g~~a~~~L~e~GI~  396 (493)
T PRK13580        323 AAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG-----LTGRQAESALLDAGIV  396 (493)
T ss_pred             HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH-----HHHHHHHHHHHHCCeE
Confidence            444444444222233567889999999999999987 7774322234566677775321     1233455566889999


Q ss_pred             eecCCCCCC------CCeEEEEeec------CHHHHHHHHHHHHHHHHH
Q 014769          378 VTPGIYVGL------KNWLRIAFCA------EPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       378 v~~g~~~~~------~~~~Ris~~~------~~~~l~~~l~~l~~~~~~  414 (419)
                      +.+-..+..      ...|||++..      ++++++++++.|.++++.
T Consensus       397 vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~  445 (493)
T PRK13580        397 TNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN  445 (493)
T ss_pred             EccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence            976554443      4679999832      579999999999988864

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=1.2e-20  Score=176.14  Aligned_cols=203  Identities=18%  Similarity=0.120  Sum_probs=143.5

Q ss_pred             cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      ..++++++++|+..++.+++++||+|++++|.|+++..    .++..|+++..++..       +.+.+++++++++++|
T Consensus        81 ~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~~TklV  153 (395)
T PRK05967         81 GTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRPNTKVV  153 (395)
T ss_pred             CEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCcCceEE
Confidence            34555558999999999999999999999999998754    457788888877421       3477999998899999


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC-CceeEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-GWRFGW  263 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~  263 (419)
                      ++.+|+||++.+.+   +++|+++|+++|+++|+|++|....+.    .++ .++.+   +++.|++|.++.. +.-.|+
T Consensus       154 ~lesPsNP~l~v~d---l~~I~~la~~~g~~vvVD~t~a~p~~~----~pl-~~GaD---ivv~S~tKy~~Gh~d~~~G~  222 (395)
T PRK05967        154 HTEAPGSNTFEMQD---IPAIAEAAHRHGAIVMMDNTWATPLYF----RPL-DFGVD---ISIHAATKYPSGHSDILLGT  222 (395)
T ss_pred             EEECCCCCCCcHHH---HHHHHHHHHHhCCEEEEECCccCceec----Chh-HcCCC---EEEEecccccCCCCCeeEEE
Confidence            99999999876655   999999999999999999999863221    122 23444   8999999985543 366776


Q ss_pred             EEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ++.+.        +..+.+.... ......++...+.   ++..  -+-+.-+.++..++...+.+.|+++|.+..|..|
T Consensus       223 v~~~~--------~~~~~l~~~~~~~G~~~~p~da~l---~~rg--l~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yP  289 (395)
T PRK05967        223 VSANE--------KCWPQLLEAHGTLGLCAGPDDTYQ---ILRG--LRTMGIRLEHHRKSALEIARWLEGRPDVARVLHP  289 (395)
T ss_pred             EEcCH--------HHHHHHHHHHHHcCCCCCHHHHHH---HHcC--cccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECC
Confidence            65532        3444454332 2233344444333   3332  2335566667778888889999888766544444

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.89  E-value=2.4e-20  Score=178.63  Aligned_cols=352  Identities=16%  Similarity=0.103  Sum_probs=214.3

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.++||..|..+.. .-.-+|.+.+++.+++.......+..  -..+.+..+++.+.+..+  ...+.++++++
T Consensus        36 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~~la~~l~~~~p--~~~~~v~f~~s  110 (423)
T PRK05964         36 LYLADGRELIDAISSWWVAT-HGHNHPYIDQAIREQLDRLDHVIFAG--FTHEPAERLAQRLVALTP--GGLDHVFFSDS  110 (423)
T ss_pred             EEeCCCCEEEEcchhHHhcc-CCCCCHHHHHHHHHHHhhCCCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCC
Confidence            44456999999988843321 12357999999999987643211110  112445556666554322  12468999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHH
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~  174 (419)
                      +++|++.+++....       +| .+|+....+|++....+......             +..++....+....+++.++
T Consensus       111 GseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~  190 (423)
T PRK05964        111 GSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALE  190 (423)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHH
Confidence            99999999987632       23 68999999998865433322111             11222211100011267777


Q ss_pred             HhhcC--CccEEEEeCC--CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEec
Q 014769          175 ALADK--NTAAMVIINP--GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS  249 (419)
Q Consensus       175 ~~~~~--~~~~v~i~~p--~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  249 (419)
                      +.+..  +..+.+++.|  ++.+|... +.+++++|.++|++||+++|+||++.++...|..+ ....++.... +  .+
T Consensus       191 ~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD-i--~~  266 (423)
T PRK05964        191 ALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD-I--MC  266 (423)
T ss_pred             HHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC-e--ee
Confidence            77742  2344555666  56677654 89999999999999999999999998876555322 1122222222 2  36


Q ss_pred             CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769          250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES  322 (419)
Q Consensus       250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  322 (419)
                      ++|.++.+++++|++++++        ++.+.+...       ...+++.++++..++.+.++....+   ...+++.++
T Consensus       267 ~~K~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~---~~~~~~~~~  335 (423)
T PRK05964        267 LSKGLTGGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDE---PVLERVAAL  335 (423)
T ss_pred             eehhhhcCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence            7899755558999988865        577766431       1223456788877777777642211   233455555


Q ss_pred             HHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHH
Q 014769          323 AEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPS  399 (419)
Q Consensus       323 ~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~  399 (419)
                      .+.+.+.|+++.....+. ...-|.++.+.+..... . .....+...+ .++||.+.+.     .+.+|+++.  .+++
T Consensus       336 g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~-----~~~lR~~p~l~~t~e  407 (423)
T PRK05964        336 SAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL-E-RDGPALRAFA-LERGVLLRPL-----GNTIYLMPPYIITAE  407 (423)
T ss_pred             HHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc-h-hHHHHHHHHH-HHCCeEEEec-----CCEEEEeCCcccCHH
Confidence            555555555432222111 12335565666643110 0 0134555555 5689999874     257999984  7999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 014769          400 ALKDGLGRMKAFCQRH  415 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~~  415 (419)
                      +|+++++.+++++.++
T Consensus       408 dId~~v~~l~~al~~~  423 (423)
T PRK05964        408 ELDRITDAIVEVADEL  423 (423)
T ss_pred             HHHHHHHHHHHHHhhC
Confidence            9999999999998763

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.89  E-value=2.1e-19  Score=171.19  Aligned_cols=351  Identities=13%  Similarity=0.026  Sum_probs=213.3

Q ss_pred             hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHH-hCCCC-C----CCCCCCCCHHHHH-
Q 014769           19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAV-RSGKF-N----CYATNSGIPPARR-   91 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~-~~~~~-~----~Y~~~~g~~~lr~-   91 (419)
                      +.....|..++++-..     ...+.++|-..+.      ..+|.+++++...+ ..... .    .|+..+...+|++ 
T Consensus        10 ~~~~~~~~~~~~~~~~-----~~~~~~~l~~sen------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~   78 (416)
T PRK13034         10 EEYDDEVFAAINKELE-----RQQDHLELIASEN------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEAL   78 (416)
T ss_pred             hhhCHHHHHHHHHHHH-----HHhcCeeeccccc------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHH
Confidence            4556677888774322     1346676665541      35899999988875 32111 0    1111233567777 


Q ss_pred             ---HHHHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc-HHHHhh--cCCEE--EEEeccC
Q 014769           92 ---AIADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY-EGIAQR--KQVEV--RHFDLLP  162 (419)
Q Consensus        92 ---~ia~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~-~~~~~~--~g~~~--~~~~~~~  162 (419)
                         .+++++    |    .+.. +++++|+.|+..++.+++++||+|+++..+|.+. ...+..  .+...  ..+++++
T Consensus        79 ~~~~la~l~----g----~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  150 (416)
T PRK13034         79 AIERAKQLF----G----CDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR  150 (416)
T ss_pred             HHHHHHHHh----C----CCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc
Confidence               777766    2    2345 4568889999999999999999999999998762 222221  12111  2333332


Q ss_pred             CCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          163 ERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       163 ~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                      . .+.+|++++++.+.. ++++|++..+.  +|...+   +.+|.++|+++|+++++|++|+...+.....  ...+.  
T Consensus       151 ~-~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~--~~~~~--  220 (416)
T PRK13034        151 L-TGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEH--PNPFP--  220 (416)
T ss_pred             c-cCCcCHHHHHHHHhhcCCeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCC--CCCCC--
Confidence            2 356899999888753 56666665554  466666   8888889999999999999998765532111  11111  


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc--cCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY--SDIPTFIQGAIPQILEKTKEDFFCKLIDTL  319 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  319 (419)
                      .-.++++|++|+++.+  ..|+++++++       ++...++.....+  .+..++...++...+.+.......+.++++
T Consensus       221 ~~Di~~~s~~K~l~g~--~GG~v~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l  291 (416)
T PRK13034        221 HAHVVTTTTHKTLRGP--RGGMILTNDE-------EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQV  291 (416)
T ss_pred             CceEEEEeCcccCCCC--CCeEEEECcH-------HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence            1348889999996333  2477777542       3444444432211  223333333333233321112234557889


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCC-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC------CCCCCCCeEEE
Q 014769          320 RESAEICYDGVKEIPCISCPNKP-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG------IYVGLKNWLRI  392 (419)
Q Consensus       320 ~~~~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g------~~~~~~~~~Ri  392 (419)
                      .++.+++++.|.++ |+.+. .+ ..+..+++.+....     .....+.+.|+++||.+.+.      .....+..+|+
T Consensus       292 ~~~a~~l~~~L~~~-G~~~~-~~~~~t~i~~v~~~~~~-----~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~  364 (416)
T PRK13034        292 IANAQALAEVLKER-GYDLV-SGGTDNHLLLVDLRPKG-----LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRI  364 (416)
T ss_pred             HHHHHHHHHHHHHc-CCEec-cCCCCCcEEEEEcCCCC-----CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEe
Confidence            99999999999887 77733 22 34555666665321     13333434457789999752      11223567999


Q ss_pred             Eee------cCHHHHHHHHHHHHHHHHH
Q 014769          393 AFC------AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       393 s~~------~~~~~l~~~l~~l~~~~~~  414 (419)
                      ++.      .++++++++++.|++++.+
T Consensus       365 ~~~~~t~~~~~~~di~~l~~~l~~~~~~  392 (416)
T PRK13034        365 GTPAGTTRGFGEAEFREIANWILDVLDD  392 (416)
T ss_pred             CcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence            972      3689999999999988763

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.88  E-value=1.2e-19  Score=173.54  Aligned_cols=352  Identities=14%  Similarity=0.116  Sum_probs=210.2

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEE-ccc
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYV-TLG  115 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~-t~g  115 (419)
                      ..+|+.+|||..|..... .-.-+|.+.+++.+++...... +. .....+.+..+++.+.+....+...+ .+++ +++
T Consensus        35 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~-~~-~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s  111 (425)
T PRK09264         35 DEDGKEYIDFFAGAGALN-YGHNNPVLKQALIDYLQRDGIT-HG-LDMHTTAKREFLETFEETILKPRGLDYKVQFTGPT  111 (425)
T ss_pred             eCCCCEeeecccchhhcc-CCCCCHHHHHHHHHHHHhcccc-cc-cccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence            446899999988854322 1236799999999988742110 11 01123445555555544211111122 5656 589


Q ss_pred             HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CC------------EEEEEeccCCCCc-ccChHHHHHhhcC
Q 014769          116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QV------------EVRHFDLLPERNW-EVDLDAVEALADK  179 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~~~~~l~~~~~~  179 (419)
                      +++|++.+++.... +| .+|+....+|++....+... +.            .+..+|....... .-|++.+++.+..
T Consensus       112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~  191 (425)
T PRK09264        112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED  191 (425)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence            99999999988643 23 67899999999865433222 10            1222222110000 0256677777642


Q ss_pred             -----CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          180 -----NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       180 -----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                           +..+.+|+.| ....|. +.|.+++++|.++|++||+++|+||++.++...|..+ ....++..+.++   +++|
T Consensus       192 ~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi~---t~~K  267 (425)
T PRK09264        192 SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDIV---TLSK  267 (425)
T ss_pred             ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCEE---Eecc
Confidence                 1244566666 555676 5799999999999999999999999999875555322 122222222333   6789


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHHHHHh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEK-TKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      .++..|+++|++++++        ++ ..+... ...+++.++++..++.++++. ...+   ...++++++.+.+.+.|
T Consensus       268 ~l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~---~l~~~~~~~g~~l~~~l  335 (425)
T PRK09264        268 SISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSDD---AFEKEVKAKGELVRERL  335 (425)
T ss_pred             ccCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHH
Confidence            9766699999999975        23 222221 222455666666666566632 1111   23344444445554444


Q ss_pred             hc----CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHH
Q 014769          331 KE----IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDG  404 (419)
Q Consensus       331 ~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~  404 (419)
                      ++    .|.+. ......|++.++.++..     .....+...+ .++||.+.++..+  ...+|+++.  .++++++++
T Consensus       336 ~~l~~~~~~~~-~~vrg~Gl~~~i~l~~~-----~~~~~l~~~~-~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~  406 (425)
T PRK09264        336 EEIAAKYPGLG-AEVRGRGMMQGIDFGDG-----ELAGKIAAEA-FENGLIIETSGPE--DEVVKLLPPLTIDEEELEEG  406 (425)
T ss_pred             HHHHHhCCCce-ecceecccEEEEEecCh-----HHHHHHHHHH-HHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHH
Confidence            33    33221 22345688888888632     1234555555 6679999875433  367888874  689999999


Q ss_pred             HHHHHHHHHHHhc
Q 014769          405 LGRMKAFCQRHTK  417 (419)
Q Consensus       405 l~~l~~~~~~~~~  417 (419)
                      +++|.+++++..+
T Consensus       407 ~~~l~~~l~~~~~  419 (425)
T PRK09264        407 LDILEEAVAEVLA  419 (425)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999987644

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.88  E-value=9.6e-20  Score=173.29  Aligned_cols=352  Identities=13%  Similarity=0.066  Sum_probs=206.7

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEE-ccc
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYV-TLG  115 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~-t~g  115 (419)
                      ..+|+.+|||..|.-+.. .-.-+|.+.+++.+++.....  ........+.+..+++.+.+....+.. .+.+++ +++
T Consensus        31 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~--~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s  107 (412)
T TIGR02407        31 DEDGKEYIDFFAGAGALN-YGHNNPKLKQALIDYLADDGI--IHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT  107 (412)
T ss_pred             eCCCCEEEEcccchhhcc-CCCCCHHHHHHHHHHHhhccc--eeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence            446889999988854322 123689999999999874211  111111234555566665442110111 124655 589


Q ss_pred             HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CC------------EEEEEeccCCCCc-ccChHHHHHhhcC
Q 014769          116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QV------------EVRHFDLLPERNW-EVDLDAVEALADK  179 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~~~~~l~~~~~~  179 (419)
                      +++|++.+++.... +| .+|+....+|++....+... +.            .+..+|....... .-+++.+++.+..
T Consensus       108 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~  187 (412)
T TIGR02407       108 GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED  187 (412)
T ss_pred             chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh
Confidence            99999999988653 23 67999999999875443322 11            1111221100000 0135667776642


Q ss_pred             -----CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          180 -----NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       180 -----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                           +..+.+++.| +++.|. ..|.+++++|.++|+++|+++|+||++.++...|..+. ...++..+.++   +++|
T Consensus       188 ~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a-~~~~~v~PDi~---~~~K  263 (412)
T TIGR02407       188 SSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFS-FEPAGIEPDIV---CLSK  263 (412)
T ss_pred             ccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHH-hcccCCCCCEE---Eech
Confidence                 1234455566 778888 68999999999999999999999999997755554321 11122222223   5789


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcc-cchHHHHHHHHHH-HHHHHHHHHH
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEK-TKEDFFCKLIDTL-RESAEICYDG  329 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~-~~~~~~l~~~  329 (419)
                      .++..|+|+|++++++        ++ +.+... ...+++.++++..++.+.++. .....+.++.+.+ ...++.+.+.
T Consensus       264 ~lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l  334 (412)
T TIGR02407       264 SISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRI  334 (412)
T ss_pred             hccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence            9543399999999975        22 322211 223456677765555555552 2222222222111 1122222222


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGR  407 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~  407 (419)
                      .+.++.+. ...+..|+++|+.++...     ....+...+ .++||.+.+...+  .+.+|+++  ..++++++++++.
T Consensus       335 ~~~~~~~~-~~vrg~Gl~~~l~l~~~~-----~~~~~~~~~-~~~Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~~~~  405 (412)
T TIGR02407       335 VAEYPELI-KQVRGRGLMQGIECGDGD-----LAGKIAKAA-FENGLIIETSGPN--DEVIKLLPPLTIDEETLQQGLDI  405 (412)
T ss_pred             HhhCCCce-EeeecceeEEEEEecChH-----HHHHHHHHH-HHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHHHHH
Confidence            22344332 334667899999996421     134555555 5679999875322  46799998  4689999999999


Q ss_pred             HHHHHHH
Q 014769          408 MKAFCQR  414 (419)
Q Consensus       408 l~~~~~~  414 (419)
                      |++++.+
T Consensus       406 l~~~l~~  412 (412)
T TIGR02407       406 LEQAVEE  412 (412)
T ss_pred             HHHHHhC
Confidence            9998863

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.88  E-value=3.2e-19  Score=169.04  Aligned_cols=309  Identities=18%  Similarity=0.164  Sum_probs=204.4

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP  139 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p  139 (419)
                      .+.-.+++.+.+..+.   |....+..++|+++++++.      .  ++.++++|+++|+..++.++ .++||+|+++.|
T Consensus         9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g------~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~   77 (380)
T TIGR03588         9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG------A--KYAVAFNSATSALHIACLALGVGPGDRVWTTPI   77 (380)
T ss_pred             CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC------C--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCc
Confidence            3445677778776643   3223457899999999983      2  35666778999999999998 789999999999


Q ss_pred             CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769          140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM  215 (419)
Q Consensus       140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~  215 (419)
                      +|..+...+...|++++.++++++ ++.+|++.+++.++    +++++|+++   |++|...+   +++|.++|+++|++
T Consensus        78 ~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~  150 (380)
T TIGR03588        78 TFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGLK  150 (380)
T ss_pred             chHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCCE
Confidence            999988888999999999998653 46799999999998    677877754   46888877   89999999999999


Q ss_pred             EEEcccccccc-cCCCCCCCccc--cCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-
Q 014769          216 VVADEVYGHLT-FGSIPYTPMGL--FGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-  289 (419)
Q Consensus       216 li~De~~~~~~-~~~~~~~~~~~--~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-  289 (419)
                      +|+|++|+... +.+..   +..  ++    .+.+.|++  |.++.  ...|++++.++       ++.+.++...... 
T Consensus       151 lI~D~a~a~g~~~~~~~---~g~~~~~----d~~~~S~~~~K~~~~--~~GG~v~~~~~-------~~~~~~~~~~~~g~  214 (380)
T TIGR03588       151 IIEDASHALGAEYGGKP---VGNCRYA----DATVFSFHPVKIITT--AEGGAVTTNDE-------ELAERMRLLRSHGI  214 (380)
T ss_pred             EEEECCCcccCccCCEe---CCCcccc----ceEEEecCCCCcccc--cCceEEEECCH-------HHHHHHHHHHHCCC
Confidence            99999998743 33322   222  22    26666776  77533  24677777552       4555554332110 


Q ss_pred             -------------------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          290 -------------------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       290 -------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                                               ...+.+........|     +.+++..++-+++.+++.+.|..++++.....+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~  289 (380)
T TIGR03588       215 TKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLG  289 (380)
T ss_pred             CCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCC
Confidence                                     000111111111112     23566677778888888899988876652322211


Q ss_pred             ---eE-EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC-----------CC----------CCeEEEEee--cC
Q 014769          345 ---SM-VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV-----------GL----------KNWLRIAFC--AE  397 (419)
Q Consensus       345 ---g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~----------~~~~Ris~~--~~  397 (419)
                         .+ ...+.++..   ...+..++...| +++||.+.+....           ..          ...+++.+.  .+
T Consensus       290 ~~~~~~~~~i~~~~~---~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~  365 (380)
T TIGR03588       290 SKSAWHLYPILLDQE---FGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT  365 (380)
T ss_pred             CEeEEEEEEEEECCc---CCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCC
Confidence               22 222334321   012456776666 7789987643211           00          256788773  58


Q ss_pred             HHHHHHHHHHHHHHH
Q 014769          398 PSALKDGLGRMKAFC  412 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~  412 (419)
                      +++++..++.|++++
T Consensus       366 ~~dv~~i~~~l~~~~  380 (380)
T TIGR03588       366 LEQQQRVVETLRKVL  380 (380)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            899999999998764

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=5.3e-20  Score=174.72  Aligned_cols=228  Identities=18%  Similarity=0.115  Sum_probs=155.2

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~  160 (419)
                      ....|++.++++.        +.+..+++++|++|+..++.+++++||.|++....|.+....    +...|++++.++ 
T Consensus        70 ~~~~Le~~lA~l~--------g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-  140 (436)
T PRK07812         70 TQDVVEQRIAALE--------GGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-  140 (436)
T ss_pred             hHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence            3568888888886        234578888889999999999999999999999888765432    344677666653 


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      ++     .|++.+++++++++++|++.+|+||+|.+.+   +++|.++|+++|+++|+|+++.....    ..++ .++.
T Consensus       141 d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~----~~pl-~~Ga  207 (436)
T PRK07812        141 DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL----IRPL-EHGA  207 (436)
T ss_pred             CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hcCC
Confidence            11     2889999999888999999999999999999   89999999999999999999874221    1222 2333


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc-----------------------hhhHHHHHHhh--hccccCCchH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ-----------------------KSGIIDSIKDC--LSIYSDIPTF  295 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------------------~~~~~~~l~~~--~~~~~~~~~~  295 (419)
                      +   +++.|++|.++..|--+|.+++.+...-+.                       .+.+....+..  .......++.
T Consensus       208 D---ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~  284 (436)
T PRK07812        208 D---IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPF  284 (436)
T ss_pred             C---EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHH
Confidence            3   778999999888877777777643210000                       00111111111  1222333443


Q ss_pred             HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       296 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ..+.+..-|     +-+..+.++..++...+.+.|+++|.+..+..|
T Consensus       285 ~a~l~~rgl-----~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yP  326 (436)
T PRK07812        285 NAFLIAQGL-----ETLSLRIERHVANAQRVAEFLEARDEVASVNYA  326 (436)
T ss_pred             HHHHHhcCc-----CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            333322222     336666777788888999999988776544444

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.88  E-value=2.1e-19  Score=169.93  Aligned_cols=340  Identities=11%  Similarity=0.057  Sum_probs=213.6

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||..|.....-. ..+|.+.+++.+++..... .+  .....+.+..+++.+.+..    ..+.+++++++++
T Consensus        33 ~dG~~~lD~~sg~~~~~lG-h~~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGse  104 (395)
T PRK03715         33 HNGKRYLDFIQGWAVNCLG-HCNPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAE  104 (395)
T ss_pred             CCCCEEEECCcChhhccCC-CCCHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHH
Confidence            4588999999874332212 2379999999999875322 11  1234578888899886532    2468999999999


Q ss_pred             HHHHHHHHhcC------CC-CeEEeeCCCCCCcHHHHhhc-CCEEE---EEeccCCCC--cccChHHHHHhhcCCccEEE
Q 014769          119 AVEVILSVLAR------PG-ANVLLPRPGWPYYEGIAQRK-QVEVR---HFDLLPERN--WEVDLDAVEALADKNTAAMV  185 (419)
Q Consensus       119 al~~~~~~l~~------~g-d~vlv~~p~~~~~~~~~~~~-g~~~~---~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~  185 (419)
                      |++.+++.+..      +| .+|+..+.+|++........ +....   +.+..+.-.  .-.|++.+++.+.+++.+|+
T Consensus       105 A~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi  184 (395)
T PRK03715        105 ANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVM  184 (395)
T ss_pred             HHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEE
Confidence            99999998752      23 67888999998764333222 22111   111111000  01367888888876555555


Q ss_pred             EeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          186 IINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       186 i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      +...++..|.. .|.+++++|.++|+++|+++|+||++.++...|..+. ...++..+. +  .+++|.++ .|+++|.+
T Consensus       185 ~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD-i--~t~gK~lg-~G~p~~av  259 (395)
T PRK03715        185 LEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD-I--MTLGKGIG-GGVPLAAL  259 (395)
T ss_pred             EeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc-e--eeehhhhh-CCcceEEE
Confidence            55446667775 4799999999999999999999999998655554321 112222222 2  37889965 57999999


Q ss_pred             EeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCC
Q 014769          265 VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI---PCISCPNK  341 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~  341 (419)
                      ++++        ++..........+++.++++..++.+.|+....   +...++++++.+++.+.|+++   .++..  .
T Consensus       260 ~~~~--------~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~--v  326 (395)
T PRK03715        260 LAKA--------EVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEG--E  326 (395)
T ss_pred             EEcc--------ccccccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCe--E
Confidence            8865        232111111222445677777777777765321   234455666666666666542   12331  2


Q ss_pred             CCceEEEEeecCcccccCCCCHHHHHHHHHHhc---CeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE---SVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       342 p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ..-|.++-+.+...      ....+. ..+.+.   ||.+.+..    .+.+|+++  ..++++|+++++.|+++++++
T Consensus       327 rG~Glm~~i~l~~~------~~~~~~-~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        327 RGEGLLRALLLGKD------IGPQIV-EKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             EcceeEEEEEecCc------hHHHHH-HHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            24466666666431      122332 222444   99986432    36899998  468999999999999999875

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.87  E-value=3.8e-19  Score=170.59  Aligned_cols=355  Identities=16%  Similarity=0.126  Sum_probs=210.7

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCc-EEEcc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD-VYVTL  114 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~t~  114 (419)
                      +...+|+.++||..|..... .-.-+|.+.+++.+++.........  .-..+.+..+++.+.+..+....... +++++
T Consensus        33 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~  109 (442)
T TIGR00709        33 VTDVEGKEYLDFLAGAGTLA-LGHNHPNMKQKILDYLQSGLPLHTL--DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGP  109 (442)
T ss_pred             EEeCCCCEEEEccccHhhhc-CCCCCHHHHHHHHHHHHhccCcccc--ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCC
Confidence            33456899999988853321 1235789999999998764321111  01134555566666553321111124 56679


Q ss_pred             cHHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCccc--------Ch-
Q 014769          115 GCKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEV--------DL-  170 (419)
Q Consensus       115 g~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------~~-  170 (419)
                      ++++|++.+++.... .| .+|+....+|++....+.....             .+..++..  .....        +. 
T Consensus       110 sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  187 (442)
T TIGR00709       110 SGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGGEAGSN  187 (442)
T ss_pred             CHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCchhHHH
Confidence            999999999987643 23 6799999999987544433211             11222211  11111        11 


Q ss_pred             ---HHHHHhhc-----CCccEEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          171 ---DAVEALAD-----KNTAAMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       171 ---~~l~~~~~-----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                         +.+++.+.     .+..+.++..| ++..| ..+|.++++++.++|++||+++|.||++.++.+.|..+ ....++.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv  266 (442)
T TIGR00709       188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF-AFEHAGI  266 (442)
T ss_pred             HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh-HHHHcCC
Confidence               11233332     12234444444 44444 56899999999999999999999999999987766432 2333333


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL  319 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  319 (419)
                      .+.++   +++|.++. |+++|++++++        + .+.+... ...+++.+++++.++.++|+...++.   ..+++
T Consensus       267 ~PDiv---~~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~---l~~~~  330 (442)
T TIGR00709       267 EPDFV---VMSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDN---LAQNA  330 (442)
T ss_pred             CCcEE---EEcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHH
Confidence            33334   37899765 89999999865        2 2222211 23456789999999988887533222   23345


Q ss_pred             HHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc-ccC----CC----CHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          320 RESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL-LED----IN----DDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       320 ~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~-~~~----~~----~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                      +++.+++.+.|++    .|.+.  ....-|.+..+.+.... ...    ..    ....+...+ .++||++.+....  
T Consensus       331 ~~~g~~l~~~L~~l~~~~~~v~--~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~~~--  405 (442)
T TIGR00709       331 QERGERITSFLDDMIKEHPCIG--NVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGAC-FENGLLLETGGRE--  405 (442)
T ss_pred             HHHHHHHHHHHHHHHHhCCCee--eeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHH-HHCCeEEeecCCC--
Confidence            5555555555543    33222  12334666666664211 000    00    022344444 5689998764321  


Q ss_pred             CCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          387 KNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .+.+|+.+  ..++++++++++++++++.+..+
T Consensus       406 ~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~  438 (442)
T TIGR00709       406 GEVFRLLCPITIDQEECEEGISRFKQAVEEALA  438 (442)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            46889888  46999999999999999987754

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.87  E-value=6.6e-19  Score=166.79  Aligned_cols=339  Identities=13%  Similarity=0.046  Sum_probs=220.8

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhcC-------
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLAR-------  129 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~~-------  129 (419)
                      ++.|.+.+.+...+..... .+.......++.+.+.+++.+.+|.+...+++.+  |+|+|++++.++.+...       
T Consensus        52 ~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~  130 (431)
T TIGR01788        52 WMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME  130 (431)
T ss_pred             CCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence            4567788888888753322 2222233457777777777777764311134544  89999999998865431       


Q ss_pred             -CC-----CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769          130 -PG-----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ  203 (419)
Q Consensus       130 -~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  203 (419)
                       .|     ..|++..-.|+++...++..|+++..+++++ +++.+|++.|++++++++.+|+++..+|.||.+.|   ++
T Consensus       131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~  206 (431)
T TIGR01788       131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VK  206 (431)
T ss_pred             hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HH
Confidence             12     3688889999999999998999999999865 34579999999999988999999999999999999   88


Q ss_pred             HHHHHHHhC------CCeEEEccccccccc---CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769          204 EIAEMARKL------RVMVVADEVYGHLTF---GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ  274 (419)
Q Consensus       204 ~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  274 (419)
                      +|.++|+++      |+++++|.+|+.+..   -+.....+...   .-..+..|.+|+ +.....+|.+++++...   
T Consensus       207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~---~~DSis~s~HK~-~~~P~g~G~l~~r~~~~---  279 (431)
T TIGR01788       207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLP---RVKSINVSGHKY-GLVYPGVGWVIWRDEEA---  279 (431)
T ss_pred             HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCC---CceEEEECchhc-cCCCCCcEEEEEeChHH---
Confidence            999999999      999999999996431   12222222211   112455589998 44445599999876321   


Q ss_pred             hhhHHHHHHh---hh-----ccccCCchHH--HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CC
Q 014769          275 KSGIIDSIKD---CL-----SIYSDIPTFI--QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-PE  343 (419)
Q Consensus       275 ~~~~~~~l~~---~~-----~~~~~~~~~~--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~  343 (419)
                         +.+.+..   +.     +.+...+...  ..+....|.......+++..++..++.+++.+.|+++|+++++.+ |.
T Consensus       280 ---l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~  356 (431)
T TIGR01788       280 ---LPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSG  356 (431)
T ss_pred             ---cchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCC
Confidence               1121111   00     0011111111  111222223333577888899999999999999999888885533 44


Q ss_pred             ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC---CCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV---GLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .+. +.++++.....+ .+..++.+.| .++|+.+......   ....++|+++  ..+++.++.+++.|+.++.++
T Consensus       357 ~~i-V~Fr~~~~~~~~-~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (431)
T TIGR01788       357 IPL-VAFKLKDDADPG-YTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL  430 (431)
T ss_pred             ceE-EEEEeCCCCCCC-cCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence            443 344554211001 1345666665 6679875332221   1234689998  467899999999999988764

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.87  E-value=4.9e-19  Score=170.79  Aligned_cols=339  Identities=11%  Similarity=0.049  Sum_probs=211.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC---CCC---CHHH----HHHHHHHHHhhCCCCCCCCcE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT---NSG---IPPA----RRAIADYLSRDLPYKLSADDV  110 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g---~~~l----r~~ia~~l~~~~~~~~~~~~i  110 (419)
                      ..+.|+|--...      ..+|.+++++...+.+....+++.   ..|   ...+    |+.+++++      +.+++++
T Consensus        33 ~~~~l~l~~sen------~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf------~a~~~~~  100 (452)
T PTZ00094         33 QIEGLELIASEN------FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF------GLDPEEW  100 (452)
T ss_pred             HHcCeeEecccc------cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh------CCCcccc
Confidence            456788877652      357888888887775422111221   112   2223    34556665      4566777


Q ss_pred             EEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh----------cCCEEEEEeccCCCCcccChHHHHHhh
Q 014769          111 YVT---LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----------KQVEVRHFDLLPERNWEVDLDAVEALA  177 (419)
Q Consensus       111 ~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~l~~~~  177 (419)
                      .++   +|+++++..++.++.++||+|++....|.++......          .++++..++++.  ++.+|++.+++.+
T Consensus       101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l  178 (452)
T PTZ00094        101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA  178 (452)
T ss_pred             eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence            666   7899999999999999999999988777664332211          112333444443  3579999999998


Q ss_pred             cC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCCCcEEEEecCCCcCC
Q 014769          178 DK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWL  255 (419)
Q Consensus       178 ~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~  255 (419)
                      +. +++.+++.  ++.+|...|   +++|.++|+++|+++++|++|+.......... ++.     +..++++|++|+++
T Consensus       179 ~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~  248 (452)
T PTZ00094        179 KAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR  248 (452)
T ss_pred             HHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC
Confidence            54 55665543  345999999   88888999999999999999998655432211 111     22388899999853


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                        |.+.|++++++.  ..  +.+...++...  .+.++++.....++..+++.......++..+++.++.+++.+.|.+.
T Consensus       249 --GP~Gg~l~~~~~--~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~  322 (452)
T PTZ00094        249 --GPRSGLIFYRKK--VK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR  322 (452)
T ss_pred             --CCCceEEEEecc--cc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC
Confidence              344588887542  11  01222222111  11235566666666667765433456677888999999999999876


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee-cCCCCC----CCCeEEEEee--c----CHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT-PGIYVG----LKNWLRIAFC--A----EPSALK  402 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~----~~~~~Ris~~--~----~~~~l~  402 (419)
                       |+.+..........++.+....    .+..++ ..+|+++||.+. ++..+.    .++++|+++.  +    +++|++
T Consensus       323 -g~~v~~~~~~~~~~~v~~~~~~----~~~~~~-~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~  396 (452)
T PTZ00094        323 -GYDLVTGGTDNHLVLVDLRPFG----ITGSKM-EKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK  396 (452)
T ss_pred             -CcEEecCCCCCceEeecCCcCC----CCHHHH-HHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH
Confidence             6663321111223444443211    133444 455588899994 443332    1478999983  3    489999


Q ss_pred             HHHHHHHHHHHHH
Q 014769          403 DGLGRMKAFCQRH  415 (419)
Q Consensus       403 ~~l~~l~~~~~~~  415 (419)
                      ++++.|.++++..
T Consensus       397 ~l~~~l~~~~~~~  409 (452)
T PTZ00094        397 FVADFLDRAVKLA  409 (452)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998753

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.87  E-value=3.3e-19  Score=166.03  Aligned_cols=280  Identities=20%  Similarity=0.218  Sum_probs=183.9

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEecc
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLL  161 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~  161 (419)
                      ...+++.|++..        +.+.++++++|+.|+..++.+++++||.|+++...|.+....+    ...|+++.+++. 
T Consensus        57 ~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-  127 (386)
T PF01053_consen   57 VRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-  127 (386)
T ss_dssp             HHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred             HHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence            457788887775        2478999999999999999999999999999999998765444    446888887743 


Q ss_pred             CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC-CeEEEcccccccccCCCCCCCccccCC
Q 014769          162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR-VMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                            -|++++++++++++++|++..|.||+..+.+   +++|+++|+++| +++++|..+.....    ..++ .++.
T Consensus       128 ------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~----~~pL-~~Ga  193 (386)
T PF01053_consen  128 ------TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN----QNPL-ELGA  193 (386)
T ss_dssp             ------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-GG-GGT-
T ss_pred             ------hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee----eccC-cCCc
Confidence                  3789999999999999999999999988888   999999999998 99999999976321    1122 3333


Q ss_pred             CCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                      +   +++.|++|.++..|-- .|.+++++.      .++.+.++.... .....++...+.+..-++.     +.-+.++
T Consensus       194 D---ivv~S~TKyl~Ghsdv~~G~vv~~~~------~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-----l~~R~~~  259 (386)
T PF01053_consen  194 D---IVVHSATKYLSGHSDVMGGAVVVNGS------SELYDRLREFRRLLGATLSPFDAWLLLRGLRT-----LPLRMER  259 (386)
T ss_dssp             S---EEEEETTTTTTTSSSE-EEEEEESSH------HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-----HHHHHHH
T ss_pred             e---EEEeeccccccCCcceeeEEEEECch------hhhhhhhcchhhhcCccchHHHHHHHhcCCCc-----HHHHHHH
Confidence            3   8899999997655533 566665441      146666665543 3344455554444444443     6666677


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC
Q 014769          319 LRESAEICYDGVKEIPCISCPNKP----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~  382 (419)
                      ..++...+.+.|+++|.+..|..|                .+|..+.+.++.        ..+.+.+++..-.+. ..|.
T Consensus       260 ~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~--------~~~~~~~f~~~l~l~-~~~~  330 (386)
T PF01053_consen  260 QNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG--------GEEAARRFLDALKLF-SIAP  330 (386)
T ss_dssp             HHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS--------HHHHHHHHHHH-SSS-EESS
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc--------chhhhHhHHhhhhhH-hhhh
Confidence            788888999999987765433333                233355667763        222233333333332 1222


Q ss_pred             CCCC---------------------------CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          383 YVGL---------------------------KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       383 ~~~~---------------------------~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      .+|.                           ++.+|+|+|.  |+.+++++.|+++++
T Consensus       331 SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl--Ed~~dLi~Dl~~AL~  386 (386)
T PF01053_consen  331 SLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL--EDPDDLIADLEQALE  386 (386)
T ss_dssp             S-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S--S-HHHHHHHHHHHHH
T ss_pred             hcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc--CCHHHHHHHHHHhcC
Confidence            2211                           3679999997  456777777777764

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.87  E-value=2.6e-18  Score=164.05  Aligned_cols=332  Identities=15%  Similarity=0.144  Sum_probs=204.0

Q ss_pred             eeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769           44 VVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV  122 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~  122 (419)
                      +..|++|.|......+ .++.-.+++.+.+..... .+++  ...++++++++++      +  .+++++++|+++++..
T Consensus        25 ~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~------g--~~~~v~~~sGt~al~~   93 (438)
T PRK15407         25 PKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFL------G--VRYALLVNSGSSANLL   93 (438)
T ss_pred             cccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHh------C--CCeEEEECCHHHHHHH
Confidence            3447888775432211 223333444455544322 2333  2579999999998      2  3479999999999999


Q ss_pred             HHHHh---------cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769          123 ILSVL---------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC  193 (419)
Q Consensus       123 ~~~~l---------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt  193 (419)
                      ++.++         .++||+|+++.++|..+...+...|..++.+++++ ..+.+|++.+++++++++++|+++++   +
T Consensus        94 aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~  169 (438)
T PRK15407         94 AFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---L  169 (438)
T ss_pred             HHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---C
Confidence            98876         36899999999999999888999999999998764 35789999999999888999888875   4


Q ss_pred             ccCCCHHHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc
Q 014769          194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI  272 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  272 (419)
                      |...+   +++|.++|+++|+++|+|++|+... +.|..   +..+++    +.+.||+....+.....|+++++++   
T Consensus       170 G~p~d---l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~gd----~~~fSf~~~k~~~~geGG~l~t~d~---  236 (438)
T PRK15407        170 GNPFD---LAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFGD----IATLSFYPAHHITMGEGGAVFTNDP---  236 (438)
T ss_pred             CChhh---HHHHHHHHHHCCCEEEEECccchhhhcCCee---eeccCc----eEEEeCCCCCCccccCceEEEECCH---
Confidence            44444   8999999999999999999998753 23321   233332    4555665332233223589988763   


Q ss_pred             cchhhHHHHHHhhhcccc------------------------------------CCc-hHHHHHHHHHHcccchHHHHHH
Q 014769          273 FQKSGIIDSIKDCLSIYS------------------------------------DIP-TFIQGAIPQILEKTKEDFFCKL  315 (419)
Q Consensus       273 ~~~~~~~~~l~~~~~~~~------------------------------------~~~-~~~~~a~~~~l~~~~~~~~~~~  315 (419)
                          ++.+.++...+...                                    +.| .+....++-.+.+  -+.+++.
T Consensus       237 ----~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~q--L~~l~~~  310 (438)
T PRK15407        237 ----LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQ--LEKLPGF  310 (438)
T ss_pred             ----HHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHH--HHHHHHH
Confidence                34444443322100                                    000 0111111111111  2446666


Q ss_pred             HHHHHHHHHHHHHHhhcCCC-CCCCCCCCc---eEEE-EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC-------
Q 014769          316 IDTLRESAEICYDGVKEIPC-ISCPNKPEG---SMVT-MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY-------  383 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~~~-~~~~~~p~~---g~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------  383 (419)
                      .++-+++.+.+.+.|..+++ +.....+.+   .++. .+.++...   ..+..++...| +++||.+.+...       
T Consensus       311 ~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~Rd~l~~~L-~~~GI~~~~~~~~~~~~~p  386 (438)
T PRK15407        311 IEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA---GFTRVELVKYL-EENKIGTRLLFAGNLTRQP  386 (438)
T ss_pred             HHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC---CCCHHHHHHHH-HHCCCCccccCCCccccCh
Confidence            66667777788888877654 321112222   2222 23333210   11356777666 667997653221       


Q ss_pred             -C-----C-C----------CCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769          384 -V-----G-L----------KNWLRIAF--CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       384 -~-----~-~----------~~~~Ris~--~~~~~~l~~~l~~l~~~~~  413 (419)
                       |     . .          ...+-|.+  ..++++++..++.|+++++
T Consensus       387 ~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~  435 (438)
T PRK15407        387 YFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG  435 (438)
T ss_pred             hhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence             0     0 0          12344444  3478999999999998875

>PRK06541 hypothetical protein; Provisional

Probab=99.86  E-value=1.3e-18  Score=167.08  Aligned_cols=359  Identities=14%  Similarity=0.094  Sum_probs=218.7

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|.-... .-.-+|.+.+++.+++.....  +.......+.+..+++.+.+..+  ...+.++++++
T Consensus        46 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~s  120 (460)
T PRK06541         46 IWDDRGKRYLDGLAGLFVVQ-VGHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTG  120 (460)
T ss_pred             EEeCCCCEEEECCccHHhcc-CCCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCC
Confidence            44456999999988843321 123579999999999876421  11111122444455555544222  22468999999


Q ss_pred             HHHHHHHHHHHhcC-------C-CCeEEeeCCCCCCcHHHHhhc-CC------------EEEEEeccCCCC---cccC--
Q 014769          116 CKQAVEVILSVLAR-------P-GANVLLPRPGWPYYEGIAQRK-QV------------EVRHFDLLPERN---WEVD--  169 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~~--  169 (419)
                      +++|++.+++....       + ..+|+....+|++....+... +.            .+..++......   +.-+  
T Consensus       121 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  200 (460)
T PRK06541        121 GSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPE  200 (460)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHH
Confidence            99999999887542       1 267899999998865433322 11            111122110000   1111  


Q ss_pred             ------hHHHHHhhc---CCccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          170 ------LDAVEALAD---KNTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       170 ------~~~l~~~~~---~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                            ++.+++.+.   .+..+.+++.| ++++|.+. |.+++++|.++|+++|+++|+||++.++...|..+ ....+
T Consensus       201 ~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~  279 (460)
T PRK06541        201 AFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERF  279 (460)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhc
Confidence                  355666664   24566777888 78889875 59999999999999999999999998764444322 12222


Q ss_pred             CCCCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFF  312 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~  312 (419)
                      +..+.++   +++|.++ .|+ ++|++++++        ++++.+...     ...+++.++++..++.+.++....+  
T Consensus       280 gv~PDiv---t~gK~l~-~G~~pigav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~--  345 (460)
T PRK06541        280 GYVPDII---TCAKGIT-SGYSPLGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFERE--  345 (460)
T ss_pred             CCCCCEE---Eeccccc-CCccceeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence            2222233   5899965 786 999999975        566665422     1225566777777777777653222  


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCcccc--cCCCC------H-HHHHHHHHHhcCeEeecCC
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWLL--EDIND------D-IEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~--~~~~~------~-~~~~~~ll~~~gv~v~~g~  382 (419)
                       ...++++++.+++.+.|+++....++ .....|.++-+.+.....  .....      . ..+...+ .++||++.+..
T Consensus       346 -~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~  423 (460)
T PRK06541        346 -GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPAL-FEAGLYCRADD  423 (460)
T ss_pred             -cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHH-HhCCeEEEecC
Confidence             34566777777777777765222211 122345565666632100  00000      0 1334444 56799998731


Q ss_pred             CCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhcc
Q 014769          383 YVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       383 ~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                       . ....+||++.  .++++|++++++|.+++++.-.|
T Consensus       424 -~-g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~~  459 (460)
T PRK06541        424 -R-GDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWAR  459 (460)
T ss_pred             -C-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence             1 1367999995  79999999999999999876443

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.86  E-value=1.9e-20  Score=170.70  Aligned_cols=223  Identities=16%  Similarity=0.161  Sum_probs=154.2

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN  165 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  165 (419)
                      +.++++.+++++      +. .+.+++++|+++++..++.+++++||+|+++.|+|.++...+...|..+++++...+.+
T Consensus        61 i~~~~~~~A~~~------ga-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~  133 (294)
T cd00615          61 IKEAQELAARAF------GA-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPY  133 (294)
T ss_pred             HHHHHHHHHHHh------CC-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcc
Confidence            578889999987      32 23455599999999999999999999999999999998888888999988887654433


Q ss_pred             ----cccChHHHHHhhcC--CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCcccc
Q 014769          166 ----WEVDLDAVEALADK--NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLF  238 (419)
Q Consensus       166 ----~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~  238 (419)
                          ..+|++.+++++++  +++++++++| |++|.+++   +++|+++|+++|+++|+|++|+. +.+.+..+..... 
T Consensus       134 ~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~-  208 (294)
T cd00615         134 YGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM-  208 (294)
T ss_pred             cCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhh-
Confidence                36899999998863  5788999998 78999998   89999999999999999999974 3343322212111 


Q ss_pred             CCCCcEEEEecCCCcCCCCCceeEEEE-eeCCCCccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKL  315 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  315 (419)
                        .+..+++.|++|+  ++|++.|+++ .++.  ..    ...++....  ..+++++.+...++..++.... ..-.+.
T Consensus       209 --~~~div~~S~hK~--l~g~~~~~~l~~~~~--~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~-~~g~~~  277 (294)
T cd00615         209 --AGADIVVQSTHKT--LPALTQGSMIHVKGD--LV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMA-LEGKEL  277 (294)
T ss_pred             --cCCcEEEEchhcc--cchHhHHHHHHhCCC--cC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHH-HHhHHH
Confidence              2345899999997  5777765544 4332  11    112222221  1234566666555555554321 122334


Q ss_pred             HHHHHHHHHHHHHHhh
Q 014769          316 IDTLRESAEICYDGVK  331 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~  331 (419)
                      .+++.++.+.+++.|.
T Consensus       278 ~~~~~~~~~~~r~~l~  293 (294)
T cd00615         278 VEELIELALYARQEIN  293 (294)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            4556666666666553

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.86  E-value=1.2e-18  Score=158.90  Aligned_cols=351  Identities=13%  Similarity=0.069  Sum_probs=227.2

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .-+|+.+|||..++-... .-..+|.|.+++.+++.++.  .|+.+   .+++-.+|+.+.+..+   ..+.|-+++++|
T Consensus        49 DvDGn~YIDy~~~~Gp~i-lGH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGT  119 (432)
T COG0001          49 DVDGNEYIDYVLGWGPLI-LGHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGT  119 (432)
T ss_pred             eCCCCEeeehhccCcccc-cCCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchh
Confidence            446899999999964322 12367889999999998875  46654   3677777777766433   348999999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHH-hhcCCEEEEE--ecc---CCCC--c-----ccChHHHHHhhcCC--
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIA-QRKQVEVRHF--DLL---PERN--W-----EVDLDAVEALADKN--  180 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~-~~~g~~~~~~--~~~---~~~~--~-----~~~~~~l~~~~~~~--  180 (419)
                      ||...+++....  .-|+|+..+-||+++.+.+ ...|..+-..  |-.   +...  .     =-|++.+++++++.  
T Consensus       120 EAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~  199 (432)
T COG0001         120 EATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGD  199 (432)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCC
Confidence            999999887643  3389999999999875544 3333211111  100   0000  0     01788898888764  


Q ss_pred             ccEEEEeCC--CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          181 TAAMVIINP--GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       181 ~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ..+.+|+.|  .|-.-+...+++++.|.++|+++|+++|.||+..+|...-.+......+.+|     +.++.|. ...|
T Consensus       200 ~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGGG  273 (432)
T COG0001         200 DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGGG  273 (432)
T ss_pred             cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcCC
Confidence            456677877  5644446788899999999999999999999999877653333333344433     3478899 6789


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhhh----ccccCCchHHHHHHHHHHcccch--HHHHHHHHHHHHHHHHHHHHhhc
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL----SIYSDIPTFIQGAIPQILEKTKE--DFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      +++|.+.++.        ++++.+....    .-+.+.|+++..|..+.++....  ..++++.+.-.+.++-+.+.+.+
T Consensus       274 lP~ga~gGr~--------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~  345 (432)
T COG0001         274 LPIGAFGGRA--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAER  345 (432)
T ss_pred             cceeeeccHH--------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999876        6777665432    22456788888777777765332  13444444444444444444444


Q ss_pred             CCCCCCCCCCCceEEEEeecCc--cccc-----CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHH
Q 014769          333 IPCISCPNKPEGSMVTMVKLNP--WLLE-----DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGL  405 (419)
Q Consensus       333 ~~~~~~~~~p~~g~~~~~~~~~--~~~~-----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l  405 (419)
                      . ++.....-.+++|-+.-.+.  .+++     +...-..+...+| ++||++.|+.+    ...=+|...++++|++.+
T Consensus       346 ~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~----ea~flS~ahte~di~~~~  419 (432)
T COG0001         346 H-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQF----EAGFLSTAHTEEDIDRTL  419 (432)
T ss_pred             h-CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCccc----cceeeecccCHHHHHHHH
Confidence            4 55533344455554432221  1110     0001234555554 46999988642    223477788999999999


Q ss_pred             HHHHHHHHHHhc
Q 014769          406 GRMKAFCQRHTK  417 (419)
Q Consensus       406 ~~l~~~~~~~~~  417 (419)
                      +.+.+++++...
T Consensus       420 ~a~~~~~~~~~~  431 (432)
T COG0001         420 EAADEAFKELAG  431 (432)
T ss_pred             HHHHHHHHHhhc
Confidence            999999987654

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.86  E-value=6.8e-19  Score=164.21  Aligned_cols=219  Identities=15%  Similarity=0.124  Sum_probs=159.4

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~  160 (419)
                      ....|++.++++-        ..+..++++++++|+..++.+++++||.|++++..|.+....    ++..|+++.+++.
T Consensus        63 t~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~  134 (395)
T PRK08114         63 THFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP  134 (395)
T ss_pred             hHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence            4567888888864        346788888899999999999999999999999999766544    4667888888753


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC--CeEEEcccccccccCCCCCCCcccc
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~--~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                             .|.+.+++++++++++|++.+|+||+|.+.|   +++|+++|++++  +++++|.+++....     .....+
T Consensus       135 -------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~~  199 (395)
T PRK08114        135 -------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALDF  199 (395)
T ss_pred             -------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHHc
Confidence                   3678899999989999999999999999999   999999999984  99999999975221     112234


Q ss_pred             CCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                      +.+   +++.|.+|.++.+| .-.|.++.+.        +..+.++... ......++...+.+..-|+     -+.-+.
T Consensus       200 GaD---ivv~S~tKyl~Ghsdv~~G~v~~~~--------~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~-----TL~lR~  263 (395)
T PRK08114        200 GID---ISIQAGTKYLVGHSDAMIGTAVANA--------RCWEQLRENSYLMGQMVDADTAYMTSRGLR-----TLGVRL  263 (395)
T ss_pred             CCc---EEEEcCcccccCCCcceeEEEEcCH--------HHHHHHHHHHHhccCCCCHHHHHHHHcCCC-----cHHHHH
Confidence            444   99999999877765 6677665432        3444454332 2233445444444333333     356666


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          317 DTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ++..++...+.+.|+++|.+..|..|
T Consensus       264 ~~~~~na~~va~~L~~hp~V~~V~yP  289 (395)
T PRK08114        264 RQHEESSLKVAEWLAEHPEVARVNHP  289 (395)
T ss_pred             HHHHHHHHHHHHHHHcCCCEeEEECC
Confidence            77888888999999987765534344

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.86  E-value=8.3e-19  Score=162.87  Aligned_cols=316  Identities=15%  Similarity=0.070  Sum_probs=210.1

Q ss_pred             ChHHHHHHHHHHHhC---CCCCCCCCCCCCH---HHHHHHHHHHHhhCCCCCCCCcEEEccc-HHHHHHHHHHHhcCCCC
Q 014769           60 TAVEAEDAIVDAVRS---GKFNCYATNSGIP---PARRAIADYLSRDLPYKLSADDVYVTLG-CKQAVEVILSVLARPGA  132 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~---~~~~~Y~~~~g~~---~lr~~ia~~l~~~~~~~~~~~~i~~t~g-~~~al~~~~~~l~~~gd  132 (419)
                      .|..+++++.+.+.+   .....|....-.+   ++-+.+.+.++..++. .+..+|++++| +|++++.++..+..+||
T Consensus         3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~-~~~~~v~~~~gsgT~a~ea~~~nl~~~~~   81 (349)
T TIGR01364         3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNI-PDNYEVLFLQGGATGQFAAVPLNLLAEGK   81 (349)
T ss_pred             CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCC-CCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence            456777888877663   1122222211122   4444444444444443 13346777755 99999999999998999


Q ss_pred             eEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCC--CcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHH
Q 014769          133 NVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPER--NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM  208 (419)
Q Consensus       133 ~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~  208 (419)
                      ++++...+.++  +...++..|. +..+..++..  +..++++.++  ++++++.|.+++..+.||+..+        ++
T Consensus        82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l  150 (349)
T TIGR01364        82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL  150 (349)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence            99988777765  3567788888 6666654222  2245666554  3457889999999999999875        55


Q ss_pred             HHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH------
Q 014769          209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI------  282 (419)
Q Consensus       209 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l------  282 (419)
                      ++.+++++++|.+.+.    +..+..+..+   +  +++.|.+|.++.+|  +|+++.+++        ..+++      
T Consensus       151 ~~~~~~l~iVDavss~----g~~~id~~~~---d--~~~~ssqK~lgP~G--lg~l~~s~~--------~~~~~~~~~~~  211 (349)
T TIGR01364       151 PDVKNAPLVADMSSNI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTVVIVRKD--------LLGRASRITPS  211 (349)
T ss_pred             cccCCCeEEEEccccc----cCccCCHHHc---c--EEEEecccccCCCc--eEEEEECHH--------HHhhcccCCCC
Confidence            6678999999999987    3233333332   2  77889999988666  888887652        22211      


Q ss_pred             ----Hh-h--hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C--CceEEEEee
Q 014769          283 ----KD-C--LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNK-P--EGSMVTMVK  351 (419)
Q Consensus       283 ----~~-~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p--~~g~~~~~~  351 (419)
                          .. .  ....++++....+++.++|+....+ .++.+.++.+++.+++++.|++++|+..... |  .....+.+.
T Consensus       212 ~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~  291 (349)
T TIGR01364       212 MLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFT  291 (349)
T ss_pred             cchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEe
Confidence                10 1  1223578888888888888876556 5999999999999999999999976642211 2  122334445


Q ss_pred             cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769          352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                      ++..     ....++... +.++|+.+.+|..  ..+.+|+|+.  .+.+||+.+++.|++++++
T Consensus       292 ~~~~-----~~~~~~~~~-~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~  348 (349)
T TIGR01364       292 LGNE-----ELEKRFLKE-AEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK  348 (349)
T ss_pred             cCCh-----hHhHHHHHH-HHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence            5421     112444444 4678997777754  3468999993  5899999999999987765

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.86  E-value=2.7e-19  Score=167.47  Aligned_cols=311  Identities=15%  Similarity=0.090  Sum_probs=202.6

Q ss_pred             CCChHHHHHHHHHHHhCC-C--CCCCCCC-------CCCHHHHHHHHHHHHhhCCCCC-CCCcEEEccc-HHHHHHHHHH
Q 014769           58 FRTAVEAEDAIVDAVRSG-K--FNCYATN-------SGIPPARRAIADYLSRDLPYKL-SADDVYVTLG-CKQAVEVILS  125 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~-~--~~~Y~~~-------~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~g-~~~al~~~~~  125 (419)
                      .+.++.|++++.+.+.+. .  ...|...       .-+.+.|+.+++++      +. ++++|++|+| +|++++.++.
T Consensus         8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~------~~~~~~~vvf~~gs~T~a~~~~~~   81 (355)
T cd00611           8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELL------NIPDNYKVLFLQGGATGQFAAVPL   81 (355)
T ss_pred             CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHH
Confidence            357899999998887421 1  1112221       22457788888877      33 5678999987 9999999999


Q ss_pred             HhcC---CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccC-hHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769          126 VLAR---PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVD-LDAVEALADKNTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       126 ~l~~---~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      .+..   +||.|++ .+........++..|.++..++.+...++. + .+..+..++++++.|.+++..|.||..++   
T Consensus        82 ~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~---  156 (355)
T cd00611          82 NLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAPDAAYVHYCSNETIHGVEFD---  156 (355)
T ss_pred             hcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCCCCCEEEEeCCcccccEEcc---
Confidence            9987   4444443 111111233668889998888875332221 2 33333445678899999999999999753   


Q ss_pred             HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769          202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS  281 (419)
Q Consensus       202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  281 (419)
                           ++++.+|+++++|.+++.    |..+..+..++     +.+.|.+|.+|.+|  +|+++++++        ..++
T Consensus       157 -----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~~--------~~~~  212 (355)
T cd00611         157 -----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRKD--------LLGK  212 (355)
T ss_pred             -----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECHH--------HHhh
Confidence                 234458999999999997    33333333332     35566899887666  888888652        2221


Q ss_pred             HHh-------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCC--Cc
Q 014769          282 IKD-------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCIS-CPNKP--EG  344 (419)
Q Consensus       282 l~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~p--~~  344 (419)
                      +..             .....++++.....++.++++..... .++.+.++.+++.+++++.|+++||+. ....+  ..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs  292 (355)
T cd00611         213 ARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARS  292 (355)
T ss_pred             cccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcC
Confidence            111             11124577777888888888875555 588899999999999999999998763 11111  22


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~  411 (419)
                      +..+.+.++..     ....++...+ .+.|+...++..  ..+.+|+|+.  .+++|++++++.|+++
T Consensus       293 ~~vvsf~~~~~-----~l~~~~~~~~-~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         293 RMNVPFRLGKE-----ELEKEFLKEA-EAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             ceEEEEEcCCh-----hhhHHHHHHH-HHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            23344455421     0123333344 668998666653  3478999995  4899999999999874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.86  E-value=2.1e-19  Score=169.50  Aligned_cols=326  Identities=14%  Similarity=0.063  Sum_probs=205.7

Q ss_pred             eeeccCCCCCCCCCCCChHH-HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCC-CCCcEEEcc-cHHHHH
Q 014769           44 VVPLGYGDPTAFPCFRTAVE-AEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKL-SADDVYVTL-GCKQAV  120 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~-v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~-g~~~al  120 (419)
                      .+.|..|-      .++++. +++++...+.........-..-+.+.|+.+++++      +. ++++|++++ |+|+++
T Consensus        13 ~~~f~~Gp------~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~~~~gs~T~~~   80 (378)
T PRK03080         13 DPRFSSGP------CKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELL------SLPEGYEVGIVPGSDTGAW   80 (378)
T ss_pred             CCCcCCCC------cCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchHHHH
Confidence            45666662      234555 8888876543211111111233456777777776      33 345788775 899999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCc-HH-HHhhcCC-EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYY-EG-IAQRKQV-EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~-~~-~~~~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      +.++..+.++++.+++.+-.|..- .. ..+..|. ++..++.+  .+..+|+++++    . ++.|.+++..|.||..+
T Consensus        81 ~~~~~~l~~~~~~~vi~~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~----~-~~~V~~~h~~t~tG~~~  153 (378)
T PRK03080         81 EMALWSLLGARRVDHLAWESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVD----F-DRDVVFTWNGTTTGVRV  153 (378)
T ss_pred             HHHHHhcCCCCcceEEEeCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcC----C-CCCEEEEecCCccceec
Confidence            999999976433333334444432 22 2255788 88887754  33456766533    2 56688999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchh
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~  276 (419)
                      |   +++|++  +++|+++++|.+++..    ..+..+..+     .+++.|.+|+++. +|  +|+++++++       
T Consensus       154 p---i~~I~~--~~~g~~~vVDa~qs~G----~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~~-------  210 (378)
T PRK03080        154 P---VARWIG--ADREGLTICDATSAAF----ALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSPR-------  210 (378)
T ss_pred             c---chhhcc--ccCCCeEEEecccccc----cCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECHH-------
Confidence            9   777777  7889999999999873    233333332     3788899998654 45  888888652       


Q ss_pred             hHHHHHHh----------------------h--hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhh
Q 014769          277 GIIDSIKD----------------------C--LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       277 ~~~~~l~~----------------------~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~  331 (419)
                       ..+.+..                      .  ..+.++++.....++.++|+...+. .++++.++.+++.+.+++.|+
T Consensus       211 -~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~  289 (378)
T PRK03080        211 -AVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAE  289 (378)
T ss_pred             -HHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence             2222211                      0  0112345555555556666654444 578888999999999999999


Q ss_pred             cCCCCCCCC-CC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHH
Q 014769          332 EIPCISCPN-KP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLG  406 (419)
Q Consensus       332 ~~~~~~~~~-~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~  406 (419)
                      +++++..+. .+  .++..+.+.++...  .. .+.++..++++ +++.+..|......+.+|+|+.  .++++++.+++
T Consensus       290 ~~~~~~~~~~~~~~~s~~i~~~~~~~~~--~~-~~~~~~~~l~~-~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~  365 (378)
T PRK03080        290 KTPWATPLVADPATRSNTSVTLDFVDAQ--AA-VDAAAVAKLLR-ENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTP  365 (378)
T ss_pred             hCCCcccccCCccccCccEEEEEcCCch--HH-HHHHHHHHHHH-cCCeeccccccCCCCcEEEecCCCCCHHHHHHHHH
Confidence            886555331 12  12234445555300  00 13456666655 4888877653223578999994  68999999999


Q ss_pred             HHHHHHHHHh
Q 014769          407 RMKAFCQRHT  416 (419)
Q Consensus       407 ~l~~~~~~~~  416 (419)
                      .|+++++++.
T Consensus       366 al~~~~~~~~  375 (378)
T PRK03080        366 WLDWAFERLK  375 (378)
T ss_pred             HHHHHHHHHh
Confidence            9999888764

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.85  E-value=1.8e-18  Score=164.54  Aligned_cols=341  Identities=13%  Similarity=0.079  Sum_probs=207.9

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+|+.++||..|.-... .-.-+|.+.+++.+++..... ..|..    .+.+..+|+.+.+..+  -..+.++++++++
T Consensus        72 ~dG~~ylD~~~g~~~~~-lGh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~~SGs  144 (442)
T TIGR03372        72 TQGNEFIDCLGGFGIFN-VGHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTP--GKLKYSFFCNSGT  144 (442)
T ss_pred             CCCCEEEECCccHHhhh-cCCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence            45888999988822211 123579999999999875432 12222    2344455555543222  1236799999999


Q ss_pred             HHHHHHHHHhcC----CC-CeEEeeCCCCCCcHHHHhhcCCEEE----EEeccCCCC--cccChHHHHHhhcC-----Cc
Q 014769          118 QAVEVILSVLAR----PG-ANVLLPRPGWPYYEGIAQRKQVEVR----HFDLLPERN--WEVDLDAVEALADK-----NT  181 (419)
Q Consensus       118 ~al~~~~~~l~~----~g-d~vlv~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~~~~~l~~~~~~-----~~  181 (419)
                      ||++.+++....    .| .+|+....+|++....+........    +.++.+.-.  .-.|.+.+++.++.     +.
T Consensus       145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~  224 (442)
T TIGR03372       145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD  224 (442)
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence            999999987643    23 6799999999987544433321110    111111000  01256666665531     33


Q ss_pred             cEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-
Q 014769          182 AAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-  258 (419)
Q Consensus       182 ~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-  258 (419)
                      .+.+|+.| ....|.. .|+++++++.++|+++|+++|+||++.++...|.. .....++..+.++   +++|.+ ..| 
T Consensus       225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~l-g~G~  299 (442)
T TIGR03372       225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKAL-GGGV  299 (442)
T ss_pred             EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhh-cCCc
Confidence            45566666 4555664 57999999999999999999999999876555542 2222333222333   589995 467 


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc---
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE---  332 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~---  332 (419)
                      +++|.+++++        ++.+.+...   ...+++.++++..++.+.|+...++.+   .++.++..+++.+.|++   
T Consensus       300 ~Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l---~~~~~~~G~~l~~~L~~l~~  368 (442)
T TIGR03372       300 MPIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNL---PAQAAIKGDFLLDGFQQLAA  368 (442)
T ss_pred             ccceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHH
Confidence            6899998865        566666321   123556688888888888875332222   23344444445444443   


Q ss_pred             -CC-CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769          333 -IP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM  408 (419)
Q Consensus       333 -~~-~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l  408 (419)
                       .| .+..  ....|.++.+.+...     .....+...+ .++||++.+...  ..+.+|+.+  ..++++++++++++
T Consensus       369 ~~~~~i~~--vRG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l  438 (442)
T TIGR03372       369 EYPDLIIE--ARGKGLLMAIEFRDN-----EIGYAFAKEL-FQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAA  438 (442)
T ss_pred             hCCCceEE--EecceEEEEEEeCCh-----HHHHHHHHHH-HHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHH
Confidence             33 2221  234577777777531     0134556666 567999875422  146899988  46999999999999


Q ss_pred             HHHH
Q 014769          409 KAFC  412 (419)
Q Consensus       409 ~~~~  412 (419)
                      ++++
T Consensus       439 ~~~~  442 (442)
T TIGR03372       439 KDAL  442 (442)
T ss_pred             HHhC
Confidence            8763

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=8.1e-18  Score=153.62  Aligned_cols=312  Identities=21%  Similarity=0.236  Sum_probs=211.5

Q ss_pred             ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeC
Q 014769           60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPR  138 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~  138 (419)
                      ......+++.+.++.+.... ++  -..++++++++|+        ...+.+.++++|.|+.++++++ .+|||.|++++
T Consensus        13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps   81 (374)
T COG0399          13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS   81 (374)
T ss_pred             cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence            34677788899998877644 44  3589999999998        5678999999999999999976 48999999999


Q ss_pred             CCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769          139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA  218 (419)
Q Consensus       139 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  218 (419)
                      -+|....+.....|+++++++++++ .+.+|++.+++++++++++|+.++-   -|...+   +++|.++|++||++||+
T Consensus        82 ~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVhl---~G~~~d---m~~i~~la~~~~l~vIE  154 (374)
T COG0399          82 FTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVHL---AGQPCD---MDAIMALAKRHGLPVIE  154 (374)
T ss_pred             CchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEehh---ccCCCC---HHHHHHHHHHcCCeEEE
Confidence            9999999999999999999999865 5689999999999999999988765   244445   88999999999999999


Q ss_pred             cccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCC---
Q 014769          219 DEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI---  292 (419)
Q Consensus       219 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---  292 (419)
                      |.+++... |.|..   +..+++    +.+.||.  |.+.. | -.|.+++++       +++.++++...+.....   
T Consensus       155 DaAqa~Ga~y~gk~---vGt~Gd----~~~fSF~~~K~itt-g-EGGav~tnd-------~ela~k~~~lr~hG~~~~~~  218 (374)
T COG0399         155 DAAQAHGATYKGKK---VGSFGD----IGAFSFHATKNLTT-G-EGGAVVTND-------EELAEKARSLRNHGLSRDAV  218 (374)
T ss_pred             EcchhccCeecCcc---cccccc----eEEEEecCCCCccc-c-CceEEEeCC-------HHHHHHHHHHHHhCcCCCcc
Confidence            99998743 34432   233333    4445665  66433 3 558888765       35666666554321111   


Q ss_pred             ----------c---hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce---EE-EEeecCcc
Q 014769          293 ----------P---TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS---MV-TMVKLNPW  355 (419)
Q Consensus       293 ----------~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g---~~-~~~~~~~~  355 (419)
                                |   +-.|+|+.  +.+  -+.+++..++-++..+...+.|++++++.....+.+.   ++ ..+.++..
T Consensus       219 ~~y~~~~~G~N~rm~~iqAAig--l~Q--L~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~  294 (374)
T COG0399         219 FKYLHEELGYNYRLTEIQAAIG--LAQ--LERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE  294 (374)
T ss_pred             ccceeeecccccCHHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC
Confidence                      1   11122221  111  2446666666667777777888877665533333332   22 22333321


Q ss_pred             cccCCCCHHHHHHHHHHhcCeE----eecCCCC--------C---C--------CCeEEEEe--ecCHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVI----VTPGIYV--------G---L--------KNWLRIAF--CAEPSALKDGLGRMKA  410 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~----v~~g~~~--------~---~--------~~~~Ris~--~~~~~~l~~~l~~l~~  410 (419)
                          ..+...+...| ++.||.    ..|....        .   .        ...++|.+  ..+++++++.++.|++
T Consensus       295 ----~~~R~~l~~~L-~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~  369 (374)
T COG0399         295 ----GISRDALMESL-KEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKE  369 (374)
T ss_pred             ----CCCHHHHHHHH-HhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence                12345555444 777554    3442211        0   0        24677776  4689999999999999


Q ss_pred             HHHH
Q 014769          411 FCQR  414 (419)
Q Consensus       411 ~~~~  414 (419)
                      ++..
T Consensus       370 ~~~~  373 (374)
T COG0399         370 VLGS  373 (374)
T ss_pred             Hhcc
Confidence            8764

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.85  E-value=1.2e-17  Score=159.95  Aligned_cols=351  Identities=15%  Similarity=0.093  Sum_probs=210.6

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||..|.-... .-.-+|.+.+++.+++.....  +....-..+....+|+.+.+..+. -..+.+++++++++
T Consensus        51 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE  126 (441)
T PRK05769         51 VDGNVYLDFNAGIAVTN-VGHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTE  126 (441)
T ss_pred             CCCCEEEECCCchhhcc-cCCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence            45888999988844322 123578999999999876432  111111124455566666543221 12368999999999


Q ss_pred             HHHHHHHHhcC-C-CCeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCC--cc---------cChH
Q 014769          119 AVEVILSVLAR-P-GANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERN--WE---------VDLD  171 (419)
Q Consensus       119 al~~~~~~l~~-~-gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~---------~~~~  171 (419)
                      |++.+++.... . ..+|+....+|++....+... +.             .+..++......  +.         -.++
T Consensus       127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (441)
T PRK05769        127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD  206 (441)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence            99999987542 2 367888899998875443322 11             111222110000  00         0123


Q ss_pred             HHHH-hhc----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769          172 AVEA-LAD----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV  244 (419)
Q Consensus       172 ~l~~-~~~----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  244 (419)
                      .+++ .++    .+..+.+++.| ....|. ..+.++++++.++|+++|+++|+||++.++...|..+ ....++..+.+
T Consensus       207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi  285 (441)
T PRK05769        207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI  285 (441)
T ss_pred             HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence            3444 221    23455666777 445566 4679999999999999999999999999875555432 22233322233


Q ss_pred             EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE  324 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  324 (419)
                      +   +++|.++ .|+++|++++++        ++++.+......+++.+++++.++.+.|+....    ...++++++.+
T Consensus       286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~  349 (441)
T PRK05769        286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLEELEE----GLLENAQKLGE  349 (441)
T ss_pred             E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence            3   5789975 689999999875        344333222233456688888888888875322    44556666666


Q ss_pred             HHHHHhhcCC-CCCCC-CCCCceEEEEeecCccccc-CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHH
Q 014769          325 ICYDGVKEIP-CISCP-NKPEGSMVTMVKLNPWLLE-DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPS  399 (419)
Q Consensus       325 ~l~~~l~~~~-~~~~~-~~p~~g~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~  399 (419)
                      ++++.|+++. ...++ ....-|.++.+.+...... .......+...+ .++||++.+..    ...+|+++.  .+++
T Consensus       350 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~Gil~~~~~----~~~lr~~p~l~~t~~  424 (441)
T PRK05769        350 YLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEA-FKRGLLLLGAG----KSAIRIIPPLIITEE  424 (441)
T ss_pred             HHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHH-HhCCcEEecCC----CCEEEEeCCCCCCHH
Confidence            7776665431 11111 1223366666666321000 000123344444 56799987632    367899984  5999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 014769          400 ALKDGLGRMKAFCQRH  415 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~~  415 (419)
                      +|+++++++++++++.
T Consensus       425 ~id~~~~~l~~~l~~~  440 (441)
T PRK05769        425 EADIGLEILEEAIKEL  440 (441)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999764

>PRK02769 histidine decarboxylase; Provisional

Probab=99.85  E-value=1.7e-17  Score=155.25  Aligned_cols=289  Identities=12%  Similarity=0.075  Sum_probs=200.6

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCc--EEEcccHHHHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769           86 IPPARRAIADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL  161 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~  161 (419)
                      ..++.+.+.+++.+.+|.  ++++  .++|+|+|+++..++....  .+++.|++++-.|++....+..+|.+...++.+
T Consensus        63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~  140 (380)
T PRK02769         63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL  140 (380)
T ss_pred             hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence            456666666666665654  3344  4889999999877665542  467899999999999999999999988888875


Q ss_pred             CCCCcccChHHHHHhhcCC---ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC---CeEEEcccccccccCCC-CCCC
Q 014769          162 PERNWEVDLDAVEALADKN---TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR---VMVVADEVYGHLTFGSI-PYTP  234 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~De~~~~~~~~~~-~~~~  234 (419)
                      +  ++.+|+++|+++++++   +.+|+++.++|+||.+.|   +++|.++|+++|   +++++|.+|+.+...-. ...+
T Consensus       141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~  215 (380)
T PRK02769        141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP  215 (380)
T ss_pred             C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence            4  4579999999998775   788889999999999999   888999999998   69999999987543210 1111


Q ss_pred             ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh-------h-hccccCCchHHHHHHHHHHcc
Q 014769          235 MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-------C-LSIYSDIPTFIQGAIPQILEK  306 (419)
Q Consensus       235 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~~~a~~~~l~~  306 (419)
                      + .+.. +-..+..|.+|.+ .....+|.+++++.        ..+.+..       . ....++.+.....++..+|+.
T Consensus       216 ~-d~~~-~vDsis~s~HK~~-~~P~g~G~l~~r~~--------~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~  284 (380)
T PRK02769        216 F-SFAD-GIDSIAISGHKFI-GSPMPCGIVLAKKK--------YVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS  284 (380)
T ss_pred             C-CccC-CCCEEEECCcccC-CCCCCcEEEEEehh--------hhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence            1 1111 2225566899984 44456899988762        2232211       0 011234444445555566665


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          307 TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                      ...+.+++..++..++.+++.+.|++. +++.+..|... .+.++.+        + .++    .  +|..+.+.     
T Consensus       285 lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~-~v~f~~~--------~-~~~----~--~~w~l~~~-----  342 (380)
T PRK02769        285 LGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSI-TVVFPCP--------S-ERI----W--KKWHLATS-----  342 (380)
T ss_pred             HCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCce-EEEEcCC--------C-HHH----H--hCeeEccc-----
Confidence            556788999999999999999999886 77766566544 3333332        2 222    1  35655543     


Q ss_pred             CCeEEEEe--ecCHHHHHHHHHHHHHHHHH
Q 014769          387 KNWLRIAF--CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+++|+.+  ..+.+.++.+++.|...++.
T Consensus       343 ~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~  372 (380)
T PRK02769        343 GNQAHIITMPHHNKQQIDSLIDELIFDLKN  372 (380)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence            34889998  45788999999999887764

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.85  E-value=3.6e-18  Score=162.30  Aligned_cols=225  Identities=16%  Similarity=0.130  Sum_probs=152.9

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~  160 (419)
                      -...+++.++++.      +.  +..++++++++|+..++.++.++||+|+++...|.+..    ..+...|+++.+++ 
T Consensus        70 t~~~le~~la~l~------g~--~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-  140 (437)
T PRK05613         70 TVEALENRIASLE------GG--VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-  140 (437)
T ss_pred             HHHHHHHHHHHHh------CC--CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence            3567888888887      22  45555556668888888888899999999999998763    34567788888876 


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      ++     .|++.+++++++++++|++.++.||+|.+.|   +++|.++|+++|+++|+|.+++....    ..++ .++.
T Consensus       141 ~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~Ga  207 (437)
T PRK05613        141 NP-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----VRPL-ELGA  207 (437)
T ss_pred             CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc----cChH-HhCC
Confidence            22     2789999999988999999999999999999   99999999999999999999875221    1122 2333


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc----------------------------chhhHHHHHH-hh-hcccc
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF----------------------------QKSGIIDSIK-DC-LSIYS  290 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~----------------------------~~~~~~~~l~-~~-~~~~~  290 (419)
                         .+++.|++|.++..|--+|.+++.+....+                            ....+..+.+ .. .....
T Consensus       208 ---Divv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  284 (437)
T PRK05613        208 ---DVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA  284 (437)
T ss_pred             ---CEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence               388889999987766655665553211000                            0000111111 11 22233


Q ss_pred             CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769          291 DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP  339 (419)
Q Consensus       291 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  339 (419)
                      ..++...+.+..-|+     -+.-+.++..++...+.+.|+++|.+..|
T Consensus       285 ~~~p~~a~l~~rgl~-----TL~lR~~~~~~nA~~lA~~L~~hp~V~~V  328 (437)
T PRK05613        285 TLSPFNAWVTAQGLD-----TLSLRLERHNENAIKVAEFLNNHEKVAKV  328 (437)
T ss_pred             CCCHHHHHHHHcccC-----cHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence            445554444433333     36666677788888999999988765433

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.84  E-value=7.3e-18  Score=161.63  Aligned_cols=353  Identities=12%  Similarity=0.073  Sum_probs=209.4

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGC  116 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~  116 (419)
                      ..+|+.++||..|.-... .-.-+|.+.+++.++++.....  .......+....+++.+.+..+  -. .+.|++++++
T Consensus        38 D~dG~~ylD~~~g~~~~~-lGH~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lae~L~~~~p--~~~~~~v~f~~SG  112 (445)
T PRK08593         38 DVDGKTYIDLLASASSQN-VGHAPPRVVEAIKAQADKFIHY--TPAYMYHEPLVRLAKKLCELAP--GDFEKRVTFGLSG  112 (445)
T ss_pred             eCCCCEEEECCccHHhhc-CCCCCHHHHHHHHHHHHhccCc--cccccCCHHHHHHHHHHHHhCC--CCCCCEEEECCch
Confidence            446889999988743221 1235799999999998764321  1111122344445555544222  12 2589999999


Q ss_pred             HHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCC--cc-cC-------h
Q 014769          117 KQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERN--WE-VD-------L  170 (419)
Q Consensus       117 ~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~~-------~  170 (419)
                      ++|++.+++.... .| .+|+....+|++....+... +.             .+..++......  +. .+       +
T Consensus       113 seA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  192 (445)
T PRK08593        113 SDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYL  192 (445)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHH
Confidence            9999999987532 23 57888899998864333211 10             122222111000  00 01       1


Q ss_pred             HHHHHhhc----CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769          171 DAVEALAD----KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV  244 (419)
Q Consensus       171 ~~l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  244 (419)
                      +.+++.+.    .+..+.+|+.| .+..|.. .|.++++++.++|+++|+++|+||++.++...|..+ ....++..+.+
T Consensus       193 ~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pDi  271 (445)
T PRK08593        193 APLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPDL  271 (445)
T ss_pred             HHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCCE
Confidence            33443332    13345556666 5666775 799999999999999999999999998875555321 11222222222


Q ss_pred             EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA  323 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  323 (419)
                      +   +++|.++ .|+++|++++++        ++++.+.... .++++.++++..++.+.|+...++   +..++++++.
T Consensus       272 ~---t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g  336 (445)
T PRK08593        272 M---SFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE---SLLQRSAEKG  336 (445)
T ss_pred             e---eeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHH
Confidence            3   7899964 689999999975        5777665322 235667888888777777653322   2334444444


Q ss_pred             HHHHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769          324 EICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--  394 (419)
Q Consensus       324 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--  394 (419)
                      +++.+.|++    +|.+..  ...-|.++.+.+.........+   ...+...+ .++||++.+..    .+.+|+++  
T Consensus       337 ~~l~~~L~~l~~~~~~v~~--vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~----~~~lr~~p~l  409 (445)
T PRK08593        337 EYARKRFDQWVSKYNFVGD--VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYC-FEHGVVIIAVA----GNVLRFQPPL  409 (445)
T ss_pred             HHHHHHHHHHHhcCCcEEE--EeccceEEEEEEecCCCcCCCcHHHHHHHHHHH-HHCCeEEeccC----CCEEEEECCC
Confidence            555555543    332221  2233555555553210000011   23455555 56799986632    36799988  


Q ss_pred             ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          395 CAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       395 ~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      ..++++|+++++.+.+++.++.+.
T Consensus       410 ~~t~~~id~~~~~l~~~l~~~~~~  433 (445)
T PRK08593        410 VITYEQLDTALNTIEQAFTALEAG  433 (445)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcc
Confidence            468999999999999999887554

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.84  E-value=4.1e-18  Score=163.31  Aligned_cols=348  Identities=12%  Similarity=0.093  Sum_probs=214.5

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ..+|+.++||..|.-... .-.-+|.+.+++.+++..... ..|.    ..+.+..+++.+....+  -..+.+++++++
T Consensus        78 D~dG~~ylD~~~g~~~~~-lGH~~p~v~~Ai~~ql~~l~~~~~~~----~~~~~~~lae~L~~~~p--~~~~~v~f~~SG  150 (459)
T PRK11522         78 DTQGQEFIDCLGGFGIFN-VGHRNPVVVSAVQNQLAKQPLHSQEL----LDPLRAMLAKTLAALTP--GKLKYSFFCNSG  150 (459)
T ss_pred             ECCCCEEEECCcCHHhhh-cCCCCHHHHHHHHHHHhhCccccccc----CCHHHHHHHHHHHHhCC--CCCCEEEEeCCc
Confidence            345888999988832211 123579999999999875432 1122    23445555555544222  223689999999


Q ss_pred             HHHHHHHHHHhcC----CC-CeEEeeCCCCCCcHHHHhhcCCE-EEE---EeccCCCC--cccChHHHHHhhcC-----C
Q 014769          117 KQAVEVILSVLAR----PG-ANVLLPRPGWPYYEGIAQRKQVE-VRH---FDLLPERN--WEVDLDAVEALADK-----N  180 (419)
Q Consensus       117 ~~al~~~~~~l~~----~g-d~vlv~~p~~~~~~~~~~~~g~~-~~~---~~~~~~~~--~~~~~~~l~~~~~~-----~  180 (419)
                      ++|++.+++....    +| ..|+....+|++....+...... ...   .+..+.-.  .-.|.+.+++.+..     +
T Consensus       151 sEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~  230 (459)
T PRK11522        151 TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGD  230 (459)
T ss_pred             hHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCC
Confidence            9999999987642    23 46888899999875444332211 111   11111000  01256777766642     2


Q ss_pred             ccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          181 TAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       181 ~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ..+.+++.| ....|. ..|.++++++.++|+++|+++|+||++.++...|..+ ....++..+.++   +++|.+ ..|
T Consensus       231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~l-ggG  305 (459)
T PRK11522        231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKAL-GGG  305 (459)
T ss_pred             cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhh-hCC
Confidence            345566666 555666 4688999999999999999999999998765555421 222233222333   678995 456


Q ss_pred             -ceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC-
Q 014769          259 -WRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI-  333 (419)
Q Consensus       259 -~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-  333 (419)
                       +++|.+++++        ++.+.+...   ...+++.++++..++.+.|+....+   ...++++++.+++.+.|+++ 
T Consensus       306 ~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~  374 (459)
T PRK11522        306 VMPIGATIATE--------EVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLA  374 (459)
T ss_pred             CccceeEEEcH--------HHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHH
Confidence             6899999865        466655321   2234566888888887877764322   23455566666666666543 


Q ss_pred             ---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769          334 ---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM  408 (419)
Q Consensus       334 ---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l  408 (419)
                         |... ......|.++.+.+...     .....+...+ .++||.+.+...  ..+.+|+.+  ..++++++++++++
T Consensus       375 ~~~~~~i-~~VrG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~l  445 (459)
T PRK11522        375 REYPDLV-QEARGKGMLMAIEFVDN-----EIGYNFASEM-FRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKAA  445 (459)
T ss_pred             HhCCCce-eeEEeceeEEEEEecCc-----hHHHHHHHHH-HHCCeEEEecCC--CCCEEEEECCccCCHHHHHHHHHHH
Confidence               3211 11123467777777531     0134555555 567999976421  247899998  46999999999999


Q ss_pred             HHHHHHHhc
Q 014769          409 KAFCQRHTK  417 (419)
Q Consensus       409 ~~~~~~~~~  417 (419)
                      .+++++..+
T Consensus       446 ~~~l~~~~~  454 (459)
T PRK11522        446 RKALAAMRV  454 (459)
T ss_pred             HHHHHHHHH
Confidence            999987643

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.84  E-value=3e-18  Score=175.54  Aligned_cols=342  Identities=12%  Similarity=0.068  Sum_probs=214.7

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--C-CCCCCC----CCCCHHHHHHHHHHHHhhCCCCCCCC--cEEEcc
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--K-FNCYAT----NSGIPPARRAIADYLSRDLPYKLSAD--DVYVTL  114 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~-~~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~--~i~~t~  114 (419)
                      ++-|..+..+    ++.+..+.+++.+.+.+.  . ...|..    ..-+.+.|+.+++++      +++++  .|++|+
T Consensus        35 ~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l------ga~~~~~~VvFts  104 (805)
T PLN02724         35 VVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF------NAPPSDYACVFTS  104 (805)
T ss_pred             CEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh------CCCccceEEEEeC
Confidence            5777777532    223445666555544321  1 111111    123567888888888      55555  589999


Q ss_pred             cHHHHHHHHHHHh-cCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCC------CCcccCh--HHHHHhh-----
Q 014769          115 GCKQAVEVILSVL-ARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPE------RNWEVDL--DAVEALA-----  177 (419)
Q Consensus       115 g~~~al~~~~~~l-~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~------~~~~~~~--~~l~~~~-----  177 (419)
                      |+|++++.++.++ .++||.|++..-.|.+..   ..++..|+.+..++++..      ....+++  +.++..+     
T Consensus       105 naT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~  184 (805)
T PLN02724        105 GATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ  184 (805)
T ss_pred             ChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence            9999999999987 568999999877776543   334556888888887521      1112332  4555543     


Q ss_pred             -----cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC-----CCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769          178 -----DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL-----RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL  247 (419)
Q Consensus       178 -----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  247 (419)
                           .+++++|.+++.+|-||.++|.+.+.++.+.++++     ++++++|.+++.    +..+..+..++.+   +++
T Consensus       185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~D---fl~  257 (805)
T PLN02724        185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPAD---FVV  257 (805)
T ss_pred             cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCCC---EEE
Confidence                 13457889999999999999955443333333222     357999999986    4444455555554   888


Q ss_pred             ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------------------------hccccCCchHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------------------------LSIYSDIPTFIQGAIPQ  302 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------------------------~~~~~~~~~~~~~a~~~  302 (419)
                      .|++|++|.| ..+|+++++++        +.+.+...                         ..-.++++.+...++.+
T Consensus       258 ~S~HK~~GgP-~G~G~L~vr~~--------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~a  328 (805)
T PLN02724        258 VSFYKIFGYP-TGLGALLVRRD--------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRH  328 (805)
T ss_pred             EecceeccCC-CCceEEEEehh--------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHH
Confidence            8999987633 23899888752        22222110                         01134666677677777


Q ss_pred             HHcccchHHHHHHHHHHHHHHHHHHHHhhcCC------CCCCCCCC-------CceEEEEeecCcccccCCCCHHHHHHH
Q 014769          303 ILEKTKEDFFCKLIDTLRESAEICYDGVKEIP------CISCPNKP-------EGSMVTMVKLNPWLLEDINDDIEFALK  369 (419)
Q Consensus       303 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~~p-------~~g~~~~~~~~~~~~~~~~~~~~~~~~  369 (419)
                      +++....-..++..++.+...+++.+.|++++      ++.++...       ..+..+.+.+....  +..-....+.+
T Consensus       329 al~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~--~~~v~~~~v~~  406 (805)
T PLN02724        329 GFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRAD--GSWVGHREVEK  406 (805)
T ss_pred             HHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCC--CCEeCHHHHHH
Confidence            77654333567777888889999999998775      34423111       11223333343211  00012334567


Q ss_pred             HHHhcCeEeecCCCCCC-----------------------------------CCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          370 LAKEESVIVTPGIYVGL-----------------------------------KNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       370 ll~~~gv~v~~g~~~~~-----------------------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      ++.++||.++.|..+..                                   .+.+|+|++  .+.+|++++++.|++..
T Consensus       407 l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~  486 (805)
T PLN02724        407 LASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF  486 (805)
T ss_pred             HHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence            77889999998876531                                   278999995  58899999999999866


Q ss_pred             H
Q 014769          413 Q  413 (419)
Q Consensus       413 ~  413 (419)
                      -
T Consensus       487 ~  487 (805)
T PLN02724        487 V  487 (805)
T ss_pred             h
Confidence            3

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.84  E-value=3.8e-18  Score=160.73  Aligned_cols=307  Identities=14%  Similarity=0.163  Sum_probs=198.2

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH-HHHHHHHHHhcC---CCCeEEeeCCCCCCcHHHHhhcCCEEEEEec-
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCK-QAVEVILSVLAR---PGANVLLPRPGWPYYEGIAQRKQVEVRHFDL-  160 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~-~al~~~~~~l~~---~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~-  160 (419)
                      ...+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++..   +||.|+++.-+|.+....+...|++++.++. 
T Consensus       103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~  181 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV  181 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence            3455555555554444532 124688888888 688888887753   5899999999999999999999999999985 


Q ss_pred             cCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769          161 LPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                      ..++++.+|++.+++++++   +.+++++.+|+  |+.....+++++|.++|+++|+++|+|++|+.....-..... ..
T Consensus       182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~-~g  258 (444)
T TIGR03531       182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELIN-KA  258 (444)
T ss_pred             ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhh-cc
Confidence            2455789999999999975   34556666665  444445566999999999999999999999853211000000 01


Q ss_pred             cCCCCc-EEEEecCCCcCCCCCceeEEEE-eeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHH
Q 014769          238 FGSIVP-VITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKL  315 (419)
Q Consensus       238 ~~~~~~-~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  315 (419)
                      .. .++ .+++.|++|.+.++|.  |+++ +++       +++++.++..... ...+.+.+.+...++.. ..+.++++
T Consensus       259 ~~-~Grad~vv~s~hK~l~~pg~--Gg~I~~~d-------~el~~~i~~~y~g-~~~~s~~~~~~~~ll~~-G~~g~~~l  326 (444)
T TIGR03531       259 IK-VGRVDAVVSSTDKNFMVPVG--GAIIYSFD-------ENFIQEISKSYPG-RASASPSLDVLITLLSL-GSKGYLEL  326 (444)
T ss_pred             cc-ccCCCeEEEeCccCCCCCCC--EEEEEECC-------HHHHHHHHHhccC-CCCChHHHHHHHHHHHh-CHHHHHHH
Confidence            11 111 3667799999887775  5544 544       2566666654321 22345566666666654 35788888


Q ss_pred             HHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCe----EeecCC------
Q 014769          316 IDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV----IVTPGI------  382 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv----~v~~g~------  382 (419)
                      .++..++++.+.+.|+++   -|......|....-+-+.+....   ..+...+- .+|...+|    .|.||.      
T Consensus       327 i~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~---~~~~~~~g-~~l~~~~v~g~r~v~~~~~~~~~~  402 (444)
T TIGR03531       327 LKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK---GKDPTMLG-SMLYSRRVTGPRVVTNGDSKTVGG  402 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc---ccCHHHHH-HHHHhCCCCCceeecCCCceEECC
Confidence            888899999998888764   14443334555544444454221   12344444 44455566    245665      


Q ss_pred             -C---CCC------CCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          383 -Y---VGL------KNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       383 -~---~~~------~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                       .   |+.      ..|+-++.  +.+.+|++.++++|++++
T Consensus       403 ~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~  444 (444)
T TIGR03531       403 CEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL  444 (444)
T ss_pred             EEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence             2   222      13555554  678999999999998753

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.84  E-value=1.1e-17  Score=161.82  Aligned_cols=351  Identities=13%  Similarity=0.085  Sum_probs=212.1

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ..+|+.+|||..|.-+..- -.-+|.+.+++.+++.....  +... .+..+....+++.+.+... +.+.+.++++++|
T Consensus        85 D~dG~~ylD~~sg~~~~~l-Gh~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SG  160 (504)
T PLN02760         85 DINGKKYLDALAGLWCTAL-GGSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSG  160 (504)
T ss_pred             ECCCCEEEEcCcCHHhccc-CCCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCCh
Confidence            3468999999998432221 24679999999999876432  1111 1234555666666544221 2233579999999


Q ss_pred             HHHHHHHHHHhc------C-CC-CeEEeeCCCCCCcHHHHhh-cCCE------------EEEEeccCCCCcc--------
Q 014769          117 KQAVEVILSVLA------R-PG-ANVLLPRPGWPYYEGIAQR-KQVE------------VRHFDLLPERNWE--------  167 (419)
Q Consensus       117 ~~al~~~~~~l~------~-~g-d~vlv~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~--------  167 (419)
                      ++|++.+++...      . ++ .+|+..+.+|++....... .|..            +..++.  ...+.        
T Consensus       161 sEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~  238 (504)
T PLN02760        161 SEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDC--PHYWRFHLPGETE  238 (504)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCC--CcccccCCCCCcH
Confidence            999999999874      1 23 6789999999876432222 2211            111111  01111        


Q ss_pred             -----cChHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769          168 -----VDLDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       168 -----~~~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                           ...+.++..+.   ++..+.+|+.| ..-.|. ..|.++++++.++|++||+++|+||++.+|...|..+. ...
T Consensus       239 ~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~  317 (504)
T PLN02760        239 EEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDK  317 (504)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHh
Confidence                 01234555553   23455667777 444565 46899999999999999999999999988765554322 222


Q ss_pred             cCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccc
Q 014769          238 FGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~  308 (419)
                      ++..+.+   .+|+|.++ .| +++|.+++++        ++++.+...        ...+++.++++..++.+.|+...
T Consensus       318 ~gv~PDi---vtlgK~lg-gG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~  385 (504)
T PLN02760        318 YNIKPDL---VSLAKALS-SAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYK  385 (504)
T ss_pred             cCCCCcE---EEeccccc-CCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence            3332223   36789964 45 5899998875        577766531        23356678888888888887533


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCcccc--cCCCC----HHHHHHHHHHhcCeEeecC
Q 014769          309 EDFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWLL--EDIND----DIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v~~g  381 (419)
                      ++   ...++++++.+++.+.|+++.....+ ....-|.++-+.+.....  .....    ...+...+ .++||.+.+.
T Consensus       386 ~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~  461 (504)
T PLN02760        386 ER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAEC-KKRGMLVRVA  461 (504)
T ss_pred             hC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHH-HhCCcEEEec
Confidence            22   23455555555666655543111111 112335666666632110  00000    22344444 5679998764


Q ss_pred             CCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          382 IYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       382 ~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .     +.+|+++  ..++++|+++++++++++.+..
T Consensus       462 g-----~~lrl~Ppl~it~eeid~~~~~l~~al~~~~  493 (504)
T PLN02760        462 G-----DNIMMSPPLIITPEEVDELISIYGKALKATE  493 (504)
T ss_pred             C-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            2     4689997  4799999999999999997663

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.84  E-value=5.2e-18  Score=158.37  Aligned_cols=324  Identities=15%  Similarity=0.095  Sum_probs=209.0

Q ss_pred             CCChHHHHHHHHHHHhCC---CCC-----CCCCC--CCCHHHHHHHHHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHH
Q 014769           58 FRTAVEAEDAIVDAVRSG---KFN-----CYATN--SGIPPARRAIADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSV  126 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~---~~~-----~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~  126 (419)
                      .+.++.+++++...+.+.   ...     ...+.  .-+.++++.+++++    +.+ +..+| +++++++.+++.++..
T Consensus        12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgt~~~Ea~~~n   86 (360)
T PRK05355         12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NIP-DNYKVLFLQGGASLQFAMVPMN   86 (360)
T ss_pred             CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEEcCCchHHHHHHHHh
Confidence            357899999998876321   111     11110  22234455555554    421 22345 5568889999999999


Q ss_pred             hcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHH-hhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769          127 LARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGNPCGNVFTYHHLQ  203 (419)
Q Consensus       127 l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~nptG~~~~~~~l~  203 (419)
                      +..+|+++++...+.++.  ...++..|.. ..+..++..+. .+..++++ .++++++.|.+++..+.||+..+  .+.
T Consensus        87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~  162 (360)
T PRK05355         87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP  162 (360)
T ss_pred             cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence            999999998887766653  5677778854 55554332332 33333434 67778899999999999999984  255


Q ss_pred             HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC--ccc-hhhHHH
Q 014769          204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG--IFQ-KSGIID  280 (419)
Q Consensus       204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--~~~-~~~~~~  280 (419)
                      +|      +|+++++|.+++.    +.....+..+   +  +++.|..|.++.+|  +|+++++++..  ... .+...+
T Consensus       163 ~i------~g~l~vVDavss~----g~~~idv~~~---d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~  225 (360)
T PRK05355        163 DT------GDVPLVADMSSDI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLD  225 (360)
T ss_pred             cc------CCCcEEEEcCccc----cCccCCHHHc---c--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHH
Confidence            55      7999999999987    3333334333   2  77888999987666  88888865210  000 001111


Q ss_pred             HHH--hhhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceEEEEeecCcc
Q 014769          281 SIK--DCLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKP--EGSMVTMVKLNPW  355 (419)
Q Consensus       281 ~l~--~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~~~~~  355 (419)
                      ...  ......++++....+++.++|+..... .++.+.++.++..+.+++.|++++.+.....+  ..+..+.+.++..
T Consensus       226 ~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~  305 (360)
T PRK05355        226 YKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE  305 (360)
T ss_pred             HHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh
Confidence            110  111234678888888988888876556 68999999999999999999998532222121  2223444555532


Q ss_pred             cccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                           .+..++...+ .++|+.+.+|..  ..+.+|+|+.  .+.+|++.+++.|++++++.
T Consensus       306 -----~~~~~~~~~~-~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~  359 (360)
T PRK05355        306 -----ELDKKFLAEA-KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERRH  359 (360)
T ss_pred             -----HHHHHHHHHH-HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence                 1234454554 567999866653  3578999994  57999999999999987653

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.83  E-value=1e-17  Score=153.94  Aligned_cols=285  Identities=19%  Similarity=0.165  Sum_probs=191.8

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~  159 (419)
                      +....|++.++++-        ..++.+.++++++|+..++.++.++||.|++++..|.+..    ..++..|+++.++.
T Consensus        63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d  134 (396)
T COG0626          63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD  134 (396)
T ss_pred             ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence            45678888888875        4678999999999999999999999999999999998754    44466788877764


Q ss_pred             ccCCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          160 LLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                      -       .+.+.+.+++. +++++|++-+|+||+..+.+   +.+|+++|+++|+++|+|..|....+..    ++ .+
T Consensus       135 ~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~----PL-~~  199 (396)
T COG0626         135 P-------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR----PL-EL  199 (396)
T ss_pred             C-------CChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC----hh-hc
Confidence            2       24456666666 58999999999999999988   9999999999999999999998644321    22 33


Q ss_pred             CCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKL  315 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  315 (419)
                      +.+   |++.|.+|.++..+ .=.|.++++++       .+.+.+....  .+....++...+.+..-|+     -+.-+
T Consensus       200 GaD---IVvhSaTKyl~GHsDvl~G~v~~~~~-------~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk-----TL~~R  264 (396)
T COG0626         200 GAD---IVVHSATKYLGGHSDVLGGVVLTPNE-------ELYELLFFAQRANTGAVLSPFDAWLLLRGLR-----TLALR  264 (396)
T ss_pred             CCC---EEEEeccccccCCcceeeeEEecChH-------HHHHHHHHHHHhhcCCCCCHHHHHHHHhccc-----hHHHH
Confidence            444   99999999977655 33454554442       3455543222  2334445555544444333     35666


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769          316 IDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT  379 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  379 (419)
                      .++..++...+.+.|++.|.+..|..|.                .|-.+.+.+...     .+...|++.| +-..+..+
T Consensus       265 m~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-----~~~~~f~~~L-~l~~~a~S  338 (396)
T COG0626         265 MERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-----EAAKKFLDSL-KLFKLAES  338 (396)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-----HHHHHHHHhC-CccEEecc
Confidence            6777888899999999887766555553                333444556531     1233344433 33333333


Q ss_pred             cCCCCC----------------------C-CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          380 PGIYVG----------------------L-KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       380 ~g~~~~----------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      -|....                      . ++-+|+|+|.  |+++.+++.|++++.+
T Consensus       339 lGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl--Ed~eDLi~Dl~~Al~~  394 (396)
T COG0626         339 LGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL--EDVEDLIADLEQALAK  394 (396)
T ss_pred             CCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHh
Confidence            332211                      0 4679999987  3556666777776654

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.83  E-value=6.3e-18  Score=158.86  Aligned_cols=307  Identities=21%  Similarity=0.252  Sum_probs=201.8

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP  139 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p  139 (419)
                      .++..+++.+.++++.+..+++  -..++++++++|+        +..+++.++++|.||.+++.++ .++||+|+++..
T Consensus         4 ~~e~~~~v~~~l~s~~~~~~g~--~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~   73 (363)
T PF01041_consen    4 TEEEIDAVLEVLRSGWLSTYGP--YVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAY   73 (363)
T ss_dssp             HHHHHHHHHHHHHHTCCSSSSH--HHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESS
T ss_pred             CHHHHHHHHHHHHhCCccCCCH--HHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCC
Confidence            3566678888888776544443  4579999999998        3578999999999999999998 468999999999


Q ss_pred             CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      +|......+...|.++++++++++ .+.+|++.+++++++++++|++++..   |...+   +.+|.++|+++|++||+|
T Consensus        74 t~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~~---G~~~d---~~~i~~~~~~~~i~lIeD  146 (363)
T PF01041_consen   74 TFPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHLF---GNPAD---MDAIRAIARKHGIPLIED  146 (363)
T ss_dssp             S-THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-GG---GB------HHHHHHHHHHTT-EEEEE
T ss_pred             cchHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecCC---CCccc---HHHHHHHHHHcCCcEEEc
Confidence            999999999999999999999764 67899999999999999999887753   33344   899999999999999999


Q ss_pred             cccccccc-CCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-------
Q 014769          220 EVYGHLTF-GSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-------  289 (419)
Q Consensus       220 e~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-------  289 (419)
                      .+++.... .|.   .+..+++    +.+.||+  |.+  +....|++++++       +++.++++.+.+..       
T Consensus       147 ~a~a~g~~~~g~---~~G~~gd----~~~fSf~~~K~i--~~geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~  210 (363)
T PF01041_consen  147 AAQAFGARYKGR---PVGSFGD----IAIFSFHPTKII--TTGEGGAVVTND-------PELAERARALRNHGRSRDAFR  210 (363)
T ss_dssp             -TTTTT-EETTE---ETTSSSS----EEEEESSTTSSS---SSS-EEEEEST-------HHHHHHHHHHTBTTEETSECS
T ss_pred             cccccCceeCCE---eccCCCC----ceEecCCCCCCC--cCCCCeeEEecH-------HHHHHHhhhhhccCcCccccc
Confidence            99997532 332   2233332    6667875  663  444458888866       35677776654321       


Q ss_pred             -----------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc-----eEEEEeecC
Q 014769          290 -----------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG-----SMVTMVKLN  353 (419)
Q Consensus       290 -----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~-----g~~~~~~~~  353 (419)
                                 +..+.+....+..-|     +.+++..++-+++.+.+.+.|..++++.....+..     .+.+.+.++
T Consensus       211 ~~~~~~~~g~n~rm~~~~AAigl~QL-----~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~  285 (363)
T PF01041_consen  211 RYRHELPPGYNFRMSELQAAIGLAQL-----KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLP  285 (363)
T ss_dssp             TTEESSSS--B-B-BHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEET
T ss_pred             cccccccCCcccccHHHHHHHHHHHH-----HHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccc
Confidence                       112222222222223     34666677777888888888988876532222222     112233444


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeecCCC-C-C------C----------------CCeEEEEe--ecCHHHHHHHHHH
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTPGIY-V-G------L----------------KNWLRIAF--CAEPSALKDGLGR  407 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~-~------~----------------~~~~Ris~--~~~~~~l~~~l~~  407 (419)
                      +...   .+..++.+.| ++.||.+.+... . .      .                ...+.+.+  ..++++++..++.
T Consensus       286 ~~~~---~~rd~l~~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~  361 (363)
T PF01041_consen  286 DEAL---ADRDELVEAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEA  361 (363)
T ss_dssp             CCGC---STHHHHHHHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHH
T ss_pred             cccc---chHHHHHHHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhc
Confidence            3210   1356666666 677999887652 1 0      0                12456665  3578999988887


Q ss_pred             HH
Q 014769          408 MK  409 (419)
Q Consensus       408 l~  409 (419)
                      |+
T Consensus       362 ir  363 (363)
T PF01041_consen  362 IR  363 (363)
T ss_dssp             HH
T ss_pred             cC
Confidence            74

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.83  E-value=9.9e-18  Score=148.06  Aligned_cols=322  Identities=17%  Similarity=0.167  Sum_probs=222.0

Q ss_pred             CCCChHHHHHHHHHHHhCCC------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-
Q 014769           57 CFRTAVEAEDAIVDAVRSGK------FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-  129 (419)
Q Consensus        57 ~~~~~~~v~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-  129 (419)
                      ...-+|.+.+|+.+.++...      -+--+.+.-.-+|++.+|++..+        +..++.++.--|+...+..|.+ 
T Consensus       183 gms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK--------~aALlFsSCfVANDstLftLak~  254 (570)
T KOG1360|consen  183 GMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQK--------EAALLFSSCFVANDSTLFTLAKK  254 (570)
T ss_pred             cccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcC--------cceeeeeeeeeccchHHHHHHHH
Confidence            45578999999999887521      11122234446899999998732        3344445555565565555543 


Q ss_pred             -CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCCCCccccCCCHHHHHH
Q 014769          130 -PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPCGNVFTYHHLQE  204 (419)
Q Consensus       130 -~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~  204 (419)
                       ||-.|......|-+.....+..+++-..+..    +   |++.|++++..    .++.|.+.+.+..+|.+-|   +++
T Consensus       255 lpgcei~SD~gNHASMI~GIrns~v~K~IFrH----N---D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---lee  324 (570)
T KOG1360|consen  255 LPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH----N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEE  324 (570)
T ss_pred             CCCcEEeccccchHHHHHHhhhcCCcceeecc----C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHH
Confidence             7888888888887777777777776555443    2   67777776643    4678888999999999999   999


Q ss_pred             HHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH
Q 014769          205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK  283 (419)
Q Consensus       205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~  283 (419)
                      |++++++||.+.++||++.-..|+..+...-..-+ ...-.|+.+++.|+||.-|   ||+++..        .+++-++
T Consensus       325 lcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~--------~LvDmiR  393 (570)
T KOG1360|consen  325 LCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR--------KLVDMIR  393 (570)
T ss_pred             HHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhh--------hHHHHHH
Confidence            99999999999999999998888754422111101 1112488999999999988   9999876        6899999


Q ss_pred             hhh-cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          284 DCL-SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       284 ~~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .+. .+  +.+.++.....+.++++....+.-...+...+++..++++.|.++ |+. + .|....++-+++.+.     
T Consensus       394 SyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiP-V-i~~pSHIiPv~vgda-----  465 (570)
T KOG1360|consen  394 SYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIP-V-IPNPSHIIPVRVGDA-----  465 (570)
T ss_pred             HhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCc-c-cCCCcceeeeeccCH-----
Confidence            885 22  223333333444444433222222344556677788899999887 787 3 455565665666432     


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ..+.+..+.|+.+++|+|..-.+...   ...+||++  ..+++-++.+++.+..++.++
T Consensus       466 ~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v  525 (570)
T KOG1360|consen  466 ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV  525 (570)
T ss_pred             HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence            13567788899999999987666554   35689988  468899999999999999875

>PRK07482 hypothetical protein; Provisional

Probab=99.83  E-value=2.3e-17  Score=158.75  Aligned_cols=355  Identities=14%  Similarity=0.089  Sum_probs=214.8

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +...+|+.+|||..|.-.... -.-+|.+.+++.++++...+  +... ....+.+..+|+.+.+..+  .+.+.+++++
T Consensus        44 l~D~dG~~ylD~~sg~~~~~l-Gh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~  118 (461)
T PRK07482         44 ITDAQGRRYIDAFAGLYCVNV-GYGRTEVAEAIAEQAKELAY--YHTYVGHGTEASITLSKRIIDRAP--AGMSKVYYGL  118 (461)
T ss_pred             EEECCCCEEEEcccchhhhcC-CCCCHHHHHHHHHHHHhcCc--cccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence            334569999999998543321 23579999999999986431  1110 1123455556666654322  2346899999


Q ss_pred             cHHHHHHHHHHHhc------C-CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCC---cc---
Q 014769          115 GCKQAVEVILSVLA------R-PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERN---WE---  167 (419)
Q Consensus       115 g~~~al~~~~~~l~------~-~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~---  167 (419)
                      ++++|++.+++...      . ++ .+|+....+|++....+.....             .+..++.+....   +.   
T Consensus       119 sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  198 (461)
T PRK07482        119 SGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSE  198 (461)
T ss_pred             chHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCH
Confidence            99999999998864      1 22 5789999999986433222111             111111111000   00   


Q ss_pred             -----cChHHHHHhhc---CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769          168 -----VDLDAVEALAD---KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       168 -----~~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                           .+++.+++.+.   .+..+.+|..| +...|.. .|.+++++|.++|++||+++|.||++.+|...|..+. ...
T Consensus       199 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~~~  277 (461)
T PRK07482        199 EQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFG-SDH  277 (461)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhh-HHh
Confidence                 13466666663   13355667777 4445665 6889999999999999999999999999866654332 233


Q ss_pred             cCCCCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccc
Q 014769          238 FGSIVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~  308 (419)
                      ++..+.++   +++|.+ ..|. ++|.+++++        ++.+.+...        ...+++.++++..++.+.|+...
T Consensus       278 ~gv~PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~  345 (461)
T PRK07482        278 YGIEPDLI---TVAKGL-TSAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILE  345 (461)
T ss_pred             cCCCCCEE---EEcccc-ccCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHH
Confidence            34333444   467994 5574 899988865        466655421        22356778888888888887643


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccc--cCCCC----HHHHHHHHHHhcCeEe
Q 014769          309 EDFFCKLIDTLRESAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLL--EDIND----DIEFALKLAKEESVIV  378 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v  378 (419)
                      ++.   ..++.++..+++.+.|+    ++|.+.  ....-|.+..+.+.....  .....    ...+...+ .++||++
T Consensus       346 ~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~--~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~  419 (461)
T PRK07482        346 REN---LVGNAAEVGAYFRARLRAAFGDHPLVG--EVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAA-LERGVIA  419 (461)
T ss_pred             hCC---HHHHHHHHHHHHHHHHHHHHhcCCCEE--EEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHH-HHCCcEE
Confidence            222   22333444444444443    343222  123446676777742110  00000    13445455 5689998


Q ss_pred             ecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          379 TPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       379 ~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .++.   ..+.+|+.+  ..++++|+++++.+.+++++..+
T Consensus       420 ~~~~---~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~  457 (461)
T PRK07482        420 RAMP---HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLG  457 (461)
T ss_pred             ecCC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            6532   136789886  57999999999999999987643

>PRK07678 aminotransferase; Validated

Probab=99.83  E-value=3.2e-17  Score=157.46  Aligned_cols=353  Identities=13%  Similarity=0.071  Sum_probs=209.9

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|.-... .-.-+|.+.+++.+++.......  .. ...+....+++.+.+..+   ..+.++++++
T Consensus        41 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~--~~-~~~~~~~~lae~l~~~~~---~~~~v~f~~s  113 (451)
T PRK07678         41 VTDIQGNRYLDGMSGLWCVN-VGYGRKELAEAAYEQLKTLSYFP--LT-QSHEPAIKLAEKLNEWLG---GEYVIFFSNS  113 (451)
T ss_pred             EEeCCCCEEEEccccHHhhc-CCCCCHHHHHHHHHHHHhcCccc--cc-cCCHHHHHHHHHHHHhCC---CCCEEEEeCC
Confidence            33456999999988843321 12357999999999987643211  11 112334445555544322   1358999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCccc------
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEV------  168 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~------  168 (419)
                      +++|++.+++....       +| .+|+....+|++....+.....             .+..++.  ...+..      
T Consensus       114 GseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  191 (451)
T PRK07678        114 GSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPP--PDCYRMPGIESE  191 (451)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCC--CccccccccCCh
Confidence            99999999887642       23 5789999999986544432211             1111111  111111      


Q ss_pred             ---C---hHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769          169 ---D---LDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       169 ---~---~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                         +   ++.+++.+.   .+..+.+|..| +.-.|. ..|.++++++.++|++||+++|+||++.+|...|..+ ....
T Consensus       192 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~  270 (451)
T PRK07678        192 DIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMN  270 (451)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHh
Confidence               1   223455553   23455667777 444555 4789999999999999999999999999876555321 2223


Q ss_pred             cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccchH
Q 014769          238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      ++..+.++   +++|.++...+++|.+++++        ++++.+...       ...+++.++++..++.+.|+...++
T Consensus       271 ~gv~PDiv---t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~  339 (451)
T PRK07678        271 YGVKPDII---TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENE  339 (451)
T ss_pred             cCCCCCEE---EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhC
Confidence            33333344   57899544337999999976        577766531       2345677888888888888764322


Q ss_pred             HHHHHHHHHHHHHHHHHHHh----hcCCCCCCCCCCCceEEEEeecCcccccCCC-C---HHHHHHHHHHhcCeEeecCC
Q 014769          311 FFCKLIDTLRESAEICYDGV----KEIPCISCPNKPEGSMVTMVKLNPWLLEDIN-D---DIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~-~---~~~~~~~ll~~~gv~v~~g~  382 (419)
                      .   ..++++++.+++.+.|    ++++.+..  ...-|.++-+.+......... +   ...+...+ .++||++.+..
T Consensus       340 ~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~--vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l-~~~Gv~~~~~g  413 (451)
T PRK07678        340 N---LIERSAQLGELLLEQLKEELGEHPLVGD--IRGKGLLVGIELVNDKETKEPADNDKVASVVAAC-KEKGLIIGKNG  413 (451)
T ss_pred             C---HHHHHHHHHHHHHHHHHHHHhcCCCEEE--EEeeceEEEEEEecCCcccCcCchHHHHHHHHHH-HHCCcEEeecC
Confidence            2   2334444444444444    33432221  223455555656321100000 1   23445455 56799997642


Q ss_pred             CC--CCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          383 YV--GLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       383 ~~--~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ..  ...+.+|+++.  .++++|+++++++.++++++
T Consensus       414 ~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        414 DTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI  450 (451)
T ss_pred             ccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence            11  22467999984  59999999999999999764

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.83  E-value=2.6e-17  Score=157.91  Aligned_cols=351  Identities=15%  Similarity=0.106  Sum_probs=205.2

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC--CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      ..+|+.+|||..|..... .-.-+|.+.+++.+++......  .|..+    +....+++.+.+..  +...+.++++++
T Consensus        49 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~----~~~~~lae~L~~~~--p~~~~~v~f~~S  121 (457)
T PRK05639         49 DVDGNVFIDFLAGAAAAS-TGYSHPKLVKAVQEQVALIQHSMIGYTHS----ERAIRVAEKLAEIS--PIENPKVLFGLS  121 (457)
T ss_pred             eCCCCEEEECCcCHHhhc-cCCCCHHHHHHHHHHHHhccccccCccCC----HHHHHHHHHHHhhC--CCCcCEEEEeCc
Confidence            345889999988843221 1235789999999998753221  22222    33334444444322  222368999999


Q ss_pred             HHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCC--cc----cCh---
Q 014769          116 CKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERN--WE----VDL---  170 (419)
Q Consensus       116 ~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~~~---  170 (419)
                      +++|++.+++....  ...+|+....+|++....+... +.             .+..++......  +.    .+.   
T Consensus       122 GsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  201 (457)
T PRK05639        122 GSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL  201 (457)
T ss_pred             hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHH
Confidence            99999999988642  2367888899999865433221 11             122222211000  00    012   


Q ss_pred             -----HHHHHhh-----cCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          171 -----DAVEALA-----DKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       171 -----~~l~~~~-----~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                           +.+++.+     ..+..+.+|..| +...|. ..|.++++++.++|++||+++|+||++.++...|..+. ...+
T Consensus       202 ~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~  280 (457)
T PRK05639        202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFA-SEWF  280 (457)
T ss_pred             HHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHH-HHhc
Confidence                 2344433     123455666777 455566 56899999999999999999999999998655554221 1222


Q ss_pred             CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                      +..++++   +++|.+ ..|+++|.+++++        ++++........+++.++++..++.+.|+....+.   ..++
T Consensus       281 gv~PDiv---~~gK~l-~gG~pi~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~---l~~~  345 (457)
T PRK05639        281 EVKPDLI---IFGKGV-ASGMGLSGVIGRK--------ELMDLTSGSALLTPAANPVISAAAEATLEIIEEEN---LLKN  345 (457)
T ss_pred             CCCCCEE---Eechhh-cCCCcceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHcc---HHHH
Confidence            3223333   378995 4589999999865        45552211112345667777777777776533222   2233


Q ss_pred             HHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc-ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEE
Q 014769          319 LRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL-LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA  393 (419)
Q Consensus       319 ~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris  393 (419)
                      .+++.+++.+.|++    .+-+.  ....-|.++.+.+.... .+.......+...+ .++|+++.+...  ..+.+|+.
T Consensus       346 ~~~~g~~l~~~L~~l~~~~~~~~--~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~g~--~~~~lr~~  420 (457)
T PRK05639        346 ALKVGEFIKKRLLEMKESFEVIG--DVRGKGLMIGVEIVKENGKPDPELTGKICWRA-FELGLILPSYGM--FGNVIRIT  420 (457)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEE--eeccceeEEEEEEecCCCCCCHHHHHHHHHHH-HhCCeEEeecCC--CCCEEEEe
Confidence            33444444444443    32121  12344666666653211 00000123444444 567999976421  14789999


Q ss_pred             e--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          394 F--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       394 ~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +  ..+++++++++++++++++...
T Consensus       421 Ppl~it~~~id~~~~~l~~~l~~~~  445 (457)
T PRK05639        421 PPLVITKEIAEKGLEIMERAIKDAL  445 (457)
T ss_pred             CCCccCHHHHHHHHHHHHHHHHHHH
Confidence            8  4699999999999999998764

>PLN02880 tyrosine decarboxylase

Probab=99.83  E-value=3.8e-17  Score=157.79  Aligned_cols=324  Identities=12%  Similarity=0.059  Sum_probs=211.5

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCC-----CCcEEEcccHHHHHHHHHHHhcC-----------CCCeEEeeCCCCC
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLS-----ADDVYVTLGCKQAVEVILSVLAR-----------PGANVLLPRPGWP  142 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~t~g~~~al~~~~~~l~~-----------~gd~vlv~~p~~~  142 (419)
                      .|...++..++++.+.+|+.+.+|.+-.     ...-++|+|+|+++..++.+..+           +.-.|++.+-+|+
T Consensus       113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~  192 (490)
T PLN02880        113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS  192 (490)
T ss_pred             ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence            4444557789999999999998886532     13467889999998777765432           1124556778899


Q ss_pred             CcHHHHhhcCCE---EEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769          143 YYEGIAQRKQVE---VRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR  213 (419)
Q Consensus       143 ~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  213 (419)
                      ++...+..+|+.   ++.++++..+++.+|++.|++++.+.      +.+|+.+-.+..||.+-|   +++|.++|+++|
T Consensus       193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~  269 (490)
T PLN02880        193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG  269 (490)
T ss_pred             HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence            999999999985   67888765556789999999988531      334455566788999988   999999999999


Q ss_pred             CeEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc---
Q 014769          214 VMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY---  289 (419)
Q Consensus       214 ~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~---  289 (419)
                      +|+++|.+|+++....... ..+..+..  -.-+..+++|+ +.....+|++.+++..      .+...+.....+-   
T Consensus       270 iwlHVDaA~gg~~~~~~~~~~~l~gie~--aDSit~d~HKw-l~~P~~~g~llvr~~~------~l~~~~~~~~~Yl~~~  340 (490)
T PLN02880        270 MWFHVDAAYAGSACICPEYRHYIDGVEE--ADSFNMNAHKW-FLTNFDCSLLWVKDRN------ALIQSLSTNPEFLKNK  340 (490)
T ss_pred             CEEEEehhhHHHHHhCHHHHHHhcCchh--cCEEEECchhh-cCCCccEEEEEEeCHH------HHHHHHccCHHHhcCc
Confidence            9999999999864321111 01111111  12455689998 5777889999997632      1222222111100   


Q ss_pred             ------------cCC---chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          290 ------------SDI---PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       290 ------------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                                  ++.   .......+-..++....+.+.++.++..++.+++.+.|.+.++++++.+|..++ +.++++.
T Consensus       341 ~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~i-v~Fr~~~  419 (490)
T PLN02880        341 ASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSL-VCFRLVP  419 (490)
T ss_pred             cccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEE-EEEEEeC
Confidence                        000   000011111123333357778888888899999999999888888665556554 4456643


Q ss_pred             ccccCCC--C--HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHhc
Q 014769          355 WLLEDIN--D--DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       355 ~~~~~~~--~--~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .... ..  +  ..++.+++.++..+.+.+ ..+....++|+++.   +++++++.+++.|.+..+++..
T Consensus       420 ~~~~-~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~  487 (490)
T PLN02880        420 PKNN-EDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG  487 (490)
T ss_pred             CCCC-hhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            1100 00  0  134556665556666654 33444679999983   5679999999999998887654

>PRK07046 aminotransferase; Validated

Probab=99.83  E-value=1.8e-17  Score=158.79  Aligned_cols=345  Identities=14%  Similarity=0.117  Sum_probs=204.8

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|.-... .-..+|.+.+++.+++.......+.     .+....+++.+.+..    ..+.+.++++++
T Consensus        71 D~DG~~yiD~~~g~g~~~-lGh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGt  140 (453)
T PRK07046         71 DVDGHRYDDFCLGDTGAM-FGHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTAT  140 (453)
T ss_pred             eCCCCEEEEecccccccc-cCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHH
Confidence            345888999987743221 1235799999999999875432222     244555666555432    257899999999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc--CCEEEE---E-ec----cCC---CCcccChHHHHHhhcCCcc
Q 014769          118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK--QVEVRH---F-DL----LPE---RNWEVDLDAVEALADKNTA  182 (419)
Q Consensus       118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~--g~~~~~---~-~~----~~~---~~~~~~~~~l~~~~~~~~~  182 (419)
                      +|.+.+++.... .| ++|+....+|+++.......  +.....   . ..    ...   -.| -|++.+++.+..+..
T Consensus       141 EA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~v  219 (453)
T PRK07046        141 DANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDV  219 (453)
T ss_pred             HHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCe
Confidence            999999987643 23 78999999999874322110  000000   0 00    000   001 168888888864455


Q ss_pred             EEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          183 AMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       183 ~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      +.+|+.| ....| ...+.++++++.++|+++|+++|+||++. |..+-....  ..++..+.++   +++|.+ ..|++
T Consensus       220 Aavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~--~~~gv~PDi~---t~gK~l-ggG~P  292 (453)
T PRK07046        220 AAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYT--RAHGLEPDFL---VVGKPI-AGGVP  292 (453)
T ss_pred             EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchh--HHhCCCccce---eehhhh-cCCCc
Confidence            6677777 33334 45677899999999999999999999997 322111111  1122222233   578995 56899


Q ss_pred             eEEEEeeCCCCccchhhHHHHHHhh----------hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769          261 FGWLVTNDPNGIFQKSGIIDSIKDC----------LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      +|.+++++        ++++.+...          ...+++.++++..++.+.|+... .+.+++..+.-...++.+.+.
T Consensus       293 i~av~g~~--------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l  364 (453)
T PRK07046        293 CAVYGFSA--------ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAV  364 (453)
T ss_pred             ceeeeehH--------HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            99999876        577776521          12255678888888877776532 233333333333333334333


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccccCC------CC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDI------ND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSA  400 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~------~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~  400 (419)
                      +.+. ++.....-.+. .+.+.+........      .+   ...+...+ .++||++.|.     .+.+++++..++++
T Consensus       365 ~~~~-~~~~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~~~~~p~~t~~d  436 (453)
T PRK07046        365 IARH-GLPWHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYL-LNRGVLITPF-----HNMMLVCPATTAAD  436 (453)
T ss_pred             HHhC-CCCeEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHH-HHCCCEEecc-----cCcEEEeCCCCHHH
Confidence            3334 22211122223 33333321100000      01   12344445 4579999873     24678888899999


Q ss_pred             HHHHHHHHHHHHHHHh
Q 014769          401 LKDGLGRMKAFCQRHT  416 (419)
Q Consensus       401 l~~~l~~l~~~~~~~~  416 (419)
                      |+++++++++++++..
T Consensus       437 id~~~~~~~~~l~~~~  452 (453)
T PRK07046        437 VDRLVAAFDACLGELL  452 (453)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998764

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.83  E-value=4.2e-17  Score=156.72  Aligned_cols=362  Identities=11%  Similarity=0.024  Sum_probs=216.1

Q ss_pred             CchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHH
Q 014769           21 PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIA   94 (419)
Q Consensus        21 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia   94 (419)
                      ....|.+++.+-...     ....|+|--..      -..++.+++++...+.+....+      |+......++++...
T Consensus        18 ~d~~~~~~i~~e~~~-----q~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~   86 (475)
T PLN03226         18 VDPEIADIIEKEKRR-----QWKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQ   86 (475)
T ss_pred             cCHHHHHHHHHHHHH-----HHcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHH
Confidence            456677777643332     34456664443      2357888898888874322122      333333445554333


Q ss_pred             HHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCCeEEeeCC---CCCCcHHHH---hhcCCEEE----EEecc
Q 014769           95 DYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGANVLLPRP---GWPYYEGIA---QRKQVEVR----HFDLL  161 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd~vlv~~p---~~~~~~~~~---~~~g~~~~----~~~~~  161 (419)
                      +...+.++  ...+.+.+   .++++.|+..++.++++|||+|+..+.   +|..+....   ...+....    .+.++
T Consensus        87 ~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~  164 (475)
T PLN03226         87 KRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLD  164 (475)
T ss_pred             HHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeec
Confidence            33333333  23334333   478899999999999999999998553   333322111   11112211    33444


Q ss_pred             CCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccC
Q 014769          162 PERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFG  239 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~  239 (419)
                      + .+..+|++.|++.+.. +++.| ++..++ +|...+   +++|.++|+++|+++++|++|..........+ ++.   
T Consensus       165 ~-~~g~iD~d~Le~~l~~~~pklI-v~~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~---  235 (475)
T PLN03226        165 E-STGLIDYDKLEKKAMLFRPKLI-IAGASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE---  235 (475)
T ss_pred             C-CCCCcCHHHHHHHHhhcCCeEE-EEecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC---
Confidence            3 3457999999998864 45544 443444 677777   77899999999999999999987655433221 121   


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCC-cc-----chhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNG-IF-----QKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDF  311 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~-~~-----~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~  311 (419)
                        ...++++|++|++  .|.+.|++++++... ..     ...++.+.++...  .+.++++.....++..+++......
T Consensus       236 --~~Div~~t~hK~L--~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~  311 (475)
T PLN03226        236 --YCDVVTTTTHKSL--RGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPE  311 (475)
T ss_pred             --CCeEEEecCcccc--cCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcC
Confidence              1238889999985  344458888854210 00     0001222222221  2334455555556666666543344


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----C
Q 014769          312 FCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----L  386 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~  386 (419)
                      .++.++++.++.+.+.+.|.+. |+.++........+++.+....    .+..++ ...|++.||.+..+.-++     .
T Consensus       312 ~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~~~g----i~~~~~-~~~L~~~~I~~nk~~~p~~~~~~~  385 (475)
T PLN03226        312 FKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLRPLG----LTGSRV-EKVLDLAHITLNKNAVPGDSSALV  385 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEccCCC----CCHHHH-HHHHHHCCCEECCCCCCCCcccCC
Confidence            5677889999999999999885 8874432233456667774321    134444 455578999998765332     2


Q ss_pred             CCeEEEEe------ecCHHHHHHHHHHHHHHHHH
Q 014769          387 KNWLRIAF------CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       387 ~~~~Ris~------~~~~~~l~~~l~~l~~~~~~  414 (419)
                      ++.+|++.      +.++++++++.+.|.++++.
T Consensus       386 ~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~  419 (475)
T PLN03226        386 PGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI  419 (475)
T ss_pred             CCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence            46789865      35789999999999999873

>PRK05965 hypothetical protein; Provisional

Probab=99.82  E-value=1.6e-17  Score=159.81  Aligned_cols=354  Identities=14%  Similarity=0.119  Sum_probs=213.8

Q ss_pred             hhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           35 SVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        35 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      .+...+|+.+|||..|..... .-.-+|.+.+++.+++....+ ..+.  ....+.+..+++.+.+..  +.+.+.++++
T Consensus        39 ~l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~  113 (459)
T PRK05965         39 TLTDASGHQLLDAFAGLWCVN-VGYGQESIVEAAAEQMRELPYATGYF--HFGSEPAIRLAAKLAERA--PGSLNHVYFT  113 (459)
T ss_pred             EEEECCCCEEEECcccHHhcc-CCCCCHHHHHHHHHHHHhcCCccccc--ccCCHHHHHHHHHHHhhC--CCCcCEEEEe
Confidence            344456999999988843321 123579999999999876432 1110  011234445555554422  2234689999


Q ss_pred             ccHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CC------------EEEEEeccCCCC--cccC-
Q 014769          114 LGCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QV------------EVRHFDLLPERN--WEVD-  169 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~--~~~~-  169 (419)
                      +++++|++.+++....       ++ .+|+....+|++....+... +.            .+..++......  +.-+ 
T Consensus       114 ~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (459)
T PRK05965        114 LGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP  193 (459)
T ss_pred             CChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence            9999999999987542       22 57999999999864322211 11            011222110000  0112 


Q ss_pred             -------hHHHHHhhcC---CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769          170 -------LDAVEALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       170 -------~~~l~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                             ++.+++.+..   +..+.+|..| +...|. +.|.++++++.++|++||+++|.||++.+|...|..+ ....
T Consensus       194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~  272 (459)
T PRK05965        194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEA  272 (459)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhh
Confidence                   2456666642   3445566666 555565 5789999999999999999999999999986666432 2233


Q ss_pred             cCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-------h-hccccCCchHHHHHHHHHHcccc
Q 014769          238 FGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-------C-LSIYSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~~~a~~~~l~~~~  308 (419)
                      ++..+.++   +++|.+ ..| +++|.+++++        ++.+.+..       . ...+++.++++..++.+.|+...
T Consensus       273 ~gv~PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~  340 (459)
T PRK05965        273 EGVVPDLM---TVAKGL-TSGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH  340 (459)
T ss_pred             cCCCCCeE---Eechhh-ccCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence            34333344   468995 567 5999999976        56666642       1 22356778888888888776533


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCccc-c-cCCC---C-HHHHHHHHHHhcCeEee
Q 014769          309 EDFFCKLIDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWL-L-EDIN---D-DIEFALKLAKEESVIVT  379 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~-~-~~~~---~-~~~~~~~ll~~~gv~v~  379 (419)
                      ++.   ..++.++..+++.+.|+++   |.+.  ....-|+++-+.+.... . ....   . ...+...+ .++||++.
T Consensus       341 ~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gll~~  414 (459)
T PRK05965        341 EGG---LLANGQKAGPRFAAGLDALRAHPLVG--DVRGRGLLGALELVADKATKTPFDAALDPADRIFDRA-YANGLVFR  414 (459)
T ss_pred             hcc---HHHHHHHHHHHHHHHHHhhccCCCEE--EEeecceEEEEEEeccccccCCCCchhHHHHHHHHHH-HhCCeEEE
Confidence            222   2334455555555555543   3222  12334666666663211 0 0000   0 12344444 56899997


Q ss_pred             cCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          380 PGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       380 ~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +..    ...+|+.+  ..++++++++++++.+++.+..
T Consensus       415 ~~g----~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~  449 (459)
T PRK05965        415 AFG----DGVLGFAPALCCTEGEFDLIFERTRKTLDDVL  449 (459)
T ss_pred             ecC----CcEEEEECCCcCCHHHHHHHHHHHHHHHHHHh
Confidence            632    46789887  4799999999999999998763

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.82  E-value=1.5e-17  Score=159.50  Aligned_cols=352  Identities=12%  Similarity=0.015  Sum_probs=212.4

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|.-... .-.-+|.+.+++.+++.......  ...-..+.+..+++.+.+..+  ...+.++++++
T Consensus        48 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~s  122 (453)
T PRK06943         48 LYDRDGRRYLDAISSWWVNL-FGHANPRINAALKDQLDTLEHAM--LAGCTHEPAIELAERLAALTG--GTLGHAFFASD  122 (453)
T ss_pred             EEeCCCCEEEEcchHHHHhc-CCCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCC
Confidence            33446889999988832211 12357999999999987642111  000112344555555544322  12258999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCC--cc-----
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERN--WE-----  167 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~-----  167 (419)
                      +++|++.+++....       +| .+|+....+|++....+.....             .+..++......  +.     
T Consensus       123 GseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  202 (453)
T PRK06943        123 GASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAAD  202 (453)
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHH
Confidence            99999999988621       23 6799999999886432222111             111222111000  00     


Q ss_pred             ---cChHHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          168 ---VDLDAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       168 ---~~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                         -+++.+++.+..  +..+.+|..|  +...|. ..|.++++++.++|++||+++|.||++.++...|..+ ....++
T Consensus       203 ~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f-a~~~~g  281 (453)
T PRK06943        203 VAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF-ACEQAG  281 (453)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh-HHHhCC
Confidence               123556666642  3445566666  555666 5799999999999999999999999999886555432 222333


Q ss_pred             CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccchHH
Q 014769          240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKEDF  311 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~  311 (419)
                      ..+.++   +++|.++ .| +++|.+++++        ++.+.+...       ...+++.++++..++.+.|+...++.
T Consensus       282 v~PDiv---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~  349 (453)
T PRK06943        282 VWPDFL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDD  349 (453)
T ss_pred             CCCCeE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            333445   4679954 68 5999999976        566666421       22356678888888888877643222


Q ss_pred             HHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCC
Q 014769          312 FCKLIDTLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKN  388 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~  388 (419)
                         ..++.+++.+++.+.|++   .+.+..  ...-|+++-+.+.............+...+ .++||++.+..     +
T Consensus       350 ---l~~~~~~~G~~l~~~L~~l~~~~~v~~--vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~-~~~Gll~~~~g-----~  418 (453)
T PRK06943        350 ---VLARNARKSARLRAALAPLAAHPQVRH--LRQRGTIFAFDVALDGDAARTFSRRFFEAA-LERELLLRPIG-----T  418 (453)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHhcCCCEEe--EeccccEEEEEEccCCCcchHHHHHHHHHH-HHCCcEEEecC-----C
Confidence               233444444445554443   343331  234466666666421100000123445555 56899997642     4


Q ss_pred             eEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          389 WLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       389 ~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .+|+++  ..++++|++++++|.+++++..
T Consensus       419 ~l~~~Ppl~it~~eid~~~~~l~~al~~~~  448 (453)
T PRK06943        419 TVYLMPPYVLDDDEIAWLAERTRATLDATL  448 (453)
T ss_pred             EEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence            689996  5799999999999999998764

>PLN02590 probable tyrosine decarboxylase

Probab=99.82  E-value=6.3e-17  Score=156.22  Aligned_cols=327  Identities=14%  Similarity=0.108  Sum_probs=212.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhhCCCCCC-----CCcEEEcccHHHHHHHHHHHhcC-----------CCCeEEeeCCCC
Q 014769           78 NCYATNSGIPPARRAIADYLSRDLPYKLS-----ADDVYVTLGCKQAVEVILSVLAR-----------PGANVLLPRPGW  141 (419)
Q Consensus        78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~t~g~~~al~~~~~~l~~-----------~gd~vlv~~p~~  141 (419)
                      ..|...++..++++.+.+|+.+.+|.+-.     ...-++++|+|+++..++.+...           +.-.|++.+.+|
T Consensus       160 ~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH  239 (539)
T PLN02590        160 FTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTH  239 (539)
T ss_pred             CCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCch
Confidence            35555668899999999999998886532     13467789999988777665432           112455667889


Q ss_pred             CCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769          142 PYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINPGNPCGNVFTYHHLQEIAEMARKL  212 (419)
Q Consensus       142 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  212 (419)
                      +++...+..+|+   .++.++++...++.+|++.|++++.+.      +.+|+.+-.+..||.+=|   +++|.++|+++
T Consensus       240 ~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~  316 (539)
T PLN02590        240 SSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKKY  316 (539)
T ss_pred             HHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh
Confidence            999999999998   477888765556789999999988542      334555566778999877   99999999999


Q ss_pred             CCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh---h--
Q 014769          213 RVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC---L--  286 (419)
Q Consensus       213 ~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~---~--  286 (419)
                      |+|+++|.+|+++..-...... +..+... .-| ..+++|+ +.....+|.+.++++..      +.+.+...   .  
T Consensus       317 g~WlHVDaA~GG~al~~~~~r~~~~Gie~A-DSi-t~D~HK~-l~~p~~cg~llvr~~~~------l~~a~~~~~~YL~~  387 (539)
T PLN02590        317 GIWLHVDAAYAGNACICPEYRKFIDGIENA-DSF-NMNAHKW-LFANQTCSPLWVKDRYS------LIDALKTNPEYLEF  387 (539)
T ss_pred             CCeEEEecchhhhhhcChhhHHHhcCCccC-CEE-EECchhh-cCcCcCEEEEEecCHHH------HHHHhhcCHHHhCC
Confidence            9999999999986532221111 1122111 123 3379998 57778899999887431      22222110   0  


Q ss_pred             ------------ccccCCc-hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769          287 ------------SIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN  353 (419)
Q Consensus       287 ------------~~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~  353 (419)
                                  ..+...+ ......+-..|+....+.++++.++..+..+++.+.|++.|+++++.+|.-+..+ +++.
T Consensus       388 ~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVc-Fr~~  466 (539)
T PLN02590        388 KVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVC-FRLA  466 (539)
T ss_pred             cccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEE-EEec
Confidence                        0000000 1112222233333335788999999999999999999998889866555555443 4443


Q ss_pred             cccccCC---CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHhcc
Q 014769          354 PWLLEDI---NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       354 ~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      .......   .-..++.+++.+...+.+.+ .......++|++++   +++++|+.+++.|.+...++.+.
T Consensus       467 ~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~-t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~~  536 (539)
T PLN02590        467 PVDGDEDQCNERNRELLAAVNSTGKIFISH-TALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTRN  536 (539)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhCCCEEEEe-eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence            2100000   00235555664444444444 43444568999983   57899999999999998887654

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.82  E-value=7.4e-18  Score=157.47  Aligned_cols=281  Identities=14%  Similarity=0.106  Sum_probs=179.8

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~  159 (419)
                      +...+|++.++++.        +.+..+++++++.|+..++.++.++||+|+++.+.|....    ..+...|+++.+++
T Consensus        64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd  135 (384)
T PRK06434         64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID  135 (384)
T ss_pred             hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence            34578888898887        3357888999999999999999999999999988776543    55677899999888


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      +++.+.+.++        .+++++|++.+|+|||+.+.+   +++|.++|++++  +++|.++.... .+   .++. .+
T Consensus       136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~-~~---~pl~-~g  197 (384)
T PRK06434        136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPY-NQ---NPLD-LG  197 (384)
T ss_pred             CCChhheeec--------CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcc-cC---Cchh-cC
Confidence            6532222222        125789999999999999887   999999999998  46699975321 11   1222 23


Q ss_pred             CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                      .   .+++.|.+|.++.+| .-.|.++++++       ++.+.++... ......++...+.+..-|     +.+..+.+
T Consensus       198 a---Divv~S~tK~i~G~~d~~gG~vv~~~~-------~~~~~~~~~~~~~G~~~~~~~A~l~~~gL-----~tL~~R~~  262 (384)
T PRK06434        198 A---DVVIHSATKYISGHSDVVMGVAGTNNK-------SIFNNLVERRKTLGSNPDPIQAYLALRGL-----KTLGLRME  262 (384)
T ss_pred             C---CEEEeecccccCCCCCceEEEEecCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhCC-----CcHHHHHH
Confidence            3   388889999976655 44566665442       4556555443 223333433322222222     34677777


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCC----------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC---
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPE----------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV---  384 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---  384 (419)
                      +.+++...+.+.|+.+|.+..|..|.          .|-.+.+.++..     .....|++.| +-..+.++-|...   
T Consensus       263 r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~-----~~~~~f~~~l-~l~~~~~slG~~~sl~  336 (384)
T PRK06434        263 KHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSM-----EDVHKFIRNL-EIPMVAASLGGVESLI  336 (384)
T ss_pred             HHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCH-----HHHHHHHHhC-CcceEccCCCCCCeee
Confidence            88888999999999888776555554          233445556421     1233444433 2222222222210   


Q ss_pred             -------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          385 -------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       385 -------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                                         +. ++.+|||+|.+  +.+.+++.|.+++.
T Consensus       337 ~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlE--d~~dLi~dl~~Al~  383 (384)
T PRK06434        337 TLPVETSHSSLSPEERERLGISDNLVRFSIGIE--DIDDLIKDIENALS  383 (384)
T ss_pred             ECCCccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHhc
Confidence                               00 35799999974  56667777777664

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.82  E-value=1.4e-17  Score=169.61  Aligned_cols=308  Identities=11%  Similarity=0.059  Sum_probs=213.3

Q ss_pred             CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH----HHHHHHHHHhcCC-CC----eEEeeCCCCCCcHHHHhhcCC
Q 014769           83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK----QAVEVILSVLARP-GA----NVLLPRPGWPYYEGIAQRKQV  153 (419)
Q Consensus        83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~----~al~~~~~~l~~~-gd----~vlv~~p~~~~~~~~~~~~g~  153 (419)
                      .+|+.++...+.+++.+..|.    +.|.++++++    ++++.+++.+.++ ||    .|+++...|......+...|+
T Consensus       563 ~~g~~~~~~~~r~~la~i~g~----~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~  638 (993)
T PLN02414        563 AQGYQEMFEDLGDLLCEITGF----DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGM  638 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHhCC----CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCC
Confidence            356655555555555554443    8999999999    8999999998765 88    899999999988888888999


Q ss_pred             EEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC
Q 014769          154 EVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI  230 (419)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~  230 (419)
                      +++.++++.  +..+|+++|++++++   ++++|++++|+|-+|...+   +++|+++|+++|+++++|.++.....   
T Consensus       639 ~vv~v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~---  710 (993)
T PLN02414        639 KIVVVGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQV---  710 (993)
T ss_pred             EEEEeccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCHHhcc---
Confidence            999999853  347999999999984   6788999999999999988   99999999999999999999965221   


Q ss_pred             CCCCccccCCCCcEEEEecCCCcCCC----CCceeEEEEeeCCCCccchhhHHHHHHh------------hhcc-ccC--
Q 014769          231 PYTPMGLFGSIVPVITLGSISKRWLV----PGWRFGWLVTNDPNGIFQKSGIIDSIKD------------CLSI-YSD--  291 (419)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~l~~------------~~~~-~~~--  291 (419)
                      .......++.+   ++++|.+|+|+.    .|..+|++.++..        +...+-.            .... .++  
T Consensus       711 ~l~~p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~  779 (993)
T PLN02414        711 GLTSPGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKH--------LAPFLPSHPVVPTGGIPRPEKTQPLGTIS  779 (993)
T ss_pred             CcCCccccCCC---EEEecCCccCCcCcccCCCCeeeEEEchh--------hcccCCCCccccCCCcccccCCCCcCCcc
Confidence            11222344444   888899997663    3566999988652        1111110            0100 112  


Q ss_pred             ----CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE--EEEeecCcccccCCCCHHH
Q 014769          292 ----IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM--VTMVKLNPWLLEDINDDIE  365 (419)
Q Consensus       292 ----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~--~~~~~~~~~~~~~~~~~~~  365 (419)
                          .+.....++..++.....+.+.+..++...+.+++.+.|.+..++. +..|.+.+  -+.+.++..+-....+..+
T Consensus       780 ~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~-~~~~~~~~~hEfv~~~~~l~~~~g~~~~d  858 (993)
T PLN02414        780 AAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL-FRGKNGTCAHEFIIDLRPFKNTAGIEPED  858 (993)
T ss_pred             chhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCeeeeEEEeccccccccCCCHHH
Confidence                1223333444555554568888889999999999999998743443 22333321  1223343111001124578


Q ss_pred             HHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          366 FALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       366 ~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +.++|+ ++||.... ..|-..+++|+++.  .+++|||++++.+..+..+..
T Consensus       859 i~krL~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~  909 (993)
T PLN02414        859 VAKRLM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIA  909 (993)
T ss_pred             HHHHHH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence            888886 88997644 33545789999994  588999999999998887654

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.82  E-value=5.2e-18  Score=144.38  Aligned_cols=328  Identities=16%  Similarity=0.191  Sum_probs=214.0

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV  122 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~  122 (419)
                      ..+||.....     ..+..+++++|.++....+.  |+......+|++.+|+...       +...+|+++|++..+..
T Consensus        22 ~~vDLRSDTv-----T~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~G-------KEAgLFv~SGTmgNlla   87 (384)
T KOG1368|consen   22 RSVDLRSDTV-----TVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFG-------KEAGLFVPSGTMGNLLA   87 (384)
T ss_pred             eccccccccc-----cCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhC-------ccceeeecccccccHHH
Confidence            4456665543     34568889999888665555  5554566899999999983       34456777777776666


Q ss_pred             HHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--------CccEEEEeCCCC
Q 014769          123 ILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--------NTAAMVIINPGN  191 (419)
Q Consensus       123 ~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~i~~p~n  191 (419)
                      ++..+-++|.+|++.+-+|....   .+....|+.+..  +.++++..+++++++++++.        -++++.+.|-+|
T Consensus        88 Im~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~t--v~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~  165 (384)
T KOG1368|consen   88 IMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRT--VKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHN  165 (384)
T ss_pred             HHHHhcCCCceEEeccchheeehhccChhhhccceeEe--eeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecccc
Confidence            66667779999999988875322   233444555554  44666778999999999873        357788888866


Q ss_pred             ccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769          192 PCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN  270 (419)
Q Consensus       192 ptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  270 (419)
                      .+| .++|.+++.++.++|+++++-+..|.+--+-.--. .-.++..+......+.+ +|||.++.|   +|-+++.+. 
T Consensus       166 ~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAava-sgV~vk~i~~~fDSVsi-CLSKglgAP---VGSViVG~k-  239 (384)
T KOG1368|consen  166 NCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVA-SGVPVKKICSAFDSVSI-CLSKGLGAP---VGSVIVGSK-  239 (384)
T ss_pred             ccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHH-cCCCHHHHHHhhhhhhh-hhhccCCCC---cccEEEccH-
Confidence            555 99999999999999999999999998765421111 11222222111111222 789997555   788777552 


Q ss_pred             CccchhhHHHHHHhhh-ccccCC--chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CceE
Q 014769          271 GIFQKSGIIDSIKDCL-SIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-EGSM  346 (419)
Q Consensus       271 ~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~~g~  346 (419)
                            +++++-+.++ .+.++.  +.+..+|+.-+|++    .+. ....-+++...+.+.+...+++. +..| ....
T Consensus       240 ------~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~----~~~-~L~~dHk~A~~lAe~~~~~~~i~-v~v~a~etN  307 (384)
T KOG1368|consen  240 ------DFIDKARHFRKALGGGMRQSGVLAAAALVALDE----NVP-LLRADHKRAKELAEYINTPEEIR-VEVPAVETN  307 (384)
T ss_pred             ------HHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc----chH-HHHHHHHHHHHHHHHhcccccee-eecchhhcc
Confidence                  4666655553 223333  33333333334433    122 34455667777788887765666 3344 5566


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHH-HHHH
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMK-AFCQ  413 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~-~~~~  413 (419)
                      ++.+.+....    .+..++...+ +++||.+.++..    ..+|+.+.  .++++++.++..+. .++.
T Consensus       308 iv~~~l~q~~----~~~~~l~~~~-~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~  368 (384)
T KOG1368|consen  308 IVNMVLCQAR----LTAEELCKFL-EKNGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSKKFLK  368 (384)
T ss_pred             eeeeeccccc----CCHHHHHHHH-HHCCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHHHHHh
Confidence            7776664432    2677887776 778999998764    34799984  58999999999994 4443

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.82  E-value=1.1e-17  Score=155.59  Aligned_cols=330  Identities=12%  Similarity=0.068  Sum_probs=206.2

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC--CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      ..+|+.++||..|.-... .-.-+|.+.+++.+++++....  .|.. ....++.+.++++.        ..+.++++++
T Consensus        20 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~S   89 (364)
T PRK04013         20 DSQGRRYLDLIAGIGVNV-LGHNHPEWVEEMSEQLEKLVVAGPMFEH-EEKEEMLEELSKWV--------NYEYVYMGNS   89 (364)
T ss_pred             ECCCCEEEEcccChhhcc-CCCCCHHHHHHHHHHHHhcCCccCCcCC-HHHHHHHHHHHhhc--------CCCEEEEeCc
Confidence            346899999988743221 1235688999999998764221  2222 22234455555443        2368999999


Q ss_pred             HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCCEE----EEEeccCCC--CcccChHHHHHhhcCCccEEEEe
Q 014769          116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQVEV----RHFDLLPER--NWEVDLDAVEALADKNTAAMVII  187 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~~~----~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~i~  187 (419)
                      +++|++.+++.... +| ++|+....+|++....+.......    ..-+..++-  ..-.|.+.+++.+.++..++++.
T Consensus        90 GseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~aAvivE  169 (364)
T PRK04013         90 GTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKETAAVIFE  169 (364)
T ss_pred             hHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhcCCcEEEEEc
Confidence            99999999998643 45 889999999988654333211000    000000000  00126778888887666665555


Q ss_pred             CCCCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          188 NPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       188 ~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      ..+...|. ..|.++++++.++|+++|+++|+||++.++ ..|..+ ....++-.++++   +++|.++ .|+++|.++.
T Consensus       170 pi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~gv~PDiv---~~gK~lg-gG~P~~a~~~  243 (364)
T PRK04013        170 PIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYKVEPDIV---TMGKGIG-NGVPVSLTLT  243 (364)
T ss_pred             CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcCCCCCEE---Eeccccc-CCceeEEEEe
Confidence            44555555 568899999999999999999999999987 555422 222333333344   5689964 5899999988


Q ss_pred             eCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 014769          267 NDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM  346 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  346 (419)
                      +.        ++. .  .....+++.++++..++.+.|+...++.+.++.   ++.   + +.+.. +.+.  ....-|+
T Consensus       244 ~~--------~~~-~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~---~~~---l-~~l~~-~~v~--~vRG~Gl  302 (364)
T PRK04013        244 NF--------DVE-R--GKHGSTFGGNPLACKAVAVTLRILRRERLVEKA---GEK---F-IEIKG-ERVV--TTRGRGL  302 (364)
T ss_pred             cc--------ccc-C--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHH---HHH---H-HHhcc-Ccce--eeeeCcE
Confidence            65        221 1  112335678888888888888764333222222   111   2 12222 2222  1234477


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +.-+.+..       +...+...+ .++|+++.+..    .+.+|+.+  ..+++++++++++|++++.+..
T Consensus       303 ~~gve~~~-------~~~~i~~~~-~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~  362 (364)
T PRK04013        303 MIGIVLKK-------PVGKYVEEL-QNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL  362 (364)
T ss_pred             EEEEEeCC-------cHHHHHHHH-HhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence            77777742       234555555 56899987642    37899998  4689999999999999998764

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.82  E-value=5.9e-17  Score=155.07  Aligned_cols=352  Identities=16%  Similarity=0.116  Sum_probs=208.0

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.++||..|.-... .-.-+|.+.+++.+++.+...  ........+.+..+++.+.+..+  ...+.++++++++
T Consensus        42 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGs  116 (442)
T PRK13360         42 THDGRRVLDGTAGLWCVN-AGHGRPEIVEAVRAQAGELDY--APAFQMGHPKAFELANRIAEIAP--GGLNHVFFTNSGS  116 (442)
T ss_pred             eCCCCEEEECchhHHHhc-cCCCCHHHHHHHHHHHHhCCC--cccCCcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence            446899999988843221 123679999999999875321  11111112344455555544222  1236899999999


Q ss_pred             HHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-C------------CEEEEEeccCC--C-Cccc-----
Q 014769          118 QAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-Q------------VEVRHFDLLPE--R-NWEV-----  168 (419)
Q Consensus       118 ~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~--~-~~~~-----  168 (419)
                      +|++.+++....       ++ .+|+....+|++....+... |            ..+..++....  . .+..     
T Consensus       117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  196 (442)
T PRK13360        117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH  196 (442)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence            999999887542       22 57999999999864322211 1            01122221100  0 0111     


Q ss_pred             ---ChHHHHHhhc---CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          169 ---DLDAVEALAD---KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       169 ---~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                         ..+.+++.+.   .+..+.+++.| ....|.. .+.+++++|.++|+++|+++|+||++.++...|..+ ....++.
T Consensus       197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv  275 (442)
T PRK13360        197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF-AAQYFGV  275 (442)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCC
Confidence               1346666664   23345566777 4455664 689999999999999999999999998775545432 1122222


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccchHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKEDFF  312 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~  312 (419)
                      .+.++   +++|.++...+++|.+++++        ++.+.+...        ...+++.++++..++.+.|+...++  
T Consensus       276 ~PDiv---t~gK~l~gG~~P~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~--  342 (442)
T PRK13360        276 TPDLL---TCAKGLTNGAIPMGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE--  342 (442)
T ss_pred             CCcee---eeeeccccCccceEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC--
Confidence            22233   78999644337899988865        566655421        2235567888877777777653222  


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEE
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCISCPNK-PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLR  391 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~R  391 (419)
                       ...++++++.+++.+.|+++.....+.. ..-|++.-+.+............++...+ .++||++.++     .+.+|
T Consensus       343 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~-----~~~lr  415 (442)
T PRK13360        343 -GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKC-FEKGLMIRYT-----GDILA  415 (442)
T ss_pred             -CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHH-HHCCcEEEec-----CCEEE
Confidence             2344555566666666654322211111 22344444444321100011234566555 5679999764     25799


Q ss_pred             EEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          392 IAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       392 is~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +++  ..++++|++++++|.+++++.
T Consensus       416 ~~Ppl~~t~~eid~~~~~l~~~l~~~  441 (442)
T PRK13360        416 LSPPLIIEEAQIDELFDILAQALKET  441 (442)
T ss_pred             EeCCCccCHHHHHHHHHHHHHHHHHh
Confidence            997  478999999999999998764

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.82  E-value=2e-17  Score=157.38  Aligned_cols=347  Identities=13%  Similarity=0.078  Sum_probs=212.1

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.++||..|.-... .-.-+|.+.+++.+++..........  -..+.+..+++.+.+..+  .+.+.++++++
T Consensus        37 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~p--~~~~~v~f~~S  111 (428)
T PRK07986         37 LILADGRRLVDGMSSWWAAI-HGYNHPQLNAAMKSQIDAMSHVMFGG--ITHPPAIELCRKLVAMTP--QPLECVFLADS  111 (428)
T ss_pred             EEeCCCCEEEEcchhHHhhc-CCCCCHHHHHHHHHHHhhcCCccccc--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCC
Confidence            44456999999988843221 12357899999999987643211110  123445556666654332  23468999999


Q ss_pred             HHHHHHHHHHHhcC------C-CCeEEeeCCCCCCcHHHHhhc-CCE-------------EEEEeccCCC---Cc-ccCh
Q 014769          116 CKQAVEVILSVLAR------P-GANVLLPRPGWPYYEGIAQRK-QVE-------------VRHFDLLPER---NW-EVDL  170 (419)
Q Consensus       116 ~~~al~~~~~~l~~------~-gd~vlv~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~---~~-~~~~  170 (419)
                      +++|++.+++....      . ..+|+....+|++....+... +..             +..++.....   .+ .-|+
T Consensus       112 GsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~  191 (428)
T PRK07986        112 GSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDI  191 (428)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHH
Confidence            99999999887642      2 368999999998754333222 100             1111111000   00 1145


Q ss_pred             HHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          171 DAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       171 ~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      +.+++.+..  +..+.+++.|  +.-.|. ..+.+++++|.++|+++|+++|+||++.++...|..+ ....++..+.++
T Consensus       192 ~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f-a~~~~gv~PDi~  270 (428)
T PRK07986        192 APFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-ACEHAGIAPDIL  270 (428)
T ss_pred             HHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee-eecccCCCCCEE
Confidence            566666642  2344566666  444565 4578999999999999999999999998765555432 122233222333


Q ss_pred             EEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       246 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                         +++|.+ ..| +++|.+++++        ++++.+...      ...+++.++++..++.+.|+...++   +..++
T Consensus       271 ---t~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~---~~~~~  335 (428)
T PRK07986        271 ---CLGKAL-TGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG---DWQQQ  335 (428)
T ss_pred             ---Eechhh-hCCcccCcchhchH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHH
Confidence               589996 467 5888888865        577777542      2234567788888877777653222   23445


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--e
Q 014769          319 LRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--C  395 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~  395 (419)
                      ++++.+++.+.|+++.....+. ...-|++.-+.+...     .....+...+ .++||++.+.     .+.+|+.+  .
T Consensus       336 ~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~-----~~~~~~~~~l-~~~Gl~~~~~-----g~~i~~~Ppl~  404 (428)
T PRK07986        336 VAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRP-----VNMAALQRFF-VEQGVWIRPF-----GKLIYLMPPYI  404 (428)
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCc-----ccHHHHHHHH-HHCCcEEEec-----CCEEEEeCCCC
Confidence            5555566666665431111111 123366666666431     1234555555 6789999874     25899987  5


Q ss_pred             cCHHHHHHHHHHHHHHHHH
Q 014769          396 AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       396 ~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+++++++++++|.+++.+
T Consensus       405 it~~ei~~~~~~l~~~l~~  423 (428)
T PRK07986        405 ILPEQLQRLTAAVNRAVQD  423 (428)
T ss_pred             CCHHHHHHHHHHHHHHHhh
Confidence            7999999999999999865

>PLN02271 serine hydroxymethyltransferase

Probab=99.82  E-value=9.5e-17  Score=151.88  Aligned_cols=335  Identities=11%  Similarity=0.028  Sum_probs=217.9

Q ss_pred             ChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHHHHHhhCCCCCC-C-CcEEEcccHHHHHHHHHHHhcCCC
Q 014769           60 TAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAIADYLSRDLPYKLS-A-DDVYVTLGCKQAVEVILSVLARPG  131 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~-~~i~~t~g~~~al~~~~~~l~~~g  131 (419)
                      .++.+.+++...+.+....      .|+....+.+++....+...+.++.... . .+|-.- +++.|+..++.++++||
T Consensus       160 ~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PG  238 (586)
T PLN02271        160 VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLLLPG  238 (586)
T ss_pred             CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHhcCCC
Confidence            5677877776665543222      3444445557776666776666653321 1 344443 77889999999999999


Q ss_pred             CeEEeeCCCCCCcHHH---------HhhcCCEEE--EEeccCCCCcccChHHHHH-hhcCCccEEEEeCCCCccccCCCH
Q 014769          132 ANVLLPRPGWPYYEGI---------AQRKQVEVR--HFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       132 d~vlv~~p~~~~~~~~---------~~~~g~~~~--~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      |+|+..+..|.++...         +...|..+.  .|+++++ +..+|.+++++ +...++++|++..-.+|  ..+| 
T Consensus       239 D~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D-  314 (586)
T PLN02271        239 DRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRPKILICGGSSYP--REWD-  314 (586)
T ss_pred             CEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC-
Confidence            9999988877765322         133454433  4445433 45799999998 55667888777666777  5567 


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC--------
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG--------  271 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--------  271 (419)
                        ++++.++|+++|+++++|.+|......+...++.... .   .++++|++|+  +.|.|.|.+++++...        
T Consensus       315 --~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~-a---Dvvt~TTHKt--LrGPrGG~I~~r~~~~~~~~g~~g  386 (586)
T PLN02271        315 --YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY-C---DIVTSTTHKS--LRGPRGGIIFYRKGPKLRKQGMLL  386 (586)
T ss_pred             --HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC-C---cEEEeCCccc--CCCCCceEEEecccccccccCCcc
Confidence              8888999999999999999998765544322211111 2   3888999998  5777789998864210        


Q ss_pred             ----ccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769          272 ----IFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS  345 (419)
Q Consensus       272 ----~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  345 (419)
                          ....+++.+++....  .+-+++......+++.++.+.....+.+..+++.++.+.|.+.|.+. |+.++......
T Consensus       387 s~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdn  465 (586)
T PLN02271        387 SHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDN  465 (586)
T ss_pred             ccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCc
Confidence                000124555665543  22233333334555555654333445788889999999999999887 88755444556


Q ss_pred             EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----CCCeEEEEe------ecCHHHHHHHHHHHHHHHH
Q 014769          346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----LKNWLRIAF------CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~~Ris~------~~~~~~l~~~l~~l~~~~~  413 (419)
                      ..+++++....     -....+++.|++.||.+.--.-++     .++.+||+.      +..++++++..+.|.++++
T Consensus       466 HlvLvDl~~~g-----~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        466 HLLLWDLTTLG-----LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ  539 (586)
T ss_pred             ceeeecCcccC-----CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence            77788775432     123556777899999885433222     257899998      2357888888888888776

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.82  E-value=5.2e-17  Score=156.06  Aligned_cols=350  Identities=11%  Similarity=0.047  Sum_probs=208.0

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..+.....  -.-+|.+.+++.+++.....   ....-..+.+..+++.+.+..+  ...+.+++++++++
T Consensus        69 ~dG~~ylD~~g~~~~~l--Gh~~p~v~~Ai~~ql~~~~~---~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse  141 (459)
T PRK06082         69 VDGKKYMDFHGNNVHQL--GYGHPHVIEKVKEQMAKLPF---SPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTS  141 (459)
T ss_pred             CCCCEEEEcccHhhccc--CCCCHHHHHHHHHHHHhCCC---ccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHH
Confidence            35788999873322211  12689999999999875322   1111123445555555554332  22368999999999


Q ss_pred             HHHHHHHHhcC-C-CCeEEeeCCCCCCcHHHHhhc-CCE------------EEEEeccCCCC--cc-c------ChHHHH
Q 014769          119 AVEVILSVLAR-P-GANVLLPRPGWPYYEGIAQRK-QVE------------VRHFDLLPERN--WE-V------DLDAVE  174 (419)
Q Consensus       119 al~~~~~~l~~-~-gd~vlv~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~~~--~~-~------~~~~l~  174 (419)
                      |++.+++.... . ..+|+....+|++....+... +..            +..++......  +. .      .++.++
T Consensus       142 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  221 (459)
T PRK06082        142 AIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLE  221 (459)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHH
Confidence            99999987642 2 378888899998764333222 211            11111100000  00 0      124466


Q ss_pred             HhhcC-CccEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          175 ALADK-NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       175 ~~~~~-~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      +.+.. +..+.+|..| .+..+...|.++++++.++|++||+++|+||++.++...|..+ ....++..+.++   +++|
T Consensus       222 ~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f-a~e~~gv~PDiv---~~gK  297 (459)
T PRK06082        222 YVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF-THQAYGIEPDIL---CIGK  297 (459)
T ss_pred             HHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HhHhhCCCCCEE---Eecc
Confidence            66642 2345566666 4444557899999999999999999999999999875555432 112233333334   4789


Q ss_pred             cCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769          253 RWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       253 ~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      .++ .| +++|.+++++        ++...+... ...+++.++++..++.+.|+....+   ...++++++.+++.+.|
T Consensus       298 gl~-gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L  365 (459)
T PRK06082        298 GLG-GGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERL  365 (459)
T ss_pred             ccc-CCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence            965 46 5999998865        343332211 1235667888877777777653221   23445555555555555


Q ss_pred             hc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHH
Q 014769          331 KE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSAL  401 (419)
Q Consensus       331 ~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l  401 (419)
                      ++    +|.+..  ...-|.++.+.+.........+   ...+...+ .++||++.+..    .+.+|+++  ..++++|
T Consensus       366 ~~l~~~~~~i~~--vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~----~~~i~~~Ppl~it~~ei  438 (459)
T PRK06082        366 LEMKAKYPLIGD--VRGIGLLWGVELVTDRHTKERAYDEAEAVLYRC-LNNGLSFKVSQ----GNVIQLSPPLIITREEL  438 (459)
T ss_pred             HHHHhhCCCeee--eeeccceeEEEEccCccccCccHHHHHHHHHHH-HhCCCEEEecC----CCEEEEeCCCccCHHHH
Confidence            44    332221  2234666666664211000001   23444455 56899987732    47899997  4699999


Q ss_pred             HHHHHHHHHHHHHHhcc
Q 014769          402 KDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       402 ~~~l~~l~~~~~~~~~~  418 (419)
                      +++++++++++.+..++
T Consensus       439 d~~~~~l~~~l~~~~~~  455 (459)
T PRK06082        439 TQALAILEEAIAKICQD  455 (459)
T ss_pred             HHHHHHHHHHHHHHhhh
Confidence            99999999999887554

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.82  E-value=3.4e-19  Score=156.02  Aligned_cols=288  Identities=18%  Similarity=0.223  Sum_probs=183.4

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC------CCeEEeeCCCCCCcHHHHhhcCCEEEEEe
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP------GANVLLPRPGWPYYEGIAQRKQVEVRHFD  159 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~  159 (419)
                      .++|.+.|.+++....+...+...|++.+|+|+.+++++.+|...      .-.|+...|.|+.|.............+.
T Consensus        45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~  124 (363)
T PF04864_consen   45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA  124 (363)
T ss_dssp             -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred             cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence            478999999988776666667778999999999999999999532      25789999999999877766554433333


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      -+. ..|.       ..-...+-.=++++||||.|.+     .+.++   +..+..+|.|-+|..-.|+     ++....
T Consensus       125 Gda-~~~~-------~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyT-----pI~~~a  183 (363)
T PF04864_consen  125 GDA-SNFK-------NSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYT-----PITAPA  183 (363)
T ss_dssp             EEC-CCGT-------T-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-B
T ss_pred             ccH-Hhhc-------cCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccccc-----ccCCCC
Confidence            221 1121       1111123344899999999986     33344   3445668999999974443     332221


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccc----h-----
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTK----E-----  309 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~----~-----  309 (419)
                        +..|.+.|+||.-|-+|.|+||.+++++       ++.+++..+... +.+++--+|.-+.++|+...    .     
T Consensus       184 --D~DiMLFT~SK~TGHAGSR~GWAlVKD~-------~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~  254 (363)
T PF04864_consen  184 --DHDIMLFTLSKLTGHAGSRFGWALVKDE-------EVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTE  254 (363)
T ss_dssp             ----SEEEEEHHHHCS-GGG-EEEEEES-H-------HHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTT
T ss_pred             --CCceEEEEEecccCccccccceeeecCH-------HHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCcc
Confidence              2237788999998999999999999763       688888877543 56778888877777666421    1     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcC-----CCCC---C-----CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCe
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEI-----PCIS---C-----PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV  376 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~---~-----~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv  376 (419)
                      +.+.--.+.+++|.+.|.+.+..-     +.+.   |     +..| ..-|.|++++..      ++ .-+...|++.||
T Consensus       255 ~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~p-sPafAWlkCe~e------ed-~DC~~~l~~~~I  326 (363)
T PF04864_consen  255 DIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREP-SPAFAWLKCERE------ED-EDCYAVLREAKI  326 (363)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE----SEEEEEESSC------GG-SSHHHHHHCTTE
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCC-CCCeEEEecCCc------cc-ccHHHHHHhCCc
Confidence            355666788899999999988752     2111   0     1122 345899999742      11 224566688999


Q ss_pred             EeecCCCCCC-CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          377 IVTPGIYVGL-KNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       377 ~v~~g~~~~~-~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                      ....|..|+. ..++|||+-.++++++.++++|...
T Consensus       327 ~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l  362 (363)
T PF04864_consen  327 ITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL  362 (363)
T ss_dssp             EEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred             ccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence            9999999997 6899999999999999999999753

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PRK06105 aminotransferase; Provisional

Probab=99.82  E-value=3.3e-17  Score=157.68  Aligned_cols=355  Identities=14%  Similarity=0.083  Sum_probs=211.8

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +...+|+.+|||..|..+.. .-.-+|.+.+++.+++++..+ ..+.  ....+.+..+++.+.+..+  .+.+.+++++
T Consensus        42 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~  116 (460)
T PRK06105         42 VYDDAGKRYIEGMAGLWSVA-LGFSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTN  116 (460)
T ss_pred             EEECCCCEEEEcchhHHhcc-CCCCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeC
Confidence            33456899999988843322 123579999999999876431 1111  1123444555555554332  2346899999


Q ss_pred             cHHHHHHHHHHHhc------C-CC-CeEEeeCCCCCCcHHHHhhcCC-E------------EEEEeccCCCCc-------
Q 014769          115 GCKQAVEVILSVLA------R-PG-ANVLLPRPGWPYYEGIAQRKQV-E------------VRHFDLLPERNW-------  166 (419)
Q Consensus       115 g~~~al~~~~~~l~------~-~g-d~vlv~~p~~~~~~~~~~~~g~-~------------~~~~~~~~~~~~-------  166 (419)
                      ++++|++.+++...      . ++ .+|+....+|++....+..... .            +..++......+       
T Consensus       117 SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  196 (460)
T PRK06105        117 SGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESE  196 (460)
T ss_pred             CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCCh
Confidence            99999999999853      1 22 5788889999876433221111 0            111111100000       


Q ss_pred             ----ccChHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769          167 ----EVDLDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       167 ----~~~~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                          ....+++++.+.   .+..+.+|+.| +...|. ..|.++++++.++|++||+++|+||++.++...|..+ ....
T Consensus       197 ~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~  275 (460)
T PRK06105        197 EAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCET  275 (460)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHh
Confidence                001345566553   23456667777 555566 4699999999999999999999999998875555432 2223


Q ss_pred             cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccch
Q 014769          238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~  309 (419)
                      ++..+.++   +++|.++...+++|.+++++        ++.+.+...        ...+++.++++..++.+.|+...+
T Consensus       276 ~~v~PDi~---~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~  344 (460)
T PRK06105        276 FGIKPDIL---VMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE  344 (460)
T ss_pred             cCCCCCee---eeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence            33333333   67899654336899999875        566666531        123566788888887777765332


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCcccc--cCCCC----HHHHHHHHHHhcCeEeecCC
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWLL--EDIND----DIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v~~g~  382 (419)
                      +   +..+++++..+++.+.|+++....++ ....-|++.-+.+.....  .....    ...+...+ .++||++.+. 
T Consensus       345 ~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~-~~~Gvl~~~~-  419 (460)
T PRK06105        345 R---DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAA-HEHGVISRAM-  419 (460)
T ss_pred             c---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHH-HHCCeEEEec-
Confidence            2   23344555555555555443111111 122346666666632110  00001    13444444 5689999774 


Q ss_pred             CCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          383 YVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       383 ~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                          .+.+|+++.  .++++++++++++.++++++.
T Consensus       420 ----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~  451 (460)
T PRK06105        420 ----GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA  451 (460)
T ss_pred             ----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence                258999974  599999999999999998764

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.82  E-value=7.3e-17  Score=149.97  Aligned_cols=321  Identities=16%  Similarity=0.156  Sum_probs=209.6

Q ss_pred             HHHHHH-HHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCC
Q 014769           62 VEAEDA-IVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG  140 (419)
Q Consensus        62 ~~v~~a-~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~  140 (419)
                      .++.++ +...+. ++- .|..+..+.+|++++++++        +-+.++.|++++.|++.++...++|||.|  +.++
T Consensus        50 ~aMs~~q~a~~~~-GDe-~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~  117 (450)
T TIGR02618        50 NAMSDKQWAGLMM-GDE-AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM  117 (450)
T ss_pred             HHHHHHHHHHhhh-cch-hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence            555555 444443 222 5888888899999999998        34689999999999998887788999977  6677


Q ss_pred             CCCcHH-HHhhcCCEEEEEecc--------CCCCcccChHHHHHhhcCC----ccEEEEeCCCC-ccccCCCHHHHHHHH
Q 014769          141 WPYYEG-IAQRKQVEVRHFDLL--------PERNWEVDLDAVEALADKN----TAAMVIINPGN-PCGNVFTYHHLQEIA  206 (419)
Q Consensus       141 ~~~~~~-~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~----~~~v~i~~p~n-ptG~~~~~~~l~~i~  206 (419)
                      |..... .....|..+.-++.+        ....+.+|++.+++++++.    .+.+.+.+++| ..|+++|.++++++.
T Consensus       118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~  197 (450)
T TIGR02618       118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR  197 (450)
T ss_pred             eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence            754333 357777754444322        1234678999999999752    34677778877 558999999999999


Q ss_pred             HHHHhCCCeEEEccccccc--c--------cCCCCCC----CccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCC
Q 014769          207 EMARKLRVMVVADEVYGHL--T--------FGSIPYT----PMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNG  271 (419)
Q Consensus       207 ~~~~~~~~~li~De~~~~~--~--------~~~~~~~----~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~  271 (419)
                      ++|+++|+.+|.|.+....  .        +.+.+..    .+..+.+    .++.|..|.++.+ |   |+++++++  
T Consensus       198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD----~~~~S~~Kd~~~~~G---G~l~~~d~--  268 (450)
T TIGR02618       198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD----GCTMSGKKDCLVNIG---GFLCMNDD--  268 (450)
T ss_pred             HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc----EEEEeeccCCCCCCc---eEEEeCCH--
Confidence            9999999999999998761  1        1111110    0111221    4666888886665 4   66665542  


Q ss_pred             ccchhhHHHHHHhhhcc------ccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          272 IFQKSGIIDSIKDCLSI------YSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~~~------~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                           +++++.+...-.      .+..+.-...+++..|++.. ..+.+    +-..+.++|.+.|.+. |+.+ ..|.+
T Consensus       269 -----~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~----~r~~~a~~La~~L~~~-Gvpv-~~p~g  337 (450)
T TIGR02618       269 -----EMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIE----HRVKQVRYLGDKLKAA-GVPI-VEPVG  337 (450)
T ss_pred             -----HHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHH----HHHHHHHHHHHHHHHC-CCcc-cCCCC
Confidence                 577777665311      11223223344444454422 22222    2333566777788777 8874 47888


Q ss_pred             eEEEEeecCccc---ccCCCCHHHHHHHHHHhcCeEee-cCCCC-CC-----------CCeEEEEee---cCHHHHHHHH
Q 014769          345 SMVTMVKLNPWL---LEDINDDIEFALKLAKEESVIVT-PGIYV-GL-----------KNWLRIAFC---AEPSALKDGL  405 (419)
Q Consensus       345 g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~v~-~g~~~-~~-----------~~~~Ris~~---~~~~~l~~~l  405 (419)
                      |..++++.....   .+..-....++.+|..+.||.-. -|+.. +.           -..+|+++-   .+.+.++...
T Consensus       338 gh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~  417 (450)
T TIGR02618       338 GHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVA  417 (450)
T ss_pred             cceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHH
Confidence            888888653310   01112467888899899999643 33321 11           146999993   4889999999


Q ss_pred             HHHHHHHHH
Q 014769          406 GRMKAFCQR  414 (419)
Q Consensus       406 ~~l~~~~~~  414 (419)
                      +.|..+.++
T Consensus       418 ~~~~~~~~~  426 (450)
T TIGR02618       418 DGIIKLYKH  426 (450)
T ss_pred             HHHHHHHhh
Confidence            999887754

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.82  E-value=5.1e-17  Score=156.18  Aligned_cols=357  Identities=13%  Similarity=0.033  Sum_probs=215.4

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC---CCCCcEEE
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK---LSADDVYV  112 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~---~~~~~i~~  112 (419)
                      +...+|+.+|||..|.-... .-..+|.+.+++.+++..-..  .....-..+.+..+++.+.+..+..   -+.+.+++
T Consensus        58 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f  134 (472)
T PRK08742         58 LVGHDGRRYLDAVSSWWTNL-FGHAEPRIGAAIAAQAGELEQ--VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFY  134 (472)
T ss_pred             EEeCCCCEEEEcCccHHhcc-CCCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEE
Confidence            44456899999988843321 123578999999998864221  1110111244556666655433211   12368999


Q ss_pred             cccHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCC--Cccc-
Q 014769          113 TLGCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPER--NWEV-  168 (419)
Q Consensus       113 t~g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~-  168 (419)
                      ++++++|++.+++....       ++ .+|+....+|++....+...+..             +..++.....  .++. 
T Consensus       135 ~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~  214 (472)
T PRK08742        135 ADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQS  214 (472)
T ss_pred             eCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCC
Confidence            99999999999987642       22 68999999999865443332211             1111111000  0011 


Q ss_pred             -------ChHHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769          169 -------DLDAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG  236 (419)
Q Consensus       169 -------~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  236 (419)
                             +++.+++.+..  +..+.+|+.|  ++-.|. ..|.++++++.++|+++|+++|.||++.++...|..+ ...
T Consensus       215 ~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~-a~e  293 (472)
T PRK08742        215 AEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLF-ACE  293 (472)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-HHH
Confidence                   24555666532  3455677777  455676 5789999999999999999999999999887666432 222


Q ss_pred             ccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccc
Q 014769          237 LFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       237 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~  308 (419)
                      .++..+.++   +++|.+ ..| +++|.+++++        ++.+.+...       ...+++.++++..++.+.|+...
T Consensus       294 ~~gv~PDiv---~~gKgl-~gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~  361 (472)
T PRK08742        294 QAGVMPDLL---CLSKGL-TGGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFA  361 (472)
T ss_pred             hcCCCCCEE---EEcccc-cCCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHH
Confidence            333333444   468995 557 4899999865        566655421       12356678888888888877644


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc--CCCCH----HHHHHHHHHhcCeEeecCC
Q 014769          309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE--DINDD----IEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~--~~~~~----~~~~~~ll~~~gv~v~~g~  382 (419)
                      ++.+.++..++.++...+.+.++++|.+..  ...-|+++-+.+......  .....    ..+...+ .++||++.+. 
T Consensus       362 ~~~l~~~~~~~g~~l~~~~~~~~~~~~i~d--vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~-  437 (472)
T PRK08742        362 DDDVIARNQPTAARMTQLAAQIGEHPHVAD--VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAA-LARGVVLRPL-  437 (472)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHhcCCCeee--EeccceEEEEEeccCccccccCCchhHHHHHHHHHH-HHCCeEEEec-
Confidence            333433333333333344444444543321  234466666666421100  00011    2344444 5689999774 


Q ss_pred             CCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          383 YVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       383 ~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                          .+.+||.+  ..++++|++++++|++++.+..
T Consensus       438 ----g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~  469 (472)
T PRK08742        438 ----GDVLYWMPPYCVDEAQLALLADTTRHAIDEAV  469 (472)
T ss_pred             ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence                25899998  4689999999999999998753

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.81  E-value=2.8e-17  Score=156.60  Aligned_cols=348  Identities=12%  Similarity=0.073  Sum_probs=211.0

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.++||..|.-... .-.-+|.+.+++.+++.+.......  .-..+.+..+++.+....  +...+.++++++
T Consensus        38 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~s  112 (429)
T PRK06173         38 ITLKDGRRLIDGMSSWWAAL-HGYNHPRLNAAATNQLAKMSHIMFG--GFTHEPAVELAQKLLEIL--PPSLNKIFFADS  112 (429)
T ss_pred             EEcCCCCEEEEccchHHhcc-CCCCCHHHHHHHHHHHHhcCCcccc--ccCCHHHHHHHHHHHhhC--CCCcCEEEEeCC
Confidence            33456999999988732211 1235799999999998763221110  011233344444444322  223468999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCCc-----cc
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERNW-----EV  168 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~  168 (419)
                      +++|++.+++....       ++ .+|+....+|++....+... +.             .+..++.+. ..+     .-
T Consensus       113 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~  191 (429)
T PRK06173        113 GSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPS-IKFGEEWNDE  191 (429)
T ss_pred             chHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCC-cccchhHHHH
Confidence            99999999887642       23 57899999998853222211 10             011121110 000     01


Q ss_pred             ChHHHHHhhcC--CccEEEEeCC--CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769          169 DLDAVEALADK--NTAAMVIINP--GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP  243 (419)
Q Consensus       169 ~~~~l~~~~~~--~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  243 (419)
                      +++.+++.+..  +..+.+|..|  +.-.|.. .|.++++++.++|++||+++|+||++.++...|..+ ....++..+.
T Consensus       192 ~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PD  270 (429)
T PRK06173        192 AIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLF-ALEHAGVVPD  270 (429)
T ss_pred             HHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcch-HHHhcCCCCC
Confidence            35556666642  3455667777  5666764 799999999999999999999999998765455432 1122222222


Q ss_pred             EEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-----h-hccccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          244 VITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-----C-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                       |+  +++|.+ ..| +.++.+++++        ++.+.+..     + ...++..++++..++.+.|+...++   ...
T Consensus       271 -iv--~~gK~l-~gG~~p~~a~~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~  335 (429)
T PRK06173        271 -IM--CIGKAL-TGGYLTLSATITTE--------AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQ  335 (429)
T ss_pred             -EE--Eeehhh-hCCccccceEEecH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHH
Confidence             33  489996 457 4788888765        56676642     1 1223456777777777777653221   234


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-
Q 014769          317 DTLRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-  394 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-  394 (419)
                      ++++++.+++.+.|+++.++..+. ....|++.-+.+...     .+...+...+ .++||.+.+..     +.+|+.+ 
T Consensus       336 ~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~-----~~~~~i~~~l-~e~Gi~v~~~g-----~~l~~~Pp  404 (429)
T PRK06173        336 QNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP-----VNMATLQPRF-VEHGIWVRPFG-----KLVYIMPP  404 (429)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc-----ccHHHHHHHH-HHCCeEEEecC-----CEEEEeCC
Confidence            556666666777666432222121 123466666666431     1234555555 66799997742     5899998 


Q ss_pred             -ecCHHHHHHHHHHHHHHHHHHh
Q 014769          395 -CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       395 -~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                       ..+++++++++++|++++.+..
T Consensus       405 l~it~~ei~~~~~~l~~~l~~~~  427 (429)
T PRK06173        405 FIISPDELSQLTSGLLRVLKQEY  427 (429)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHh
Confidence             4689999999999999998754

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.81  E-value=3e-17  Score=156.19  Aligned_cols=344  Identities=14%  Similarity=0.089  Sum_probs=208.3

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.++||..|..... .-.-+|.+.+++.++++......+..  -..+....+++.+.+..+  ...+.++++++
T Consensus        34 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~S  108 (422)
T PRK05630         34 LTLEDGSTVIDAMSSWWSAA-HGHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDS  108 (422)
T ss_pred             EEECCCCEEEEcchhHHHhc-CCCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCC
Confidence            44456999999988843321 12357899999999987643221110  012334444555443222  22468999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCCccc-C---
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERNWEV-D---  169 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-~---  169 (419)
                      +++|++.+++....       ++ .+|+....+|++....+... +.             ....++......... +   
T Consensus       109 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  188 (422)
T PRK05630        109 GSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISE  188 (422)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHH
Confidence            99999999887542       23 57999999999854333222 10             111222111100000 1   


Q ss_pred             -hHHHHHhhcCCccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          170 -LDAVEALADKNTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       170 -~~~l~~~~~~~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                       .+.+++.+.+ ..+.+|..|  +.-.|. ..+.+.++++.++|++||+++|+||++.++...|..+ ....++..+.++
T Consensus       189 ~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDi~  266 (422)
T PRK05630        189 YLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPDIM  266 (422)
T ss_pred             HHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh-HHHhcCCCCCee
Confidence             2334444443 445556666  566676 4678999999999999999999999998875555322 122223222333


Q ss_pred             EEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       246 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                         +++|.+ ..| +.+|++++++        ++.+.+...       ...+++.++++..++.++|+...++.   ..+
T Consensus       267 ---t~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~---~~~  331 (422)
T PRK05630        267 ---CVGKAL-TGGFMSFAATLCTD--------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGM---WRK  331 (422)
T ss_pred             ---eeechh-hcCccccceeeccH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCc---HHH
Confidence               678984 346 5899999876        566666421       12356678888887777776533222   233


Q ss_pred             HHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe
Q 014769          318 TLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF  394 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~  394 (419)
                      +++++.+++.+.|+.   .|.+..  ...-|++.-+.+...     .+...+...+ .++||++.+.     .+.+|+.+
T Consensus       332 ~~~~~g~~l~~~L~~l~~~~~v~~--vRg~Gl~~~ie~~~~-----~~~~~~~~~~-~~~Gl~~~~~-----g~~l~~~P  398 (422)
T PRK05630        332 QVKRIEAELIAGLSPLAHLPGVAD--VRVLGAIGVVEMEQP-----VDMEEATQAA-VDHGVWLRPF-----GRLVYVMP  398 (422)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeee--eeccccEEEEEECCc-----ccHHHHHHHH-HHCCeEEEec-----CCEEEEEC
Confidence            455555555555543   232221  123366777777431     1234555555 6679999764     25889988


Q ss_pred             --ecCHHHHHHHHHHHHHHHHH
Q 014769          395 --CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       395 --~~~~~~l~~~l~~l~~~~~~  414 (419)
                        ..+++++++++++|+++++.
T Consensus       399 pL~it~~~i~~~~~~l~~al~~  420 (422)
T PRK05630        399 PYITTSEQIAQICAALAAAVKA  420 (422)
T ss_pred             CccCCHHHHHHHHHHHHHHHhc
Confidence              46899999999999999865

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.81  E-value=5.4e-17  Score=155.50  Aligned_cols=353  Identities=16%  Similarity=0.118  Sum_probs=210.0

Q ss_pred             hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ...+|+.+|||..|.-+.. .-.-+|.+.+++.+++.....  ++...-..+....+++.+.+..+  ...+.|++++++
T Consensus        44 ~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sG  118 (445)
T PRK09221         44 TDADGRKILDGTAGLWCCN-AGHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSG  118 (445)
T ss_pred             EeCCCCEEEEccccHhhcc-CCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCc
Confidence            3446899999988843321 123678999999999876321  11111112344445555544322  124689999999


Q ss_pred             HHHHHHHHHHhcC-------C-CCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccC-C--CCccc----
Q 014769          117 KQAVEVILSVLAR-------P-GANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLP-E--RNWEV----  168 (419)
Q Consensus       117 ~~al~~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~-~--~~~~~----  168 (419)
                      ++|++.+++....       + ..+|+....+|++....+.....             .+..++... .  ..+..    
T Consensus       119 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (445)
T PRK09221        119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPE  198 (445)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHH
Confidence            9999999887542       1 25799999999876433221110             111222110 0  00000    


Q ss_pred             ----ChHHHHHhhcC---CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          169 ----DLDAVEALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       169 ----~~~~l~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                          ..+.+++.+..   +..+.+++.| ....|. ..+.++++++.++|+++|+++|+||++.++...|..+ ....++
T Consensus       199 ~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~g  277 (445)
T PRK09221        199 HGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFG  277 (445)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcC
Confidence                13456665542   3345566666 555676 4688999999999999999999999998765545432 122222


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccchHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKEDF  311 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~  311 (419)
                      ..+.++   +++|.++...+++|.+++++        ++++.+...        ...+++.++++..++.+.|+...++ 
T Consensus       278 v~PDi~---~~gK~l~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~-  345 (445)
T PRK09221        278 VTPDII---TFAKGLTNGAIPMGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE-  345 (445)
T ss_pred             CCCCEE---EeccccccCcccceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc-
Confidence            222233   67899643337899988865        566655421        1235566777777777777653222 


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeE
Q 014769          312 FCKLIDTLRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWL  390 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~  390 (419)
                        ...++++++.+++++.|+++.....+. ...-|.+..+.+............++...+ .++||.+.++     .+.+
T Consensus       346 --~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~l  417 (445)
T PRK09221        346 --DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKC-FEKGLLVRYT-----GDTI  417 (445)
T ss_pred             --cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHH-HHCCeEEeec-----CCEE
Confidence              335566777777777776542221111 122355555555321100001124555555 5679998764     3579


Q ss_pred             EEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          391 RIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       391 Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      |+++  ..++++|++++++|++++.++
T Consensus       418 r~~Ppl~~t~~eid~~~~~l~~~l~~~  444 (445)
T PRK09221        418 ALSPPLIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             EEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            9997  468999999999999999764

>PRK06062 hypothetical protein; Provisional

Probab=99.81  E-value=6.9e-17  Score=155.05  Aligned_cols=351  Identities=15%  Similarity=0.124  Sum_probs=208.4

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|.-... .-.-+|.+.+++.+++.....  +.. .-..+.+..+++.+.+..+  -+.+.|+++++
T Consensus        47 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~S  120 (451)
T PRK06062         47 VWDYEGRRYLDFSSQLVNTN-IGHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNG  120 (451)
T ss_pred             EEECCCCEEEEcccCHHhhc-CCCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCC
Confidence            33456899999988843221 123578999999999876432  111 1123444555555544322  22468999999


Q ss_pred             HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC-E-----------EEEEeccCCC--Ccc--cC-------h
Q 014769          116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV-E-----------VRHFDLLPER--NWE--VD-------L  170 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~-~-----------~~~~~~~~~~--~~~--~~-------~  170 (419)
                      +++|.+.+++.... .| .+|+....+|++....+..... .           +..++.....  .+.  -+       +
T Consensus       121 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  200 (451)
T PRK06062        121 GADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL  200 (451)
T ss_pred             hHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence            99999999987643 23 6788899999987544432211 0           1111111000  010  01       4


Q ss_pred             HHHHHhhcC---CccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          171 DAVEALADK---NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       171 ~~l~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      +.+++.+..   +..+.+|+.| ....|.+ .|.++++++.++|+++|+++|+||++.+|...|..+ ....++..+.++
T Consensus       201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PDi~  279 (451)
T PRK06062        201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPDLI  279 (451)
T ss_pred             HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCCee
Confidence            566666642   3345666677 4445665 689999999999999999999999999875544321 112222222333


Q ss_pred             EEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       246 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                         +++|.+ ..| +++|.+++++        ++++.+...   ...+++.++++..++.+.|+....+.+.   ++.++
T Consensus       280 ---t~gK~l-ggG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~---~~~~~  344 (451)
T PRK06062        280 ---TFAKGV-NSGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIV---ENAAR  344 (451)
T ss_pred             ---eechhh-hcCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHH
Confidence               678995 456 4899999875        567766532   2235667888888888887753322222   23333


Q ss_pred             HH-HHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccc--cCCC-------CHHHHHHHHHHhcCeEeecCCCCCCC
Q 014769          322 SA-EICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLL--EDIN-------DDIEFALKLAKEESVIVTPGIYVGLK  387 (419)
Q Consensus       322 ~~-~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~-------~~~~~~~~ll~~~gv~v~~g~~~~~~  387 (419)
                      .. +++.+.|+    +.+.+..  ...-|+++-+.+.....  ....       ....+...+ .++||++.+.     .
T Consensus       345 ~G~~~l~~~L~~l~~~~~~v~~--vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~-----~  416 (451)
T PRK06062        345 IGAEVLGPGLRELAERHPSVGE--VRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAAC-KERGLLPFVN-----G  416 (451)
T ss_pred             HHHHHHHHHHHHHHhcCCcEEe--EeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHH-HHCCcEEeec-----C
Confidence            32 23333333    3332221  22335555565532100  0000       023455555 5679998652     3


Q ss_pred             CeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          388 NWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       388 ~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +.+|+++  ..++++|++++++++++++++.
T Consensus       417 ~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~  447 (451)
T PRK06062        417 NRIHVVPPCTVTEDEVREGLAILDAALAVAD  447 (451)
T ss_pred             CEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence            5789988  5799999999999999998653

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.80  E-value=7.4e-17  Score=153.53  Aligned_cols=349  Identities=11%  Similarity=0.013  Sum_probs=204.5

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|.-+.. .-..+|.+.+++.+++.......+.     .+.+..+++.+.+..+  ...+.++++++
T Consensus        47 l~D~dG~~yiD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~S  118 (433)
T PRK00615         47 FIDSLGKTFIDFCGSWGSLI-HGHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYLG--LEDHKIRFVSS  118 (433)
T ss_pred             EEECCCCEEEEcccchhccc-cCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCc
Confidence            33456899999988854321 1236899999999998765422222     2334444554443222  22368999999


Q ss_pred             HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHH---HhhcCCEE-----EEEeccCCCCc-----ccChHHHHHhhcC-
Q 014769          116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGI---AQRKQVEV-----RHFDLLPERNW-----EVDLDAVEALADK-  179 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~---~~~~g~~~-----~~~~~~~~~~~-----~~~~~~l~~~~~~-  179 (419)
                      +++|++.+++.... .| .+|+....+|+++...   ....+...     ......+....     --|.+.+++.+.. 
T Consensus       119 GsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~  198 (433)
T PRK00615        119 GTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL  198 (433)
T ss_pred             hHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc
Confidence            99999999987643 34 6788889999886421   11111000     00000000000     0156777777642 


Q ss_pred             -CccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC
Q 014769          180 -NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV  256 (419)
Q Consensus       180 -~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  256 (419)
                       +..+.+|+.| ....|.. .+.+++++|.++|++||+++|+||++.++ ..|... ....++..+.++   +++|.+ .
T Consensus       199 ~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~g-a~~~~gv~PDi~---~~gK~l-g  272 (433)
T PRK00615        199 GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGG-AAAIYHVKPDIT---VYGKIL-G  272 (433)
T ss_pred             CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhH-HHHhcCCCCCeE---EEcccc-c
Confidence             2345566666 4445664 56899999999999999999999999876 333211 112222222233   479995 4


Q ss_pred             CCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh--
Q 014769          257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV--  330 (419)
Q Consensus       257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l--  330 (419)
                      .|+++|++++++        ++++.+...    ...+++.+++...++.+.|+...++   ...++++++.+++.+.|  
T Consensus       273 gG~p~~av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~  341 (433)
T PRK00615        273 GGLPAAAVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEE  341 (433)
T ss_pred             CCcceeeeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHH
Confidence            578899999976        577776432    1224456777777777777653321   12334444444443333  


Q ss_pred             --hcCCCCCCCCCCCceEEEEeecCcccccCC-----CC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHH
Q 014769          331 --KEIPCISCPNKPEGSMVTMVKLNPWLLEDI-----ND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSA  400 (419)
Q Consensus       331 --~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~-----~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~  400 (419)
                        .+. ++. +.....|.++.+.+........     .+   ...+...+ .++||++.|....   .+ =++...++++
T Consensus       342 ~~~~~-g~~-v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~---~~-~ls~~ht~~d  414 (433)
T PRK00615        342 MIRSQ-GFP-VSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSA-FSKGVYLSPSPFE---AS-FLSSAHSMEN  414 (433)
T ss_pred             HHHHc-CCC-eEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHH-HHCCeeecCcccc---cc-ceecCCCHHH
Confidence              332 332 1111245565666643211000     01   12455555 5679999875421   11 3566789999


Q ss_pred             HHHHHHHHHHHHHHHh
Q 014769          401 LKDGLGRMKAFCQRHT  416 (419)
Q Consensus       401 l~~~l~~l~~~~~~~~  416 (419)
                      |+++++.+.+++.+..
T Consensus       415 id~~~~a~~~~~~~~~  430 (433)
T PRK00615        415 LDYAQNVLIDSLEKVF  430 (433)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998764

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.80  E-value=1.2e-16  Score=153.65  Aligned_cols=351  Identities=11%  Similarity=0.025  Sum_probs=212.8

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.++||..|.-... .-.-+|.+.+++.+++.......  ...-..+.+..+++.+.+..  +...+.++++++
T Consensus        41 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~l~~~~--~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~s  115 (466)
T PRK07030         41 LEDFEGKRYLDAVSSWWVNV-FGHANPRINQRIKDQVDQLEHVI--LAGFSHEPVIELSERLVKIT--PPGLSRCFYADN  115 (466)
T ss_pred             EEECCCCEEEEcchhHHhhc-CCCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhC--CCCcCEEEEeCC
Confidence            44456999999988843321 12357899999999987632111  00111244455555554422  223468999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCC--Cccc----
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPER--NWEV----  168 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~----  168 (419)
                      +++|++.+++....       ++ .+|+....+|++....+...+..             +..++.....  .++.    
T Consensus       116 GsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~  195 (466)
T PRK07030        116 GSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEE  195 (466)
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHH
Confidence            99999999987632       23 57899999998865433322111             1111111000  0000    


Q ss_pred             ----ChHHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          169 ----DLDAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       169 ----~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                          +++.+++.+..  +..+.+|..|  +...|. ..|.++++++.++|+++|+++|.||++.++...|..+ ....++
T Consensus       196 ~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~-a~~~~g  274 (466)
T PRK07030        196 HSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAG  274 (466)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch-HHHhcC
Confidence                24455666642  3445566776  454565 5788999999999999999999999999886555422 122333


Q ss_pred             CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh--------hhccccCCchHHHHHHHHHHcccchH
Q 014769          240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD--------CLSIYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      ..+.++   +++|.+ ..| +++|.+++++        ++.+.+..        ....+++.++++..++.+.|+...++
T Consensus       275 v~PDiv---~~gKgl-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~  342 (466)
T PRK07030        275 IRPDFL---CLSKAL-TGGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQD  342 (466)
T ss_pred             CCCCEE---eeehhc-cCCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence            333344   468995 468 5999999875        56666642        12235667888888888887764322


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCccccc--CC-CC---HHHHHHHHHHhcCeEeecC
Q 014769          311 FFCKLIDTLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLLE--DI-ND---DIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~~--~~-~~---~~~~~~~ll~~~gv~v~~g  381 (419)
                      .   ..++.++..+++.+.|++   .|.+.  ....-|+++.+.+......  .. .+   ...+...+ .++||++.+.
T Consensus       343 ~---l~~~~~~~G~~l~~~L~~l~~~~~v~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~  416 (466)
T PRK07030        343 N---VIENNRALARRMAEATAHLADHPHVA--EVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHA-LERGALLRPL  416 (466)
T ss_pred             C---HHHHHHHHHHHHHHHHHHHhcCCCEE--EeEeceeEEEEEeccCccccccCcchhHHHHHHHHHH-HHCCeEEEec
Confidence            2   234444555555555544   33222  1234466666666321100  00 01   12444445 5689999763


Q ss_pred             CCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          382 IYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       382 ~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                           .+.+|+.+  ..++++|+++++++.+++++.
T Consensus       417 -----g~~i~~~Ppl~it~~eid~~~~~l~~al~~~  447 (466)
T PRK07030        417 -----GSVVYFLPPYVITPEQIDFLAEVASEGIDIA  447 (466)
T ss_pred             -----CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence                 25788886  579999999999999999876

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.80  E-value=5e-18  Score=142.18  Aligned_cols=166  Identities=17%  Similarity=0.104  Sum_probs=130.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH-HHHhhcCCEEEEEeccCCCC
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE-GIAQRKQVEVRHFDLLPERN  165 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~  165 (419)
                      .++++.+++++      +.+.+++++++|+++++..+++++..++++|+++.++|++.. ..+...|.++..++.+....
T Consensus         3 ~~~~~~l~~~~------~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~   76 (170)
T cd01494           3 EELEEKLARLL------QPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGY   76 (170)
T ss_pred             HHHHHHHHHHc------CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCc
Confidence            57889999988      356789999999999999999999988999999999999888 78888899999888755433


Q ss_pred             cccChHHHHHhh-cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769          166 WEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV  244 (419)
Q Consensus       166 ~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  244 (419)
                      ...+.+.+++.. .++++.+++++|+||+|...+   .++|.++|+++|+++|+|++|..+...... ..   ....+..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~~~~~d  149 (170)
T cd01494          77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG-VL---IPEGGAD  149 (170)
T ss_pred             cchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc-cc---cccccCC
Confidence            333333454433 456788899999999999998   588999999999999999999987654322 01   1112244


Q ss_pred             EEEecCCCcCCCCCceeEEEEee
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      +++.|++|.++.  .++|+++++
T Consensus       150 ~~~~s~~K~~~~--~~~G~l~~~  170 (170)
T cd01494         150 VVTFSLHKNLGG--EGGGVVIVK  170 (170)
T ss_pred             EEEEEcccccCC--CceEEEEeC
Confidence            888899999655  679999863

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PRK06148 hypothetical protein; Provisional

Probab=99.79  E-value=1.7e-16  Score=165.61  Aligned_cols=348  Identities=14%  Similarity=0.047  Sum_probs=210.4

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+|+.++||..|....   -..+|.+.+++.+++..... ..|.     .+.+..+++.+....+  ...+.++++++|+
T Consensus       621 ~dG~~ylD~~~g~~~l---GH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGs  690 (1013)
T PRK06148        621 NRGRAYLDCFNNVCHV---GHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGS  690 (1013)
T ss_pred             CCCCEEEEcccChhhc---CCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence            3588899998875221   23689999999999876422 1232     2344445555544222  2236899999999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccC--CCCccc-C-------hHH
Q 014769          118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLP--ERNWEV-D-------LDA  172 (419)
Q Consensus       118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~~~~~~-~-------~~~  172 (419)
                      +|++.+++.... .| .+|+....+|++....+.....             .+..++...  ...+.. +       .+.
T Consensus       691 EA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  770 (1013)
T PRK06148        691 EANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAES  770 (1013)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHH
Confidence            999999988653 23 6789999999876433222110             011111100  000110 1       123


Q ss_pred             HHHhhc-----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          173 VEALAD-----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       173 l~~~~~-----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      ++..+.     .+..+.+|+.| ..-.|. ..|+++++++.++|+++|+++|.||++.++...|........++..+.++
T Consensus       771 l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv  850 (1013)
T PRK06148        771 VAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV  850 (1013)
T ss_pred             HHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee
Confidence            444332     13355667777 333444 67999999999999999999999999998865554322333333333333


Q ss_pred             EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769          246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA  323 (419)
Q Consensus       246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  323 (419)
                         +++|.+ ..|+++|.+++++        ++++.+...  ...+++.++++..++.+.|+...++.   ..++.++..
T Consensus       851 ---t~gK~l-ggG~Plgav~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~---l~~~~~~~G  915 (1013)
T PRK06148        851 ---TMGKPI-GNGHPMGAVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDED---LQRNALEIG  915 (1013)
T ss_pred             ---eecccc-cCCcceEEEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHH
Confidence               578995 5689999999975        576666432  22356778888888888877543222   233444444


Q ss_pred             HHHHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769          324 EICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--  394 (419)
Q Consensus       324 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--  394 (419)
                      +++.+.|++    .|.+.  ..-.-|+++-+.+.........+   ...+...+ .++||++.+...+  .+.+||.+  
T Consensus       916 ~~l~~~L~~l~~~~~~i~--~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~g~~--~~vlr~~Ppl  990 (1013)
T PRK06148        916 NYLLAGLRELQDRFDIIG--DVRGMGLFLGIELVTDRKTKAPATAIARYVKNGA-RERGILIGTEGPH--DNVLKIRPPL  990 (1013)
T ss_pred             HHHHHHHHHHHHhCCCce--EEeeeceEEEEEecCCccccCccHHHHHHHHHHH-HhCCeEEeccCCC--CCEEEEeCCc
Confidence            555555443    33222  12244666666664211000011   22345455 5689999774322  47788887  


Q ss_pred             ecCHHHHHHHHHHHHHHHHHHh
Q 014769          395 CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       395 ~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ..++++++++++.|++++.+..
T Consensus       991 ~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148        991 IFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHh
Confidence            5799999999999999998753

>PRK07483 hypothetical protein; Provisional

Probab=99.79  E-value=1.9e-16  Score=151.67  Aligned_cols=355  Identities=16%  Similarity=0.099  Sum_probs=210.0

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|.-... .-.-+|.+.+++.++++...+....  ....+....+++.+....+  ...+.++++++++
T Consensus        26 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~av~~ql~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs  100 (443)
T PRK07483         26 DATGKRYLDASGGAAVSC-LGHSHPRVIAAIHAQIDRLAYAHTS--FFTTEPAEALADRLVAAAP--AGLEHVYFVSGGS  100 (443)
T ss_pred             eCCCCEEEEcCccHhhhc-cCCCCHHHHHHHHHHHHhccCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcH
Confidence            446899999998843321 1235789999999998764311111  0112444555555544222  2346899999999


Q ss_pred             HHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCc---cc-----
Q 014769          118 QAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNW---EV-----  168 (419)
Q Consensus       118 ~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~~-----  168 (419)
                      +|++.+++....       ++ .+|+....+|++....+.....             .+..++.....+.   ..     
T Consensus       101 EAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (443)
T PRK07483        101 EAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAY  180 (443)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHH
Confidence            999999887542       33 5689989999886433322211             0111111100000   00     


Q ss_pred             ---ChHHHHHhhc---CCccEEEEeCC-CC-ccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          169 ---DLDAVEALAD---KNTAAMVIINP-GN-PCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       169 ---~~~~l~~~~~---~~~~~v~i~~p-~n-ptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                         .++.+++.+.   .+..+.+++.| +. -.| ...+.++++++.++|++||+++|.||++.++...|..+ ....++
T Consensus       181 ~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~g  259 (443)
T PRK07483        181 GQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDG  259 (443)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcC
Confidence               0245555443   23445566677 32 235 46789999999999999999999999999876555322 222233


Q ss_pred             CCCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHHH
Q 014769          240 SIVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      ..+.++   +++|.+ ..|+ ++|.+++++        ++.+.+...     ...+++.++++..++.+.|+...++.  
T Consensus       260 v~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~--  325 (443)
T PRK07483        260 VAPDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDG--  325 (443)
T ss_pred             CCCCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcC--
Confidence            333344   568994 5685 999999976        566666431     12356678888888888876533222  


Q ss_pred             HHHHHHHHHHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccc--cCCC----CHHHHHHHHHHhcCeEeecCCC
Q 014769          314 KLIDTLRESAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLL--EDIN----DDIEFALKLAKEESVIVTPGIY  383 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~----~~~~~~~~ll~~~gv~v~~g~~  383 (419)
                       ..++.++..+++.+.|+    +.|.+..  ...-|++.-+.+.....  ....    ....+...+ .++||++.+...
T Consensus       326 -l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~~~  401 (443)
T PRK07483        326 -LLANVRARGEQLRARLRERLGQHPHVGD--IRGRGLFVGVELVADRATKAPFDPALKLHARIKREA-MARGLMVYPMGG  401 (443)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhcCCCeee--EeecccEEEEEEeecccccCCCCchhhHHHHHHHHH-HHCCcEEEecCc
Confidence             23334444444444443    3432221  22446666666632100  0000    012344455 567999987431


Q ss_pred             C--C-CCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          384 V--G-LKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       384 ~--~-~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .  + ..+.+|+.+  ..+++++++++++|++++.+..
T Consensus       402 ~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~  439 (443)
T PRK07483        402 TIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL  439 (443)
T ss_pred             cccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            1  1 136899988  4699999999999999998764

>PRK06149 hypothetical protein; Provisional

Probab=99.79  E-value=1.6e-16  Score=165.83  Aligned_cols=345  Identities=14%  Similarity=0.070  Sum_probs=205.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      +|+.++||..|...   .-.-+|.+.+++.+++....... |.. ....++.+.+++.+      +-..+.++++++|++
T Consensus       583 dG~~ylD~~~~~~~---lGh~hp~v~~Ai~~q~~~l~~~~~~~~-~~~~elae~L~~~~------p~~~~~v~f~~SGsE  652 (972)
T PRK06149        583 AGRSYLDMVNNVTV---LGHGHPRLAAAAARQWSLLNTNSRFHY-AAVAEFSERLAALA------PDGLDTVFLVNSGSE  652 (972)
T ss_pred             CCCEEEECCCCccc---cCCCCHHHHHHHHHHHHhccccccccC-HHHHHHHHHHHHhC------CCCcCEEEEeCCchH
Confidence            58889999877532   12268999999999987643221 211 12234444444443      223468999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-C-----C--------EEEEEeccCC--CCcc-cC-----hHHHH
Q 014769          119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-Q-----V--------EVRHFDLLPE--RNWE-VD-----LDAVE  174 (419)
Q Consensus       119 al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~~-----~~~l~  174 (419)
                      |++.+++....  ....|+...-+|++....+... +     .        .+..++....  ..+. .+     .+.++
T Consensus       653 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~  732 (972)
T PRK06149        653 ANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVV  732 (972)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHH
Confidence            99999985432  2367888888888754322111 0     0        0111211100  0011 11     13333


Q ss_pred             Hhhc-----CCccEEEEeCC--CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769          175 ALAD-----KNTAAMVIINP--GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL  247 (419)
Q Consensus       175 ~~~~-----~~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  247 (419)
                      ..++     .+..+.+|+.|  .+-.....|+++++++.++|++||+++|+||++.++...|..+..+..++..+.++  
T Consensus       733 ~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--  810 (972)
T PRK06149        733 AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--  810 (972)
T ss_pred             HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--
Confidence            3221     23455667777  33334568899999999999999999999999988765554332333333333334  


Q ss_pred             ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh--hhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD--CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI  325 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  325 (419)
                       +++|.+ ..|+++|.+++++        ++++.+..  ....+++.++++..++.+.|+...++.   ..++.++..++
T Consensus       811 -t~gK~l-g~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~---l~~~~~~~G~~  877 (972)
T PRK06149        811 -TMAKGM-GNGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEK---LQENARRVGDH  877 (972)
T ss_pred             -Eecccc-cCCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence             678995 4689999999976        57776653  112235678888888888887543322   23344444444


Q ss_pred             HHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ec
Q 014769          326 CYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CA  396 (419)
Q Consensus       326 l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~  396 (419)
                      +.+.|++    .|.+..  .-.-|+++-+.+.........+   ...+...+ .++||++.+....  .+.+||.+  ..
T Consensus       878 l~~~L~~l~~~~~~i~~--vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l-~~~Gvl~~~~g~~--~~vl~~~Ppl~i  952 (972)
T PRK06149        878 LKARLEALADRHPLIGA--VHGMGLYLGVELVRDRQTLEPATEETAAICDRL-LELGVIMQPTGDH--LNILKIKPPLCL  952 (972)
T ss_pred             HHHHHHHHHHhCCCeEE--EeecceEEEEEEecCcccCCCChHHHHHHHHHH-HhCCeEEeecCCC--CCEEEEECCCcC
Confidence            5555443    332221  2234666666663110000001   23455555 5679999875321  36799887  47


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 014769          397 EPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       397 ~~~~l~~~l~~l~~~~~~  414 (419)
                      +++++++++++|.+++.+
T Consensus       953 t~~~id~~~~~l~~~l~~  970 (972)
T PRK06149        953 DRESADFFVDMLDRVLTE  970 (972)
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            999999999999999875

>PLN03032 serine decarboxylase; Provisional

Probab=99.79  E-value=1.2e-15  Score=141.75  Aligned_cols=338  Identities=13%  Similarity=0.049  Sum_probs=212.8

Q ss_pred             HHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC---CCCCCCCCHHHHHHHHHHHHhhCC
Q 014769           26 KTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN---CYATNSGIPPARRAIADYLSRDLP  102 (419)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~~  102 (419)
                      .++++++...+.++.     .+..|.|..   ........+++...+.+...+   .+.-.....++.+.+.+++.+.+|
T Consensus         9 ~~~~~~~~~~~~~~~-----~~~~gy~~~---~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg   80 (374)
T PLN03032          9 ADILASYDKLLAEKS-----SVHFGYPYN---LDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE   80 (374)
T ss_pred             HHHHHHHHHHHHHhh-----hhccCCCch---hccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC
Confidence            344555555444321     234555432   112334566666665432111   111111346677777777766666


Q ss_pred             CCCCCCcE--EEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc
Q 014769          103 YKLSADDV--YVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD  178 (419)
Q Consensus       103 ~~~~~~~i--~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~  178 (419)
                        .+++++  ++|+|+|+++..++.....  +++.|++..-.|++....++.+|..+..+++++  ++.+|+++|+++++
T Consensus        81 --~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~  156 (374)
T PLN03032         81 --LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALA  156 (374)
T ss_pred             --CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHH
Confidence              355665  9999999999988876542  456888889999999999999999988888754  45799999999997


Q ss_pred             C---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC-----CeEEEcccccccccCC-CCCCCccccCCCCcEEEEec
Q 014769          179 K---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR-----VMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGS  249 (419)
Q Consensus       179 ~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-----~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s  249 (419)
                      +   ++.+|+++..+|+||.+-|   +++|.++|+++|     +++++|.+|+++...- ...+.+ .+.. .-..+..|
T Consensus       157 ~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~-~~~~-~vDSis~s  231 (374)
T PLN03032        157 KNRDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEV-TFRK-PIGSVSVS  231 (374)
T ss_pred             HcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCccc-CCCc-CCcEEEEC
Confidence            6   3567777888999999998   889999999986     5899999998743210 000111 1111 11234558


Q ss_pred             CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                      .+|.+ .....+|.+++++.        ..+.+.....        ..++-+.....++-..|.....+.+.++.++..+
T Consensus       232 ~HK~~-g~P~g~G~ll~r~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~  302 (374)
T PLN03032        232 GHKFL-GCPMPCGVALTRKK--------HVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMR  302 (374)
T ss_pred             ccccc-CCCcCeEEEEEEch--------hhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            99984 44566999998762        3333322111        1122222222333334444446788899999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHH
Q 014769          322 SAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPS  399 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~  399 (419)
                      +.+++.+.|++. ++.++..|.... +.++-+.        +.    .+ . +|..+.+-     .+++|+++  ..+.+
T Consensus       303 ~a~~l~~~l~~~-~~~~~~~p~~~~-V~f~~~~--------~~----~~-~-~~w~l~~~-----~~~~hi~vm~~~~~~  361 (374)
T PLN03032        303 NAHYLKDRLTEA-GLTCRLNELSST-VVFERPM--------DE----AF-I-KKWQLACE-----GDIAHVVVMPNVTVE  361 (374)
T ss_pred             HHHHHHHHHHhC-CCcEEECCCceE-EEEcCCC--------cH----hH-h-heeeeccc-----CCEEEEEECCCCCHH
Confidence            999999999886 666555666443 3333331        11    12 2 35655542     35889998  35779


Q ss_pred             HHHHHHHHHHH
Q 014769          400 ALKDGLGRMKA  410 (419)
Q Consensus       400 ~l~~~l~~l~~  410 (419)
                      .++++++.|++
T Consensus       362 ~id~fi~dl~~  372 (374)
T PLN03032        362 KLDEFVEELVE  372 (374)
T ss_pred             HHHHHHHHHhc
Confidence            99999988875

>PRK12403 putative aminotransferase; Provisional

Probab=99.79  E-value=3.1e-16  Score=150.89  Aligned_cols=353  Identities=16%  Similarity=0.133  Sum_probs=203.3

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +...+|+.+|||..|.-+..-. .-+|.+.+++.++++....  +... .+..+....+++.+....+  ...+.+++++
T Consensus        48 l~D~dG~~ylD~~~g~~~~~lG-h~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~  122 (460)
T PRK12403         48 LWDNDGKRYLDGMSGLWCTNLG-YGRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIYTN  122 (460)
T ss_pred             EEeCCCCEEEECchhHHhhcCC-CCCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence            3344688999998883322112 2579999999999876332  1111 1223444445555443222  2236899999


Q ss_pred             cHHHHHHHHHHHhcC-------CCC-eEEeeCCCCCCcHHHHhhc-CCE-----------EEEEeccCC--CCccc----
Q 014769          115 GCKQAVEVILSVLAR-------PGA-NVLLPRPGWPYYEGIAQRK-QVE-----------VRHFDLLPE--RNWEV----  168 (419)
Q Consensus       115 g~~~al~~~~~~l~~-------~gd-~vlv~~p~~~~~~~~~~~~-g~~-----------~~~~~~~~~--~~~~~----  168 (419)
                      ++++|++.+++....       +++ .|+....+|++........ +..           +..++.+..  .++..    
T Consensus       123 SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  202 (460)
T PRK12403        123 SGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAE  202 (460)
T ss_pred             CcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHH
Confidence            999999999998742       233 3555677888753322221 111           111111000  00011    


Q ss_pred             ----ChHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          169 ----DLDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       169 ----~~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                          +.+.+++.+.   .+..+.+|+.| ..-.|. ..+.++++++.++|++||+++|+||++.++...|..+. ...++
T Consensus       203 ~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~g  281 (460)
T PRK12403        203 FGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFG  281 (460)
T ss_pred             HHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcC
Confidence                1244544442   13345566676 445565 46889999999999999999999999988766554322 22233


Q ss_pred             CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHHH
Q 014769          240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      ..+.++   +++|.+ ..| +++|.+++++        ++.+.+...     ...+++.++++..++.+.|+...++.  
T Consensus       282 v~PDiv---~~gK~l-ggG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~--  347 (460)
T PRK12403        282 FEPDTL---SIAKGL-TSGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEG--  347 (460)
T ss_pred             CCCCeE---EEcccc-cccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcc--
Confidence            333334   478995 457 4899988865        566666421     12355678888888888877543222  


Q ss_pred             HHHHHHH-HHHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCccccc--CCCC----HHHHHHHHHHhcCeEeecCC
Q 014769          314 KLIDTLR-ESAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLLE--DIND----DIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       314 ~~~~~~~-~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~~--~~~~----~~~~~~~ll~~~gv~v~~g~  382 (419)
                       ..++++ ++.+++.+.|+    +.+.+.  ....-|.+..+.+......  ....    ...+... +.++||.+.+..
T Consensus       348 -l~~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~~  423 (460)
T PRK12403        348 -VVTRVKDDTGPYLQRCLREVFGDHPLVG--EVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTI-GFEEGVIIRSTL  423 (460)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHhcCCCEE--eEeecceEEEEEEccCccccccccchhHHHHHHHHH-HHhCCEEEEecC
Confidence             233332 33444444443    343222  1234466666666321100  0000    1122223 356799997532


Q ss_pred             CCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          383 YVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       383 ~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                           +.+|+++.  .++++++++++.+++++.+..+
T Consensus       424 -----~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~  455 (460)
T PRK12403        424 -----GRMIMAPALVAGRAEIDELVDKTRIAVDRTAR  455 (460)
T ss_pred             -----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                 45788884  5999999999999999988754

>PRK07480 putative aminotransferase; Validated

Probab=99.79  E-value=1.5e-16  Score=152.86  Aligned_cols=355  Identities=13%  Similarity=0.094  Sum_probs=207.0

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|..... .-.-+|.+.+++.++++...... .......+.+..+++.+.+..+  .+.+.++++++
T Consensus        44 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~S  119 (456)
T PRK07480         44 LWDSEGNKILDGMAGLWCVN-VGYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNS  119 (456)
T ss_pred             EEeCCCCEEEEccchHHHhc-CCCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCC
Confidence            33456899999988743221 12357999999999987643211 0001223455555555554332  23468999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-E------------EEEEeccCCC--CcccC---
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-E------------VRHFDLLPER--NWEVD---  169 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-~------------~~~~~~~~~~--~~~~~---  169 (419)
                      +++|++.+++....       ++ .+|+....+|++........+. .            +..++.+...  .+..+   
T Consensus       120 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  199 (456)
T PRK07480        120 GSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEE  199 (456)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHH
Confidence            99999999987632       23 4688888899875432222111 0            0111100000  00001   


Q ss_pred             -----hHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          170 -----LDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       170 -----~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                           ++.+++.+.   .+..+.+|..| +.-.|. ..|.++++++.++|++||+++|+||++.+|...|..+ ....++
T Consensus       200 ~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~g  278 (456)
T PRK07480        200 FGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFG  278 (456)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcC
Confidence                 244544332   13345566666 444566 5788999999999999999999999999875555432 222333


Q ss_pred             CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh----h-hccccCCchHHHHHHHHHHcccchHHHH
Q 014769          240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD----C-LSIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      ..+.++   +++|.+ ..| +++|.+++++        ++.+.+..    . ...+++.++++..++.+.|+...++.  
T Consensus       279 v~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~--  344 (456)
T PRK07480        279 IKPDLM---TIAKGL-TSGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEG--  344 (456)
T ss_pred             CCCCee---eeehhh-ccCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCC--
Confidence            333333   678985 456 4899999865        57776631    1 23366788888888888887643222  


Q ss_pred             HHHHHH-HHHHHHHHHHhh---cCCCCCCCCCCCceEEEEeecCcccc--cCCCC---HHHHHHHHHHhcCeEeecCCCC
Q 014769          314 KLIDTL-RESAEICYDGVK---EIPCISCPNKPEGSMVTMVKLNPWLL--EDIND---DIEFALKLAKEESVIVTPGIYV  384 (419)
Q Consensus       314 ~~~~~~-~~~~~~l~~~l~---~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gv~v~~g~~~  384 (419)
                       ..+++ +++.+++.+.|+   +.|.+..  ...-|++.-+.+.....  ....+   ....+...+.++||++.+.   
T Consensus       345 -l~~~~~~~~g~~l~~~l~~l~~~~~i~~--vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---  418 (456)
T PRK07480        345 -IVERVRDDTGPYLQKRLRELADHPLVGE--VRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV---  418 (456)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhhcCCCeee--EEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec---
Confidence             22333 233344444443   3332221  22346666666632110  00001   1122333345689999763   


Q ss_pred             CCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          385 GLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       385 ~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                        .+.+|+++.  .++++|++++++|.+++.+..+
T Consensus       419 --~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~  451 (456)
T PRK07480        419 --GDRMIISPPLVITHAEIDELVEKARKALDATAA  451 (456)
T ss_pred             --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence              257899984  4899999999999999987644

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.79  E-value=1.4e-16  Score=153.23  Aligned_cols=352  Identities=13%  Similarity=0.070  Sum_probs=210.3

Q ss_pred             hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ...+|+.+|||..|.-... .-.-+|.+.+++.+++......  ....-..+.+..+++.+.+..  +...+.+++++++
T Consensus        51 ~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~l~~~--~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SG  125 (460)
T PRK06916         51 YDVNGNEYYDGVSSIWLNV-HGHQVPELDEAIREQLNKIAHS--TLLGLANVPSILLAEKLIEVV--PEGLKKVFYSDSG  125 (460)
T ss_pred             EeCCCCEEEEcchhHHHhh-cCCCCHHHHHHHHHHHHhCCCc--cccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCc
Confidence            3446889999987742211 1235789999999998763211  000011233444555554422  2223689999999


Q ss_pred             HHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCC--Ccc------
Q 014769          117 KQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPER--NWE------  167 (419)
Q Consensus       117 ~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~------  167 (419)
                      ++|++.+++....       +| .+|+....+|++....+...+.             .+..++.....  .+.      
T Consensus       126 seAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~  205 (460)
T PRK06916        126 ATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEI  205 (460)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence            9999999987642       33 6899999999986543332211             11122211000  000      


Q ss_pred             --cChHHHHHhhcC--CccEEEEeCC--CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          168 --VDLDAVEALADK--NTAAMVIINP--GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       168 --~~~~~l~~~~~~--~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                        .+++.+++.++.  +..+.+|+.|  +.-.|.+ .|.++++++.++|+++|+++|.||++.++...|..+ ....++.
T Consensus       206 ~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv  284 (460)
T PRK06916        206 VKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENV  284 (460)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCC
Confidence              124555666642  3345566666  5556764 699999999999999999999999998875555432 1222333


Q ss_pred             CCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-------h-hccccCCchHHHHHHHHHHcccchHH
Q 014769          241 IVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-------C-LSIYSDIPTFIQGAIPQILEKTKEDF  311 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~~~a~~~~l~~~~~~~  311 (419)
                      .+.++   +++|.+ ..| +++|.+++++        ++.+.+..       . ...+++.++++..++.+.|+....+ 
T Consensus       285 ~PDiv---~~gK~l-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~-  351 (460)
T PRK06916        285 TPDIM---TAGKGL-TGGYLPIAITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKT-  351 (460)
T ss_pred             CCCee---eeehhh-hcCccccceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhc-
Confidence            33334   578995 467 5999999875        56665532       1 1234566888888877777653222 


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccc--cCCC-C---HHHHHHHHHHhcCeEeecCC
Q 014769          312 FCKLIDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLL--EDIN-D---DIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~--~~~~-~---~~~~~~~ll~~~gv~v~~g~  382 (419)
                        ...++++++.+++.+.|+++   +.+..  ...-|.++-+.+.....  .... +   ...+...+ .++||++.|. 
T Consensus       352 --~l~~~~~~~g~~l~~~l~~l~~~~~v~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~-  425 (460)
T PRK06916        352 --NLIEQVARKTEYVATQLEDLFALKHVGD--IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRS-RELGMLTRPL-  425 (460)
T ss_pred             --cHHHHHHHHHHHHHHHHHHhhcCCCeEE--eecCCceeeEEeecccccccCCCchhhHHHHHHHHH-HHCCeEEEec-
Confidence              23345555555666665543   22211  22335555555532110  0000 1   12444444 5689999874 


Q ss_pred             CCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          383 YVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       383 ~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                          .+.+|+.+  ..++++|++++++|+++++++..
T Consensus       426 ----g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06916        426 ----GNTIVFMPPLASTIDELDEMLRILYKAISDVTE  458 (460)
T ss_pred             ----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence                25788886  57999999999999999987654

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.79  E-value=2.8e-16  Score=150.34  Aligned_cols=344  Identities=14%  Similarity=0.090  Sum_probs=205.7

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|.-... .-.-+|.+.+++.+++.......+.     .+.+..+++.+.+..+   ..+.++++++++
T Consensus        49 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~l~~~~p---~~~~v~f~~sGs  119 (428)
T PRK12389         49 DVDGNKYIDYLAAYGPII-TGHAHPHITKAITEAAENGVLYGTP-----TELEIEFAKMLKEAIP---SLEKVRFVNSGT  119 (428)
T ss_pred             eCCCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCCccCCC-----CHHHHHHHHHHHHhCC---CCcEEEEeCCHH
Confidence            446889999988843321 1235799999999999865432222     2344555555544222   246899999999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CCEEEEE------eccC---CCCc---ccChHHHHHhhcC--C
Q 014769          118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QVEVRHF------DLLP---ERNW---EVDLDAVEALADK--N  180 (419)
Q Consensus       118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~~~~~~------~~~~---~~~~---~~~~~~l~~~~~~--~  180 (419)
                      +|++.+++.... .| .+|+....+|++....+... +......      ...+   .+..   -.|++.+++.+..  +
T Consensus       120 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  199 (428)
T PRK12389        120 EAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGD  199 (428)
T ss_pred             HHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCC
Confidence            999999987643 23 67888899999865443322 1111000      0000   0000   1267788777753  2


Q ss_pred             ccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          181 TAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       181 ~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ..+.++..| ....|.+ .+.+++++|.++|+++|+++|+||++.++. .+... ....++..++++   +++|.+ ..|
T Consensus       200 ~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~~~-a~~~~gv~PDiv---t~gK~l-ggG  273 (428)
T PRK12389        200 EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMYGG-AQDLLGVEPDLT---ALGKII-GGG  273 (428)
T ss_pred             cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCcch-hhHHhCCCCCee---eechhh-cCC
Confidence            345566666 5556764 579999999999999999999999999873 22111 111122222233   678995 568


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc--
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE--  332 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~--  332 (419)
                      +++|.+++++        ++++.+...    ...+++.++++..++.+.|+....+   ...++++++.+++.+.|++  
T Consensus       274 ~Pi~av~~~~--------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~  342 (428)
T PRK12389        274 LPIGAYGGRK--------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAA  342 (428)
T ss_pred             CceeEEeEHH--------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHH
Confidence            9999998865        577766421    2235567888888888877754322   2334455555555555543  


Q ss_pred             --CCCCCCCCCCCceEEEEeecCcccccC-----CCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHH
Q 014769          333 --IPCISCPNKPEGSMVTMVKLNPWLLED-----IND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALK  402 (419)
Q Consensus       333 --~~~~~~~~~p~~g~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~  402 (419)
                        ++.+..+ .-..|++ -+.+.......     ..+   ...+...+ .++||.+.+..    .+.+.+++..++++|+
T Consensus       343 ~~~~~~~~v-~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~----~~~~~~~l~~t~e~id  415 (428)
T PRK12389        343 EKHGITITI-NRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLM-LNQGINLAPSK----YEAWFLTTAHTEEDIE  415 (428)
T ss_pred             HhCCCCEEE-EecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHH-HHCCcEeecCC----CCCeeecCCCCHHHHH
Confidence              4311111 1223433 23332111000     001   23444444 56899998752    1234667778999999


Q ss_pred             HHHHHHHHHHHH
Q 014769          403 DGLGRMKAFCQR  414 (419)
Q Consensus       403 ~~l~~l~~~~~~  414 (419)
                      ++++.+++++++
T Consensus       416 ~~~~~l~~~l~~  427 (428)
T PRK12389        416 ETLEAVDRAFAQ  427 (428)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999865

>PRK07036 hypothetical protein; Provisional

Probab=99.79  E-value=2.3e-16  Score=151.93  Aligned_cols=352  Identities=15%  Similarity=0.148  Sum_probs=209.8

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +...+|+.+|||..|..+.. .-.-+|.+.+++.+++....+ ..+.  ....+.+..+++.+.+..+  ...+.+++++
T Consensus        45 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~  119 (466)
T PRK07036         45 VTDADGRRYLDGIGGMWCVN-VGYGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAP--GDLNHVFLTT  119 (466)
T ss_pred             EEECCCCEEEECcccHHhhc-CCCCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence            44456999999988843322 123579999999999875321 1111  0123455556666654322  2246899999


Q ss_pred             cHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCC--CCcccC--
Q 014769          115 GCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPE--RNWEVD--  169 (419)
Q Consensus       115 g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~~~--  169 (419)
                      ++++|++.+++....       ++ .+|+....+|++....+.....             .+..++.+..  ..++.+  
T Consensus       120 sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  199 (466)
T PRK07036        120 GGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEA  199 (466)
T ss_pred             CchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChH
Confidence            999999999987531       22 6789999999886543322211             1112221110  001111  


Q ss_pred             ------hHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc-c
Q 014769          170 ------LDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-L  237 (419)
Q Consensus       170 ------~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~  237 (419)
                            ++.+++.+.   .+..+.+|+.| +...|. ..|.++++++.++|++||+++|+||++.++...|..+ .+. .
T Consensus       200 ~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~  278 (466)
T PRK07036        200 AFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAV  278 (466)
T ss_pred             HHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhh
Confidence                  233444442   23445566666 444566 5789999999999999999999999998875555322 222 2


Q ss_pred             cCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-------hh-ccccCCchHHHHHHHHHHcccc
Q 014769          238 FGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-------CL-SIYSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~~~a~~~~l~~~~  308 (419)
                      ++..+.++   +++|.+ ..| +++|.+++++        ++.+.+..       +. ..+++.++++..++.+.|+...
T Consensus       279 ~gv~PDiv---t~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~  346 (466)
T PRK07036        279 FGIQPDII---TFAKGL-TSGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIME  346 (466)
T ss_pred             cCCCCCEE---EEcccc-ccCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHH
Confidence            23333333   578995 457 5899999875        57666642       11 2256678888888888776532


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCcccc-c-CCCC----HHHHHHHHHHhcCeEee
Q 014769          309 EDFFCKLIDTLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLL-E-DIND----DIEFALKLAKEESVIVT  379 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~-~-~~~~----~~~~~~~ll~~~gv~v~  379 (419)
                      ++   ...++++++.+++.+.|++   .|.+.  ....-|.++.+.+..... . ....    ...+...+ .++||++.
T Consensus       347 ~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~--~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~  420 (466)
T PRK07036        347 RE---GLCEHVREVGPYFEERLASLRELPLVG--DVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHC-QERGLLVR  420 (466)
T ss_pred             hC---CHHHHHHHHHHHHHHHHHHhccCCCEE--EEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHH-HHCCcEEe
Confidence            22   2334445555555555543   32221  122346666777742110 0 0001    12444444 66899997


Q ss_pred             cCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          380 PGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       380 ~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +..     +.+|+++  ..++++|+++++++.++++++.
T Consensus       421 ~~~-----~~~~l~Ppl~it~~~id~~~~~l~~al~~~~  454 (466)
T PRK07036        421 PLE-----HLCVLSPPLIITRAQIDEIVAILRAAIEETA  454 (466)
T ss_pred             ecC-----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence            642     4688886  4699999999999999997763

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.79  E-value=1.6e-16  Score=144.06  Aligned_cols=182  Identities=20%  Similarity=0.101  Sum_probs=137.7

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  160 (419)
                      -...+.+.+++..        +..+++++++|+.|+..++..++.+|+.|+.....|.+...++    ...|+....+.+
T Consensus        78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~  149 (409)
T KOG0053|consen   78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV  149 (409)
T ss_pred             chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence            4467888888775        3466999999999999999999999999999999999865444    455666666543


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             -+++.++.++.+++++|++-+|.||+..+.+   ++++.++|+++|+++|+|+.+....+.     ....++.
T Consensus       150 -------~~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~-----~pL~lGA  214 (409)
T KOG0053|consen  150 -------DDLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ-----DPLPLGA  214 (409)
T ss_pred             -------hhHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc-----ChhhcCC
Confidence                   2678888999989999999999999999998   888999999999999999999864321     1223444


Q ss_pred             CCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGA  299 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a  299 (419)
                      +   |++.|.+|.++..+-= .|.++.+.       .++.+.++.... ..+.+++.....
T Consensus       215 D---IV~hSaTKyi~Ghsdvi~G~iv~n~-------~~~~~~l~~~~~~lg~~~~p~~~~l  265 (409)
T KOG0053|consen  215 D---IVVHSATKYIGGHSDVIGGSVVLNS-------EELASRLKFLQEDLGWCEDPFDLFL  265 (409)
T ss_pred             C---EEEEeeeeeecCCcceeeeEEecCc-------HHHHHHHHHHHHHhcCCCCHHHHHH
Confidence            4   9999999998776544 45555542       257777776653 345555554433

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.79  E-value=1.6e-16  Score=152.53  Aligned_cols=343  Identities=15%  Similarity=0.109  Sum_probs=203.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..|..... .-..+|.+.+++.+++.....  +..   ..+.+..+++.+.+..+   ..+.+.+++++++
T Consensus        96 ~dG~~yiD~~~g~g~~~-lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsE  166 (474)
T PLN02482         96 VDGNEYIDYVGSWGPAI-IGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTE  166 (474)
T ss_pred             CCCCEEEEecccccccc-cCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHH
Confidence            35888999988743321 123579999999999986543  222   12455566666655332   2479999999999


Q ss_pred             HHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHh-hcCCEEEEE--ecc---CC----C----CcccChHHHHHhhcC--C
Q 014769          119 AVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQ-RKQVEVRHF--DLL---PE----R----NWEVDLDAVEALADK--N  180 (419)
Q Consensus       119 al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~-~~g~~~~~~--~~~---~~----~----~~~~~~~~l~~~~~~--~  180 (419)
                      |.+.+++.... .| .+|+....+|+++...+. ..+......  +..   +.    .    .+ -|++.+++.+..  +
T Consensus       167 A~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~  245 (474)
T PLN02482        167 ACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKG  245 (474)
T ss_pred             HHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCC
Confidence            99999987643 23 688888999998653211 110000000  000   00    0    00 167888877753  3


Q ss_pred             ccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          181 TAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       181 ~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ..+.+|+.| ....|.+ .+.++|+++.++|++||+++|+||++.++ ..+... ....++..+.+   .+++|.+ ..|
T Consensus       246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~g-a~~~~gv~PDi---~t~gK~l-ggG  319 (474)
T PLN02482        246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGG-AQEYFGITPDL---TTLGKVI-GGG  319 (474)
T ss_pred             ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcch-HhHHhCCCCCE---EEecchh-hCC
Confidence            345666777 4556765 45899999999999999999999999877 333221 11122322223   3679996 478


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC-
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI-  333 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-  333 (419)
                      +++|.+++++        ++++.+...    ...+++.++++..++.+.|+....   +...+++.++.+++++.|+++ 
T Consensus       320 ~Pigav~g~~--------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~  388 (474)
T PLN02482        320 LPVGAYGGRR--------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAG  388 (474)
T ss_pred             CceEEEEEcH--------HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence            9999998865        677776521    122445677777777777765322   123444555555555555442 


Q ss_pred             --CCCCCCCCCCceEEEEeecCcccc---cC--CCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHH
Q 014769          334 --PCISCPNKPEGSMVTMVKLNPWLL---ED--IND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKD  403 (419)
Q Consensus       334 --~~~~~~~~p~~g~~~~~~~~~~~~---~~--~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~  403 (419)
                        -++.++....+|++. +.+.....   ..  ..+   ...+...+ .++||++.|...   +.+ -+++..++++|++
T Consensus       389 ~~~g~~~~~~~v~g~~g-i~f~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~Gv~~~~~~~---~~~-~psl~ht~~dId~  462 (474)
T PLN02482        389 KKAGHEMCGGYISGMFG-FFFTEGPVYNFADAKKSDTAKFARFHRGM-LEEGVYLAPSQF---EAG-FTSLAHTEEDIDF  462 (474)
T ss_pred             HhcCCCEEEcccceEEE-EEEecCCccChhhhccCCHHHHHHHHHHH-HHCCeEEeccCC---CCC-cCCCCCCHHHHHH
Confidence              022211122234432 22211000   00  011   12455555 567999987432   111 1566789999999


Q ss_pred             HHHHHHHHHHH
Q 014769          404 GLGRMKAFCQR  414 (419)
Q Consensus       404 ~l~~l~~~~~~  414 (419)
                      +++.+++++++
T Consensus       463 ~l~al~~~l~~  473 (474)
T PLN02482        463 TIAAAERVLAR  473 (474)
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

>PRK07481 hypothetical protein; Provisional

Probab=99.79  E-value=6.1e-16  Score=148.61  Aligned_cols=354  Identities=14%  Similarity=0.089  Sum_probs=209.5

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|.-+.. .-.-+|.+.+++.+++.......... ....+.+..+++.+.+..+ +-..+.++++++
T Consensus        36 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~s  112 (449)
T PRK07481         36 VYDIDGKKLLDGVGGLWNVN-VGHNREEVKEAIVRQLDELEYYSTFD-GTTHPRAIELSYELIDMFA-PEGMRRVFFSSG  112 (449)
T ss_pred             EEeCCCCEEEECchhHHhhc-CCCCCHHHHHHHHHHHHhccceeccc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCc
Confidence            44456999999988743321 12357899999999987643211100 0123445556666654332 112468999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCC--Ccc-cChH
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPER--NWE-VDLD  171 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~-~~~~  171 (419)
                      +++|++.+++....       +| .+|+....+|++....+.....             .+..++.+...  .+. -|.+
T Consensus       113 GsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~  192 (449)
T PRK07481        113 GSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPE  192 (449)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHH
Confidence            99999999987642       23 5799999999986543322211             11111111000  011 1333


Q ss_pred             H--------HHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          172 A--------VEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       172 ~--------l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                      .        +++.+.   .+..+.+|+.| +.-.|. ..+.++++++.++|+++|+++|.||++.++...|..+. ...+
T Consensus       193 ~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~  271 (449)
T PRK07481        193 ELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGW  271 (449)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhc
Confidence            3        233332   23445566666 444566 57899999999999999999999999998765554321 2223


Q ss_pred             CCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccch
Q 014769          239 GSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~  309 (419)
                      +..+.++   +++|.+ ..| +++|.+++++        ++++.+...        ...+++.++++..++.+.|+...+
T Consensus       272 gv~PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~  339 (449)
T PRK07481        272 GVKPDIM---CLAKGI-TSGYVPLGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR  339 (449)
T ss_pred             CCCCCEE---EEeecc-cCCCcCceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence            3333344   468984 457 5899999875        566666431        123566788888888887765332


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc-cc-CCC----CHHHHHHHHHHhcCeEee
Q 014769          310 DFFCKLIDTLRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL-LE-DIN----DDIEFALKLAKEESVIVT  379 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~-~~-~~~----~~~~~~~~ll~~~gv~v~  379 (419)
                      +.   ..++.++..+++.+.|++    +|.+.  ....-|.++.+.+.... .. ...    ....+...+ .++||++.
T Consensus       340 ~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~  413 (449)
T PRK07481        340 ED---LPANAAKRGAYLLEGLQPLKERFELVG--DVRGKGLMLALDLVADKATREPIDPSKGYANAVADVA-RENGVLVR  413 (449)
T ss_pred             hh---HHHHHHHHHHHHHHHHHHHhhcCCCeE--EEeecceEEEEEecccccccCCCCchhHHHHHHHHHH-HhCCeEEE
Confidence            22   233444444445555443    32221  12234666666663210 00 000    012344444 56899998


Q ss_pred             cCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          380 PGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       380 ~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +..     +.+|+++  ..++++|+++++.+.++++++.
T Consensus       414 ~~g-----~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~  447 (449)
T PRK07481        414 PSG-----TKIILSPPLVIQREDVDRIVDALDAGLSAVP  447 (449)
T ss_pred             ecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            742     3589997  4699999999999999998753

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.78  E-value=6.4e-17  Score=151.39  Aligned_cols=314  Identities=12%  Similarity=0.063  Sum_probs=195.7

Q ss_pred             CCChHHHHHHHHHHHhCCC-CCCCCC--CCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEc-ccHHHHHHHHHHHhcCCCC
Q 014769           58 FRTAVEAEDAIVDAVRSGK-FNCYAT--NSGIPPARRAIADYLSRDLPYKLS-ADDVYVT-LGCKQAVEVILSVLARPGA  132 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~-~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t-~g~~~al~~~~~~l~~~gd  132 (419)
                      ...++.+++++........ .+.+.+  ..-+.+.|+.+++++      +++ ..+|+++ +|+|.+++.++..+..+ +
T Consensus        12 ~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~   84 (361)
T TIGR01366        12 SKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF------SLPDGYEVILGNGGATAFWDAATFGLIEK-K   84 (361)
T ss_pred             cCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchhHHHHHHHHhcccc-c
Confidence            3577889998765421110 112222  234467788888887      443 3478775 66999999999998743 3


Q ss_pred             eEEeeCCCCCC-cHHHHhhc--CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHH
Q 014769          133 NVLLPRPGWPY-YEGIAQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA  209 (419)
Q Consensus       133 ~vlv~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~  209 (419)
                      .+++....|.. +...+...  +.++..++.+.  +..++.     .+.++++.|.+++..|.||...|   +++|   +
T Consensus        85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~lV~~~h~et~tG~~~p---i~~I---~  151 (361)
T TIGR01366        85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPEP-----QADPGVDVIAWAHNETSTGVAVP---VRRP---E  151 (361)
T ss_pred             ccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCCC-----ccCCCCCEEEEcccCCccceecc---cccc---c
Confidence            44444444532 23333331  22556665432  222332     34568899999999999999999   5555   4


Q ss_pred             HhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH------
Q 014769          210 RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK------  283 (419)
Q Consensus       210 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~------  283 (419)
                      +++|+++++|.+++.    +..+..+..     ..+++.|.+|.++.+|. ++.+++++        +..+++.      
T Consensus       152 ~~~g~~~iVDavqs~----g~~~idv~~-----~D~~~~s~~K~lg~~~G-l~~~~~s~--------~~~~~~~~~~~~~  213 (361)
T TIGR01366       152 GSDDALVVIDATSGA----GGLPVDIAE-----TDVYYFAPQKNFASDGG-LWLAIMSP--------AALERIEAIAASG  213 (361)
T ss_pred             ccCCCeEEEEcCccc----cCCCCCHHH-----CCEEEEEchhhcCCCCc-eEEEEECH--------HHHhhhhcccCCC
Confidence            789999999999987    333333332     22678899999887742 55555544        1222221      


Q ss_pred             --------------hh--hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---
Q 014769          284 --------------DC--LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKPE---  343 (419)
Q Consensus       284 --------------~~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---  343 (419)
                                    ..  ....++++.....++.++++..... .++...++.++..+.+++.+.+++.+..+....   
T Consensus       214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~  293 (361)
T TIGR01366       214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKR  293 (361)
T ss_pred             CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc
Confidence                          11  0223455555555666666654434 477777899999999999999885554221111   


Q ss_pred             ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ......+.+++.     .+..++...| +++||.+.++......+.+|+|+.  .+.++++++++.|+++++++
T Consensus       294 s~~v~~v~~~~g-----~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~  361 (361)
T TIGR01366       294 SQVVGTIDFVDD-----IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL  361 (361)
T ss_pred             ccceEEEECCCc-----cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence            112223344321     2566776666 677999977643323578999993  68999999999999988763

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK06917 hypothetical protein; Provisional

Probab=99.78  E-value=9.8e-16  Score=146.94  Aligned_cols=358  Identities=15%  Similarity=0.104  Sum_probs=212.6

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +...+|+.+|||..|.-... .-.-+|.+.+++.+++....+. +.. .-..+.+..+++.+.+..+  ...+.++++++
T Consensus        25 l~D~dG~~ylD~~~g~~~~~-lGh~hp~v~~Ai~~ql~~~~~~-~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~s   99 (447)
T PRK06917         25 LYDQNGNKYFDGSSGAVTAG-IGHGVKEIADAIKEQAEEVSFV-YRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNS   99 (447)
T ss_pred             EEeCCCCEEEECchhHHhcc-CCCCCHHHHHHHHHHHhhCcCc-ccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCC
Confidence            33456899999988843211 1235899999999998764321 111 0112444555555554322  22358999999


Q ss_pred             HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CCE------------EEEEeccCCCC--ccc----
Q 014769          116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QVE------------VRHFDLLPERN--WEV----  168 (419)
Q Consensus       116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~~~--~~~----  168 (419)
                      +++|++.+++....       +| .+|+....+|++....+... +..            +..++.+....  +..    
T Consensus       100 GsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  179 (447)
T PRK06917        100 GSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPT  179 (447)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHH
Confidence            99999999997631       33 67999999999875443322 110            11111110000  000    


Q ss_pred             ----ChHHHHHhhcC---CccEEEEeCC-CC-cccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          169 ----DLDAVEALADK---NTAAMVIINP-GN-PCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       169 ----~~~~l~~~~~~---~~~~v~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                          +++.++..+..   +..+.+|..| .. -.|. ..|.++++++.++|+++|+++|+||++.++...|..+. ...+
T Consensus       180 ~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a-~~~~  258 (447)
T PRK06917        180 CQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFA-MEHW  258 (447)
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhh-HHhc
Confidence                23455555542   2356667777 33 3444 57899999999999999999999999998755554321 1223


Q ss_pred             CCCCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFF  312 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~  312 (419)
                      +..+.++   +++|.+ ..|+ ++|.+++++        ++++.+...     ...+++.++++..++.+.|+....+  
T Consensus       259 gv~PDi~---~~gK~l-~~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~--  324 (447)
T PRK06917        259 GVEPDIM---TLGKGL-GAGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKH--  324 (447)
T ss_pred             CCCCCEE---Eeeehh-ccCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHC--
Confidence            3223333   678995 4575 899999875        566666432     1235567888888888877753222  


Q ss_pred             HHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCcccc--cCCCC----HHHHHHHHHHhcCeEeecCC
Q 014769          313 CKLIDTLRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLL--EDIND----DIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v~~g~  382 (419)
                       ...++++++.+++.+.|++    .|.+.  ....-|.++.+.+.....  +....    ...+...+ .++||++.|+.
T Consensus       325 -~l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~  400 (447)
T PRK06917        325 -NLPEKAAEKGEYLIKGLQKVQQQSTIIG--DVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVA-AKNGLLLYPAV  400 (447)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHhcCCCEE--EEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHH-HhCCcEEEecc
Confidence             2334455555555555544    32221  122345666666631100  00001    23444444 56899998752


Q ss_pred             C-C-C-CCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          383 Y-V-G-LKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       383 ~-~-~-~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      . . + ..+.+|+++.  .++++|+++++++.+++++..+
T Consensus       401 ~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~  440 (447)
T PRK06917        401 AGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ  440 (447)
T ss_pred             cccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence            1 0 1 1468999974  7999999999999999987643

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.78  E-value=1.5e-15  Score=141.71  Aligned_cols=305  Identities=17%  Similarity=0.167  Sum_probs=199.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH-HHHhhcCCEEEE
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE-GIAQRKQVEVRH  157 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~  157 (419)
                      .|+.+..+.+|++.+++++        ..+.++.+++++.|+++++...+++||.|  +..+|.... ......|..  .
T Consensus        73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~--f  140 (460)
T PRK13237         73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGI--F  140 (460)
T ss_pred             hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcE--E
Confidence            5888888999999999998        33579999999999999877778899965  444444333 325556664  3


Q ss_pred             Eecc----------CCCCcccChHHHHHhhcCC----ccEEEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769          158 FDLL----------PERNWEVDLDAVEALADKN----TAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVY  222 (419)
Q Consensus       158 ~~~~----------~~~~~~~~~~~l~~~~~~~----~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~  222 (419)
                      +.++          ....+.+|++.++++++++    ++.+.+..++|.. |+..|.++++++.++|+++|+.+|+|.+.
T Consensus       141 vDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAr  220 (460)
T PRK13237        141 VDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATR  220 (460)
T ss_pred             EeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcc
Confidence            3332          1235789999999998753    2356677777777 79999999999999999999999999998


Q ss_pred             cccc----------cCCCCCC----CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh--
Q 014769          223 GHLT----------FGSIPYT----PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL--  286 (419)
Q Consensus       223 ~~~~----------~~~~~~~----~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~--  286 (419)
                      ....          |.+....    .+..+.    ...+.|++|.++.+-  -|+++++++       ++.++++...  
T Consensus       221 a~gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D~-------eL~~~~r~~~~~  287 (460)
T PRK13237        221 CVENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMNDE-------ELFDEAKELVVV  287 (460)
T ss_pred             hhcChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECCH-------HHHHHHHHhccc
Confidence            7431          2221110    011222    255668999965551  388877653       6788887663  


Q ss_pred             --cc--ccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc---cc
Q 014769          287 --SI--YSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL---LE  358 (419)
Q Consensus       287 --~~--~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~---~~  358 (419)
                        .+  +++.+.--..+++..|.+.. .+++..+..    +.++|.+.|.+. |+. +..|.+|.-++++.....   .+
T Consensus       288 ~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~----~~~~l~~~L~~~-Gvp-v~~p~ggH~v~vda~~~lph~~~  361 (460)
T PRK13237        288 YEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVG----QVRYLGEKLLAA-GVP-IVEPVGGHAVFLDARRFLPHLPQ  361 (460)
T ss_pred             cCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHH----HHHHHHHHHHHC-CCc-eecCCCceEEEEEhHHhCCCCCc
Confidence              11  12222213334444444322 345544444    445666666665 887 447888988887543210   01


Q ss_pred             CCCCHHHHHHHHHHhcCeEee-cCCC-CCC-----------CCeEEEEee---cCHHHHHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVT-PGIY-VGL-----------KNWLRIAFC---AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~-~g~~-~~~-----------~~~~Ris~~---~~~~~l~~~l~~l~~~~~~  414 (419)
                      ..-....++.+|..+.||.-. -|+. ++.           -..+|+++-   .+.+.++...+.|..+.++
T Consensus       362 ~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~  433 (460)
T PRK13237        362 DQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH  433 (460)
T ss_pred             ccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence            112467888899899999643 2322 111           146999993   4889999999999887754

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.78  E-value=1.5e-15  Score=135.33  Aligned_cols=354  Identities=13%  Similarity=0.097  Sum_probs=229.8

Q ss_pred             CchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC------CCCCCCCCCCHHHHHHHH
Q 014769           21 PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK------FNCYATNSGIPPARRAIA   94 (419)
Q Consensus        21 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia   94 (419)
                      ....|.+++.+-...     .++.|+|=-..      --.++.+.+++-..+.+..      -..|+..+-..++++...
T Consensus        10 ~d~~i~~~i~~e~~r-----q~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~lai   78 (413)
T COG0112          10 YDPEIFEAIQQELER-----QREHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAI   78 (413)
T ss_pred             cCHHHHHHHHHHHHH-----Hhhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHH
Confidence            345667777654332     23456654443      1357888888877765422      234666666678888888


Q ss_pred             HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcC--CEEEEEeccCCCCcccC
Q 014769           95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQ--VEVRHFDLLPERNWEVD  169 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~~  169 (419)
                      +..++.+|..  -.+|-- .+++.|+..++.++.+|||+|+-.+..+.++..   -....|  .+.+.++++++ +..+|
T Consensus        79 erak~LFga~--~anVQP-hSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~ID  154 (413)
T COG0112          79 ERAKKLFGAE--YANVQP-HSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLID  154 (413)
T ss_pred             HHHHHHhCCC--ccccCC-CCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccC
Confidence            8877766633  334444 455778889999999999999988777765421   112222  46667777654 45799


Q ss_pred             hHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCcEEEE
Q 014769          170 LDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVPVITL  247 (419)
Q Consensus       170 ~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~  247 (419)
                      .|++++...+ +|++++.-.-..|  ..++   ++++.++|.+.|.++++|.+|-.. +-+|..+.|+ .+ .   -+++
T Consensus       155 yD~~~k~a~e~kPK~ii~G~SaY~--r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~-~~-A---dvVT  224 (413)
T COG0112         155 YDEVEKLAKEVKPKLIIAGGSAYS--RPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL-PH-A---DVVT  224 (413)
T ss_pred             HHHHHHHHHHhCCCEEEECccccc--cccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC-Cc-c---ceEe
Confidence            9999987765 5555554322222  3345   899999999999999999999654 3344333333 22 2   2889


Q ss_pred             ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI  325 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  325 (419)
                      +|++|+  ++|.|-|.+.++++       ++.+++.....  .-+++......+.+-++.+-....+++..+++.++.+.
T Consensus       225 tTTHKT--lrGPrGG~Il~~~e-------el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAka  295 (413)
T COG0112         225 TTTHKT--LRGPRGGIILTNDE-------ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKA  295 (413)
T ss_pred             CCcccC--CCCCCceEEEeccH-------HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence            999998  68999999998752       68888887532  22333333333334444443345677888889999999


Q ss_pred             HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC-CC-----CCCeEEEEe-----
Q 014769          326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY-VG-----LKNWLRIAF-----  394 (419)
Q Consensus       326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~~-----~~~~~Ris~-----  394 (419)
                      |.+.|.+. |+.++..-.....+.+++....   .  .-..++.+|.+.||.+.--.- |.     .+..|||..     
T Consensus       296 LAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~---~--~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~Tt  369 (413)
T COG0112         296 LAEALKER-GFKVVSGGTDNHLVLVDLRSKG---L--TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTT  369 (413)
T ss_pred             HHHHHHHc-CCeEecCCccceEEEEEcccCC---C--CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhh
Confidence            99999987 8875543344556667776321   1  234456777889998853222 22     257899998     


Q ss_pred             -ecCHHHHHHHHHHHHHHHHH
Q 014769          395 -CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       395 -~~~~~~l~~~l~~l~~~~~~  414 (419)
                       +..++++++..+.|.+++..
T Consensus       370 rG~~e~e~~~Ia~~I~~vl~~  390 (413)
T COG0112         370 RGFGEAEMEEIADLIADVLDG  390 (413)
T ss_pred             cCCCHHHHHHHHHHHHHHHhc
Confidence             23578888888888888764

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.78  E-value=2.2e-16  Score=145.95  Aligned_cols=354  Identities=16%  Similarity=0.091  Sum_probs=218.6

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC---CCCCCCCCHHHHHHHHHHHHhhCCCC-CCCCcEE
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN---CYATNSGIPPARRAIADYLSRDLPYK-LSADDVY  111 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~  111 (419)
                      +...+|+.++|=..|.=+.. .-.-++++.+++.++++.-.+.   .....+ ..+|-+.+++..      + -+-++|+
T Consensus        38 l~d~~G~r~lDg~sg~W~~~-~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a------P~~~l~~vF  109 (449)
T COG0161          38 LTDIDGRRYLDGMSGLWCVN-HGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA------PEGGLDHVF  109 (449)
T ss_pred             EEeCCCCEEEecccHHHHhh-cCcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC------CCCCccEEE
Confidence            33456888888766632211 1235789999999998764321   112222 456666677665      3 2368999


Q ss_pred             EcccHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCC------
Q 014769          112 VTLGCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPE------  163 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~------  163 (419)
                      +++|++++++.+++....       |. .+++.-..+|++-.-.+...|.              .+..++.+..      
T Consensus       110 f~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~  189 (449)
T COG0161         110 FTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFF  189 (449)
T ss_pred             EeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCC
Confidence            999999999999987642       32 3488888999864322222221              1112222110      


Q ss_pred             CCcc----cChHHHHHhhcC---CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769          164 RNWE----VDLDAVEALADK---NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT  233 (419)
Q Consensus       164 ~~~~----~~~~~l~~~~~~---~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  233 (419)
                      ..+.    -..++|++.+..   .+.+.+|..|  +.-+|+ ++|+.+|+++.++|++||+++|.||+-.+|...|+.+.
T Consensus       190 ~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA  269 (449)
T COG0161         190 GEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFA  269 (449)
T ss_pred             CCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhh
Confidence            1111    124556666644   5677788888  333676 57899999999999999999999999999988876543


Q ss_pred             CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHccc
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKT  307 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~  307 (419)
                      . ..++..+.++   +++|.+...-+++|.+++++        ++.+.+..-      ..++++.++++.+++.+.|+-.
T Consensus       270 ~-e~~gi~PDi~---~~aKGLT~GY~Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~  337 (449)
T COG0161         270 C-EHAGIVPDIL---CLAKGLTGGYLPLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDIL  337 (449)
T ss_pred             h-hhcCCCCCee---eecccccccchhhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHH
Confidence            2 3333333344   57898665558888888765        566766653      1346778888888887777653


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCC-CCCceEEEEeecCcccccCC---CCHHHHHHHHHHhcCeEeecCC
Q 014769          308 KEDFFCKLIDTLRESAEICYDGVKE-IPCISCPN-KPEGSMVTMVKLNPWLLEDI---NDDIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~-~p~~g~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~  382 (419)
                      .++.   ..++.++...++.+.|++ +++...|. ...-|++.-+.+....-...   ......+...+.++|++++|..
T Consensus       338 e~e~---l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g  414 (449)
T COG0161         338 EEED---LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG  414 (449)
T ss_pred             HhcC---HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC
Confidence            3222   233344444455555544 32211121 23446666666643211000   0113344455567899999972


Q ss_pred             CCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          383 YVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       383 ~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                           +.+=+++  ..++++|+++++.+.+++++..+
T Consensus       415 -----~~i~~~PPliit~~eid~l~~~l~~al~~~~~  446 (449)
T COG0161         415 -----DVIYLMPPLIITREEIDELVDALREALDETLA  446 (449)
T ss_pred             -----CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence                 3555555  57999999999999999987654

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.77  E-value=3.8e-16  Score=149.19  Aligned_cols=344  Identities=13%  Similarity=0.076  Sum_probs=206.6

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.++||..|..+..- -.-+|.+.+++.+++...........  ..+....+++.+.+..+  -.-+.++++++++
T Consensus        41 d~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~--~~~~~v~f~~sGs  115 (427)
T TIGR00508        41 LDDGRRLIDGMSSWWAAIH-GYNHPRLNAAAQKQIDKMSHVMFGGF--THKPAIELCQKLVKMTP--NALDCVFLADSGS  115 (427)
T ss_pred             eCCCCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCcccccc--CCHHHHHHHHHHHhhCC--CCCCEEEEeCCcH
Confidence            3458999999888433221 24678999999998875331111000  11223334444433222  2236899999999


Q ss_pred             HHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CCE-------------EEEEeccCCCCcc-----cCh
Q 014769          118 QAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QVE-------------VRHFDLLPERNWE-----VDL  170 (419)
Q Consensus       118 ~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~~~  170 (419)
                      ++++.+++....       +| .+|+....+|++....+... +..             ...++. +...+.     -++
T Consensus       116 eA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~  194 (427)
T TIGR00508       116 VAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAI  194 (427)
T ss_pred             HHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHH
Confidence            999999887542       23 67999999999864333222 110             001111 000010     134


Q ss_pred             HHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          171 DAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       171 ~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      +++++.+..  +..+.+++.|  ++-.|. ..+.+++++|.++|+++|+++|+||++.++...|..+.. ..++..+. +
T Consensus       195 ~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pD-i  272 (427)
T TIGR00508       195 TPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPD-I  272 (427)
T ss_pred             HHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCC-E
Confidence            566666542  3345667776  454555 568999999999999999999999999776555543221 12222222 3


Q ss_pred             EEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       246 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                      +  +++|.+ ..| +.++.++.++        ++.+.++..      ...++..++++..++.++|+....+   +..++
T Consensus       273 ~--~~gK~l-~gG~~p~~a~~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~---~~~~~  338 (427)
T TIGR00508       273 L--CVGKAL-TGGYMTLSATVTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEG---EWQKQ  338 (427)
T ss_pred             E--Eechhh-hcCcccceEEEEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHH
Confidence            3  479996 567 4788888765        577777642      1223455777777777777642211   23456


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--
Q 014769          319 LRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--  395 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--  395 (419)
                      ++++.+++.+.|+++.....+. ...-|.+..+.+...     .....+..++ .++||.+.+..     ..+|+++.  
T Consensus       339 ~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gv~~~~~~-----~~l~~~ppl~  407 (427)
T TIGR00508       339 VSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP-----VNVEELQKKF-VEQGVWIRPFG-----KLIYVMPPYI  407 (427)
T ss_pred             HHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc-----cCHHHHHHHH-HHCCeEEEecC-----CEEEEECCCC
Confidence            6666777777776642111010 112255555666421     1345666665 56799997642     47899884  


Q ss_pred             cCHHHHHHHHHHHHHHHHH
Q 014769          396 AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       396 ~~~~~l~~~l~~l~~~~~~  414 (419)
                      .++++|+++++.+++++.+
T Consensus       408 ~t~~~id~~~~~l~~~l~~  426 (427)
T TIGR00508       408 ITTEQLQKLTAALIEALHE  426 (427)
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            7899999999999999864

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.77  E-value=1.9e-15  Score=145.33  Aligned_cols=354  Identities=14%  Similarity=0.077  Sum_probs=208.2

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEc-cc
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVT-LG  115 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t-~g  115 (419)
                      ..+|+.++||..|.-... .-.-+|.+.+++.+++.....  +....-..+.+..+++.+....+.... .+.++++ ++
T Consensus        59 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~S  135 (464)
T PRK06938         59 DVEGRQFIDCLAGAGTLA-LGHNHPVVIEAIQQVLADELP--LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPT  135 (464)
T ss_pred             eCCCCEEEEccCCccccc-cCCCCHHHHHHHHHHHHhhhc--ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCC
Confidence            345889999988853321 123578999999999864321  111011124444555555432221111 1357665 79


Q ss_pred             HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCC--c--------ccCh
Q 014769          116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERN--W--------EVDL  170 (419)
Q Consensus       116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~--------~~~~  170 (419)
                      +++|++.+++.... +| .+|+....+|++....+.....             ++..++......  +        ..++
T Consensus       136 GSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  215 (464)
T PRK06938        136 GTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANL  215 (464)
T ss_pred             cHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHH
Confidence            99999999987643 33 6788889999886543332210             112222211000  0        0125


Q ss_pred             HHHHHhhcC-----CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769          171 DAVEALADK-----NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP  243 (419)
Q Consensus       171 ~~l~~~~~~-----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  243 (419)
                      +.+++.+..     ...+.+|..| +.-.|. ..|.++++++.++|+++|+++|.||++.+|...|..+ ....++..+.
T Consensus       216 ~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PD  294 (464)
T PRK06938        216 HYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPD  294 (464)
T ss_pred             HHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCC
Confidence            666776653     1345667777 444465 4679999999999999999999999999886555422 2223333333


Q ss_pred             EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769          244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES  322 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  322 (419)
                      ++   +++|.+ ..|+++|.+++++        + ++.+... ...+++.++++..++.+.|+...++.+.   ++.++.
T Consensus       295 iv---~~gKgl-ggG~PlsAv~~~~--------~-~~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~---~~~~~~  358 (464)
T PRK06938        295 VV---VLSKAI-GGSLPLAVVVYRE--------W-LDTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLA---EHAAAM  358 (464)
T ss_pred             EE---Eeeccc-cCCCceEEEeehh--------H-hhccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHH---HHHHHH
Confidence            44   468996 4689999999865        2 2333222 2335677888888888888754333222   333333


Q ss_pred             HHHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc-ccC----CC-C---HHHHHHHHHHhcCeEeecCCCCCCCCe
Q 014769          323 AEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL-LED----IN-D---DIEFALKLAKEESVIVTPGIYVGLKNW  389 (419)
Q Consensus       323 ~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~-~~~----~~-~---~~~~~~~ll~~~gv~v~~g~~~~~~~~  389 (419)
                      .+++.+.|++    +|.+.  ....-|+++.+.+.... ...    .. +   ...+...+ .++||++.++..+  .+.
T Consensus       359 G~~l~~~L~~l~~~~~~i~--~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~g~~--~~~  433 (464)
T PRK06938        359 GERLREHLRQLQRDYPQLG--DVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQREC-LRRGLILELGGRH--GSV  433 (464)
T ss_pred             HHHHHHHHHHHHHhCCCee--eeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHH-HHCCeEEeecCCC--CCE
Confidence            4444444433    43222  12344666667663210 000    00 1   12344455 5689999875322  367


Q ss_pred             EEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          390 LRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       390 ~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +|+.+  ..++++++++++++.+++.+..
T Consensus       434 l~~~Ppl~it~~eid~~~~~l~~~l~~~~  462 (464)
T PRK06938        434 VRFLPPLIITAEQIDEVAEIFAEAVAAAV  462 (464)
T ss_pred             EEEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence            99986  5799999999999999998753

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.77  E-value=1.1e-15  Score=128.73  Aligned_cols=323  Identities=13%  Similarity=0.151  Sum_probs=204.9

Q ss_pred             ChHHHHHHHHHHHhCCCCCCCC--------CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC
Q 014769           60 TAVEAEDAIVDAVRSGKFNCYA--------TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG  131 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~~Y~--------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g  131 (419)
                      ++++.++++.+--+.-+.-.|.        ..+-+..+.+.+++|+        .-|.+-+|+|+.++=++++.+++++|
T Consensus        29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~g  100 (382)
T COG1103          29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKEG  100 (382)
T ss_pred             CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccCC
Confidence            5677777777653221111111        1123467778899998        45789999999999999999999999


Q ss_pred             CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-------CccEEEEeCCCCccccCCCHHHHHH
Q 014769          132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-------NTAAMVIINPGNPCGNVFTYHHLQE  204 (419)
Q Consensus       132 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~  204 (419)
                      |.|++...+|+...-+++..|+++..+|-.....+.+++|...+.+.+       .+.+.++++|...-|.+.+   -++
T Consensus       101 d~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akk  177 (382)
T COG1103         101 DWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKK  177 (382)
T ss_pred             CEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHH
Confidence            999999999988888899999999999865455678888877665532       2456688899877888776   899


Q ss_pred             HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh
Q 014769          205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD  284 (419)
Q Consensus       205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~  284 (419)
                      ++++|+++++.++...+|..    |.-+.+....+.+   ++++|-+|+ ..+.-++|.+..+.        +..+..-.
T Consensus       178 va~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKs-mAAs~PiGvl~~~e--------E~ae~V~r  241 (382)
T COG1103         178 VAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKS-MAASAPIGVLAMSE--------EWAEIVLR  241 (382)
T ss_pred             HHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccc-hhccCCeeEEeehh--------HHHHHHHh
Confidence            99999999999999999987    4445555555555   889999999 46777899998875        23332211


Q ss_pred             hh-------cc-ccCCchHHHHHHHHHHcc-cc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecC
Q 014769          285 CL-------SI-YSDIPTFIQGAIPQILEK-TK-EDFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLN  353 (419)
Q Consensus       285 ~~-------~~-~~~~~~~~~~a~~~~l~~-~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~  353 (419)
                      ..       .. ..+.+.-.. -+..++.+ .. .+.+.+.-+.+ +..+.+.+.|+++.|+... ..|..--.+.+..|
T Consensus       242 ~Sg~~~~~KEvellGCT~rGa-pivTlmASfP~V~eRVkrWdeEv-~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp  319 (382)
T COG1103         242 RSGRAFPKKEVELLGCTVRGA-PIVTLMASFPHVVERVKRWDEEV-EKARWFVAELEKIGGVKQLGERPKNHDLMKFETP  319 (382)
T ss_pred             hcccccccceeeeecccccCc-hHHHHHhcCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcccceeeecCc
Confidence            11       00 011111111 11112221 00 01111212222 3344556666666444321 12333223333333


Q ss_pred             ccc---ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHHHHHHHH
Q 014769          354 PWL---LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       354 ~~~---~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ...   .+......-+.+.| +++||.   |...+...++.+|+ +.+.|+++..++.++++++++
T Consensus       320 ~f~eIakk~~r~gyFlY~EL-K~RgI~---GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky  381 (382)
T COG1103         320 VFHEIAKKHKRKGYFLYEEL-KKRGIH---GIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY  381 (382)
T ss_pred             hHHHHHHhCcCCceeeHHHH-HhcCcc---ccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence            210   00001112234444 777875   33334578999998 899999999999999999876

>PRK04311 selenocysteine synthase; Provisional

Probab=99.77  E-value=3.3e-15  Score=142.53  Aligned_cols=320  Identities=17%  Similarity=0.128  Sum_probs=193.2

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCC---CC--CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATN---SG--IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA  132 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd  132 (419)
                      .+.++.+.+++.+.+.......|.-.   .|  +..+++.+++++        +.+..++++++++|+..++.++ .+||
T Consensus        96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gd  166 (464)
T PRK04311         96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGK  166 (464)
T ss_pred             CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCC
Confidence            45778999999888765321122211   11  257888888887        2346788888999999988765 6899


Q ss_pred             eEEeeCCCCCC------cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc--c--cCCCHHHH
Q 014769          133 NVLLPRPGWPY------YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC--G--NVFTYHHL  202 (419)
Q Consensus       133 ~vlv~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt--G--~~~~~~~l  202 (419)
                      +|++....+..      +...+...|++++.++...    ..++++++++++++++++++++++||+  |  ...+   +
T Consensus       167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~d---l  239 (464)
T PRK04311        167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVS---L  239 (464)
T ss_pred             EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCC---H
Confidence            99999865542      2345677899988876421    357889999999899999999999983  4  4566   9


Q ss_pred             HHHHHHHHhCCCeEEEcccccccc----cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          203 QEIAEMARKLRVMVVADEVYGHLT----FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       203 ~~i~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      ++|+++|+++|+++++|...+.+.    ++-...+.+......+-.++++|.+|.++.|  ..|++++++        ++
T Consensus       240 ~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~l  309 (464)
T PRK04311        240 AELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------EL  309 (464)
T ss_pred             HHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcH--------HH
Confidence            999999999999999999654331    1100111222211122348889999986555  489998865        56


Q ss_pred             HHHHHhhh-ccccCCchHHHHHHHHHHc----ccc-h------HHHHHHHHHHHHHHHHHHHHhhcCC--CC--CCC---
Q 014769          279 IDSIKDCL-SIYSDIPTFIQGAIPQILE----KTK-E------DFFCKLIDTLRESAEICYDGVKEIP--CI--SCP---  339 (419)
Q Consensus       279 ~~~l~~~~-~~~~~~~~~~~~a~~~~l~----~~~-~------~~~~~~~~~~~~~~~~l~~~l~~~~--~~--~~~---  339 (419)
                      ++.++... .......-....++.+.+.    ... .      .-+....+++.++.+.+.+.|+..+  ++  .++   
T Consensus       310 i~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~  389 (464)
T PRK04311        310 IARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSF  389 (464)
T ss_pred             HHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEcc
Confidence            66666321 0011112222222222222    100 0      1122233666677888888887643  22  111   


Q ss_pred             CCCCc---------eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHH
Q 014769          340 NKPEG---------SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMK  409 (419)
Q Consensus       340 ~~p~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~  409 (419)
                      ....|         ++-+.++.+     + .+..++...| ++....|..-   -.++.+.+.+ +..+++++..+++|.
T Consensus       390 ~~~gggs~p~~~~~~~~v~~~~~-----~-~~~~~l~~~l-r~~~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~  459 (464)
T PRK04311        390 SQVGGGSLPVDRLPSAAVTLTPK-----D-RSLEALAARL-RLLPPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALL  459 (464)
T ss_pred             CccCCCCCcCCCCCeEEEEEeCC-----C-CCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHH
Confidence            01111         222222211     1 1345555444 6644333221   1257788888 568899999999998


Q ss_pred             HHHH
Q 014769          410 AFCQ  413 (419)
Q Consensus       410 ~~~~  413 (419)
                      +++.
T Consensus       460 ~~~~  463 (464)
T PRK04311        460 EALN  463 (464)
T ss_pred             HHhh
Confidence            8764

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.77  E-value=1e-16  Score=147.99  Aligned_cols=355  Identities=14%  Similarity=0.103  Sum_probs=201.2

Q ss_pred             hhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHHHH
Q 014769           23 VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIADY   96 (419)
Q Consensus        23 ~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~   96 (419)
                      ..|.+++++-..+     ....|+|--..      -..+|.+++++...+.+....+      |+...-+.++++...+.
T Consensus         6 ~ei~~li~~e~~r-----q~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~r   74 (399)
T PF00464_consen    6 PEIYELIEKEEER-----QRSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIER   74 (399)
T ss_dssp             HHHHHHHHHHHHH-----HHHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----HhcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHH
Confidence            3455555543332     33456665543      2356777777766554432222      33333345666666666


Q ss_pred             HHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---HHH-------hhcCCEEEEEeccCCCC
Q 014769           97 LSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIA-------QRKQVEVRHFDLLPERN  165 (419)
Q Consensus        97 l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~~~-------~~~g~~~~~~~~~~~~~  165 (419)
                      .++.++...+.-.+ +=..+++.|+..++.+|++|||+|+..++.+.++.   ...       .....+...++++++ +
T Consensus        75 a~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~  153 (399)
T PF00464_consen   75 AKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-T  153 (399)
T ss_dssp             HHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-T
T ss_pred             HHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-C
Confidence            66655533221133 33577788999999999999999999987775542   111       223467888888765 4


Q ss_pred             cccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCc
Q 014769          166 WEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVP  243 (419)
Q Consensus       166 ~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~  243 (419)
                      ..+|.|++++.+.. +|++|++-.-..|  ..++   ++++.++|++.|.++++|.+|... +-+|..+.|+ .. .+  
T Consensus       154 ~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~-~~-AD--  224 (399)
T PF00464_consen  154 GLIDYDELEKLAKEHKPKLIICGASSYP--RPID---FKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF-PY-AD--  224 (399)
T ss_dssp             SSB-HHHHHHHHHHH--SEEEEE-SSTS--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC-CT-SS--
T ss_pred             CeECHHHHHHHHhhcCCCEEEECchhcc--CccC---HHHHHHHHHhcCcEEEecccccccceehheecCcc-cc-ce--
Confidence            68999999988765 5666665433332  2233   789999999999999999999754 3344333344 23 22  


Q ss_pred             EEEEecCCCcCCCCCceeEEEEeeCC------CCccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHH
Q 014769          244 VITLGSISKRWLVPGWRFGWLVTNDP------NGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKL  315 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G~r~G~~~~~~~------~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~  315 (419)
                       ++.+|++|+  ++|.|.|.++++..      .....++++.+++......  .+++......+.+..+.+.....+++.
T Consensus       225 -vvt~sThKt--l~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Y  301 (399)
T PF00464_consen  225 -VVTGSTHKT--LRGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEY  301 (399)
T ss_dssp             -EEEEESSGG--G-SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHH
T ss_pred             -EEEeecccc--ccccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHH
Confidence             888899998  68999999999710      0000023688888876422  233333334444445554334556788


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----CCCeE
Q 014769          316 IDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----LKNWL  390 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~~  390 (419)
                      .+++.++.+.|.+.|.+. |+.++........+|+++.....    + ...+++.|++.||.+..-..++     ....+
T Consensus       302 a~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~----~-g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGl  375 (399)
T PF00464_consen  302 AKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGI----D-GKEAEKALEEAGIIVNKNTIPGDRSPFVPSGL  375 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS------HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEE
T ss_pred             HHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEeccccc----c-hHHHHHHHHhcCeeecccccCCCCCCCCCCEE
Confidence            889999999999999987 88755444556778888864321    3 3345667799999986432221     24689


Q ss_pred             EEEee------cCHHHHHHHHHH
Q 014769          391 RIAFC------AEPSALKDGLGR  407 (419)
Q Consensus       391 Ris~~------~~~~~l~~~l~~  407 (419)
                      ||+..      ..++++++..+.
T Consensus       376 RlGT~~lT~rG~~e~dm~~iA~~  398 (399)
T PF00464_consen  376 RLGTPALTRRGMKEEDMKEIAEL  398 (399)
T ss_dssp             EEESHHHHHTT--HHHHHHHHHH
T ss_pred             EECCHHHHhCCCCHHHHHHHHhh
Confidence            99982      356777766554

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.77  E-value=5.3e-16  Score=136.62  Aligned_cols=293  Identities=18%  Similarity=0.165  Sum_probs=192.8

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~  159 (419)
                      +....|++.|+..=   .|     -.-+-++++++|+..++..++++||.|+..+--|.+.    ...++..|++++++.
T Consensus        62 PT~~vlE~RiAaLE---GG-----~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd  133 (426)
T COG2873          62 PTTDVLEERIAALE---GG-----VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD  133 (426)
T ss_pred             chHHHHHHHHHHhh---cc-----hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence            35678999999864   11     2346678889999999999999999999998878764    455688899999875


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      .       .|++.+++++++++|+|++.+-.||.+.+++   +++|.++|+++++++|+|..+..-.    -..|+ ..+
T Consensus       134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpy----l~rP~-~hG  198 (426)
T COG2873         134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPY----LCRPI-EHG  198 (426)
T ss_pred             C-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcce----ecchh-hcC
Confidence            3       3789999999999999999999999999999   9999999999999999999887521    11122 223


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc----hh---------------------hHHHHHHh--hhccccCC
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ----KS---------------------GIIDSIKD--CLSIYSDI  292 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~---------------------~~~~~l~~--~~~~~~~~  292 (419)
                      .   .|++.|++|..+..|.-+|-+++..-...+.    .|                     .++-+.+.  .+.+..+.
T Consensus       199 A---DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l  275 (426)
T COG2873         199 A---DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL  275 (426)
T ss_pred             C---CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence            3   3899999999999999998888754221111    00                     01111111  11222233


Q ss_pred             chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------------ceEEEEeecCcc
Q 014769          293 PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE-----------------GSMVTMVKLNPW  355 (419)
Q Consensus       293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-----------------~g~~~~~~~~~~  355 (419)
                      ++.....+..-+     +-+.-+.++..++...+.+.|+.+|.+..|..|.                 .|-.+.+.+...
T Consensus       276 sPfnAfl~lqGl-----ETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg  350 (426)
T COG2873         276 SPFNAFLLLQGL-----ETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG  350 (426)
T ss_pred             CcHHHHHHHhch-----hhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecCh
Confidence            333333322222     2244556777788889999999887665444332                 233455555432


Q ss_pred             cccCCCCHHHHHHHHHHh----------cCeEeecCCCCCC-------------CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKE----------ESVIVTPGIYVGL-------------KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~----------~gv~v~~g~~~~~-------------~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      .    .....|++.| +-          +-+.+.|.+.-..             ++.+|+|++.  |+++..+..|++++
T Consensus       351 ~----ea~~~fi~~l-~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl  423 (426)
T COG2873         351 Y----EAGKKFIDAL-KLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQAL  423 (426)
T ss_pred             H----HHHHHHHHHH-HHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHH
Confidence            1    1123444443 21          2334445443221             5789999997  46677777777776


Q ss_pred             HH
Q 014769          413 QR  414 (419)
Q Consensus       413 ~~  414 (419)
                      ++
T Consensus       424 ~~  425 (426)
T COG2873         424 EA  425 (426)
T ss_pred             hc
Confidence            53

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.76  E-value=1.7e-15  Score=129.94  Aligned_cols=323  Identities=15%  Similarity=0.117  Sum_probs=218.2

Q ss_pred             ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCC
Q 014769           60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP  139 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p  139 (419)
                      .++.+.+++..    +.. +|..++ ...+.+.+.+-++..+. ..++.-.++..+++.+++.++..++.|||.|++..-
T Consensus        28 l~~~V~~A~~~----~~l-gh~sPe-~~qIm~~v~egikyVFk-T~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~  100 (385)
T KOG2862|consen   28 LSGRVQEAMSR----PSL-GHMSPE-FVQIMDEVLEGIKYVFK-TANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVST  100 (385)
T ss_pred             CCHHHHHhhcC----Ccc-ccCCHH-HHHHHHHHHHHHHHHhc-cCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEe
Confidence            45666666543    323 444422 23333333333322222 234456788888999999999999999999998865


Q ss_pred             CCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeE
Q 014769          140 GWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMV  216 (419)
Q Consensus       140 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l  216 (419)
                      +-.+  ..+.++.+|+++..++.+  .+...+++.+...+.+ +++++++++....||+..+.  +..+.++|++|+.++
T Consensus       101 G~wg~ra~D~~~r~ga~V~~v~~~--~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~ll  176 (385)
T KOG2862|consen  101 GTWGQRAADCARRYGAEVDVVEAD--IGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL--LAISGELCHKHEALL  176 (385)
T ss_pred             chHHHHHHHHHHhhCceeeEEecC--cccCccHHHHHHHHHhcCCceEEEEecCccccccchH--HHHHHHHhhcCCeEE
Confidence            5443  457889999999998764  3557899999988876 57888999999999998772  345667899999999


Q ss_pred             EEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh----------
Q 014769          217 VADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL----------  286 (419)
Q Consensus       217 i~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~----------  286 (419)
                      ++|.+-+-   ++.++ .+..++.+   +......|+++.| ..++.+..++        .-.+++++..          
T Consensus       177 lVD~VaSl---ggt~F-~mDewgVD---vaytgSQKaL~aP-~GLsiisfS~--------ka~~~~~~rK~~~~~~yFd~  240 (385)
T KOG2862|consen  177 LVDTVASL---GGTEF-EMDEWGVD---VAYTGSQKALGAP-AGLSIISFSD--------KALEAIRDRKTKPVSFYFDI  240 (385)
T ss_pred             EEechhhc---CCccc-eehhhccc---EEEecchhhcCCC-CCcceeecCH--------HHHHHHhhccCCceEEEEeH
Confidence            99999885   23332 23334333   5555667997664 2244454433        1223333211          


Q ss_pred             --------------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CC--CceEEEE
Q 014769          287 --------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN-KP--EGSMVTM  349 (419)
Q Consensus       287 --------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p--~~g~~~~  349 (419)
                                    .+..+++....+.+.++|....++.+++..++.++..+.++..|+++ |++... .+  .......
T Consensus       241 ~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvtt  319 (385)
T KOG2862|consen  241 LRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTT  319 (385)
T ss_pred             HhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCccee
Confidence                          12235566667788888887778899999999999999999999987 554211 11  1112233


Q ss_pred             eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHH
Q 014769          350 VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +..|..     .|..+++.++...+++.+.-|........+||.+ +  .+.|.++..++.|+.++.+.
T Consensus       320 v~vp~g-----vDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~  383 (385)
T KOG2862|consen  320 VKVPYG-----VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK  383 (385)
T ss_pred             eecCCC-----CCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence            444532     3678888888887788887666666688999998 4  36799999999999888753

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.76  E-value=6.4e-16  Score=136.76  Aligned_cols=349  Identities=15%  Similarity=0.074  Sum_probs=219.0

Q ss_pred             HhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEE
Q 014769           34 DSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVY  111 (419)
Q Consensus        34 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~  111 (419)
                      +-+....|+.+.|+-.|..+.- .-.-+|.+.+++.+++..-  ....|..++ ..++.+++++.+      +-+-..++
T Consensus        42 ~ylyDe~G~ryLD~f~Gi~tvs-lGHchP~v~~a~~kQl~~l~H~t~~~~~~p-i~~~Ae~L~s~~------P~~l~~vf  113 (442)
T KOG1404|consen   42 QYLYDEEGRRYLDAFGGIVTVS-LGHCHPDVVAAAVKQLKKLYHTTSGYLNPP-IHDLAEALVSKL------PGDLKVVF  113 (442)
T ss_pred             EEEEcCCCceeehhhCCeEEEE-cCCCChHHHHHHHHhhhhhEEeeccccCCc-HHHHHHHHHHhC------CCCceEEE
Confidence            3344556889999998854432 2246899999999988542  344666543 467888888877      44556799


Q ss_pred             EcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-CCEEEEEecc-----------CC--C-CcccC-----
Q 014769          112 VTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-QVEVRHFDLL-----------PE--R-NWEVD-----  169 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~~~~~~~~~-----------~~--~-~~~~~-----  169 (419)
                      ++++++||++++++....  .--.|+....+|++.......+ +......+.+           |+  . -|+=+     
T Consensus       114 F~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~  193 (442)
T KOG1404|consen  114 FVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEA  193 (442)
T ss_pred             EecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhh
Confidence            999999999999887643  2246777788887754433322 2222111110           00  0 00000     


Q ss_pred             ----hHHHHHhh---cCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          170 ----LDAVEALA---DKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       170 ----~~~l~~~~---~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                          .+++++.+   .+.+.+.++..+ +.-.|+ .+++.++++..++|+++|.++|.||++++|...| ....+...+.
T Consensus       194 ~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v  272 (442)
T KOG1404|consen  194 SDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGV  272 (442)
T ss_pred             HHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCC
Confidence                12233333   234556667666 454565 4789999999999999999999999999988777 4444444333


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-c-cccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-S-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                         +--+-|++|. ...|+++|.+++..        ++.+-+.+.. . .+++.++++..+..++|+-..++.++++...
T Consensus       273 ---~PDIvTmAKg-iGnG~Pl~AVvtt~--------EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~  340 (442)
T KOG1404|consen  273 ---VPDIVTMAKG-IGNGFPLGAVVTTP--------EIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAE  340 (442)
T ss_pred             ---CccHHHHHhh-ccCCCcceeeecCH--------HHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHH
Confidence               2334489999 56789999999875        6888777664 2 2567788887777777776545555554443


Q ss_pred             HHHHHHHHHHHhhcC-CCCCCCC-CCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEE
Q 014769          319 LRESAEICYDGVKEI-PCISCPN-KPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIA  393 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~-~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris  393 (419)
                         ...++.+.|.++ .+...+. ...-|.++-+.+-....+..+.   -..++.+-.+++|++|.-|..++.  .+||+
T Consensus       341 ---vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~--vfria  415 (442)
T KOG1404|consen  341 ---VGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN--VFRIA  415 (442)
T ss_pred             ---HHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccce--EEEec
Confidence               444455555442 1112111 2344777766663322111111   123334444889999977776654  99999


Q ss_pred             e--ecCHHHHHHHHHHH
Q 014769          394 F--CAEPSALKDGLGRM  408 (419)
Q Consensus       394 ~--~~~~~~l~~~l~~l  408 (419)
                      +  +.+.+|++.+++..
T Consensus       416 PPlciT~edi~f~~~~~  432 (442)
T KOG1404|consen  416 PPLCITKEDIDFAVEYF  432 (442)
T ss_pred             CCeeccHHHHHHHHHHH
Confidence            8  67999997776655

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.75  E-value=3.6e-15  Score=142.89  Aligned_cols=345  Identities=16%  Similarity=0.151  Sum_probs=193.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHH--HHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAED--AIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~--a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      +|+.++||..|.-... .-..+|.+.+  ++.+++..-.+.......-..+....+++.+.+..+ +...+.|+++++++
T Consensus        43 dG~~ylD~~~g~~~~~-lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGs  120 (443)
T PRK08297         43 TGRRYLDMFTFFASSA-LGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGA  120 (443)
T ss_pred             CCCEeeecccCHhhhc-CCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchH
Confidence            5888999988743321 1235788888  888888642210000000112233334444433221 12346999999999


Q ss_pred             HHHHHHHHHhcC--------CC------CeEEeeCCCCCCcHHHHhhcCC-EEE---EEecc-------CCC-----Ccc
Q 014769          118 QAVEVILSVLAR--------PG------ANVLLPRPGWPYYEGIAQRKQV-EVR---HFDLL-------PER-----NWE  167 (419)
Q Consensus       118 ~al~~~~~~l~~--------~g------d~vlv~~p~~~~~~~~~~~~g~-~~~---~~~~~-------~~~-----~~~  167 (419)
                      +|++.+++....        .|      .+|+....+|++....+..... ...   ..+..       +..     ...
T Consensus       121 EAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (443)
T PRK08297        121 LAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGED  200 (443)
T ss_pred             HHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccc
Confidence            999999988731        12      5799999999987544433321 100   00100       000     000


Q ss_pred             ---c------ChHHHHHhhcC--CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769          168 ---V------DLDAVEALADK--NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP  234 (419)
Q Consensus       168 ---~------~~~~l~~~~~~--~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  234 (419)
                         .      +++.+++.+..  +..+.+|+.| ....|. ..|.++++++.++|++||+++|.||++.++...|..+ .
T Consensus       201 ~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a  279 (443)
T PRK08297        201 LEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW-A  279 (443)
T ss_pred             cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH-H
Confidence               0      23344455532  3345566666 444454 5899999999999999999999999999876555322 1


Q ss_pred             ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH-HHH--hhhccccCCchHHHHHHHHHHcccchHH
Q 014769          235 MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID-SIK--DCLSIYSDIPTFIQGAIPQILEKTKEDF  311 (419)
Q Consensus       235 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~l~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~  311 (419)
                      ...++..+.++   +++|.+.     +|.+++.+.  +.   +... .+.  .....+++.++++..++.+.|+...++ 
T Consensus       280 ~~~~gv~PDiv---~~gK~l~-----~~a~l~~~~--i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~-  345 (443)
T PRK08297        280 YQQLGVRPDIV---AFGKKTQ-----VCGIMAGRR--VD---EVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEED-  345 (443)
T ss_pred             HHhcCCCCCEE---Eeccccc-----ccceecchH--HH---HhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhc-
Confidence            12222222334   5789842     233333321  00   1111 111  112235567888888877777643222 


Q ss_pred             HHHHHHHHHHHHHHHHHHhh----cCCCCC-CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          312 FCKLIDTLRESAEICYDGVK----EIPCIS-CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~----~~~~~~-~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                        ...+++++..+++.+.|+    +.|.+. .+ . ..|.++.+.++..     .....+...++ ++||++.|+.    
T Consensus       346 --~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~v-r-g~G~~~~i~~~~~-----~~~~~~~~~l~-~~Gvl~~~~~----  411 (443)
T PRK08297        346 --GLVENAARQGEYLLARLEELAAEFPAVVSNV-R-GRGLMCAFDLPTT-----ADRDEVIRRLW-EEGVLVLPCG----  411 (443)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHHHCCCcceee-e-ccceEEEEEecCH-----HHHHHHHHHHH-HCCEEEecCC----
Confidence              222333444444444443    343331 12 2 3466777777531     11345666664 6899998753    


Q ss_pred             CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          387 KNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ...+|+++  ..+++++++++++|.++++++
T Consensus       412 ~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        412 ERSIRFRPALTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            35688876  578999999999999999865

>PLN02452 phosphoserine transaminase

Probab=99.75  E-value=1.6e-15  Score=140.92  Aligned_cols=328  Identities=14%  Similarity=0.104  Sum_probs=215.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV  112 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~  112 (419)
                      ...+++|+.| |     ..+++.|++++...+-+..        ....++  -..++-+.+.+.+++.++++-+.+-+++
T Consensus         5 ~~~~~~f~pG-P-----~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l   76 (365)
T PLN02452          5 QGRVFNFSAG-P-----ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFL   76 (365)
T ss_pred             CCceEeeeCC-C-----CCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            3446889888 3     3568899999887653211        112222  2345555555555555554333345677


Q ss_pred             cccHHHHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCC--cccChHHHHHhhcCCccEEEEeC
Q 014769          113 TLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERN--WEVDLDAVEALADKNTAAMVIIN  188 (419)
Q Consensus       113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~  188 (419)
                      ..|+|.+++.+...+..+|+++++...+.++  +...++.+|...+.... +..+  ..+++++++  ..++...|.+++
T Consensus        77 ~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~v~~~h  153 (365)
T PLN02452         77 QGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWE--LTPDAKFVHICA  153 (365)
T ss_pred             eCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcC--CCCCCcEEEECC
Confidence            7999999999999999999999888777665  34566777764333321 1122  135666542  234567888888


Q ss_pred             CCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      ....||+. .+   ++++.      ++++|+|.+.+...    .+..+..++     +...|..|.+|.+|  +|.++++
T Consensus       154 nETstGv~~~~---~~~i~------~~~lvVDa~Ss~g~----~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr  213 (365)
T PLN02452        154 NETIHGVEFKD---YPDVG------NVPLVADMSSNFLS----KPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIR  213 (365)
T ss_pred             CCCCCcEecCc---ccccC------CCeEEEECCccccC----cccCHHHcC-----EEEEecccccCCCC--eEEEEEc
Confidence            88899996 44   44443      37999999998632    333343333     23358999998788  7888886


Q ss_pred             CCCCccchhhHHHHHHh-------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcC
Q 014769          268 DPNGIFQKSGIIDSIKD-------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      ++        +++++..             ..+..++++....+++.++|+....+ .++.+.++.+++.+.+++.|++.
T Consensus       214 ~~--------~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~  285 (365)
T PLN02452        214 KD--------LIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDES  285 (365)
T ss_pred             HH--------HHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC
Confidence            52        2222111             11233678888888888888875544 68899999999999999999987


Q ss_pred             CCCC-CCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769          334 PCIS-CPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM  408 (419)
Q Consensus       334 ~~~~-~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l  408 (419)
                      +|+. ....+  ...+.+.+.++..     ....+|...+ +++|+...+|..--  +.+|+|+  +.+.++++.+++.+
T Consensus       286 ~G~y~~~~~~~~rs~~~vsF~~~~~-----~~~~~f~~~~-~~~g~~~~~G~r~~--gg~R~s~yna~~~~~v~~L~~~m  357 (365)
T PLN02452        286 NGFYVCPVEKSVRSLMNVPFTLGGS-----ELEAEFVKEA-AKAGMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFM  357 (365)
T ss_pred             CCcccCCCChHHhCCeEEEEEcCCc-----hhHHHHHHHH-HHCCCcccCCcccc--CceEEECcCCCCHHHHHHHHHHH
Confidence            6762 11122  2445566666542     2355666555 88899999987542  2399999  57899999999988


Q ss_pred             HHHHHHH
Q 014769          409 KAFCQRH  415 (419)
Q Consensus       409 ~~~~~~~  415 (419)
                      +++-+++
T Consensus       358 ~~f~~~~  364 (365)
T PLN02452        358 KDFQAKH  364 (365)
T ss_pred             HHHHHhc
Confidence            8887654

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.75  E-value=4.6e-15  Score=142.69  Aligned_cols=355  Identities=16%  Similarity=0.100  Sum_probs=205.9

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGC  116 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~  116 (419)
                      ..+|+.+|||..|.-... .-.-+|.+.+++.+++.......+.  .-..+.+..+++.+.+..+..... ..+++++++
T Consensus        54 D~dG~~ylD~~~g~~~~~-lGH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SG  130 (459)
T PRK06931         54 DVEGNQYLDCLAGAGTLA-LGHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSG  130 (459)
T ss_pred             eCCCCEEEEcccchhhcc-CCCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCc
Confidence            446889999988853321 1236789999999998753211111  112355556666665533211111 234667899


Q ss_pred             HHHHHHHHHHhcC-C-CCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCC--Ccc----cChHHH--
Q 014769          117 KQAVEVILSVLAR-P-GANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPER--NWE----VDLDAV--  173 (419)
Q Consensus       117 ~~al~~~~~~l~~-~-gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~----~~~~~l--  173 (419)
                      ++|++.+++.... . ..+|+....+|++....+.....             .+..++.....  .+.    -+.+.+  
T Consensus       131 sEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (459)
T PRK06931        131 ADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTY  210 (459)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence            9999999987642 2 36799999999987655443211             11222211000  000    012222  


Q ss_pred             --HHhhc-----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769          174 --EALAD-----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV  244 (419)
Q Consensus       174 --~~~~~-----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  244 (419)
                        ++.+.     .+..+.+|+.| +.-.|. ..|.++++++.++|+++|+++|.||++.++...|..+ ....++..+.+
T Consensus       211 ~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~-a~~~~gv~PDi  289 (459)
T PRK06931        211 YFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMF-AFEHAGIEPDI  289 (459)
T ss_pred             HHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHH-HhhhcCCCCCE
Confidence              23332     12345566677 444465 5689999999999999999999999999886555422 22233333334


Q ss_pred             EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA  323 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  323 (419)
                      +   +++|.+ ..|+++|.+++++        + ++.+... ...+++.++++..++.+.|+....+.   ..++.++..
T Consensus       290 v---t~gK~l-~gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~---l~~~~~~~G  353 (459)
T PRK06931        290 I---VMSKAV-GGGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEEN---LAQNAAERG  353 (459)
T ss_pred             E---Eecccc-cCCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHH
Confidence            4   568995 5689999887754        2 2333222 23356778888888888876533222   223333333


Q ss_pred             HHHHHHhh----cCCCCCCCCCCCceEEEEeecCccc-cc----CCC-C---HHHHHHHHHHhcCeEeecCCCCCCCCeE
Q 014769          324 EICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWL-LE----DIN-D---DIEFALKLAKEESVIVTPGIYVGLKNWL  390 (419)
Q Consensus       324 ~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~-~~----~~~-~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~  390 (419)
                      +++.+.|+    +.|.+..  ...-|.++.+.+.... ..    ... +   ...+...+ .++||++.++...  .+.+
T Consensus       354 ~~l~~~L~~l~~~~~~i~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~~~--~~~l  428 (459)
T PRK06931        354 EWLKAQLAELQKRYPCIGN--VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKAC-FENGLLLERGGRN--GNVV  428 (459)
T ss_pred             HHHHHHHHHHHHhCCCeEe--EecCceEEEEEEccCcccccccccCCccHHHHHHHHHHH-HHCCcEEeecCCC--CCEE
Confidence            44444443    3442221  2334666666663210 00    000 1   12344444 5689999775322  4678


Q ss_pred             EEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          391 RIAF--CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       391 Ris~--~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      |+.+  ..++++++++++++.+++.+..|
T Consensus       429 ~~~Ppl~it~~eid~~~~~l~~~l~~~~~  457 (459)
T PRK06931        429 RLLPPLLITQAECEEFIDRFEQALLAAVK  457 (459)
T ss_pred             EEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence            8887  47999999999999999987654

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.75  E-value=8.2e-16  Score=130.82  Aligned_cols=327  Identities=13%  Similarity=0.097  Sum_probs=205.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV  112 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~  112 (419)
                      ..++++|+-++   +..+..+|++.++-..++.....        -+|.+  -...|+.+||+|.        ..++.++
T Consensus        66 ~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh--------~rED~il  132 (417)
T KOG1359|consen   66 DKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFH--------GREDTIL  132 (417)
T ss_pred             ccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHh--------CCCceEE
Confidence            45688888887   34567889999998888864211        11222  2357788888886        3478889


Q ss_pred             cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCC
Q 014769          113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINP  189 (419)
Q Consensus       113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p  189 (419)
                      .+++-.|+..++.+++.|.|.|+.....|-++.+......    .+.       .+|+-.++..+.+   ....++++..
T Consensus       133 ypscfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry~-------h~dv~~l~~~l~~a~k~r~klv~TDg  201 (417)
T KOG1359|consen  133 YPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYR-------HVDVFDLEHCLISACKMRLKLVVTDG  201 (417)
T ss_pred             eccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hhc-------cchhHHHHHHHHHhhhheEEEEEecc
Confidence            9999999999999999999999998888877655544332    111       2344445443322   1223344433


Q ss_pred             -CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          190 -GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       190 -~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                       -...|-+.|   +++|.+++++||.++++||+|+.+.++..+...-..++. .+..+..++++|++|  |---||..++
T Consensus       202 ~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp  276 (417)
T KOG1359|consen  202 VFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGP  276 (417)
T ss_pred             eeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCC
Confidence             467888889   889999999999999999999988776544332222332 123578889999966  2334999997


Q ss_pred             CCCCccchhhHHHHHHhhh-cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCL-SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      .        ++++.++... .+  +.+.++...-.+.++++-.  -.-.+...+.+.+.+++++..+.- |++ +.....
T Consensus       277 ~--------~li~llrqr~RpylFSnslppavV~~a~ka~dll--m~s~~~i~~~~a~~qrfr~~me~a-Gft-Isg~~h  344 (417)
T KOG1359|consen  277 K--------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLL--MVSSKEIQSRQANTQRFREFMEAA-GFT-ISGASH  344 (417)
T ss_pred             h--------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhc-Cce-ecCCCC
Confidence            7        5777777653 22  1222211111222222211  112233455667777777776654 776 322111


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      . ..-+-+.+.     ..+..+.++||+ .||+|..-+++..   ...+|+.+  ..++|+|+++++.+.++.+.+
T Consensus       345 P-I~pv~lGda-----~lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~  413 (417)
T KOG1359|consen  345 P-ICPVMLGDA-----RLASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL  413 (417)
T ss_pred             C-ccceecccH-----HHHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence            1 222223221     235677788876 5999976555544   24577777  369999999999999887654

>PLN02263 serine decarboxylase

Probab=99.73  E-value=9e-14  Score=131.08  Aligned_cols=299  Identities=14%  Similarity=-0.011  Sum_probs=200.0

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP  162 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~  162 (419)
                      +..++++.+.+|+.+.+|.+.+...-++|+|||+++..++.+.++  +...+++++-+|+++...+..+|++++.++.+ 
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d-  208 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL-  208 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence            567999999999999888643222358899999999998888765  33578888999999999999999999998875 


Q ss_pred             CCCcccChHHHHHhhcCCc---cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC-----eEEEcccccccccCC-CCCC
Q 014769          163 ERNWEVDLDAVEALADKNT---AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV-----MVVADEVYGHLTFGS-IPYT  233 (419)
Q Consensus       163 ~~~~~~~~~~l~~~~~~~~---~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~-~~~~  233 (419)
                       .++.+|+++|++++.+++   ..|+.+-++.++|.+=|   +++|.++|+++|+     |+++|.+|+++...- ...+
T Consensus       209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~  284 (470)
T PLN02263        209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP  284 (470)
T ss_pred             -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence             456899999999886543   34455667889999877   8999999999986     999999998865411 1111


Q ss_pred             CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC--ccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchH
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG--IFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .+. +...-.-| ..+.+|. +...+.+|.++++++..  +..+   .+.+.... ...++-+......+-..|.....+
T Consensus       285 ~~d-f~~~vDSI-svD~HK~-l~~P~~cgvll~R~~~~~~~~~~---~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~  358 (470)
T PLN02263        285 KVT-FKKPIGSV-SVSGHKF-VGCPMPCGVQITRMEHINVLSSN---VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYR  358 (470)
T ss_pred             ccC-CCcCccEE-EECCccc-cCCCcCEEEEEEehhhHhhhccC---hHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHH
Confidence            111 11111123 3379998 67778899999985210  0000   11111111 111121211122233334444457


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeE
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWL  390 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~  390 (419)
                      .+.+..++..++.+++.+.|++. ++..+..|.....+ ++-+        .+..      ..+|..+.+-     .+.+
T Consensus       359 G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~-f~~p--------~~~~------~~~gW~L~~~-----~~~~  417 (470)
T PLN02263        359 GFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVV-FERP--------KDEE------FVRRWQLACQ-----GNIA  417 (470)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEE-EecC--------chHH------hhcceEEccC-----CCcE
Confidence            88888999999999999999988 66656566655444 3332        1111      1246666542     3568


Q ss_pred             EEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          391 RIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       391 Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ++++.  .+.+.++++++.|++..+..
T Consensus       418 Hivvmphv~~~~id~fi~DL~~~~~~~  444 (470)
T PLN02263        418 HVVVMPSVTIEKLDYFLKELVEKRSTW  444 (470)
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence            88883  47899999999999887643

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.73  E-value=1.1e-14  Score=139.42  Aligned_cols=344  Identities=15%  Similarity=0.102  Sum_probs=189.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHH--HHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAE--DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~--~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      +|+.+|||..|..... .-..+|.+.  +++.+++............-.......+++.+.+..+ +...+.++++++++
T Consensus        36 dG~~ylD~~~g~~~~~-lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~f~~sGs  113 (431)
T TIGR03251        36 DGRRYLDMFSFFASMA-LGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLG-DPALPHLFFIEGGA  113 (431)
T ss_pred             CCCChhhcccChhhcC-CCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcC-CCCcCEEEEeCCcH
Confidence            6899999988844322 123578888  8888887653211111101112223334443333211 11346899999999


Q ss_pred             HHHHHHHHHhcC--------C------CCeEEeeCCCCCCcHHHHhhc-CCE-EE--EEec-------cC-------CCC
Q 014769          118 QAVEVILSVLAR--------P------GANVLLPRPGWPYYEGIAQRK-QVE-VR--HFDL-------LP-------ERN  165 (419)
Q Consensus       118 ~al~~~~~~l~~--------~------gd~vlv~~p~~~~~~~~~~~~-g~~-~~--~~~~-------~~-------~~~  165 (419)
                      +|++.+++....        .      +.+|+....+|++....+... |.. ..  ..+.       .+       ...
T Consensus       114 EAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  193 (431)
T TIGR03251       114 LAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPN  193 (431)
T ss_pred             HHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccc
Confidence            999999987631        1      367999999999865443322 211 00  0110       00       000


Q ss_pred             cc-------cChHHHHHhhc--CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769          166 WE-------VDLDAVEALAD--KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP  234 (419)
Q Consensus       166 ~~-------~~~~~l~~~~~--~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  234 (419)
                      ..       -+++.++..+.  .+..+.+++.| +...|. ..+++++++|.++|++||+++|+||++.++...|..+ .
T Consensus       194 ~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-a  272 (431)
T TIGR03251       194 LDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW-A  272 (431)
T ss_pred             cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH-H
Confidence            00       12333444443  23344455555 555665 4789999999999999999999999999876655322 1


Q ss_pred             ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH-HH--hhhccccCCchHHHHHHHHHHcccchH-
Q 014769          235 MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS-IK--DCLSIYSDIPTFIQGAIPQILEKTKED-  310 (419)
Q Consensus       235 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-l~--~~~~~~~~~~~~~~~a~~~~l~~~~~~-  310 (419)
                      ...++..+.++   +++|.+  +.  .|++....   +.   ++... +.  .....+++.++++..++.+.|+....+ 
T Consensus       273 ~~~~gv~PDi~---~~gK~~--~~--~g~~~~~~---i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~  339 (431)
T TIGR03251       273 YQQLGVQPDIV---AFGKKT--QV--CGIMAGRR---VD---EVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEER  339 (431)
T ss_pred             HHhcCCCCCEE---EecccC--cc--ceEEecch---HH---HhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            22223222333   468984  22  35554321   00   11111 11  012234566777777777777653222 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeE
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWL  390 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~  390 (419)
                      .+++..+.-+..++.+.+...+.+++... ....|.++.+.++..     .....+...+ .++||++.|..    ...+
T Consensus       340 l~~~~~~~g~~l~~~L~~l~~~~~~~i~~-vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gvl~~~~g----~~~l  408 (431)
T TIGR03251       340 LVDNARVQGAHLLARLHELAAEFPHLVSN-PRGRGLMCAFDLPST-----ADRDEVIRQL-YREGVLLLGCG----ERSI  408 (431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCccceec-ccccceeEEEEeCCH-----HHHHHHHHHH-HhCCeEEecCC----CCeE
Confidence            22333333333344444333334423211 223366667777531     1123566566 56899997753    3568


Q ss_pred             EEEe--ecCHHHHHHHHHHHHH
Q 014769          391 RIAF--CAEPSALKDGLGRMKA  410 (419)
Q Consensus       391 Ris~--~~~~~~l~~~l~~l~~  410 (419)
                      |+++  ..++++|+++++.|.+
T Consensus       409 r~~P~l~~t~~eid~~l~~l~~  430 (431)
T TIGR03251       409 RFRPPLTVTREEIDAAIDAIRR  430 (431)
T ss_pred             EEECCccCCHHHHHHHHHHHHh
Confidence            9887  4689999999999875

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.72  E-value=2.3e-14  Score=147.11  Aligned_cols=309  Identities=16%  Similarity=0.093  Sum_probs=196.0

Q ss_pred             CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc-cHHHHHHHHHHHhc----CCCC----eEEeeCCCCCCcHHHHhhcCC
Q 014769           83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTL-GCKQAVEVILSVLA----RPGA----NVLLPRPGWPYYEGIAQRKQV  153 (419)
Q Consensus        83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~-g~~~al~~~~~~l~----~~gd----~vlv~~p~~~~~~~~~~~~g~  153 (419)
                      .+|+.++...+.+++.+..|.    +++.+.. |++.+....+.++.    .+|+    +|++++..|......+...|+
T Consensus       537 ~qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~  612 (954)
T PRK05367        537 AAGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGM  612 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCC
Confidence            356778888888888876664    3565554 55555544443333    4555    599999999888888899999


Q ss_pred             EEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC
Q 014769          154 EVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI  230 (419)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~  230 (419)
                      +++.++++.  +..+|+++|++++++   ++.+|++++|++-++...+   +++|+++|+++|+++++|.++......  
T Consensus       613 ~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~--  685 (954)
T PRK05367        613 KVVVVACDE--NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVG--  685 (954)
T ss_pred             EEEEECCCC--CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccC--
Confidence            999998763  347999999998865   3566778888876444466   999999999999999999999743221  


Q ss_pred             CCCCccccCCCCcEEEEecCCCcCCC----CCceeEEEEeeCCCCccchhhHHHHHHhhh-------ccccCC--chH--
Q 014769          231 PYTPMGLFGSIVPVITLGSISKRWLV----PGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-------SIYSDI--PTF--  295 (419)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~--~~~--  295 (419)
                       ......++.+   ++..+++|+|+.    .|..+|++.++..        +...+....       ...+..  +..  
T Consensus       686 -l~~pg~~GAD---i~~~s~HK~f~~P~G~GGPg~G~l~vr~~--------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~  753 (954)
T PRK05367        686 -LARPGDIGAD---VSHLNLHKTFCIPHGGGGPGVGPIGVKAH--------LAPFLPGHPVQIAGGETGIGAVSAAPFGS  753 (954)
T ss_pred             -CCChhhcCCC---EEEecCcccCCCCcCCCCCceEEEeeccc--------ccccCCCCccCcCCCCCCcCcchhHHHHH
Confidence             1111234443   778899999753    3556899888641        222211110       000111  111  


Q ss_pred             --HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEeecCcccccCCCCHHHHHHHHH
Q 014769          296 --IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG--SMVTMVKLNPWLLEDINDDIEFALKLA  371 (419)
Q Consensus       296 --~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~~~~~~~~~~~~~~~~~~~ll  371 (419)
                        ....+..++.....+.+.+..++...+.+++.+.|++...+. +..|.+  ..-+.+++.........+..++.++| 
T Consensus       754 al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~-~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL-  831 (954)
T PRK05367        754 ASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVL-YTGANGRVAHECILDLRPLKESTGITVDDIAKRL-  831 (954)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-ccCCCCCcccceEEEeecccccCCCCHHHHHHHH-
Confidence              122233344444467788888888889999999997642332 212211  01122233211100012457787777 


Q ss_pred             HhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          372 KEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       372 ~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .++|+.... ..|-..+.+||++.  .+++||+++++.+..+..+..+
T Consensus       832 ~d~G~~~~t-~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~  878 (954)
T PRK05367        832 IDYGFHAPT-MSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE  878 (954)
T ss_pred             HHCCCeEee-cCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence            778998644 34545789999994  6889999999999888876543

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.72  E-value=5.4e-15  Score=140.57  Aligned_cols=281  Identities=17%  Similarity=0.151  Sum_probs=196.6

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC--------
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP--------  130 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~--------  130 (419)
                      .+++...+++...+..... ...-..+..++.+.+..++.+.++.+ ....=.+|+|+|+++..++.+....        
T Consensus        73 ~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~  150 (460)
T COG0076          73 RVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE  150 (460)
T ss_pred             CCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence            4566777777776654321 11122367899999999999988865 4445689999999999887765421        


Q ss_pred             CC------eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE--EEEeCCCCccccCCCHHHH
Q 014769          131 GA------NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA--MVIINPGNPCGNVFTYHHL  202 (419)
Q Consensus       131 gd------~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--v~i~~p~nptG~~~~~~~l  202 (419)
                      +.      +|+++.-.|+++...+..+|++...+++++. +..+|++++++++++.+..  |+-+.++.+||.+=|   +
T Consensus       151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i  226 (460)
T COG0076         151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---I  226 (460)
T ss_pred             ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---H
Confidence            11      6899999999999999999999999998876 7789999999999987766  888888999999877   9


Q ss_pred             HHHHHHHHhCCCeEEEcccccccccCC-CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769          203 QEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS  281 (419)
Q Consensus       203 ~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  281 (419)
                      ++|.++|+++++++++|.+|+++..-- ..... ..+.-..-.-+..+++|. +...+.+||++.++++.      +.+.
T Consensus       227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~-~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e~------l~~~  298 (460)
T COG0076         227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR-WDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEEA------LRRI  298 (460)
T ss_pred             HHHHHHHHHcCCcEEEEccccceeecccCccch-hhcCCCCceEEEECcccc-cCCCCCceEEEEECHHH------hhhh
Confidence            999999999999999999999876421 11111 011111112334489998 78889999999988531      2222


Q ss_pred             HHhhh---------cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769          282 IKDCL---------SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV  350 (419)
Q Consensus       282 l~~~~---------~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  350 (419)
                      +....         ++  .++.+.-...++...+.....+.+.++.++..+..+.+.+.|++.+.++.+..|. ...+.+
T Consensus       299 ~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-l~~V~f  377 (460)
T COG0076         299 LIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-LPIVAF  377 (460)
T ss_pred             hhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-cceEEE
Confidence            22111         11  1111221223333344444468889999999999999999999986688665564 445566


Q ss_pred             ecCc
Q 014769          351 KLNP  354 (419)
Q Consensus       351 ~~~~  354 (419)
                      +.++
T Consensus       378 r~~~  381 (460)
T COG0076         378 RLKD  381 (460)
T ss_pred             EcCC
Confidence            6654

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.71  E-value=4.1e-14  Score=137.04  Aligned_cols=311  Identities=17%  Similarity=0.150  Sum_probs=193.9

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCC----------C-CCCcEEEcccHHHHHHHHHHHhcC------------------
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYK----------L-SADDVYVTLGCKQAVEVILSVLAR------------------  129 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~----------~-~~~~i~~t~g~~~al~~~~~~l~~------------------  129 (419)
                      .+..++...++++.+.+|+.+..+..          . +...-++|+|+|+++..++.+..+                  
T Consensus       120 ~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~  199 (522)
T TIGR03799       120 KIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLF  199 (522)
T ss_pred             eeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccch
Confidence            44445577899999999998865311          1 112357789999998887665432                  


Q ss_pred             --------CCCeEEeeCCCCCCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhc----CCccEEEEe--CCCCc
Q 014769          130 --------PGANVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVII--NPGNP  192 (419)
Q Consensus       130 --------~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~--~p~np  192 (419)
                              ++..|++.+-.|+++...+...|+   +++.++++  .++.+|++.|++++.    .+++.++++  ..++.
T Consensus       200 ~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~  277 (522)
T TIGR03799       200 AALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE  277 (522)
T ss_pred             hhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence                    124678888899999888888888   67888875  346899999999875    344445444  55678


Q ss_pred             cccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      ||.+-|   +++|+++|+++|+++++|.+|+....-.... ..+..+..  -..+..+.+|++ .....+|.++++++. 
T Consensus       278 tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~--aDSit~d~HK~l-~~P~g~G~llvr~~~-  350 (522)
T TIGR03799       278 TGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIER--ADSVTIDAHKQL-YVPMGAGMVLFKDPA-  350 (522)
T ss_pred             CCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchh--CCEEEEChhhcC-CcCcccEEEEEeCHH-
Confidence            999999   9999999999999999999998643211111 01122211  125566899973 444668999887632 


Q ss_pred             ccchhhHHHHHHhhh--------------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          272 IFQKSGIIDSIKDCL--------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~--------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                            +.+.+....              .+..+.+..+ ..+...++......++++.++..++.+++.+.|.+.|+++
T Consensus       351 ------~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~e  423 (522)
T TIGR03799       351 ------LMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFE  423 (522)
T ss_pred             ------HHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence                  222222210              0111112111 2334444444457889999999999999999999988998


Q ss_pred             CCCCCCceEEEEeec-CcccccCC---------C-----C--HHHHHHHHHHhcCeEeecCCC-----C-CC-CCeEEEE
Q 014769          338 CPNKPEGSMVTMVKL-NPWLLEDI---------N-----D--DIEFALKLAKEESVIVTPGIY-----V-GL-KNWLRIA  393 (419)
Q Consensus       338 ~~~~p~~g~~~~~~~-~~~~~~~~---------~-----~--~~~~~~~ll~~~gv~v~~g~~-----~-~~-~~~~Ris  393 (419)
                      ++..|.-+... +++ |....+..         .     +  ...+.+++ .+.|........     + +. ...+|++
T Consensus       424 l~~~p~l~iv~-Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~-~~~G~~~vs~t~l~~~~~~g~~~~~lR~~  501 (522)
T TIGR03799       424 LVTEPELCLLT-YRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQ-REAGKSFVSRTRLTPAQYDHQPTVVFRVV  501 (522)
T ss_pred             EecCCCccEEE-EEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEecccccCCCCcEEEEEE
Confidence            66566555444 343 32110000         0     0  02333444 344554333111     1 11 2469999


Q ss_pred             ee---cCHHHHHHHHHH
Q 014769          394 FC---AEPSALKDGLGR  407 (419)
Q Consensus       394 ~~---~~~~~l~~~l~~  407 (419)
                      +.   +++++|+.+++.
T Consensus       502 ~~np~tt~~~i~~~l~~  518 (522)
T TIGR03799       502 LANPLTTHEILQDILDE  518 (522)
T ss_pred             ecCCCCCHHHHHHHHHH
Confidence            84   577888887764

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK15029 arginine decarboxylase; Provisional

Probab=99.71  E-value=1.9e-14  Score=143.22  Aligned_cols=234  Identities=11%  Similarity=0.028  Sum_probs=147.3

Q ss_pred             CCCC-HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769           83 NSGI-PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL  161 (419)
Q Consensus        83 ~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~  161 (419)
                      +.|. .+..+..|+.+    |   .....++++|+|.++.+++.+++++||+|+++..||-+....+...|+.++++.-.
T Consensus       203 p~G~I~eAq~~aA~~f----g---A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~  275 (755)
T PRK15029        203 HTGAFGESEKYAARVF----G---ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPS  275 (755)
T ss_pred             CCcHHHHHHHHHHHHh----C---CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEeccc
Confidence            4454 45555555555    2   23568999999999999999999999999999999999999999999999988532


Q ss_pred             CCCCc----ccC-----hHHHHHhhcCC--cc--------EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769          162 PERNW----EVD-----LDAVEALADKN--TA--------AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY  222 (419)
Q Consensus       162 ~~~~~----~~~-----~~~l~~~~~~~--~~--------~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~  222 (419)
                      - +.+    .++     .+.+++++...  .+        ++++++|+. -|++++   +++|+++|+++++.+++||||
T Consensus       276 ~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAh  350 (755)
T PRK15029        276 R-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAW  350 (755)
T ss_pred             c-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECcc
Confidence            2 222    234     78888877432  23        789999877 799998   999999999999999999999


Q ss_pred             cc-cccCCCCCCCcccc-----C-CCCcEEEEecCCCcCCCCCceeEE-EEeeCCCCccchhhHHHHHHhhhccccCCch
Q 014769          223 GH-LTFGSIPYTPMGLF-----G-SIVPVITLGSISKRWLVPGWRFGW-LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPT  294 (419)
Q Consensus       223 ~~-~~~~~~~~~~~~~~-----~-~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  294 (419)
                      +. +.|.. .++....+     . ....++++.|++|.  ++++..|. +-..+.....+...+.+.+....  +++||.
T Consensus       351 Gah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~id~~r~~~~l~~~q--STSPSY  425 (755)
T PRK15029        351 YGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMMHA--TTSPLY  425 (755)
T ss_pred             ccccccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCccccCHHHHHHHHHHHc--CCCcHH
Confidence            75 34433 22221122     1 11235999999998  56666544 44433211221112333332222  345565


Q ss_pred             HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      +..+.+..+........-.+..+++.+....+++.+.++
T Consensus       426 ~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~  464 (755)
T PRK15029        426 AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL  464 (755)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence            554444333222111122333444444455555555444

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.71  E-value=7.2e-15  Score=140.71  Aligned_cols=335  Identities=14%  Similarity=0.123  Sum_probs=187.2

Q ss_pred             hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +...+|+.+|||..|.-... .-.-+|.+.+++.+++.....  +.. +....++.+.+++..    +   ..+.+++++
T Consensus        42 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~----p---~~~~v~f~~  111 (431)
T PRK06209         42 VWDVDGNEYIEYGMGLRAVG-LGHAYPPVVEAVREALQDGCN--FTRPSAIELDAAESFLELI----D---GADMVKFCK  111 (431)
T ss_pred             EEeCCCCEEEEccccccchh-cCCCCHHHHHHHHHHHHhCcC--CCCCCHHHHHHHHHHHHhC----C---ccceEEEec
Confidence            33456899999998843322 223578999999999986542  322 111113444444443    1   236899999


Q ss_pred             cHHHHHHHHHHHhcC-CC-CeEEee-CCCCCCcHHHHh-----hcCCE--E--EEEeccCCCCcccChHHHHHhhcC--C
Q 014769          115 GCKQAVEVILSVLAR-PG-ANVLLP-RPGWPYYEGIAQ-----RKQVE--V--RHFDLLPERNWEVDLDAVEALADK--N  180 (419)
Q Consensus       115 g~~~al~~~~~~l~~-~g-d~vlv~-~p~~~~~~~~~~-----~~g~~--~--~~~~~~~~~~~~~~~~~l~~~~~~--~  180 (419)
                      ++++|++.+++.... .| ..|+.. ..+|+++.....     ..+..  .  ....+  .   --|++.+++.++.  +
T Consensus       112 sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~~l~~~~~  186 (431)
T PRK06209        112 NGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF--R---YNDIASLEALFEDHPG  186 (431)
T ss_pred             CHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc--C---CCCHHHHHHHHHhCCC
Confidence            999999999987542 34 345544 233332111100     00110  0  00111  0   1267888887753  3


Q ss_pred             ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      ..+.+++.|-  .|...+.+++++|.++|++||+++|+||++.++...+.....  .++..+. +  .+++|.++ .|+.
T Consensus       187 ~~aavi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~--~~gv~PD-i--~t~gK~lg-gG~p  258 (431)
T PRK06209        187 RIACVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK--LYGIVPD-L--SCFGKALG-NGFA  258 (431)
T ss_pred             CEEEEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH--HhCCCcc-e--eeehhhhc-CCcc
Confidence            4556666774  344778999999999999999999999999876443211111  1222222 2  46899965 5788


Q ss_pred             eEEEEeeCCCCccchhhHHHH--HHh---h----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          261 FGWLVTNDPNGIFQKSGIIDS--IKD---C----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~~~~--l~~---~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      +|++++++        ++++.  +..   .    ...+++++++...++.+.|+...++.   ..++++++.+++++.|+
T Consensus       259 ~~av~~~~--------~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~  327 (431)
T PRK06209        259 VSALAGKR--------EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVN  327 (431)
T ss_pred             cEEEEEHH--------HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHH
Confidence            99999865        45554  211   1    12345566677777766666532221   23344444444444443


Q ss_pred             ----cCCCCCCCCCCCceEEEEeecCcccccCCCC-H--HHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHH
Q 014769          332 ----EIPCISCPNKPEGSMVTMVKLNPWLLEDIND-D--IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDG  404 (419)
Q Consensus       332 ----~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~-~--~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~  404 (419)
                          ++ ++.......+.+..+.-+.... .+..+ .  ..+..++ .++||.+.|         ++++...++++|+++
T Consensus       328 ~~~~~~-~~~~~vr~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-~~~Gi~~p~---------l~is~~ht~~dId~~  395 (431)
T PRK06209        328 EAAAEH-GLQDHVRVSGRPCCLTYSTLDG-NGQPSQAFRTLFLQET-IRRGVLMPS---------LVVSYAHGDADIERT  395 (431)
T ss_pred             HHHHhC-CCCeEEEeecceEEEEEecCCc-ccCCcHHHHHHHHHHH-HHCCccccc---------ccccccCCHHHHHHH
Confidence                34 2221111122222222111100 00001 1  1344555 557997632         467767899999999


Q ss_pred             HHHHHHHHHHHh
Q 014769          405 LGRMKAFCQRHT  416 (419)
Q Consensus       405 l~~l~~~~~~~~  416 (419)
                      ++.+.+++++..
T Consensus       396 l~~l~~~l~~~~  407 (431)
T PRK06209        396 IDAVHGALGVYR  407 (431)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998763

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.71  E-value=1e-14  Score=130.18  Aligned_cols=347  Identities=16%  Similarity=0.101  Sum_probs=214.6

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ..+..+|||..++-...+. +..|++.+++.+++....  .+.|-..+ .-++.+.+.+.+.+    + .++.|++++++
T Consensus        53 ~~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~----~-~~~rvff~nsG  125 (433)
T KOG1401|consen   53 PDGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK----G-SAERVFFCNSG  125 (433)
T ss_pred             CCcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC----C-CccEEEEecCC
Confidence            3588999999996554433 458999999999887642  22222211 23444444444422    2 78999999999


Q ss_pred             HHHHHHHHHHhcC------CCC--eEEeeCCCCCCcHHHHhh-cCCEEEEEeccC---CCCc--ccChHHHHHhhcCCc-
Q 014769          117 KQAVEVILSVLAR------PGA--NVLLPRPGWPYYEGIAQR-KQVEVRHFDLLP---ERNW--EVDLDAVEALADKNT-  181 (419)
Q Consensus       117 ~~al~~~~~~l~~------~gd--~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~---~~~~--~~~~~~l~~~~~~~~-  181 (419)
                      |+|++.++....+      +-+  .++....+|++-...+.. .+......+.+|   +-..  --|...+++.+..+. 
T Consensus       126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~  205 (433)
T KOG1401|consen  126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG  205 (433)
T ss_pred             cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence            9999999987643      112  488899999875433322 222222222211   1000  015778888887654 


Q ss_pred             -cEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          182 -AAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       182 -~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                       .+.+|+.| +.-.|. ..+++.+..|.++|+++++++|.||++.++...|.... ..-+...+.+.   ++.|.+ ..|
T Consensus       206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a-~e~~~~~PDI~---t~aK~L-~gG  280 (433)
T KOG1401|consen  206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWA-QEYFGVTPDIT---TVAKPL-GGG  280 (433)
T ss_pred             ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHH-HHHhCcCCcce---eehhhc-cCC
Confidence             45566666 555666 47899999999999999999999999998766554321 11122222223   678984 678


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhhh----ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL----SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      +++|...+++        ++++.+..-.    ..+++.++++..++...|+... .++++.+...-+..++.+.+.+.+.
T Consensus       281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~  352 (433)
T KOG1401|consen  281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT  352 (433)
T ss_pred             ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999999976        5777766432    3457788999999988888744 6777777777788888888888765


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHH-------HhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLA-------KEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLG  406 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll-------~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~  406 (419)
                      +...+. .-..++++.+.+....... .|.......+.       .+.|+.+.|-.        -+++..++|.++.+++
T Consensus       353 ~~~i~g-~~grgl~ig~~~~~p~~~~-~d~~~~~~ll~~~~~~~~~~~gv~i~P~~--------~l~~~~~~E~i~~~l~  422 (433)
T KOG1401|consen  353 PNSICG-GVGRGLVIGFEFEGPVYKF-ADAAREQGLLILTLGKGLLEEGVRIAPIY--------LLTVEHTPEVIQRLLT  422 (433)
T ss_pred             CCceee-eeeeEEEEEEEEeechhhh-hhhhhhhhHHHHHHhcccccceEEEeccc--------cccccCcHHHHHHHHH
Confidence            333212 2344555555443211100 11111111111       11234443310        1222345899999999


Q ss_pred             HHHHHHHHH
Q 014769          407 RMKAFCQRH  415 (419)
Q Consensus       407 ~l~~~~~~~  415 (419)
                      .+.+.+.++
T Consensus       423 i~~~~l~~~  431 (433)
T KOG1401|consen  423 ILEKVLSAL  431 (433)
T ss_pred             HHHHHHHHh
Confidence            999988765

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.70  E-value=1e-14  Score=139.22  Aligned_cols=341  Identities=11%  Similarity=0.065  Sum_probs=190.9

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHH-HhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDA-VRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~-~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      ..+|+.+|||..|..... .-.-+|.+.+++.++ +...  ....|... ...++.+.+++.+....  +-+.+.+++++
T Consensus        54 D~dG~~ylD~~sg~~~~~-lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~-~~~~la~~l~~~l~~~~--p~~~~~v~f~~  129 (464)
T TIGR00699        54 DVDGNRLLDLYSQISSIP-IGYNNPALLKAAQSPEMATTLINRPALGNF-PSKDWAKILKEGILKVA--PKGQDQVWTGM  129 (464)
T ss_pred             eCCCCEEEEccCCHhhhc-CCCCCHHHHHHHHHHHHHHhhcccccCCcH-HHHHHHHHHHHhHHhhC--CCCcCEEEEeC
Confidence            346889999998854422 124689999999984 2221  11122221 12234444433222222  12336899999


Q ss_pred             cHHHHHHHHHHHhcC--------------------------CC---CeEEeeCCCCCCcHHHHhhcCC-E----------
Q 014769          115 GCKQAVEVILSVLAR--------------------------PG---ANVLLPRPGWPYYEGIAQRKQV-E----------  154 (419)
Q Consensus       115 g~~~al~~~~~~l~~--------------------------~g---d~vlv~~p~~~~~~~~~~~~g~-~----------  154 (419)
                      ++++|++.+++....                          +|   .+|+....+|++....+..... .          
T Consensus       130 SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~  209 (464)
T TIGR00699       130 SGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAF  209 (464)
T ss_pred             CcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence            999999999987631                          11   2699999999986544332211 1          


Q ss_pred             -EEEEeccCCC-Cc-----------ccChHHHHHhhcC--CccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEE
Q 014769          155 -VRHFDLLPER-NW-----------EVDLDAVEALADK--NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       155 -~~~~~~~~~~-~~-----------~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li  217 (419)
                       ...++..... .+           .-+++.+++.+..  +..+.+|+.| ....|... +.++++++.++|+++|+++|
T Consensus       210 ~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI  289 (464)
T TIGR00699       210 DWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFI  289 (464)
T ss_pred             CceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence             0111111000 00           0124556666642  2345566666 55567654 89999999999999999999


Q ss_pred             EcccccccccCCCCCCCccccCCC--CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh-hhccccCCch
Q 014769          218 ADEVYGHLTFGSIPYTPMGLFGSI--VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-CLSIYSDIPT  294 (419)
Q Consensus       218 ~De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~  294 (419)
                      +||++.++...|..+ ....++..  +.++   +++|.++..|    +++.++         ....... ....+++.++
T Consensus       290 ~DEV~tGfGrtG~~f-a~e~~gv~~~PDi~---t~gK~lg~gG----~~~~~~---------~~~~~~~~~~~~T~~gnp  352 (464)
T TIGR00699       290 VDEVQTGVGATGKFW-AHEHWNLDDPPDMV---TFSKKFQTAG----YFFHDP---------AFRPNKPYRQFNTWMGDP  352 (464)
T ss_pred             EeeeeeCCCCCcchh-HHHhcCCCCCCCEE---EehhhhccCC----ccccch---------hccCCCCcccccCCCCCH
Confidence            999998876555322 11222221  2233   6789864444    333321         1111011 1223566777


Q ss_pred             HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc----CCC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHH
Q 014769          295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE----IPC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALK  369 (419)
Q Consensus       295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~  369 (419)
                      ++..++.+.|+....+   ...++.+++.+++.+.|++    +|. +..+.....|+++-+.++..     .....+...
T Consensus       353 ~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~-----~~~~~i~~~  424 (464)
T TIGR00699       353 SRALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE-----AKRDKLLKK  424 (464)
T ss_pred             HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH-----HHHHHHHHH
Confidence            7777777666653222   2223333333444444433    442 22121114577777777531     013455555


Q ss_pred             HHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          370 LAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       370 ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                      + .++||++.+.    ..+.+||.+  ..++++|++++++|.+++
T Consensus       425 ~-~~~Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       425 A-RNNGVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             H-HHCCcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence            5 5579999764    247899998  479999999999998764

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.70  E-value=6e-14  Score=133.57  Aligned_cols=314  Identities=16%  Similarity=0.119  Sum_probs=183.1

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCC-----CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATN-----SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA  132 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd  132 (419)
                      .+.++.+.+++.+.+.......|.-.     .-+..+++.+++++      +  .+..+++++++.|+..++.+ +.+||
T Consensus        91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~------g--ae~alvv~sg~aAi~l~l~~-l~~Gd  161 (454)
T TIGR00474        91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT------G--AEDALVVNNNAAAVLLALNT-LAKGK  161 (454)
T ss_pred             CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHH-hCCcC
Confidence            35689999999888764321122211     11367888888887      2  23466778888899888865 47899


Q ss_pred             eEEeeCCCCCC------cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc--c--cCCCHHHH
Q 014769          133 NVLLPRPGWPY------YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC--G--NVFTYHHL  202 (419)
Q Consensus       133 ~vlv~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt--G--~~~~~~~l  202 (419)
                      +|++.+..|..      +...+...|++++.++...    ..++++++++++++++++++++++|++  |  ...|   +
T Consensus       162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---l  234 (454)
T TIGR00474       162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---I  234 (454)
T ss_pred             EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---H
Confidence            99999876432      2345677899988876421    257899999999999999999999985  5  3667   9


Q ss_pred             HHHHHHHHhCCCeEEEcccccccccCC----CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          203 QEIAEMARKLRVMVVADEVYGHLTFGS----IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       203 ~~i~~~~~~~~~~li~De~~~~~~~~~----~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      ++|+++|+++|+++++|...+.+.-.+    ...+.+......+-.+++.|.+|.++.|  ..|++++++        ++
T Consensus       235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~~  304 (454)
T TIGR00474       235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------EL  304 (454)
T ss_pred             HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH--------HH
Confidence            999999999999999997644321000    0111111111122238888999986555  479998865        45


Q ss_pred             HHHHHhhhc-cccCCchHH----HHHHHHHHcccch--------HHHHHHHHHHHHHHHHHHHHhhcC--CCCCC--CC-
Q 014769          279 IDSIKDCLS-IYSDIPTFI----QGAIPQILEKTKE--------DFFCKLIDTLRESAEICYDGVKEI--PCISC--PN-  340 (419)
Q Consensus       279 ~~~l~~~~~-~~~~~~~~~----~~a~~~~l~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~--~~-  340 (419)
                      ++.++...- ......-..    +..+..++.. ..        .-+....++++++...+.+.|+..  +++.+  +. 
T Consensus       305 i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~-~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~  383 (454)
T TIGR00474       305 IERLKKNPLTRALRVDKLTLAALEATLRLYLDP-EKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPG  383 (454)
T ss_pred             HHhhhhchhHHHHhhChHHHHHHHHHHHHHhCc-hhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEc
Confidence            554443210 000111111    1222222221 11        112222345566777777777653  33221  10 


Q ss_pred             --CCCc---------eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHH
Q 014769          341 --KPEG---------SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRM  408 (419)
Q Consensus       341 --~p~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l  408 (419)
                        ...|         ++-+.++.+     + .+..++...| ++....|..-   -.++.+.+.+ +..+++++..++.|
T Consensus       384 ~~~~ggg~~p~~~l~~~~v~~~~~-----~-~~~~~l~~~l-r~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       384 LSQVGGGSLPDERLPSYAVTLTPD-----G-LSAEKLEARL-RELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL  453 (454)
T ss_pred             CCcccCCCCcCCCCCeEEEEEecC-----C-CCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence              1111         222222211     1 2455665544 6656433221   1257788888 56788888877765

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.69  E-value=1.3e-15  Score=141.16  Aligned_cols=239  Identities=16%  Similarity=0.188  Sum_probs=146.6

Q ss_pred             CCCCCC-HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEe
Q 014769           81 ATNSGI-PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD  159 (419)
Q Consensus        81 ~~~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~  159 (419)
                      ..+.|. .+..+..|+.+.       .....++++|+|.++.+++.+++++||+|+++..+|.+....+...|+.+++++
T Consensus        62 ~~p~G~I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~  134 (417)
T PF01276_consen   62 HDPEGIIKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIP  134 (417)
T ss_dssp             TTTBTHHHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEE
T ss_pred             cCCccHHHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEec
Confidence            334454 466666677662       134578899999999999999999999999999999999999999999998887


Q ss_pred             ccCCCCc----ccCh-----HHHHHhhcC--CccE---EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-
Q 014769          160 LLPERNW----EVDL-----DAVEALADK--NTAA---MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-  224 (419)
Q Consensus       160 ~~~~~~~----~~~~-----~~l~~~~~~--~~~~---v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-  224 (419)
                      .. .+.+    .++.     +.++++++.  ..+.   +++++|+. -|++++   +++|+++|+++++.|++||||+. 
T Consensus       135 p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah  209 (417)
T PF01276_consen  135 PE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAH  209 (417)
T ss_dssp             EE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TT
T ss_pred             CC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEcccccc
Confidence            54 2222    3455     888888764  2344   89999887 799998   99999999999999999999975 


Q ss_pred             cccCCCCCCCccccCC----CCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHH
Q 014769          225 LTFGSIPYTPMGLFGS----IVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA  299 (419)
Q Consensus       225 ~~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a  299 (419)
                      +.|. ..+.+...++.    +..++++.|++|.  ++++. .+++-.+.... .....+.+.+...  .+.+|+.+....
T Consensus       210 ~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~-v~~~~~~~~l~~~--~TTSPSY~lmAS  283 (417)
T PF01276_consen  210 FGFH-PLPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRI-VDHERVNEALSMH--QTTSPSYPLMAS  283 (417)
T ss_dssp             GGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCC-TTHHHHHHHHHHH--S-SS--HHHHHH
T ss_pred             ccCC-CCccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCc-ccHHHHHHHHHHH--cCCChHHHHHHH
Confidence            3444 22222222222    2357999999998  56655 45566655321 2111233333222  244666666555


Q ss_pred             HHHHHcccchHHHHHHHHHHHHHHHHHHHHh---hcCCCCC
Q 014769          300 IPQILEKTKEDFFCKLIDTLRESAEICYDGV---KEIPCIS  337 (419)
Q Consensus       300 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~  337 (419)
                      +..+........-++..++..++.+.+++.|   .+..++.
T Consensus       284 lD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~  324 (417)
T PF01276_consen  284 LDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFK  324 (417)
T ss_dssp             HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSE
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEe
Confidence            5444333212333344444445555555555   4454554

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.69  E-value=6.3e-14  Score=140.63  Aligned_cols=310  Identities=13%  Similarity=0.073  Sum_probs=198.7

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc-cHHHHHHHHHHHhcC-------C-CCeEEeeCCCCCCcH
Q 014769           78 NCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTL-GCKQAVEVILSVLAR-------P-GANVLLPRPGWPYYE  145 (419)
Q Consensus        78 ~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~-g~~~al~~~~~~l~~-------~-gd~vlv~~p~~~~~~  145 (419)
                      +.|.|   .+|+.++...+.+++.+..|..    .+-+-+ +++.+...++.++..       + .++|+++.-.|....
T Consensus       530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd----~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp  605 (954)
T PRK12566        530 HPFAPREQAEGYRAMIDELEAWLCAITGFD----AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP  605 (954)
T ss_pred             CCCCchhhhcCHHHHHHHHHHHHHHHHCCC----eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence            46777   7899888888888888766643    344444 555555556655432       2 267788888886656


Q ss_pred             HHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769          146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY  222 (419)
Q Consensus       146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~  222 (419)
                      ..+...|++++.++.++  +..+|+++|++.++   +++.+|.+++|++-++..   +.+++|+++|+++|+++++|.++
T Consensus       606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~  680 (954)
T PRK12566        606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN  680 (954)
T ss_pred             HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence            66788899999999863  34799999999987   466677788888755443   44999999999999999999998


Q ss_pred             cccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCCCccchhhHHHHHHhh------------h
Q 014769          223 GHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPNGIFQKSGIIDSIKDC------------L  286 (419)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~l~~~------------~  286 (419)
                      .....   .......++.+   ++.++++|+|+.|    |.-+|.+.+..        .+...+..+            .
T Consensus       681 ~~a~~---~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--------~L~pfLp~~P~~d~~G~~~r~g  746 (954)
T PRK12566        681 LNAQV---GLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--------HLAPFVANHPVVPVEGPDPNNG  746 (954)
T ss_pred             hhhcc---CCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--------hhhhhccCCCCcCCCCCCCCCC
Confidence            64221   11112345554   8888999987643    55577766654        122222211            0


Q ss_pred             --ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE---EEEeecCcccccCCC
Q 014769          287 --SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM---VTMVKLNPWLLEDIN  361 (419)
Q Consensus       287 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~---~~~~~~~~~~~~~~~  361 (419)
                        +.....+.....++..++.....+ +.+.......+.+++.+.|.+..++. + .+..+.   -+.+.+.........
T Consensus       747 a~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g~  823 (954)
T PRK12566        747 AVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTGI  823 (954)
T ss_pred             ceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccCC
Confidence              111112222233444444443345 66666666788889999997743333 2 332222   122233211100112


Q ss_pred             CHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       362 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +..++.++|+ ++||.... ..|-..+++|+++.  .+++|||++++.|+.+.++.
T Consensus       824 ~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~  877 (954)
T PRK12566        824 SEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEI  877 (954)
T ss_pred             CHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence            5577888886 88997644 34545789999994  68899999999999888774

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.68  E-value=1.6e-14  Score=125.04  Aligned_cols=340  Identities=16%  Similarity=0.163  Sum_probs=210.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC---CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN---CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      |...+||=.+..... .-.-+|.+.+++.++.+.-.++   .|.+-  ..++.+-+++++    |    -+.|+-++.+.
T Consensus        58 Gk~ylDflsaysaVn-qGhchpki~~aLqeq~~kLtlssrafYnd~--~~~f~~~vt~lf----~----~~kvlpmnTGa  126 (427)
T KOG1402|consen   58 GKEYLDFLSAYSAVN-QGHCHPKIIKALQEQADKLTLSSRAFYNDV--LGEFAEYVTKLF----G----YDKVLPMNTGA  126 (427)
T ss_pred             ccchhhhhhhhhhcc-cCCCCHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHHHHHHhc----C----cceeeecccch
Confidence            455566654422211 1235789999999987753221   34442  234444444443    3    45788888889


Q ss_pred             HHHHHHHHHhcC--------CCC--eEEeeCCCCCCcHHHHhhcCCEEEEE----eccCCCCcc---cChHHHHHhhcCC
Q 014769          118 QAVEVILSVLAR--------PGA--NVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPERNWE---VDLDAVEALADKN  180 (419)
Q Consensus       118 ~al~~~~~~l~~--------~gd--~vlv~~p~~~~~~~~~~~~g~~~~~~----~~~~~~~~~---~~~~~l~~~~~~~  180 (419)
                      ||.+.++....+        |.+  .|+....+|++-.-.+..++.+...+    |..|.....   -|.++|+.++++.
T Consensus       127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~  206 (427)
T KOG1402|consen  127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSP  206 (427)
T ss_pred             hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcCC
Confidence            999999887652        322  34444555554221111121111000    000000000   1688999999876


Q ss_pred             ccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          181 TAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       181 ~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ..+.+++.| +...|++ .|..++++..++|.+||+++|.||++.++...|+-..  -.+....+.+++  |.|.++..=
T Consensus       207 ~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la--~d~env~PDivi--lgKalSGG~  282 (427)
T KOG1402|consen  207 NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLA--CDYENVRPDIVI--LGKALSGGV  282 (427)
T ss_pred             CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEE--eehhhcCCCeEE--EeccccCCe
Confidence            667788888 7778875 6778999999999999999999999999887765321  112221122332  459864433


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC---
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP---  334 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---  334 (419)
                      .+++.+.+.+        +++-.++... ..+++.|+++..++.++|+-..++.   ..++..+.-+.++..|.+++   
T Consensus       283 ~Pvsavl~~~--------~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eek---L~era~~lG~~l~~~L~~l~~~~  351 (427)
T KOG1402|consen  283 YPVSAVLADD--------DIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEK---LVERAAKLGEILRDQLNKLQKKF  351 (427)
T ss_pred             eeeEEEEecH--------HHHhccCCCccccccCCChHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhccccc
Confidence            7788888765        5666665543 2356788888888877777543333   34455666677777777653   


Q ss_pred             -CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHH
Q 014769          335 -CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAF  411 (419)
Q Consensus       335 -~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~  411 (419)
                       .+. .....-|++.-+.+......+ .++++.+..+ ++.|++.-|-.    .+-||+++  ..++++++++++.|.+.
T Consensus       352 p~~v-~~VRGrGl~~ai~i~~~~~~~-~~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k~  424 (427)
T KOG1402|consen  352 PHVV-KEVRGRGLLNAIVINPSKTSG-QDAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEKT  424 (427)
T ss_pred             cchh-heeeccceEEEEEeccccccc-hhHHHHHHcc-cccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHHH
Confidence             222 113455777777776433211 2566777665 78899877754    46899998  57999999999999987


Q ss_pred             HH
Q 014769          412 CQ  413 (419)
Q Consensus       412 ~~  413 (419)
                      +.
T Consensus       425 i~  426 (427)
T KOG1402|consen  425 IA  426 (427)
T ss_pred             hc
Confidence            63

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.68  E-value=2.4e-14  Score=133.03  Aligned_cols=322  Identities=14%  Similarity=0.037  Sum_probs=196.0

Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCCCeEEeeCCCCC
Q 014769           64 AEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWP  142 (419)
Q Consensus        64 v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vlv~~p~~~  142 (419)
                      .++++.+..-..  ..+++  ...++-+.+.+.+++.++.+.+.+-++++.|+|.++++++..+. ++|++|++.. .|.
T Consensus        19 ~~~~~~~~~~~~--~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG   93 (374)
T TIGR01365        19 SIEELKNAPLGR--SHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG   93 (374)
T ss_pred             hHHHHhhhhccc--CcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence            566665543221  23333  34566666666666666643333346779999999999999998 4888998764 443


Q ss_pred             C-cH-HHHhhcCCE-EEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          143 Y-YE-GIAQRKQVE-VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       143 ~-~~-~~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      . +. ++++..|.+ +..+..  +.+..+++++++.    + +.|++++....||+..|   ++++...+  ++.++|+|
T Consensus        94 ~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~----~-~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVD  161 (374)
T TIGR01365        94 KGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF----K-NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICD  161 (374)
T ss_pred             HHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC----C-CCEEEecCCCchheecc---cccccccc--CCCcEEEE
Confidence            2 23 677888984 666653  3444678888763    1 23678888889999998   44544322  48999999


Q ss_pred             ccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc-ch-h---hHHHHHH---------h-
Q 014769          220 EVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF-QK-S---GIIDSIK---------D-  284 (419)
Q Consensus       220 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-~~-~---~~~~~l~---------~-  284 (419)
                      .+.+...    ....+..     -.+++.|..|.+++|+ .++++++++..... +. .   ++...+.         . 
T Consensus       162 avSs~g~----~~l~~d~-----iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~  231 (374)
T TIGR01365       162 ATSAAFA----QDLDYHK-----LDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKI  231 (374)
T ss_pred             ccchhcC----CCCChhH-----CcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhh
Confidence            9988632    2222221     2377788899977653 36677765421000 00 0   0000011         0 


Q ss_pred             h-hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CC--ceEEEEeecCcccccC
Q 014769          285 C-LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNK-PE--GSMVTMVKLNPWLLED  359 (419)
Q Consensus       285 ~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~--~g~~~~~~~~~~~~~~  359 (419)
                      . ..+.++++....+++..+++...++ .++.+.++++++.+.+++.+++++.+..+.. +.  +.....+.++......
T Consensus       232 ~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~  311 (374)
T TIGR01365       232 FEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDA  311 (374)
T ss_pred             hcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccc
Confidence            0 1223455555666666666543333 6999999999999999999999832553321 11  2223334454321100


Q ss_pred             CC-C-----HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHH
Q 014769          360 IN-D-----DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       360 ~~-~-----~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~  413 (419)
                      .. +     ..++.. .++++||.+.+|..-..+..|||+. + .+.++++.+++.|.=+.+
T Consensus       312 ~~~~~~~~~~~~~~~-~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~  372 (374)
T TIGR01365       312 LDEDAQADFAKELIS-TLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA  372 (374)
T ss_pred             cccchhhHHHHHHHH-HHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence            00 1     344544 4477799999887655568999998 4 689999999999875443

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.68  E-value=9.9e-14  Score=127.46  Aligned_cols=335  Identities=14%  Similarity=0.069  Sum_probs=209.5

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +.++|+-| |+     .+|++|++++.+.+-+..        .+..++  -..++-+.+.+.+++.++++-+.+-+++..
T Consensus         4 ~~~nF~aG-Pa-----~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~G   75 (364)
T PRK12462          4 NQLNFSGG-PG-----ALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDEYGVVFLQG   75 (364)
T ss_pred             ccceecCC-Cc-----CCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence            46888888 32     467888888877664421        122222  234555566666666666543334456677


Q ss_pred             cHHHHHHHHHHHhcCCCCeEE-eeCCCCCC--cHHHHhhcCCEEEEEeccCCCC--cccChHHHHHhhcCCccEEEEeCC
Q 014769          115 GCKQAVEVILSVLARPGANVL-LPRPGWPY--YEGIAQRKQVEVRHFDLLPERN--WEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vl-v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      |+|.+++.+...++.+||+++ +..-++++  +...++.+| ++..+......+  ..++++.+  .+.++.+.|.+++-
T Consensus        76 ggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~N  152 (364)
T PRK12462         76 GSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSN  152 (364)
T ss_pred             cHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccC
Confidence            799999999999999999665 44444443  345556666 444433211112  23455554  23345677888887


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP  269 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  269 (419)
                      ...||+.++        ++.+.++.++|+|.+.+.+.    .+..+..+     .++..+..|.+|.||  ++.++.++.
T Consensus       153 ETstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~-----dvi~agsQKnlgP~G--ltvvivs~~  213 (364)
T PRK12462        153 ETVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAY-----GMVYAHAQKNLGPAG--VTVAIIRRA  213 (364)
T ss_pred             CCCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHc-----cEEEeeccccCCCCc--eEEEEECHH
Confidence            888999886        22223689999999888632    22333333     266778899998777  677777652


Q ss_pred             CC--ccc-hhhHHHHHHh--hhccccCCchHHHHHHHHHHcccchH--HHHHHHHHHHHHHHHHHHHhhcCCCCCC-CCC
Q 014769          270 NG--IFQ-KSGIIDSIKD--CLSIYSDIPTFIQGAIPQILEKTKED--FFCKLIDTLRESAEICYDGVKEIPCISC-PNK  341 (419)
Q Consensus       270 ~~--~~~-~~~~~~~l~~--~~~~~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~  341 (419)
                      ..  ... -|.+.+....  ..+...+|+....+++..+++...++  .++.+.++.+++.+.+++.+.+.+++.. +..
T Consensus       214 al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~  293 (364)
T PRK12462        214 LLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAH  293 (364)
T ss_pred             HHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence            10  000 0111111111  11234578888888988888876555  8999999999999999999998765441 112


Q ss_pred             C--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          342 P--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       342 p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +  .+-+-+.+++++.     ..+.+|.... +++|+.-..|..  .-+.+|+|+  +.+.|.++.+++-++++-+++
T Consensus       294 ~~~RS~mnv~f~~~~~-----~l~~~f~~~a-~~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~~  363 (364)
T PRK12462        294 RAARSTMNVAFRFRQP-----RLDTLFKEQS-TEAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKDFAIRH  363 (364)
T ss_pred             hhhcCcceEEEEcCCH-----HHHHHHHHHH-HHCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            2  2345555666532     1245665555 778998766653  356799999  578888888888777776653

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.68  E-value=1e-13  Score=140.07  Aligned_cols=347  Identities=16%  Similarity=0.098  Sum_probs=206.2

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV  122 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~  122 (419)
                      ..+|+..|.-........+|++.+++.+++....+  +....-..+-...+|+.|.+..+ .-..++|+++++|++|++.
T Consensus       366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~h--v~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~  442 (817)
T PLN02974        366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGH--VMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEV  442 (817)
T ss_pred             eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCc--cccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHH
Confidence            67888777332211112489999999999876322  21111123555566666654111 0113689999999999999


Q ss_pred             HHHHhcC-----C----------------CCeEEeeCCCCCCcHHHHhhcCCE---------E------EEEecc-----
Q 014769          123 ILSVLAR-----P----------------GANVLLPRPGWPYYEGIAQRKQVE---------V------RHFDLL-----  161 (419)
Q Consensus       123 ~~~~l~~-----~----------------gd~vlv~~p~~~~~~~~~~~~g~~---------~------~~~~~~-----  161 (419)
                      +++...+     .                ..+|+....+|++....+...+..         .      ..++..     
T Consensus       443 AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~  522 (817)
T PLN02974        443 ALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMR  522 (817)
T ss_pred             HHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccc
Confidence            9886521     1                246899999998754333332210         0      001000     


Q ss_pred             --------CCC----------Ccc-----cC------------hHHHHHhhc-------CCccEEEEeCC--CCccccC-
Q 014769          162 --------PER----------NWE-----VD------------LDAVEALAD-------KNTAAMVIINP--GNPCGNV-  196 (419)
Q Consensus       162 --------~~~----------~~~-----~~------------~~~l~~~~~-------~~~~~v~i~~p--~nptG~~-  196 (419)
                              +..          .|.     ++            .+.+++.+.       .+..+.+|..|  +.-.|++ 
T Consensus       523 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~  602 (817)
T PLN02974        523 NGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLL  602 (817)
T ss_pred             cccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCccc
Confidence                    000          000     00            134555553       23456677777  4666775 


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccch
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~  275 (419)
                      .+.++++++.++|++||+++|.||++.+|...|..+ ....++..+.++   +++|.+ ..| +++|.+++++       
T Consensus       603 ~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~f-a~e~~gv~PDIi---~~gKgL-tgG~~Plaa~l~~~-------  670 (817)
T PLN02974        603 IDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVES-AWELLGCKPDIA---CYAKLL-TGGLVPLAATLATE-------  670 (817)
T ss_pred             CCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchh-hHHhcCCCCCEE---eecccc-cCCCCccEEEEEcH-------
Confidence            589999999999999999999999999987776543 223334333344   578994 567 6999999976       


Q ss_pred             hhHHHHHHh------h-hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHH----HHhhcCCCCCCCCCCC
Q 014769          276 SGIIDSIKD------C-LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICY----DGVKEIPCISCPNKPE  343 (419)
Q Consensus       276 ~~~~~~l~~------~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~----~~l~~~~~~~~~~~p~  343 (419)
                       ++.+.+..      . ...+++.++++.+++.+.|+.... +..+...+...+..+.+.    +.|.++|.+.-+  ..
T Consensus       671 -~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V--Rg  747 (817)
T PLN02974        671 -EVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV--VS  747 (817)
T ss_pred             -HHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE--Ee
Confidence             57776642      1 234677888888888877775432 222333333333333333    334445443312  23


Q ss_pred             ceEEEEeecCcccc-cCC--CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          344 GSMVTMVKLNPWLL-EDI--NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       344 ~g~~~~~~~~~~~~-~~~--~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                      -|+++-+.+..... .+.  .-...+...++.++||++.|.     .+.+|+.+  .+++++++++++.|.+.+
T Consensus       748 ~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        748 LGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             eeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            46666676643110 000  012345555542789999884     25788765  578999999999998765

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.67  E-value=3.9e-13  Score=135.90  Aligned_cols=321  Identities=13%  Similarity=0.048  Sum_probs=200.5

Q ss_pred             CCCCCC---CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--------CCCeEEeeCCCCCCcH
Q 014769           77 FNCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--------PGANVLLPRPGWPYYE  145 (419)
Q Consensus        77 ~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--------~gd~vlv~~p~~~~~~  145 (419)
                      ++.|.|   .+|+.++...+.+|+.+..|++  . --+..++++.+-...+.++..        +.++|+++.-.|....
T Consensus       516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP  592 (939)
T TIGR00461       516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--A-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP  592 (939)
T ss_pred             cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--C-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence            345555   3677777777777777766655  2 223345555555544444432        2367889999998778


Q ss_pred             HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769          146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY  222 (419)
Q Consensus       146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~  222 (419)
                      ..+...|++++.++.+  .++.+|+++|++++++   ++++|++++|+| +|..-+  .+++|+++|+++|.++++|.++
T Consensus       593 asa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq  667 (939)
T TIGR00461       593 ASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGAN  667 (939)
T ss_pred             HHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecC
Confidence            8889999999999875  3457999999999974   788899999999 677643  3899999999999999999999


Q ss_pred             cccccCCCCCCCccccCCCCcEEEEecCCCcCC----CCCceeEEEEeeCCCCc-cchhhHHH---------HHHhhhcc
Q 014769          223 GHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL----VPGWRFGWLVTNDPNGI-FQKSGIID---------SIKDCLSI  288 (419)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~-~~~~~~~~---------~l~~~~~~  288 (419)
                      .....   .......++.|   ++++|.+|+|+    ..|..+|++.++..-.. +....+.+         .++...+.
T Consensus       668 ~~al~---~l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~  741 (939)
T TIGR00461       668 MNAQV---GLTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAA  741 (939)
T ss_pred             hhhCC---CCCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccccc
Confidence            65211   11112334444   88889999765    34667999999752100 00000000         00000010


Q ss_pred             ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE---EEEeecCcccccCCCCHHH
Q 014769          289 YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM---VTMVKLNPWLLEDINDDIE  365 (419)
Q Consensus       289 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~---~~~~~~~~~~~~~~~~~~~  365 (419)
                       ...+......+..++.....+.+.+..+....+.+++.+.|.+.  ++.......+.   -+.++++........+..+
T Consensus       742 -~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~d  818 (939)
T TIGR00461       742 -PYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPLKAKTGIEAID  818 (939)
T ss_pred             -ccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccchhhhcCCCHHH
Confidence             12222233334444444446888888888899999999999873  34232222222   1334554211111125678


Q ss_pred             HHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          366 FALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       366 ~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +.++| .++|+.... ..|-..+.+-|.+  ..+.++||++++.+.++-++..
T Consensus       819 IakrL-~d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~  869 (939)
T TIGR00461       819 VAKRL-QDYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEIN  869 (939)
T ss_pred             HHHHH-HhCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence            88787 567997433 3343445555555  5688999999999988776654

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.63  E-value=4.5e-14  Score=125.00  Aligned_cols=341  Identities=15%  Similarity=0.158  Sum_probs=220.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG------KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      +|.+++||+..+.   ..+...+.+.+.....++.-      .-..|+...-...+.+.||+|+        ..++-++-
T Consensus        92 ~G~~~~N~aS~Nf---L~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~--------G~E~aivY  160 (467)
T KOG1358|consen   92 DGKDVLNFASANF---LGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM--------GTEDAIVY  160 (467)
T ss_pred             cCceeecccchhh---hhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh--------CCcceeee
Confidence            4778888988873   34566788888777777652      2234777666678999999998        34566677


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC------------c
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------------T  181 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~  181 (419)
                      +-+..++..++.+++++||.|.+..-........++...-.+.++...       |.+.++..+.+.            +
T Consensus       161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~  233 (467)
T KOG1358|consen  161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALT  233 (467)
T ss_pred             ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccc
Confidence            777888999999999999999999988888888777777777766532       555555443221            1


Q ss_pred             cEEEEeC-CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC--CCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          182 AAMVIIN-PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       182 ~~v~i~~-p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      +..+++. -.-+||.+.|   +.+|+++..++...+|.||.|+....+.  .+.......+..+-.++++|+.-+++..|
T Consensus       234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G  310 (467)
T KOG1358|consen  234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG  310 (467)
T ss_pred             eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence            2333333 3456999999   8999999999999999999999876653  33322223333334588889988876666


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                         |+.+++.  ...    ..+++.... -++...++....++..++..  .++-.+..+.++.....+...|+...++.
T Consensus       311 ---gFc~G~~--~i~----~hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~~  379 (467)
T KOG1358|consen  311 ---GFCAGKS--FIA----DHQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGFI  379 (467)
T ss_pred             ---ceeecce--eeE----eeeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCceE
Confidence               7777643  111    223443322 12223333444444444443  23333455566776677777787765666


Q ss_pred             CCCCCCceEEEEeecCcccccCCCC----HHHHHHHHHHhcCeEeecCCCCC------CCCeEEEEe--ecCHHHHHHHH
Q 014769          338 CPNKPEGSMVTMVKLNPWLLEDIND----DIEFALKLAKEESVIVTPGIYVG------LKNWLRIAF--CAEPSALKDGL  405 (419)
Q Consensus       338 ~~~~p~~g~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gv~v~~g~~~~------~~~~~Ris~--~~~~~~l~~~l  405 (419)
                      +...|.+... .+.+..... ...+    -.+++++.+.+ ++.+.....-.      .+..+||++  +.++|+++++.
T Consensus       380 v~~~~~SPi~-hl~l~~~~~-s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~  456 (467)
T KOG1358|consen  380 VSGSPESPII-HLQLERSYG-SREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAA  456 (467)
T ss_pred             EecCcCCcee-eeeeccccc-chHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHH
Confidence            4545555433 344543210 0011    24566676666 88876544321      256899999  46899999999


Q ss_pred             HHHHHHHHHH
Q 014769          406 GRMKAFCQRH  415 (419)
Q Consensus       406 ~~l~~~~~~~  415 (419)
                      ..|+++....
T Consensus       457 ~~ik~~~~~~  466 (467)
T KOG1358|consen  457 ELIKEVASAV  466 (467)
T ss_pred             HHHHHHHHhh
Confidence            9999887653

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.61  E-value=6.9e-13  Score=130.83  Aligned_cols=174  Identities=13%  Similarity=0.154  Sum_probs=120.8

Q ss_pred             CCCCCCCCH-HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH-HhhcCCEEE
Q 014769           79 CYATNSGIP-PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI-AQRKQVEVR  156 (419)
Q Consensus        79 ~Y~~~~g~~-~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~  156 (419)
                      ....+.|.. +..+..|+.+    |   .....++++|+|.++.+++.+++.+||.|+++..+|-+.... +...|+.++
T Consensus       168 dL~~~eG~i~eAq~~AA~~f----g---Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PV  240 (720)
T PRK13578        168 DLLIHEGAAKDAQKHAAKVF----N---ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV  240 (720)
T ss_pred             CCCCCChHHHHHHHHHHHHh----C---CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEE
Confidence            333445543 5555555555    2   134678999999999999999999999999999999998875 888999998


Q ss_pred             EEeccCCCCcc----cCh-----HHHHHhhcCC----------ccEEEEeCCCCccccCCCHHHHHHHHHH-HHhCCCeE
Q 014769          157 HFDLLPERNWE----VDL-----DAVEALADKN----------TAAMVIINPGNPCGNVFTYHHLQEIAEM-ARKLRVMV  216 (419)
Q Consensus       157 ~~~~~~~~~~~----~~~-----~~l~~~~~~~----------~~~v~i~~p~nptG~~~~~~~l~~i~~~-~~~~~~~l  216 (419)
                      ++.-.. +.++    ++.     +.+++++...          .++++|++|+. -|++++   +++|+++ ++.++ .|
T Consensus       241 Yl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~l  314 (720)
T PRK13578        241 YLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YI  314 (720)
T ss_pred             Eeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cE
Confidence            876432 2232    354     4477776543          36788888876 799999   8888888 67777 99


Q ss_pred             EEccccccc-ccCCC--CCCCc-cccCC-CCcEEEEecCCCcCCCCCceeE-EEEee
Q 014769          217 VADEVYGHL-TFGSI--PYTPM-GLFGS-IVPVITLGSISKRWLVPGWRFG-WLVTN  267 (419)
Q Consensus       217 i~De~~~~~-~~~~~--~~~~~-~~~~~-~~~~i~~~s~sK~~~~~G~r~G-~~~~~  267 (419)
                      ++||||+.. .|...  ..+.+ ...+. ++-++++.|.+|.  ++++-.+ ++-.+
T Consensus       315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LHvk  369 (720)
T PRK13578        315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIHKK  369 (720)
T ss_pred             EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhhcC
Confidence            999999764 34331  12211 12333 3447999999998  5665544 44443

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.60  E-value=7.5e-13  Score=123.85  Aligned_cols=308  Identities=17%  Similarity=0.148  Sum_probs=185.4

Q ss_pred             hCCchhHHHHHHHHHHhhhcC----CCCCeeeccCCCCCCCCCCCChHHHH-HHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           19 AAPAVTVKTSLASIIDSVNKN----DPRPVVPLGYGDPTAFPCFRTAVEAE-DAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~v~-~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      ..++.++.+++.++.+.+...    ..+.+..+-.+.       +.+..+. +.+...+. .....|...+...++++.+
T Consensus        13 p~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~-------~~~~~i~~~~l~~~~n-~n~~~~~~~P~~~~~E~~v   84 (373)
T PF00282_consen   13 PEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGG-------PSPASILADLLASALN-QNGFTWEASPAATEIEREV   84 (373)
T ss_dssp             HSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT---------CHHHHHHHHHHHHHT--BTTSTTTSHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCC-------ccHHHHHHHHHHhhhc-ccccccccccccccchHHH
Confidence            345556777887776655432    122332222221       2233433 33333443 3333455445678999999


Q ss_pred             HHHHHhhCCCCC-----CCCcEEEcccHHHHHHHHHHHhcC--------CC-----C-eEEeeCCCCCCcHHHHhhcCCE
Q 014769           94 ADYLSRDLPYKL-----SADDVYVTLGCKQAVEVILSVLAR--------PG-----A-NVLLPRPGWPYYEGIAQRKQVE  154 (419)
Q Consensus        94 a~~l~~~~~~~~-----~~~~i~~t~g~~~al~~~~~~l~~--------~g-----d-~vlv~~p~~~~~~~~~~~~g~~  154 (419)
                      .+|+.+.+|.+.     +...-++|+|+|+++..++.+..+        .|     + .|++.+-+|+++...+..+|+.
T Consensus        85 i~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg  164 (373)
T PF00282_consen   85 IRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLG  164 (373)
T ss_dssp             HHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSE
T ss_pred             HHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeE
Confidence            999999888762     124568999999999888765532        12     2 4566666899999999999999


Q ss_pred             EEEEeccCCCCcccChHHHHHhhcC---C--cc-EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC
Q 014769          155 VRHFDLLPERNWEVDLDAVEALADK---N--TA-AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG  228 (419)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~l~~~~~~---~--~~-~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~  228 (419)
                      ++.+++++  ++.+|+++|++++..   +  ++ .|+.+..+..||.+=|   +++|.++|+++++|+++|.+|++..+-
T Consensus       165 ~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~~~~wlHVDaA~gg~~~~  239 (373)
T PF00282_consen  165 VRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEKYNIWLHVDAAYGGSALL  239 (373)
T ss_dssp             EEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHHCT-EEEEEETTGGGGGG
T ss_pred             EEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhccccceeeeecccccccccc
Confidence            99999875  568999999887653   2  23 4555666788998866   999999999999999999999983321


Q ss_pred             CCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-----------------hcccc
Q 014769          229 SIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-----------------LSIYS  290 (419)
Q Consensus       229 ~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-----------------~~~~~  290 (419)
                      .+... ....+... .-|.+ +++|. +.....+|++.++++..      +...+...                 ...+.
T Consensus       240 ~~~~~~~~~gi~~a-dSit~-d~HK~-l~~P~~~~~~l~r~~~~------l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl  310 (373)
T PF00282_consen  240 SPEYRHLLFGIERA-DSITI-DPHKW-LGVPYGCGVLLVRDKSD------LRDAFSINADYLGNDDRESDESYDYGDYTL  310 (373)
T ss_dssp             HCTTGGGGTTGGGE-SEEEE-ETTTT-TS-SSS-EEEEESSGGG------HHGGGEEEETCTT-S-SSS-GGGCEEEGSS
T ss_pred             cccccccccccccc-ccccc-chhhh-hcCCccceeEEeecccc------hHHHhccChhhhcccccccccccccccccc
Confidence            11111 11112111 12433 79998 56677899999987431      11111000                 01111


Q ss_pred             CCch-HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769          291 DIPT-FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT  348 (419)
Q Consensus       291 ~~~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  348 (419)
                      ..+- .....+-..+.....+.+++..++..+..+++.+.|++.++++++..|.-+..+
T Consensus       311 ~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vc  369 (373)
T PF00282_consen  311 QGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVC  369 (373)
T ss_dssp             SSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEE
T ss_pred             cccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEE
Confidence            1222 111222223333335788899999999999999999998888866556555443

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.59  E-value=6.5e-13  Score=130.87  Aligned_cols=306  Identities=13%  Similarity=0.054  Sum_probs=177.4

Q ss_pred             CCCCCCCH-HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEE
Q 014769           80 YATNSGIP-PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHF  158 (419)
Q Consensus        80 Y~~~~g~~-~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~  158 (419)
                      ...+.|.. +..+.+|+.+    |   .....++++|+|.++.+++.+++.+||.|+++..+|-+....+...|+.++++
T Consensus       190 Ll~~~G~i~eAe~~AA~~f----g---Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl  262 (714)
T PRK15400        190 LLDHSGPHKEAEEYIARVF----N---ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYF  262 (714)
T ss_pred             CCCCChHHHHHHHHHHHHh----C---CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence            33345543 5555556555    2   12457889999999999999999999999999999999888999999999988


Q ss_pred             eccCCCCc----ccC-----hHHHHHhhcCC-----ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc
Q 014769          159 DLLPERNW----EVD-----LDAVEALADKN-----TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH  224 (419)
Q Consensus       159 ~~~~~~~~----~~~-----~~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  224 (419)
                      .... +.+    .++     .+.+++++...     +..+++++|+. -|.+++   +++|.++|..++  +++||||..
T Consensus       263 ~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwga  335 (714)
T PRK15400        263 RPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVP  335 (714)
T ss_pred             cccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchh
Confidence            6432 222    234     78888887642     22688888854 799999   788888888877  689999986


Q ss_pred             c-ccCCCC--CCCccccC-CCCcEEEEecCCCcCCCCCceeEE-EEeeCCCCccchhhHHHHHHhhhccccCCchHHHHH
Q 014769          225 L-TFGSIP--YTPMGLFG-SIVPVITLGSISKRWLVPGWRFGW-LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA  299 (419)
Q Consensus       225 ~-~~~~~~--~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a  299 (419)
                      . .|...-  ..++.... +++-++++.|.+|.  ++++..+. +-.+..   .+...+.+.+...  .+++|+.+..+.
T Consensus       336 h~~F~p~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg~---vd~~~~n~a~~m~--~STSPsY~l~AS  408 (714)
T PRK15400        336 YTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKGD---VNEETFNEAYMMH--TTTSPHYGIVAS  408 (714)
T ss_pred             hhccCcccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcCC---CCHHHHHHHHHHH--cCCCcHHHHHHH
Confidence            4 333211  12222111 12346999999998  56665444 333221   2111222223222  234555554443


Q ss_pred             HH---HHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCCCC-------------c-------------
Q 014769          300 IP---QILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC------ISCPNKPE-------------G-------------  344 (419)
Q Consensus       300 ~~---~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~p~-------------~-------------  344 (419)
                      +.   ++++.   ..-++..+...+....+++.|.++++      +.++ .|+             .             
T Consensus       409 LD~a~~~m~~---~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~-~~~~~~~~~~w~~~p~~~whgf~~~~~~~~  484 (714)
T PRK15400        409 TETAAAMMKG---NAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHM  484 (714)
T ss_pred             HHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEec-ChhhcccchhcccCccccccCccccccccc
Confidence            33   33332   12233334444444455555544433      3322 111             0             


Q ss_pred             ---eEEEEeecCccccc-----CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          345 ---SMVTMVKLNPWLLE-----DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       345 ---g~~~~~~~~~~~~~-----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                         ..=+++..+.....     .......+. +.|+++||.+--...+  .--+-++++.++++++.+++.|.++-+
T Consensus       485 ~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~-~~L~e~gI~~E~~d~~--~iLfl~s~g~t~~~~~~L~~aL~~f~~  558 (714)
T PRK15400        485 YLDPIKVTLLTPGMKKDGTMSDFGIPASIVA-KYLDEHGIVVEKTGPY--NLLFLFSIGIDKTKALSLLRALTDFKR  558 (714)
T ss_pred             ccCCceEEEEeCCCCCCccccccCCCHHHHH-HHHHHcCCEEEecCCC--eEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence               01112222210000     011234444 4458899988654421  112444557889999999998887644

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.58  E-value=1.4e-12  Score=133.47  Aligned_cols=299  Identities=14%  Similarity=0.087  Sum_probs=186.0

Q ss_pred             ChHHHHHHHHHHHhC-CCCCCCCCC--CC----CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCC
Q 014769           60 TAVEAEDAIVDAVRS-GKFNCYATN--SG----IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPG  131 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~-~~~~~Y~~~--~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~g  131 (419)
                      .|+.+.+++.+.... ..++.|.+.  +|    +.++++.|++++      +++++++.++.++|++.+.++.++. .+|
T Consensus       117 ~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~~~g  190 (993)
T PLN02414        117 VPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNILKG  190 (993)
T ss_pred             CCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhcccC
Confidence            556666766654331 122334431  33    456777888887      7899999999999999999887763 334


Q ss_pred             --CeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHH
Q 014769          132 --ANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI  205 (419)
Q Consensus       132 --d~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  205 (419)
                        ++|++++..|+.....+    +..|++++.++++..     +      ...+....+++..|+ .+|.+.+   +++|
T Consensus       191 ~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vlvq~P~-~~G~v~d---v~~I  255 (993)
T PLN02414        191 KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVLVQYPA-TDGEVLD---YAEF  255 (993)
T ss_pred             CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEEEecCC-CCeEEcC---HHHH
Confidence              78999999999865444    456888888775321     1      111122333433444 4999988   9999


Q ss_pred             HHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC---CCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769          206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW---LVPGWRFGWLVTNDPNGIFQKSGIIDSI  282 (419)
Q Consensus       206 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---~~~G~r~G~~~~~~~~~~~~~~~~~~~l  282 (419)
                      +++|+++|+++++ .++.... .  ...+...++.+   |++++..|+.   |..|.+.|++++++.        +.+.+
T Consensus       256 ~~~ah~~GaL~iV-aad~lal-~--~l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~~--------~~r~~  320 (993)
T PLN02414        256 VKNAHANGVKVVM-ATDLLAL-T--MLKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQE--------YKRLM  320 (993)
T ss_pred             HHHHHHcCCEEEE-EECHHHh-c--CCCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECHH--------HHhhC
Confidence            9999999999999 4433211 1  11123445554   8889999983   124666999999762        21111


Q ss_pred             H---------------------hh----hccccCCchHHHHHHHHHHc-----ccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          283 K---------------------DC----LSIYSDIPTFIQGAIPQILE-----KTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       283 ~---------------------~~----~~~~~~~~~~~~~a~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      .                     ..    +.-..+.|.-...++.+.+.     ......+++..++...+..++.+.|..
T Consensus       321 PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~  400 (993)
T PLN02414        321 PGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK  400 (993)
T ss_pred             CCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh
Confidence            1                     00    00012333322222222222     122356788888999999999999987


Q ss_pred             CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHH
Q 014769          333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMK  409 (419)
Q Consensus       333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~  409 (419)
                      . |+++...|..+ .+.++++        +..++..+| .++||.+....    .+.+|+|+.  ++++||+.+++.|.
T Consensus       401 ~-G~~~~~~~~f~-~vt~~~~--------~~~~v~~~L-~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~l~  464 (993)
T PLN02414        401 L-GFQVQSLPFFD-TVKVKCS--------DADAIADAA-AKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKVFA  464 (993)
T ss_pred             c-CCccCCCCCcC-eEEEecC--------CHHHHHHHH-HHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHHHc
Confidence            5 67744333222 2233443        356676666 66799775432    467999994  68999999999996

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.57  E-value=4e-12  Score=125.39  Aligned_cols=170  Identities=15%  Similarity=0.098  Sum_probs=116.8

Q ss_pred             CCCCCC-HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEe
Q 014769           81 ATNSGI-PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD  159 (419)
Q Consensus        81 ~~~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~  159 (419)
                      ..+.|. .+..+.+|+.+    |   .....++++|+|.++.+++.+++.+||.|+++..+|-+....+...|+.++++.
T Consensus       191 l~~~G~i~eAe~~aA~~f----g---Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~  263 (713)
T PRK15399        191 LDHTGPHLEAEEYIARTF----G---AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLK  263 (713)
T ss_pred             CCCChHHHHHHHHHHHHh----C---CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEec
Confidence            334454 35555566655    2   124678899999999999999999999999999999998889999999999876


Q ss_pred             ccCCCCc----ccCh-----HHHHHhhcCC-----ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeE-EEcccccc
Q 014769          160 LLPERNW----EVDL-----DAVEALADKN-----TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMV-VADEVYGH  224 (419)
Q Consensus       160 ~~~~~~~----~~~~-----~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~De~~~~  224 (419)
                      -.. +.+    .++.     +.+++++...     ++.+++++|+. -|.+++   +++|.++|   |+.+ ++||||..
T Consensus       264 P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhga  335 (713)
T PRK15399        264 PTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVP  335 (713)
T ss_pred             ccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchh
Confidence            322 222    2344     7888877542     35788888854 899999   77777777   4555 69999986


Q ss_pred             c-ccCCC--CCCCcccc-CCCCcEEEEecCCCcCCCCCceeE-EEEee
Q 014769          225 L-TFGSI--PYTPMGLF-GSIVPVITLGSISKRWLVPGWRFG-WLVTN  267 (419)
Q Consensus       225 ~-~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~  267 (419)
                      . .|...  +..++... +.+.-++++.|.+|.  ++++..+ ++-.+
T Consensus       336 h~~F~p~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk  381 (713)
T PRK15399        336 YTHFHPIYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIK  381 (713)
T ss_pred             hhhcCcccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeec
Confidence            3 33321  11222211 233345779999998  5676654 44443

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.57  E-value=5.7e-12  Score=129.69  Aligned_cols=295  Identities=14%  Similarity=0.125  Sum_probs=185.6

Q ss_pred             ChHHHHHHHHHHHhCCCCCCCCCC-----CCC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-C
Q 014769           60 TAVEAEDAIVDAVRSGKFNCYATN-----SGI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-R  129 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~  129 (419)
                      .|+.+.+.+.+.  .+.++.|.|.     +|.    .++++.+++++      ++++.++.+..++|++.+.++.++. .
T Consensus        90 ~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~  161 (954)
T PRK05367         90 TPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVS  161 (954)
T ss_pred             CcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhc
Confidence            344454544432  1234566653     333    45566677766      7889999999999999998888863 3


Q ss_pred             C--CCeEEeeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769          130 P--GANVLLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ  203 (419)
Q Consensus       130 ~--gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  203 (419)
                      +  +++|++++..|+.....    ++..|++++.++...      +.+      .+++..+++.+| |.+|.+.+   ++
T Consensus       162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d~~------~~~~~~vlvq~p-~~~G~i~d---~~  225 (954)
T PRK05367        162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------ALD------HDDVFGVLLQYP-GTSGEVRD---YT  225 (954)
T ss_pred             cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------CCC------cccEEEEEEecC-CCCeeecc---HH
Confidence            4  48999999999876543    466799988887532      111      123444555555 56999988   99


Q ss_pred             HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc-----CCCCCceeEEEEeeCCCCccchhhH
Q 014769          204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR-----WLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-----~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +|+++|+++|+++++|.....+..    ..+...++.+   |++++..|+     ||.|  ..|++++++.        +
T Consensus       226 ~i~~~ah~~Gal~~vda~~~Al~~----l~~pge~GaD---i~vgs~qkfg~P~g~GGP--~aGflavr~~--------~  288 (954)
T PRK05367        226 ALIAAAHARGALVAVAADLLALTL----LTPPGEMGAD---IAVGSAQRFGVPMGFGGP--HAAYFAVRDA--------Y  288 (954)
T ss_pred             HHHHHHHHcCCEEEEEehhhhccC----CCChhhcCCC---EEEeeCcccCCCCCCCCC--CEEEEEECHH--------H
Confidence            999999999999999875533221    1123455555   888999997     4444  4999998752        2


Q ss_pred             HHHHHhh-------------------------hccccCCchHHHHHH-----HHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          279 IDSIKDC-------------------------LSIYSDIPTFIQGAI-----PQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       279 ~~~l~~~-------------------------~~~~~~~~~~~~~a~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      .+.+...                         +.-..+.|.....++     ..++.......+++..++...+.+++.+
T Consensus       289 ~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~  368 (954)
T PRK05367        289 KRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAA  368 (954)
T ss_pred             HhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence            2222100                         000011122111111     1112222356788888999999999999


Q ss_pred             HhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHH
Q 014769          329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLG  406 (419)
Q Consensus       329 ~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~  406 (419)
                      .|+.. |++....+..+ .+.++++       .+..++..+| .++||.+..-    .++.+|+|+  .+++++|+.+++
T Consensus       369 ~L~~~-G~~~~~~~~f~-~~~~~~~-------~~~~~i~~~l-~~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~  434 (954)
T PRK05367        369 GLRAL-GLEVVHDSFFD-TLTVEVG-------GDAAAVLARA-LAAGINLRRV----DDDHVGISLDETTTREDLAALLA  434 (954)
T ss_pred             HHHhc-CcccCCCCCCC-eEEEeCC-------CCHHHHHHHH-HHCCceeccc----cCCEEEEEecccCCHHHHHHHHH
Confidence            99774 77733222112 2223332       1466777777 5679987321    156899999  468899999999


Q ss_pred             HHH
Q 014769          407 RMK  409 (419)
Q Consensus       407 ~l~  409 (419)
                      .+.
T Consensus       435 ~l~  437 (954)
T PRK05367        435 VFG  437 (954)
T ss_pred             HHc
Confidence            996

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.54  E-value=2e-14  Score=129.14  Aligned_cols=190  Identities=15%  Similarity=0.155  Sum_probs=132.9

Q ss_pred             ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCC
Q 014769           60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP  139 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p  139 (419)
                      ++|++.+++.++.. ++- .|+......++++.+++.+        ..+..++++++|.+..++++++++|++.|++.++
T Consensus         7 ~~~~m~~a~~~a~~-gd~-~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~   76 (290)
T PF01212_consen    7 PTPAMLEAMAAANV-GDD-AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT   76 (290)
T ss_dssp             S-HHEEHHHHHTTS-B-C-CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred             CCHHHHHHHHcccc-CCc-ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence            57888899855443 333 6888778889999999998        3356679999999999999999999999999999


Q ss_pred             CCCC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCc-cccCCCHHHHHHHHHHH
Q 014769          140 GWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNP-CGNVFTYHHLQEIAEMA  209 (419)
Q Consensus       140 ~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~np-tG~~~~~~~l~~i~~~~  209 (419)
                      +|..   ........|.++..++..  ++..+++++|++.+..      ++++|.|.+|+|. .|+++|.+++++|.++|
T Consensus        77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a  154 (290)
T PF01212_consen   77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA  154 (290)
T ss_dssp             EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred             ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence            7752   334446688888887643  2257999999998754      4678899999985 48999999999999999


Q ss_pred             HhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          210 RKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       210 ~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      +++|+.++.|.+--.-..  .+.....+..+   -. ++..|++|..++++   |.+++-+
T Consensus       155 ~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~---~D-~v~~~~tK~~g~~~---Gavl~~~  208 (290)
T PF01212_consen  155 REHGLPLHMDGARLANAAAALGVSLAEIAAG---AD-SVSFGGTKNGGAPG---GAVLAGN  208 (290)
T ss_dssp             HHHT-EEEEEETTHHHHHCHHHHHHHHHHTT---SS-EEEEETTSTT-SSS---EEEEEES
T ss_pred             HhCceEEEEehhhHHHhhhcccccHHHHhhh---CC-EEEEEEEccccccc---ceEEEec
Confidence            999999999987432111  01111112211   12 44448999876665   6655544

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.54  E-value=4.2e-13  Score=121.10  Aligned_cols=287  Identities=13%  Similarity=0.142  Sum_probs=188.2

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW  166 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  166 (419)
                      .++++.+|+|+    |   .++.+++.-| -+.....+.+++.||.-|+..+..|.++...++..|+.++.+.++     
T Consensus       185 kelE~l~A~f~----g---~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-----  251 (519)
T KOG1357|consen  185 KELEELVARFL----G---VEDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-----  251 (519)
T ss_pred             HHHHHHHHHhc----C---CcceEEEecc-ccccccCcceeecCCcceeeccccchheeccccccCceEEEEecC-----
Confidence            45666666665    2   2455555555 777777888999999999999999999999999999998887653     


Q ss_pred             ccChHHHHHhhcC-------C-----ccEEEEe-CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--
Q 014769          167 EVDLDAVEALADK-------N-----TAAMVII-NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--  231 (419)
Q Consensus       167 ~~~~~~l~~~~~~-------~-----~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--  231 (419)
                        |...|++.+++       +     .+.+++. .-...-|.+..   +.+++++++++..+++.||+|+....+..+  
T Consensus       252 --dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~tGrg  326 (519)
T KOG1357|consen  252 --DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGATGRG  326 (519)
T ss_pred             --CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCCCCcc
Confidence              34444444321       1     1233333 33456677766   899999999999999999999987654332  


Q ss_pred             CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc---c-ccCCchHHHHHHHHHHccc
Q 014769          232 YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS---I-YSDIPTFIQGAIPQILEKT  307 (419)
Q Consensus       232 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~~~~~~~a~~~~l~~~  307 (419)
                      .-.+...+..+..|.+++|.|+++.+|   ||+.+++        ++++.++....   + +..+++++|..+. .++..
T Consensus       327 vce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk--------~lid~lrt~s~~~~yat~~sppvaqq~~s-sl~~i  394 (519)
T KOG1357|consen  327 VCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSK--------ELIDYLRTPSPSALYATSLSPPVAQQILT-SVKHI  394 (519)
T ss_pred             eeeccCCCchhheeecceehhhccccc---ceecCcH--------HHHhhhccCCCceeecccCChHHHHHHHH-HHHhh
Confidence            222333344445699999999999998   9999976        68888876532   1 1223344444333 22221


Q ss_pred             ----chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE--EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769          308 ----KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM--VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       308 ----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  381 (419)
                          ..+..++..+++.++..+++..|+.. ++.+. ......  -+.+-.+.       ....+-..+++ +++.+...
T Consensus       395 ~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivy-G~~dSpVvplll~~~~-------k~~~f~r~~l~-~nigvVvv  464 (519)
T KOG1357|consen  395 MGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVY-GNNDSPVVPLLLYGPA-------KIVAFSREMLE-RNIGVVVV  464 (519)
T ss_pred             cCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEe-cCCCCCcceeeecCcc-------cccHHHHHHHh-cCceEEEE
Confidence                24567778889999999999999886 65522 333221  11221221       23455556655 46766555


Q ss_pred             CCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769          382 IYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       382 ~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~  413 (419)
                      .+...   ....|++.  ..+.|+++.+++.+.+.=.
T Consensus       465 gfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~  501 (519)
T KOG1357|consen  465 GFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD  501 (519)
T ss_pred             eCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence            44432   35678887  3578999999998887643

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.54  E-value=1.8e-11  Score=113.18  Aligned_cols=339  Identities=16%  Similarity=0.176  Sum_probs=207.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ..-+|||-.-.-+    .-+.+...++|..    ++ ..|+.+..+.+|++.+++++        .-+.++.|+.++.+-
T Consensus        40 ~dV~IDLrSDTgT----~apS~~m~aAM~~----GD-D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRgaE  102 (467)
T TIGR02617        40 EDVFIDLLTDSGT----GAVTQSMQAAMMR----GD-EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAE  102 (467)
T ss_pred             CCeEEECccCCCC----CCCCHHHHHHHHc----CC-cccccCchHHHHHHHHHHHh--------CCceEEECCCCchHH
Confidence            3446777665432    1245666676654    33 25887778899999999998        235688899999999


Q ss_pred             HHHHHHhcC-CCCeEEeeCC-------CCCC-cHHHHhhcCCEEEEEecc--------CCCCcccChHHHHHhhcCC---
Q 014769          121 EVILSVLAR-PGANVLLPRP-------GWPY-YEGIAQRKQVEVRHFDLL--------PERNWEVDLDAVEALADKN---  180 (419)
Q Consensus       121 ~~~~~~l~~-~gd~vlv~~p-------~~~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~---  180 (419)
                      .+++..+++ ||+.+++..+       .|+. ....+...|+.+..+..+        ......+|++.+++++++.   
T Consensus       103 ~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~  182 (467)
T TIGR02617       103 QIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN  182 (467)
T ss_pred             HHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence            999999988 6787775443       2222 234567778776665321        1223478999999998741   


Q ss_pred             -ccEEE--EeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc----------ccCCCCCCCcc-c-cCCCCcEE
Q 014769          181 -TAAMV--IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL----------TFGSIPYTPMG-L-FGSIVPVI  245 (419)
Q Consensus       181 -~~~v~--i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~----------~~~~~~~~~~~-~-~~~~~~~i  245 (419)
                       ...+.  +++ |.-.|+++|.+.++++.++|++||+.++.|.+--.-          .+.+.+...+. . +... . .
T Consensus       183 ~i~~v~~tlt~-N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~a-D-s  259 (467)
T TIGR02617       183 NVPYIVATITC-NSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYA-D-M  259 (467)
T ss_pred             CceeeeeeEEE-ecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccC-C-E
Confidence             11221  221 334689999999999999999999999999864321          12222221111 0 0111 1 3


Q ss_pred             EEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhh------ccccCCchHHHHHHHHHHcccc-hHHHHHHHH
Q 014769          246 TLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCL------SIYSDIPTFIQGAIPQILEKTK-EDFFCKLID  317 (419)
Q Consensus       246 ~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~  317 (419)
                      +.-|+||.++.| |   |+++++++ .++   ++.++.+...      .++++.+.-...|++.-|.+.. .+++..+..
T Consensus       260 vt~slsKglgApvG---g~Lag~d~-~~~---~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~  332 (467)
T TIGR02617       260 LAMSAKKDAMVPMG---GLLCFKDD-SFF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIN  332 (467)
T ss_pred             EEEEcCCCCCCccc---ceEEecch-hHH---HHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHH
Confidence            445899997666 4   55555542 111   3444444431      1234445555556665565533 566666665


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc----ccccCCCCHHHHHHHHHHhcCeEee-cCCCC-CC-----
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP----WLLEDINDDIEFALKLAKEESVIVT-PGIYV-GL-----  386 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~-~~-----  386 (419)
                      +++    +|.+.|.+. |+.++ . .||.-++++...    ... ..-....++.+|..+.||.-. -|+.. +.     
T Consensus       333 qv~----yl~~~L~~~-Gvpi~-~-~Gghav~iDa~~~lphip~-~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~  404 (467)
T TIGR02617       333 QVQ----YLVNGLEEI-GVVCQ-Q-AGGHAAFVDAGKLLPHIPA-DQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTG  404 (467)
T ss_pred             HHH----HHHHHHHhC-CCcEE-e-cCccEEEEehhhhCCCCCh-hhCcHHHHHHHHHHHcCcceEeecceecccCCCCC
Confidence            555    455555554 77744 5 667666654321    111 112467888899899999633 23321 11     


Q ss_pred             ------CCeEEEEee---cCHHHHHHHHHHHHHHHHH
Q 014769          387 ------KNWLRIAFC---AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       387 ------~~~~Ris~~---~~~~~l~~~l~~l~~~~~~  414 (419)
                            -..+|+++-   .+.+.++...+.+..+.++
T Consensus       405 ~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~  441 (467)
T TIGR02617       405 KQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_pred             ccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence                  146999993   4889999999999887754

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.51  E-value=2e-11  Score=115.67  Aligned_cols=304  Identities=14%  Similarity=0.084  Sum_probs=180.9

Q ss_pred             CCCCC-HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEec
Q 014769           82 TNSGI-PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL  160 (419)
Q Consensus        82 ~~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~  160 (419)
                      ++.|. .+..+..|+.+.       .....++++|++.++..+..+++.+||.|+++.++|-+....+...|+.++++.-
T Consensus        67 ~p~G~i~eAqe~aA~~fg-------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p  139 (557)
T COG1982          67 DPEGPIKEAQELAARVFG-------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEP  139 (557)
T ss_pred             CCCccHHHHHHHHHHHhC-------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecC
Confidence            34554 355555565552       1236899999999999999999999999999999999998889999999888764


Q ss_pred             cCCCC----cccChHHHHHhhcC--Cc-cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769          161 LPERN----WEVDLDAVEALADK--NT-AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT  233 (419)
Q Consensus       161 ~~~~~----~~~~~~~l~~~~~~--~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  233 (419)
                      ..+..    .+++.+.+.+++..  .. +.+++++|+. -|++++   +++|.+.+...++|+.+|+++....--....+
T Consensus       140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~  215 (557)
T COG1982         140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLP  215 (557)
T ss_pred             CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCc
Confidence            33221    35788998886644  23 6778888776 799999   88899999999999999999875321111111


Q ss_pred             CccccCCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHH--HH-ccc
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQ--IL-EKT  307 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~--~l-~~~  307 (419)
                      .  .-...+.++++.|.+|.  ++++. .+++-+++. ...    -.++++....  .+.+|+.+..+.+..  .+ ...
T Consensus       216 ~--~~~~~~~~~~tqS~HK~--l~alSQaS~iHv~~~-~~~----~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~  286 (557)
T COG1982         216 E--SALNGGADFVTQSTHKL--LAALSQASMIHVKDG-RAV----NHERFNEALMMHQSTSPSYPLMASLDVARMQEGNA  286 (557)
T ss_pred             c--hhhhcCceEEEechhhh--hhhhhhhHHHhhCCC-ccC----CHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhh
Confidence            1  11123457999999998  45544 444554431 122    1233443322  233444444333322  11 111


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--------------------ceEEEEeecCcccccCCCCHHHHH
Q 014769          308 KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--------------------GSMVTMVKLNPWLLEDINDDIEFA  367 (419)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--------------------~g~~~~~~~~~~~~~~~~~~~~~~  367 (419)
                      .....++..+..-+.++.+++.+.+++++.++.++.                    +..=+.+..|..   |. .+..+.
T Consensus       287 G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~---Gi-pg~~v~  362 (557)
T COG1982         287 GRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEF---GI-PGAIVA  362 (557)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCC---CC-cHHHHH
Confidence            123344445666667777777777766666443332                    111222333322   22 455665


Q ss_pred             HHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          368 LKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       368 ~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      ..| +++|+...-...+  ..-+-++++.  .+....++.|.++.+.
T Consensus       363 ~~L-~e~gii~e~~~d~--~~lll~~~~~--gk~~~lv~~L~~f~r~  404 (557)
T COG1982         363 KYL-REHGIIPEETGDY--SNLLLFSPGI--GKWQTLVDRLLEFKRR  404 (557)
T ss_pred             HHH-HHcCCeeeecCCc--eeeEEeeecc--chHHHHHHHHHHHHHh
Confidence            555 7778876543321  1122233332  4555555556555553

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.50  E-value=2.2e-13  Score=126.32  Aligned_cols=272  Identities=18%  Similarity=0.162  Sum_probs=162.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||..|.-+.. .-.-+|.+.+++.+++.....  ........+....+++.+.+..+  -..+++++++++++
T Consensus        13 ~dG~~~lD~~~~~~~~~-lGh~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse   87 (339)
T PF00202_consen   13 VDGREYLDFMSGYGSVN-LGHNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSE   87 (339)
T ss_dssp             TTSEEEEESSHHHHTTT-T-BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHH
T ss_pred             CCCCEEEECCCCcccee-cCCCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhccc--cccceeeeccCchH
Confidence            35888999987733321 122568999999998876432  12122334566677777766553  25579999999999


Q ss_pred             HHHHHHHHhc------C-C-CCeEEeeCCCCCCcHHHHhhcC-------------CEEEEEeccCCCC---cccChHHHH
Q 014769          119 AVEVILSVLA------R-P-GANVLLPRPGWPYYEGIAQRKQ-------------VEVRHFDLLPERN---WEVDLDAVE  174 (419)
Q Consensus       119 al~~~~~~l~------~-~-gd~vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~---~~~~~~~l~  174 (419)
                      |++.+++...      . + -.+|+....+|++....+...+             ..+..+|.+....   .....+.++
T Consensus        88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  167 (339)
T PF00202_consen   88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALE  167 (339)
T ss_dssp             HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHH
Confidence            9999999876      2 2 3789999999987543332221             1223344321100   000011122


Q ss_pred             H---hhcCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEec
Q 014769          175 A---LADKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS  249 (419)
Q Consensus       175 ~---~~~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  249 (419)
                      +   ....+..+.+|..| +...|. ..+.+.+++|.++|+++|+++|+||++.++...|..+ ....++..+.++   +
T Consensus       168 ~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~PDiv---~  243 (339)
T PF00202_consen  168 ELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDPDIV---T  243 (339)
T ss_dssp             HHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSSSEE---E
T ss_pred             HHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccCccc---c
Confidence            2   22233445666677 444454 5688899999999999999999999999987666533 233344444445   4


Q ss_pred             CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      ++|.+ ..|+++|.+++++        ++.+.+.... ..++..++++..++.+.|+....+.   ..++++++.+++.+
T Consensus       244 ~gK~l-~gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~---~~~~~~~~g~~l~~  311 (339)
T PF00202_consen  244 FGKGL-GGGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEED---LLERVRELGERLRE  311 (339)
T ss_dssp             EEGGG-GTTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHH
T ss_pred             cccch-hhhhhcccccccc--------hhhccccccccccccccchHhhhhhhhHHHhhccHH---HHHHHHHHHHHHHH
Confidence            56995 4569999999976        4555553332 3356678888888888777633221   23334444444444


Q ss_pred             Hhh
Q 014769          329 GVK  331 (419)
Q Consensus       329 ~l~  331 (419)
                      .|+
T Consensus       312 ~L~  314 (339)
T PF00202_consen  312 GLR  314 (339)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            444

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=99.42  E-value=4.2e-11  Score=102.75  Aligned_cols=362  Identities=10%  Similarity=0.022  Sum_probs=213.9

Q ss_pred             HHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCC
Q 014769           26 KTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKL  105 (419)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~  105 (419)
                      ..|.....+.+...++...+|-=.+....   -.-+|++.++...++..-..       ...-+...+.++.++....-.
T Consensus        31 ~kivRaq~QYmfDE~g~~yLDCInNVaHv---ghchp~VV~A~~kQmat~~t-------N~RFlhd~lv~cA~~l~stlP  100 (452)
T KOG1403|consen   31 LKIVRAQGQYMFDEEGTRYLDCINNVAHV---GHCHPEVVRAGAKQMATIST-------NNRFLHDELVQCARTLTSTLP  100 (452)
T ss_pred             hhhehhccceeeccCcccHHHHhhhhhhc---ccCCHHHHHHHHHHHhHhcc-------cchhhHHHHHHHHHHHhhcCC
Confidence            34444334444344455555422222221   23578888888888754221       123445555555444333233


Q ss_pred             CCCcEEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-------C--C-EEEEEeccCCC-----Ccc-
Q 014769          106 SADDVYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-------Q--V-EVRHFDLLPER-----NWE-  167 (419)
Q Consensus       106 ~~~~i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-------g--~-~~~~~~~~~~~-----~~~-  167 (419)
                      .-+-+++++++++|..++++...+  +..-|++.+..|+++.......       |  . ++.++.+-|..     .+. 
T Consensus       101 eLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~  180 (452)
T KOG1403|consen  101 ELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD  180 (452)
T ss_pred             CceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence            456789999999999999988653  2344555666676543222111       1  1 12223221110     000 


Q ss_pred             ----------cChHHHHHhh----cCCc-cEEEEe-CCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCC
Q 014769          168 ----------VDLDAVEALA----DKNT-AAMVII-NPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI  230 (419)
Q Consensus       168 ----------~~~~~l~~~~----~~~~-~~v~i~-~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~  230 (419)
                                .-.+.+++.+    .... .+.++. .-++-.|++ .|..+.+..++..+.+|.+.|.||++.+|..-|.
T Consensus       181 ~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~  260 (452)
T KOG1403|consen  181 KMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGS  260 (452)
T ss_pred             ccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccch
Confidence                      0112222222    2121 222333 335667775 5677899999999999999999999999887788


Q ss_pred             CCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHccc
Q 014769          231 PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKT  307 (419)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~  307 (419)
                      .++.+..++-.+.++   ++.|. ...|.+++.+++..        ++.+++....   ..+++.|+.+.++..++|...
T Consensus       261 hyWafq~y~fiPDIV---tmgKp-mGNGhPVa~Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~  328 (452)
T KOG1403|consen  261 HYWAFQTYNFIPDIV---TMGKP-MGNGHPVAAVATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVC  328 (452)
T ss_pred             hhhhhhhhccccchh---eeccc-CCCCCeeeEEeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHHHH
Confidence            877777666443344   56799 67899999999865        6888887631   125677888888888888765


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769          308 KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-PEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIY  383 (419)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~  383 (419)
                      ..+.+.++..++.+..+.+...++.  ..+|+.. ..-|.|+-+++-....   +....+...+.+|-+.++|+++....
T Consensus       329 e~E~Lq~ha~~vG~~L~~lL~~~k~--kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP  406 (452)
T KOG1403|consen  329 EDENLQEHAQQVGEKLEVLLRRLKQ--KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP  406 (452)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhh--hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC
Confidence            5677777777777766666666654  2233322 2347777666522110   11112445667776778898865322


Q ss_pred             CCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769          384 VGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       384 ~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~  413 (419)
                        .++.+.|-+  +.++++.++.+..|.+++.
T Consensus       407 --h~NilKiKPPmCFneena~e~v~~ld~iLT  436 (452)
T KOG1403|consen  407 --HRNILKIKPPMCFNEENADEFVLGLDEILT  436 (452)
T ss_pred             --CCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence              134556654  6788888888888887775

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.41  E-value=2.4e-09  Score=105.07  Aligned_cols=292  Identities=15%  Similarity=0.107  Sum_probs=175.0

Q ss_pred             hhHHHHHHHHHHhhhcCCCCCeeeccC-C-CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhh
Q 014769           23 VTVKTSLASIIDSVNKNDPRPVVPLGY-G-DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD  100 (419)
Q Consensus        23 ~~i~~~~~~~~~~~~~~~~~~~i~l~~-g-~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~  100 (419)
                      .....+++++.+.+.++    .+.+.. | .-...+..+..+.+...+...+-+.....|..+++...+++.+.+++.+.
T Consensus        60 ~~~~~~l~~l~~~l~~~----sv~~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l  135 (608)
T TIGR03811        60 NNMKDVLDELSSRLRTE----SVPWHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATL  135 (608)
T ss_pred             cCHHHHHHHHHHHHhcC----CCCCCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHH
Confidence            35677777777666332    112111 0 00001122345666655555555544445555567889999999999998


Q ss_pred             CCCCCCCCcEEEcccHHHHHHHHHHHhcCC--------------------------------------------------
Q 014769          101 LPYKLSADDVYVTLGCKQAVEVILSVLARP--------------------------------------------------  130 (419)
Q Consensus       101 ~~~~~~~~~i~~t~g~~~al~~~~~~l~~~--------------------------------------------------  130 (419)
                      .|.+.  ..=.||+|||.|+..++...++.                                                  
T Consensus       136 ~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~  213 (608)
T TIGR03811       136 MGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSA  213 (608)
T ss_pred             hCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhcc
Confidence            88753  33457888888877655543210                                                  


Q ss_pred             --C------CeEEeeCCCCCCcHHHHhhcCCE---EEEEeccCCCCcccChHHHHHhhcC----C-cc-EEEEeCCCCcc
Q 014769          131 --G------ANVLLPRPGWPYYEGIAQRKQVE---VRHFDLLPERNWEVDLDAVEALADK----N-TA-AMVIINPGNPC  193 (419)
Q Consensus       131 --g------d~vlv~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~----~-~~-~v~i~~p~npt  193 (419)
                        |      .+++++.-.|+++...+..+|+.   ++.+|++  .++++|++.|++.+++    + +. +|+.+-.+..+
T Consensus       214 ~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~  291 (608)
T TIGR03811       214 RSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEE  291 (608)
T ss_pred             ccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCC
Confidence              0      05777787899999999999985   7778775  4578999999887753    2 22 34556667889


Q ss_pred             ccCCCHHHHHHHHHHHHhCCC--eEEEcccccccc---cCCC--CCCC----------------------------cccc
Q 014769          194 GNVFTYHHLQEIAEMARKLRV--MVVADEVYGHLT---FGSI--PYTP----------------------------MGLF  238 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~--~li~De~~~~~~---~~~~--~~~~----------------------------~~~~  238 (419)
                      |.+=|.+++.+|++.++++|+  ++++|.+|+++.   +-..  .+.+                            +..+
T Consensus       292 GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl  371 (608)
T TIGR03811       292 GAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI  371 (608)
T ss_pred             cccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC
Confidence            999885555555544478888  699999999853   1110  0000                            0111


Q ss_pred             CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc---------------cccCCch-----HHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS---------------IYSDIPT-----FIQG  298 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~-----~~~~  298 (419)
                      ... .-|++ .++|. +.-...+|.++.++..       +.+.+.....               +....+.     +..+
T Consensus       372 e~A-DSItv-DpHK~-g~~Py~~G~ll~Rd~~-------~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW  441 (608)
T TIGR03811       372 SEA-ESVTI-DPHKM-GYIPYSAGGIVIQDIR-------MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVW  441 (608)
T ss_pred             cCc-eEEEe-Ccccc-cccCCCeEEEEEeCHH-------HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHH
Confidence            111 12433 79998 6777889999988742       2222211110               0111121     2222


Q ss_pred             HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          299 AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       299 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      ++.+.+.. ..+.+.++.++..+.++++.+.|.++
T Consensus       442 ~~lr~l~~-G~~Gyg~~i~~~i~~A~~~~~~L~~~  475 (608)
T TIGR03811       442 AAHKVLPL-NVTGYGKLIGASIEGAHRFYDFLNNL  475 (608)
T ss_pred             HHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            22222211 35678888888889999999988773

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.40  E-value=4.7e-10  Score=99.03  Aligned_cols=360  Identities=12%  Similarity=0.072  Sum_probs=213.4

Q ss_pred             CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHH
Q 014769           20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAI   93 (419)
Q Consensus        20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~i   93 (419)
                      .....+.+|++.-.++.  ..+-.+|   -..     + -.+.++.+++-..+.+....      .|+..+-+.+++...
T Consensus        23 ~~DPev~~ii~~Ek~RQ--~~gieLI---aSE-----N-Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LC   91 (477)
T KOG2467|consen   23 EVDPEVHDIIEKEKERQ--KRGIELI---ASE-----N-FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLC   91 (477)
T ss_pred             hcChHHHHHHHHHHHhh--hcceeEe---ecc-----c-chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHH
Confidence            34567788887544332  1233333   221     1 24567777777666553222      344333333333333


Q ss_pred             HHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEee---CCCCCCcHHHH--hhcC-----CEEEEEeccC
Q 014769           94 ADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLP---RPGWPYYEGIA--QRKQ-----VEVRHFDLLP  162 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~---~p~~~~~~~~~--~~~g-----~~~~~~~~~~  162 (419)
                      .+.-.+-++.....-.| +-.-+++-|++.+..+++.|+++|.-.   +.+|-.+....  +...     ++-.++.+++
T Consensus        92 q~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~  171 (477)
T KOG2467|consen   92 QKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP  171 (477)
T ss_pred             HHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC
Confidence            33332333332222233 234466788889999999999999844   33443322111  1111     1222344555


Q ss_pred             CCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCC
Q 014769          163 ERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGS  240 (419)
Q Consensus       163 ~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~  240 (419)
                      ..+ -+|.|.|++.... ++++ +|+..+. -...++   -.++.++|.+.|.+++.|.+|-- +.-.+.-+.|+. +  
T Consensus       172 ~TG-~IDYD~Le~~A~~frPk~-iiaG~Sa-Y~R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe-y--  242 (477)
T KOG2467|consen  172 STG-YIDYDKLEKTATLFRPKL-IIAGTSA-YSRLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE-Y--  242 (477)
T ss_pred             CCC-ceehHHHHHHHHhcCCcE-EEecccc-chhhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc-c--
Confidence            443 5899999886554 3444 4443221 223344   57777888899999999999954 333333333322 1  


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCC---------C-ccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccc
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPN---------G-IFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~---------~-~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~  308 (419)
                        ..|+..+.+|+  +.|.|.|.+..+.--         . .+   ++-+++....  .+-++|......+++.+|.+-.
T Consensus       243 --~DiVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g~~i~y---dlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~  315 (477)
T KOG2467|consen  243 --CDIVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQGKEILY---DLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM  315 (477)
T ss_pred             --cceeecccccc--ccCCcceeEEEeccCCcCCCCCCCccee---chhhhhhhhccccccCCCCcchHHHHHHHHHhhC
Confidence              23888899997  789999998876511         1 22   3445555432  3345666667777777887766


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--
Q 014769          309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--  386 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--  386 (419)
                      ...+.+...++.++...+.+.|.+. |...+........+++++.....     +-..+++.++..+|.+.--..++.  
T Consensus       316 tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G~-----dGarvE~vle~~~I~~NKNtvpGD~S  389 (477)
T KOG2467|consen  316 TPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKGV-----DGARVEKVLELCHIALNKNTVPGDKS  389 (477)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccCC-----chHHHHHHHHHhhhhhcCCcCCCCcc
Confidence            6677888889999999999999988 77756555556677777765432     334457777777887654444443  


Q ss_pred             ---CCeEEEEe-e-----cCHHHHHHHHHHHHHHH
Q 014769          387 ---KNWLRIAF-C-----AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       387 ---~~~~Ris~-~-----~~~~~l~~~l~~l~~~~  412 (419)
                         ++.+||.. +     ..++|+++..+-|.+++
T Consensus       390 al~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av  424 (477)
T KOG2467|consen  390 ALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV  424 (477)
T ss_pred             ccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence               68899987 2     24688888777777665

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.37  E-value=8.6e-12  Score=100.53  Aligned_cols=119  Identities=21%  Similarity=0.348  Sum_probs=85.1

Q ss_pred             hCCchhHHHHHHHHHHh-hhc-CCCCCeeeccCCCCC-------------CCCCCCChHHHHHHHHHHHhCCCCCCCCCC
Q 014769           19 AAPAVTVKTSLASIIDS-VNK-NDPRPVVPLGYGDPT-------------AFPCFRTAVEAEDAIVDAVRSGKFNCYATN   83 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~-~~~-~~~~~~i~l~~g~~~-------------~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~   83 (419)
                      -.+.+.....-+...++ +.. ..+..+|+|+.....             ..+.+..++.+++++.+.      ..|.+.
T Consensus        18 ~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~   91 (153)
T PLN02994         18 HGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDY   91 (153)
T ss_pred             CCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCC
Confidence            34445555544433332 211 224458888776321             012344445545555442      248889


Q ss_pred             CCCHHHHHHHHHHHHhhCC--CCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769           84 SGIPPARRAIADYLSRDLP--YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY  143 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~  143 (419)
                      .|.++||+++++|+.+.+|  ..+++++|++|+|++++++.++.+++++||.|++++|+|++
T Consensus        92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~  153 (153)
T PLN02994         92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA  153 (153)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence            9999999999999999888  67889999999999999999999999999999999999974

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=99.34  E-value=1.8e-09  Score=98.54  Aligned_cols=314  Identities=14%  Similarity=0.128  Sum_probs=197.7

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc----C-CC---CeEEeeCCCCCCcHHHHhhcCCEE
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA----R-PG---ANVLLPRPGWPYYEGIAQRKQVEV  155 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~----~-~g---d~vlv~~p~~~~~~~~~~~~g~~~  155 (419)
                      .+...+..++.+++...++.+ ....=..|.|+|+++........    . +|   ..++++...+-.+...+...++.+
T Consensus       116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l  194 (491)
T KOG1383|consen  116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL  194 (491)
T ss_pred             chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence            466788888888888866655 22333678888998555544431    1 22   345666666777788888889999


Q ss_pred             EEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh-CCCeEEEcccccccccC-CCCCC
Q 014769          156 RHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK-LRVMVVADEVYGHLTFG-SIPYT  233 (419)
Q Consensus       156 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~-~~~~~  233 (419)
                      ..+++++ .++.+|+..+.+.+++++..++..-|+.|+|..=+   +++|.++..+ +++.+.+|.+-+.|... +....
T Consensus       195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~  270 (491)
T KOG1383|consen  195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE  270 (491)
T ss_pred             Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence            9999876 57899999999999999999999999999998755   8888888888 99999999999988752 11111


Q ss_pred             CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc----hhhHHHHHHhhhcccc-CC--chHHHHHHHHHHcc
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ----KSGIIDSIKDCLSIYS-DI--PTFIQGAIPQILEK  306 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~~~~~~l~~~~~~~~-~~--~~~~~~a~~~~l~~  306 (419)
                      .-..+....-.=.-.+.+|. |+.--.+||++-++.+.+..    ..+....+.......+ .+  ...+|++  +++..
T Consensus       271 ~~fdFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa--~~~~l  347 (491)
T KOG1383|consen  271 EEFDFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWA--ALMSL  347 (491)
T ss_pred             cccccCCCCceeEeecccee-eeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHH--HHHHh
Confidence            01112211111222345675 77666699998877542220    0000001100001111 11  1222333  33333


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          307 TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                       ..+.+.+..+.+.+....+++.+++++++..+..|.-++.++   ....    .+..++ ..+++++|..+.. ..|  
T Consensus       348 -G~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~---~s~~----~~i~el-sd~l~~~GW~lna-lq~--  415 (491)
T KOG1383|consen  348 -GEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILF---GSND----VNIFEL-SDLLRKKGWILNA-LQF--  415 (491)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEc---cCCc----cchhhh-hHHHHhcCcCccc-cCC--
Confidence             356777778889999999999999988888665555443332   2211    133444 4455888987743 332  


Q ss_pred             CCeEEEEe---ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          387 KNWLRIAF---CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       387 ~~~~Ris~---~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +..+-+++   .+.++-.++++..|+++++++.+
T Consensus       416 P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~  449 (491)
T KOG1383|consen  416 PAAIHICVTRVHAREDVADRFVADIRKVVEELKS  449 (491)
T ss_pred             CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence            33444554   23455567888888888887643

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.34  E-value=8.7e-10  Score=96.04  Aligned_cols=293  Identities=14%  Similarity=0.111  Sum_probs=184.8

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCc-----HHHHhhcCCEEEEEec
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYY-----EGIAQRKQVEVRHFDL  160 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~-----~~~~~~~g~~~~~~~~  160 (419)
                      .+-..++-.+      +..+.+++++.+++-.++.++.+..+  +|++|++++-.-++.     ...+...+..   +++
T Consensus        80 ~lgdklApLi------GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~  150 (407)
T COG3844          80 RLGDKLAPLI------GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL  150 (407)
T ss_pred             HHHHHhhhhh------cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc
Confidence            3444455544      57889999999999999988888654  589999887544332     2233333332   111


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                          ...+.++++++++++++.+|++++.+.-||+.++   +.+|.+++++++++++.|-+|+...    -+..+...+.
T Consensus       151 ----~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGa----vp~~Lh~~ga  219 (407)
T COG3844         151 ----EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGA----VPVDLHAAGA  219 (407)
T ss_pred             ----eeeeChHHHHHhhccceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCC----cceeecccCC
Confidence                1235677899999988888999999999999999   9999999999999999999999733    2333333343


Q ss_pred             CCcEEEEecCCCcCCC-CCceeEEEEeeCCCCcc----------chh-hHHHHHHhh---h-ccccCCchHHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIF----------QKS-GIIDSIKDC---L-SIYSDIPTFIQGAIPQIL  304 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~----------~~~-~~~~~l~~~---~-~~~~~~~~~~~~a~~~~l  304 (419)
                      +   +-|+|..|.+.. ||-..|..+.++.....          .++ ...+.+...   . ...++++..+..++...|
T Consensus       220 D---faigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aL  296 (407)
T COG3844         220 D---FAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGAL  296 (407)
T ss_pred             C---eeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhh
Confidence            3   888899998644 45444444443321111          000 000000000   0 112344455555655555


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhhcC-C--CCCCCCCCC----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeE
Q 014769          305 EKTKEDFFCKLIDTLRESAEICYDGVKEI-P--CISCPNKPE----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVI  377 (419)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~  377 (419)
                      +-...-.+.+.+++--...+++.+.++.. +  +++.+ .|.    .|-.+.+..|        ...+++..| .++||.
T Consensus       297 Difa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~-tPr~~~~rGsqvS~~hp--------~~~~V~qaL-i~rGVi  366 (407)
T COG3844         297 DIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLV-TPRAHEERGSQVSLYHP--------HGYQVMQAL-IDRGVI  366 (407)
T ss_pred             hhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEe-ccchhhhccceeeEecC--------cHHHHHHHH-HHcCcc
Confidence            54333336666666666777777777653 2  34422 443    2445555555        345555555 778996


Q ss_pred             eecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHhc
Q 014769          378 VTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       378 v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .    .|..++.+|+.+.   .+-+++-.+++.|.+++.+..-
T Consensus       367 g----D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a~  405 (407)
T COG3844         367 G----DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLAW  405 (407)
T ss_pred             c----cccCCCeeeecCccceechhHHHHHHHHHHHHHHhhcc
Confidence            3    2445789999995   4679999999999999987654

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.32  E-value=1.7e-09  Score=97.87  Aligned_cols=315  Identities=18%  Similarity=0.132  Sum_probs=195.6

Q ss_pred             CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc-ccHHHHHHHHHHHh----cCCC----CeEEeeCCCCCCcHHHHhhcCC
Q 014769           83 NSGIPPARRAIADYLSRDLPYKLSADDVYVT-LGCKQAVEVILSVL----ARPG----ANVLLPRPGWPYYEGIAQRKQV  153 (419)
Q Consensus        83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t-~g~~~al~~~~~~l----~~~g----d~vlv~~p~~~~~~~~~~~~g~  153 (419)
                      .+|+.++...+.+||.+.-|+    +.|-+. +.+.++=...+..+    ...|    +.+++|+..|..-...+.+.|.
T Consensus       104 vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~  179 (496)
T COG1003         104 VQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGF  179 (496)
T ss_pred             HHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCc
Confidence            578999999999999875443    455443 22233333322222    2233    6899999999988899999999


Q ss_pred             EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769          154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT  233 (419)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  233 (419)
                      +++.++.+.+  ..+|+++|+.++.+++.++.|++|+. -|  +=++.+.+|+++.+++|..+..|.+=-.-..+-..+ 
T Consensus       180 ~VV~V~~~~~--G~VDlddLk~k~~~~~AalMiTnPsT-~G--vFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP-  253 (496)
T COG1003         180 KVVVVKCDEN--GNVDLDDLRAKAEDNLAALMITNPST-LG--VFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARP-  253 (496)
T ss_pred             eEEEEecCCC--CCccHHHHHHHhccceeEEEeccCcc-cc--cchhhHHHHHHHHHHcCCEEEecCcchhhhhccccc-
Confidence            9999998654  46999999999998899999998875 23  335679999999999999999998765433332111 


Q ss_pred             CccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC-Cccchh----hHHH-HHH---h-h--hccccCCchHHH
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN-GIFQKS----GIID-SIK---D-C--LSIYSDIPTFIQ  297 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~-~~~~~~----~~~~-~l~---~-~--~~~~~~~~~~~~  297 (419)
                        ..++.+  ++.+ -++|+|..|    |...|=+.++..- ...-.|    +..+ .+.   . .  ....+..|....
T Consensus       254 --Gd~G~D--V~Hl-NLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il  328 (496)
T COG1003         254 --GDMGFD--VVHL-NLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASIL  328 (496)
T ss_pred             --cccccc--eEEe-ecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHH
Confidence              122222  3333 477776543    5667777664310 000000    0000 000   0 0  000111222233


Q ss_pred             HHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcC
Q 014769          298 GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEES  375 (419)
Q Consensus       298 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  375 (419)
                      ..+..++.....+.++...+..--+.+++..+|+..  +.+...+.  ...-+.+..............+++++| .++|
T Consensus       329 ~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrL-lD~G  405 (496)
T COG1003         329 PIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRL-LDYG  405 (496)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHH-HhcC
Confidence            333334443345778888888888899999999862  22222333  233334444322222223577888888 5689


Q ss_pred             eEeecCCCCC--CCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          376 VIVTPGIYVG--LKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       376 v~v~~g~~~~--~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +.- |-.+|-  ..+.+-|=+.  .+.++||+.++.+.++.++..
T Consensus       406 fHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~  449 (496)
T COG1003         406 FHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEAD  449 (496)
T ss_pred             CCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            975 555565  5788888874  467999999999998887654

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.24  E-value=2.5e-08  Score=101.63  Aligned_cols=305  Identities=13%  Similarity=0.162  Sum_probs=180.7

Q ss_pred             ChHHHHHHHHHHHhCCCCCCCCCC-----CCC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc--
Q 014769           60 TAVEAEDAIVDAVRSGKFNCYATN-----SGI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA--  128 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~--  128 (419)
                      .|+.+.+.+.+.  ...++.|.|.     +|.    -++.+.++++.      +.+..|.-+..+++++.+.++.+..  
T Consensus        78 ~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~~~  149 (939)
T TIGR00461        78 LPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFNVS  149 (939)
T ss_pred             CChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHHhh
Confidence            456665454432  1224556553     333    34555566665      6777888888999998887777642  


Q ss_pred             -CCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769          129 -RPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ  203 (419)
Q Consensus       129 -~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  203 (419)
                       +++++|++++-.|+.+...+    +..|++++.++          +++|+..+  ++..+++.+|+. .|.+-+   ++
T Consensus       150 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--~~~~v~~q~Pn~-~G~ied---~~  213 (939)
T TIGR00461       150 KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--DVFGCLLQYPAT-DGSILD---YK  213 (939)
T ss_pred             cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--CEEEEEEECCCC-CeEEec---HH
Confidence             23489999999998766444    47788877653          34555544  456667778876 788865   99


Q ss_pred             HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC------Ccc
Q 014769          204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN------GIF  273 (419)
Q Consensus       204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~------~~~  273 (419)
                      +|.++++++|.+++++.-...+.    ...+...++.|   |++++ +|.||.|    |.-.|++.+++.-      ++.
T Consensus       214 ~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaD---i~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgriv  285 (939)
T TIGR00461       214 QLIDALHSHKSLVSVAADLMALT----LLTPPGHYGAD---IVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIV  285 (939)
T ss_pred             HHHHHHHHcCCEEEEEechHHhC----CcCCHHHcCCc---EEeeC-CCccCCCCCCCCCceeeeeecHhhHhhCCCCce
Confidence            99999999999999853222211    11222344444   55654 3444542    5558888776520      000


Q ss_pred             ---chhh----HH-------HHHHhhhcccc--CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          274 ---QKSG----II-------DSIKDCLSIYS--DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       274 ---~~~~----~~-------~~l~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                         .+.+    +.       +.++....+++  +...+...++..++.....+.+++..++...+..++.+.|.+. |++
T Consensus       286 G~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~  364 (939)
T TIGR00461       286 GVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHE  364 (939)
T ss_pred             eEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCc
Confidence               0000    00       01111111111  1111112222223343446889999999999999999999985 887


Q ss_pred             CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769          338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK  409 (419)
Q Consensus       338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~  409 (419)
                      .+ .+  .+|-.+.+...   + .+..++..++ .++||.+...    .++.+++|+  ..++++|+.+++.+.
T Consensus       365 ~~-~~--~fF~~~~v~~~---~-~~~~~i~~~~-~~~gi~l~~~----~~~~i~~s~~E~~t~~di~~l~~~~~  426 (939)
T TIGR00461       365 LI-NK--TWFDTLTVKVG---N-GISSELLKAA-EEFNINLRAV----DTTTVGIALDETTTKADVENLLKVFD  426 (939)
T ss_pred             cc-CC--CccceEEEEeC---C-CCHHHHHHHH-HHCCCeeeec----CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence            44 33  33433323210   0 1456666666 5679987652    246899999  468899999999884

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.15  E-value=1.2e-08  Score=92.92  Aligned_cols=223  Identities=19%  Similarity=0.137  Sum_probs=151.0

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHH-HHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEE--
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPAR-RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL--  135 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl--  135 (419)
                      .+++++++++.+.+....-..|.-..|...-| ..+++.+.   + ....+.++++++.+.++..+..++..+...|+  
T Consensus        38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~  113 (395)
T COG1921          38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSR  113 (395)
T ss_pred             cCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHh---c-ccchhheeeECCcHHHHHHHHhhhccCCeEEEEc
Confidence            46788889999888754322444333332222 23344332   2 34578899999999999999999987444443  


Q ss_pred             ---eeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc-cccCCCHHHHHHHHHHHHh
Q 014769          136 ---LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP-CGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       136 ---v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np-tG~~~~~~~l~~i~~~~~~  211 (419)
                         ++ +..+.+.+.++..|.+.+.+.-.    ......+++.++.+++.+++-++-+|- .--.++   +++++++|++
T Consensus       114 g~lV~-gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~  185 (395)
T COG1921         114 GELVE-GGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTALLLKVHSSNYGFTGMLS---EEELVEIAHE  185 (395)
T ss_pred             ccccc-CCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCeeEEEEeecccccccccc---HHHHHHHHHH
Confidence               33 57778899999999998877532    135678899999999988876655542 222355   7789999999


Q ss_pred             CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-cccc
Q 014769          212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYS  290 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~  290 (419)
                      +|+++++|.+.+...............+.+   +++.|-.|.  +.|.+.|.++++.        +++++++... ....
T Consensus       186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKl--lgGPqaGii~GkK--------elI~~lq~~~l~Ral  252 (395)
T COG1921         186 KGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKL--LGGPQAGIIVGKK--------ELIEKLQSHPLKRAL  252 (395)
T ss_pred             cCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchh--cCCCccceEechH--------HHHHHHHhhhhhhhh
Confidence            999999999887654321122222233333   788899998  5677799999976        7898888763 3334


Q ss_pred             CCchHHHHHHHHHHcc
Q 014769          291 DIPTFIQGAIPQILEK  306 (419)
Q Consensus       291 ~~~~~~~~a~~~~l~~  306 (419)
                      .......+++.++|+.
T Consensus       253 rv~K~tla~l~~aLe~  268 (395)
T COG1921         253 RVDKETLAALEAALEL  268 (395)
T ss_pred             hcCcHhHHHHHHHHHH
Confidence            5556666666666665

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.05  E-value=1.3e-08  Score=90.85  Aligned_cols=175  Identities=19%  Similarity=0.287  Sum_probs=109.5

Q ss_pred             HHHHHHHHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCCeEEeeC-CCCCCcHH----------HHhhcCCE
Q 014769           89 ARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGANVLLPR-PGWPYYEG----------IAQRKQVE  154 (419)
Q Consensus        89 lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd~vlv~~-p~~~~~~~----------~~~~~g~~  154 (419)
                      =|+.+-+.+.+.+|    .+..++   .-++|+|+..++..+++|||+++... .-|.....          .++.+|+.
T Consensus        55 GRd~le~iyA~vfg----aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~  130 (403)
T PF06838_consen   55 GRDKLERIYADVFG----AEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIK  130 (403)
T ss_dssp             HHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-E
T ss_pred             cHHHHHHHHHHHhC----chhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCce
Confidence            45555555544444    344444   35789999999999999999998553 33433322          33566788


Q ss_pred             EEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC-CCccccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCCCC
Q 014769          155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIP  231 (419)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~  231 (419)
                      ...+++.++  ..+|.+.+++++++++++|+|..- ..-+=..++.++++++++++++.  ++++++|.+|++|.-..++
T Consensus       131 Y~~v~L~~d--g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP  208 (403)
T PF06838_consen  131 YREVPLTED--GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEP  208 (403)
T ss_dssp             EEE--B-TT--SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G
T ss_pred             eEEEeecCC--CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCc
Confidence            888887643  469999999999988999988744 33333458999999999998875  7899999999998743222


Q ss_pred             CCCccccCCCCcEEEEecCCCcCCCCCc--eeEEEEeeCCCCccchhhHHHHHHhh
Q 014769          232 YTPMGLFGSIVPVITLGSISKRWLVPGW--RFGWLVTNDPNGIFQKSGIIDSIKDC  285 (419)
Q Consensus       232 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~~~~~~~~~~~~~~~~~~~l~~~  285 (419)
                          ..++.+   ++.+|+-|..| .|+  --||++++.        ++++.....
T Consensus       209 ----~~vGAD---l~aGSLIKNpG-GgiAptGGYIaGr~--------~lVe~~a~R  248 (403)
T PF06838_consen  209 ----TEVGAD---LMAGSLIKNPG-GGIAPTGGYIAGRK--------DLVERAAYR  248 (403)
T ss_dssp             ----GGGT-S---EEEEETTSGGG-TTT-SS-EEEEESH--------HHHHHHHHH
T ss_pred             ----cccchh---heeccceeCCC-CCccCcCCEEechH--------HHHHHHHhh
Confidence                234444   89999999944 332  259999876        688776654

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.04  E-value=1.1e-07  Score=88.92  Aligned_cols=281  Identities=16%  Similarity=0.193  Sum_probs=144.8

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---CCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEec
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA---RPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL  160 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~  160 (419)
                      ++..-|++..      +.+..+.-+-.+++++-+.++.+..   ++.++|+++.-.|+.+..    .+...|++++.++.
T Consensus       114 e~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~  187 (429)
T PF02347_consen  114 EYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL  187 (429)
T ss_dssp             HHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B
T ss_pred             HHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc
Confidence            4555555555      4555566677777777776666542   334699999999998766    44556888888876


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      +...  ..|        ++++.+|++.+||. .|.+-+   +++|.++++++|.++++ .+-- .....  ..+...++.
T Consensus       188 ~~~~--~~d--------~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL~~--l~~Pge~GA  249 (429)
T PF02347_consen  188 DEDG--TTD--------DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NALGG--LKSPGEYGA  249 (429)
T ss_dssp             BTTC--SB---------STTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGCCT--C--GGGGT-
T ss_pred             cccC--Ccc--------ccCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHHhC--cCChhhcCc
Confidence            5432  223        45788999999987 788766   99999999999998876 3221 12221  122234555


Q ss_pred             CCcEEEEecCCCcCCCC----CceeEEEEeeCCC------Ccc---ch----h-------hHHHHHHhhhccc--cCCch
Q 014769          241 IVPVITLGSISKRWLVP----GWRFGWLVTNDPN------GIF---QK----S-------GIIDSIKDCLSIY--SDIPT  294 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~------~~~---~~----~-------~~~~~l~~~~~~~--~~~~~  294 (419)
                      |   |++++ +|.||.|    |..+|++.+++.-      ++.   .+    .       .--+.++....++  .+...
T Consensus       250 D---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqa  325 (429)
T PF02347_consen  250 D---IVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQA  325 (429)
T ss_dssp             S---EEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-H
T ss_pred             c---EEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHH
Confidence            4   66765 7887754    6779999887630      000   00    0       0001222222111  12222


Q ss_pred             HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769          295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE  374 (419)
Q Consensus       295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  374 (419)
                      +...++..++.....+.+++..++...+.+++.+.|+++.+.. +  ....+|-++....       .. ..+.+++ ++
T Consensus       326 L~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~--~~~~f~e~v~~~~-------~~-~~~~~l~-~~  393 (429)
T PF02347_consen  326 LLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-F--DNPFFFEFVVVFS-------KD-KEVEELL-KR  393 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-S--SSSSBSSEEEEES-------S--HHHHHHH-HT
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c--CCCCceeeeeecC-------Cc-HHHHHHH-HH
Confidence            3333344444444578999999999999999999999863333 2  2222322222211       11 1222332 22


Q ss_pred             CeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHH
Q 014769          375 SVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRM  408 (419)
Q Consensus       375 gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l  408 (419)
                      ++.---+..+...+++-+++.  .++++|+.+++.+
T Consensus       394 ~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  394 GIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             T----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred             HHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence            332111111122457888884  5789999988754

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=99.01  E-value=2e-07  Score=85.25  Aligned_cols=321  Identities=13%  Similarity=0.067  Sum_probs=180.2

Q ss_pred             CCCCHHHHHHHHHHHHhhCCCC-------CCCCcEEEcccHHHHHHHHHHHhc-C------CC-----------C-eEEe
Q 014769           83 NSGIPPARRAIADYLSRDLPYK-------LSADDVYVTLGCKQAVEVILSVLA-R------PG-----------A-NVLL  136 (419)
Q Consensus        83 ~~g~~~lr~~ia~~l~~~~~~~-------~~~~~i~~t~g~~~al~~~~~~l~-~------~g-----------d-~vlv  136 (419)
                      ++-..+|+..+.+|+.+..+.+       .....=++-.+++++...++.+.. +      .+           + .+..
T Consensus       108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~  187 (511)
T KOG0628|consen  108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC  187 (511)
T ss_pred             CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence            4567899999999998866543       122222344444555444444331 1      11           1 3446


Q ss_pred             eCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-----ccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          137 PRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-----TAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       137 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      .+.++.+....+...|++.+.++.+.  +++++.+.|++++.++     .+.+++.+.. -||. -.-+++.+|..+|++
T Consensus       188 SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~-ca~D~l~elg~Vc~~  263 (511)
T KOG0628|consen  188 SDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSS-CAFDELEELGPVCRE  263 (511)
T ss_pred             cCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEeec-Cccc-cccccHHHhcchhhh
Confidence            67788888888888899988888654  8899999999988652     2233333332 1333 344679999999999


Q ss_pred             CCCeEEEcccccccccCCCCCCCccc-cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc----chhhHHH-HHHh-
Q 014769          212 LRVMVVADEVYGHLTFGSIPYTPMGL-FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF----QKSGIID-SIKD-  284 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~----~~~~~~~-~l~~-  284 (419)
                      +++|+.+|.+|++..+..+.+..+.. ++..+  =+....||+ ++--+-+.-+..++...+.    -+|...+ ..+. 
T Consensus       264 ~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~  340 (511)
T KOG0628|consen  264 EGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD--SFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS  340 (511)
T ss_pred             cCEEEEeehhhccccccCHHHHHHhhcchhhc--cccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcchhhcc
Confidence            99999999999976655433322211 11111  111234555 3433444444443321100    0000110 0000 


Q ss_pred             hhccccCCchHHH--HHHHHH--HcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          285 CLSIYSDIPTFIQ--GAIPQI--LEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       285 ~~~~~~~~~~~~~--~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      ...+-...-+.++  .++...  ++...-+.+++..++..+..+.+...+.+-+.++.+.+..=|+. .+++...+    
T Consensus       341 ~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLv-cFRlk~~N----  415 (511)
T KOG0628|consen  341 APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLV-CFRLKGDN----  415 (511)
T ss_pred             CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccccccee-EEeecCCc----
Confidence            0011000011111  111111  12212245555555666666666666666667874434444544 45665432    


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .....+..++-....|.+.|.+. ...-.+|++++   +++++++++-+.|.+...++.
T Consensus       416 ~~ne~Ll~~in~~g~i~l~~~~l-~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~  473 (511)
T KOG0628|consen  416 EINEALLNRLNSSGRIHLVPASL-HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF  473 (511)
T ss_pred             HHHHHHHHHHHhcCcEEEEEeee-cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            24567888887778888888653 22346899984   578999999999998887754

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=98.98  E-value=4e-07  Score=81.50  Aligned_cols=332  Identities=14%  Similarity=0.078  Sum_probs=184.7

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC-----C-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA-----T-NSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~-----~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +.+.||+.| |+     ..++++++...+-+.+..-.+++     . .+-...+-+...+.+.+.++++-+-+-+++-.|
T Consensus         4 ~~~~nFsaG-Pa-----~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG   77 (365)
T COG1932           4 PRVYNFSAG-PA-----ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG   77 (365)
T ss_pred             CCCCCCCCC-cc-----cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence            446789888 32     23555555555444331111111     1 112234444444445555565544445566677


Q ss_pred             HHHHHHHHHHHhcCCCCeEEeeCCCCCCc-HHHHhhcCCEEEEEecc-CCC--CcccChHHHHHhhcCCccEEEEeCCCC
Q 014769          116 CKQAVEVILSVLARPGANVLLPRPGWPYY-EGIAQRKQVEVRHFDLL-PER--NWEVDLDAVEALADKNTAAMVIINPGN  191 (419)
Q Consensus       116 ~~~al~~~~~~l~~~gd~vlv~~p~~~~~-~~~~~~~g~~~~~~~~~-~~~--~~~~~~~~l~~~~~~~~~~v~i~~p~n  191 (419)
                      +|..+..+...|..+...-.+....|... ...++..+..+...... ...  +.-++++.+.  +.++...|.+|+-..
T Consensus        78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeT  155 (365)
T COG1932          78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNET  155 (365)
T ss_pred             cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCc
Confidence            89999999999886544313334444332 22334444322211111 111  2234444333  222333366665555


Q ss_pred             ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      -+|+.++  +...+.     .+.++|.|.....+.    ...++..++     ++..+..|.+|..|  ++.++.++   
T Consensus       156 i~Gv~v~--~~p~~~-----~~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~---  214 (365)
T COG1932         156 ISGVEVP--ELPDIG-----SDGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP---  214 (365)
T ss_pred             ccceEcc--CCCCCC-----CCceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH---
Confidence            6787765  111111     127888887766533    222333332     55668999998888  88888865   


Q ss_pred             ccchhhHHHHHHhh--------------hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769          272 IFQKSGIIDSIKDC--------------LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCI  336 (419)
Q Consensus       272 ~~~~~~~~~~l~~~--------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~  336 (419)
                           ++++++...              .++..+|+..+.+.+..+++... ...++.+.++-+++.+.+++.+.+-+-.
T Consensus       215 -----~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy  289 (365)
T COG1932         215 -----DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFY  289 (365)
T ss_pred             -----HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence                 344433321              12346777777777776666533 3567888888899999999999875211


Q ss_pred             CCCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          337 SCPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       337 ~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                      .....+  .+-+-+.+++.+..     -+..|+.++ +++|+...-|.  ...+.+|+++  +.+.|+++.+++-++.+.
T Consensus       290 ~~~v~~~~RS~mnV~f~~~~~~-----ld~~fv~ea-e~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~fm~~f~  361 (365)
T COG1932         290 RNLVAKANRSRMNVTFTLVDAE-----LDKGFVAEA-EAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTDFMDWFE  361 (365)
T ss_pred             ccccchhhccceeEEEEcCcHH-----HHHHHHHHH-HHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHHHHHHHH
Confidence            111122  23455556665321     245666666 55677776662  2345699999  458899999999988887


Q ss_pred             HHH
Q 014769          413 QRH  415 (419)
Q Consensus       413 ~~~  415 (419)
                      +++
T Consensus       362 ~~~  364 (365)
T COG1932         362 ETY  364 (365)
T ss_pred             Hhh
Confidence            764

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.96  E-value=1.1e-06  Score=78.03  Aligned_cols=312  Identities=17%  Similarity=0.205  Sum_probs=194.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-----CCCeEEeeCCCCCCc-HHHHhhcC
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-----PGANVLLPRPGWPYY-EGIAQRKQ  152 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-----~gd~vlv~~p~~~~~-~~~~~~~g  152 (419)
                      .|+.+.++..|.+++.+.+      +  -+.++-|+-+..|-++++..+++     ||.+..+++..|+.. ..-.+..|
T Consensus        74 AYagsrs~~~L~~avkdif------G--fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng  145 (471)
T COG3033          74 AYAGSRSYYALADAVKDIF------G--FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING  145 (471)
T ss_pred             hhcccccHHHHHHHHHHhc------C--ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence            6888889999999999987      2  36778899999998888888766     455556666666643 34445567


Q ss_pred             CEEEEEeccCCCC--------cccChHHHHHhhcC----CccEEEEe-CCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          153 VEVRHFDLLPERN--------WEVDLDAVEALADK----NTAAMVII-NPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       153 ~~~~~~~~~~~~~--------~~~~~~~l~~~~~~----~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      ..++-++++...+        ..+|++.|++.+++    +.+.|+++ +.|.-.|+..|.+.+++..++|++|++.++.|
T Consensus       146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D  225 (471)
T COG3033         146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD  225 (471)
T ss_pred             CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence            6666665543211        35789999998865    33444433 44557789999999999999999999999999


Q ss_pred             cccc-cccc---CCC---CCCCcc-------ccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHh
Q 014769          220 EVYG-HLTF---GSI---PYTPMG-------LFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKD  284 (419)
Q Consensus       220 e~~~-~~~~---~~~---~~~~~~-------~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~  284 (419)
                      .+-. +-.|   ..+   ...++.       ++.+ .  +++ |.-|- ++.-  + |+++.++ +..+   ++...++.
T Consensus       226 a~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD-~--~~m-S~KKD-~lvn--mGGfl~~~D-~~~f---Dvy~~~~~  294 (471)
T COG3033         226 AARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD-G--CTM-SAKKD-GLVN--MGGFLCFKD-DSFF---DVYEECRT  294 (471)
T ss_pred             hhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh-h--hee-ecccc-ceec--cccEEEecC-ccHH---HHHHHHHh
Confidence            8642 1111   100   011111       1111 1  222 55565 4432  3 5665554 2222   34455554


Q ss_pred             hh------ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          285 CL------SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       285 ~~------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      ..      ...++.+.-...+++.-|.+.. .+|+..+..+++    +|.+.|.+. |+. +..|.||.-++++....-.
T Consensus       295 ~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~----YL~~~l~~~-GVp-i~~paGGHavfvda~~~lp  368 (471)
T COG3033         295 LVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQ----YLADGLEEA-GVP-IVQPAGGHAVFVDAGKFLP  368 (471)
T ss_pred             heEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHH----HHHHHHHhc-CCe-eEecCCCceEEeehhhhcC
Confidence            32      1223334334455555555433 577777666655    556666665 776 4488888888876533110


Q ss_pred             ---cCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------CCeEEEEee---cCHHHHHHHHHHHHHHHHHH
Q 014769          358 ---EDINDDIEFALKLAKEESVIVTPGIYVGL-------------KNWLRIAFC---AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       358 ---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~  415 (419)
                         +..-.+..++-+|.++.||...--..|..             -.-+|+++-   -+.+.++..++.++++.+.-
T Consensus       369 hip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~  445 (471)
T COG3033         369 HIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA  445 (471)
T ss_pred             CCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence               11124677888899999998764444421             146999992   47899999999998877653

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.86  E-value=1e-05  Score=73.98  Aligned_cols=312  Identities=16%  Similarity=0.154  Sum_probs=175.4

Q ss_pred             ChHHHHHHHHHHHhCCCCCCCCCC-----CCC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc--
Q 014769           60 TAVEAEDAIVDAVRSGKFNCYATN-----SGI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA--  128 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~--  128 (419)
                      .|+.+.+.+.+.  ...++.|.|.     +|.    -++..-++++.      +++-.|.-+-.++|++-+.++.+..  
T Consensus        89 ~P~vI~rnile~--pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT------Gm~VANASm~DeaTAaAEAm~ma~r~~  160 (450)
T COG0403          89 TPPVILRNILEN--PEWYTAYTPYQPEISQGRLEALFEFQTLVADLT------GLDVANASMLDEATAAAEAMLMAKRVT  160 (450)
T ss_pred             CcHHHHHHhhcC--ccccccCCCCchhhhhHHHHHHHHHHHHHHHHh------CCCcccchhhhhHHHHHHHHHHHHHhh
Confidence            455554444332  2345566663     332    23344455554      5666677777788877777766653  


Q ss_pred             -CCCCeEEeeCCCCCCcHHHHh----hcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769          129 -RPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ  203 (419)
Q Consensus       129 -~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  203 (419)
                       .+..+++++.-+|+.+...++    -.|.++..++.+       |++.++.....++..+++..|+. .|.  ..++++
T Consensus       161 k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~vQyP~~-~G~--~~~d~~  230 (450)
T COG0403         161 KKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGDVFGVLVQYPNT-FGI--VEEDLR  230 (450)
T ss_pred             cCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccCeEEEEEecCCC-CCc--cchhHH
Confidence             235899999999998766554    335555555432       67777777333667888888875 562  234599


Q ss_pred             HHHHHHHhCCCeEEE--cccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC------C
Q 014769          204 EIAEMARKLRVMVVA--DEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN------G  271 (419)
Q Consensus       204 ~i~~~~~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~------~  271 (419)
                      ++.+.+++++.++++  |-.--.      -..+...++.+   |++++..-. |.|    |..+||+.++..-      +
T Consensus       231 ~l~~~~h~~~al~~v~aDplaL~------LL~pPGe~GAD---IvvG~~Qrf-GvPmgfGGPhag~fA~~~~~~R~mPGR  300 (450)
T COG0403         231 ALIEAAHSAGALVIVAADPLALG------LLKPPGEFGAD---IVVGSAQRF-GVPMGFGGPHAGYFAVKDEFKRQMPGR  300 (450)
T ss_pred             HHHHHHhhcCCEEEEEechhHhh------ccCCccccCCc---eEEecCccc-CCCcCCCCcceeeeeEhHhHhhcCCCc
Confidence            999999999987665  211111      11122344444   888887764 554    7889999987631      0


Q ss_pred             cc-------chhhHH-------HHHHhhhccc-cCCc-hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-
Q 014769          272 IF-------QKSGII-------DSIKDCLSIY-SDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP-  334 (419)
Q Consensus       272 ~~-------~~~~~~-------~~l~~~~~~~-~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-  334 (419)
                      +.       .++.+.       +.+|....++ -+.+ .+...++..++.....+.+.++..+..+...++.+.|++.. 
T Consensus       301 lVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~  380 (450)
T COG0403         301 LVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGA  380 (450)
T ss_pred             eeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            00       001111       1112111111 1111 11222222233334478899999999999999999999652 


Q ss_pred             CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHH
Q 014769          335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAF  411 (419)
Q Consensus       335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~  411 (419)
                      |++.+ ..  .+|-.+.+....    .....+..+. ...|+-+..-.    .+.+-+++  .+++++|+.+++.+...
T Consensus       381 g~~~~-~~--~fFdt~~v~~~~----~~~~~l~~~~-~~~G~~L~~~~----~~~~~ia~tEt~t~~~i~~l~~~~~~~  447 (450)
T COG0403         381 GVELV-FD--HFFDTFTVRVPE----EVAEALLAAA-IAGGINLRRVD----ADTVLIALTETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             ceEec-cc--cceeeEEEecch----hHHHHHHHHH-HhcCCceeeec----CCceEEEeecccCHHHHHHHHHHHhhh
Confidence            45522 22  444333332100    0122333333 34566554322    34666776  35689999888887654

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=98.80  E-value=1.4e-06  Score=77.06  Aligned_cols=215  Identities=13%  Similarity=0.086  Sum_probs=115.5

Q ss_pred             hHHHHHhhcC-----CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCC
Q 014769          170 LDAVEALADK-----NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSI  241 (419)
Q Consensus       170 ~~~l~~~~~~-----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~  241 (419)
                      ++++++.+..     .+.+.+|+.| +...|- ..|++.+++|.++|++|++.+|+||++.+..-+|.-.. .-..++..
T Consensus       255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P  334 (484)
T KOG1405|consen  255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP  334 (484)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence            4445554432     3566688888 555554 67999999999999999999999999998665553211 01112222


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                      ..++   +|||-+ ..|   ||..-  ++.+-+     +..+. .+ ++...+.-...+.++++....+.+-++.++.  
T Consensus       335 pD~v---TFSKK~-q~g---Gffh~--~~frpn-----~pYri-fN-TWmGdP~k~lll~~vv~~I~~~~Ll~n~~~v--  396 (484)
T KOG1405|consen  335 PDVV---TFSKKF-QTG---GFFHD--EEFRPN-----EPYRI-FN-TWMGDPSKNLLLEEVVQEIKREDLLNNVAHV--  396 (484)
T ss_pred             ccce---ehhhhh-hcC---ccccC--cccCCC-----chHHH-hh-hhcCChHHHHHHHHHHHHHhHHHHHHHHHHH--
Confidence            1223   799996 444   55533  211110     11111 12 2222333333344444443333333333332  


Q ss_pred             HHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--e
Q 014769          322 SAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--C  395 (419)
Q Consensus       322 ~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~  395 (419)
                       .+.+...|.    +.|+...- ....|-|+-+++|..      ...+..-..++-.||.+--+   + ...+|+-+  .
T Consensus       397 -G~~l~~gL~~Lq~~~p~~~~~-~RGrGTF~a~d~ps~------~~Rdk~i~~~~~nGv~~GGC---g-~~siRfRPsLv  464 (484)
T KOG1405|consen  397 -GKALLKGLLELQAKYPGKINN-LRGRGTFIAWDCPSG------SIRDKLILIARLNGVNLGGC---G-DKSIRFRPSLV  464 (484)
T ss_pred             -HHHHHHHHHHHHHhCchhhhc-ccccceEEEEeCCCh------HHHHHHHHHHHHcCceeccc---c-cceeeecccee
Confidence             333333332    35554312 233455666677753      22333334457788876332   2 34556655  4


Q ss_pred             cCHHHHHHHHHHHHHHHHH
Q 014769          396 AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       396 ~~~~~l~~~l~~l~~~~~~  414 (419)
                      ..+...+..++++.+.+..
T Consensus       465 f~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  465 FRKHHADIFLDIFDKILAG  483 (484)
T ss_pred             ehhhhHHHHHHHHHHHhcc
Confidence            5777888888888887754

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.76  E-value=3.1e-06  Score=77.42  Aligned_cols=290  Identities=15%  Similarity=0.099  Sum_probs=148.9

Q ss_pred             CcEEEcccHHHH-HHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC-CcccChHHHHHhhcC---C
Q 014769          108 DDVYVTLGCKQA-VEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALADK---N  180 (419)
Q Consensus       108 ~~i~~t~g~~~a-l~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~---~  180 (419)
                      ...++++-+|.- +.+.+.++.  ..++.|+.+.-.+......+...|++++.++..... ....|++.+++.+++   +
T Consensus        75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~  154 (389)
T PF05889_consen   75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD  154 (389)
T ss_dssp             CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred             cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence            456666666544 333444443  356899999888877778888899999888853332 334567777777653   4


Q ss_pred             ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCcCCCCCc
Q 014769          181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGW  259 (419)
Q Consensus       181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~  259 (419)
                      ..+.++++++.--+...  +++.+|+++|+++|+..|+..||+-=...  -...+..-...++ .+++.|+-|.|..| .
T Consensus       155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~--~~~~i~~a~~~GRvda~vqS~dkNF~VP-v  229 (389)
T PF05889_consen  155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSK--CMHLIQQAWRVGRVDAFVQSTDKNFMVP-V  229 (389)
T ss_dssp             GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH--HHHHHHHHHHHSTCSEEEEEHHHHHCEE-S
T ss_pred             CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHH--HHHHHHHHHhcCCcceeeeecCCCEEec-C
Confidence            45667777654444443  36999999999999999999999840000  0000000000011 16777899998654 2


Q ss_pred             eeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh----cCCC
Q 014769          260 RFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK----EIPC  335 (419)
Q Consensus       260 r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~  335 (419)
                      .-+.+++++       +..+..+.....-- ...++.......++.-+.. .+.......++...++.+.|+    +. +
T Consensus       230 Ggai~As~~-------~~~i~~vs~~YpGR-as~sp~ld~~itLl~LG~~-g~~~ll~~r~~~f~~l~erl~~~aee~-~  299 (389)
T PF05889_consen  230 GGAIMASFD-------PSGILAVSKEYPGR-ASASPSLDLFITLLSLGCT-GYGALLKERKASFPYLKERLKKWAEEV-G  299 (389)
T ss_dssp             SHEEEEESS-------HHHHHHHHHTSHSH-BTSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             CCcEEEecC-------HHHHHHHHHHhhhh-hhcccchHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence            234455443       35666666543211 1122233344444443332 233333333333333333333    22 2


Q ss_pred             CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeE----eecCCCCC-------CCCeEEEEe--ecCHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVI----VTPGIYVG-------LKNWLRIAF--CAEPSALK  402 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~----v~~g~~~~-------~~~~~Ris~--~~~~~~l~  402 (419)
                      -.....|.....+.+.++....... .+.-++...|..++|.    |.|+..+.       ...++=++.  +.++||++
T Consensus       300 e~ll~~p~N~is~a~tl~~l~~~~~-k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd  378 (389)
T PF05889_consen  300 ERLLETPRNHISMAFTLDTLYEISQ-KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVD  378 (389)
T ss_dssp             EEBSSSTT-SSEEEEE-TTCCTCCS-SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHH
T ss_pred             hhhcCCCCCCeeEEEECccchhhcc-chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHH
Confidence            1212245544444455543211011 2334445555767773    33332221       136888854  78999999


Q ss_pred             HHHHHHHHHHH
Q 014769          403 DGLGRMKAFCQ  413 (419)
Q Consensus       403 ~~l~~l~~~~~  413 (419)
                      .++++|+++++
T Consensus       379 ~~v~rL~k~i~  389 (389)
T PF05889_consen  379 YFVKRLDKIIK  389 (389)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhC
Confidence            99999999875

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.75  E-value=1.8e-08  Score=91.08  Aligned_cols=251  Identities=19%  Similarity=0.173  Sum_probs=50.8

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCC-----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGI-----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA  132 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd  132 (419)
                      .+.++++.+++.+.+.......|.-..|-     ..+.+.+++.        ...+..+++++..+|+..++.+++ +|.
T Consensus        16 s~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~l--------tgAeaA~VvNnnaAAv~L~l~~la-~~~   86 (367)
T PF03841_consen   16 SPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCEL--------TGAEAALVVNNNAAAVLLALNTLA-KGK   86 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc--------cccccccccccccccccccccccc-ccc
Confidence            35677888888776644322234322222     1222233332        356788899999999999999886 567


Q ss_pred             eEEeeCCCCC------CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc--ccCCCHHHHHH
Q 014769          133 NVLLPRPGWP------YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC--GNVFTYHHLQE  204 (419)
Q Consensus       133 ~vlv~~p~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt--G~~~~~~~l~~  204 (419)
                      +|++..-.-.      -+.++....|..++.+...    ....+++.+++++++|.+++.++++|..  |..-+ -.+++
T Consensus        87 EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~e  161 (367)
T PF03841_consen   87 EVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEE  161 (367)
T ss_dssp             -------------------------------------------------------------------------------H
T ss_pred             ccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc-ccHHH
Confidence            7776643322      2456677778887776532    1356788899999999999999988753  32211 13899


Q ss_pred             HHHHHHhCCCeEEEcccccccc----cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          205 IAEMARKLRVMVVADEVYGHLT----FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       205 i~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      +++++++|++++++|...+.+.    |+-..-+.+..+-..+-.+++.|-.|.++  |...|.++++.        ++++
T Consensus       162 l~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gkk--------~lI~  231 (367)
T PF03841_consen  162 LAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGKK--------ELIE  231 (367)
T ss_dssp             HHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEEH--------HHHH
T ss_pred             HHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeCH--------HHHH
Confidence            9999999999999998774332    11111122333333333478888899854  55589999986        7999


Q ss_pred             HHHhhh-ccccCCchHHHHHHHHHHcccch-----------HHHHHHHHHHHHHHHHHHHHhhc
Q 014769          281 SIKDCL-SIYSDIPTFIQGAIPQILEKTKE-----------DFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       281 ~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      +++... ....-+.-....++.+.|+....           ..+....+.++++.+.+...|..
T Consensus       232 ~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~  295 (367)
T PF03841_consen  232 KLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA  295 (367)
T ss_dssp             HHHHHHHTTT-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred             HHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence            888653 22334455555555555543221           11333345566666666666665

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.65  E-value=1.5e-06  Score=75.28  Aligned_cols=170  Identities=18%  Similarity=0.264  Sum_probs=111.9

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCC-CCCcH----------HHHhhcC
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG-WPYYE----------GIAQRKQ  152 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~-~~~~~----------~~~~~~g  152 (419)
                      -|-..|.+-.|+-+    |.....-+.-+. ++|+|+..++..+++|||+.+..... |....          ..++..|
T Consensus        65 ~GRdtLe~vyA~vf----~aE~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfg  139 (416)
T COG4100          65 LGRDTLERVYAQVF----GAEAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFG  139 (416)
T ss_pred             cchhHHHHHHHHHh----ccccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhC
Confidence            46566666666655    322222233344 55899999999999999998855332 32221          2344556


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC-CCccccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGS  229 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~  229 (419)
                      +....+++.+  +..+|.+.+...++++++++.|..- ..----.++.+++++++++.++.  |+++++|.+|++|.-.-
T Consensus       140 i~Y~~v~Lt~--~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~  217 (416)
T COG4100         140 IKYKAVPLTA--DGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK  217 (416)
T ss_pred             cceeeccccc--CCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc
Confidence            6666677654  3479999999999999999887643 11111137889999999999875  68999999999987443


Q ss_pred             CCCCCccccCCCCcEEEEecCCCcCCCCCce--eEEEEeeC
Q 014769          230 IPYTPMGLFGSIVPVITLGSISKRWLVPGWR--FGWLVTND  268 (419)
Q Consensus       230 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r--~G~~~~~~  268 (419)
                      ++.    ..+.+   +.-+|+-|. ...|+-  -||++++.
T Consensus       218 EPt----~vGaD---liAGSLIKN-pGGgiaktGGYiaGk~  250 (416)
T COG4100         218 EPT----HVGAD---LIAGSLIKN-PGGGIAKTGGYIAGKA  250 (416)
T ss_pred             Ccc----ccchh---hhccceeeC-CCCceeeccceeechH
Confidence            221    22333   677889898 333322  48888765

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.62  E-value=6.3e-05  Score=76.97  Aligned_cols=277  Identities=12%  Similarity=0.105  Sum_probs=154.3

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---CCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEec
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA---RPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDL  160 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  160 (419)
                      ++..-|+++.      +.+..|.-+-.++|++-+.++.+..   .+..+|++++-.|+.+...+    +..|++++.   
T Consensus       128 e~Qtmi~~Lt------Gm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~---  198 (954)
T PRK12566        128 NFQQMTIDLT------GLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV---  198 (954)
T ss_pred             HHHHHHHHHh------CchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE---
Confidence            3444555554      4555565566676666555544442   22468999999998766544    344555443   


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                                ++++..+..+...+++.+|+. .|.+-+   +++|.++++++|.++++ .+.- +..+  ...+...++.
T Consensus       199 ----------~~~~~~~~~~~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~~-~~d~-laL~--ll~~Pge~GA  260 (954)
T PRK12566        199 ----------DAVDNLAAHAVFGALLQYPDT-HGEIRD---LRPLIDQLHGQQALACV-AADL-LSLL--VLTPPGELGA  260 (954)
T ss_pred             ----------cchhhcCCCCEEEEEEECCCC-ceEEcc---HHHHHHHHHHcCCEEEE-EeCH-HHHh--CCCChhhcCC
Confidence                      233344444667788888876 788755   89999999999987653 2211 1111  1112234444


Q ss_pred             CCcEEEEecCCCcCC----CCCceeEEEEeeCCC------Ccc-------chhhHH-------HHHHhhhccc-cCCch-
Q 014769          241 IVPVITLGSISKRWL----VPGWRFGWLVTNDPN------GIF-------QKSGII-------DSIKDCLSIY-SDIPT-  294 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~------~~~-------~~~~~~-------~~l~~~~~~~-~~~~~-  294 (419)
                      +   |++++ ++.||    ..|.-.||+.+++.-      ++.       .++.+.       +.++....++ .+.+. 
T Consensus       261 D---I~vG~-~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qa  336 (954)
T PRK12566        261 D---VVLGS-TQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQV  336 (954)
T ss_pred             c---EEeeC-CCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHH
Confidence            4   66663 33334    446779999886520      000       000000       1112111111 11111 


Q ss_pred             HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769          295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE  374 (419)
Q Consensus       295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  374 (419)
                      +...++..++.....+.+++...+...+..++.+.|.+. |++..   ...+|-.+.+...     ....++..+. .+.
T Consensus       337 L~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~---~~~fF~~~~v~~~-----~~~~~~~~~a-~~~  406 (954)
T PRK12566        337 LLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIKRL---NRHFFDTLTLEVG-----GAQAAIIESA-EAA  406 (954)
T ss_pred             HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCccc---cCCccceEEEEcc-----CCHHHHHHHH-HHC
Confidence            111222222232346889999999999999999999984 88733   2244544444321     0244555444 556


Q ss_pred             CeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769          375 SVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK  409 (419)
Q Consensus       375 gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~  409 (419)
                      ||-+.--.    ++.+.+|+  .++.++++.++..+.
T Consensus       407 ~~n~r~~~----~~~~~~s~de~~~~~~~~~~~~~f~  439 (954)
T PRK12566        407 RINLRILG----RGRLGVSLDETCDEATVARLFDIFL  439 (954)
T ss_pred             CCeeEEeC----CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence            88765432    46788888  467899999888873

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.55  E-value=7.5e-06  Score=74.46  Aligned_cols=317  Identities=13%  Similarity=0.093  Sum_probs=166.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-------CC-----CeEE-eeCCCCCCcH
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-------PG-----ANVL-LPRPGWPYYE  145 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-------~g-----d~vl-v~~p~~~~~~  145 (419)
                      .|...++..-..+.+-....+..|.....+.|+--.|+.+.++...-+--+       .|     +-|+ ..+-+|+++.
T Consensus       132 TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~  211 (510)
T KOG0629|consen  132 TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK  211 (510)
T ss_pred             eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH
Confidence            344333333333333333333344444445555545555555554433211       11     3344 3467888899


Q ss_pred             HHHhhcCCE---EEEEeccCCCCcccChHHHHHhhcCC-cc-EE-EEeCCC---CccccCCCHHHHHHHHHHHHhCCCeE
Q 014769          146 GIAQRKQVE---VRHFDLLPERNWEVDLDAVEALADKN-TA-AM-VIINPG---NPCGNVFTYHHLQEIAEMARKLRVMV  216 (419)
Q Consensus       146 ~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~v-~i~~p~---nptG~~~~~~~l~~i~~~~~~~~~~l  216 (419)
                      ..+..+|+.   +..++.  +....+.+++|++.+-.. .+ .+ ++++.+   .--|..=|   |..++++|.+|++|+
T Consensus       212 kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~~lWm  286 (510)
T KOG0629|consen  212 KAAAFLGLGTDHCIKVKT--DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKHKLWM  286 (510)
T ss_pred             HHHHHhccCCceeEEecc--cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhcCEEE
Confidence            999999954   444443  334579999999876431 11 11 333333   33455544   999999999999999


Q ss_pred             EEccccccccc-CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-c-------
Q 014769          217 VADEVYGHLTF-GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-S-------  287 (419)
Q Consensus       217 i~De~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~-------  287 (419)
                      ++|.+|++... ......-+...... + -+..+.+|. ..+.+.++....+.+.       +.+...... .       
T Consensus       287 HvDAAwGGglLmS~k~R~kl~Giera-~-SvtwnpHK~-~gaplqCsa~l~r~~g-------ll~~Cn~~~A~YLFq~dK  356 (510)
T KOG0629|consen  287 HVDAAWGGGLLMSRKHRHKLTGIERA-N-SVTWNPHKL-MGAPLQCSAFLTREEG-------LLQRCNQMSAIYLFQQDK  356 (510)
T ss_pred             EeecccccccccChhhHhhccCcccc-C-ceeecHHHh-hcCcchhhHHHHHHHH-------HHHhhcccchhhhhccCc
Confidence            99999987332 21111112111111 1 234478898 5667888887776532       222222110 0       


Q ss_pred             -c--c-cCCchHHHHH-----HHHHH--cccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC--CCceEEEEeecCc
Q 014769          288 -I--Y-SDIPTFIQGA-----IPQIL--EKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK--PEGSMVTMVKLNP  354 (419)
Q Consensus       288 -~--~-~~~~~~~~~a-----~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--p~~g~~~~~~~~~  354 (419)
                       +  + -+..-..|-.     ....|  .......+++..+++-+.++++.+.|++.++...+..  |+...+.+-..|+
T Consensus       357 ~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~  436 (510)
T KOG0629|consen  357 FYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPP  436 (510)
T ss_pred             eeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCch
Confidence             0  0 0111112211     11111  2222466888899999999999999998766553433  4533333323343


Q ss_pred             ccccCCCCHHHH-----------HHHHHHhcCeEeecCCCCC-CCCeEEEEee---cCHHHHHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEF-----------ALKLAKEESVIVTPGIYVG-LKNWLRIAFC---AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       355 ~~~~~~~~~~~~-----------~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~---~~~~~l~~~l~~l~~~~  412 (419)
                      ... +...+.+.           -+.+++ .|-.-..-...+ .++++|+.+.   .+.++++.+++.|..+-
T Consensus       437 ~lR-~~~~~~e~~~rL~kVaPkIK~~Mm~-~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg  507 (510)
T KOG0629|consen  437 SLR-GWQENPERDSRLVKVAPKIKERMMK-KGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG  507 (510)
T ss_pred             Hhc-cCcccchhhhHHHhhCcHHHHHHHh-ccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence            211 11111111           122222 233322111111 2578999883   47899999999988754

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=98.04  E-value=0.0013  Score=63.47  Aligned_cols=311  Identities=14%  Similarity=0.085  Sum_probs=173.1

Q ss_pred             CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc-cHHHHHHHHHHH----hcCCC----CeEEeeCCCCCCcHHHHhhcCC
Q 014769           83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTL-GCKQAVEVILSV----LARPG----ANVLLPRPGWPYYEGIAQRKQV  153 (419)
Q Consensus        83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~-g~~~al~~~~~~----l~~~g----d~vlv~~p~~~~~~~~~~~~g~  153 (419)
                      .+|+.++-+.+.++|-..-    .-+.+.+-+ ++.++-+..++.    +..+|    ...++|...|..-...+++.|.
T Consensus       577 aqGY~~lf~~Le~~Lc~iT----G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm  652 (1001)
T KOG2040|consen  577 AQGYQQLFTELEKDLCEIT----GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM  652 (1001)
T ss_pred             HhhHHHHHHHHHHHhheee----cccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence            4788888888888775532    335665543 333333332222    32333    2456777788877888999999


Q ss_pred             EEEEEeccCCCCcccChHHHHHhhcCC---ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC
Q 014769          154 EVRHFDLLPERNWEVDLDAVEALADKN---TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI  230 (419)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~  230 (419)
                      +++.+.++..  ..+|..+|+...+..   -.++.++-|+.- |+  =++.+++++++.++||.-+..|.+--.-..+-.
T Consensus       653 kvvpV~~~~~--G~id~~dLk~kaekh~~~Laa~MvTYPST~-Gv--fE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc  727 (1001)
T KOG2040|consen  653 KVVPVGCDAN--GNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GV--FEEGIDDICDIIHEHGGQVYLDGANMNAQVGLC  727 (1001)
T ss_pred             EEEEeeccCC--CCccHHHHHHHHHHhhhhhheeEEeccccc-cc--ccccHHHHHHHHHhcCCEEEecCCCccceeccc
Confidence            9999988644  468999998776543   345666666542 32  234589999999999999999986543222111


Q ss_pred             CCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC-CccchhhHHHHHHh--------hhccccCC--chH
Q 014769          231 PYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN-GIFQKSGIIDSIKD--------CLSIYSDI--PTF  295 (419)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~-~~~~~~~~~~~l~~--------~~~~~~~~--~~~  295 (419)
                      .   ...++.+   +.=--++|.|..|    |..+|=+.+...- ..+-...++.-.+.        .....++.  -.+
T Consensus       728 ~---pGd~GaD---V~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILp  801 (1001)
T KOG2040|consen  728 R---PGDIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILP  801 (1001)
T ss_pred             C---Ccccccc---ceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeeh
Confidence            1   1122222   2222466766543    5556666554310 00000011111000        00001111  112


Q ss_pred             HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769          296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG--SMVTMVKLNPWLLEDINDDIEFALKLAKE  373 (419)
Q Consensus       296 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~~~~~~~~~~~~~~~~~~~ll~~  373 (419)
                      ..++..+++..   ..+........-+.+++..+|+.+-.+- +..+.+  +.-+.+++.+.+.....++.+++.+| .+
T Consensus       802 ISwaYikmMG~---~GL~~as~~AiLNaNYMakRLe~hYkil-~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL-~D  876 (1001)
T KOG2040|consen  802 ISWAYIKMMGS---GGLKDASKIAILNANYMAKRLESHYKIL-FRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRL-MD  876 (1001)
T ss_pred             hHHHHHHHhcc---cccchhhHHHhhhhHHHHHHHhhcccee-EecCCcceeeeeeeechhhccccCCcHHHHHHHH-Hh
Confidence            33454555543   3455555555667888888888741221 212222  22334455443322223577888777 78


Q ss_pred             cCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769          374 ESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       374 ~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                      +|+.- |.-.|-..+++-|-+.  .+.+|+|++++.+-.+-++
T Consensus       877 YgFHa-PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreE  918 (1001)
T KOG2040|consen  877 YGFHA-PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREE  918 (1001)
T ss_pred             ccCCC-CccccccCCceEeccCccccHHHHHHHHHHHHHHHHH
Confidence            99975 5555556788888884  4568999988887655443

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=97.87  E-value=0.0091  Score=52.57  Aligned_cols=323  Identities=14%  Similarity=0.050  Sum_probs=175.1

Q ss_pred             ChHHHHHHHHHHHhCC-CCCCC-------CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC
Q 014769           60 TAVEAEDAIVDAVRSG-KFNCY-------ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG  131 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~-~~~~Y-------~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g  131 (419)
                      .|+..+..+.+.++.. ...-|       +...+....-..++...      +...++|.+.++-|..+..++.++-+|-
T Consensus        79 mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~EvavmNsLTvNlh~Ll~sFyKPT  152 (465)
T KOG3846|consen   79 MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAVMNSLTVNLHSLLISFYKPT  152 (465)
T ss_pred             CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhhHhhhhhHHHHHHHHhcCCc
Confidence            4556666666555431 11112       22233444455555554      5678899999999999999999997764


Q ss_pred             ---CeEEeeCCCCCC----cHHHHhhcCCEEE--EEeccC-CCCcccChHHHHHhhcCCc---cEEEEeCCCCccccCCC
Q 014769          132 ---ANVLLPRPGWPY----YEGIAQRKQVEVR--HFDLLP-ERNWEVDLDAVEALADKNT---AAMVIINPGNPCGNVFT  198 (419)
Q Consensus       132 ---d~vlv~~p~~~~----~~~~~~~~g~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~---~~v~i~~p~nptG~~~~  198 (419)
                         -+|+.+.-.|++    +...++..|..+.  .+-+.| ++...+..+++.+.+..+.   ..|+++..+.-||+.++
T Consensus       153 ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fd  232 (465)
T KOG3846|consen  153 EKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFD  232 (465)
T ss_pred             chhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccc
Confidence               468888777664    3455666676542  122223 2334566777777776543   33455566899999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~  277 (419)
                         +.+|...-+..|.++=.|-+++.    |.-+..+..++.   .+.+++--|.+ .+| -.+|-+.+.+...-    +
T Consensus       233 ---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgV---DFACWCSYKYl-naGaGgIgGlFvHekh~~----~  297 (465)
T KOG3846|consen  233 ---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGV---DFACWCSYKYL-NAGAGGIGGLFVHEKHTK----E  297 (465)
T ss_pred             ---hhhhhhcccCCCcEechhhhhhh----cCCceEEeecCC---ceEEEeeeccc-ccCCCccceeeeehhhhc----c
Confidence               77777666667889999999886    222222333444   37788878873 443 23555555432111    1


Q ss_pred             HHHHHHhhh---------------------cc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          278 IIDSIKDCL---------------------SI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       278 ~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      ...++..+.                     .+ -+.++.....++..-|+--..-.+++.+.+-.-...++...++...|
T Consensus       298 ~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g  377 (465)
T KOG3846|consen  298 SLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKG  377 (465)
T ss_pred             hhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcc
Confidence            122222111                     11 11233333333322222111112333332222222333333332111


Q ss_pred             -----------CCCCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cC
Q 014769          336 -----------ISCPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AE  397 (419)
Q Consensus       336 -----------~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~  397 (419)
                                 +. ..+|    +.|.-+.+.+..       +...+..+| .++|+..--    ..++.+|+++.   .+
T Consensus       378 ~~~~~rt~Kl~~~-IiTP~~~~erGcQLsl~Fss-------p~~~vfqeL-~krGv~~Dk----R~PNvIRvAPvpLYN~  444 (465)
T KOG3846|consen  378 YKHPLRTEKLFFT-IITPTSTDERGCQLSLYFSS-------PTPKVFQEL-HKRGVIGDK----RRPNVIRVAPVPLYNT  444 (465)
T ss_pred             cCchhhhcceeEE-EeCCcccccccceEEEEeCC-------CchHHHHHH-HHcCeeccc----cCCCceEeecchhhcc
Confidence                       11 1122    235555555542       223444455 677987532    12678999984   36


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 014769          398 PSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~~~~~  416 (419)
                      -.++..+++.|.++.....
T Consensus       445 f~Dvy~f~n~L~e~~d~~e  463 (465)
T KOG3846|consen  445 FSDVYIFVNALNEAMDKLE  463 (465)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            6899999999998887654

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=97.77  E-value=0.00022  Score=61.03  Aligned_cols=302  Identities=15%  Similarity=0.162  Sum_probs=145.0

Q ss_pred             hCCCCCCCCcEEEcccHHHHHHHHHHHhc--CCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHH
Q 014769          100 DLPYKLSADDVYVTLGCKQAVEVILSVLA--RPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEA  175 (419)
Q Consensus       100 ~~~~~~~~~~i~~t~g~~~al~~~~~~l~--~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~  175 (419)
                      ..|.+.-.+.+++--.+-..+...+.++.  +|. .-|+.+.-.-.+.....-..|+++..+.-..+ +....|++.++.
T Consensus        69 l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~  148 (432)
T KOG3843|consen   69 LAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEA  148 (432)
T ss_pred             HhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHH
Confidence            34555545555553333334555555554  343 34444443333344455567888766553322 234457888877


Q ss_pred             hhcCC-ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCc
Q 014769          176 LADKN-TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKR  253 (419)
Q Consensus       176 ~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~  253 (419)
                      .+.+. ...++..+-....=..-+++.+++|..+|..|++.-++..+|+.-.-.  -..-+..-..-++ ..++.|+-|.
T Consensus       149 ~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee--~i~~iaa~~~~grida~vqsldkn  226 (432)
T KOG3843|consen  149 IIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE--CIHKIAAAAECGRIDAFVQSLDKN  226 (432)
T ss_pred             HHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHH--HHHHHHHHhhhccHHHHHHHhhhc
Confidence            77653 333332222111111235678999999999999999999999742100  0000111111111 2456789999


Q ss_pred             CCCCCceeE-EEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHH---HH---HHHHHHHHHHHHH
Q 014769          254 WLVPGWRFG-WLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDF---FC---KLIDTLRESAEIC  326 (419)
Q Consensus       254 ~~~~G~r~G-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~---~~---~~~~~~~~~~~~l  326 (419)
                      |..|   +| .+++ .    ++ ..+++.+.+... .-..+.++...+..+|..+...+   +.   ++...++.....+
T Consensus       227 f~vp---vggaiia-~----fk-~n~iq~iak~yp-grasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~  296 (432)
T KOG3843|consen  227 FMVP---VGGAIIA-A----FK-DNFIQEIAKMYP-GRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKF  296 (432)
T ss_pred             ceee---cchhHhh-H----hH-HHHHHHHHHhCC-CccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8766   33 3332 1    11 134444443322 11223334444455555443322   22   2233333333333


Q ss_pred             HHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCe---EeecCCCC------------CC-----
Q 014769          327 YDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV---IVTPGIYV------------GL-----  386 (419)
Q Consensus       327 ~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv---~v~~g~~~------------~~-----  386 (419)
                      .+.+.+    .....|+....+-+.+..... ....+..+....|..+||   .|+|.+..            +.     
T Consensus       297 ae~~~e----~l~~~p~n~is~amtl~ti~~-~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~  371 (432)
T KOG3843|consen  297 AEAIGE----CLLETPENEISLAMTLKTIDE-AKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQ  371 (432)
T ss_pred             HHHhhh----hhhcCCCchhhhhhhhccCCh-HHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcC
Confidence            444333    112345544333332321100 000123344445555565   34444322            11     


Q ss_pred             -CCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          387 -KNWLRIAF--CAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       387 -~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                       -.|+-+.+  +.+..++++++++|...+..++++
T Consensus       372 ~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke  406 (432)
T KOG3843|consen  372 HCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKE  406 (432)
T ss_pred             chhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHH
Confidence             12344443  457789999999999988777653

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=97.75  E-value=0.0052  Score=53.46  Aligned_cols=334  Identities=16%  Similarity=0.124  Sum_probs=173.6

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC----CCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF----NCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~----~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      ...++||+-|- .    ..+.+.+.++-.+.+.-...    ..-+ .+.-...+.+.....+.+.+.++-+-+-+++-.|
T Consensus         5 ~~~vvnFaaGP-A----klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGG   79 (370)
T KOG2790|consen    5 PERVVNFAAGP-A----KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGG   79 (370)
T ss_pred             ccceeecCCCc-c----cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCC
Confidence            66789999993 2    22334444444444432110    0000 0112233333333334443444444444566788


Q ss_pred             HHHHHHHHHHHhcC--CC---CeEEeeCCCCCCcHHHHhhcCCE-EEEEeccCCC-CcccChHHHHHhhcCCccEEEEeC
Q 014769          116 CKQAVEVILSVLAR--PG---ANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPER-NWEVDLDAVEALADKNTAAMVIIN  188 (419)
Q Consensus       116 ~~~al~~~~~~l~~--~g---d~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~  188 (419)
                      +|+-+.++...|+.  .|   |-|+.-..+--.+.. ++.+|.. .+..+..... +--+|.+.++.  +++.+.|++|.
T Consensus        80 Gt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~E-Akk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCa  156 (370)
T KOG2790|consen   80 GTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEE-AKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCA  156 (370)
T ss_pred             CcccccccchhhhccccCCccceEEeccccHHHHHH-HHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEec
Confidence            88888887777763  34   444433333333333 3445544 3333322111 11244444433  23455677775


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      -..--|+-++     .+- +-..++.++|.|-...++.    .+..+..+     -+++.+..|.+|.+|  +-.++.++
T Consensus       157 NETVHGVEf~-----~~P-~~~~~~~vlVaDmSSnflS----rpvDvsk~-----gvi~aGAQKN~G~aG--~Tvvivr~  219 (370)
T KOG2790|consen  157 NETVHGVEFD-----FIP-VNDPKGAVLVADMSSNFLS----RPVDVSKF-----GVIFAGAQKNVGPAG--VTVVIVRK  219 (370)
T ss_pred             CceeeceecC-----CCC-CCCCCCceEEEecccchhc----CCccchhc-----ceEEeccccccCccc--cEEEEEeh
Confidence            4334455433     111 1224577888887665432    12222222     266778899988888  44555554


Q ss_pred             CCCccchhhHHHHHHhh-------------hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          269 PNGIFQKSGIIDSIKDC-------------LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                              +++......             .+...+++....++...+++... ...++.+...-.+..+.+++.|.+..
T Consensus       220 --------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~  291 (370)
T KOG2790|consen  220 --------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN  291 (370)
T ss_pred             --------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence                    233222211             12345566666665555555432 34567777777788899999998754


Q ss_pred             CCC-CCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769          335 CIS-CPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK  409 (419)
Q Consensus       335 ~~~-~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~  409 (419)
                      |+. |...|.  +-|-+.+++.+.     .-..+|..+..+++=|.+ -|.  ..-+.+|-|+  +.+-++.+.+++-++
T Consensus       292 gfy~cpVe~~~RS~MNV~Fri~~d-----~Le~eFLkeA~~~~mv~L-KGh--RSVGGiRASlYNAisv~~~q~L~~~m~  363 (370)
T KOG2790|consen  292 GFYRCPVEPSVRSRMNVPFRIEKD-----ELEAEFLKEAAKEHMVQL-KGH--RSVGGIRASLYNAISVEEVQKLAAFMK  363 (370)
T ss_pred             CeEEcccchhhhhhcccceeecch-----HHHHHHHHHHHHhhhhcc-ccc--cccccchhhhhccccHHHHHHHHHHHH
Confidence            543 333343  234555566532     124567777655543333 332  2346789999  578888888888887


Q ss_pred             HHHHHH
Q 014769          410 AFCQRH  415 (419)
Q Consensus       410 ~~~~~~  415 (419)
                      ++.+.+
T Consensus       364 ~F~k~h  369 (370)
T KOG2790|consen  364 EFQKKH  369 (370)
T ss_pred             HHHHhc
Confidence            776654

>PLN02672 methionine S-methyltransferase

Probab=96.95  E-value=0.026  Score=59.65  Aligned_cols=214  Identities=11%  Similarity=0.050  Sum_probs=125.6

Q ss_pred             HHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc------CCCCeEEeeCC
Q 014769           66 DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA------RPGANVLLPRP  139 (419)
Q Consensus        66 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~------~~gd~vlv~~p  139 (419)
                      ..+...+.+..+..|.++.|...+|..||.|++..+++++++++|++.++-..|++.+++.+.      +.+.+-.++  
T Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  485 (1082)
T PLN02672        408 AYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP--  485 (1082)
T ss_pred             HHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC--
Confidence            444555566666789999999999999999999999999999999999999999998888763      222111111  


Q ss_pred             CCCCcHHHHhhcC--------CEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769          140 GWPYYEGIAQRKQ--------VEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMAR  210 (419)
Q Consensus       140 ~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~  210 (419)
                        ..|...+...|        ..+..+.-+.      .-+.+.++++. ++++|+..-..   +-..+...++.|.+.++
T Consensus       486 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  554 (1082)
T PLN02672        486 --KKWLTSLAIENATSDSKSDDVITVIEAPR------QSDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTA  554 (1082)
T ss_pred             --HHHHhHhhhhcccccCccCCeEEEEeCCC------cchHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHH
Confidence              11222222222        2222222111      12344455544 34444432222   22345566899999999


Q ss_pred             hCCCeEEEcccccccccCCCCCCCc----cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh
Q 014769          211 KLRVMVVADEVYGHLTFGSIPYTPM----GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL  286 (419)
Q Consensus       211 ~~~~~li~De~~~~~~~~~~~~~~~----~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~  286 (419)
                      +.|..++.|..-..-.....+...+    ..-....+..++-++-|.--.+.+-+.+++.-+.       .+...+....
T Consensus       555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  627 (1082)
T PLN02672        555 EIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENE-------AVLKALSKTG  627 (1082)
T ss_pred             hhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcH-------HHHHHHHHHH
Confidence            9999999998654322111111111    1111112334444688886678999999986442       3555555443


Q ss_pred             cc-ccCCchHHHHH
Q 014769          287 SI-YSDIPTFIQGA  299 (419)
Q Consensus       287 ~~-~~~~~~~~~~a  299 (419)
                      .. .+..+...|+-
T Consensus       628 ~~~~~~~~~~~~~~  641 (1082)
T PLN02672        628 EVLEGRTAIISQFY  641 (1082)
T ss_pred             HhhccchHHHHHHH
Confidence            22 34445555543

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=96.42  E-value=0.91  Score=44.69  Aligned_cols=311  Identities=13%  Similarity=0.154  Sum_probs=149.8

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH----HHHH---HHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cC
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA----IADY---LSRDLPYKLSADDVYVTLGCKQAVEVILSVL-AR  129 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~----ia~~---l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~  129 (419)
                      .-+|+.+++-+.+..  +++.+|.|.+  +++.+-    +-.|   +...-  +++-.+.-+-.-+|++-++...+. ..
T Consensus       130 ~~vP~~I~RNilenp--~W~TqYTPYQ--~EIsQGRLEsllNyQTmi~dlT--GL~~aNASLLDEgTAaaEAm~l~~~~~  203 (1001)
T KOG2040|consen  130 THVPAVILRNILENP--GWYTQYTPYQ--AEISQGRLESLLNYQTMITDLT--GLPMANASLLDEGTAAAEAMALCNRIN  203 (1001)
T ss_pred             ccCcHHHHHHhhhCC--cceeccCCCc--hhhhhhhHHHHhhhHHhhhhcc--CCcccchhhhccchhHHHHHHHHHhhc
Confidence            345666666554432  4566788743  232221    1111   11111  344445444334444444433332 34


Q ss_pred             CCCeEEeeCCCCCCcHHHHhhc--CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHH
Q 014769          130 PGANVLLPRPGWPYYEGIAQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE  207 (419)
Q Consensus       130 ~gd~vlv~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  207 (419)
                      +..+.++..-+|+.....++-.  ++.+...-        .|+++.... ..+...+++.-|.. -|.+.+   ..++++
T Consensus       204 krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~--------~~~~~~~~s-~~~v~gvlvQYP~t-~G~i~d---~~el~~  270 (1001)
T KOG2040|consen  204 KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVV--------SDIKEADYS-SKDVSGVLVQYPDT-EGSVLD---FDELVE  270 (1001)
T ss_pred             ccceEEecCCCCcchhhhhhccccccceeEEe--------cCHHHhhcc-ccceeEEEEEcCCC-CCcccC---HHHHHH
Confidence            5677999999998765544321  22222111        122222111 11334455555554 677777   788888


Q ss_pred             HHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCC-------------C
Q 014769          208 MARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDP-------------N  270 (419)
Q Consensus       208 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~-------------~  270 (419)
                      .+++++..+++-.-  .+...  -..+...++.+   |.++|.... |.|    |.-.||++++++             .
T Consensus       271 ~a~~~~s~vv~atD--LLaLt--iLrpPgefGaD---IavGSsQRF-GVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtk  342 (1001)
T KOG2040|consen  271 LAHANGSLVVMATD--LLALT--ILRPPGEFGAD---IAVGSSQRF-GVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTK  342 (1001)
T ss_pred             HhhccCceEEEeeh--hhHHH--ccCChhhcCce---eeecccccc-CccccCCCchHHHHHHHHHHHhhCCCceEeeee
Confidence            88898877654211  11100  11122344443   777775553 543    222333333211             0


Q ss_pred             CccchhhHHHHHHhhhc-c---ccCCchH-HHHHHHH---HHcc-cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769          271 GIFQKSGIIDSIKDCLS-I---YSDIPTF-IQGAIPQ---ILEK-TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK  341 (419)
Q Consensus       271 ~~~~~~~~~~~l~~~~~-~---~~~~~~~-~~~a~~~---~l~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  341 (419)
                      ....+..+.-+++...+ .   -.+.|.- +|+.++.   ++.- .....++++.+++......+...|+.. |.++.  
T Consensus       343 D~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~--  419 (1001)
T KOG2040|consen  343 DALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQ--  419 (1001)
T ss_pred             cccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhc--
Confidence            00111112222221110 0   0111111 2221111   1111 225788999999999999999999876 55522  


Q ss_pred             CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769          342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK  409 (419)
Q Consensus       342 p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~  409 (419)
                       .-.+|-.+++...     .+..++..+.++ ++|-+.-    ..++.+=+++  ..++++++.++..+.
T Consensus       420 -~k~fFDTLkI~~~-----~s~~~~l~rA~~-~~iNlr~----~ed~tigvslDETv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  420 -HKPFFDTLKIRCG-----CSAEEVLDRAAK-RQINLRL----VEDGTIGVSLDETVTEKDVDDLLWVFN  478 (1001)
T ss_pred             -cccccceEEEEec-----CcHHHHHHHHHh-hcCceEE----eecCceEEeecccccHHHHHHHHHHHc
Confidence             2236666655432     145666666644 4554432    1256778888  457889998887765

>PRK10595 SOS cell division inhibitor; Provisional

Probab=90.47  E-value=6.6  Score=32.02  Aligned_cols=103  Identities=13%  Similarity=0.035  Sum_probs=66.9

Q ss_pred             cEEEc---ccHHH-HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          109 DVYVT---LGCKQ-AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       109 ~i~~t---~g~~~-al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      +|+..   +|-.+ .+.=++..+...+..|+...|-+..+...+...|++...+-.....+..-.+..++++++.+...+
T Consensus        30 Ell~~~~qpg~~e~LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~a  109 (164)
T PRK10595         30 ELVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSV  109 (164)
T ss_pred             EEeecCCCchHHHHHHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcE
Confidence            55664   44444 333333334456788888999999999999999987654443222221224567788998888888


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVM  215 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~  215 (419)
                      ++....+    .++.+++++|--.+++.+.+
T Consensus       110 VL~Wlp~----~l~~~~~RRLQlAAe~g~~l  136 (164)
T PRK10595        110 VLGWLPD----ELTEEEHARLVDAAQEGNAM  136 (164)
T ss_pred             EEECCcc----cCCHHHHHHHHHHHHhCCCE
Confidence            8887431    25677788888777776653

>TIGR00623 sula cell division inhibitor SulA

Probab=88.78  E-value=7.7  Score=31.68  Aligned_cols=85  Identities=11%  Similarity=0.024  Sum_probs=59.2

Q ss_pred             HhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC-CCCccccCCCHHHHHH
Q 014769          126 VLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGNVFTYHHLQE  204 (419)
Q Consensus       126 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~-p~nptG~~~~~~~l~~  204 (419)
                      .+...+..|+...|-+..+...+...|++...+-+.....-.-.+...+++++.....+++++ |+.     ++.+++++
T Consensus        55 ~Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRR  129 (168)
T TIGR00623        55 QLGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAK  129 (168)
T ss_pred             HhcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHH
Confidence            334467788888888888899999999886554332211112346788999998888888888 533     66777888


Q ss_pred             HHHHHHhCCCe
Q 014769          205 IAEMARKLRVM  215 (419)
Q Consensus       205 i~~~~~~~~~~  215 (419)
                      |--.+...+.+
T Consensus       130 LqlAA~~G~al  140 (168)
T TIGR00623       130 LVRAAEEGNAM  140 (168)
T ss_pred             HHHHHHhCCCe
Confidence            87777766554

All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=83.42  E-value=13  Score=31.84  Aligned_cols=99  Identities=16%  Similarity=0.215  Sum_probs=63.8

Q ss_pred             cEEEcccHHHHHHHHHHHhcCCCCeE---EeeCCCCC-----------CcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769          109 DVYVTLGCKQAVEVILSVLARPGANV---LLPRPGWP-----------YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus       109 ~i~~t~g~~~al~~~~~~l~~~gd~v---lv~~p~~~-----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  174 (419)
                      -+.+-+|+..++.++..++.. |-.|   +...|.-.           .....++..|+++......-  ...-..++|.
T Consensus         3 ~~aL~SGGKDS~~Al~~a~~~-G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~   79 (223)
T COG2102           3 VIALYSGGKDSFYALYLALEE-GHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELK   79 (223)
T ss_pred             EEEEEecCcHHHHHHHHHHHc-CCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHH
Confidence            367789999998888887753 3222   22222111           12345667788877766432  1223567777


Q ss_pred             HhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769          175 ALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       175 ~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  217 (419)
                      .+++. +...|+       +|.+.+..+..++-.+|++.|+-++
T Consensus        80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~  116 (223)
T COG2102          80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY  116 (223)
T ss_pred             HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence            77664 222343       7999999999999999999988655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	419
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		1e-71
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		6e-70
1bw0_A	416	Crystal Structure Of Tyrosine Aminotransferase From		3e-48
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		7e-33
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		2e-22
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		2e-22
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		4e-21
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		4e-20
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		5e-20
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		5e-20
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		9e-19
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		4e-18
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		5e-18
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		5e-18
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		7e-18
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		8e-18
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		9e-18
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		2e-17
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		2e-15
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		4e-15
3ihj_A	498	Human Alanine Aminotransferase 2 In Complex With Pl		6e-15
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		2e-14
1wst_A	417	Crystal Structure Of Multiple Substrate Aminotransf		3e-14
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		4e-14
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		4e-14
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		8e-14
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		1e-13
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		3e-13
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		3e-13
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		5e-13
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		1e-12
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		1e-12
3tcm_A	500	Crystal Structure Of Alanine Aminotransferase From		2e-12
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		3e-12
3piu_A	410	High-Resolution Structure Of Native Malus Domestica		4e-12
1b8g_A	429	1-aminocyclopropane-1-carboxylate Synthase Length =		4e-12
1m7y_A	435	Crystal Structure Of Apple Acc Synthase In Complex		4e-12
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		8e-11
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		2e-10
3f6t_A	533	Crystal Structure Of Aspartate Aminotransferase (E.		3e-10
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		4e-10
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		2e-09
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		3e-09
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		2e-08
3b1c_A	392	Crystal Structure Of Betac-S Lyase From Streptococc		3e-08
3l8a_A	421	Crystal Structure Of Metc From Streptococcus Mutans		9e-08
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		1e-07
4ge7_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		1e-07
1c7n_A	399	Crystal Structure Of Cystalysin From Treponema Dent		2e-07
3dzz_A	391	Crystal Structure Of A Putative Plp-Dependent Amino		2e-07
4gdy_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		3e-07
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		3e-07
4dgt_A	391	Crystal Structure Of Plp-Bound Putative Aminotransf		3e-07
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		6e-07
1vp4_A	425	Crystal Structure Of A Putative Aminotransferase (T		6e-07
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		6e-07
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		6e-07
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		8e-07
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		8e-07
2xh1_A	425	Crystal Structure Of Human Kat Ii-Inhibitor Complex		1e-06
2r2n_A	425	The Crystal Structure Of Human Kynurenine Aminotran		1e-06
2qlr_A	425	Crystal Structure Of Human Kynurenine Aminotransfer		1e-06
3ue8_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		1e-06
2vgz_A	427	Crystal Structure Of Human Kynurenine Aminotransfer		1e-06
3g7q_A	417	Crystal Structure Of Valine-Pyruvate Aminotransfera		1e-06
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		1e-06
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		1e-06
3nra_A	407	Crystal Structure Of An Aspartate Aminotransferase		2e-06
3fdb_A	377	Crystal Structure Of A Putative Plp-Dependent Beta-		2e-06
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		2e-06
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		2e-06
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		3e-06
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		1e-05
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		1e-05
3if2_A	444	Crystal Structure Of Putative Amino-Acid Aminotrans		2e-05
2x5f_A	430	Crystal Structure Of The Methicillin-Resistant Stap		3e-05
3euc_A	367	Crystal Structure Of Histidinol-Phosphate Aminotran		3e-05
3t32_B	383	Crystal Structure Of A Putative C-S Lyase From Baci		3e-05
1d2f_A	390	X-Ray Structure Of Maly From Escherichia Coli: A Py		4e-05
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		5e-05
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		6e-05
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		7e-05
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		2e-04
3qgu_A	449	L,L-Diaminopimelate Aminotransferase From Chalmydom		2e-04

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score =  267 bits (682), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 140/394 (35%), Positives = 222/394 (56%), Gaps = 15/394 (3%)
Query: 29  LASIIDS--VNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGI 86
           + +I+D+  V  N  + V+ L  GDPT F    T             SGK+N YA + G 
Sbjct: 16  IRAIVDNMKVKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGY 75
Query: 87  PPARRAIADYLS-RDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
             +R  +A Y    + P  L A DV +T GC QA+E+ L+VLA PG N+L+PRPG+  Y 
Sbjct: 76  LSSREEVASYYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYR 133
Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
            +A+   +EV+ ++LLPE++WE+DL  +E+L D+ TA +V+ NP NPCG+VF+  HLQ+I
Sbjct: 134 TLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKI 193
Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
             +A +  V ++ADE+YG + F    Y PM    + VP+++ G ++ RWLVPGWR GW++
Sbjct: 194 LAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWIL 253
Query: 266 TNDPNGIFQKSGIIDSIKDCLSIYSDI----PTFIQGAIPQILEKTKEDFFCKLIDTLRE 321
            +D   IF      + I+D L   S       T +QGA+  IL++T ++F+   +  L+ 
Sbjct: 254 IHDRRDIFG-----NEIRDGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKS 308
Query: 322 SAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
           +A++CY  +  IP +  P +P G+M  MV +      +  +D+EF  +L  E+SV   P 
Sbjct: 309 NADLCYGALSAIPGLQ-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPA 367
Query: 382 IYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
                 N+ R+        + +   R++ FC++H
Sbjct: 368 TCFEYPNFFRVVITVPEVMMLEACSRIQEFCEQH 401

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score =  261 bits (666), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 222/394 (56%), Gaps = 15/394 (3%)
Query: 29  LASIIDS--VNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGI 86
           + +I+D+  V  N  + ++ L  GDPT F    T             SGK+N YA + G 
Sbjct: 39  IRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGF 98
Query: 87  PPARRAIADYLS-RDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
             +R  IA Y    + P  L A DV +T GC QA+++ L+VLA PG N+L+PRPG+  Y+
Sbjct: 99  LSSREEIASYYHCPEAP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYK 156
Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
            +A+   +EV+ ++LLPE++WE+DL  +E L D+ TA +++ NP NPCG+VF+  HLQ+I
Sbjct: 157 TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKI 216
Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
             +A +  V ++ADE+YG + F    Y P+    + VP+++ G ++KRWLVPGWR GW++
Sbjct: 217 LAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWIL 276
Query: 266 TNDPNGIFQKSGIIDSIKDCLSIYSDI----PTFIQGAIPQILEKTKEDFFCKLIDTLRE 321
            +D   IF      + I+D L   S       T +QGA+  IL +T  +F+   +  L+ 
Sbjct: 277 IHDRRDIFG-----NEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKS 331
Query: 322 SAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
           +A++CY  +  IP +  P +P G+M  MV +      +  +D+EF  +L  E+SV   P 
Sbjct: 332 NADLCYGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPA 390
Query: 382 IYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
                 N++R+        + +   R++ FC++H
Sbjct: 391 TCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQH 424

>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From Trypanosoma Cruzi Length = 416

Iteration: 1
 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 192/386 (49%), Gaps = 15/386 (3%)
Query: 41  PRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRD 100
           P+P++ L  GDPT      T             S + N Y    G P AR A+A +    
Sbjct: 32  PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNS 91
Query: 101 LPYK------LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE 154
             +K      +  D+V +  G    + + ++ +   G   L+P+PG+P+YE + +   + 
Sbjct: 92  FVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIG 151
Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +  ++  PE +WE DLD +  L D  T  +++ NP NPCG+ F+  H+++I  +A +LR+
Sbjct: 152 MHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRL 211
Query: 215 MVVADEVYGHLTF-GSIP---YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270
            + +DE+Y  + F G  P   +T +  F + VP + LG  +   +VPGWR GWL+  DP+
Sbjct: 212 PLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPH 271
Query: 271 GIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
           G       ++ +K    +     T +Q A+ + L  T ++   +++  + ESA   Y+ +
Sbjct: 272 G--NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHI 329
Query: 331 KEIPCIS-CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNW 389
            E  CI   P  P G+M  M +++     DI  D+EF  KL +EE+V V PG       +
Sbjct: 330 GE--CIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGF 387
Query: 390 LRIAFCAEPSALKDGLGRMKAFCQRH 415
            R+         ++ + R+KAFCQRH
Sbjct: 388 TRLTTTRPVEVYREAVERIKAFCQRH 413

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score =  138 bits (347), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 169/383 (44%), Gaps = 24/383 (6%)
Query: 44  VVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
           V+ L  GDP  F  F+             + G  N Y  + G+P  R+AI +   R    
Sbjct: 40  VIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGV 97
Query: 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163
            ++ DDV VT    +A+++I   L  PG  +L+P P +P Y G+ +    +   +  + E
Sbjct: 98  DITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEE 157
Query: 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223
            +W+ D+D +       T A+ +INP NP G ++    L+EI  +A +  + V++DE+Y 
Sbjct: 158 EDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYD 217
Query: 224 HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP-NGIFQKSGIID-- 280
            +T+     +P G     VPVI +  +SK +   GWR G++   DP N + +    ID  
Sbjct: 218 LMTYEGEHISP-GSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRL 276
Query: 281 -SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP 339
             I+ C +  +          P        D+  + +  L+E  +  Y  + EIP IS  
Sbjct: 277 ARIRLCPNTPAQFAAIAGLTGPM-------DYLKEYMKKLKERRDYIYKRLNEIPGIST- 328
Query: 340 NKPEGSMVTM--VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC 395
            KP+G+      +++ PW      +D EF L +     V+   G   G       R  F 
Sbjct: 329 TKPQGAFYIFPKIEVGPW-----KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 383
Query: 396 AEPSALKDGLGRMKAFCQRHTKK 418
                L++ + R + F +   K+
Sbjct: 384 PPIEILEEAMDRFEKFMKERLKE 406

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 169/403 (41%), Gaps = 33/403 (8%)
Query: 19  AAPAVTVKTSLASIIDS---VNKNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSG 75
           AA   +V  S+  IID+     K +   V     G+P     F T              G
Sbjct: 4   AARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG 59
Query: 76  KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL 135
           K   Y   +G P  R AIA  L RD      AD++ VT G KQ++  ++  +  PG  V+
Sbjct: 60  KTR-YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVI 118
Query: 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195
           +P P W  Y  + +  +          E  ++V  + +       T  +V   P NP G 
Sbjct: 119 IPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGM 178
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG--SIVPVITLGSISKR 253
           V+T   ++ IA++A +  + V++DE+Y  + +    +  +G     +    +     +K 
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238
Query: 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY----SDIPTFIQ-GAIPQILEKTK 308
           + + GWR G+L           +G +  +K    I     S++ TF Q GAI     +  
Sbjct: 239 YAMTGWRVGFL-----------AGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAY--ENS 285
Query: 309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFAL 368
           +D   +++    E      D +  +P + CP KP+G+      + P + +     ++F  
Sbjct: 286 QDCVQEMLAAFAERRRYMLDALNAMPGLECP-KPDGAFY----MFPSIAKTGRSSLDFCS 340
Query: 369 KLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF 411
           +L  +  V   PG   G  + +R+++  +   +K G+ R++ F
Sbjct: 341 ELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKF 383

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 151/346 (43%), Gaps = 45/346 (13%)
Query: 75  GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134
           G+ + YA  +G+P  R A+A+       + +  + V VT G  +A+ V+L  L  PG  V
Sbjct: 52  GRQDQYAPPAGLPALREALAE------EFAVEPESVVVTSGATEALYVLLQSLVGPGDEV 105
Query: 135 LLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192
           ++  P +  Y  +      +  +   DL PE  + +DL A+E      T A+++  P NP
Sbjct: 106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNP 164
Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP-----YTPMGLFGSIVPVITL 247
            G VF    L+ IA +AR   + +++DEVY  L +G  P     + P   F       T+
Sbjct: 165 TGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTF-------TV 217
Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILE-K 306
           GS  KR    G+R GW+V   P     +   +  ++   S  +  PT +Q  + + L+  
Sbjct: 218 GSAGKRLEATGYRVGWIV--GPKEFMPR---LAGMRQWTSFSA--PTPLQAGVAEALKLA 270
Query: 307 TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEF 366
            +E F+  L +  R   ++   G++ +        PEG+   M +L  W           
Sbjct: 271 RREGFYEALREGYRRRRDLLAGGLRAMGLRVY--VPEGTYFLMAELPGW----------D 318
Query: 367 ALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRM 408
           A +L +E  V + P     L    K+  R AFC     L   L R+
Sbjct: 319 AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERL 364

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 165/381 (43%), Gaps = 39/381 (10%)
Query: 38  KNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYL 97
           +++ + V+ L  G+P     F T            + GK   Y  + GI   R  I++  
Sbjct: 25  ESEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEGK-THYTDSRGILELREKISELY 79
Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
                  +  D++ +T G    +   LS +   G  VL+  P +P Y+   +    +   
Sbjct: 80  KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVF 139
Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
            D   E          EAL+DK T A++I +P NP G V      +EI E A +    ++
Sbjct: 140 CDFTVE-------SLEEALSDK-TKAIIINSPSNPLGEVID----REIYEFAYENIPYII 187
Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
           +DE+Y  L +    Y+ +    ++   I +   S  + + GWR G++++ND         
Sbjct: 188 SDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISNDE-------- 239
Query: 278 IIDSI-KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCI 336
           II++I K   +++   PT  Q A  +  EK  E     +I        +    VK+    
Sbjct: 240 IIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGW- 298
Query: 337 SCPNKPEGSMVTMVKLNPWLLEDINDD-IEFALKLAKEESVIVTPGIYVGL--KNWLRIA 393
              N P G+         ++  +I +D  EFA KL KE+ V +TPGI  G   KN++RI+
Sbjct: 299 -EVNNPIGAY--------YVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRIS 349
Query: 394 FCAEPSALKDGLGRMKAFCQR 414
           +      +K+GL R+K F  +
Sbjct: 350 YANSYENIKEGLERIKEFLNK 370

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 169/380 (44%), Gaps = 37/380 (9%)
Query: 42  RPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDL 101
           + V+ LG G+P     F T              G    Y  N G+   R AIA+ L +  
Sbjct: 26  KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQ- 79
Query: 102 PYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEV 155
              + AD   ++ V LG  QA  + LS   + G  VL+P P +  Y     +A  K VEV
Sbjct: 80  -NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV 138
Query: 156 RHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215
             ++   E  + +++D ++      T A++I +P NP G V T   L+EIA+   +  ++
Sbjct: 139 PTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLI 195
Query: 216 VVADEVYGHLTFGSI-PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
           V++DEVY H  +     Y+   L G     IT+   SK + + GWR G++          
Sbjct: 196 VISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA-------- 247
Query: 275 KSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV-KE 332
            S II+ +       +  P TFIQ A  + L   K++   K ++ +R+  +     V K 
Sbjct: 248 PSWIIERMVKFQMYNATCPVTFIQYAAAKAL---KDERSWKAVEEMRKEYDRRRKLVWKR 304
Query: 333 IPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNW 389
           +  +  P  KP+G+        P + +      +F+  + KE  V V PG   G   + +
Sbjct: 305 LNEMGLPTVKPKGAFYIF----PRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGY 360
Query: 390 LRIAFCAEPSALKDGLGRMK 409
           +RI++      L++ + RM+
Sbjct: 361 VRISYATAYEKLEEAMDRME 380

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 169/380 (44%), Gaps = 37/380 (9%)
Query: 42  RPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDL 101
           + V+ LG G+P     F T              G    Y  N G+   R AIA+ L +  
Sbjct: 25  KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQ- 78
Query: 102 PYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEV 155
              + AD   ++ V LG  QA  + LS   + G  VL+P P +  Y     +A  K VEV
Sbjct: 79  -NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV 137
Query: 156 RHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215
             ++   E  + +++D ++      T A++I +P NP G V T   L+EIA+   +  ++
Sbjct: 138 PTYE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLI 194
Query: 216 VVADEVYGHLTFGSI-PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
           V++DEVY H  +     Y+   L G     IT+   SK + + GWR G++          
Sbjct: 195 VISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA-------- 246
Query: 275 KSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV-KE 332
            S II+ +       +  P TFIQ A  + L   K++   K ++ +R+  +     V K 
Sbjct: 247 PSWIIERMVKFQMYNATCPVTFIQYAAAKAL---KDERSWKAVEEMRKEYDRRRKLVWKR 303
Query: 333 IPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNW 389
           +  +  P  KP+G+        P + +      +F+  + KE  V V PG   G   + +
Sbjct: 304 LNEMGLPTVKPKGAFYIF----PRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGY 359
Query: 390 LRIAFCAEPSALKDGLGRMK 409
           +RI++      L++ + RM+
Sbjct: 360 VRISYATAYEKLEEAMERME 379

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 139/334 (41%), Gaps = 20/334 (5%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y    GI   R  IA  +       +S D V VT G KQA+      L  PG  V++  P
Sbjct: 74  YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            W  Y          V   +    +N++  L+ VE L    T A++I +P NP G V+  
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259
             L+ +  +A+K    +++DEVY  L +     + + +      ++ +   SK   + GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 260 RFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319
           R G+L++++       S I      C      I T  Q A  + LE         ++ T 
Sbjct: 254 RVGYLISSEKVAT-AVSKIQSHTTSC------INTVAQYAALKALEVDN----SYMVQTF 302
Query: 320 RESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379
           +E      + +K++       +PEG+     K+         DD++F  +L +E+ V + 
Sbjct: 303 KERKNFVVERLKKMGVKFV--EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALV 353
Query: 380 PGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ 413
           PG       ++R++F      L + L R++ F  
Sbjct: 354 PGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 148/342 (43%), Gaps = 28/342 (8%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           YA  +GIP  R A+A+   R+    ++ ++  VT+G KQA+  +   +  PG  V++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            W  Y  + +     V   + LPE  +  D + V       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
             L+ +A +A +    +V+DE+Y HL +    ++P    G + P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIK----DCLSIYSDIPTFI-QGAIPQILEKTKEDFF 312
           GWR G+     P  + +    + S      D ++ ++ +     Q A    +E  +E + 
Sbjct: 240 GWRIGYAC--GPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY- 296
Query: 313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAK 372
                  R   ++  +G+  +   +   +P G+   ++  +P       D++  A +L  
Sbjct: 297 -------RRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPI----APDEVRAAERLL- 342
Query: 373 EESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414
           E  V V PG        +R+++      L+  L R      R
Sbjct: 343 EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 147/342 (42%), Gaps = 28/342 (8%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           YA  +GIP  R A+A+   R+    ++ ++  VT+G  QA+  +   +  PG  V++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            W  Y  + +     V   + LPE  +  D + V       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
             L+ +A +A +    +V+DE+Y HL +    ++P    G + P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIK----DCLSIYSDIPTFI-QGAIPQILEKTKEDFF 312
           GWR G+     P  + +    + S      D ++ ++ +     Q A    +E  +E + 
Sbjct: 240 GWRIGYAC--GPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY- 296
Query: 313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAK 372
                  R   ++  +G+  +   +   +P G+   ++  +P       D++  A +L  
Sbjct: 297 -------RRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPI----APDEVRAAERLL- 342
Query: 373 EESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414
           E  V V PG        +R+++      L+  L R      R
Sbjct: 343 EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 149/351 (42%), Gaps = 45/351 (12%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y    G P  +++++   +   P     + +  T G   A  ++L  L  PG +V+   P
Sbjct: 59  YGWIEGSPAFKKSVSQLYTGVKP-----EQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            +     I +    EV  + +  E  W  DL+ +  L    T  + I N  NP G V   
Sbjct: 114 TYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDR 173
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV----ITLGSISKRWL 255
            +L+E+ E+A ++   +++DEVY   +   +P        SI+ V    I + S+S  + 
Sbjct: 174 TYLEELVEIASEVGAYILSDEVYRSFSELDVP--------SIIEVYDKGIAVNSLSXTYS 225
Query: 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKD----CLSIYSDIPTFIQGAIPQ-ILEKTKED 310
           +PG R GW+  N      Q + I+   +D    C  ++ D+   +  A  Q ILE+ +  
Sbjct: 226 LPGIRIGWVAAN-----HQVTDILRDYRDYTXICAGVFDDLVAQLALAHYQEILERNRH- 279
Query: 311 FFCKLIDTLRESAEICYDGVKEIPCISC--PNKPEGSMVTMVKLNPWLLEDINDDIEFAL 368
                   L E+  I    ++E P +S   P     S V +    P   ED      F L
Sbjct: 280 -------ILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDXP--XED------FCL 324
Query: 369 KLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           +L +E  V++ PG       ++R+ F  E   L  GL ++  F +R  K++
Sbjct: 325 QLLQEHGVLLVPGNRFERDGYVRLGFACEQETLIKGLEKLSQFLRRFDKEN 375

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 146/336 (43%), Gaps = 28/336 (8%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           YA  +GIP  R A+A+   R+    ++ ++  VT+G KQA+  +   +  PG  V++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            W  Y  + +     V   + LPE  +  D + V       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
             L+ +A +A +    +V+DE+Y HL +    ++P    G + P   +T+   +  + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAMT 239
Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIK----DCLSIYSDIPTFI-QGAIPQILEKTKEDFF 312
           GWR G+     P  + +    + S      D ++ ++ +     Q A    +E  +E + 
Sbjct: 240 GWRIGYAC--GPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY- 296
Query: 313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAK 372
                  R   ++  +G+  +   +   +P G+   ++  +P       D++  A +L  
Sbjct: 297 -------RRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPI----APDEVRAAERLL- 342
Query: 373 EESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRM 408
           E  V V PG        +R+++      L+  L R 
Sbjct: 343 EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERF 378

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 22/339 (6%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           YA  +GIP  R A+A+   R+    ++ ++  VT+G  QA+  +   +  PG  V++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            W  Y  + +     V   + LPE  +  D + V       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
             L+ +A +A +    +V+DE+Y HL +    ++P    G + P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL--EKTKEDFFCKL 315
           GWR G+     P  + +    + S+    +   D  T  Q A  + L  ++    F    
Sbjct: 240 GWRIGYAC--GPKEVIKA---MASVSRQSTTSPD--TIAQWATLEALTNQEASRAFVEMA 292
Query: 316 IDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375
            +  R   ++  +G+  +   +   +P G+   ++  +P       D++  A +L  E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPI----APDEVRAAERLL-EAG 345
Query: 376 VIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414
           V V PG        +R+++      L+  L R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 22/339 (6%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           YA  +GIP  R A+A+   R+    ++ ++  VT+G  QA+  +   +  PG  V++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            W  Y  + +     V   + LPE  +  D + V       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
             L+ +A +A +    +V+DE+Y HL +    ++P    G + P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL--EKTKEDFFCKL 315
           GWR G+     P  + +    + S+    +   D  T  Q A  + L  ++    F    
Sbjct: 240 GWRIGYAC--GPKEVIKA---MASVSRQSTTSPD--TIAQWATLEALTNQEASRAFVEMA 292
Query: 316 IDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375
            +  R   ++  +G+  +   +   +P G+   ++  +P       D++  A +L  E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPI----APDEVRAAERLL-EAG 345
Query: 376 VIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414
           V V PG        +R+++      L+  L R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 22/339 (6%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           YA  +GIP  R A+A+   R+    ++ ++  VT+G  QA+  +   +  PG  V++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            W  Y  + +     V   + LPE  +  D + V       T A+V+ +P NP G V+  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVP 257
             L+ +A +A +    +V+DE+Y HL +    ++P    G + P   +T+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL--EKTKEDFFCKL 315
           GWR G+     P  + +    + S+    +   D  T  Q A  + L  ++    F    
Sbjct: 240 GWRIGYAC--GPKEVIKA---MASVSRQSTTSPD--TIAQWATLEALTNQEASRAFVEMA 292
Query: 316 IDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375
            +  R   ++  +G+  +   +   +P G+   ++  +P       D++  A +L  E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPI----APDEVRAAERLL-EAG 345
Query: 376 VIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414
           V V PG        +R+++      L+  L R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/354 (22%), Positives = 156/354 (44%), Gaps = 43/354 (12%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP-R 138
           Y +  G    R AIA++L+       +AD++Y T G   ++ +    L     +  +   
Sbjct: 72  YTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIA 131
Query: 139 PGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195
           P +P Y+     A  + VEV         ++++D DA+E   + +T  ++I +P NP G 
Sbjct: 132 PYFPEYKVFVNAAGARLVEVP----ADTEHFQIDFDALEERINAHTRGVIINSPNNPSGT 187
Query: 196 VFTYHHLQEIAEMARKLR------VMVVADEVYGHLTFGSI--PYTPMGLFGSIVPVITL 247
           V++   +++++++  K        + ++ADE Y  + +  I  P+       ++V     
Sbjct: 188 VYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCY--- 244
Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILE 305
            S SK   +PG R G+++   P+ ++ K+ +  ++        Y   P+  Q  I +   
Sbjct: 245 -SYSKSLSLPGERIGYVLV--PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKCQG 301
Query: 306 KTKEDFFCKLIDTLRESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDD 363
            T +      I+  +E+ ++ Y+G+  I   C     KP+G+    VK        + DD
Sbjct: 302 ATGD------INAYKENRDLLYEGLTRIGYHCF----KPDGAFYXFVKA-------LEDD 344
Query: 364 IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
                + AKEE V++      G   W+RI++C +   +K      +   +++ K
Sbjct: 345 SNAFCEKAKEEDVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYKKYNK 398

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 148/364 (40%), Gaps = 64/364 (17%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y+ ++GI   R A A Y  R     +  ++V VT G  +A+    +V+A PG  +L+  P
Sbjct: 75  YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
            +  Y   A+   V++       E  + +  + +E+  ++ T  +V+ NP NP G V+  
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIPQN-LESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRW 254
              + + E+A +  + ++ DEVY  + F        G F S +      V+ + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI-PQILEKT------ 307
              G R G L+T +   I                 S      QG + P +LE+       
Sbjct: 247 SACGARVGCLITRNEELI-----------------SHAXKLAQGRLAPPLLEQIGSVGLL 289
Query: 308 --KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL--------NPWLL 357
              + FF  + +T RE  E     ++E   +    KP G+     +L          W L
Sbjct: 290 NLDDSFFDFVRETYRERVETVLKKLEE-HGLKRFTKPSGAFYITAELPVEDAEEFARWXL 348
Query: 358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGR--------MK 409
            D N D E    +A      +TPG+    K  +RIA   E    KD L R        +K
Sbjct: 349 TDFNXDGE-TTXVAPLRGFYLTPGLG---KKEIRIACVLE----KDLLSRAIDVLXEGLK 400
Query: 410 AFCQ 413
            FC 
Sbjct: 401 XFCS 404

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 133/335 (39%), Gaps = 50/335 (14%)
Query: 78  NCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLL 136
           N YA  +G+   R AIA    R   Y+  AD D+ VT G  +A+   ++ L R G  V+ 
Sbjct: 61  NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 137 PRPGWPYYE-------GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189
             P +  Y        GI +R  ++  HF         VD     AL  + T  +++  P
Sbjct: 121 FDPSYDSYAPAIALSGGIVKRMALQPPHF--------RVDWQEFAALLSERTRLVILNTP 172
Query: 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLG 248
            NP   V+       + +      + V++DEVY H+ F    +  +     +    + + 
Sbjct: 173 HNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVS 232
Query: 249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK 308
           S  K + + GW+ G+ V   P      S  I  +   L+   + P   Q A+  +L    
Sbjct: 233 SFGKTYHMTGWKVGYCVAPAP-----ISAEIRKVHQYLTFSVNTPA--QLALADMLRAEP 285
Query: 309 EDFFCKLIDTLRESAEICYDGVKE-----IPCISCPNKPEGSMVTMVKLNPWLLEDINDD 363
           E +   L D  R+  +I  + + E     +PC       EG+   +V  +        DD
Sbjct: 286 EHYLA-LPDFYRQKRDILVNALNESRLEILPC-------EGTYFLLVDYSA---VSTLDD 334
Query: 364 IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEP 398
           +EF   L +E  V   P         L + FCA+P
Sbjct: 335 VEFCQWLTQEHGVAAIP---------LSV-FCADP 359

>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp Length = 498

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 162/367 (44%), Gaps = 37/367 (10%)
Query: 80  YATNSGIPPARRAIADYLSR-DLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN----V 134
           Y+ + G+   R  +A Y++R D       D++Y+T G    +  IL +L   G      V
Sbjct: 125 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGV 184
Query: 135 LLPRPGWPYYEG-IAQRKQVEVRHFDLLPERNWEVDLD----AVEALADK-NTAAMVIIN 188
           ++P P +P Y   I++   ++V ++ L  E  W ++++    AV+   D  +   + IIN
Sbjct: 185 MIPIPQYPLYSAVISELDAIQVNYY-LDEENCWALNVNELRRAVQEAKDHCDPKVLCIIN 243
Query: 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG---------HLTFGSIPYTPMGLFG 239
           PGNP G V +   ++++   A + ++ ++ADEVY            +F  + Y     + 
Sbjct: 244 PGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303
Query: 240 SIVPVITLGSISKRWLVP-GWRFGWL-VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQ 297
           S V + +  S SK ++   G+R G++ V N    I  +   + S++ C  +       I 
Sbjct: 304 SNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIV 363
Query: 298 GAIPQILEKTKEDFFCK---LIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL-- 352
              P   E++ E F  +   ++  L + A++  D   ++P I C N  +G+M    ++  
Sbjct: 364 VNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHC-NPLQGAMYAFPRIFI 422
Query: 353 -----NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKN---WLRIAFCAEPSALKDG 404
                       +  D+ + +KL +E  + V PG   G +      R+        LK  
Sbjct: 423 PAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTV 482
Query: 405 LGRMKAF 411
           L ++K F
Sbjct: 483 LQKVKDF 489

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 10/227 (4%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWE 167
           +V VT+G  +A+   +  L  PG+ VLL  P +  Y  +            L+P+ R + 
Sbjct: 88  EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFA 147
Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF 227
           +D DA+       T A++I +P NP G V +   L  IAE+A    ++V+ DEVY HL F
Sbjct: 148 LDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVF 207
Query: 228 GSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286
               + P+  F G     IT+ S +  +   GW+ GW       G  +    + + K  L
Sbjct: 208 DHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWAC-----GPAELIAGVRAAKQYL 262
Query: 287 SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333
           S     P   Q A+   L+ T++ +   L ++LR   +    G+ EI
Sbjct: 263 SYVGGAP--FQPAVALALD-TEDAWVAALRNSLRARRDRLAAGLTEI 306

>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase (Msat) From Thermococcus Profundus Length = 417

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 145/357 (40%), Gaps = 39/357 (10%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y T  G  P R A+A ++ +     +S  ++    G +QA+++I  V   PG  +++  P
Sbjct: 79  YGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAP 138
Query: 140 GWPYYEGIAQRKQVEVRHFDL-LPERNWEVDLDAVEALADKNTAAMVII-----NPGNPC 193
              Y   I   K  +     + L ++   VDL   +    +     V I        NP 
Sbjct: 139 T--YLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPA 196
Query: 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR 253
           G   +    +++ E+A +   ++V D  Y  L +   P  P+  F     VI LG+ SK 
Sbjct: 197 GVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK- 255
Query: 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPT-------FIQGAIPQILEK 306
            L PG+R GW V   P+ I +      SI  C + +            ++   IP+I+E 
Sbjct: 256 ILAPGFRIGW-VAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIE- 313
Query: 307 TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEF 366
               F+    D + E+ E      + +P      KPEG M   V L   +      D + 
Sbjct: 314 ----FYKPRRDAMLEALE------EYMPEGVEWTKPEGGMFVRVTLPEGI------DTKL 357
Query: 367 ALKLAKEESVIVTPG----IYVGLKNWLRIAFCAEP-SALKDGLGRMKAFCQRHTKK 418
            ++ A  + V   PG    ++   KN +R+ F   P   +++G+ R+    +   K+
Sbjct: 358 MMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMKR 414

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 154/364 (42%), Gaps = 56/364 (15%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPR 138
           Y T  G  P R  +  +L +   Y +S D D+ +T G +QA+++I  V   PG  V++  
Sbjct: 69  YGTTKGFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEA 126
Query: 139 P-------GWPYYEGIAQRKQV----EVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187
           P        + +YE   Q  Q+    E    ++L E+     L  +++   K      + 
Sbjct: 127 PTYLAALQAFNFYE--PQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVP 179
Query: 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247
              NP G        + + E+A +   +VV D+ YG L +   P   +    +   VI L
Sbjct: 180 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYL 239
Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-CLSIYSDIPT-------FIQGA 299
           G+ SK  L PG+R GW+V  DP GI +K  I     D C +++  +         +++  
Sbjct: 240 GTFSK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKH 296
Query: 300 IPQILEKTKEDFFCKLIDTLRES-AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358
           IP+I       F+    D + E+  E   +GVK         KPEG M   V L   +  
Sbjct: 297 IPEI-----RKFYKPRRDAMLEALEEFMPEGVKW-------TKPEGGMFIWVTLPDGI-- 342
Query: 359 DINDDIEFALKLAKEESVIVTPG----IYVGLKNWLRIAFC-AEPSALKDGLGRMKAFCQ 413
               D +  L+ A ++ V   PG     +  +KN +R+ F   +   + +G+ R+    +
Sbjct: 343 ----DSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIK 398
Query: 414 RHTK 417
              K
Sbjct: 399 EELK 402

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 154/364 (42%), Gaps = 56/364 (15%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPR 138
           Y T  G  P R  +  +L +   Y +S D D+ +T G +QA+++I  V   PG  V++  
Sbjct: 114 YGTTKGFTPLRETLMKWLGKR--YGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEA 171
Query: 139 P-------GWPYYEGIAQRKQV----EVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187
           P        + +YE   Q  Q+    E    ++L E+     L  +++   K      + 
Sbjct: 172 PTYLAALQAFNFYE--PQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVP 224
Query: 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247
              NP G        + + E+A +   +VV D+ YG L +   P   +    +   VI L
Sbjct: 225 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYL 284
Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-CLSIYSDIPT-------FIQGA 299
           G+ SK  L PG+R GW+V  DP GI +K  I     D C +++  +         +++  
Sbjct: 285 GTFSK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKH 341
Query: 300 IPQILEKTKEDFFCKLIDTLRES-AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358
           IP+I       F+    D + E+  E   +GVK         KPEG M   V L   +  
Sbjct: 342 IPEI-----RKFYKPRRDAMLEALEEFMPEGVKW-------TKPEGGMFIWVTLPDGI-- 387
Query: 359 DINDDIEFALKLAKEESVIVTPG----IYVGLKNWLRIAFC-AEPSALKDGLGRMKAFCQ 413
               D +  L+ A ++ V   PG     +  +KN +R+ F   +   + +G+ R+    +
Sbjct: 388 ----DSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIK 443
Query: 414 RHTK 417
              K
Sbjct: 444 EELK 447

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 146/368 (39%), Gaps = 51/368 (13%)
Query: 78  NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137
           N Y+   G P    ++    S     +L A++V VT G  + +   L  L   G  V++ 
Sbjct: 89  NQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVF 148
Query: 138 RPGWPYYEGIAQRKQVEVRHFDLLP-----ERN-----WEVDLDAVEALADKNTAAMVII 187
            P +  Y    +    +V +  + P     +RN     W +D +  E      T A++I 
Sbjct: 149 EPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN 208
Query: 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247
            P NP G VFT   L  +  +  K  V++++DEVY HL F    +T +      +  +TL
Sbjct: 209 TPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTL 267
Query: 248 --GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL- 304
             GS    +   GWR GW+++   N            + C +  S +      +I   L 
Sbjct: 268 TVGSAGXSFAATGWRIGWVLS--LNAELLSYAAKAHTRICFASPSPLQEACANSINDALK 325
Query: 305 ----EKTKEDFF--CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN----- 353
               EK ++++    K+  ++ +   + Y              PEG+   +V  +     
Sbjct: 326 IGYFEKMRQEYINKFKIFTSIFDELGLPYTA------------PEGTYFVLVDFSKVKIP 373
Query: 354 ---PWLLEDINDDIEFALK--LAKEESVIVTPGIYVGLK-------NWLRIAFCAEPSAL 401
              P+  E +N   +F +   L  E  V+  P     +K       N LR A C + + L
Sbjct: 374 EDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYL 433
Query: 402 KDGLGRMK 409
           ++ + R+K
Sbjct: 434 ENAVERLK 441

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 78  NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARPGANVLL 136
           N Y    G P   +A++   S+ +   ++   +V VT+G  +A+   +      G  V++
Sbjct: 71  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 137 PRPGWPYYEGIAQRKQVEVRHFDLLPER--------NWEVDLDAVEALADKNTAAMVIIN 188
             P +  YE + +      R   L P +        +W +D + +EAL ++ T  ++I  
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITL 247
           P NP G V     L+ +A + +K  V+ V+DEVY H+ F    +  +  L G     IT+
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI 250
Query: 248 GSISKRWLVPGWRFGW 263
           GS  K + + GW+ GW
Sbjct: 251 GSAGKTFSLTGWKIGW 266

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 35/256 (13%)
Query: 74  SGKF--NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARP 130
           SG F  N Y    G PP  + +A +    L  ++    +V VT+G   A+      L   
Sbjct: 55  SGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDE 114
Query: 131 GANVLLPRPGWPYYEGIAQR----------KQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           G  V++  P +  YE +             K   +++ +L    NW++D   +       
Sbjct: 115 GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR 174
Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY--------GHLTFGSIPY 232
           T A+V+  P NP G VF+   L+ +A + ++  V+ + DEVY         H++  S+P 
Sbjct: 175 TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLP- 233
Query: 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI 292
                 G     +T+GS  K +   GW+ GW++  D      ++   +S+  C       
Sbjct: 234 ------GMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHC------- 280
Query: 293 PTFIQGAIPQILEKTK 308
           PT  Q A+ +  E+ +
Sbjct: 281 PTQSQAAVAESFEREQ 296

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 153/346 (44%), Gaps = 28/346 (8%)
Query: 78  NCYATNSGIPPARRAIADYLSRDLPYKLSAD---DVYVTLGCKQAVEVILSVLARPGANV 134
           + Y+T+ GIP  RRAI+ +  RD  Y +  D   +  VT+G K+ +  ++      G  +
Sbjct: 69  HGYSTSRGIPRLRRAISHWY-RDR-YDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTI 126
Query: 135 LLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCG 194
           L+P P +P +   A     +VR   L+P  ++  +L+     +      M++  P NP  
Sbjct: 127 LVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTA 186
Query: 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF-GSIPYTPMGLFGSIVPVITLGSISKR 253
                   + +  +A++  VMVV D  Y  + + G    + M + G+    +   ++SK 
Sbjct: 187 QCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKS 246
Query: 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF--IQGAIPQILEKTKEDF 311
           + + GWR G++V N          ++ ++    S Y D  TF  +Q A    LE  ++  
Sbjct: 247 YNMAGWRIGFMVGN--------PELVSALARIKS-YHDYGTFTPLQVAAIAALEGDQQ-- 295
Query: 312 FC--KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALK 369
            C   +    ++  ++   G++E   +     P+ SM    K+ P     +   +EFA K
Sbjct: 296 -CVRDIARQYQQRRDVLVKGLREAGWMV--ENPKASMYVWAKI-PEPYAHLG-SLEFAKK 350
Query: 370 LAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKDGLGRMKAFCQ 413
           L ++  V V+PGI  G    + +R A       L+  +  +KA  +
Sbjct: 351 LLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFR 396

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 78  NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARPGANVLL 136
           N Y    G P   +A++   S+ +   ++   +V VT+G  +A+   +      G  V++
Sbjct: 71  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 137 PRPGWPYYEGIAQRKQVEVRHFDLLPER--------NWEVDLDAVEALADKNTAAMVIIN 188
             P +  YE + +      R   L P +        +W +D + +EAL ++ T  ++I  
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITL 247
           P NP G V     L+ +A + +K  V+ V+DEVY H+ F    +  +  L G     IT+
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI 250
Query: 248 GSISKRWLVPGWRFGW 263
           GS    + + GW+ GW
Sbjct: 251 GSAGXTFSLTGWKIGW 266

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 35/256 (13%)
Query: 74  SGKF--NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARP 130
           SG F  N Y    G PP  + +A +    L  ++    +V VT+G   A+      L   
Sbjct: 55  SGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDE 114
Query: 131 GANVLLPRPGWPYYEGIAQR----------KQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           G  V++  P +  YE +             K   +++ +L    NW++D   +       
Sbjct: 115 GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR 174
Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY--------GHLTFGSIPY 232
           T A+V+  P NP G VF+   L+ +A + ++  V+ + DEVY         H++  S+P 
Sbjct: 175 TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLP- 233
Query: 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI 292
                 G     +T+GS    +   GW+ GW++  D      ++   +S+  C       
Sbjct: 234 ------GMWERTLTIGSAGXTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHC------- 280
Query: 293 PTFIQGAIPQILEKTK 308
           PT  Q A+ +  E+ +
Sbjct: 281 PTQSQAAVAESFEREQ 296

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 35/256 (13%)
Query: 74  SGKF--NCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLARP 130
           SG F  N Y    G PP  + +A +    L  ++    +V VT+G   A+      L   
Sbjct: 55  SGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDE 114
Query: 131 GANVLLPRPGWPYYEGIAQR----------KQVEVRHFDLLPERNWEVDLDAVEALADKN 180
           G  V++  P +  YE +             K   +++ +L    NW++D   +       
Sbjct: 115 GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR 174
Query: 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY--------GHLTFGSIPY 232
           T A+V+  P NP G VF+   L+ +A + ++  V+ + DEVY         H++  S+P 
Sbjct: 175 TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLP- 233
Query: 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI 292
                 G     +T+GS    +   GW+ GW++  D      ++   +S+  C       
Sbjct: 234 ------GMWERTLTIGSAGXTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHC------- 280
Query: 293 PTFIQGAIPQILEKTK 308
           PT  Q A+ +  E+ +
Sbjct: 281 PTQSQAAVAESFEREQ 296

>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum Vulgare Length = 500

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 146/331 (44%), Gaps = 30/331 (9%)
Query: 79  CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-VLLP 137
            Y+ + GI   R AIA  ++    +  +ADD+++T G    V +++ +L R   + +L+P
Sbjct: 129 AYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVP 188
Query: 138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL-DAVEALADK-----NTAAMVIINPGN 191
            P +P Y          +  + L     W ++  D  + L D      N  A+V+INPGN
Sbjct: 189 IPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN 248
Query: 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH---------LTFGSIPYTPMGLFGSIV 242
           P G V    +  +I +  +   ++++ADEVY            +F  I  + +G     +
Sbjct: 249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRS-LGYGEEDL 307
Query: 243 PVITLGSISKRWLVP-GWRFGWL-VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
           P+++  S+SK +    G R G+  +T     + ++   I S+  C +I   I   +    
Sbjct: 308 PLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNP 367
Query: 301 PQILEKTKEDFFCK---LIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVK------ 351
           P+  +++   +  +   ++ +L   A+       ++  I+C N+ EG+M    +      
Sbjct: 368 PKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC-NEAEGAMYVFPQICLPQK 426
Query: 352 -LNPWLLEDINDDIEFALKLAKEESVIVTPG 381
            +      +   D  +AL+L +   ++V PG
Sbjct: 427 AIEAAKAANKAPDAFYALRLLESTGIVVVPG 457

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 153/358 (42%), Gaps = 47/358 (13%)
Query: 85  GIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           G+P  ++A+ D+++     K++ D   + +T G   A E  +  LA PG  VL+P P +P
Sbjct: 87  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 143 YYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVEAL---ADKNT---AAMVIINPGNPCGN 195
            ++  +  R  VE+          +++   A+E     A+K       +++ NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI---------- 245
             T + L  +        + +++DE+Y    F S        F S++ V+          
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS------FISVMEVLKDRNCDENSE 260
Query: 246 ------TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299
                  + S+SK   +PG+R G + +ND         ++ +    +S +  + +  Q  
Sbjct: 261 VWQRVHVVYSLSKDLGLPGFRVGAIYSNDD--------MVVAAATKMSSFGLVSSQTQHL 312
Query: 300 IPQIL--EKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357
           +  +L  +K  +++  +    L++  +    G+++   ISC N   G +   V +   L 
Sbjct: 313 LSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLR 370
Query: 358 EDIND-DIEFALKLAKEESVIVTPG--IYVGLKNWLRIAFCAEPSALKD-GLGRMKAF 411
            +  + ++E   K+  E  + ++PG   +     W R+ F   P    D  + R+KAF
Sbjct: 371 SNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428

>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase Length = 429

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 153/358 (42%), Gaps = 47/358 (13%)
Query: 85  GIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           G+P  ++A+ D+++     K++ D   + +T G   A E  +  LA PG  VL+P P +P
Sbjct: 85  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 144
Query: 143 YYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVEAL---ADKNT---AAMVIINPGNPCGN 195
            ++  +  R  VE+          +++   A+E     A+K       +++ NP NP G 
Sbjct: 145 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 204
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI---------- 245
             T + L  +        + +++DE+Y    F S        F S++ V+          
Sbjct: 205 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS------FISVMEVLKDRNCDENSE 258
Query: 246 ------TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299
                  + S+SK   +PG+R G + +ND         ++ +    +S +  + +  Q  
Sbjct: 259 VWQRVHVVYSLSKDLGLPGFRVGAIYSNDD--------MVVAAATKMSSFGLVSSQTQHL 310
Query: 300 IPQIL--EKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357
           +  +L  +K  +++  +    L++  +    G+++   ISC N   G +   V +   L 
Sbjct: 311 LSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLR 368
Query: 358 EDIND-DIEFALKLAKEESVIVTPG--IYVGLKNWLRIAFCAEPSALKD-GLGRMKAF 411
            +  + ++E   K+  E  + ++PG   +     W R+ F   P    D  + R+KAF
Sbjct: 369 SNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 426

>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine Length = 435

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 153/358 (42%), Gaps = 47/358 (13%)
Query: 85  GIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           G+P  ++A+ D+++     K++ D   + +T G   A E  +  LA PG  VL+P P +P
Sbjct: 87  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 143 YYE-GIAQRKQVEVRHFDLLPERNWEVDLDAVEAL---ADKNT---AAMVIINPGNPCGN 195
            ++  +  R  VE+          +++   A+E     A+K       +++ NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI---------- 245
             T + L  +        + +++DE+Y    F S        F S++ V+          
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS------FISVMEVLKDRNCDENSE 260
Query: 246 ------TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299
                  + S+SK   +PG+R G + +ND         ++ +    +S +  + +  Q  
Sbjct: 261 VWQRVHVVYSLSKDLGLPGFRVGAIYSNDD--------MVVAAATKMSSFGLVSSQTQHL 312
Query: 300 IPQIL--EKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357
           +  +L  +K  +++  +    L++  +    G+++   ISC N   G +   V +   L 
Sbjct: 313 LSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAG-LFCWVDMRHLLR 370
Query: 358 EDIND-DIEFALKLAKEESVIVTPG--IYVGLKNWLRIAFCAEPSALKD-GLGRMKAF 411
            +  + ++E   K+  E  + ++PG   +     W R+ F   P    D  + R+KAF
Sbjct: 371 SNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 47/339 (13%)
Query: 79  CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138
            Y   +GIP  R  +A +L +    ++S +++ +T+G   A++++  VL  PG  V+   
Sbjct: 70  MYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITEN 129
Query: 139 PGW-----PYYEGIAQRKQVEVRH----FDLLPERNWEVDLDAVEALADKNTAAMVIINP 189
           P +      + +  A+ + V V +     DLL E+  E     ++A   K      I   
Sbjct: 130 PSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKE-----LKAKGQKVKLIYTIPTG 184
Query: 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249
            NP G   +    + + E+A K  ++++ D  Y  + +      P+    +   VI  G+
Sbjct: 185 QNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGT 244
Query: 250 ISKRWLVPGWRFGWLVTNDP--NGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQI-LE- 305
           +SK  L  G+R GW++        +  +   ID     +S Y  +    +G   +  LE 
Sbjct: 245 LSK-VLGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEG 303
Query: 306 -----KTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360
                K K D   K ++    +AE                KP   M  M     + L + 
Sbjct: 304 ALLGYKEKRDIMLKALENHLPNAEFT--------------KPIAGMFVM-----FFLPEG 344
Query: 361 NDDIEFALKLAKEESVIVTPG--IYV--GLKNWLRIAFC 395
            D I FA +L + E V+V PG   Y     KN +R+ F 
Sbjct: 345 ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS 383

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 33/326 (10%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y+   G  P R  +A+++       +  ++V +T G +QA++++  V    G+ VLL  P
Sbjct: 70  YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG--NPCGNVF 197
               Y G  Q  +++   F  +P      DLDA+E +  +     + + P   NP G + 
Sbjct: 124 S---YMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYT-PMGLFGSIVPVITLGSISKRW 254
                + + +M  +  ++VV D+ Y  L FG   +P    +        VI LGS SK  
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCK 314
           L PG R  + V + P  + QK   +   K    +++  P   Q  + ++L++   +   +
Sbjct: 240 LSPGLRVAFAVAH-PEAL-QK---LVQAKQGADLHT--PMLNQMLVHELLKEGFSERLER 292
Query: 315 LIDTLRESAEICYDGV-KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE 373
           +    RE A+     + +E+P      +P+G M   ++L   L        E   + A E
Sbjct: 293 VRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGL------SAEGLFRRALE 346
Query: 374 ESVIVTPG----IYVGLKNWLRIAFC 395
           E+V   PG       G +N LR+++ 
Sbjct: 347 ENVAFVPGGPFFANGGGENTLRLSYA 372

>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C. 2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus Ncfm At 2.15 A Resolution Length = 533

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 93  IADYLSRDLPYK----LSADDVYVTLGCKQAVEVILSVLA-----RPGANVLLPRPGWPY 143
           I +Y  ++L YK        D++ T G   A+      LA     + G  + +  P +  
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 144 YEGIAQRKQVEVRHFDL--LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201
           Y  I + K  E+   DL    + +WE++ + +E L D +  A++++NP NP    F  + 
Sbjct: 206 YLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNA 265
Query: 202 LQEIAEMARKL-RVMVVADEVYGHL--TFGSIPYTPMGLFGSIVPVIT--LGSISKRWLV 256
           L  I +   K  ++ +++DEVYG     F SI         S+VP  T  + S S  +  
Sbjct: 266 LNAIKQAVEKNPKLXIISDEVYGAFVPNFKSIY--------SVVPYNTXLVYSYSXLFGC 317
Query: 257 PGWRFGWLVTNDPN 270
            GWR G +  N+ N
Sbjct: 318 TGWRLGVIALNEKN 331

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 77  FNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVL 135
            N Y    G P   +A++    +    ++   +++ V +G   ++   +  L  PG  V+
Sbjct: 54  MNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVI 113
Query: 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPER----------NWEVDLDAVEALADKNTAAMV 185
           +  P +  YE +  R    V  F  L  +          +W  D   +E+     T A++
Sbjct: 114 IMVPFYDCYEPMV-RMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAII 172
Query: 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-LFGSIVPV 244
           +  P NP G V+T   LQ IA++  K   + ++DEVY  L +    +  +  L G     
Sbjct: 173 LNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERT 232
Query: 245 ITLGSISKRWLVPGWRFGWLV 265
           IT+GS  K + V GW+ GW +
Sbjct: 233 ITIGSAGKTFSVTGWKLGWSI 253

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 77  FNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVL 135
            N Y    G P   +A++    +    ++   +++ V +G   ++   +  L  PG  V+
Sbjct: 54  MNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVI 113
Query: 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPER----------NWEVDLDAVEALADKNTAAMV 185
           +  P +  YE +  R    V  F  L  +          +W  D   +E+     T A++
Sbjct: 114 IMVPFYDCYEPMV-RMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAII 172
Query: 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-LFGSIVPV 244
           +  P NP G V+T   LQ IA++  K   + ++DEVY  L +    +  +  L G     
Sbjct: 173 LNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERT 232
Query: 245 ITLGSISKRWLVPGWRFGWLV 265
           IT+GS    + V GW+ GW +
Sbjct: 233 ITIGSAGXTFSVTGWKLGWSI 253

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 144/353 (40%), Gaps = 39/353 (11%)
Query: 85  GIPPARRAIADYL--SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142
           G+P  R+AIA ++  +R    +   + V +  G   A E I+  LA PG   L+P P +P
Sbjct: 84  GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 143 YY-EGIAQRKQVEVRHFDLLPERNWEVDLDAV-EALADKNTA-----AMVIINPGNPCGN 195
            +   +  R  V++         N+++   AV EA  +   +      +++ NP NP G 
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGT 203
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG--------LFGSIVPVITL 247
                 L+ +     +  + +V DE+Y    F +  +  +          + +   V  +
Sbjct: 204 TLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIV 263
Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQIL 304
            S+SK   +PG+R G + + +           D + +C   +S +  + T  Q  +  +L
Sbjct: 264 YSLSKDMGLPGFRVGIIYSFN-----------DDVVNCARKMSSFGLVSTQTQYFLAAML 312
Query: 305 --EKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIND 362
             EK  ++F  +    L +  +   +G+ E+  I C  K    +   + L P L E   D
Sbjct: 313 SDEKFVDNFLRESAMRLGKRHKHFTNGL-EVVGIKCL-KNNAGLFCWMDLRPLLRESTFD 370
Query: 363 -DIEFALKLAKEESVIVTPGIYVGLKN--WLRIAFCAEPSALKD-GLGRMKAF 411
            ++     +  +  + V+PG     +   W R+ F        D  L R++ F
Sbjct: 371 SEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF 423

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 80  YATNSGIPPARRAIADYLSRDLP-YKLSAD-DVYVTLGCKQAVEVILSVLARPGAN---- 133
           Y   +G+P  R+A A++L R      + AD ++   LG ++A+   +  +  P ++    
Sbjct: 62  YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 134 -VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192
            ++ P P +  YEG       E+ HF   P  ++  D  ++     K T  + + +P NP
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNP 180
Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-------LFGSIVPVI 245
            G+V      +E+ ++  K   ++ +DE Y  + F      P+G       L  S   ++
Sbjct: 181 SGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDG--NKPLGCLQAAAQLGRSRQKLL 238
Query: 246 TLGSISKRWLVPGWRFGWLVTN 267
              S+S R  VPG R G++  +
Sbjct: 239 XFTSLSXRSNVPGLRSGFVAGD 260

>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus Anginosus: Internal Aldimine Form Length = 392

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 91  RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---I 147
           +A+ D+   +  Y    +D+    G   A+ + +    + G  VL+  P +P +     +
Sbjct: 73  QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 148 AQRKQVEVRHFDLLPERN--WEVDLDAVEA-LADKNTAAMVIINPGNPCGNVFTYHHLQE 204
             RK V     + L E N  +++D + +E  + + +    ++ NP NP G V+    L++
Sbjct: 133 NNRKLVS----NSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQ 188
Query: 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGW 259
           I  + +K  V++V+DE++  LT     +     F ++ P      + L S +K + + G 
Sbjct: 189 IGHLCQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGT 245
Query: 260 RFGWLVTNDPN--GIFQKSGIIDSIKDCLSI 288
           +  + +  +P     F+   ++++  +  S+
Sbjct: 246 KNSYAIIENPTLCAQFKHQQLVNNHHEVSSL 276

>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans Length = 421

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 75  GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134
           G+ + +  N       +A+ D+  ++  Y +  +D+    G   A+ + L   +  G  V
Sbjct: 87  GREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAV 146
Query: 135 LLPRP-GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGNP 192
           L+  P  +P+   I       V +   +    +E+D + +E  + D N    ++ +P NP
Sbjct: 147 LINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNP 206
Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVP-VITLGSI 250
            G V+    L +IAE+ +K  V++V+DE++  L  FG+  ++   L  S     I L S 
Sbjct: 207 GGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSA 266
Query: 251 SKRWLVPG 258
           +K + + G
Sbjct: 267 TKTFNIAG 274

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWE 167
           +    +G ++ +  +L  L  P   +LLP   +P Y G A  +   +R F L+P R +  
Sbjct: 89  EALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAA--RVASLRTF-LIPLREDGL 145
Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF 227
            DL AV     +    +++  P NP G V  + + +E   +ARK  + ++ D  Y    +
Sbjct: 146 ADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVY 205
Query: 228 GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
                +P+ L G+   V+ L S+SK + + G+R G+ + ++
Sbjct: 206 EGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246

>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 129/316 (40%), Gaps = 49/316 (15%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
           D+ VT G +Q +  +  ++  PG NVLL  P    Y G  Q           V      +
Sbjct: 110 DLCVTSGSQQGLXKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +P+        W+ + DA     +       + N  NP GN  T    +EI E+ARK   
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTF--GSIP-YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
           +++ D+ Y  L F  G +P +  M + G ++   +   I    +  G R G+L    P  
Sbjct: 226 LIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP-- 279
Query: 272 IFQKSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
                 +I+ +   + + +  P TF Q  I Q+L +  E+ F   +D + +      D +
Sbjct: 280 ------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAI 333
Query: 331 -----KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG--IY 383
                K +  ++  + P   M   +K     ++ IND  E   + A +  V++ PG   Y
Sbjct: 334 LAAADKWLTGLAEWHVPAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPGNAFY 388
Query: 384 VGLKN---WLRIAFCA 396
           V       +LR +F +
Sbjct: 389 VDSSAPSPYLRASFSS 404

>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola Contains A Pyridoxal 5'-Phosphate Cofactor Length = 399

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP-GWPYYEGIA 148
           ++ +  ++     + +  D +  T G   AV   +    +PG  V++  P  +P++  I 
Sbjct: 72  KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK 131
Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207
            +++  +    L  +  + +D   +E L+ DKN  A++  +P NP G V+    LQ+I +
Sbjct: 132 NQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKD 191
Query: 208 MARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-----VPVITLGSISKRWLVPGWRFG 262
           +  K  +M+ +DE++  L      +T   +F SI        IT  + SK + + G    
Sbjct: 192 IVLKSDLMLWSDEIHFDLIMPGYEHT---VFQSIDEQLADKTITFTAPSKTFNIAGMGMS 248
Query: 263 WLVTNDPN 270
            ++  +P+
Sbjct: 249 NIIIKNPD 256

>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent Aminotransferase (Lbul_1103) From Lactobacillus Delbrueckii Subsp. At 1.61 A Resolution Length = 391

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 91  RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR 150
           +A+AD+   +   +   D      G   A+   +     PG  +L+  P +  +  + + 
Sbjct: 69  KAVADWEEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEG 128
Query: 151 KQVEVRHFDLLPER-----NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
               V   DL+ E      NW    D  E LA  +    V  NP NP G  ++   ++ I
Sbjct: 129 NGRRVISSDLIYENSKYSVNW---ADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRI 185
Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV 256
           AE+  K +V++++DE++G L               I P  T+   +K W+V
Sbjct: 186 AELCAKHQVLLISDEIHGDLVLTD---------EDITPAFTVDWDAKNWVV 227

>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 44/296 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
           D+ VT G +Q +  +  ++  PG NVLL  P    Y G  Q           V      +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +P+        W+ + DA     +       + N  NP GN  T    +EI E+ARK   
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTF--GSIP-YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
           +++ D+ Y  L F  G +P +  M + G ++   +   I    +  G R G+L    P  
Sbjct: 226 LIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP-- 279
Query: 272 IFQKSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
                 +I+ +   + + +  P TF Q  I Q+L +  E+ F   +D + +      D +
Sbjct: 280 ------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAI 333
Query: 331 -----KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
                K +  ++  + P   M   +K     ++ IND  E   + A +  V++ PG
Sbjct: 334 LAAADKWLTGLAEWHVPAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 384

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/340 (20%), Positives = 130/340 (38%), Gaps = 29/340 (8%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y    G+P  R+ IA          L    V +T G      +  + L   G  V +  P
Sbjct: 64  YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAP 123
Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWE-VDLDAVEALADKNTAAMVIINPGNPCGNVFT 198
           G+P Y  I +   +        PE   + V  D     A  + A + + +P NP G    
Sbjct: 124 GYPSYRQILRALGLVPVDLPTAPENRLQPVPAD----FAGLDLAGLXVASPANPTGTXLD 179
Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258
           +     + E A+      ++DE+Y  + + +   T + L         + S SK +   G
Sbjct: 180 HAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE---CYVINSFSKYFSXTG 236
Query: 259 WRFGW-LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317
           WR GW +V  D   + ++  I  +   C    S +           L+          +D
Sbjct: 237 WRVGWXVVPEDQVRVVER--IAQNXFICAPHASQVAALAALDCDAELQAN--------LD 286
Query: 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIE-FALKLAKEESV 376
             + + ++  + + +         P+G+      ++     D+ DD   FA ++ ++  V
Sbjct: 287 VYKANRKLXLERLPKAGFTRI-APPDGAFYVYADVS-----DLTDDSRAFAAEILEKAGV 340
Query: 377 IVTPGIYVGLK---NWLRIAFCAEPSALKDGLGRMKAFCQ 413
            VTPG+    +     LR ++    + +++GL R++AF Q
Sbjct: 341 AVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFXQ 380

>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase From Clostridium Difficile 630 Crystallized With Magnesium Formate Length = 391

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/330 (18%), Positives = 139/330 (42%), Gaps = 27/330 (8%)
Query: 91  RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR 150
            +I ++L R   +K+ ++ +  + G   A+ ++++ L +    +++  P +  +  + + 
Sbjct: 74  ESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKN 133
Query: 151 KQVE--VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
              E  +     L   N+ +D + +E    K+    ++ NP NP G V+T   L+++ ++
Sbjct: 134 NNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDI 192
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRFGWLVT 266
             K  V +++DE++  +      + PM           IT  + +K + + G +  ++V 
Sbjct: 193 CLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVL 252
Query: 267 NDP------NGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLR 320
            D       +  F +  I     +C S+ +   ++  G          E +    ++ L 
Sbjct: 253 PDEKDYKLLDDAFTRIDI--KRNNCFSLVATEASYNNG----------ESWLESFLEYLE 300
Query: 321 ESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379
            + +     + E +P +    KPEG+ +  V  +   L D  +++E  L    + ++   
Sbjct: 301 SNIDFAIKYINENMPKLKV-RKPEGTYLLWVDFSALGLSD--EELESILVQKGKVALNQG 357
Query: 380 PGIYVGLKNWLRIAFCAEPSALKDGLGRMK 409
               +G   + RI      S L++ L R+K
Sbjct: 358 NSFGIGGSGYQRINLACPRSMLEEALIRIK 387

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           R+ +AD+      Y+L  +++  T G  + +E++  VL     N +   P +  Y   A 
Sbjct: 73  RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
            +  EVR   LL  ++ E DL+      D+ T  + I NP NP GN   Y  L +I    
Sbjct: 127 IEGAEVREIPLL--QDGEHDLEGXLNAIDEKTTIVWICNPNNPTGN---YIELADIQAFL 181
Query: 210 RKL--RVMVVADEVY 222
            ++   V+VV DE Y
Sbjct: 182 DRVPSDVLVVLDEAY 196

>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131) From Thermotoga Maritima Msb8 At 1.82 A Resolution Length = 425

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 14/193 (7%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYK-LSADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138
           Y+T  G P  ++ I   L R      L  D++  T+G +QA+++I  +     +  +L  
Sbjct: 81  YSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140
Query: 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE---ALADKNTAA------MVIINP 189
           P    Y G     +  + +F ++P  +   DL+ +E   +  DKN          V+ N 
Sbjct: 141 PA---YLGAINAFRQYLANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNF 197
Query: 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249
            NP G   +    + + E+A K  + +V D+ YG L +      P+   G    V+ L +
Sbjct: 198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNT 257
Query: 250 ISKRWLVPGWRFG 262
            SK  L PG R G
Sbjct: 258 FSK-VLAPGLRIG 269

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 84/235 (35%), Gaps = 22/235 (9%)
Query: 44  VVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLP 102
           V+ LG GD T   P   T              G ++ Y    G  P R AIA      L 
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVE---- 154
             +  DDV+V+ G K  +   L V+      + +  P +P Y      + Q  Q      
Sbjct: 116 -GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQ 173
Query: 155 ----VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
               + +    PE  +  DL  V       T  +   +P NP G   T   L ++ E A+
Sbjct: 174 KYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
           K   ++V D  Y        P +   + G+    +   S SK     G R GW V
Sbjct: 229 KNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTV 283

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 97  LSRDLPYKLSADDVYVTLG--CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE 154
           L++ +   L   D+ + LG    + +E+ +S+  +    +L+  P +  YE  A++  V 
Sbjct: 66  LNKSIENYLKLKDIGIVLGNGASEIIELSISLFEK----ILIIVPSYAEYEINAKKHGVS 121
Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           V  F  L E N  +D + + +  D +  +++I NP NP G +        + ++A + + 
Sbjct: 122 VV-FSYLDE-NMCIDYEDIISKID-DVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKK 178
Query: 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
            ++ DE +   T G    + +G   +   +  + +++K + +PG RFG+ +TN+
Sbjct: 179 TIIIDEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 108 DDVYVTLGCKQAVEVILSVLARPGAN-VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166
           + V V+ G  + +E+++     PG + +L   P +  Y   A+   VE R    L   NW
Sbjct: 76  EQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIGVECRTVPTLD--NW 133
Query: 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226
           ++DL  +    D     + + +P NP G +      + + E+ R  + +VVADE Y    
Sbjct: 134 QLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRG-KAIVVADEAY---- 187
Query: 227 FGSIPYTPM----GLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
              I + P     G       +  L ++SK + + G R G+ + N+
Sbjct: 188 ---IEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 108 DDVYVTLGCKQAVEVILSVLARPGAN-VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166
           + V V+ G  + +E+++     PG + +L   P +  Y   A+   VE R    L   NW
Sbjct: 76  EQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLD--NW 133
Query: 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226
           ++DL  +    D     + + +P NP G +      + + E+ R  + +VVADE Y    
Sbjct: 134 QLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRG-KAIVVADEAY---- 187
Query: 227 FGSIPYTPM----GLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
              I + P     G       +  L ++SK + + G R G+ + N+
Sbjct: 188 ---IEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230

>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex Length = 425

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 44/296 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
           D+ VT G +Q +  +  ++  PG NVLL  P    Y G  Q           V      +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +P+        W+ + DA     +       + N  NP GN  T    +EI E+ARK   
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
           +++ D+ Y  L F       +  M + G ++   +   I    +  G R G+L    P  
Sbjct: 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP-- 279
Query: 272 IFQKSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
                 +I+ +   + + +  P TF Q  I Q+L +  E+ F   +D + +      D +
Sbjct: 280 ------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAI 333
Query: 331 -----KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
                K +  ++  + P   M   +K     ++ IND  E   + A +  V++ PG
Sbjct: 334 LAAADKWLTGLAEWHVPAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 384

>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase Ii In Complex With Kynurenine Length = 425

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 44/296 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
           D+ VT G +Q +  +  ++  PG NVLL  P    Y G  Q           V      +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +P+        W+ + DA     +       + N  NP GN  T    +EI E+ARK   
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
           +++ D+ Y  L F       +  M + G ++   +   I    +  G R G+L    P  
Sbjct: 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP-- 279
Query: 272 IFQKSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
                 +I+ +   + + +  P TF Q  I Q+L +  E+ F   +D + +      D +
Sbjct: 280 ------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAI 333
Query: 331 -----KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
                K +  ++  + P   M   +K     ++ IND  E   + A +  V++ PG
Sbjct: 334 LAAADKWLTGLAEWHVPAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 384

>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 425

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 44/296 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
           D+ VT G +Q +  +  ++  PG NVLL  P    Y G  Q           V      +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +P+        W+ + DA     +       + N  NP GN  T    +EI E+ARK   
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
           +++ D+ Y  L F       +  M + G ++   +   I    +  G R G+L    P  
Sbjct: 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP-- 279
Query: 272 IFQKSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
                 +I+ +   + + +  P TF Q  I Q+L +  E+ F   +D + +      D +
Sbjct: 280 ------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAI 333
Query: 331 -----KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
                K +  ++  + P   M   +K     ++ IND  E   + A +  V++ PG
Sbjct: 334 LAAADKWLTGLAEWHVPAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 384

>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 44/296 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
           D+ VT G +Q +  +  ++  PG NVLL  P    Y G  Q           V      +
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 166
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +P+        W+ + DA     +       + N  NP GN  T    +EI E+ARK   
Sbjct: 167 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
           +++ D+ Y  L F       +  M + G ++   +   I    +  G R G+L    P  
Sbjct: 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI----ISSGLRIGFLTGPKP-- 279
Query: 272 IFQKSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
                 +I+ +   + + +  P TF Q  I Q+L +  E+ F   +D + +      D +
Sbjct: 280 ------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAI 333
Query: 331 -----KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
                K +  ++  + P   M   +K     ++ IND  E   + A +  V++ PG
Sbjct: 334 LAAADKWLTGLAEWHVPAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 384

>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 427

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 44/296 (14%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQ--------VEVRHFDL 160
           D+ VT G +Q +  +  ++  PG NVLL  P    Y G  Q           V      +
Sbjct: 112 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPA---YSGTLQSLHPLGCNIINVASDESGI 168
Query: 161 LPER------NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           +P+        W+ + DA     +       + N  NP GN  T    +EI E+ARK   
Sbjct: 169 VPDSLRDILSRWKPE-DAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 227
Query: 215 MVVADEVYGHLTFGSI---PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
           +++ D+ Y  L F       +  M + G ++   +   I    +  G R G+L    P  
Sbjct: 228 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP-- 281
Query: 272 IFQKSGIIDSIKDCLSIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330
                 +I+ +   + + +  P TF Q  I Q+L +  E+ F   +D + +      D +
Sbjct: 282 ------LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAI 335
Query: 331 -----KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381
                K +  ++  + P   M   +K     ++ IND  E   + A +  V++ PG
Sbjct: 336 LAAADKWLTGLAEWHVPAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPG 386

>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta (Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A Resolution Length = 417

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 139/340 (40%), Gaps = 45/340 (13%)
Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-----VLLP-RPGWPYY--EGIAQRKQ 152
           L + +   ++ +T G + A   + ++ A   A+     VL P  P +  Y   G+     
Sbjct: 92  LGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLF 151
Query: 153 VEVR-HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211
           V  R + +LLPE  ++  +D       + T  + +  P NP GNV T   L ++  +A +
Sbjct: 152 VSARPNIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGNVITDEELXKLDRLANQ 211
Query: 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVT 266
             + +V D  YG      +P+ P  +F    P     +I   S+SK  L PG R G ++ 
Sbjct: 212 HNIPLVIDNAYG------VPF-PGIIFSEARPLWNPNIILCXSLSKLGL-PGSRCGIIIA 263
Query: 267 NDP--NGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324
           ND     I   +GII                 +  + ++ E   + F+ + +   +++  
Sbjct: 264 NDKTITAIANXNGIISLAPGGXGPAXXCEXIKRNDLLRLSETVIKPFYYQRV---QQTIA 320
Query: 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL-LEDINDDIEFALKLAKEESVIVTPGIY 383
           I    + E  C+   +KPEG++        WL  +D+    E   +  K   V+  PG Y
Sbjct: 321 IIRRYLSEERCLI--HKPEGAIFL------WLWFKDLPITTELLYQRLKARGVLXVPGHY 372
Query: 384 V--GL-KNW------LRIAFCAEPSALKDGLGRMKAFCQR 414
              GL K W       R  +  EP  ++ G+  +    +R
Sbjct: 373 FFPGLDKPWPHTHQCXRXNYVPEPDKIEAGVKILAEEIER 412

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 84/235 (35%), Gaps = 22/235 (9%)
Query: 44  VVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLP 102
           V+ LG GD T   P   T              G ++ Y    G  P R AIA      L 
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVE---- 154
             +  DDV+V+ G K  +   L V+      + +  P +P Y      + Q  Q      
Sbjct: 116 -GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQ 173
Query: 155 ----VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
               + +    PE  +  DL  V       T  +   +P NP G   T   L ++ E A+
Sbjct: 174 KYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
           K   ++V D  Y        P +   + G+    +   S S+     G R GW V
Sbjct: 229 KNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTV 283

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 15/190 (7%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y  + G+P  R+ +++   R     + A +++++ G K  +  +LS    P   V +  P
Sbjct: 71  YGPDFGLPALRQKLSEDFYRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDP 126
Query: 140 GWPYYEGIAQRKQV-EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198
            +P Y  IA+     E+     L E  +  +        D +   + + +P NP G V  
Sbjct: 127 SYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE-----DTHIDILCLCSPNNPTGTVLN 181
Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---GSIVPVITLGSISKRWL 255
              L+ I   A +  ++++ D  Y   TF S P  P  +F    +    I + S SK   
Sbjct: 182 KDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPLG 239
Query: 256 VPGWRFGWLV 265
             G R GW V
Sbjct: 240 FAGIRLGWTV 249

>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase (Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15 A Resolution Length = 407

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP----- 162
           D + +T G + A+ + ++     G  V + +P +      A RK VE    + +P     
Sbjct: 103 DGLIITPGTQGALFLAVAATVARGDKVAIVQPDY-----FANRKLVEFFEGEXVPVQLDY 157
Query: 163 ----ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
               E    +DL  +E          +  NP NP G V++   + +IA +A +    V+A
Sbjct: 158 VSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIA 217
Query: 219 DEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRFG 262
           D++Y  L +    YT +    ++    V+T+   S    + G+R G
Sbjct: 218 DQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263

>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium Diphtheriae At 1.99 A Resolution Length = 377

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/335 (18%), Positives = 128/335 (38%), Gaps = 31/335 (9%)
Query: 91  RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR 150
           +A A++ +    Y+   + ++      + + + +       + V++P P +P +  +   
Sbjct: 65  QATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSA 124
Query: 151 KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
            Q E     +  +    ++L  VE        ++++ NP NP G VF    L E+ ++A 
Sbjct: 125 TQRE----GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXVFAPEWLNELCDLAH 180
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV-ITLGSISKRWLVPGWRFGWLVTNDP 269
           +    V+ DE++  L F        G+  +   V IT+ + S  W + G +   ++ ++P
Sbjct: 181 RYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWNIAGLKCAQIIFSNP 240
Query: 270 NGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329
           +       +   IKD  S    I         +   +   DF  + +  L+ + +     
Sbjct: 241 SDAEHWQQLSPVIKDGASTLGLIAA-------EAAYRYGTDFLNQEVAYLKNNHDFL--- 290
Query: 330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDI------EFALKLAKEESVIVTPGIY 383
           + EI     P +  G+ +T  +       D  D        EF ++ AK   V    G +
Sbjct: 291 LHEI-----PKRIPGAKITPXQATYLXWIDFRDTTIEGSPSEFFIEKAK---VAXNDGAW 342
Query: 384 VGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416
            G     + R+ F      L++ + R       HT
Sbjct: 343 FGEDGTGFCRLNFATSREVLEEAIDRXAKAVSHHT 377

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 83/235 (35%), Gaps = 22/235 (9%)
Query: 44  VVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLP 102
           V+ LG GD T   P   T              G ++ Y    G  P R AIA      L 
Sbjct: 58  VISLGIGDTTEPIPEVITSAMAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVE---- 154
             +  DDV+V+ G K  +   L V+      + +  P +P Y      + Q  Q      
Sbjct: 116 -GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQ 173
Query: 155 ----VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
               + +    PE  +  DL  V       T  +   +P NP G   T   L ++ E A+
Sbjct: 174 KYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
           K   ++V D  Y        P +   + G+    +   S S      G R GW V
Sbjct: 229 KNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTV 283

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 85/235 (36%), Gaps = 22/235 (9%)
Query: 44  VVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADYLSRDLP 102
           V+ LG GD T   P   T              G ++ Y    G  P R AIA      L 
Sbjct: 58  VISLGIGDTTEPIPEVITSAXAKKAHELSTIEG-YSGYGAEQGAKPLRAAIAKTFYGGL- 115
Query: 103 YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY------EGIAQRKQVEVR 156
             +  DDV+V+ G K  +   L V       + +  P +P Y       G   +   +V+
Sbjct: 116 -GIGDDDVFVSDGAKCDISR-LQVXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQ 173
Query: 157 HFDLL------PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210
            +  +      PE  +  DL  V       T  +   +P NP G   T   L ++ E A+
Sbjct: 174 KYGNIEYXRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEFAK 228
Query: 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
           K   ++V D  Y        P +   + G+        S SK     G R GW V
Sbjct: 229 KNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTV 283

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 122/335 (36%), Gaps = 25/335 (7%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPR 138
           Y    G    ++AI D+  R     L  +D V +  G K  +  + + +  PG  VLLP 
Sbjct: 81  YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPD 140
Query: 139 PGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195
           PG+  Y     +A  K V +     L   ++  D   V++     T  + +  P NP G+
Sbjct: 141 PGYTDYLAGVLLADGKPVPLN----LEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGS 196
Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255
             T     E     +     +V D  YG   F +   + +         I + S+SK + 
Sbjct: 197 TATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYN 256
Query: 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKL 315
             G+R G+ V N       K     +         D   +        LE+    F    
Sbjct: 257 XSGFRVGFAVGNKDXIQALKKYQTHTNAGXFGALQDAAIYALNHYDDFLEEQSNVF---- 312
Query: 316 IDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375
             T R+  E       ++P +      +G +   ++  P       D  +F   L +E+S
Sbjct: 313 -KTRRDRFEAXL-AKADLPFVHA----KGGIYVWLETPPGY-----DSEQFEQFLVQEKS 361
Query: 376 VIVTPGIYVGLKN--WLRIAFCAEPSALKDGLGRM 408
           ++V PG   G     ++RI+   +   L +   R+
Sbjct: 362 ILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRL 396

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           R  +A Y+++     ++ D+++   G  + ++ +L     PG   L  +P +  +  +A+
Sbjct: 72  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 131
Query: 150 RKQVEVRHFDLLPERNWEVDLD-AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
               E     +    ++ +D+D A+E +  K    + +  P NP G+V +   ++ I  +
Sbjct: 132 GTHTEF--IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 189
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
           A  +   V+ DE Y    F   P     L      ++   ++SK +   G R G+ V N
Sbjct: 190 APGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 243

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           R  +A Y+++     ++ D+++   G  + ++ +L     PG   L  +P +  +  +A+
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 150 RKQVEVRHFDLLPERNWEVDLD-AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
               E     +    ++ +D+D A+E +  K    + +  P NP G+V +   ++ I  +
Sbjct: 135 GTHTEF--IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
           A  +   V+ DE Y    F   P     L      ++   ++SK +   G R G+ V N
Sbjct: 193 APGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 246

>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase (Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50 A Resolution Length = 444

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 116/292 (39%), Gaps = 49/292 (16%)
Query: 18  KAAPAVTVKTSLASIIDSVN---KNDPRPVVPLGYGDPTAFPCFRTXXXXXXXXXXXXR- 73
           K     T  T ++ + D +    K+D +PV  LG G+P                      
Sbjct: 6   KFGQKFTQPTGISQLXDDLGDALKSD-QPVNXLGGGNPAKIDAVNELFLETYKALGNDND 64
Query: 74  SGKFNCYA----TNSGIPPARRAIAD----YLSRDLPYKLSADDVYVTLGCKQAVEVILS 125
           +GK N  A     N   P    A  D    + +R   + L+++++ +T G + A   + +
Sbjct: 65  TGKANSSAIISXANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFN 124
Query: 126 VLARPGAN--------------VLLPRPGWPYYEGIAQRKQVEVRHFD-LLPERN----- 165
           +      N              +LLP    P Y G +    VE +HF  +LP  +     
Sbjct: 125 LFGGAFVNEHSQDKESKSVDKSILLPLT--PEYIGYSDV-HVEGQHFAAVLPHIDEVTHD 181
Query: 166 -------WEVDLDAVE---ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215
                  + VD +A+E   AL +    A+    P NP GNV T      +AE+A++  + 
Sbjct: 182 GEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIP 241
Query: 216 VVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
           ++ D  YG   F +I Y+   L      ++   S+SK  L PG R G +V +
Sbjct: 242 LIIDNAYG-XPFPNIIYSDAHLNWDNNTILCF-SLSKIGL-PGXRTGIIVAD 290

>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant Staphylococcus Aureus Sar2028, An Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate Dependent Aminotransferase Length = 430

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 29/275 (10%)
Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDV---YVTLGCKQAVEVILSVLARPGANVLL 136
           YA   GI   R      + RD P +LS D++    VT      + ++  +       +LL
Sbjct: 84  YAPPQGIEELRDLWQQKMLRDNP-ELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILL 142
Query: 137 PRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALA--DKNTAAMVIINPGNPC 193
           P   W  Y+ +   R    ++ + +  +         VEAL   +K+   M++  P NP 
Sbjct: 143 PEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPT 202
Query: 194 GNVFTYHHLQEIAEMARKL-----RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV---- 244
           G   T+  +  I E  + L     +V+ V D+ Y  L +  + YT   LF ++  +    
Sbjct: 203 GYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV-YT-QSLFTALTNLHSNA 260
Query: 245 ---ITLGSISKRWLVPGWRFGWLV--TNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQG 298
              I L   +K +   G+R G++   T+D      K  +   +K  + S  S  P   Q 
Sbjct: 261 ILPIRLDGATKEFFAWGFRVGFMTFGTSDQT---TKEVLEAKVKGLIRSNISSGPLPTQS 317
Query: 299 AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333
           A+  +L+  K+  F K I+   ++ +  Y+  KE+
Sbjct: 318 AVKHVLKNNKQ--FDKEIEQNIQTLKERYEVTKEV 350

>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase (Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A Resolution Length = 367

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWE 167
           +V +  G  + +  +    ARPGA V  P PG+  Y   AQ   +E   F  +P R ++ 
Sbjct: 87  EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLE---FVGVPLRADFT 143
Query: 168 VDLDA-VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGH 224
           +D  A + A A+   A + +  P NP GN+F     + I   A+    R +VV DE Y  
Sbjct: 144 LDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQP 203
Query: 225 LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
               S   + +  FG++   +   ++SK  L  G R G+ V  DP  + Q
Sbjct: 204 FAQESW-XSRLTDFGNL---LVXRTVSKLGLA-GIRLGY-VAGDPQWLEQ 247

>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A Modulator In Mal Gene Expression Length = 390

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 92  AIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRK 151
           AIA + S      + +  V         V  ++   +  G  V++  P +  +    +  
Sbjct: 72  AIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGN 131
Query: 152 QVEVRHFDLLPERN-WEVDLDAVEA-LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
           Q  V    L  + + W  D+  +EA LA      M++ +P NP G V+T   L+ +A++ 
Sbjct: 132 QRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLC 191
Query: 210 RKLRVMVVADEVYGHLTFGSIPYTP 234
            +  V V++DE++  + +G  P+ P
Sbjct: 192 ERHGVRVISDEIHMDMVWGEQPHIP 216

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 12/196 (6%)
Query: 78  NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN--VL 135
           N Y  ++     R A   +  R    +L  +++  TLG ++ +    S +     N  + 
Sbjct: 53  NIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIA 112
Query: 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCG 194
            P P +  YEG A+  + +     L  E ++   L+  E         +VI+N P NP G
Sbjct: 113 YPNPFYQIYEGAAKFIKAKSLLXPLTKENDFTPSLNEKEL----QEVDLVILNSPNNPTG 168
Query: 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM---GLFG--SIVPVITLGS 249
              +   L    ++A K   +++ DE Y  +   + P + +    L G  +   V+ + S
Sbjct: 169 RTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVLVIHS 228
Query: 250 ISKRWLVPGWRFGWLV 265
           +SKR   PG R G++ 
Sbjct: 229 LSKRSSAPGLRSGFIA 244

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           R  +A Y+++     ++ D+++   G  + ++ +L     PG   L  +P +  +  +A+
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 150 RKQVEVRHFDLLPERNWEVDLD-AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
               E     +    ++ +D+D A+E +  K    + +  P NP G+V +   ++ I  +
Sbjct: 135 GTHTEF--IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
           A  +   V+ DE Y    F   P     L      ++   ++S  +   G R G+ V N
Sbjct: 193 APGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVAN 246

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198
           PG+  Y     +   E+R + L     W++    +EAL   +   + +  P NP G +  
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPE 164
Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258
              LQ IA+  + L + ++ DE +         + P         +  L S++K + +PG
Sbjct: 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPA--LKDNPHIWVLRSLTKFYAIPG 222
Query: 259 WRFGWLVTND 268
            R G+LV +D
Sbjct: 223 LRLGYLVNSD 232

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 20/204 (9%)
Query: 77  FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLL 136
           +  Y    G    R+AIA+   RDL  K  +++V+V+ G +  +   L +L      + +
Sbjct: 105 YRGYGLEQGNKTLRKAIAETFYRDLHVK--SNEVFVSDGAQSDISR-LQLLLGSNVTIAV 161
Query: 137 PRPGWPYYEG----IAQ--------RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184
             P +P Y      I Q        +K   V +    P  ++  DL    A+  + T  +
Sbjct: 162 QDPTFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDL----AMTPR-TDVI 216
Query: 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244
              +P NP G V +   L ++ + A+    +++ D  Y        P +   + G+    
Sbjct: 217 FFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVA 276
Query: 245 ITLGSISKRWLVPGWRFGWLVTND 268
           I + S SK     G R GW +  D
Sbjct: 277 IEVSSFSKFAGFTGVRLGWSIIPD 300

>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas Reinhardtii Length = 449

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 92/241 (38%), Gaps = 23/241 (9%)
Query: 38  KNDPRPVVPLGYGDPTA-FPCFRTXXXXXXXXXXXXRSGKFNCYATNSGIPPARRAIADY 96
           KN    ++ LG GD T   P +              R G ++ Y    G    R A+A  
Sbjct: 65  KNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREG-YSGYGAEQGQGALREAVAST 123
Query: 97  LSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEV 155
                    +AD+++++ G K  +  I  +  ++P   V +  P +P Y   +    +  
Sbjct: 124 FYGHA--GRAADEIFISDGSKCDIARIQMMFGSKP--TVAVQDPSYPVYVDTSVMMGMTG 179
Query: 156 RH----FDLL------PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
            H    FD +      P+ ++  DL        K T  +   +P NP G   T   L E+
Sbjct: 180 DHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTEL 234
Query: 206 AEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264
              ARK   ++V D  Y  +++    P T   + G+    I   S SK     G R GW 
Sbjct: 235 VNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWT 294
Query: 265 V 265
           V
Sbjct: 295 V 295

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	419
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	1e-166
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	1e-157
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	4e-69
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	6e-68
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	2e-61
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	1e-58
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	2e-55
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	9e-54
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	4e-53
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	1e-52
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	4e-52
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	5e-52
3ele_A	398	Amino transferase; RER070207001803, structural gen	4e-51
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	8e-51
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	1e-50
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	9e-50
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	1e-48
3nra_A	407	Aspartate aminotransferase; structural genomics, j	3e-48
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	1e-47
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	1e-47
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	8e-47
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	3e-46
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	1e-45
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	2e-45
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	3e-45
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	3e-45
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	6e-45
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	8e-44
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	1e-43
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	2e-43
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	1e-42
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	5e-41
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	3e-40
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	2e-39
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	3e-38
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	2e-37
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	3e-36
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	6e-36
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	5e-35
1vp4_A	425	Aminotransferase, putative; structural genomics, j	6e-35
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	1e-34
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	3e-34
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	3e-33
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	5e-32
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	8e-27
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	1e-26
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	1e-24
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	2e-24
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	7e-22
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	1e-21
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	2e-21
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	3e-21
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	3e-21
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	6e-21
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	6e-21
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	7e-21
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	1e-20
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	1e-18
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	9e-18
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	3e-16
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	4e-16
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	3e-15
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	5e-15
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	2e-13
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	2e-12
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	8e-11
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	9e-11
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	3e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	1e-05
3rq1_A	418	Aminotransferase class I and II; structural genomi	3e-05
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	7e-05
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	7e-05
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	5e-04
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	5e-04

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  473 bits (1219), Expect = e-166
 Identities = 135/380 (35%), Positives = 215/380 (56%), Gaps = 3/380 (0%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
            N  + ++ L  GDPT F    T  E   A+ DA+ SGK+N YA + G   +R  IA Y 
Sbjct: 50  PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYY 109

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
                  L A DV +T GC QA+++ L+VLA PG N+L+PRPG+  Y+ +A+   +EV+ 
Sbjct: 110 HCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKL 168

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
           ++LLPE++WE+DL  +E L D+ TA +++ NP NPCG+VF+  HLQ+I  +A +  V ++
Sbjct: 169 YNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPIL 228

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
           ADE+YG + F    Y P+    + VP+++ G ++KRWLVPGWR GW++ +D   IF    
Sbjct: 229 ADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNE- 287

Query: 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337
           I D +           T +QGA+  IL +T  +F+   +  L+ +A++CY  +  IP + 
Sbjct: 288 IRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR 347

Query: 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE 397
              +P G+M  MV +      +  +D+EF  +L  E+SV   P       N++R+     
Sbjct: 348 PV-RPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVP 406

Query: 398 PSALKDGLGRMKAFCQRHTK 417
              + +   R++ FC++H  
Sbjct: 407 EVMMLEACSRIQEFCEQHYH 426

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  448 bits (1156), Expect = e-157
 Identities = 111/390 (28%), Positives = 196/390 (50%), Gaps = 13/390 (3%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
              P+P++ L  GDPT      T+      + +A+ S + N Y    G P AR A+A + 
Sbjct: 29  SPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWW 88

Query: 98  SR------DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRK 151
                   +L   +  D+V +  G    + + ++ +   G   L+P+PG+P+YE + +  
Sbjct: 89  RNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAY 148

Query: 152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211
            + +  ++  PE +WE DLD +  L D  T  +++ NP NPCG+ F+  H+++I  +A +
Sbjct: 149 GIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEE 208

Query: 212 LRVMVVADEVYGHLTFG----SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
           LR+ + +DE+Y  + F     +  +T +  F + VP + LG  +K  +VPGWR GWL+  
Sbjct: 209 LRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYV 268

Query: 268 DPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICY 327
           DP+G       ++ +K    +     T +Q A+ + L  T ++   +++  + ESA   Y
Sbjct: 269 DPHGNGPS--FLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLY 326

Query: 328 DGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK 387
           + + E   ++    P G+M  M +++     DI  D+EF  KL +EE+V V PG      
Sbjct: 327 NHIGECIGLAPT-MPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAP 385

Query: 388 NWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
            + R+         ++ + R+KAFCQRH  
Sbjct: 386 GFTRLTTTRPVEVYREAVERIKAFCQRHAA 415

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  223 bits (570), Expect = 4e-69
 Identities = 100/383 (26%), Positives = 169/383 (44%), Gaps = 12/383 (3%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
           +     V+ L  GDP  F  F+     ++A   A++ G  N Y  + G+P  R+AI +  
Sbjct: 34  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVERE 91

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
            R     ++ DDV VT    +A+++I   L  PG  +L+P P +P Y G+ +    +   
Sbjct: 92  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 151

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
           +  + E +W+ D+D +       T A+ +INP NP G ++    L+EI  +A +  + V+
Sbjct: 152 YRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 211

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
           +DE+Y  +T+    +   G     VPVI +  +SK +   GWR G++   DP        
Sbjct: 212 SDEIYDLMTYEG-EHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLS--E 268

Query: 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337
           + ++I     I     T  Q A    L     D+  + +  L+E  +  Y  + EIP IS
Sbjct: 269 VREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGIS 327

Query: 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK--NWLRIAFC 395
              KP+G+     K+         +D EF L +     V+   G   G       R  F 
Sbjct: 328 TT-KPQGAFYIFPKIEV---GPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 383

Query: 396 AEPSALKDGLGRMKAFCQRHTKK 418
                L++ + R + F +   K+
Sbjct: 384 PPIEILEEAMDRFEKFMKERLKE 406

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  219 bits (560), Expect = 6e-68
 Identities = 79/380 (20%), Positives = 147/380 (38%), Gaps = 37/380 (9%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
           +  L   +      F  +    +     ++  K N Y    G P  +++++   +     
Sbjct: 29  ISSLTLEEL-----FALSGTNPEDFYKKLQGTKLN-YGWIEGSPAFKKSVSQLYTG---- 78

Query: 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163
            +  + +  T G   A  ++L  L  PG +V+   P +     I +    EV  + +  E
Sbjct: 79  -VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEE 137

Query: 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223
             W  DL+ +  L    T  + I N  NP G V    +L+E+ E+A ++   +++DEVY 
Sbjct: 138 NGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYR 197

Query: 224 HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK 283
             +   +P     ++      I + S+SK + +PG R GW+  N                
Sbjct: 198 SFSELDVPSII-EVYDK---GIAVNSLSKTYSLPGIRIGWVAANH-----------QVTD 242

Query: 284 DCLSI--YSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP 339
                  Y+ I    F        L    ++   +    L E+  I    ++E P +S  
Sbjct: 243 ILRDYRDYTMICAGVFDDLVAQLAL-AHYQEILERNRHILEENLAILDQWIEEEPLVSYI 301

Query: 340 NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPS 399
            +P     + VK+            +F L+L +E  V++ PG       ++R+ F  E  
Sbjct: 302 -RPAVVSTSFVKIAV-----DMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQE 355

Query: 400 ALKDGLGRMKAFCQRHTKKH 419
            L  GL ++  F +R  K++
Sbjct: 356 TLIKGLEKLSQFLRRFDKEN 375

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score =  205 bits (524), Expect = 2e-61
 Identities = 87/404 (21%), Positives = 163/404 (40%), Gaps = 46/404 (11%)

Query: 56  PCFRT-AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLS-RDLPYKLSADDVYVT 113
           P F   A +    I+ A        Y+ + G+   R  +A Y++ RD       D++Y+T
Sbjct: 100 PSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLT 159

Query: 114 LGCKQAVEVILSVLARPG----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVD 169
            G    +  IL +L   G      V++P P +P Y  +         ++ L  E  W ++
Sbjct: 160 TGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALN 219

Query: 170 LDAVEALADKNTA-----AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224
           ++ +     +         + IINPGNP G V +   ++++   A + ++ ++ADEVY  
Sbjct: 220 VNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD 279

Query: 225 LTFG---------SIPYTPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQ 274
             +           + Y     + S V + +  S SK ++   G+R G++   +      
Sbjct: 280 NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINL----- 334

Query: 275 KSGIIDSIKDCLSIYSDIPTFIQGAI------PQILEKTKEDF---FCKLIDTLRESAEI 325
              I   +   LS+    P   Q A+      P   E++ E F      ++  L + A++
Sbjct: 335 HPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKL 394

Query: 326 CYDGVKEIPCISCPNKPEGSMVTM--VKLNPWLLED-----INDDIEFALKLAKEESVIV 378
             D   ++P I C N  +G+M     + +    +E      +  D+ + +KL +E  + V
Sbjct: 395 TEDLFNQVPGIHC-NPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICV 453

Query: 379 TPGIYVGLKNW---LRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
            PG   G +      R+        LK  L ++K F     +K+
Sbjct: 454 VPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEKY 497

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score =  198 bits (505), Expect = 1e-58
 Identities = 74/405 (18%), Positives = 151/405 (37%), Gaps = 42/405 (10%)

Query: 51  DPTAFPCFRT-AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD 109
                  F   ++     I+  +       Y+ + GI   R AIA  ++    +  +ADD
Sbjct: 100 REEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADD 159

Query: 110 VYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168
           +++T G    V +++ +L R     +L+P P +P Y          +  + L     W +
Sbjct: 160 IFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGL 219

Query: 169 DLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222
           +   V+   +       N  A+V+INPGNP G V    +  +I +  +   ++++ADEVY
Sbjct: 220 ETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVY 279

Query: 223 GHLTFG------SIP--YTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIF 273
               +       S       +G     +P+++  S+SK +    G R G+          
Sbjct: 280 QENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGF---- 335

Query: 274 QKSGIIDSIKDCLSIYSDIPTFIQGAI------PQILEKTKEDF---FCKLIDTLRESAE 324
             + + + I    S+        Q         P+  +++   +      ++ +L   A+
Sbjct: 336 -SAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAK 394

Query: 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL-------LEDINDDIEFALKLAKEESVI 377
                  ++  I+C N+ EG+M    ++             +   D  +AL+L +   ++
Sbjct: 395 ALEHAFNKLEGITC-NEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIV 453

Query: 378 VTPGIYVGLKNW---LRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           V PG   G        R     +   +   + R   F +    ++
Sbjct: 454 VVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEY 498

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  187 bits (477), Expect = 2e-55
 Identities = 73/397 (18%), Positives = 145/397 (36%), Gaps = 60/397 (15%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
           R ++ +  G P           A +A+  ++ +     Y    G+P  R+ IA       
Sbjct: 31  RRIIHMEVGQPG----TGAPRGAVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWY 85

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161
              L    V +T G      +  + L   G  V +  PG+P Y  I +   +        
Sbjct: 86  GVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTA 145

Query: 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEV 221
           PE   +         A  + A +++ +P NP G +  +  +  + E A+      ++DE+
Sbjct: 146 PENRLQPV---PADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEI 202

Query: 222 YGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281
           Y  + + +   T + L         + S SK + + GWR GW+V  +          +  
Sbjct: 203 YHGIEYEAKAVTALELTDE---CYVINSFSKYFSMTGWRVGWMVVPED--------QVRV 251

Query: 282 IKDCLSIYSDI--PTFIQ-GAI-----PQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333
           + + ++    I  P   Q  A+        L+   + +        + + ++  + + + 
Sbjct: 252 V-ERIAQNMFICAPHASQVAALAALDCDAELQANLDVY--------KANRKLMLERLPKA 302

Query: 334 PCISCPNKPEG--------SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI--- 382
                   P+G        S +T             D   FA ++ ++  V VTPG+   
Sbjct: 303 GFTRIA-PPDGAFYVYADVSDLTD------------DSRAFAAEILEKAGVAVTPGLDFD 349

Query: 383 YVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
                  LR ++    + +++GL R++AF Q   + H
Sbjct: 350 PERGAGTLRFSYARATADIEEGLDRLEAFMQARGEGH 386

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  184 bits (468), Expect = 9e-54
 Identities = 74/413 (17%), Positives = 154/413 (37%), Gaps = 51/413 (12%)

Query: 39  NDPRPVVPLGYGDPTA---FPCFRTAVEAEDAIVDAVRSGKFN---CYATNSGIPPARRA 92
           ++   ++ +G  +            A   E A         F     +    G+P  ++A
Sbjct: 35  HNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKA 94

Query: 93  IADYLS--RDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-YYEGIAQ 149
           + D+++  R        + + +T G   A E  +  LA PG  VL+P P +P +   +  
Sbjct: 95  MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 154

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEA------LADKNTAAMVIINPGNPCGNVFTYHHLQ 203
           R  VE+          +++   A+E         +     +++ NP NP G   T + L 
Sbjct: 155 RTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 214

Query: 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-------------VITLGSI 250
            +        + +++DE+Y    F S  +  +     ++              V  + S+
Sbjct: 215 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISV---MEVLKDRNCDENSEVWQRVHVVYSL 271

Query: 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK-- 308
           SK   +PG+R G + +ND          + +    +S +  + +  Q  +  +L   K  
Sbjct: 272 SKDLGLPGFRVGAIYSNDDM--------VVAAATKMSSFGLVSSQTQHLLSAMLSDKKLT 323

Query: 309 EDFFCKLIDTLRESAEICYDGVKE--IPCISCPNKPEGSMVTMVKLNPWLLED-INDDIE 365
           +++  +    L++  +    G+++  I C+         +   V +   L  +    ++E
Sbjct: 324 KNYIAENHKRLKQRQKKLVSGLQKSGISCL----NGNAGLFCWVDMRHLLRSNTFEAEME 379

Query: 366 FALKLAKEESVIVTPGIYVGLK--NWLRIAFCAEP-SALKDGLGRMKAFCQRH 415
              K+  E  + ++PG         W R+ F   P   L   + R+KAF   +
Sbjct: 380 LWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 432

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  182 bits (463), Expect = 4e-53
 Identities = 71/405 (17%), Positives = 151/405 (37%), Gaps = 48/405 (11%)

Query: 44  VVPLGYGDPTA---FPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLS 98
           V+ +G  +                + +I             +    G+P  R+AIA ++ 
Sbjct: 38  VIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFME 97

Query: 99  R--DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-YYEGIAQRKQVEV 155
           +      +   + V +  G   A E I+  LA PG   L+P P +P +   +  R  V++
Sbjct: 98  KTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQL 157

Query: 156 RHFDLLPERNWEVDLDAVEA------LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
                    N+++   AV+        ++     +++ NP NP G       L+ +    
Sbjct: 158 IPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFT 217

Query: 210 RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----------VITLGSISKRWLVPG 258
            +  + +V DE+Y    F +  +        I+            V  + S+SK   +PG
Sbjct: 218 NQHNIHLVCDEIYAATVFDTPQFVS---IAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG 274

Query: 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLI 316
           +R G + + + +       +++  +  +S +  + T  Q  +  +L   K  ++F  +  
Sbjct: 275 FRVGIIYSFNDD-------VVNCARK-MSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESA 326

Query: 317 DTLRESAEICYDGVKE--IPCISCPNKPEGSMVTMVKLNPWLLED-INDDIEFALKLAKE 373
             L +  +   +G++   I C+    K    +   + L P L E   + ++     +  +
Sbjct: 327 MRLGKRHKHFTNGLEVVGIKCL----KNNAGLFCWMDLRPLLRESTFDSEMSLWRVIIND 382

Query: 374 ESVIVTPGIYVGLK--NWLRIAFCA-EPSALKDGLGRMKAFCQRH 415
             + V+PG     +   W R+ F   +   +   L R++ F    
Sbjct: 383 VKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  180 bits (459), Expect = 1e-52
 Identities = 85/394 (21%), Positives = 153/394 (38%), Gaps = 40/394 (10%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
           K     +  L  G P      +T     + I +     +   Y+ ++GI   R A A Y 
Sbjct: 39  KKRGVRIHHLNIGQPD----LKTPEVFFERIYENKP--EVVYYSHSAGIWELREAFASYY 92

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
            R     +  ++V VT G  +A+    +V+A PG  +L+  P +  Y   A+   V++  
Sbjct: 93  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIP 152

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
                E  + +    +E+  ++ T  +V+ NP NP G V+    ++ + E+A +  + ++
Sbjct: 153 VTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLI 211

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275
            DEVY  + F     + +    SI    V+ + S+SK++   G R G L+T +       
Sbjct: 212 VDEVYSEIVFRGEFASAL----SIESDKVVVIDSVSKKFSACGARVGCLITRNEE----- 262

Query: 276 SGIIDSIKDCLSIYSDIPTFIQ-GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334
             +I             P   Q G++  +     + FF  + +T RE  E     ++E  
Sbjct: 263 --LISHAMKLAQGRLAPPLLEQIGSVGLL--NLDDSFFDFVRETYRERVETVLKKLEEHG 318

Query: 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE-----ESVIVTPGIYVGL--- 386
                 KP G+     +L       + D  EFA  +  +     E+ +V P     L   
Sbjct: 319 LKRFT-KPSGAFYITAELP------VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPG 371

Query: 387 --KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
             K  +RIA   E   L   +  +    +     
Sbjct: 372 LGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCSS 405

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  179 bits (456), Expect = 4e-52
 Identities = 65/406 (16%), Positives = 117/406 (28%), Gaps = 46/406 (11%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
                +  G P   P  +  +E E   +  +R G  + Y    G+P  ++  + +    +
Sbjct: 44  TKFCRMEMGVPG-LPAPQIGIETE---IQKLREGVASIYPNLDGLPELKQEASRFAKLFV 99

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLAR----PGANVLLPRPGWPYYEGIAQRKQVEVRH 157
              + A     T+G  Q   V   V  R         L   PG+   +   +    +   
Sbjct: 100 NIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFES 159

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
           FDL   R  ++       L      +++  NP NP     T   L+ I E+A K  V+V+
Sbjct: 160 FDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVI 219

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVP-------VITLGSISKRWLVPGWRFGWLVTNDP- 269
            D  Y  + F    Y+  G               I   S SK +   G R G L+ +   
Sbjct: 220 EDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKL 278

Query: 270 -----NGIFQKSGIIDSIKDCLSIY-----SDIPTFIQGAIPQILEKTKEDFFC--KLID 317
                  + +  G +   +   S       S      Q  +  +L+   +  +     + 
Sbjct: 279 YEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVI 338

Query: 318 TLRESAEICYDGVKE-----IPCISCPNKPEGS--MVTMVKLNPWLLEDINDDIEFALKL 370
                A I      +     +       +P       T+            D  +   K 
Sbjct: 339 EYGRKARIMKKMFLDNGFNIVYDKDGN-EPLADGFYFTVGYKG-------MDSSKLIEKF 390

Query: 371 AKEESVIVTPGIYVGLK--NWLRIAFCAEPSALKDGLGRMKAFCQR 414
            +     +T       +             S   D   R++     
Sbjct: 391 VRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  179 bits (456), Expect = 5e-52
 Identities = 89/422 (21%), Positives = 151/422 (35%), Gaps = 51/422 (12%)

Query: 24  TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN 83
           ++    A+   + +KN  R ++ LG G    F  +     A      A+     N Y+  
Sbjct: 39  SLTNEAAAKAANNSKNQGRELINLGQG----FFSYSPPQFAIKEAQKALDIPMVNQYSPT 94

Query: 84  SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY 143
            G P    ++    S     +L A++V VT G  + +   L  L   G  V++  P +  
Sbjct: 95  RGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQ 154

Query: 144 YEGIAQR---KQVEVR-------HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193
           Y    +    K V V                 W +D +  E      T A++I  P NP 
Sbjct: 155 YIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPI 214

Query: 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLG 248
           G VFT   L  +  +  K  V++++DEVY HL F         L     P      +T+G
Sbjct: 215 GKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLS----PEIGQLTLTVG 270

Query: 249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKT 307
           S  K +   GWR GW+++ +         ++       + I    P+ +Q A    +   
Sbjct: 271 SAGKSFAATGWRIGWVLSLNAE-------LLSYAAKAHTRICFASPSPLQEACANSINDA 323

Query: 308 KED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS----------MVTMVKLNPWL 356
            +  +F K+        +I      E+        PEG+           +      P  
Sbjct: 324 LKIGYFEKMRQEYINKFKIFTSIFDELGL--PYTAPEGTYFVLVDFSKVKIPEDYPYPEE 381

Query: 357 LEDINDDIEFALKLAKEESVIVTPGI-------YVGLKNWLRIAFCAEPSALKDGLGRMK 409
           + +   D   +  L  E  V+  P             +N LR A C + + L++ + R+K
Sbjct: 382 ILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLK 441

Query: 410 AF 411
             
Sbjct: 442 LL 443

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  175 bits (447), Expect = 4e-51
 Identities = 81/394 (20%), Positives = 168/394 (42%), Gaps = 52/394 (13%)

Query: 44  VVPLGYGDPTAFP---CFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100
           V     G+P+  P           ++ + D       + Y +  G    R AIA++L+  
Sbjct: 37  VYDFSIGNPS-IPAPQIVNDT--IKELVTDYDSVA-LHGYTSAQGDVETRAAIAEFLNNT 92

Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-VLLPRPGWPYYEGI---AQRKQVEVR 156
                +AD++Y+T+G   ++ +    L     +  +   P +P Y+     A  + VEV 
Sbjct: 93  HGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVP 152

Query: 157 HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK----- 211
                   ++++D DA+E   + +T  ++I +P NP G V++   +++++++  K     
Sbjct: 153 ----ADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEI 208

Query: 212 -LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLV 265
              + ++ADE Y  + +        G+    V       +   S SK   +PG R G+++
Sbjct: 209 GRPIFIIADEPYREIVYD-------GIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVL 261

Query: 266 TNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESA 323
              P+ ++ K+ +  ++         +  P+  Q  I +    T +      I+  +E+ 
Sbjct: 262 V--PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATGD------INAYKENR 313

Query: 324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY 383
           ++ Y+G+  I    C  KP+G+    VK         +D   F  + AKEE V++     
Sbjct: 314 DLLYEGLTRIG-YHCF-KPDGAFYMFVKAL------EDDSNAFC-EKAKEEDVLIVAADG 364

Query: 384 VGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
            G   W+RI++C +   +K  +   +   +++ K
Sbjct: 365 FGCPGWVRISYCVDREMIKHSMPAFEKIYKKYNK 398

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  175 bits (446), Expect = 8e-51
 Identities = 99/413 (23%), Positives = 155/413 (37%), Gaps = 59/413 (14%)

Query: 27  TSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           ++LA+ I +VN         LG G    FP      +   A  DA+  G  N Y    G 
Sbjct: 19  SALATRIGAVN---------LGQG----FPDEDGPPKMLQAAQDAIAGG-VNQYPPGPGS 64

Query: 87  PPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
            P RRAIA    R        + +V VT+G  +A+   +  L  PG+ VLL  P +  Y 
Sbjct: 65  APLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYS 124

Query: 146 GIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204
            +            L+P+ R + +D DA+       T A++I +P NP G V +   L  
Sbjct: 125 PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAA 184

Query: 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGW 259
           IAE+A    ++V+ DEVY HL F    + P+  F           IT+ S +K +   GW
Sbjct: 185 IAEIAVAANLVVITDEVYEHLVFDHARHLPLAGF----DGMAERTITISSAAKMFNCTGW 240

Query: 260 RFGWLVTNDPNGIFQKSGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317
           + GW              +I  ++       Y       Q A+   L+  ++ +   L +
Sbjct: 241 KIGWACGPAE--------LIAGVRAAKQYLSYV-GGAPFQPAVALALDT-EDAWVAALRN 290

Query: 318 TLRESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375
           +LR   +    G+ EI            G+        P      +D  EF   L ++  
Sbjct: 291 SLRARRDRLAAGLTEIGFAVH----DSYGTYFLCADPRPL---GYDDSTEFCAALPEKVG 343

Query: 376 VIVTPG-------------IYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
           V   P                    + +R  FC     L + + R+    +R 
Sbjct: 344 VAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERP 396

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  175 bits (446), Expect = 1e-50
 Identities = 73/415 (17%), Positives = 150/415 (36%), Gaps = 44/415 (10%)

Query: 31  SIIDSVNKNDPRP-VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87
            +++ +N     P  + LG G                 D +     +     Y    G  
Sbjct: 19  RLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKT 78

Query: 88  PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN---VLLPRPGWPYY 144
               A+A  L   L + +   ++ +T G + A   + ++ A   A+     +  P  P Y
Sbjct: 79  ALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEY 138

Query: 145 EGIAQRKQVEVR------HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198
            G A     +        + +LLPE  ++  +D       + T  + +  P NP GNV T
Sbjct: 139 IGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVIT 198

Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258
              L ++  +A +  + +V D  YG    G I ++      +   +I   S+SK   +PG
Sbjct: 199 DEELMKLDRLANQHNIPLVIDNAYGVPFPG-IIFSEARPLWN-PNIILCMSLSK-LGLPG 255

Query: 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILEKTKEDFFC-KL 315
            R G ++ ND          I ++         +         + +++++         +
Sbjct: 256 SRCGIIIANDK--TITA---IANMNG----IISLAPGGMGPAMMCEMIKRNDLLRLSETV 306

Query: 316 IDTL-RESAEICYDGVKE-IPCISCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAK 372
           I     +  +     ++  +    C  +KPEG++   +       +D+    E   +  K
Sbjct: 307 IKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLW-----FKDLPITTELLYQRLK 361

Query: 373 EESVIVTPGI--YVGL-------KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
              V++ PG   + GL          +R+ +  EP  ++ G+  +    +R  ++
Sbjct: 362 ARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERAWRE 416

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  171 bits (437), Expect = 9e-50
 Identities = 88/399 (22%), Positives = 150/399 (37%), Gaps = 50/399 (12%)

Query: 27  TSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           ++LA    ++N         L  G    FP F      ++ +   V  G  N YA  +G+
Sbjct: 24  SALAQQHQAIN---------LSQG----FPDFDGPRYLQERLAHHVAQG-ANQYAPMTGV 69

Query: 87  PPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
              R AIA    R   Y+  AD D+ VT G  +A+   ++ L R G  V+   P +  Y 
Sbjct: 70  QALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYA 129

Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
                    V+   L P  ++ VD     AL  + T  +++  P NP   V+       +
Sbjct: 130 PAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAAL 188

Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWR 260
            +      + V++DEVY H+ F    +  +       P      + + S  K + + GW+
Sbjct: 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAH----PQLRERAVAVSSFGKTYHMTGWK 244

Query: 261 FGWLVTNDPNGIFQKSGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT 318
            G+ V   P        I   I+       +S + T  Q A+  +L   + + +  L D 
Sbjct: 245 VGYCVAPAP--------ISAEIRKVHQYLTFS-VNTPAQLALADMLRA-EPEHYLALPDF 294

Query: 319 LRESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV 376
            R+  +I  + + E     +      EG+   +V  +        DD+EF   L +E  V
Sbjct: 295 YRQKRDILVNALNESRLEIL----PCEGTYFLLVDYSAVSTL---DDVEFCQWLTQEHGV 347

Query: 377 IVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKAF 411
              P             +R+ F  + S L     R++  
Sbjct: 348 AAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL 386

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  168 bits (429), Expect = 1e-48
 Identities = 92/383 (24%), Positives = 160/383 (41%), Gaps = 43/383 (11%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
           +++ + V+ L  G+P     F T     D  + +++ G    Y  + GI   R  I++  
Sbjct: 25  ESEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELY 79

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVE 154
                  +  D++ +T G    +   LS +   G  VL+  P +P Y+        K V 
Sbjct: 80  KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVF 139

Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
                       +  ++++E      T A++I +P NP G V      +EI E A +   
Sbjct: 140 C-----------DFTVESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIP 184

Query: 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
            +++DE+Y  L +    Y+ +    ++   I +   SK + + GWR G++++ND      
Sbjct: 185 YIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDE----- 239

Query: 275 KSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333
              II++I      ++   PT  Q A  +  EK  E     +I        +    VK+ 
Sbjct: 240 ---IIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296

Query: 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLR 391
                   P G+      +         D  EFA KL KE+ V +TPGI  G   KN++R
Sbjct: 297 G-WEVN-NPIGAYYVFPNIG-------EDGREFAYKLLKEKFVALTPGIGFGSKGKNYIR 347

Query: 392 IAFCAEPSALKDGLGRMKAFCQR 414
           I++      +K+GL R+K F  +
Sbjct: 348 ISYANSYENIKEGLERIKEFLNK 370

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  168 bits (428), Expect = 3e-48
 Identities = 66/390 (16%), Positives = 130/390 (33%), Gaps = 43/390 (11%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD--L 101
            V   +GD        T    +         G    Y    G    R  +A  L+     
Sbjct: 41  PVDFSHGDVD-AHE-PTPGAFDLFSAGVQSGG-VQAYTEYRGDLGIRDLLAPRLAAFTGA 97

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVR-H 157
           P   + D + +T G + A+ + ++     G  V + +P +     +    + + V V+  
Sbjct: 98  PVD-ARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLD 156

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
           +    E    +DL  +E          +  NP NP G V++   + +IA +A +    V+
Sbjct: 157 YVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVI 216

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPNGI 272
           AD++Y  L +    YT      +        V+T+   SK   + G+R G    +     
Sbjct: 217 ADQLYSRLRYAGASYTH---LRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRA--- 270

Query: 273 FQKSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE----ICY 327
                II  ++   +I       + Q  +    ++         ++      +       
Sbjct: 271 -----IIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGW-----MEDRIARHQAIRDELL 320

Query: 328 DGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL- 386
             ++    +     P+       +L     +      EF   L  +  V+VTPG      
Sbjct: 321 HVLRGCEGVFAR-TPQAGSYLFPRLP----KLAVAPAEFVKILRLQAGVVVTPGTEFSPH 375

Query: 387 -KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
             + +R+ F  +  A      R+    +R+
Sbjct: 376 TADSVRLNFSQDHEAAVAAARRIVTLVERY 405

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  166 bits (424), Expect = 1e-47
 Identities = 81/390 (20%), Positives = 153/390 (39%), Gaps = 44/390 (11%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
             ++ L  G+P       T     + +    +    + Y+T+ GIP  RRAI+ +     
Sbjct: 37  EDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDR- 91

Query: 102 PYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHF 158
            Y +  D   +  VT+G K+ +  ++      G  +L+P P +P +   A     +VR  
Sbjct: 92  -YDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSV 150

Query: 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
            L+P  ++  +L+     +      M++  P NP          + +  +A++  VMVV 
Sbjct: 151 PLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVH 210

Query: 219 DEVYGHLTFGSIPYTPMGLFGSI--VP-----VITLGSISKRWLVPGWRFGWLVTNDPNG 271
           D  Y  + +    +       SI  VP      +   ++SK + + GWR G++V N    
Sbjct: 211 DLAYADIVYDG--WKAP----SIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN---- 260

Query: 272 IFQKSGIIDS---IKDCLSIYSDIPTFIQ-GAIPQILEKTKEDFFCKLIDTLRESAEICY 327
                 ++ +   IK          T +Q  AI  +  +  +     +    ++  ++  
Sbjct: 261 ----PELVSALARIKS--YHDYGTFTPLQVAAIAAL--EGDQQCVRDIARQYQQRRDVLV 312

Query: 328 DGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL- 386
            G++E         P+ SM    K+           +EFA KL ++  V V+PGI  G  
Sbjct: 313 KGLREAGW-MVE-NPKASMYVWAKIPEPYAHL--GSLEFAKKLLQDAKVSVSPGIGFGDY 368

Query: 387 -KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
             + +R A       L+  +  +KA  +  
Sbjct: 369 GDDHVRFALIENRDRLRQAVRGIKAMFRAD 398

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  166 bits (422), Expect = 1e-47
 Identities = 99/404 (24%), Positives = 162/404 (40%), Gaps = 60/404 (14%)

Query: 27  TSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           + LA  + +VN         LG G    FP         +A+  A+     + YA  +G+
Sbjct: 19  SGLAQRLGAVN---------LGQG----FPSNPPPPFLLEAVRRALGRQ--DQYAPPAGL 63

Query: 87  PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG 146
           P  R A+A+  + +       + V VT G  +A+ V+L  L  PG  V++  P +  Y  
Sbjct: 64  PALREALAEEFAVE------PESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP 117

Query: 147 IAQRKQVEVRHFDL-LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
            A     + R   L L    + +DL A+E      T A+++  P NP G VF    L+ I
Sbjct: 118 DAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAI 177

Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRFGW 263
           A +AR   + +++DEVY  L +G  P           P    T+GS  KR    G+R GW
Sbjct: 178 ARLARAHDLFLISDEVYDELYYGERPRRLR----EFAPERTFTVGSAGKRLEATGYRVGW 233

Query: 264 LVTNDPNGIFQKSGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLR 320
           +V             +  +      + +S  PT +Q  + + L+  + + F+  L +  R
Sbjct: 234 IVGPKE--------FMPRLAGMRQWTSFS-APTPLQAGVAEALKLARREGFYEALREGYR 284

Query: 321 ESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIV 378
              ++   G++ +          PEG+   M +L  W           A +L +E  V +
Sbjct: 285 RRRDLLAGGLRAMGLRVY----VPEGTYFLMAELPGW----------DAFRLVEEARVAL 330

Query: 379 TPG--IYVG--LKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418
            P    Y+    K+  R AFC     L   L R+        + 
Sbjct: 331 IPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVVNSPREA 374

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  164 bits (418), Expect = 8e-47
 Identities = 82/422 (19%), Positives = 150/422 (35%), Gaps = 66/422 (15%)

Query: 27  TSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           T LA+    VN         LG G    FP        ++ +  A      N Y    G 
Sbjct: 17  TKLAADPSVVN---------LGQG----FPDISPPSYVKEELSKAAFIDNMNQYTRGFGH 63

Query: 87  PPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
           P   +A++    +    ++  + ++ V +G   ++   +  L  PG  V++  P +  YE
Sbjct: 64  PALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYE 123

Query: 146 GIAQRKQVEVRHFDLLPER---------NWEVDLDAVEALADKNTAAMVIINPGNPCGNV 196
            + +          L  +          +W  D   +E+     T A+++  P NP G V
Sbjct: 124 PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKV 183

Query: 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM----GLFGSIVPVITLGSISK 252
           +T   LQ IA++  K   + ++DEVY  L +    +  +    G++      IT+GS  K
Sbjct: 184 YTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER---TITIGSAGK 240

Query: 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKTK-- 308
            + V GW+ GW +            +I  ++     S Y+   T +Q A+ +        
Sbjct: 241 TFSVTGWKLGWSIGPAH--------LIKHLQTVQQNSFYT-CATPLQAALAEAFWIDIKR 291

Query: 309 ----EDFFCKLIDTLRESAEICYDGVKEI--PCISCPNKPEGS---MVTMVKLN---PWL 356
               E +F  L   L    +     +  +    I     P+G    +  +  L      +
Sbjct: 292 MDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPI----VPDGGYFIIADVSSLGADLSDM 347

Query: 357 LEDINDDIEFALKLAKEESVIVTPG-------IYVGLKNWLRIAFCAEPSALKDGLGRMK 409
             D   D +F   + K + +   P             +  +R  F  + S L       +
Sbjct: 348 NSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFR 407

Query: 410 AF 411
           A+
Sbjct: 408 AW 409

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  163 bits (415), Expect = 3e-46
 Identities = 85/424 (20%), Positives = 160/424 (37%), Gaps = 68/424 (16%)

Query: 27  TSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNS 84
             LA+    +N         LG G    FP +     A +A+  A  S     N Y    
Sbjct: 31  IQLAAQYKPLN---------LGQG----FPDYHAPKYALNALAAAANSPDPLANQYTRGF 77

Query: 85  GIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY 143
           G P   +A++   S+ +   ++   +V VT+G  +A+   +      G  V++  P +  
Sbjct: 78  GHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDC 137

Query: 144 YEGIAQRKQVEVRHFDLLPER--------NWEVDLDAVEALADKNTAAMVIINPGNPCGN 195
           YE + +      R   L P +        +W +D + +EAL ++ T  ++I  P NP G 
Sbjct: 138 YEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGK 197

Query: 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM----GLFGSIVPVITLGSIS 251
           V     L+ +A + +K  V+ V+DEVY H+ F    +  +    G++      IT+GS  
Sbjct: 198 VMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWER---TITIGSAG 254

Query: 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKTKE 309
           K + + GW+ GW    +         ++ +++      +Y+   T IQ AI    E   +
Sbjct: 255 KTFSLTGWKIGWAYGPEA--------LLKNLQMVHQNCVYT-CATPIQEAIAVGFETELK 305

Query: 310 ------DFFCKLIDTLRESAEICYDGVKEI--PCISCPNKPEGSMVTMV-------KLNP 354
                  +F  +   L    +     + E+          P+G    +        K++ 
Sbjct: 306 RLKSPECYFNSISGELMAKRDYMASFLAEVGMNPT----VPQGGYFMVADWSSLDSKVDL 361

Query: 355 WLLEDINDDIEFALKLAKEESVIVTPG-------IYVGLKNWLRIAFCAEPSALKDGLGR 407
               D   D  F   + K   +   P             ++++R  F  +   L+     
Sbjct: 362 TQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEI 421

Query: 408 MKAF 411
           ++ +
Sbjct: 422 LRKW 425

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score =  160 bits (408), Expect = 1e-45
 Identities = 88/388 (22%), Positives = 158/388 (40%), Gaps = 46/388 (11%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
             V     G+P     F T     +A   A+  G    Y   +G P  R AIA  L RD 
Sbjct: 30  IDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDN 84

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHF 158
                AD++ VT G KQ++  ++  +  PG  V++P P W  Y  +   A+   V +   
Sbjct: 85  GLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVIL--- 141

Query: 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
               E  ++V  + +       T  +V   P NP G V+T   ++ IA++A +  + V++
Sbjct: 142 PTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLS 201

Query: 219 DEVYGHLTFGSIPYTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPNGIF 273
           DE+Y  + +    +  +   G+  P      +     +K + + GWR G+L    P    
Sbjct: 202 DEIYEKILYDDAQHLSI---GAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP---- 254

Query: 274 QKSGIIDSIKDCLS-IYSDIPTFIQ-GAI-----PQILEKTKEDFFCKLIDTLRESAEIC 326
               ++ +         S++ TF Q GAI      Q       D   +++    E     
Sbjct: 255 ----LVKAATKIQGHSTSNVCTFAQYGAIAAYENSQ-------DCVQEMLAAFAERRRYM 303

Query: 327 YDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL 386
            D +  +P + CP KP+G+      +     +     ++F  +L  +  V   PG   G 
Sbjct: 304 LDALNAMPGLECP-KPDGAFYMFPSIA----KTGRSSLDFCSELLDQHQVATVPGAAFGA 358

Query: 387 KNWLRIAFCAEPSALKDGLGRMKAFCQR 414
            + +R+++  +   +K G+ R++ F   
Sbjct: 359 DDCIRLSYATDLDTIKRGMERLEKFLHG 386

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  161 bits (409), Expect = 2e-45
 Identities = 85/426 (19%), Positives = 155/426 (36%), Gaps = 70/426 (16%)

Query: 27  TSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-KFNCYATNSG 85
             LAS  D VN         LG G    FP F     A +A   AV      N Y    G
Sbjct: 22  VKLASEHDVVN---------LGQG----FPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFG 68

Query: 86  IPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY 144
            PP  + +A +    L  ++    +V VT+G   A+      L   G  V++  P +  Y
Sbjct: 69  YPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCY 128

Query: 145 EGIAQRKQVEVRHFDLLP----------ERNWEVDLDAVEALADKNTAAMVIINPGNPCG 194
           E +            L P            NW++D   +       T A+V+  P NP G
Sbjct: 129 EPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLG 188

Query: 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM----GLFGSIVPVITLGSI 250
            VF+   L+ +A + ++  V+ + DEVY  + +    +  +    G++      +T+GS 
Sbjct: 189 KVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWER---TLTIGSA 245

Query: 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--LSIYSDIPTFIQGAIPQILEK-- 306
            K +   GW+ GW++  D         I+  ++     S++   PT  Q A+ +  E+  
Sbjct: 246 GKTFSATGWKVGWVLGPDH--------IMKHLRTVHQNSVFH-CPTQSQAAVAESFEREQ 296

Query: 307 ----TKEDFFCKLIDTLRESAEICYDGVKEI--PCISCPNKPEG--------SMVTMVKL 352
                   +F +    ++   +     ++ +    I     P+G        S       
Sbjct: 297 LLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPI----IPQGSYFLITDISDFKRKMP 352

Query: 353 NPWLLEDINDDIEFALKLAKEESVIVTPG-------IYVGLKNWLRIAFCAEPSALKDGL 405
           +     D   D  F   + K + ++  P              +++R  F  + + L+   
Sbjct: 353 DLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMD 412

Query: 406 GRMKAF 411
            +++ +
Sbjct: 413 EKLRKW 418

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  161 bits (410), Expect = 3e-45
 Identities = 74/420 (17%), Positives = 149/420 (35%), Gaps = 69/420 (16%)

Query: 44  VVPLGYGDPTAFPCFRTAV-EAEDAIVDAVRSGKFNC--------YATNSGIPPARRAIA 94
           V  LG G+P           E   A+ +   +GK N         Y+   G      A+ 
Sbjct: 34  VNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALV 93

Query: 95  DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN---------------VLLPRP 139
            + +R   + L+++++ +T G + A   + ++      N               +L   P
Sbjct: 94  GFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTP 153

Query: 140 GWPYYEGIAQRKQ---------VEVRHFDLLPERNWEVDLDAVEALA---DKNTAAMVII 187
            +  Y  +    Q          EV H        + VD +A+E L    +    A+   
Sbjct: 154 EYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCS 213

Query: 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247
            P NP GNV T   +  +AE+A++  + ++ D  YG      I Y+   L       I  
Sbjct: 214 RPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPN-IIYSDAHLNWD-NNTILC 271

Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILE 305
            S+SK   +PG R G +V +          +I+++    +   ++    F       ++ 
Sbjct: 272 FSLSK-IGLPGMRTGIIVADAK--------VIEAVSAMNA-VVNLAPTRFGAAIATPLVA 321

Query: 306 KTKEDFFC--KLIDTLRESAEICYDGVKEI-PCISCP-NKPEGSMVTMVKLNPWLLEDIN 361
             +       ++    ++ A +    +K+         +KPEG++        W  +   
Sbjct: 322 NDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLW----LWFKDLPI 377

Query: 362 DDIEFALKLAKEESVIVTPGI--YVGL--------KNWLRIAFCAEPSALKDGLGRMKAF 411
             ++   +  K +  ++ P    + G+           +R++  A+   L DG+  +   
Sbjct: 378 STLDLY-ERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEV 436

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  159 bits (406), Expect = 3e-45
 Identities = 87/385 (22%), Positives = 160/385 (41%), Gaps = 39/385 (10%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD--L 101
           V+ LG G+P     F T    ++   +A+  G    Y  N G+   R AIA+ L +   +
Sbjct: 28  VISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNGI 82

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHF 158
                  ++ V LG  QA  + LS   + G  VL+P P +  Y      A  K VEV   
Sbjct: 83  EAD-PKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV--- 138

Query: 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
               E  + +++D ++      T A++I +P NP G V T   L+EIA+   +  ++V++
Sbjct: 139 PTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVIS 198

Query: 219 DEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
           DEVY H  +    +  +     +    IT+   SK + + GWR G++             
Sbjct: 199 DEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS--------- 249

Query: 278 IIDSIKDCLSIY----SDIPTFIQ-GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332
               I+  +       +   TFIQ  A   + ++       ++        ++ +  + E
Sbjct: 250 --WIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE 307

Query: 333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWL 390
           +  +    KP+G+     ++     +      +F+  + KE  V V PG   G   + ++
Sbjct: 308 MG-LPTV-KPKGAFYIFPRIR----DTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYV 361

Query: 391 RIAFCAEPSALKDGLGRMKAFCQRH 415
           RI++      L++ + RM+   +  
Sbjct: 362 RISYATAYEKLEEAMDRMERVLKER 386

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  158 bits (403), Expect = 6e-45
 Identities = 75/376 (19%), Positives = 141/376 (37%), Gaps = 32/376 (8%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
             ++ L  G                A+ +A+       Y   S   P     A +     
Sbjct: 25  VGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGR- 79

Query: 102 PYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHF 158
            Y +  D   +    +G ++ +  +L  L  P   +LLP   +P Y G A+   +     
Sbjct: 80  -YGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLI 138

Query: 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
            L  +     DL AV     +    +++  P NP G V  + + +E   +ARK  + ++ 
Sbjct: 139 PLRED--GLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIH 196

Query: 219 DEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278
           D  Y    +     +P+ L G+   V+ L S+SK + + G+R G+ + ++          
Sbjct: 197 DNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEE--------A 248

Query: 279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337
           +  ++     I  +    +     + L+   ++         RE A    + +K +  +S
Sbjct: 249 LARLERVKGVIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV--LS 305

Query: 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC 395
               P  +M    +L   +     DD+EF L+L  E  V + PG   G   K ++RIA  
Sbjct: 306 LL-PPRATMYLWGRLPEGV-----DDLEFGLRLV-ERGVALAPGRGFGPGGKGFVRIALV 358

Query: 396 AEPSALKDGLGRMKAF 411
                L +   R++  
Sbjct: 359 RPLEELLEAAKRIREA 374

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  155 bits (395), Expect = 8e-44
 Identities = 73/394 (18%), Positives = 144/394 (36%), Gaps = 59/394 (14%)

Query: 41  PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100
            +  + LG G+P     F T    +DA+ +       N Y  ++     R A   +  R 
Sbjct: 22  KKRGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRR 75

Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHF 158
              +L  +++  TLG ++ +    S +        +  P P +  YEG A+  + +    
Sbjct: 76  FKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM 135

Query: 159 DLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
            L  E ++   L+  E    +    +VI+N P NP G   +   L    ++A K   +++
Sbjct: 136 PLTKENDFTPSLN--EKELQE--VDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILI 191

Query: 218 ADEVYGHLTFGSIPY-----TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI 272
            DE Y  +   + P        +    +   V+ + S+SKR   PG R G++  +     
Sbjct: 192 NDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD----- 246

Query: 273 FQKSGIIDSIKDCLS-IYSDIPTFIQGAI------PQILEKTKEDFFCKLIDTLRESAEI 325
              S +++  K   + +       IQ A        +  E  +  +          + ++
Sbjct: 247 ---SRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIY--------ANNLKL 295

Query: 326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG 385
                K             S         +L   + +   FA  L + E +I  P +Y+G
Sbjct: 296 ARKIFKNTL------IYPYSFYV------YL--PVQNGENFAKTLYQNEGIITLPALYLG 341

Query: 386 LKN----WLRIAFCAEPSALKDGLGRMKAFCQRH 415
                  ++R+A   +   L+  L  ++ + + H
Sbjct: 342 RNRIGADYVRLALVYDTPLLEKPLEIIETYRENH 375

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  155 bits (395), Expect = 1e-43
 Identities = 74/393 (18%), Positives = 145/393 (36%), Gaps = 31/393 (7%)

Query: 30  ASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA 89
              +    ++ P P++ +  G P       T     D    A+   +   Y    G    
Sbjct: 35  GKTMGRKIEHGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAF 90

Query: 90  RRAIADYLSRDLPYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG 146
           ++AI D+  R   Y ++ D   +V +  G K  +  + + +  PG  VLLP PG+  Y  
Sbjct: 91  KQAIVDFYQRQ--YNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA 148

Query: 147 IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIA 206
                  +    +L P  ++  D   V++     T  + +  P NP G+  T     E  
Sbjct: 149 GVLLADGKPVPLNLEPP-HYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAI 207

Query: 207 EMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266
              +     +V D  YG   F +   + +         I + S+SK + + G+R G+ V 
Sbjct: 208 AKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG 267

Query: 267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQ-GAIPQILEKTKEDFFCKLIDTLRESAE 324
           N          +I ++K   +   + +   +Q  AI  +     +DF  +  +  +   +
Sbjct: 268 NKD--------MIQALKKYQTHTNAGMFGALQDAAIYAL--NHYDDFLEEQSNVFKTRRD 317

Query: 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV 384
                + +          +G +   ++  P       D  +F   L +E+S++V PG   
Sbjct: 318 RFEAMLAKADL-PFV-HAKGGIYVWLETPPGY-----DSEQFEQFLVQEKSILVAPGKPF 370

Query: 385 GL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
           G     ++RI+   +   L +   R+      +
Sbjct: 371 GENGNRYVRISLALDDQKLDEAAIRLTELAYLY 403

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score =  155 bits (394), Expect = 2e-43
 Identities = 89/380 (23%), Positives = 156/380 (41%), Gaps = 33/380 (8%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
                 V+ L  G+P     F T     +  V  ++ G    Y    GI   R  IA  +
Sbjct: 37  IKKGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRI 91

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVE 154
                  +S D V VT G KQA+      L  PG  V++  P W  Y      A      
Sbjct: 92  GERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNV 151

Query: 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
           V   +    +N++  L+ VE L    T A++I +P NP G V+    L+ +  +A+K   
Sbjct: 152 V---ETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNF 208

Query: 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
            +++DEVY  L +     + + +      ++ +   SK   + GWR G+L++++      
Sbjct: 209 YIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK----- 263

Query: 275 KSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333
              +  ++    S   S I T  Q A  + LE         ++ T +E      + +K++
Sbjct: 264 ---VATAVSKIQSHTTSCINTVAQYAALKALEVDNS----YMVQTFKERKNFVVERLKKM 316

Query: 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA 393
             +    +PEG+     K+         DD++F  +L +E+ V + PG       ++R++
Sbjct: 317 G-VKFV-EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLS 367

Query: 394 FCAEPSALKDGLGRMKAFCQ 413
           F      L + L R++ F  
Sbjct: 368 FATSIERLTEALDRIEDFLN 387

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score =  153 bits (388), Expect = 1e-42
 Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 35/381 (9%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
             +V L  G+P     F T    ++A   A+  G    YA  +GIP  R A+A+   R+ 
Sbjct: 31  VDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRREN 85

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHF 158
              ++ ++  VT+G  QA+  +   +  PG  V++  P W  Y  +   A    VEV   
Sbjct: 86  GLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV--- 142

Query: 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
           + LPE  +  D + V       T A+V+ +P NP G V+    L+ +A +A +    +V+
Sbjct: 143 ETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVS 202

Query: 219 DEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276
           DE+Y HL +    ++P    G + P   +T+   +K + + GWR G+             
Sbjct: 203 DEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE------- 251

Query: 277 GIIDSIKDCLS-IYSDIPTFIQ-GAIPQIL-EKTKEDFFCKLIDTLRESAEICYDGVKEI 333
            +I ++        +   T  Q   +  +  ++    F     +  R   ++  +G+  +
Sbjct: 252 -VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310

Query: 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA 393
             +    +P G+   ++  +P       D++  A +L  E  V V PG        +R++
Sbjct: 311 G-LKAV-RPSGAFYVLMDTSPI----APDEVRAAERL-LEAGVAVVPGTDFAAFGHVRLS 363

Query: 394 FCAEPSALKDGLGRMKAFCQR 414
           +      L+  L R      R
Sbjct: 364 YATSEENLRKALERFARVLGR 384

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  149 bits (378), Expect = 5e-41
 Identities = 48/407 (11%), Positives = 114/407 (28%), Gaps = 64/407 (15%)

Query: 41  PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI----PPARRAIADY 96
                 +  GD      +    +   A++  V       Y  N           + I + 
Sbjct: 55  QGCSADVASGDGLFLEEYWKQHKEASAVL--VSPWHRMSYFFNPVSNFISFELEKTIKEL 112

Query: 97  LSRDLPYKLSADDVYVTLGCKQAVEVILSVLA--------RPGANVLLPRPGWPYYEGIA 148
                        +   +G  Q +  ++  L+         P + V+   P +P +    
Sbjct: 113 HEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQT 172

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
           +        +       W  +      +++      ++ +P NP G +        + + 
Sbjct: 173 K--------YFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLL-----RHAVIKG 219

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
            +      + D VY    +  I Y            I L ++SK     G RFGW +  D
Sbjct: 220 CK-----SIYDMVYYWPHYTPIKYKAD-------EDILLFTMSKFTGHSGSRFGWALIKD 267

Query: 269 PNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILE----------KTKEDFFCKLID 317
            +       + +++ + ++      P   Q    ++L+           T  D       
Sbjct: 268 ES-------VYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFK 320

Query: 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP------WLLEDINDDIEFALKLA 371
            LRE        + +    S    P+       +           ++   ++ +   +  
Sbjct: 321 KLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTF 380

Query: 372 KEESVIVTPGIYVGL-KNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
           +   +    G+       ++R++           +  +K   +   K
Sbjct: 381 QNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDMVKAKRK 427

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score =  146 bits (372), Expect = 3e-40
 Identities = 71/393 (18%), Positives = 130/393 (33%), Gaps = 43/393 (10%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEA-EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100
             V+ L  GD T  P   +  EA   +I           Y  + G+P  R+ +++   R 
Sbjct: 33  HTVINLSIGDTT-QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRG 91

Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-YYEGIAQRKQVEVRHFD 159
               + A +++++ G K  +  +LS    P   V +  P +P Y +        E+    
Sbjct: 92  F---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDIARLTGAKEIIALP 147

Query: 160 LLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218
            L E  +  +              ++ +  P NP G V     L+ I   A +  ++++ 
Sbjct: 148 CLQENAFFPEFPEDTH------IDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILF 201

Query: 219 DEVYGHLTFGSIPYTPMGLFGSI--VP-----VITLGSISKRWLVPGWRFGWLVTNDPNG 271
           D  Y        P  P     SI  +P      I + S SK     G R GW V      
Sbjct: 202 DAAYSTFISD--PSLPK----SIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELT 255

Query: 272 IFQKSGIIDS---IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328
                 +I          + ++      Q A    L    +    + I   RE++++   
Sbjct: 256 YADGHFVIQDWERFLS--TTFNGASIPAQEAGVAGLSILPQ---LEAIHYYRENSDLLRK 310

Query: 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-- 386
            +            E +    VK     +     D +      +E  + +TPGI  G   
Sbjct: 311 ALLATGF-EVF-GGEHAPYLWVKPTQANI----SDRDLFDFFLREYHIAITPGIGFGRSG 364

Query: 387 KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
             ++R +   +   +     R++      +  H
Sbjct: 365 SGFVRFSSLGKREDILAACERLQMAPALQSHHH 397

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score =  145 bits (368), Expect = 2e-39
 Identities = 74/404 (18%), Positives = 127/404 (31%), Gaps = 53/404 (13%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEA-EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100
             V+ LG GD T  P       A      +      ++ Y    G  P R AIA      
Sbjct: 56  AQVISLGIGDTT-EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114

Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY------------EGIA 148
               +  DDV+V+ G K  +  +  +       + +  P +P Y                
Sbjct: 115 --LGIGDDDVFVSDGAKCDISRLQVMFG-SNVTIAVQDPSYPAYVDSSVIMGQTGQFNTD 171

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGNVFTYHHLQEIAE 207
            +K   + +    PE  +  DL  V          ++    P NP G   T   L ++ E
Sbjct: 172 VQKYGNIEYMRCTPENGFFPDLSTVG------RTDIIFFCSPNNPTGAAATREQLTQLVE 225

Query: 208 MARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI--VP-----VITLGSISKRWLVPGWR 260
            A+K   ++V D  Y        P        SI  +P      +   S S      G R
Sbjct: 226 FAKKNGSIIVYDSAYAMYMSDDNPR-------SIFEIPGAEEVAMETASFSNYAGFTGVR 278

Query: 261 FGWLVTND---PNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317
            GW V       +  F  +   + I    + ++      Q      L     +   K+I 
Sbjct: 279 LGWTVIPKKLLYSDGFPVAKDFNRIIC--TCFNGASNISQAGALACLTPEGLEAMHKVIG 336

Query: 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVI 377
             +E+  I  D    +         + +    V   P          +   ++ ++  V+
Sbjct: 337 FYKENTNIIIDTFTSLGY-DVY-GGKNAPYVWVHF-PNQ-----SSWDVFAEILEKTHVV 388

Query: 378 VTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
            TPG   G   + ++R++       + +   R K   + H   H
Sbjct: 389 TTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYKHHHHHH 432

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  141 bits (357), Expect = 3e-38
 Identities = 79/407 (19%), Positives = 156/407 (38%), Gaps = 47/407 (11%)

Query: 28  SLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87
            L   +  ++  +    VPL  G+P       T     DA+  ++   +   Y   +G+P
Sbjct: 16  RLHEAMQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLP 69

Query: 88  PARRAIADYLSR--DLPYKLSADDVYVTLGCKQA-VEVILSVL----ARPGANVLLPRPG 140
             R+A A++L R  D     + +++   LG ++A    + +VL          ++ P P 
Sbjct: 70  ELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPF 129

Query: 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200
           +  YEG       E+ HF   P  ++  D  ++     K T  + + +P NP G+V    
Sbjct: 130 YQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLD 188

Query: 201 HLQEIAEMARKLRVMVVADEVYGHLTFG-----SIPYTPMGLFGSIVPVITLGSISKRWL 255
             +E+ ++  K   ++ +DE Y  + F              L  S   ++   S+SKR  
Sbjct: 189 GWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSN 248

Query: 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCK 314
           VPG R G++  +        + ++ +     +   S +   +Q A         E     
Sbjct: 249 VPGLRSGFVAGD--------AELLKNFLLYRTYHGSAMSIPVQRASIAAW--DDEQHVID 298

Query: 315 LIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374
                +E  E     ++++  +     P+ S         WL     DD+ FA  L ++ 
Sbjct: 299 NRRLYQEKFERVIPILQQVFDVK---LPDASFYI------WLKVPDGDDLAFARNLWQKA 349

Query: 375 SVIVTPGIYVGL--------KNWLRIAFCAEPSALKDGLGRMKAFCQ 413
           ++ V PG ++          + ++RIA  A+ +        + +  +
Sbjct: 350 AIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLYR 396

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score =  141 bits (357), Expect = 2e-37
 Identities = 63/444 (14%), Positives = 126/444 (28%), Gaps = 88/444 (19%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA-DYLSRD-- 100
            +               A    + +   +       Y     +      I   Y+ R+  
Sbjct: 106 SLSYVRDQLG----LDPAAFLHEMVDGILGCN----YPVPPRMLNISEKIVRQYIIREMG 157

Query: 101 LPYKLS-ADDVYVTLGCKQAVEVILSVLAR-----PGANVLLPRPGW-PYYEGI----AQ 149
                S + +++   G   A+  I   L        G  V +  P + PY E        
Sbjct: 158 ADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYA 217

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
            ++V +      P  NW+     ++ L D        +NP NP         L+ +  + 
Sbjct: 218 LEEVAIN---ADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIV 274

Query: 210 RKLR--VMVVADEVYGHLTFGSIPYTPMGLFGSIVPV-----ITLGSISKRWLVPGWRFG 262
            + R  +M++ D+VYG              F S+  +     + + S SK +   GWR G
Sbjct: 275 AEHRPDLMILTDDVYGTFADD---------FQSLFAICPENTLLVYSFSKYFGATGWRLG 325

Query: 263 WLVTNDPN------------------------------GIFQKSGIIDSIKDCLSIYSDI 292
            +  +  N                                F    + DS    L+  + +
Sbjct: 326 VVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGL 385

Query: 293 --PTFIQGAIPQILE-KTKEDFFCKLIDTLRESAEICYDGVKEIPCISC---------PN 340
             P  +Q A+  +     + D +   +  L    E        +P +            +
Sbjct: 386 STPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLID 445

Query: 341 KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNW-LRIAFCAEP- 398
             + +     +         +   +   ++A E  +++ PG   G      R +      
Sbjct: 446 LQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLANLNE 505

Query: 399 ---SALKDGLGRMKAFCQRHTKKH 419
              +A+   L +M           
Sbjct: 506 YEYAAIGRALRKMADELYAEYSGQ 529

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score =  136 bits (344), Expect = 3e-36
 Identities = 88/393 (22%), Positives = 158/393 (40%), Gaps = 39/393 (9%)

Query: 30  ASIIDSVNKNDPRP-VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           AS I  + K   RP ++    G   P  FP    A EA   I+          Y+   G 
Sbjct: 19  ASTIRELLKLTQRPGILSFAGGLPAPELFPKEEAA-EAAARILREKGEVALQ-YSPTEGY 76

Query: 87  PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG 146
            P R  +A+++       +  ++V +T G +QA++++  V    G+ VLL  P +     
Sbjct: 77  APLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQ 130

Query: 147 IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP--GNPCGNVFTYHHLQE 204
             + +           E     DLDA+E +  +     + + P   NP G +      + 
Sbjct: 131 AFRLQGPRFLTVPAGEEG---PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKR 187

Query: 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---GSIVPVITLGSISKRWLVPGWRF 261
           + +M  +  ++VV D+ Y  L FG      +           VI LGS SK  L PG R 
Sbjct: 188 LLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-VLSPGLRV 246

Query: 262 GWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321
            + V +      QK   +   K    +++  P   Q  + ++L++   +   ++    RE
Sbjct: 247 AFAVAHPE--ALQK---LVQAKQGADLHT--PMLNQMLVHELLKEGFSERLERVRRVYRE 299

Query: 322 SAEICYDGV-KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP 380
            A+     + +E+P      +P+G M   ++L   L            + A EE+V   P
Sbjct: 300 KAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGL-----SAEGL-FRRALEENVAFVP 353

Query: 381 GI--YV--GLKNWLRIAFC-AEPSALKDGLGRM 408
           G   +   G +N LR+++   +   + +G+ R+
Sbjct: 354 GGPFFANGGGENTLRLSYATLDREGIAEGVRRL 386

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score =  136 bits (344), Expect = 6e-36
 Identities = 69/408 (16%), Positives = 127/408 (31%), Gaps = 62/408 (15%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEA-EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100
             ++ LG GD T  P  +   +A   A         ++ Y    G    R A+A      
Sbjct: 69  AKIISLGIGDTT-EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGH 127

Query: 101 LPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRK------ 151
                +AD+++++ G K  +  I  +       V +  P +P Y     +          
Sbjct: 128 --AGRAADEIFISDGSKCDIARIQMMFG-SKPTVAVQDPSYPVYVDTSVMMGMTGDHNGT 184

Query: 152 -QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGNVFTYHHLQEIAEMA 209
               + +    P+ ++  DL   +         ++    P NP G   T   L E+   A
Sbjct: 185 GFDGIEYMVCNPDNHFFPDLSKAK------RTDIIFFCSPNNPTGAAATRAQLTELVNFA 238

Query: 210 RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI--VP-----VITLGSISKRWLVPGWRFG 262
           RK   ++V D  Y        P  P     +I  +P      I   S SK     G R G
Sbjct: 239 RKNGSILVYDAAYALYISN--PDCPK----TIYEIPGADEVAIETCSFSKYAGFTGVRLG 292

Query: 263 WLVTND---PNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319
           W V                 + +    + ++     +Q      L+         +I   
Sbjct: 293 WTVVPKALKYANGEPVHADWNRVMT--TCFNGASNIVQAGGLACLQPEGLKEMNAMIKFY 350

Query: 320 RESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379
           +E+A+I      E+   S     + +    V   P          +   ++ +  +++ T
Sbjct: 351 KENAQILKTTFTEMGF-SVY-GGDDAPYIWVGF-PGK-----PSWDVFAEILERCNIVTT 402

Query: 380 PGI--------YVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419
           PG         +V      R +       + + + R K    +    H
Sbjct: 403 PGSGYGPAGEGFV------RASAFGSRENILEAVRRFKEAYGKRNASH 444

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score =  134 bits (340), Expect = 5e-35
 Identities = 84/447 (18%), Positives = 153/447 (34%), Gaps = 89/447 (19%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
            V   + +              + +  AV +     Y            I +Y  ++L Y
Sbjct: 105 AVNYCHTELG----LNRDKVVAEWVNGAVANN----YPVPDRCLVNTEKIINYFLQELSY 156

Query: 104 K----LSADDVYVTLGCKQAVEVILSVLAR-----PGANVLLPRPGWPYYEGI---AQRK 151
           K        D++ T G   A+      LA       G  + +  P +  Y  I      +
Sbjct: 157 KDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYE 216

Query: 152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211
            VEV       + +WE++ + +E L D +  A++++NP NP    F  + L  I +   K
Sbjct: 217 LVEV-DLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEK 275

Query: 212 -LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV-----ITLGSISKRWLVPGWRFGWL- 264
             ++M+++DEVYG              F SI  V     + + S SK +   GWR G + 
Sbjct: 276 NPKLMIISDEVYGAFVPN---------FKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIA 326

Query: 265 ----------------------------VTNDPNGI-FQKSGIIDSIKDCLSIYSDIPTF 295
                                       V  DP+ + F      DS    L   + + T 
Sbjct: 327 LNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTP 386

Query: 296 IQG-----AIPQILEKTKEDFFCKLIDTLRESAEICYDG-VKEIPCISCPNKPEGSMVTM 349
            Q      ++  +L  T        ID  R+     YD     +              ++
Sbjct: 387 QQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQAPKDETDTNTHYYSL 446

Query: 350 VKLNPWL-----------LEDINDDIEFALKLAKEESVIVTPGIYVGLKNW-LRIAFCAE 397
           + +               L +  + ++F LKLA++  V++  G+  G K   LR++    
Sbjct: 447 IDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANL 506

Query: 398 PSALKDGLGR-----MKAFCQRHTKKH 419
           P+     +G+     +K + +   + +
Sbjct: 507 PTEDYALIGKQVLELLKEYYEEFKQNN 533

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score =  132 bits (335), Expect = 6e-35
 Identities = 84/414 (20%), Positives = 149/414 (35%), Gaps = 47/414 (11%)

Query: 30  ASIIDSVNKNDPRP-VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           +SII  + K       +  G G  DP  FP  +   E    I++         Y+T  G 
Sbjct: 30  SSIIREILKFAADKDAISFGGGVPDPETFP-RKELAEIAKEIIEKEYHYTLQ-YSTTEGD 87

Query: 87  PPARRAIADYLSRDL-PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
           P  ++ I   L R      L  D++  T+G +QA+++I  +     +  +L  P +    
Sbjct: 88  PVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI 147

Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP---------GNPCGNV 196
              ++         L  +    +DL+ +E    +      I             NP G  
Sbjct: 148 NAFRQYLANFVVVPLEDDG---MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVT 204

Query: 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV 256
            +    + + E+A K  + +V D+ YG L +      P+   G    V+ L + SK  L 
Sbjct: 205 TSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSK-VLA 263

Query: 257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILEKTK-EDFFC 313
           PG R G +  +           I  I       +D+  P        + LE+    +   
Sbjct: 264 PGLRIGMVAGSKE--------FIRKIVQAKQS-ADLCSPAITHRLAARYLERYDLLEQLK 314

Query: 314 KLIDTLRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALK 369
             I+  R    +  + ++E    IP +    K EG +   + L         D  E   +
Sbjct: 315 PTIELYRRKRTVMLNALEEYFSDIPGVKW-VKSEGGLFIWLTLPEGF-----DTWEM-FE 367

Query: 370 LAKEESVIVTPGI--YV--GLKNWLRIAFC-AEPSALKDGLGRMKAFCQRHTKK 418
            AK + V   PG    V       +R++FC      + +G+ R++     + K+
Sbjct: 368 YAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKE 421

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  132 bits (334), Expect = 1e-34
 Identities = 68/408 (16%), Positives = 130/408 (31%), Gaps = 52/408 (12%)

Query: 38  KNDPRP-VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY 96
             + +        G  T     +    + DA+ + +   +   YA   GI   R      
Sbjct: 42  SAEAKSTTYNATIGMAT-NKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQK 100

Query: 97  LSRD---LPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQ 152
           + RD   L    +     VT      + ++  +       +LLP   W  Y+ +   R  
Sbjct: 101 MLRDNPELSID-NMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNG 159

Query: 153 VEVRHFDLLPERNWEVDLDA-VEALADK-NTAAMVIIN-PGNPCGNVFTYHHLQEIAEMA 209
             ++ + +  +++     D+ VEAL        ++I+N P NP G   T+  +  I E  
Sbjct: 160 ANLQTYPIF-DKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAI 218

Query: 210 RKLR-----VMVVADEVYGHLTFG-----SIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259
           + L      V+ V D+ Y  L +      S+      L  + +  I L   +K +   G+
Sbjct: 219 KALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGF 278

Query: 260 RFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE--------- 309
           R G++     +    K  +   +K  + S  S  P   Q A+  +L+  K+         
Sbjct: 279 RVGFMTFGTSDQT-TKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNI 337

Query: 310 DFFCKLIDTLRESAEICYDGVKE--IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFA 367
               +  +  +   E+ Y                        +K++        D     
Sbjct: 338 QTLKERYEVTK---EVVYADQYHSHWQAY----DFNSGYFMAIKVHD------VDPEALR 384

Query: 368 LKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSA-LKDGLGRMKAFCQR 414
             L  + S+ V           +RIAF       +      +      
Sbjct: 385 KHLIDKYSIGVIALNATD----IRIAFSCVEKDDIPHVFDSIAKAIDD 428

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score =  130 bits (330), Expect = 3e-34
 Identities = 79/406 (19%), Positives = 148/406 (36%), Gaps = 51/406 (12%)

Query: 30  ASIIDSVNKNDPRP------VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNC-- 79
            S +  V K           ++ L  G  DP   P           I   V   +     
Sbjct: 16  GSALADVMKKASELQKKGVKLISLAAGDPDPELIP-----RAVLGEIAKEVLEKEPKSVM 70

Query: 80  YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139
           Y   +GIP  R  +A +L +    ++S +++ +T+G   A++++  VL  PG  V+   P
Sbjct: 71  YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENP 130

Query: 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM-------VIINPGNP 192
            +       ++   ++    +  +    + +D +E    +  A          I    NP
Sbjct: 131 SYINTLLAFEQLGAKIEGVPVDNDG---MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNP 187

Query: 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252
            G   +    + + E+A K  ++++ D  Y  + +      P+    +   VI  G++SK
Sbjct: 188 MGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSK 247

Query: 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILEKTKED 310
             L  G+R GW++            I+  +        D   P   Q    + L++   +
Sbjct: 248 V-LGTGFRIGWIIAEGE--------ILKKVLMQKQP-IDFCAPAISQYIALEYLKRGYFE 297

Query: 311 FF--CKLIDTLRESAEICYDGV-KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFA 367
            +     +   +E  +I    +   +P      KP   M  M  L         D I FA
Sbjct: 298 KYHLEGALLGYKEKRDIMLKALENHLPNAEF-TKPIAGMFVMFFLPEGA-----DGISFA 351

Query: 368 LKLAKEESVIVTPGI--YV--GLKNWLRIAFC-AEPSALKDGLGRM 408
            +L + E V+V PG   Y     KN +R+ F       +  G+ ++
Sbjct: 352 NELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL 397

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score =  128 bits (324), Expect = 3e-33
 Identities = 83/398 (20%), Positives = 154/398 (38%), Gaps = 41/398 (10%)

Query: 30  ASIIDSVNKNDPRP-VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           AS +  + K      ++ L  G  +P  FP      +    I++         Y T  G 
Sbjct: 63  ASEVRELLKLVETSDIISLAGGLPNPKTFPKEIIR-DILVEIMEKYADKALQ-YGTTKGF 120

Query: 87  PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG 146
            P R  +  +L +        +D+ +T G +QA+++I  V   PG  V++  P +     
Sbjct: 121 TPLRETLMKWLGKRYG-ISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ 179

Query: 147 IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA-----MVIINP--GNPCGNVFTY 199
                + +     L  E    + ++ +E    +  +      +V   P   NP G     
Sbjct: 180 AFNFYEPQYIQIPLDDEG---MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNE 236

Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259
              + + E+A +   +VV D+ YG L +   P   +    +   VI LG+ SK  L PG+
Sbjct: 237 DRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGF 295

Query: 260 RFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILEKTK-EDFFCKLI 316
           R GW+V +          II  ++      +D+    F Q    + ++    E    ++ 
Sbjct: 296 RIGWMVGDPG--------IIRKMEIAKQS-TDLCTNVFGQVVAWRYVDGGYLEKHIPEIR 346

Query: 317 DTLRESAEICYDGV-KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375
              +   +   + + + +P      KPEG M   V L   +     D  +  L+ A ++ 
Sbjct: 347 KFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGI-----DSKKM-LERAIKKG 400

Query: 376 VIVTPGI--YV--GLKNWLRIAFC-AEPSALKDGLGRM 408
           V   PG   Y    +KN +R+ F   +   + +G+ R+
Sbjct: 401 VAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 438

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  124 bits (312), Expect = 5e-32
 Identities = 62/398 (15%), Positives = 114/398 (28%), Gaps = 62/398 (15%)

Query: 41  PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA-----RRAIAD 95
              VV L +GDPTA+  +   +     +         + ++  + +          AI D
Sbjct: 21  SDFVVNLDHGDPTAYEEYWRKMGDRCTVTIR-GCDLMSYFSDMTNLCWFLEPELEDAIKD 79

Query: 96  YLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA----NVLLPRPGWPYYEGIAQRK 151
                         + V  G  Q  +  +  L+        +V+   P +  Y       
Sbjct: 80  LHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEET--- 136

Query: 152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211
                    +    ++ + DA      K     ++ +P NP G +      + +      
Sbjct: 137 -------TYVRSGMYKWEGDA-WGFDKKGPYIELVTSPNNPDGTI-----RETVVNRPDD 183

Query: 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDPN 270
               V+ D  Y    +  I               I L + SK     G R GW +  D  
Sbjct: 184 DEAKVIHDFAYYWPHYTPITRR--------QDHDIMLFTFSKITGHAGSRIGWALVKDKE 235

Query: 271 GIFQKSGIIDSIKDCLSIYS-DIPTFIQGAIPQILE---------KTKEDFFCKLIDTLR 320
                  +   + + + + S  +    Q    +IL             E+FF    + ++
Sbjct: 236 -------VAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMK 288

Query: 321 ESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNP-----WLLEDINDDIEFALKLAKEE 374
              E   + VKE    + P             L       WL      D+   L   +  
Sbjct: 289 NRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSEL---RRH 345

Query: 375 SVIVTPGIYVGL-KNWLRIAFCAEPSALKDGLGRMKAF 411
            V+   G   G  K  +R++  +        L R+   
Sbjct: 346 KVMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLANM 383

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score =  110 bits (276), Expect = 8e-27
 Identities = 83/404 (20%), Positives = 140/404 (34%), Gaps = 58/404 (14%)

Query: 44  VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNC---YATNSGIPPARRAIADYLS 98
           ++ L  G  +P  FP     +  E+                Y+ ++GIP     +     
Sbjct: 33  MISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQLQI 92

Query: 99  R-------DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRK 151
           +         P      D+ VT G +Q +  +  ++  PG NVLL  P +          
Sbjct: 93  KLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPL 152

Query: 152 QVEVRHFD-----LLPE------RNWEVDLDAVEALADKNTAAMVIINP--GNPCGNVFT 198
              + +       ++P+        W+           KNT   +   P   NP GN  T
Sbjct: 153 GCNIINVASDESGIVPDSLRDILSRWK---PEDAKNPQKNTPKFLYTVPNGNNPTGNSLT 209

Query: 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258
               +EI E+ARK   +++ D+ Y  L F                VI   S SK  +  G
Sbjct: 210 SERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKI-ISSG 268

Query: 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILEKTKEDFFCKLI 316
            R G+L    P        +I+ +   + + S +   TF Q  I Q+L +  E+ F   +
Sbjct: 269 LRIGFLTGPKP--------LIERVILHIQV-STLHPSTFNQLMISQLLHEWGEEGFMAHV 319

Query: 317 DTLRES----AEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKL 370
           D + +      +       +         + P   M   +K+       IND  E   + 
Sbjct: 320 DRVIDFYSNQKDAILAAADKWLTGLAEW-HVPAAGMFLWIKVK-----GINDVKELIEEK 373

Query: 371 AKEESVIVTPGI--YV---GLKNWLRIAFC-AEPSALKDGLGRM 408
           A +  V++ PG   YV       +LR +F  A P  +      +
Sbjct: 374 AVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVL 417

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score =  109 bits (275), Expect = 1e-26
 Identities = 56/359 (15%), Positives = 104/359 (28%), Gaps = 56/359 (15%)

Query: 85  GIPPARRAIADYLSRDLPY-------KLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137
           G+P AR   A YL              L    + +T      V             +++ 
Sbjct: 71  GLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVT 130

Query: 138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE-ALADKNTAAMVIINP--GNPCG 194
            PG+  +  + Q    E+   D+  +     D+DAVE       +   ++  P   NP G
Sbjct: 131 VPGYDRHFLLLQTLGFELLTVDMQSDG---PDVDAVERLAGTDPSVKGILFVPTYSNPGG 187

Query: 195 NVFTYHHLQEIAEM-ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-------VIT 246
              +    + +A + A      + AD+ Y               F  +            
Sbjct: 188 ETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFV 247

Query: 247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQIL 304
             S SK     G   G++ +++ N        I  +   L     I      Q    + L
Sbjct: 248 FASTSKI-TFAGAGLGFVASSEDN--------IRWLSKYLGA-QSIGPNKVEQARHVKFL 297

Query: 305 EKTK---EDFFCKLIDTLRESAEICYDGVKEI-----PCISCPNKPEGSMVTMVKLNPWL 356
            +     E         +        + ++          +    P+G     +      
Sbjct: 298 TEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATW-TLPKGGYFISLD----T 352

Query: 357 LEDINDDIEFALKLAKEESVIVTPGI--YV----GLKNWLRIAFC-AEPSALKDGLGRM 408
            E + D +   +KLA+   V +TP    Y          LR+A        ++  +  +
Sbjct: 353 AEPVADRV---VKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVV 408

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score =  104 bits (260), Expect = 1e-24
 Identities = 65/415 (15%), Positives = 113/415 (27%), Gaps = 57/415 (13%)

Query: 30  ASIIDSVNKNDPRP-VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNC--YATNS 84
             I    ++   +   + L  G         F   + A     D   +   +   Y    
Sbjct: 20  EDIKRKFDELKSKNLKLDLTRGKPSSEQLD-FADELLALPGKGDFKAADGTDVRNYGGLD 78

Query: 85  GIPPARRAIADYLSRDLPYKLSAD--------DVYVTLGCKQAVEVILSVLARPGANVLL 136
           GI   R+  AD L   +   L+ D        DV          + +           + 
Sbjct: 79  GIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWIC 138

Query: 137 PRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP--GNPCG 194
           P PG+  +  I +R   E+    +  +     D+DAVE L        + + P   NP G
Sbjct: 139 PVPGYDRHFSITERFGFEMISVPMNEDG---PDMDAVEELVKNPQVKGMWVVPVFSNPTG 195

Query: 195 NVFTYHHLQEIAEMARKLR-VMVVADEVYGHLTFGSIPYTPMGLFGSIVP------VITL 247
              T    + ++ M        VV D  Y   T        + + G              
Sbjct: 196 FTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAF 255

Query: 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAIPQILE 305
            S SK   + G    + +T+  N                 I   I      Q A  +   
Sbjct: 256 TSTSKI-TLAGAGVSFFLTSAEN--------RKWYTGHAGI-RGIGPNKVNQLAHARYFG 305

Query: 306 KTK--EDFFCKLIDTLRESAEICYDGV-KEIPCISCP--NKPEGSMVTMVKLNPWLLEDI 360
             +       K   +L        + +   +          P G     +     ++   
Sbjct: 306 DAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLD----VVPGT 361

Query: 361 NDDIEFALKLAKEESVIVTPG--IYV----GLKNWLRIAFC-AEPSALKDGLGRM 408
              +    +LAKE  + +T     Y          LR+A        L+  +  +
Sbjct: 362 ASRV---AELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGV 413

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score =  103 bits (259), Expect = 2e-24
 Identities = 65/420 (15%), Positives = 111/420 (26%), Gaps = 70/420 (16%)

Query: 30  ASIIDSVNKNDPRP-VVPLGYG--DPTAFPCFRTAV-EAEDAIVDAVRSGKFNCYATNSG 85
             +     +   +   + L  G             +                N Y    G
Sbjct: 19  EEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRN-YGGLLG 77

Query: 86  IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVIL--------------SVLARPG 131
           I   R   A+ L       L AD V    G    +   L                 A   
Sbjct: 78  IADIRELWAEALG------LPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEK 131

Query: 132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP-- 189
              L P PG+  +  I +    E+ +  +  E     D+  V  L        +   P  
Sbjct: 132 VKWLCPVPGYDRHFTITEHFGFEMINVPMTDEG---PDMGVVRELVKDPQVKGMWTVPVF 188

Query: 190 GNPCGNVFTYHHLQEIAEMARKLR-VMVVADEVYGHLTFGSIPYTPMGLFGSIVP----- 243
           GNP G  F+    +E+AEM+       +V D  Y   T          +           
Sbjct: 189 GNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPN 248

Query: 244 -VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--PTFIQGAI 300
               + S SK     G    +  ++  N        I+      ++   I      Q A 
Sbjct: 249 RFWFMSSTSKI-THAGSGVSFFASSKEN--------IEWYASHANV-RGIGPNKLNQLAH 298

Query: 301 PQILEKTK--EDFFCKLIDTLRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNP 354
            Q        +    K   +L    E   + +               P G     V    
Sbjct: 299 AQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKW-TSPTGGYFISVD--- 354

Query: 355 WLLEDINDDIEFALKLAKEESVIVTPG-----IYVGLKNW-LRIAFC-AEPSALKDGLGR 407
            ++      +   ++LAKE  + +T       ++    N  +R+A      + L+  +  
Sbjct: 355 -VVPGTASRV---VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDG 410

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 95.3 bits (238), Expect = 1e-21
 Identities = 66/371 (17%), Positives = 148/371 (39%), Gaps = 44/371 (11%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA-RRAIADYLSRDLPYKLSADDVYVTLGC 116
           F    E ++AI++  R   F  Y   +       +A+ D+  ++  Y +  +D+    G 
Sbjct: 73  FLPVPEIKEAIINYGREHIFG-Y---NYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGV 128

Query: 117 KQAVEVILSVLARPGANVLLPRPGW-PYYEGI--AQRKQVEVRHFDLLPERN-WEVDLDA 172
             A+ + L   +  G  VL+  P + P+   I     + VE     L      +E+D + 
Sbjct: 129 VPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVEN---SLQIINGRFEIDFEQ 185

Query: 173 VEA-LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231
           +E  + D N    ++ +P NP G V+    L +IAE+ +K  V++V+DE++  L      
Sbjct: 186 LEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT 245

Query: 232 YTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPN-----GIFQKSGIIDS 281
           +       ++        I L S +K + + G +  + +  + +        Q +     
Sbjct: 246 HHS---LNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHE 302

Query: 282 IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK 341
           +   + + +    F  G          + +  +L   +  + ++    ++    I    +
Sbjct: 303 V-PTVGMIATQAAFQYG----------KPWLEELKTVIEGNIKLVIKELEAKTKIK-VME 350

Query: 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPS 399
           PEG+ +  +  + + +       + + KL  E  V++  G + G   K + R+      +
Sbjct: 351 PEGTYLVWLDFSAYAI----AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKN 406

Query: 400 ALKDGLGRMKA 410
            +++ L R+ +
Sbjct: 407 TVQEALSRIIS 417

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 94.5 bits (236), Expect = 2e-21
 Identities = 67/378 (17%), Positives = 141/378 (37%), Gaps = 54/378 (14%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA-RRAIADYLSRDLPYKLSADDVYVTLGC 116
           F T      AI DAV+   F  Y           +A A++ +    Y+   + ++     
Sbjct: 35  FSTCPAVLQAITDAVQREAFG-Y---QPDGSLLSQATAEFYADRYGYQARPEWIFPIPDV 90

Query: 117 KQAVEVILSVLARPGANVLLPRPGW-PYYEGI--AQRKQVEVRHFDLLPERNWEVDLDAV 173
            + + + +       + V++P P + P++  +   QR+ + +       +    ++L  V
Sbjct: 91  VRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFI-------DATGGINLHDV 143

Query: 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT 233
           E        ++++ NP NP G VF    L E+ ++A +    V+ DE++  L F    +T
Sbjct: 144 EKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG-QHT 202

Query: 234 PMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPN--GIFQK--SGIIDSIKD 284
                  +        IT+ + SK W + G +   ++ ++P+    +Q+    I D    
Sbjct: 203 V---AAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGA-S 258

Query: 285 CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPE 343
            L + +    +  G           DF  + +  L+ + +     + + IP        +
Sbjct: 259 TLGLIAAEAAYRYG----------TDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQ 307

Query: 344 GS--MVTMVKLNPWL-LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEP 398
            +  M        W+   D   +   +    ++  V +  G + G     + R+ F    
Sbjct: 308 ATYLM--------WIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSR 359

Query: 399 SALKDGLGRMKAFCQRHT 416
             L++ + RM      HT
Sbjct: 360 EVLEEAIDRMAKAVSHHT 377

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 93.4 bits (233), Expect = 3e-21
 Identities = 62/307 (20%), Positives = 129/307 (42%), Gaps = 36/307 (11%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
            ++I +Y       KL    + +  G   A E+I  +       +L+  P +  YE  A+
Sbjct: 67  NKSIENY------LKLKDIGIVLGNG---ASEII-ELSISLFEKILIIVPSYAEYEINAK 116

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYHHLQEIAEM 208
           +  V V    L  + N  +D + + +  D      VII NP NP G +        + ++
Sbjct: 117 KHGVSVVFSYL--DENMCIDYEDIISKIDDVD--SVIIGNPNNPNGGLINKEKFIHVLKL 172

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
           A + +  ++ DE +   T G    + +G   +   +  + +++K + +PG RFG+ +TN+
Sbjct: 173 AEEKKKTIIIDEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231

Query: 269 PNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328
                    I   IK   + ++ I  F + A    L+    ++  + +  +++  +   +
Sbjct: 232 KE-------IAAKIKAKQNPWN-INCFAEMAAINCLK--DTNYIEESLLWIKKERKRFIE 281

Query: 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVGL- 386
            + +I  I     P  + V + +L     E + D       L K E +++     ++GL 
Sbjct: 282 ELNKIGFIKRVFSPHANFV-LCRLENISGEKLYD------SLLK-EDIVIRRCCNFIGLD 333

Query: 387 KNWLRIA 393
            +++R A
Sbjct: 334 DSFVRFA 340

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 93.7 bits (234), Expect = 3e-21
 Identities = 71/380 (18%), Positives = 140/380 (36%), Gaps = 43/380 (11%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA-RRAIADYLSRDLPYKLSADDVYVTLGC 116
           F+   E  + +   +       Y   +G     ++ +  ++     + +  D +  T G 
Sbjct: 43  FKNPPELIEGLKKYLDETVLG-Y---TGPTEEYKKTVKKWMKDRHQWDIQTDWIINTAGV 98

Query: 117 KQAVEVILSVLARPGANVLLPRPGW-PYYEGI--AQRKQVEVRHFDLLPERN-WEVDLDA 172
             AV   +    +PG  V++  P + P++  I   +RK +E    +LL +   + +D   
Sbjct: 99  VPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC---ELLEKDGYYTIDFQK 155

Query: 173 VEA-LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231
           +E    DKN  A++  +P NP G V+    LQ+I ++  K  +M+ +DE++  L      
Sbjct: 156 LEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYE 215

Query: 232 YTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPN--GIFQKSGIIDSIKD 284
           +T    F SI        IT  + SK + + G     ++  +P+    F KS    S   
Sbjct: 216 HTV---FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMP 272

Query: 285 C--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNK 341
              L   +    + +             +    I  + ++  I  D  +   P I     
Sbjct: 273 FTTLGYKACEICYKEC----------GKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APL 321

Query: 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPS 399
            EG+ +  +      +    D       +  +  +    G   G     + RI   A  S
Sbjct: 322 IEGTYLQWIDFRALKM----DHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSS 377

Query: 400 ALKDGLGRMKAFCQRHTKKH 419
            +++ L R+    +    +H
Sbjct: 378 VIQESLERLNKALKDLKNRH 397

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 93.0 bits (232), Expect = 6e-21
 Identities = 67/371 (18%), Positives = 144/371 (38%), Gaps = 43/371 (11%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA-RRAIADYLSRDLPYKLSADDVYVTLGC 116
           F    E + AI D      +  Y   +       +A+ D+   +  Y    +D+    G 
Sbjct: 43  FEVMPEVKQAIHDYAEQLVYG-Y---TYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGV 98

Query: 117 KQAVEVILSVLARPGANVLLPRPGW-PYYEGI--AQRKQVEVRHFDLLPERN-WEVDLDA 172
             A+ + +    + G  VL+  P + P+   +    RK V      L  E   +++D + 
Sbjct: 99  VPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSN---SLKEENGLFQIDFEQ 155

Query: 173 VEA-LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231
           +E  + + +    ++ NP NP G V+    L++I  + +K  V++V+DE++  LT     
Sbjct: 156 LENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHE 215

Query: 232 YTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPN--GIFQKSGIIDSIKD 284
           +     F ++ P      + L S +K + + G +  + +  +P     F+   ++++  +
Sbjct: 216 HVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHE 272

Query: 285 C--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNK 341
              L   +    +  G          + +   L   L E+ +   +   +  P +    K
Sbjct: 273 VSSLGYIATETAYRYG----------KPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMK 321

Query: 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPS 399
           P+G+ +  +  + + L     D      L  +  VI+  G   G   +   R+   A  S
Sbjct: 322 PQGTYLIWLDFSDYGL----TDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKS 377

Query: 400 ALKDGLGRMKA 410
            +++   R+  
Sbjct: 378 LVEEICKRIVC 388

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 93.0 bits (232), Expect = 6e-21
 Identities = 74/371 (19%), Positives = 145/371 (39%), Gaps = 44/371 (11%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA--RRAIADYLSRDLPYKLSADDVYVTLG 115
           F TA    +A+   +  G F  Y   S         AIA + S      + +  V     
Sbjct: 40  FATAPCIIEALNQRLMHGVFG-Y---SRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPS 95

Query: 116 CKQAVEVILSVLARPGANVLLPRPGW-PYYEGI--AQRKQVEVRHFDLLPERN-WEVDLD 171
               V  ++   +  G  V++  P +  +Y+ I   QR  + V    L  + + W  D+ 
Sbjct: 96  VIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPV---ALEKQADGWFCDMG 152

Query: 172 AVEA-LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI 230
            +EA LA      M++ +P NP G V+T   L+ +A++  +  V V++DE++  + +G  
Sbjct: 153 KLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ 212

Query: 231 PYTPMGLFGSIVP--VITLGSISKRWLVPGWRFGWLVTNDP------NGIFQKSGIIDSI 282
           P+ P   + ++       L S SK + +P     + +  +           +    + S 
Sbjct: 213 PHIP---WSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSP 269

Query: 283 KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNK 341
              L++ + I  + QG            +   L   L+++     D +    P ++    
Sbjct: 270 -SVLALTAHIAAYQQG----------APWLDALRIYLKDNLTYIADKMNAAFPELN-WQI 317

Query: 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPS 399
           P+ + +  + L P  +    DD      L ++E V + PG   G   + ++R+      S
Sbjct: 318 PQSTYLAWLDLRPLNI----DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRS 373

Query: 400 ALKDGLGRMKA 410
            L+ G+  +  
Sbjct: 374 KLEKGVAGLIN 384

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 92.6 bits (231), Expect = 7e-21
 Identities = 68/371 (18%), Positives = 151/371 (40%), Gaps = 44/371 (11%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA-RRAIADYLSRDLPYKLSADDVYVTLGC 116
           F+ A    D++ + +    +  Y   +  P +   +I ++L R   +K+ ++ +  + G 
Sbjct: 44  FKAAPCIIDSLKNRLEQEIYG-Y---TTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGV 99

Query: 117 KQAVEVILSVLARPGANVLLPRPGW-PYYEGI--AQRKQVEVRHFDLLPERN--WEVDLD 171
             A+ ++++ L +    +++  P + P+   +    R+ +      L    N  + +D +
Sbjct: 100 IPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIIS---PLQKLENGNYIMDYE 156

Query: 172 AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231
            +E    K+    ++ NP NP G V+T   L+++ ++  K  V +++DE++  +      
Sbjct: 157 DIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHK 215

Query: 232 YTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPN--GIFQKSGIIDSIKD 284
           + P     SI        IT  + +K + + G +  ++V  D     +   +     IK 
Sbjct: 216 HIP---MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKR 272

Query: 285 C--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNK 341
               S+ +   ++  G          E +    ++ L  + +     + E +P +    K
Sbjct: 273 NNCFSLVATEASYNNG----------ESWLESFLEYLESNIDFAIKYINENMPKLK-VRK 321

Query: 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPS 399
           PEG+ +  V  +   L     D E    L ++  V +  G   G+    + RI      S
Sbjct: 322 PEGTYLLWVDFSALGL----SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRS 377

Query: 400 ALKDGLGRMKA 410
            L++ L R+K 
Sbjct: 378 MLEEALIRIKN 388

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 92.2 bits (230), Expect = 1e-20
 Identities = 73/371 (19%), Positives = 154/371 (41%), Gaps = 43/371 (11%)

Query: 58  FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA-RRAIADYLSRDLPYKLSADDVYVTLGC 116
           F+ A E   ++ + ++   F  Y     +P    +A+AD+   +   +   D      G 
Sbjct: 39  FKIAPEIMASMEEKLKVAAFG-Y---ESVPAEYYKAVADWEEIEHRARPKEDWCVFASGV 94

Query: 117 KQAVEVILSVLARPGANVLLPRPGW-PYYEGI--AQRKQVEVRHFDLLPERN-WEVDLDA 172
             A+  ++     PG  +L+  P +  +Y  I    R+ +     DL+ E + + V+   
Sbjct: 95  VPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISS---DLIYENSKYSVNWAD 151

Query: 173 VEA-LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231
           +E  LA  +   MV  NP NP G  ++   ++ IAE+  K +V++++DE++G L      
Sbjct: 152 LEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDED 211

Query: 232 YTPMGLFGSIVP-----VITLGSISKRWLVPGWRFGWLVTNDPN--GIFQKSGIIDSIKD 284
            TP     ++       V++L S SK + +        +  +P+     ++S  +  I +
Sbjct: 212 ITP---AFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGE 268

Query: 285 C--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNK 341
              L+I + I  + +G           D+  +L   LR++     + + + +P +     
Sbjct: 269 PNLLAIPAAIAAYEEG----------HDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLD 317

Query: 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPS 399
              S +  V ++   +    +  +F   L ++  +I++ G         ++RI       
Sbjct: 318 SNASYLAWVDISALGM----NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKE 373

Query: 400 ALKDGLGRMKA 410
            + DG+ R+K 
Sbjct: 374 LVIDGMQRLKQ 384

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score = 85.7 bits (213), Expect = 1e-18
 Identities = 55/315 (17%), Positives = 112/315 (35%), Gaps = 51/315 (16%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI-LSVLARPGANVLLPRPGWPYYEGIA 148
            +A+A +      +++ A  +    G     E I            ++  PG+  Y    
Sbjct: 65  HQALARH------HQVPASWILAGNG---ETESIFTVASGLKPRRAMIVTPGFAEYGRAL 115

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYHHLQEIAE 207
            +   E+R + L     W++    +EAL        + +  P NP G +     LQ IA+
Sbjct: 116 AQSGCEIRRWSLREADGWQLTDAILEALTPD--LDCLFLCTPNNPTGLLPERPLLQAIAD 173

Query: 208 MARKLRVMVVADEVYGHLTFGSIPYTP-----MGLFGSIVPVITLGSISKRWLVPGWRFG 262
             + L + ++ DE +       I + P     +        +  L S++K + +PG R G
Sbjct: 174 RCKSLNINLILDEAF-------IDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLG 226

Query: 263 WLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES 322
           +LV +D          +  ++     +S +      A    L+     +       LRE 
Sbjct: 227 YLVNSDDA-------AMARMRRQQMPWS-VNALAALAGEVALQ--DSAWQQATWHWLREE 276

Query: 323 AEICYDGVKEIPCISCPNKPEGSMV--TMVKLNPWLLEDINDDIEFALKLAKEESVIVTP 380
               Y  + ++P +              +++          +DI+   +L   + +++  
Sbjct: 277 GARFYQALCQLPLL----TVYPGRANYLLLRCE-------REDIDLQRRLLT-QRILIRS 324

Query: 381 -GIYVGL-KNWLRIA 393
              Y GL   + R+A
Sbjct: 325 CANYPGLDSRYYRVA 339

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score = 83.0 bits (206), Expect = 9e-18
 Identities = 62/314 (19%), Positives = 113/314 (35%), Gaps = 52/314 (16%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA-NVLLPRPGWPYYEGIA 148
               A Y        +  + V V+ G  + +E+++     PG   +L   P +  Y   A
Sbjct: 64  IENYAQY------AGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA 117

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
           +   VE R    L   NW++DL  +    D     + + +P NP G +      + + E+
Sbjct: 118 ETIGVECRTVPTLD--NWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLEL 174

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP----VITLGSISKRWLVPGWRFGWL 264
            R  + +VVADE Y       I + P       +     +  L ++SK + + G R G+ 
Sbjct: 175 TRG-KAIVVADEAY-------IEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFT 226

Query: 265 VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324
           + N+         +I+ +   ++ Y  + T +     Q L         + +  +    E
Sbjct: 227 LANEE--------VINLLMKVIAPYP-LSTPVADIAAQALSPQGIVAMRERVAQIIAERE 277

Query: 325 ICYDGVKEIPCI-----SCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379
                +KEIPC+     S  N              ++L            L  ++ +I+ 
Sbjct: 278 YLIAALKEIPCVEQVFDSETN--------------YILARFKASSAVFKSLW-DQGIILR 322

Query: 380 P-GIYVGLKNWLRI 392
                  L   LRI
Sbjct: 323 DQNKQPSLSGCLRI 336

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score = 78.7 bits (195), Expect = 3e-16
 Identities = 46/309 (14%), Positives = 98/309 (31%), Gaps = 48/309 (15%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI-LSVLARPGANVLLPRPGWPYYEGIA 148
           R+ +A          +  + + VT G             A  G+  L+  P +  YE   
Sbjct: 56  RQMLAKR------NSVDNNAILVTNG---PTAAFYQIAQAFRGSRSLIAIPSFAEYEDAC 106

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
           +  + EV  +    +       +A       N     + NP NP G +     +  +   
Sbjct: 107 RMYEHEVCFYPSNED-----IGEAD----FSNMDFCWLCNPNNPDGRLLQRTEILRLLN- 156

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268
                   V D+ Y    F +              ++ + S S  + +PG R G++V N 
Sbjct: 157 -DHPDTTFVLDQSYVS--FTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN- 212

Query: 269 PNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328
                     +  +    + ++ +      A   IL       F   I   + +      
Sbjct: 213 -------KDFMKRVAAFSTPWA-VNALAIEAAKFILI--HPAQFTLPIRKWQRNTVDFIT 262

Query: 329 GVKEIPCISCPNKPEGSMVT--MVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVG 385
            +  +  +    +   S  T  +++L            E    + +E ++++     + G
Sbjct: 263 ALNRLDGV----EVHPSGTTFFLLRLKK------GTAAELKKYMLEEYNMLIRDASNFRG 312

Query: 386 L-KNWLRIA 393
           L ++++RI 
Sbjct: 313 LDESYVRIT 321

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score = 78.4 bits (194), Expect = 4e-16
 Identities = 39/206 (18%), Positives = 80/206 (38%), Gaps = 11/206 (5%)

Query: 63  EAEDAIVDAVR--SGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
                +V  V   + + N Y         R  +A Y+++     ++ D+++   G  + +
Sbjct: 47  ALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEIL 105

Query: 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV-EALADK 179
           + +L     PG   L  +P +  +  +A+    E          ++ +D+D   E +  K
Sbjct: 106 QQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGA--DFRIDMDVALEEIRAK 163

Query: 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239
               + +  P NP G+V +   L ++  +      +V+ DE Y    F   P     L  
Sbjct: 164 QPDIVFVTTPNNPTGDVTS---LDDVERIINVAPGIVIVDEAYAE--FSPSPSATTLLEK 218

Query: 240 SIVPVITLGSISKRWLVPGWRFGWLV 265
               ++   ++SK +   G R G+ V
Sbjct: 219 YPTKLVVSRTMSKAFDFAGGRLGYFV 244

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score = 75.7 bits (187), Expect = 3e-15
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 14/180 (7%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           R+ +AD+      Y+L  +++  T G  + +E++  VL     N ++  P +  Y   A 
Sbjct: 73  RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNAL 126

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
            +  EVR   L   ++ E DL+ +    D+ T  + I NP NP G    Y  L +I    
Sbjct: 127 IEGAEVREIPL--LQDGEHDLEGMLNAIDEKTTIVWICNPNNPTG---NYIELADIQAFL 181

Query: 210 RKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267
            ++   V+VV DE Y        P     L  +   +I   + SK + +   R G+ + +
Sbjct: 182 DRVPSDVLVVLDEAYIEYVTPQ-PEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD 240

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 74.9 bits (185), Expect = 5e-15
 Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 11/163 (6%)

Query: 63  EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122
                +   +     N Y   S     R  + + +        +  +V +  G  + + +
Sbjct: 47  ALRSELAARLGEVALNRYPVPSS-EALRAKLKEVMQVP-----AGMEVLLGNGSDEIISM 100

Query: 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV-EALADKNT 181
           +    ARPGA V+ P PG+  Y   AQ   +E     L    ++ +D  A+  A+A+   
Sbjct: 101 LALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQP 158

Query: 182 AAMVIINPGNPCGNVFTYHHLQEIAEMA--RKLRVMVVADEVY 222
           A + +  P NP GN+F    ++ I   A     R +VV DE Y
Sbjct: 159 AIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAY 201

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 15/137 (10%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
              +A +      +++ A  + +T G  + +   +   A   A +++P   +   E  A+
Sbjct: 57  GNKLAAH------HQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAK 110

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII--NPGNPCGNVFTYHHLQEIAE 207
              ++V    +L   NW  D++ ++A     +   ++   NP NP G   T      I  
Sbjct: 111 IAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTG---TITPADVIEP 165

Query: 208 MARKL--RVMVVADEVY 222
                    M + DE Y
Sbjct: 166 WIASKPANTMFIVDEAY 182

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score = 67.6 bits (166), Expect = 2e-12
 Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 18/184 (9%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           +  +A        YK+  +++ +  G  Q +E  +          L     +  YE  A+
Sbjct: 71  KSTLAQK------YKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAK 124

Query: 150 RKQVEVRHFDLLPERNWEV-DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
           +   +             + +   +          + +  P NP G         E  E 
Sbjct: 125 QCGAKCYK---TQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLG---ECLDASEATEF 178

Query: 209 ARKL--RVMVVADEVYGH---LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263
            + +    +VV D  Y              P  L      V+ LG+ SK + + G R G+
Sbjct: 179 IKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGY 238

Query: 264 LVTN 267
            + N
Sbjct: 239 GIAN 242

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score = 62.2 bits (152), Expect = 8e-11
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 23/177 (12%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI-LSVLARPGANVLLPRPGWPYYEGIA 148
            R +A++      +    D++ +  G     E              +   PG+  Y    
Sbjct: 57  MRKLAEH------FSCPEDNLMLVRG---IDECFDRISAEFSSMRFVTAWPGFDGYRARI 107

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
               +      L    +  +D +            +V+ NP NP G   +     E+ ++
Sbjct: 108 AVSGLRHFEIGLTD--DLLLDPND--LAQVSRDDCVVLANPSNPTGQALS---AGELDQL 160

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265
            ++   +++ DE Y    + S     +         +   S SK + + G R G L 
Sbjct: 161 RQRAGKLLI-DETYVD--YSSFRARGLAYGE---NELVFRSFSKSYGLAGLRLGALF 211

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 61.8 bits (151), Expect = 9e-11
 Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 15/133 (11%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
           R    +       Y      + +  G  + +  ++   A  G  +    P + YY  +A+
Sbjct: 71  REVAGEL------YGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAE 124

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
            +   VR F L        D                +  P  P G       L+ I E+A
Sbjct: 125 VQGARVRTFGL------TGDFRIAGFPERYEGKVFFLTTPNAPLG---PSFPLEYIDELA 175

Query: 210 RKLRVMVVADEVY 222
           R+   M+V DE Y
Sbjct: 176 RRCAGMLVLDETY 188

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 57.2 bits (139), Expect = 3e-09
 Identities = 34/165 (20%), Positives = 53/165 (32%), Gaps = 29/165 (17%)

Query: 63  EAEDAIVDAVRSGKFNCYATNSGIPPA-----RRAIADYLSRDLPYKLSADDVYVTLGCK 117
           +  D +   + S     Y        +        I  YL  D    LS ++V V  G  
Sbjct: 36  DLVDEVFRRLNSDALRIY------YDSPDEELIEKILSYLDTD---FLSKNNVSVGNG-- 84

Query: 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177
            A E+I  V+       +   P +  Y   A+    +     L    +  +    V    
Sbjct: 85  -ADEII-YVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVNVG--- 137

Query: 178 DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222
                 + I NP NP G+VF    ++ I +        V  DE Y
Sbjct: 138 --EGDVVFIPNPNNPTGHVFEREEIERILKTG----AFVALDEAY 176

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.8 bits (123), Expect = 3e-07
 Identities = 51/422 (12%), Positives = 105/422 (24%), Gaps = 142/422 (33%)

Query: 57  CFRTAVEA-EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115
            ++  +   EDA VD      F+C             + D   + +  K   D + ++  
Sbjct: 17  QYKDILSVFEDAFVD-----NFDCKD-----------VQDMP-KSILSKEEIDHIIMSKD 59

Query: 116 CKQAVEVILSVLARPGAN--------VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167
                  +   L              VL     +     +    + E R     P     
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF-----LMSPIKTEQRQ----PSMMTR 110

Query: 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM--VVADEVYGHL 225
           + ++  + L + N     +    N    V       ++ +   +LR    V+   + G  
Sbjct: 111 MYIEQRDRLYNDN----QVFAKYN----VSRLQPYLKLRQALLELRPAKNVL---IDG-- 157

Query: 226 TFGSIPYTPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIF-QKSGIIDSIK 283
                    +   G            K W+         +       IF       +S +
Sbjct: 158 ---------VLGSG------------KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196

Query: 284 DCL----SIYSDI-PTFIQGA-----IPQILEKTKE------------------------ 309
             L     +   I P +   +     I   +   +                         
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256

Query: 310 ------DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDD 363
                 +  CK++ T R       D +              + +++   +  L  D    
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVT--DFLSAA---------TTTHISLDHHSMTLTPDEVKS 305

Query: 364 IEFALKLA------KEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417
           +     L         E +   P          R++  AE  +++DGL     +   +  
Sbjct: 306 L-LLKYLDCRPQDLPREVLTTNP---------RRLSIIAE--SIRDGLATWDNWKHVNCD 353

Query: 418 KH 419
           K 
Sbjct: 354 KL 355

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula} Length = 418

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 38/192 (19%), Positives = 57/192 (29%), Gaps = 29/192 (15%)

Query: 38  KNDPRP-VVPLG---Y----GDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA 89
           K + R  VV           G+       +   E   ++ D+    +   YA  +GIP  
Sbjct: 33  KENGRENVVNGTLGAIHDEEGNLVFLKTVK---EEYLSLSDS----EHVGYAPIAGIPDF 85

Query: 90  RRAIADYLSRDLPYKLSADDVYV----TLGCKQAVEVILSVLARPGANVLLPRPGWPYYE 145
             A          +     + ++    T G    +  ++     PG  VL     W  Y 
Sbjct: 86  LCAAEK-----ECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYR 140

Query: 146 GIAQRKQVEVRHFDLLPERNWEVDLD---AVEALADKNTAAMVIINPG--NPCGNVFTYH 200
            I       +  + L  E N          V  LA K T  +VI N    NP G      
Sbjct: 141 VICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDK 200

Query: 201 HLQEIAEMARKL 212
               I    + L
Sbjct: 201 DWDSILNFLKDL 212

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus} Length = 412

 Score = 43.7 bits (104), Expect = 7e-05
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 13/77 (16%)

Query: 161 LPERNWEV-----DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215
           L      V     + +AV       T A+ +    NP   V     L+ +A +A +  V 
Sbjct: 116 LSLMGVTVRYVDPEPEAVREALSAKTRAVFVETVANPALLVP---DLEALATLAEEAGVA 172

Query: 216 VVADEVYGHLTFGSIPY 232
           +V D      TFG+   
Sbjct: 173 LVVDN-----TFGAAGA 184

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Length = 371

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 19/147 (12%), Positives = 49/147 (33%), Gaps = 30/147 (20%)

Query: 89  ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR-------PGW 141
               +  +L          D   VT G ++A   ++  LA+  A V++            
Sbjct: 59  IHNQLPKFLG--------CDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAA 110

Query: 142 PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT----AAMVIIN-PGNPCGNV 196
                  +R  + +         ++ +  +      ++        + +I  P    GN+
Sbjct: 111 -------ERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNL 163

Query: 197 FTYHHLQEIAEMARKLRVMVVADEVYG 223
                +++IA++  +  V ++ +  Y 
Sbjct: 164 ---PDVKKIAKVCSEYDVPLLVNGAYA 187

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A* Length = 415

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 23/117 (19%)

Query: 122 VILSVLARPGANVLLP----RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177
            IL+ +   G +VL+      P   +   I  +  V    FD L           +    
Sbjct: 113 SILAFI-EQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-------IGADIVKHL 164

Query: 178 DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVVADEVYGHLTFGSIPY 232
             NT  + + +PG+        H +  I    R +    +++ D      T+ +   
Sbjct: 165 QPNTKIVFLESPGSI---TMEVHDVPAIVAAVRSVVPDAIIMIDN-----TWAA-GV 212

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A* Length = 374

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 21/131 (16%)

Query: 119 AVEVILSVLARPGANVLLPR-PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177
           A+   +  L        LP  PG P  E   +   V  ++F+          +  +    
Sbjct: 88  AILATILALKPKKVIHYLPELPGHPSIERSCKI--VNAKYFES-------DKVGEILNKI 138

Query: 178 DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237
           DK+T  ++  +  +    V    + +++   A+    +V  D        G      + L
Sbjct: 139 DKDTLVIITGSTMDL--KVIELENFKKVINTAKNKEAIVFVD-----DASG----ARVRL 187

Query: 238 FGSIVPVITLG 248
             +  P + LG
Sbjct: 188 LFNQPPALKLG 198

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	419
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	100.0
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	100.0
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	100.0
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	100.0
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	100.0
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
1iug_A	352	Putative aspartate aminotransferase; wild type, py	100.0
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	100.0
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	100.0
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	100.0
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	100.0
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	100.0
1svv_A	359	Threonine aldolase; structural genomics, structura	100.0
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	100.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	100.0
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	100.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	100.0
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	100.0
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	100.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	100.0
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	100.0
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	100.0
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.98
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.98
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.98
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.98
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.98
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.98
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.98
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.98
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.97
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.97
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.97
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.97
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.97
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.97
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.97
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.97
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.97
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.97
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.97
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.97
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.97
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.97
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.97
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.97
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.97
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.97
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.97
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.97
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.97
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.97
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.97
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.97
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.97
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.97
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.97
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.96
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.96
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.96
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.96
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.96
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.96
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.96
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.96
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.96
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.96
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.96
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.96
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.96
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.96
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.96
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.96
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.96
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.96
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.96
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.96
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.96
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.96
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.96
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.96
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.96
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.96
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.96
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.95
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.95
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.95
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.95
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.95
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.95
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.95
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.95
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.94
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.94
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.94
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.94
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.94
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.94
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.93
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.93
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.93
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.88
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.93
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.93
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.92
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.91
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.91
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.9
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.9
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.9
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.9
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.9
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.89
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.89
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.85
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.84
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.82
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.82
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.76
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.75
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.74
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.69
3gh5_A	525	HEX1, beta-hexosaminidase; beta-N-acetylhexosamini	84.68
1oft_A	161	SULA, hypothetical protein PA3008; bacterial cell	83.93
1ofu_X	119	SULA, hypothetical protein PA3008; bacterial cell	82.23

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=6.3e-55  Score=419.52  Aligned_cols=406  Identities=34%  Similarity=0.677  Sum_probs=332.9

Q ss_pred             cccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCC
Q 014769            6 ENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSG   85 (419)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g   85 (419)
                      .+.|+... +.+.+...+.|+.+++.+...  .+.++++|+|+.|+|...+.+++++.+++++.+.+.......|+++.|
T Consensus        21 ~~~w~~~~-~~~~~~~~~~i~~~~~~~~~~--~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g   97 (427)
T 3dyd_A           21 QSMWSVRP-SDMAKKTFNPIRAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIG   97 (427)
T ss_dssp             ---CCCCC-CC----------------CCC--CCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTC
T ss_pred             ccccCcch-hhHhhcccchHHHHHHHHhhc--ccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCC
Confidence            45798554 446666677799988765432  344678899999998765567889999999999988766678998899


Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN  165 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  165 (419)
                      ..++|+++++++.+. +..+++++|++|+|+++++..++.+++++||+|++++|+|.++...++..|.+++.++++++.+
T Consensus        98 ~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  176 (427)
T 3dyd_A           98 FLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKS  176 (427)
T ss_dssp             CHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGT
T ss_pred             cHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccC
Confidence            999999999999765 6668889999999999999999999999999999999999999999999999999999877677


Q ss_pred             cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      +.+|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++..+.++..++.+.+++
T Consensus       177 ~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi  256 (427)
T 3dyd_A          177 WEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPIL  256 (427)
T ss_dssp             TEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEE
T ss_pred             CCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEE
Confidence            88999999999988889999999999999999999999999999999999999999999998887776777777777789


Q ss_pred             EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769          246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI  325 (419)
Q Consensus       246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  325 (419)
                      +++|+||.|+++|+|+||++++++..... +++++.+......+++++++.|.++..+|+....+++++++++++++++.
T Consensus       257 ~~~S~sK~~~~~G~riG~~~~~~~~~~~~-~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~  335 (427)
T 3dyd_A          257 SCGGLAKRWLVPGWRLGWILIHDRRDIFG-NEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADL  335 (427)
T ss_dssp             EEEESTTTSSCGGGCCEEEEEECSTTSSH-HHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             EEeeccccCCCcCcceEEEEecCcchhhH-HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999986432221 24666666554335788999999999999865568889999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHH
Q 014769          326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGL  405 (419)
Q Consensus       326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l  405 (419)
                      +.+.|+++|++. +..|++|+|+|+.++....+...+..+++.+|++++||.+.||..|+.++++||+++.++++|++++
T Consensus       336 l~~~L~~~~g~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l  414 (427)
T 3dyd_A          336 CYGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEAC  414 (427)
T ss_dssp             HHHHHHHSTTEE-EECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHH
T ss_pred             HHHHHhcCCCce-ecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHH
Confidence            999999988887 4479999999998874332222357788888888899999999999889999999999999999999


Q ss_pred             HHHHHHHHHHhc
Q 014769          406 GRMKAFCQRHTK  417 (419)
Q Consensus       406 ~~l~~~~~~~~~  417 (419)
                      ++|+++++++.+
T Consensus       415 ~~l~~~l~~~~~  426 (427)
T 3dyd_A          415 SRIQEFCEQHYH  426 (427)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHhhc
Confidence            999999998763

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=2.3e-51  Score=389.62  Aligned_cols=377  Identities=23%  Similarity=0.391  Sum_probs=317.1

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA   92 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   92 (419)
                      .+++....+.+.++.+.....+ ... .++++|+|+.|+|.    +++++.+.+++.+.+.... ..|++..|..++|++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~   76 (385)
T 1b5p_A            4 LSRRVQAMKPSATVAVNAKALE-LRR-QGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPELREA   76 (385)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHH-HHH-TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred             hhhHHhhcCcchHHHHHHHHHH-HHh-cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence            3455666777778777764433 222 36789999999863    4567889999988886543 479888899999999


Q ss_pred             HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      +++++.+.+|..+++++|++|+|++++++.++.+++++||+|++++|+|..+...++..|.+++.+++++++++.+|++.
T Consensus        77 ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  156 (385)
T 1b5p_A           77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPER  156 (385)
T ss_dssp             HHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred             HHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence            99999998888889999999999999999999999999999999999999999999999999999998764567899999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      ++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+.. +++++++||||
T Consensus       157 l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK  234 (385)
T 1b5p_A          157 VRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAK  234 (385)
T ss_dssp             HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTT
T ss_pred             HHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechh
Confidence            999998888999999999999999999999999999999999999999999998876 4445555544 67999999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHccc--chHHHHHHHHHHHHHHHHHHHH
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKT--KEDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      .++++|+|+||+++++        ++++.+..... .+.+++.+.|.++.++++..  ..+++++.+++++++++.+.+.
T Consensus       235 ~~~~~G~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~  306 (385)
T 1b5p_A          235 AFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEG  306 (385)
T ss_dssp             TTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCcccceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999864        57777776543 34577888999988888641  1467888899999999999999


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      |+++ ++. +..|++++|+|+.++..   + .+..++...|+ ++||.+.||..|+.++++||+++.++++|++++++|+
T Consensus       307 L~~~-g~~-~~~~~~~~~~~~~~~~~---~-~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~  379 (385)
T 1b5p_A          307 LTAL-GLK-AVRPSGAFYVLMDTSPI---A-PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFA  379 (385)
T ss_dssp             HHHH-TCC-BCCCSBTTEEEEECTTT---C-SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGG
T ss_pred             HHHC-CCe-ecCCCeeEEEEEecCCC---C-CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHH
Confidence            9987 777 45788999999988631   1 25678888886 7899999999998788999999989999999999998


Q ss_pred             HHHH
Q 014769          410 AFCQ  413 (419)
Q Consensus       410 ~~~~  413 (419)
                      ++++
T Consensus       380 ~~l~  383 (385)
T 1b5p_A          380 RVLG  383 (385)
T ss_dssp             GGC-
T ss_pred             HHHh
Confidence            7764

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=4.7e-51  Score=391.63  Aligned_cols=403  Identities=29%  Similarity=0.554  Sum_probs=328.3

Q ss_pred             cccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCH
Q 014769            8 KWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP   87 (419)
Q Consensus         8 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~   87 (419)
                      .|+...+. ..+.....++.+..... ..  ..+.++|+|+.|+|..++.+++++.+.+++.+.+.......|++..|..
T Consensus         3 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~   78 (416)
T 1bw0_A            3 SWDVSMSN-HAGLVFNPIRTVSDNAK-PS--PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP   78 (416)
T ss_dssp             -CCCCCCH-HHHTCCCHHHHHHHTCC-CC--CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCH
T ss_pred             ccccCchh-hhhccccHHHHHHHHHH-Hh--hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCH
Confidence            48886554 55565666777665321 11  1236799999999865445788999999999998766556898888999


Q ss_pred             HHHHHHHHHHHh------hCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769           88 PARRAIADYLSR------DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL  161 (419)
Q Consensus        88 ~lr~~ia~~l~~------~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~  161 (419)
                      ++|+++++++.+      ..|..+++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.++++
T Consensus        79 ~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~  158 (416)
T 1bw0_A           79 EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCR  158 (416)
T ss_dssp             HHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEE
T ss_pred             HHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecC
Confidence            999999999982      25666788999999999999999999999999999999999999999999999999999886


Q ss_pred             CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC----CCCCccc
Q 014769          162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI----PYTPMGL  237 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~----~~~~~~~  237 (419)
                      ++.++.+|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++.    ...++..
T Consensus       159 ~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~  238 (416)
T 1bw0_A          159 PENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD  238 (416)
T ss_dssp             GGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTS
T ss_pred             cccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHH
Confidence            655678999999999988888999999999999999999999999999999999999999999888765    4455555


Q ss_pred             cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                      ++...++++++|+||.|+++|+|+||++++++..+..  .+...++.....+++++++.|.++..+|+....+++++.++
T Consensus       239 ~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  316 (416)
T 1bw0_A          239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGP--SFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVA  316 (416)
T ss_dssp             SCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCH--HHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred             ccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHH--HHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHH
Confidence            5555578999999999999999999999976411221  23334433322346788999999999998644678889999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE  397 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~  397 (419)
                      +++++++.+.+.|+++|++. +..|.+|+|+|++++........+..+++.++++++||.+.||..|+.++++||+++.+
T Consensus       317 ~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~  395 (416)
T 1bw0_A          317 KIEESAMYLYNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRP  395 (416)
T ss_dssp             HHHHHHHHHHHHHTTSTTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSC
T ss_pred             HHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCC
Confidence            99999999999999888887 44688899999988643211112567788888778899999999998889999999988


Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q 014769          398 PSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~~~~~~  417 (419)
                      ++++++++++|.++++++.+
T Consensus       396 ~e~l~~~l~~l~~~l~~~~~  415 (416)
T 1bw0_A          396 VEVYREAVERIKAFCQRHAA  415 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHBC
T ss_pred             HHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999988765

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=4.6e-50  Score=387.26  Aligned_cols=383  Identities=21%  Similarity=0.290  Sum_probs=322.4

Q ss_pred             cccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCC
Q 014769            6 ENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATN   83 (419)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~   83 (419)
                      ..+|+..++++.+..+.+.++.+.... .      ++++|+|+.|.|..  .+.+++.+.+++.+.+...  ...+|+++
T Consensus        47 ~~~~~~~~s~~~~~~~~s~~~~~~~~~-~------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~  117 (448)
T 3aow_A           47 LGDVERFFSKKALEMRASEVRELLKLV-E------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTT  117 (448)
T ss_dssp             TSCGGGGCCHHHHHCCCCHHHHHHHHH-H------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCT
T ss_pred             ccchHHHhhHHHhcCCCcHHHHHHHhc-c------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCC
Confidence            466998889888888888888887632 1      46799999998763  2346788999988887653  13479988


Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE  163 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~  163 (419)
                      .|..++|++|++++.+.+|.. ++++|++|+|+++++..++++++++||+|+++.|+|+++...++..|.+++.++++++
T Consensus       118 ~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~  196 (448)
T 3aow_A          118 KGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE  196 (448)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred             CCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC
Confidence            999999999999997777766 7899999999999999999999999999999999999999999999999999988642


Q ss_pred             CCcccChHHHHHhhc----C--CccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769          164 RNWEVDLDAVEALAD----K--NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG  236 (419)
Q Consensus       164 ~~~~~~~~~l~~~~~----~--~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  236 (419)
                         ++|++.|+++++    +  ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++.
T Consensus       197 ---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~  273 (448)
T 3aow_A          197 ---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIK  273 (448)
T ss_dssp             ---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTG
T ss_pred             ---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence               489999999887    5  67777 4679999999999999999999999999999999999999998876666676


Q ss_pred             ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHH
Q 014769          237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCK  314 (419)
Q Consensus       237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~  314 (419)
                      .++..+++++++||||.++ +|+|+||+++++        ++++.+..... .+.+++.+.|.++..+|+... .+++++
T Consensus       274 ~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~  344 (448)
T 3aow_A          274 ALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--------GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPE  344 (448)
T ss_dssp             GGCTTSCEEEEEESTTTTC-GGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred             hcCCCCCEEEEccchhhcc-ccccEEEEEeCH--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHH
Confidence            6766678999999999987 999999999975        57777776543 345678999999999998642 467888


Q ss_pred             HHHHHHHHHHHHHHHhhc-CC-CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CC
Q 014769          315 LIDTLRESAEICYDGVKE-IP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KN  388 (419)
Q Consensus       315 ~~~~~~~~~~~l~~~l~~-~~-~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~  388 (419)
                      .++.++++++.+.+.|++ +| ++. +..|.+|+|+|++++..     .+..+++.+++++ ||.+.||..|+.    .+
T Consensus       345 ~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~~~v~~~~~-----~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~  417 (448)
T 3aow_A          345 IRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMFIWVTLPDG-----IDSKKMLERAIKK-GVAYVPGEAFYAHRDVKN  417 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHHT-TEECEEGGGGSTTCCCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CcEEEcchhhcCCCCCCC
Confidence            899999999999999987 67 577 44788999999999742     2567888888665 999999998853    57


Q ss_pred             eEEEEeec-CHHHHHHHHHHHHHHHHHHhc
Q 014769          389 WLRIAFCA-EPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       389 ~~Ris~~~-~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      ++||+++. ++++|++++++|.+++++..+
T Consensus       418 ~iRls~~~~~~e~i~~~~~~L~~~l~~~~~  447 (448)
T 3aow_A          418 TMRLNFTYVDEDKIMEGIKRLAETIKEELK  447 (448)
T ss_dssp             EEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999975 789999999999999988765

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=4.5e-49  Score=374.41  Aligned_cols=381  Identities=21%  Similarity=0.368  Sum_probs=318.2

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +++....+.+.+..+.....+ .. ..++++|+|+.|.|.    ++.++.+.+++.+.+... ...|++..|..++|+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~l   76 (388)
T 1j32_A            4 AARVESVSPSMTLIIDAKAKA-MK-AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAI   76 (388)
T ss_dssp             CHHHHTSCCCSSTTTHHHHHH-HH-TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred             hhHhHhCCccHHHHHHHHHHH-HH-hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHH
Confidence            345555666666666653333 22 247889999999863    456789999999888654 34799888999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++++++.++.+|++.|
T Consensus        77 a~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l  156 (388)
T 1j32_A           77 AQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQI  156 (388)
T ss_dssp             HHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHH
T ss_pred             HHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHH
Confidence            99999888877888999999999999999999999999999999999999999999999999999886545678999999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCC
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSIS  251 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~s  251 (419)
                      +++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+..  .++++++.|+|
T Consensus       157 ~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s  236 (388)
T 1j32_A          157 RQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA  236 (388)
T ss_dssp             HHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred             HHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeech
Confidence            9999888889999999999999999999999999999999999999999999887765555555543  34689999999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      |.++++|+|+||+++++        ++++.++.... .+++++.+.|.++..+|+.. .+++++.+++++++++.+.+.|
T Consensus       237 K~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L  307 (388)
T 1j32_A          237 KTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDAL  307 (388)
T ss_dssp             TTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHH
Confidence            99988999999999865        57777766543 34667888888888888743 4678889999999999999999


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                      +++|++. +..|.+++++|+.++...    .+..++...|++++||.+.||..|+.++++|++++.+++++++++++|++
T Consensus       308 ~~~~g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~~  382 (388)
T 1j32_A          308 NAMPGLE-CPKPDGAFYMFPSIAKTG----RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEK  382 (388)
T ss_dssp             HTCTTCB-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHH
T ss_pred             hhCCCCc-ccCCCeeEEEEEecCCCC----CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHHH
Confidence            9988888 447888999998875311    25678888887768999999998887899999999899999999999999


Q ss_pred             HHHHH
Q 014769          411 FCQRH  415 (419)
Q Consensus       411 ~~~~~  415 (419)
                      +++++
T Consensus       383 ~l~~~  387 (388)
T 1j32_A          383 FLHGI  387 (388)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98765

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=3.5e-49  Score=375.56  Aligned_cols=374  Identities=19%  Similarity=0.334  Sum_probs=305.9

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY   96 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   96 (419)
                      .....+..++.+.... ..+. .+++++|||+.|++.    +++++.+.+++.+.+.... ..|+++.|..++|++++++
T Consensus         8 ~~~~~~~~~~~~~~~~-~~~~-~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~   80 (391)
T 3h14_A            8 RSAVDPFIVMDVMEAA-RRAE-EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQRIARL   80 (391)
T ss_dssp             TTCCCCCTTHHHHHHH-HHHH-HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHHHHHHH
T ss_pred             HhhcCcchHHHHHHHH-HHHH-hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHHH
Confidence            4455566667766533 3332 348899999999854    5668899999999886543 4899888999999999999


Q ss_pred             HHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769           97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL  176 (419)
Q Consensus        97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  176 (419)
                      +.+.+|..+++++|++|+|++++++.++.+++++||+|++++|+|.++...++..|.+++.+++++++++.+|++.++++
T Consensus        81 ~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~  160 (391)
T 3h14_A           81 YGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL  160 (391)
T ss_dssp             HHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS
T ss_pred             HHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc
Confidence            99888888899999999999999999999999999999999999999999999999999999987766778899999876


Q ss_pred             hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC
Q 014769          177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV  256 (419)
Q Consensus       177 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  256 (419)
                         ++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++... ++..+  .+++++++|+||.+++
T Consensus       161 ---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~  234 (391)
T 3h14_A          161 ---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFSKYFSM  234 (391)
T ss_dssp             ---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESSSTTCC
T ss_pred             ---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEechhccCC
Confidence               68899999999999999999999999999999999999999999998876532 32233  3568999999999988


Q ss_pred             CCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      +|+|+||+++++        ++++.+..... .+++++.+.+.++.++++  ..+++++.+++++++++.+.+.|+++ +
T Consensus       235 ~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~-~  303 (391)
T 3h14_A          235 TGWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKA-G  303 (391)
T ss_dssp             TTSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             ccceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence            999999999865        46677766543 356778889988888887  36888999999999999999999987 4


Q ss_pred             CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      +..+..|.+++++|+.++...    .+..++..++++++||.+.||..|+.   .+++|++++.+++++++++++|++++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~  379 (391)
T 3h14_A          304 FTRIAPPDGAFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFM  379 (391)
T ss_dssp             CCCBCCCCBTTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCeeEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            443447888899999887421    25778888888878999999999976   67999999888999999999999999


Q ss_pred             HHHhcc
Q 014769          413 QRHTKK  418 (419)
Q Consensus       413 ~~~~~~  418 (419)
                      +++...
T Consensus       380 ~~~~~~  385 (391)
T 3h14_A          380 QARGEG  385 (391)
T ss_dssp             HHC---
T ss_pred             HHhccc
Confidence            887653

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=1.2e-49  Score=382.54  Aligned_cols=382  Identities=20%  Similarity=0.363  Sum_probs=322.7

Q ss_pred             ccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-CCCCCCCCCCHHH
Q 014769           11 FEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-FNCYATNSGIPPA   89 (419)
Q Consensus        11 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~l   89 (419)
                      ...++++...+++.++.+... ..      +.++|+|+.|+|.    +++++.+.+++.+.+.... ...|+++.|..++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~-~~------~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~l   72 (422)
T 3fvs_A            4 QLQARRLDGIDYNPWVEFVKL-AS------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPL   72 (422)
T ss_dssp             CCSCGGGTTCCCCHHHHHHHH-HH------TSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHH
T ss_pred             hhHHHHhhccCccHHHHHHHH-hh------cCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHH
Confidence            345566677777778777652 22      5689999999863    5678999999999987654 4589988899999


Q ss_pred             HHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC------
Q 014769           90 RRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP------  162 (419)
Q Consensus        90 r~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~------  162 (419)
                      |+++++++.+.+|..+++ ++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|.+++.+++++      
T Consensus        73 r~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G  152 (422)
T 3fvs_A           73 TKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNG  152 (422)
T ss_dssp             HHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSS
T ss_pred             HHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccc
Confidence            999999999888888888 7999999999999999999999999999999999999999999999999999875      


Q ss_pred             ----CCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          163 ----ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       163 ----~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                          ..++.+|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+
T Consensus       153 ~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  232 (422)
T 3fvs_A          153 ELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASL  232 (422)
T ss_dssp             SCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred             ccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhc
Confidence                2356789999999998889999999999999999999999999999999999999999999999887666666555


Q ss_pred             CC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc------cchH
Q 014769          239 GS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK------TKED  310 (419)
Q Consensus       239 ~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~------~~~~  310 (419)
                      .. .++++++.|+||.++++|+|+||+++++        ++++.+..... ..++++++.|.++..+++.      ...+
T Consensus       233 ~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  304 (422)
T 3fvs_A          233 PGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSS  304 (422)
T ss_dssp             TTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTC
T ss_pred             ccccCcEEEEecchhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHH
Confidence            43 3678999999999999999999999865        57777766543 3567788999999888874      1246


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCC---------HHHHHHHHHHhcCeEeecC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIND---------DIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gv~v~~g  381 (419)
                      ++++.+++++++++.+.+.|+++ ++. +..|++|+|+|+.++..... ..+         +.+++..+++++||.+.||
T Consensus       305 ~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  381 (422)
T 3fvs_A          305 YFVQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQGSYFLITDISDFKRK-MPDLPGAVDEPYDRRFVKWMIKNKGLVAIPV  381 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECHHHHHH-CCCCCCCTTCCHHHHHHHHHHHHHCEECEEG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeeEEEEechhhccc-ccccccccccccHHHHHHHHHHhcCEEEeCc
Confidence            78889999999999999999998 777 44789999999988642110 001         5578888888899999999


Q ss_pred             CCCCC-------CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          382 IYVGL-------KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       382 ~~~~~-------~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      +.|+.       .+++||+++.++++|++++++|++++++
T Consensus       382 ~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          382 SIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             GGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred             HHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence            98853       6899999988999999999999998864

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=5.3e-49  Score=384.68  Aligned_cols=388  Identities=18%  Similarity=0.293  Sum_probs=312.0

Q ss_pred             HHHHHHHHHHhhhcCCCC----CeeeccCCCCCCCCCCC-------------------------ChHHHHHHHHHHHhCC
Q 014769           25 VKTSLASIIDSVNKNDPR----PVVPLGYGDPTAFPCFR-------------------------TAVEAEDAIVDAVRSG   75 (419)
Q Consensus        25 i~~~~~~~~~~~~~~~~~----~~i~l~~g~~~~~~~~~-------------------------~~~~v~~a~~~~~~~~   75 (419)
                      |...++++.+++.+..+.    ++|+.++|+|...+..|                         .++.+.++..+.+...
T Consensus        43 ~~~~a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~  122 (500)
T 3tcm_A           43 IVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMI  122 (500)
T ss_dssp             HHHHHHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcC
Confidence            444455555555554455    89999999985443321                         3444556566666652


Q ss_pred             ---CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCCCeEEeeCCCCCCcHHHHhhc
Q 014769           76 ---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWPYYEGIAQRK  151 (419)
Q Consensus        76 ---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~~  151 (419)
                         ....|+++.|..++|+++++++.+.+|..+++++|++|+|+++++..++.+++ ++||+|+++.|+|+.+...+...
T Consensus       123 ~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~  202 (500)
T 3tcm_A          123 PGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALH  202 (500)
T ss_dssp             TTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHT
T ss_pred             CCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHc
Confidence               45689999999999999999999888888999999999999999999999998 79999999999999999999999


Q ss_pred             CCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc
Q 014769          152 QVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL  225 (419)
Q Consensus       152 g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~  225 (419)
                      |.+++.++++++.+|.+|++.|++++++      +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+
T Consensus       203 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~  282 (500)
T 3tcm_A          203 GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQEN  282 (500)
T ss_dssp             TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred             CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcccc
Confidence            9999999998887899999999998876      6788999999999999999999999999999999999999999999


Q ss_pred             ccCCC-CCCCcc----cc---CCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHH
Q 014769          226 TFGSI-PYTPMG----LF---GSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFI  296 (419)
Q Consensus       226 ~~~~~-~~~~~~----~~---~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  296 (419)
                      .|++. ...++.    .+   ....++++++||||.| +++|+|+||+++....     +++++.+........+++.+.
T Consensus       283 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~  357 (500)
T 3tcm_A          283 IYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITG  357 (500)
T ss_dssp             BCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHH
T ss_pred             ccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHH
Confidence            88643 344432    12   2334689999999998 8899999999983210     157777777665567789999


Q ss_pred             HHHHHHHHccc---------chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC--ccc-----ccCC
Q 014769          297 QGAIPQILEKT---------KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN--PWL-----LEDI  360 (419)
Q Consensus       297 ~~a~~~~l~~~---------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~--~~~-----~~~~  360 (419)
                      |.++..++...         ..++..+.+++++++++.+.+.|+++|++.+ ..|++|+|+|+++.  ...     ..+.
T Consensus       358 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~~~g~~~~~~~~~lp~~~~~~~~~~g~  436 (500)
T 3tcm_A          358 QILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC-NEAEGAMYVFPQICLPQKAIEAAKAANK  436 (500)
T ss_dssp             HHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC-CCCCBTTEECCEECCCHHHHHHHHHHTS
T ss_pred             HHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-ecCCeEEEEeeeecCchhhHHHHHhcCC
Confidence            99999888631         1245667788899999999999999889884 48999999996553  210     0112


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      .++..++.++++++||.+.||+.|+.   ..+||++++.+++++++++++|+++++++.++
T Consensus       437 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~~  497 (500)
T 3tcm_A          437 APDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSE  497 (500)
T ss_dssp             CHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence            22445567888899999999999985   45899999988899999999999999887654

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=1.2e-48  Score=372.68  Aligned_cols=379  Identities=20%  Similarity=0.363  Sum_probs=307.4

Q ss_pred             chhhhhC--CchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC---CCCCCCCCCCHH
Q 014769           14 KQEHKAA--PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK---FNCYATNSGIPP   88 (419)
Q Consensus        14 ~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~Y~~~~g~~~   88 (419)
                      +++....  .++.++.+.....+...+..++++|||+.|+|.    +++++.+.+++.+.+....   ...|++..|..+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~   80 (398)
T 3ele_A            5 NESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVE   80 (398)
T ss_dssp             CHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHH
T ss_pred             hHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHH
Confidence            3444443  567778776644332222246789999999754    5678999999999887642   457988899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769           89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE  167 (419)
Q Consensus        89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  167 (419)
                      +|+++++++.+.+|.++++++|++|+|+++++..++++++++| |+|++++|+|.++...++..|.+++.+++++ +++.
T Consensus        81 lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~  159 (398)
T 3ele_A           81 TRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHFQ  159 (398)
T ss_dssp             HHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTSS
T ss_pred             HHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCCc
Confidence            9999999999988988899999999999999999999999999 9999999999999999999999999999864 3678


Q ss_pred             cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh------CCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK------LRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                      +|++.++++++++++++++++|+||||.++|.+++++|+++|++      +|+++|+||+|+.+.+++...+...  ...
T Consensus       160 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~  237 (398)
T 3ele_A          160 IDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT--KYY  237 (398)
T ss_dssp             CCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG--GTC
T ss_pred             CCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH--hhc
Confidence            99999999998889999999999999999999999999999999      9999999999999988765443332  233


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL  319 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  319 (419)
                      +++++++|+||.++++|+|+||++++++  +.....+...+.....  .+.+++.+.|.++..+++...      .++++
T Consensus       238 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~  309 (398)
T 3ele_A          238 DNTLVCYSYSKSLSLPGERIGYVLVPDE--VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG------DINAY  309 (398)
T ss_dssp             SSEEEEEESTTTSSCTTTCCEEEECCTT--STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC------CHHHH
T ss_pred             CCeEEEEehhhcCCCccceeEEEEEcch--hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH------HHHHH
Confidence            5789999999999889999999998753  2211124444443322  135667788888877776532      35677


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHH
Q 014769          320 RESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPS  399 (419)
Q Consensus       320 ~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~  399 (419)
                      +++++.+.+.|+++ ++. +..|.+++++|++++..      +..++...+ .++||.+.||..|+.++++||+++.+++
T Consensus       310 ~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~------~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~~~~e  380 (398)
T 3ele_A          310 KENRDLLYEGLTRI-GYH-CFKPDGAFYMFVKALED------DSNAFCEKA-KEEDVLIVAADGFGCPGWVRISYCVDRE  380 (398)
T ss_dssp             HHHHHHHHHHHHHH-TCC-EECCSBSSEEEEECSSS------CHHHHHHHH-HTTTEECEESGGGTCTTEEEEECCSCHH
T ss_pred             HHHHHHHHHHHHHc-CCe-ecCCCeeEEEEEEcCCC------CHHHHHHHH-HHCCEEEeCccccCCCCeEEEEecCCHH
Confidence            88888888888877 777 44788999999998742      466777655 7789999999999888999999998999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 014769          400 ALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~~~  416 (419)
                      +|++++++|++++++++
T Consensus       381 ~i~~~l~~l~~~l~~~~  397 (398)
T 3ele_A          381 MIKHSMPAFEKIYKKYN  397 (398)
T ss_dssp             HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998875

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.4e-48  Score=372.28  Aligned_cols=380  Identities=20%  Similarity=0.320  Sum_probs=304.0

Q ss_pred             hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769           18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL   97 (419)
Q Consensus        18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l   97 (419)
                      ...+...+..+.. ..+.+. ..|+++|||+.|.+.    ++.++.+.+++.+++.......|++..|..++|+++++++
T Consensus        15 ~~~~~~~~~~~~~-~~~~~~-~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~   88 (412)
T 2x5d_A           15 DRLPPYVFNITAE-LKMAAR-RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWY   88 (412)
T ss_dssp             ------CHHHHHH-HHHHHH-HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHH
T ss_pred             hhcCchHHHHHHH-HHHHHh-hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHH
Confidence            3334444555443 223232 347889999999863    4567899999988876543457988889999999999999


Q ss_pred             HhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769           98 SRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL  176 (419)
Q Consensus        98 ~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  176 (419)
                      .+.+|..+++ ++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.++++++.++.+|++.++++
T Consensus        89 ~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~  168 (412)
T 2x5d_A           89 RDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRE  168 (412)
T ss_dssp             HHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHT
T ss_pred             HHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHh
Confidence            8877877788 799999999999999999999999999999999999999999999999999987554666889999999


Q ss_pred             hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCC
Q 014769          177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWL  255 (419)
Q Consensus       177 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~  255 (419)
                      +++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++
T Consensus       169 i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~  248 (412)
T 2x5d_A          169 SIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYN  248 (412)
T ss_dssp             EESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCS
T ss_pred             cccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccC
Confidence            9888899999999999999999999999999999999999999999999887655445555533 457899999999998


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                      ++|+|+||+++++        ++++.+..... .+++++.+.|.++..+|+.. .+++++.+++++++++.+.+.|+++ 
T Consensus       249 ~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-  318 (412)
T 2x5d_A          249 MAGWRIGFMVGNP--------ELVSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREA-  318 (412)
T ss_dssp             CTTSCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CcccceEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence            8999999999864        57777776543 35678899999999998754 4678889999999999999999987 


Q ss_pred             CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      ++. +..|.+|+|+|++++... . ..+..++...|++++||.+.||..|+.  .+++||+++.+++++++++++|++++
T Consensus       319 g~~-~~~~~~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l  395 (412)
T 2x5d_A          319 GWM-VENPKASMYVWAKIPEPY-A-HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMF  395 (412)
T ss_dssp             TCC-CCCCSBSSEEEEECCTTT-G-GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CCE-ecCCCeeeEEEEEcCCcc-C-CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence            777 447788999999986310 0 014677888887778999999998863  68999999889999999999999999


Q ss_pred             HHHh
Q 014769          413 QRHT  416 (419)
Q Consensus       413 ~~~~  416 (419)
                      +++.
T Consensus       396 ~~~~  399 (412)
T 2x5d_A          396 RADG  399 (412)
T ss_dssp             HHTT
T ss_pred             HhcC
Confidence            8753

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=1.3e-48  Score=372.14  Aligned_cols=370  Identities=21%  Similarity=0.329  Sum_probs=309.5

Q ss_pred             hhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769           16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD   95 (419)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   95 (419)
                      +....++..+..+.. ..+.+...+++++|||+.|++.    ++.++.+.+++.+.+.  ....|+++.|..++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~-~~~~~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~   77 (396)
T 3jtx_A            5 LLKQLKPYPFARLHE-AMQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELRQACAN   77 (396)
T ss_dssp             HHHHCCSCHHHHHHH-HTTTCCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHHH
T ss_pred             hhccCCCChHHHHHH-HHHhhhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHHH
Confidence            344555566666543 4454544568999999999853    5678999999998875  34589998899999999999


Q ss_pred             HHHhhCCCC-CCCC-cEEEcccHHHHHHHHHHHhcCCC-----CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc
Q 014769           96 YLSRDLPYK-LSAD-DVYVTLGCKQAVEVILSVLARPG-----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV  168 (419)
Q Consensus        96 ~l~~~~~~~-~~~~-~i~~t~g~~~al~~~~~~l~~~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  168 (419)
                      ++.+.+|.. ++++ +|++|+|+++++..++++++++|     |+|+++.|+|.++...++..|.+++.+++ .++++.+
T Consensus        78 ~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~  156 (396)
T 3jtx_A           78 WLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNP  156 (396)
T ss_dssp             HHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCC
T ss_pred             HHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCcc
Confidence            999988877 7888 99999999999999999999997     79999999999999999999999999998 4556788


Q ss_pred             ChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc----cC-CCCc
Q 014769          169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL----FG-SIVP  243 (419)
Q Consensus       169 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~----~~-~~~~  243 (419)
                      |++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++..+.+...    ++ ..++
T Consensus       157 d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (396)
T 3jtx_A          157 DWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK  236 (396)
T ss_dssp             CGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTT
T ss_pred             CHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCc
Confidence            999999988878999999999999999999999999999999999999999999999887633222211    11 2457


Q ss_pred             EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769          244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES  322 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  322 (419)
                      ++++.|+||.|+++|+|+||++++.        ++++.+..... .+++++.+.|.++..+++.  .+++++.+++++++
T Consensus       237 ~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~  306 (396)
T 3jtx_A          237 LLMFTSLSKRSNVPGLRSGFVAGDA--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEK  306 (396)
T ss_dssp             EEEEEESTTTSSCGGGCCEEEEECH--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHH
T ss_pred             EEEEeccccccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHH
Confidence            8999999999899999999998864        67777776643 3567899999999988875  57889999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--------CCeEEEEe
Q 014769          323 AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------KNWLRIAF  394 (419)
Q Consensus       323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~~Ris~  394 (419)
                      ++.+.+.|+++  +. +..|.+|+|+|++++.      .+..++..+|++++||.+.||..|+.        .+++||++
T Consensus       307 ~~~l~~~l~~~--~~-~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~  377 (396)
T 3jtx_A          307 FERVIPILQQV--FD-VKLPDASFYIWLKVPD------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIAL  377 (396)
T ss_dssp             HHHHHHHHTTT--SC-CCCCSSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEEC
T ss_pred             HHHHHHHHHhc--CC-ccCCCeeEEEEEECCC------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEE
Confidence            99999999875  33 3478889999999874      25778888888888999999998874        48999999


Q ss_pred             ecCHHHHHHHHHHHHHHH
Q 014769          395 CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       395 ~~~~~~l~~~l~~l~~~~  412 (419)
                      +.+++++++++++|++++
T Consensus       378 ~~~~~~i~~~l~~l~~~l  395 (396)
T 3jtx_A          378 VADVATCVKAAEDIVSLY  395 (396)
T ss_dssp             CSCHHHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHHHh
Confidence            889999999999998865

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=6.4e-48  Score=366.60  Aligned_cols=377  Identities=23%  Similarity=0.382  Sum_probs=314.7

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +++....+.+.+..+.....+      .+++|+|+.|.+.    +++++.+.+++.+.+.... ..|++..|..++|+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~l   72 (389)
T 1gd9_A            4 SDRLELVSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLLELREAI   72 (389)
T ss_dssp             HHHHHHSCCCHHHHHHHHHHT------CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHH
T ss_pred             hhHhHhCChhHHHHHHHHHhh------hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcHHHHHHH
Confidence            345556667777777764321      2578999999863    4567899999999887643 4798888999999999


Q ss_pred             HHHHHhhCCCCCCCCc-EEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           94 ADYLSRDLPYKLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~-i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      ++++.+.+|..+++++ |++|+|+++++..++.+++++||+|++++|+|+++...+...|.+++.+++++++++.+|++.
T Consensus        73 a~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  152 (389)
T 1gd9_A           73 AEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDE  152 (389)
T ss_dssp             HHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHH
T ss_pred             HHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHH
Confidence            9999887787788899 999999999999999999999999999999999999999999999999998654467789999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSIS  251 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~s  251 (419)
                      ++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+|
T Consensus       153 l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  232 (389)
T 1gd9_A          153 LKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFS  232 (389)
T ss_dssp             HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEST
T ss_pred             HHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecCh
Confidence            99999878889999999999999999999999999999999999999999999887653445545432 45789999999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      |.++++|+|+||+++++        ++++.++.... .+++++.+.|.++..+|+... ..++++.+++++++++.+.+.
T Consensus       233 K~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (389)
T 1gd9_A          233 KTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKR  304 (389)
T ss_dssp             TTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            99988999999999864        57777776543 346778899999988887632 127888899999999999999


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGR  407 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~  407 (419)
                      |+++ ++. +..|.+|+++|++++...    .+..++...|++++||.+.||..|+.  .+++|++++.+++++++++++
T Consensus       305 L~~~-g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~  378 (389)
T 1gd9_A          305 LNEM-GLP-TVKPKGAFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDR  378 (389)
T ss_dssp             HHHT-TCC-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHH
T ss_pred             HHHc-CCe-ecCCCeeeEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHH
Confidence            9988 777 447888999998886311    25677888886688999999998864  689999998899999999999


Q ss_pred             HHHHHHHH
Q 014769          408 MKAFCQRH  415 (419)
Q Consensus       408 l~~~~~~~  415 (419)
                      |++++++.
T Consensus       379 l~~~~~~~  386 (389)
T 1gd9_A          379 MERVLKER  386 (389)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhc
Confidence            99998763

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=5.4e-48  Score=366.96  Aligned_cols=372  Identities=25%  Similarity=0.390  Sum_probs=312.0

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA   92 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   92 (419)
                      +..+....+.+.++.+.....+.. + .++++|+|+.|.+.    ++.++.+.+++.+.+.... ..|++..|..++|++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~   86 (389)
T 1o4s_A           14 VSRRISEIPISKTMELDAKAKALI-K-KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREG   86 (389)
T ss_dssp             CCHHHHHSCCCSSHHHHHHHHHHH-H-TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHH
T ss_pred             HHHHHhhcCccHHHHHHHHHHHHH-h-cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence            345566777777888776544332 2 47889999999863    4557899999999886543 479888899999999


Q ss_pred             HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      +++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.+++++++++.+|+++
T Consensus        87 la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  166 (389)
T 1o4s_A           87 IAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEE  166 (389)
T ss_dssp             HHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred             HHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHH
Confidence            99999887787778899999999999999999999999999999999999999999999999999998654567899999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSIS  251 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~s  251 (419)
                      |+++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+.. .++++++.|+|
T Consensus       167 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~s  245 (389)
T 1o4s_A          167 VEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFS  245 (389)
T ss_dssp             HHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEEST
T ss_pred             HHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeech
Confidence            999998888899999999999999999999999999999999999999999988765 2334444432 35689999999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      |.++++|+|+||+++++        ++++.+..... .+++++.+.|.++..+|+..    +++.+++++++++.+.+.|
T Consensus       246 K~~~~~G~r~G~l~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L  313 (389)
T 1o4s_A          246 KSHSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERL  313 (389)
T ss_dssp             TTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCcccceEEEEeCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHH
Confidence            99988999999999864        57777776543 34667888898888888763    6777888999999999999


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                      +++ ++. +..|.+++++|++++       .+..++..+|++++||.+.||..|+.++++|++++.++++|++++++|.+
T Consensus       314 ~~~-g~~-~~~~~~~~~~~~~~~-------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~  384 (389)
T 1o4s_A          314 KKM-GVK-FVEPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIED  384 (389)
T ss_dssp             HHT-TCC-CCCCSBSSEEEEECS-------SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHH
T ss_pred             Hhc-CCe-eecCCcceEEEEeCC-------CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHH
Confidence            988 777 446888999999886       14678888887678999999998887789999998899999999999998


Q ss_pred             HHH
Q 014769          411 FCQ  413 (419)
Q Consensus       411 ~~~  413 (419)
                      +++
T Consensus       385 ~l~  387 (389)
T 1o4s_A          385 FLN  387 (389)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            874

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.1e-48  Score=381.76  Aligned_cols=386  Identities=21%  Similarity=0.336  Sum_probs=295.5

Q ss_pred             HHHHHHHHHHhhhcCCCC-----CeeeccCCCCCCCCCCC---------------------ChHHHHHHHHHHHhCC---
Q 014769           25 VKTSLASIIDSVNKNDPR-----PVVPLGYGDPTAFPCFR---------------------TAVEAEDAIVDAVRSG---   75 (419)
Q Consensus        25 i~~~~~~~~~~~~~~~~~-----~~i~l~~g~~~~~~~~~---------------------~~~~v~~a~~~~~~~~---   75 (419)
                      |-..++++.+++.  .|.     ++|.+++|+|......|                     .|..+.+++.+++...   
T Consensus        43 ~~~~a~~~~~~~~--~g~~~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~  120 (498)
T 3ihj_A           43 IVLKAGEIELELQ--RGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGN  120 (498)
T ss_dssp             HHHHHHHHHHHHH--TTCCCSSSSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHh--ccCCCchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCC
Confidence            3344445544443  244     89999999986542211                     1334445556666542   


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhhC-CCCCCCCcEEEcccHHHHHHHHHHHhcCCCC----eEEeeCCCCCCcHHHHhh
Q 014769           76 KFNCYATNSGIPPARRAIADYLSRDL-PYKLSADDVYVTLGCKQAVEVILSVLARPGA----NVLLPRPGWPYYEGIAQR  150 (419)
Q Consensus        76 ~~~~Y~~~~g~~~lr~~ia~~l~~~~-~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd----~vlv~~p~~~~~~~~~~~  150 (419)
                      ....|+++.|..++|++|++++.+.+ |+.+++++|++|+|+++++..++++++++||    .|+++.|+|+.+...+..
T Consensus       121 ~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~  200 (498)
T 3ihj_A          121 SLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISE  200 (498)
T ss_dssp             -------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHH
Confidence            34689999999999999999999888 4888999999999999999999999998875    999999999999999999


Q ss_pred             cCCEEEEEeccCCCCcccChHHHHHhhcC-----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc
Q 014769          151 KQVEVRHFDLLPERNWEVDLDAVEALADK-----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL  225 (419)
Q Consensus       151 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~  225 (419)
                      .|..++.++++++++|.+|+++|++++++     +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+
T Consensus       201 ~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~  280 (498)
T 3ihj_A          201 LDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDN  280 (498)
T ss_dssp             TTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred             cCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccc
Confidence            99999999998877899999999998876     5789999999999999999999999999999999999999999999


Q ss_pred             ccCCC-CCCCccccC--------CCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchH
Q 014769          226 TFGSI-PYTPMGLFG--------SIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF  295 (419)
Q Consensus       226 ~~~~~-~~~~~~~~~--------~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  295 (419)
                      .|++. .+.++..+.        ...++++++||||.| |++|+|+||+++...     ++++++.+........+++.+
T Consensus       281 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~-----~~~l~~~l~~~~~~~~~~~~~  355 (498)
T 3ihj_A          281 VYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINL-----HPEIKGQLVKLLSVRLCPPVS  355 (498)
T ss_dssp             BCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESC-----CHHHHHHHHHHHHHSCCCCHH
T ss_pred             ccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecC-----CHHHHHHHHHHHhccCCCCHH
Confidence            98754 444544321        233589999999998 779999999984211     026778777766556778899


Q ss_pred             HHHHHHHHHccc-----c-h---HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc-------ccC
Q 014769          296 IQGAIPQILEKT-----K-E---DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL-------LED  359 (419)
Q Consensus       296 ~~~a~~~~l~~~-----~-~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~-------~~~  359 (419)
                      .|.++..++...     . .   ....+.+++++++++.+.+.|+++|++. +..|++|+|+|++++...       ..+
T Consensus       356 ~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~p~gg~~~~~~l~~p~~~~~~~~~~g  434 (498)
T 3ihj_A          356 GQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIH-CNPLQGAMYAFPRIFIPAKAVEAAQAHQ  434 (498)
T ss_dssp             HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECCCHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-ecCCCeEEEEEEeccCchhhhHHHHhcC
Confidence            999998888631     1 1   2345677889999999999999988988 448999999998764210       002


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      ..++..++.++++++||.+.||+.|+.   ..++|++++.+++++++++++|++++++++++
T Consensus       435 ~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~~  496 (498)
T 3ihj_A          435 MAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEK  496 (498)
T ss_dssp             SCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            222333377888889999999999984   46999999989999999999999999998765

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.4e-49  Score=380.94  Aligned_cols=356  Identities=24%  Similarity=0.377  Sum_probs=301.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .++++|||+.|.|.    +++++.+.+++.+++.......|++..|..++|+++++++.+.+|.++++++|++|+|++++
T Consensus        55 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a  130 (447)
T 3b46_A           55 QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG  130 (447)
T ss_dssp             TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred             cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            46789999999863    45679999999998875334589998899999999999999888888888999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC----------CcccChHHHHHhhcCCccEEEEeCC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER----------NWEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      +..++++++++||+|++++|+|+++...++..|.+++.+++++++          ++.+|++.|++++++++++|++++|
T Consensus       131 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  210 (447)
T 3b46_A          131 ILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP  210 (447)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESS
T ss_pred             HHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCC
Confidence            999999999999999999999999999999999999999886543          5789999999999888899999999


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc--CCCCcEEEEecCCCcCCCCCceeEEEEe-
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--GSIVPVITLGSISKRWLVPGWRFGWLVT-  266 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~-  266 (419)
                      +||||.++|.+++++|+++|+++|+++|+||+|..+.+++ ...++..+  +..++++++.|+||.++++|+|+||+++ 
T Consensus       211 ~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~  289 (447)
T 3b46_A          211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL  289 (447)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECS
T ss_pred             CCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeC
Confidence            9999999999999999999999999999999999998876 33344444  1235789999999999889999999998 


Q ss_pred             eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          267 NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      +.        ++++.+.... ...++++++.|.++.++|+... .+++++.+++++++++.+.+.|+++ ++. +..|.+
T Consensus       290 ~~--------~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~  359 (447)
T 3b46_A          290 NA--------ELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLP-YTAPEG  359 (447)
T ss_dssp             CH--------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCC-EECCSB
T ss_pred             CH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCe
Confidence            54        5777777653 3356778889999888887632 4678889999999999999999987 777 447889


Q ss_pred             eEEEEeecCcccccC----------CCCHHHHHHHHHHhcCeEeecCCCCCC-------CCeEEEEeecCHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLED----------INDDIEFALKLAKEESVIVTPGIYVGL-------KNWLRIAFCAEPSALKDGLGR  407 (419)
Q Consensus       345 g~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~gv~v~~g~~~~~-------~~~~Ris~~~~~~~l~~~l~~  407 (419)
                      |+|+|++++....+.          ..++.+++.+|++++||.+.||+.|+.       .+++||+++.++++|++++++
T Consensus       360 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~  439 (447)
T 3b46_A          360 TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVER  439 (447)
T ss_dssp             SSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHH
T ss_pred             eEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHH
Confidence            999999987421100          124567888887788999999988864       589999998899999999999


Q ss_pred             HHH
Q 014769          408 MKA  410 (419)
Q Consensus       408 l~~  410 (419)
                      |++
T Consensus       440 l~~  442 (447)
T 3b46_A          440 LKL  442 (447)
T ss_dssp             GGG
T ss_pred             HHH
Confidence            987

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=2.2e-48  Score=372.38  Aligned_cols=373  Identities=20%  Similarity=0.313  Sum_probs=312.6

Q ss_pred             hhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769           16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD   95 (419)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   95 (419)
                      +....+++.++.+..       ...+.++|+|+.|+|    .+++++.+.+++.+++.......|++..|..++|+++++
T Consensus         4 ~~~~~~~~~~~~~~~-------~~~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~   72 (410)
T 3e2y_A            4 RIEGLDSNVWVEFTK-------LAADPSVVNLGQGFP----DISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSC   72 (410)
T ss_dssp             GGTTCCCCHHHHTTT-------TTTSTTSEECSSCCC----CSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHH
T ss_pred             hhccCCccHHHHHHH-------HhcCCCeEEecCCCC----CCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHH
Confidence            344455555655543       123678999999985    367789999999999876555689998899999999999


Q ss_pred             HHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC---------CCC
Q 014769           96 YLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP---------ERN  165 (419)
Q Consensus        96 ~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~---------~~~  165 (419)
                      ++.+.+|..+++ ++|++|+|+++++..++.+++++||+|+++.|+|..+...+...|.+++.+++++         ..+
T Consensus        73 ~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~  152 (410)
T 3e2y_A           73 LYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSD  152 (410)
T ss_dssp             HHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGG
T ss_pred             HHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccC
Confidence            999888888888 8999999999999999999999999999999999999999999999999998763         245


Q ss_pred             cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcE
Q 014769          166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPV  244 (419)
Q Consensus       166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~  244 (419)
                      +.+|++.+++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++..+.++..+. ..+++
T Consensus       153 ~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~  232 (410)
T 3e2y_A          153 WTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERT  232 (410)
T ss_dssp             EECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGE
T ss_pred             CcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeE
Confidence            67899999999988899999999999999999999999999999999999999999999998876655555554 34578


Q ss_pred             EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc------cchHHHHHHHH
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK------TKEDFFCKLID  317 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~  317 (419)
                      +++.|+||.++++|+|+||+++++        ++++.++.... .+++++++.|.++..+++.      ...+++++.++
T Consensus       233 i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  304 (410)
T 3e2y_A          233 ITIGSAGKTFSVTGWKLGWSIGPA--------HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPK  304 (410)
T ss_dssp             EEEEEHHHHSSCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHH
T ss_pred             EEEecchhhcCCCCceEEEEEECH--------HHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHH
Confidence            999999999989999999999865        57777776543 3567888999999888873      22567889999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC-------CCHHHHHHHHHHhcCeEeecCCCCCC----
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI-------NDDIEFALKLAKEESVIVTPGIYVGL----  386 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v~~g~~~~~----  386 (419)
                      +++++++.+.+.|+++ ++. +..|++|+|+|++++.... +.       .++.+++.++++++||.+.||+.|+.    
T Consensus       305 ~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~  381 (410)
T 3e2y_A          305 ELEVKRDRMVRLLNSV-GLK-PIVPDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSK  381 (410)
T ss_dssp             HHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTH
T ss_pred             HHHHHHHHHHHHHHHC-CCe-ecCCCccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCC
Confidence            9999999999999988 777 4578999999998864211 01       11357888888889999999998864    


Q ss_pred             ---CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          387 ---KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       387 ---~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                         .+++||+++.++++|++++++|++
T Consensus       382 ~~~~~~iRis~~~~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          382 PHFEKLVRFCFIKKDSTLDAAEEIFRA  408 (410)
T ss_dssp             HHHTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEEEcCCHHHHHHHHHHHHh
Confidence               589999998899999999999975

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=1.1e-48  Score=373.42  Aligned_cols=376  Identities=20%  Similarity=0.293  Sum_probs=306.7

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +++....++..+..+.... .   +..+.++|||+.|.+.    ++.++.+.+++.+++.......|+++.|..++|+++
T Consensus        23 ~~~~~~~~~~~~~~~~~~~-~---~~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i   94 (404)
T 2o1b_A           23 SNKLANIPDSYFGKTMGRK-I---EHGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAI   94 (404)
T ss_dssp             CHHHHTSCCCTTC-----------CCCSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHH
T ss_pred             hhHhhhCCchHHHHHHHHH-H---hcCCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Confidence            4445555555555444322 1   1346779999999863    446789999999887543234788878999999999


Q ss_pred             HHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           94 ADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        94 a~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      ++++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|+++...++..|.+++.+++++ +++.+|++.
T Consensus        95 a~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~  173 (404)
T 2o1b_A           95 VDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSK  173 (404)
T ss_dssp             HHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGG
T ss_pred             HHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHH
Confidence            99998877877777 7999999999999999999999999999999999999999999999999998865 456789999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSIS  251 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~s  251 (419)
                      |++++++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ..++..+. ..++++++.|+|
T Consensus       174 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~s  252 (404)
T 2o1b_A          174 VDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK-NPSILASENGKDVAIEIYSLS  252 (404)
T ss_dssp             SCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC-CCCGGGSTTHHHHEEEEEEST
T ss_pred             HHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCCEEEEEecc
Confidence            9888876788999999999999999999999999999999999999999999888653 33333332 234689999999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      |.++++|+|+||+++++        ++++.++.... .+++++.+.|.++.++|+.. .+++++.+++++++++.+.+.|
T Consensus       253 K~~g~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L  323 (404)
T 2o1b_A          253 KGYNMSGFRVGFAVGNK--------DMIQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAML  323 (404)
T ss_dssp             TTTTCGGGCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCchhheEeEecCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHH
Confidence            99988999999999854        57777776543 34678899999999988764 5788899999999999999999


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                      +++ ++. +..|.+|+|+|++++..     .+..+++.++++++||.+.||..|+.  ++++||+++.+++++++++++|
T Consensus       324 ~~~-g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l  396 (404)
T 2o1b_A          324 AKA-DLP-FVHAKGGIYVWLETPPG-----YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRL  396 (404)
T ss_dssp             HHT-TCC-EECCCBSSEEEEECCTT-----CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHH
T ss_pred             Hhc-CCe-ecCCCcceEEEEeCCCC-----CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHH
Confidence            988 777 44778899999998742     24677888887778999999998874  6899999987889999999999


Q ss_pred             HHHHHHH
Q 014769          409 KAFCQRH  415 (419)
Q Consensus       409 ~~~~~~~  415 (419)
                      +++++++
T Consensus       397 ~~~l~~~  403 (404)
T 2o1b_A          397 TELAYLY  403 (404)
T ss_dssp             HGGGGGG
T ss_pred             HHHHHhh
Confidence            9888764

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.1e-48  Score=370.92  Aligned_cols=357  Identities=19%  Similarity=0.258  Sum_probs=306.9

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVE  121 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~  121 (419)
                      .+|||+.|++.   .+++++.+++++.+++.......|++..|..++++++++++.+.+|..+++ ++|++|+|+++++.
T Consensus        40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~  116 (407)
T 3nra_A           40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF  116 (407)
T ss_dssp             CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence            48999999875   256789999999998875444478888899999999999999988887767 79999999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC----CCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769          122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP----ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      .++.+++++||+|+++.|+|.++...++..|.+++.+++++    +.++.+|++.++++++++++++++++|+||||.++
T Consensus       117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~  196 (407)
T 3nra_A          117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY  196 (407)
T ss_dssp             HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence            99999999999999999999999999999999999998743    35678999999999988889999999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC--CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG--SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      |.+++++|+++|+++|+++|+||+|+.+.+++....++..++  ..++++++.|+||.++++|+|+||++++.       
T Consensus       197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------  269 (407)
T 3nra_A          197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR-------  269 (407)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH-------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH-------
Confidence            999999999999999999999999999998877666665553  35578999999999989999999999864       


Q ss_pred             hhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          276 SGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       276 ~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                       ++++.++... ....+++++.+.++..+++.. .+++++.+++++++++.+.+.|++++++. +..|.+|+|+|+.++.
T Consensus       270 -~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~  346 (407)
T 3nra_A          270 -AIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA-PGWMEDRIARHQAIRDELLHVLRGCEGVF-ARTPQAGSYLFPRLPK  346 (407)
T ss_dssp             -HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC-TTHHHHHHHHHHHHHHHHHHHHHTSTTCB-CCCCSBSSEECCBCCC
T ss_pred             -HHHHHHHHHHhhhccCCChHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEeCCC
Confidence             6777777664 334566788888888887642 46788888999999999999999988888 4478888999998875


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ..    .+..++...|++++||.+.||..|+.  .+++||+++.++++|++++++|++++++++
T Consensus       347 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~  406 (407)
T 3nra_A          347 LA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR  406 (407)
T ss_dssp             BS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred             CC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence            21    25678888887778999999998873  689999998899999999999999998865

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=4.3e-48  Score=369.83  Aligned_cols=390  Identities=25%  Similarity=0.448  Sum_probs=312.3

Q ss_pred             cCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 014769           12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARR   91 (419)
Q Consensus        12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~   91 (419)
                      .++++.++...+.+..+.  ..+.+.+ .++++|+|+.|.|... .++.++.+.+++.+.+.... ..|++..|..++|+
T Consensus        11 ~~~~~~~~~~~~~~~~~~--~~~~~~~-~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~   85 (406)
T 1xi9_A           11 RASKRALSVEYAIRDVVL--PARELEK-KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRK   85 (406)
T ss_dssp             CCCHHHHTCCC---------CHHHHHH-TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHH
T ss_pred             hHHHHHhcCChhHHHHHH--HHHHHHH-cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHH
Confidence            456666667777666655  3333332 3788999999987421 24567899999998887643 47988889999999


Q ss_pred             HHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChH
Q 014769           92 AIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLD  171 (419)
Q Consensus        92 ~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  171 (419)
                      ++++++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.+++++++++.+|++
T Consensus        86 ~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  165 (406)
T 1xi9_A           86 AIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDID  165 (406)
T ss_dssp             HHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHH
T ss_pred             HHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHH
Confidence            99999998888888899999999999999999999999999999999999999999999999999998865456778999


Q ss_pred             HHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecC
Q 014769          172 AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSI  250 (419)
Q Consensus       172 ~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~  250 (419)
                      .|++++++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..++ .++ +++++|+
T Consensus       166 ~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~  243 (406)
T 1xi9_A          166 DIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGL  243 (406)
T ss_dssp             HHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEES
T ss_pred             HHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEecc
Confidence            9999998888999999999999999999999999999999999999999999988743 333444454 456 8999999


Q ss_pred             CCcCCCCCceeEEEE--eeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLV--TNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       251 sK~~~~~G~r~G~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      ||.++++|+|+||++  ++++. .   .++++.+.......++++.+.|.++.++|+.. .+++++.+++++++++.+.+
T Consensus       244 sK~~~~~G~r~G~~~~~~~~~~-~---~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~  318 (406)
T 1xi9_A          244 SKVYFATGWRLGYMYFVDPENK-L---SEVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYK  318 (406)
T ss_dssp             TTTTCCGGGCCEEEEEECTTCT-T---HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCccEEEEEEEecCchh-H---HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHH
Confidence            999988999999998  54210 0   03666666554322677888999999999643 45688889999999999999


Q ss_pred             HhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHH
Q 014769          329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLG  406 (419)
Q Consensus       329 ~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~  406 (419)
                      .|+++|++. +..|.+|+++|++++...   ..+..++...+++++||.+.||..|+.  .+++||+++.++++|+++++
T Consensus       319 ~L~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~  394 (406)
T 1xi9_A          319 RLNEIPGIS-TTKPQGAFYIFPKIEVGP---WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMD  394 (406)
T ss_dssp             HHHTSTTEE-CCCCCBSSEECCEECSCS---CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHH
T ss_pred             HHHhCCCCe-eecCCeeEEEEEecCccC---CCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHH
Confidence            999988887 447888999998876310   125677888887688999999998875  68999999989999999999


Q ss_pred             HHHHHHHHHhc
Q 014769          407 RMKAFCQRHTK  417 (419)
Q Consensus       407 ~l~~~~~~~~~  417 (419)
                      +|+++++++.+
T Consensus       395 ~l~~~l~~~~~  405 (406)
T 1xi9_A          395 RFEKFMKERLK  405 (406)
T ss_dssp             HHHHHHHHC--
T ss_pred             HHHHHHHHHhc
Confidence            99999987643

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=1.1e-47  Score=369.04  Aligned_cols=378  Identities=20%  Similarity=0.240  Sum_probs=305.6

Q ss_pred             cccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHH-------------HHHHHHHHhC
Q 014769            8 KWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEA-------------EDAIVDAVRS   74 (419)
Q Consensus         8 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v-------------~~a~~~~~~~   74 (419)
                      +|+...+++.+..+++.++.+.+...+     .++++|+|+.|.|.... +|. ..+             .++..+.   
T Consensus         2 ~~~~~~s~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~p~~~~-~p~-~~~~~~~~~~~~~~~~~~~~~~~---   71 (425)
T 2r2n_A            2 NYARFITAASAARNPSPIRTMTDILSR-----GPKSMISLAGGLPNPNM-FPF-KTAVITVENGKTIQFGEEMMKRA---   71 (425)
T ss_dssp             CGGGGSCHHHHTCCCCSGGGHHHHHHH-----SCTTCEECCCCCCCGGG-CSE-EEEEEEETTSCCEEECHHHHHHH---
T ss_pred             chhHHHHHHHhcCCCchHHHHHHHhhc-----CCCCeEEcCCcCCCchh-CCH-HHHHHHHhhcccccccccchhhh---
Confidence            366667888888899999988874432     14679999999986321 221 100             1111111   


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-------CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH
Q 014769           75 GKFNCYATNSGIPPARRAIADYLSRDLPYKLS-------ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI  147 (419)
Q Consensus        75 ~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~  147 (419)
                         ..|+++.|++++|++|++++.+.+|...+       +++|++|+|+++++..++++++++||+|++++|+|+++...
T Consensus        72 ---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~  148 (425)
T 2r2n_A           72 ---LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS  148 (425)
T ss_dssp             ---TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH
T ss_pred             ---cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH
Confidence               37999999999999999999988887664       37999999999999999999999999999999999999999


Q ss_pred             HhhcCCEEEEEeccCCCCcccChHHHHHhhc------------CCccEEEE-eCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769          148 AQRKQVEVRHFDLLPERNWEVDLDAVEALAD------------KNTAAMVI-INPGNPCGNVFTYHHLQEIAEMARKLRV  214 (419)
Q Consensus       148 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~  214 (419)
                      ++..|.+++.++++.   .++|++.|+++++            ++++++++ ++|+||||.++|.+++++|+++|+++|+
T Consensus       149 ~~~~g~~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~  225 (425)
T 2r2n_A          149 LHPLGCNIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF  225 (425)
T ss_dssp             HGGGTCEEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHcCCEEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCC
Confidence            999999999998753   2589999999886            35677765 5899999999999999999999999999


Q ss_pred             eEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCc
Q 014769          215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIP  293 (419)
Q Consensus       215 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~  293 (419)
                      ++|+||+|+++.|++....++..++..+++++++||||.++ +|+|+||+++++        ++++.+.... ..+++++
T Consensus       226 ~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~  296 (425)
T 2r2n_A          226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTLHPS  296 (425)
T ss_dssp             EEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTCSSC
T ss_pred             EEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcCCCC
Confidence            99999999999888766666666666678999999999987 999999999975        5777777664 3356789


Q ss_pred             hHHHHHHHHHHcccc----hHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHH
Q 014769          294 TFIQGAIPQILEKTK----EDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFAL  368 (419)
Q Consensus       294 ~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~  368 (419)
                      .+.|.++..+|+...    .+++++.+++++++++.+.+.|++ +|++..+..|.+|+|+|++++..     .+..+++.
T Consensus       297 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----~~~~~~~~  371 (425)
T 2r2n_A          297 TFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----NDVKELIE  371 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----SCCHHHHH
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----CCHHHHHH
Confidence            999999999987521    366788889999999999999987 67763244789999999999742     13455444


Q ss_pred             HHHHhcCeEeecCCCCCC-----CCeEEEEee-cCHHHHHHHHHHHHHHHHHH
Q 014769          369 KLAKEESVIVTPGIYVGL-----KNWLRIAFC-AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       369 ~ll~~~gv~v~~g~~~~~-----~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +.+.++||.+.||..|+.     .+++||+++ .+++++++++++|++++++.
T Consensus       372 ~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~  424 (425)
T 2r2n_A          372 EKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES  424 (425)
T ss_dssp             THHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence            555788999999998864     479999996 79999999999999998764

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=3.4e-48  Score=367.45  Aligned_cols=371  Identities=12%  Similarity=0.101  Sum_probs=289.0

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHH-hCCCCCCCCCCCCCHHHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAV-RSGKFNCYATNSGIPPAR   90 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~-~~~~~~~Y~~~~g~~~lr   90 (419)
                      ..+.+...+++.|..++..+.+    ...+++|||+.|.| ...+.+++++.+.++.. .+ ......+|+++.|.++||
T Consensus         4 ~~~~~~~~~~~~i~~~~~~~~~----~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr   78 (405)
T 3k7y_A            4 LLSSLENIEVDNILKTAREFKE----DTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFS   78 (405)
T ss_dssp             GGGGCCCCCCCHHHHHHHHHTT----SSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHH
T ss_pred             hhhcCCCCCCChHHHHHHHHhc----CCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHH
Confidence            3455667788888888875433    33578999999974 22334567788888876 43 334456899999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCc--EEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769           91 RAIADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW  166 (419)
Q Consensus        91 ~~ia~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  166 (419)
                      ++|++|+.+..+..+++++  +++|+|+++|+..++.+++.  + |+|++++|+|+.|...++..|.+++.+++..++++
T Consensus        79 ~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  157 (405)
T 3k7y_A           79 TLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLI  157 (405)
T ss_dssp             HHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTT
T ss_pred             HHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccC
Confidence            9999999776665666775  59999999999999999988  8 99999999999999999999999999998545568


Q ss_pred             ccChHHHHHhhcC--CccEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--CCCcccc-CC
Q 014769          167 EVDLDAVEALADK--NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLF-GS  240 (419)
Q Consensus       167 ~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~  240 (419)
                      ++|++.+++++++  +++++++++| |||||.+++.+++++|+++|+++++++|+||+|.++.+++..  ..++..+ ..
T Consensus       158 ~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~  237 (405)
T 3k7y_A          158 DINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEK  237 (405)
T ss_dssp             EECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTT
T ss_pred             CcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhc
Confidence            9999999998864  4567777665 899999999999999999999999999999999999876421  1122222 22


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH----Hhhh-ccccCCchHHHHHHHHHHcccc-----hH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI----KDCL-SIYSDIPTFIQGAIPQILEKTK-----ED  310 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l----~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~  310 (419)
                      .+++++++||||.|+++|+|+||+++....     +++++.+    .... .....++..+|.++..++....     .+
T Consensus       238 ~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~  312 (405)
T 3k7y_A          238 NIAFSVCQSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIK  312 (405)
T ss_dssp             TCCEEEEEECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             CCcEEEEeeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHH
Confidence            358999999999999999999999753211     1344433    3222 2334567788988888887631     23


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh----cCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVK----EIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY  383 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~----~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~  383 (419)
                      ++++++++++++++.+.+.|+    ++.   ++. +..|++|+|+|+.++.          +++.+| +++||.+.||. 
T Consensus       313 ~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~-  379 (405)
T 3k7y_A          313 ELSQLSQRITNNRILFFNKLETYQKKYNLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG-  379 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC-
Confidence            466777889999999999998    762   145 4589999999987752          345566 88999999964 


Q ss_pred             CCCCCeEEEEee-cCHHHHHHHHHHHHHHHHH
Q 014769          384 VGLKNWLRIAFC-AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       384 ~~~~~~~Ris~~-~~~~~l~~~l~~l~~~~~~  414 (419)
                             |||++ .+++++++++++|+++++.
T Consensus       380 -------Ris~a~~~~~~i~~~~~~i~~~~~~  404 (405)
T 3k7y_A          380 -------RINVSGITKNNVDYIADKICLSLSQ  404 (405)
T ss_dssp             -------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred             -------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence                   99995 6899999999999998864

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=4.9e-48  Score=365.81  Aligned_cols=352  Identities=18%  Similarity=0.274  Sum_probs=303.9

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      ..|+++|||+.|++    .++.++.+.+++.+.+.... ..|++ .| .++|+++++++.+.+|..+++++|++|+|+++
T Consensus        20 ~~g~~~idl~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~   92 (377)
T 3fdb_A           20 RYGQGVLPLWVAES----DFSTCPAVLQAITDAVQREA-FGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVR   92 (377)
T ss_dssp             SSCTTSEECCSSCC----CSCCCHHHHHHHHHHHHTTC-CSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred             ccCCCeeeecccCC----CCCCCHHHHHHHHHHHHcCC-CCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHH
Confidence            35889999999974    35778999999999987643 47888 77 89999999999988888889999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      +++.++.+++++||+|+++.|+|.++...++..|.+++.++++++    +|++.++++++++++++++++|+||||.++|
T Consensus        93 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~  168 (377)
T 3fdb_A           93 GLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFA  168 (377)
T ss_dssp             HHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCC
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999987643    8999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCC-CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      .+++++|+++|+++|+++|+||+|+.+.+++ ....++..+...++++++.|+||.++++|+|+||+++.++       +
T Consensus       169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-------~  241 (377)
T 3fdb_A          169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNP-------S  241 (377)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSH-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCH-------H
Confidence            9999999999999999999999999998877 5555554444456789999999999899999999887542       5


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCcc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPW  355 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~  355 (419)
                      +++.++.... .+++++++.+.++..+++.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~  319 (377)
T 3fdb_A          242 DAEHWQQLSPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQATYLMWIDFRDT  319 (377)
T ss_dssp             HHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCE-ECCCSBCSEEEEECTTS
T ss_pred             HHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCeeEEEEEECccc
Confidence            7777776543 35678899999988888754 577889999999999999999998 78888 55888999999998753


Q ss_pred             cccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .     .+.+++..+++++||.+.||..|+.  ++++|++++.+++++++++++|+++++++
T Consensus       320 ~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~  376 (377)
T 3fdb_A          320 T-----IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSHH  376 (377)
T ss_dssp             C-----CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred             C-----CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence            1     1246777887878999999998875  68999999889999999999999998754

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=2e-47  Score=369.94  Aligned_cols=383  Identities=17%  Similarity=0.215  Sum_probs=305.0

Q ss_pred             CchhhhhCCchhH-HHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC----CCCCCCCCCCCCH
Q 014769           13 DKQEHKAAPAVTV-KTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----GKFNCYATNSGIP   87 (419)
Q Consensus        13 ~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~~g~~   87 (419)
                      +.++....++..+ ..+.........+.++.++|+|+.|++    .++.++.+.+++.+++..    .....|++..|..
T Consensus        39 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~  114 (449)
T 3qgu_A           39 RNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDT----TEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQG  114 (449)
T ss_dssp             CCHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCC----CCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCH
T ss_pred             hhHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCC----CCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcH
Confidence            3444444444433 355544444343456889999999975    466789999999998873    3345898889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCE----------EEE
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE----------VRH  157 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~----------~~~  157 (419)
                      +||+++++++.  +|.++++++|++|+|+++++..+ ..++++||+|++++|+|.++...+...|.+          ++.
T Consensus       115 ~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~  191 (449)
T 3qgu_A          115 ALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEY  191 (449)
T ss_dssp             HHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEE
T ss_pred             HHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEE
Confidence            99999999997  77788899999999999999998 888899999999999999999999999988          899


Q ss_pred             EeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769          158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                      +++++++++..+++.+     +++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++....++..
T Consensus       192 ~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~  266 (449)
T 3qgu_A          192 MVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYE  266 (449)
T ss_dssp             EECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGG
T ss_pred             EecccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhh
Confidence            9987655555665432     47899999999999999999999999999999999999999999999988765556655


Q ss_pred             cCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc--hhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHH
Q 014769          238 FGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ--KSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       238 ~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~--~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      ++. .++++++.|+||.++++|+|+||++++++  +..  ...+...+.... ..++++++++|.++..++.....++++
T Consensus       267 ~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~  344 (449)
T 3qgu_A          267 IPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA--LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN  344 (449)
T ss_dssp             STTGGGTEEEEEECSGGGTCTTCCCEEEECCTT--CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHH
T ss_pred             ccCCCCcEEEEecchhhcCCccceeEEEecCHH--HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHH
Confidence            543 35689999999999999999999998653  210  001122333332 234578899999998888763346788


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEE
Q 014769          314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLR  391 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~R  391 (419)
                      +.+++++++++.+.+.|+++ ++. +..|.+|+|+|+.++ .     .+..+++..|++++||.+.||..|+.  ++++|
T Consensus       345 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~-~-----~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iR  416 (449)
T 3qgu_A          345 AMIKFYKENAQILKTTFTEM-GFS-VYGGDDAPYIWVGFP-G-----KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVR  416 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCC-EEESSSSSEEEEECT-T-----SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCe-eeCCCCeeEEEEECC-C-----CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEE
Confidence            99999999999999999988 777 447888999999987 2     25778888898888999999998875  68999


Q ss_pred             EEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769          392 IAFCAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       392 is~~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      |++..++++|++++++|++++++...
T Consensus       417 is~~~~~e~i~~~l~~l~~~~~~~~~  442 (449)
T 3qgu_A          417 ASAFGSRENILEAVRRFKEAYGKRNA  442 (449)
T ss_dssp             EECCSCHHHHHHHHHHHHHHHC----
T ss_pred             EEecCCHHHHHHHHHHHHHHHHhcCc
Confidence            99988999999999999999876543

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=3.2e-47  Score=361.38  Aligned_cols=349  Identities=23%  Similarity=0.355  Sum_probs=297.3

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAV  120 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al  120 (419)
                      .++|+|+.|.+.    +++++.+.+++.+.+... ...|++..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus        30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~  104 (386)
T 1u08_A           30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL  104 (386)
T ss_dssp             TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred             CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence            468999999863    456789999999988753 34798888999999999999988888788888 999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++++++++||+|++++|+|+++...++..|.+++.++++++ ++.+|++.++++++++++++++++|+||||.++|.+
T Consensus       105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  183 (386)
T 1u08_A          105 YAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA  183 (386)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHH
Confidence            9999999999999999999999999999999999999988643 568999999999987889999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      ++++|+++|+++|+++|+||+|+.+.+++....++..+. ..++++++.|+||.++++|+|+||+++++        +++
T Consensus       184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~  255 (386)
T 1u08_A          184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PIS  255 (386)
T ss_dssp             HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HHH
T ss_pred             HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--------HHH
Confidence            999999999999999999999999988765544554442 23568999999999988999999999865        577


Q ss_pred             HHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          280 DSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       280 ~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      +.++.... ..++++.+.|.++..+|+.. .+++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++...  
T Consensus       256 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~--  330 (386)
T 1u08_A          256 AEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS--  330 (386)
T ss_dssp             HHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC--
T ss_pred             HHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCceEEEEEecCCCC--
Confidence            77776543 35677888898988888764 5788899999999999999999987 777 447888999999987420  


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVG----LKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                       ..+..++..++++++||.+.||..|+    .++++||+++.++++|++++++|++
T Consensus       331 -~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~  385 (386)
T 1u08_A          331 -TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ  385 (386)
T ss_dssp             -CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred             -CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence             02467788888778899999998875    3679999998899999999999864

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=3.8e-47  Score=361.45  Aligned_cols=357  Identities=18%  Similarity=0.249  Sum_probs=306.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .++++|||+.|++    .+++++.+.+++.+.+.... ..|++.  ..++++++++++.+.+|.++++++|++|+|++++
T Consensus        25 ~g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a   97 (391)
T 3dzz_A           25 LKEKELPMWIAEM----DFKIAPEIMASMEEKLKVAA-FGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPA   97 (391)
T ss_dssp             CCTTCEECCSSCC----SSCCCHHHHHHHHHHHTTCC-CCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHH
T ss_pred             cCCCceeccccCC----CCCCCHHHHHHHHHHHhcCc-CCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHH
Confidence            3679999999974    46788999999999987643 367764  6899999999999988888889999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc-CCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~  197 (419)
                      +..++.++.++||+|+++.|+|.++...+...|.+++.++++ .++++.+|++.++++++ +++++|++++|+||||.++
T Consensus        98 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~  177 (391)
T 3dzz_A           98 ISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAW  177 (391)
T ss_dssp             HHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCC
T ss_pred             HHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCccc
Confidence            999999999999999999999999999999999999999885 34456799999999997 6889999999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      |.+++++|+++|+++|+++|+||+|+.+.+.+....++..+..  .++++++.|+||.++++|+|+||++++++      
T Consensus       178 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~------  251 (391)
T 3dzz_A          178 SEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNP------  251 (391)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSH------
T ss_pred             CHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCH------
Confidence            9999999999999999999999999999888766666655543  35789999999999899999999998742      


Q ss_pred             hhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeec
Q 014769          276 SGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKL  352 (419)
Q Consensus       276 ~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~  352 (419)
                       ++++.++....  ..++++++.+.++..+++. ..+++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.+
T Consensus       252 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~  328 (391)
T 3dzz_A          252 -DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDI  328 (391)
T ss_dssp             -HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEEC
T ss_pred             -HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEeh
Confidence             57777776532  2457788888888888876 3577889999999999999999998 88888 55888999999988


Q ss_pred             CcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          353 NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       353 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +...    .+..++...|++++||.+.||..|+.  ++++|++++.+++++++++++|+++++++.
T Consensus       329 ~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~~  390 (391)
T 3dzz_A          329 SALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNLN  390 (391)
T ss_dssp             GGGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred             hhcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence            7521    25778888887688999999998876  489999999899999999999999998753

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.6e-47  Score=362.16  Aligned_cols=350  Identities=21%  Similarity=0.297  Sum_probs=293.8

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~  117 (419)
                      +.|.++|||+.|.+.    ++.++.+.+++.+++.......|++..|..++|+++++++.+.+|..++++ +|++|+|++
T Consensus        22 ~~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~   97 (376)
T 2dou_A           22 ERGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQ   97 (376)
T ss_dssp             HTTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHH
T ss_pred             ccCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcH
Confidence            347889999999863    456789999999988654455788767889999999999988778777777 999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      +++..++++++++||+|++++|+|+++...++..|.+++.+++  ++++.+|++.++++++++++++++++|+||||.++
T Consensus        98 ~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  175 (376)
T 2dou_A           98 EGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVA  175 (376)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccC
Confidence            9999999999999999999999999999999999999999887  45667899999888876788999999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      |.+++++|+++|+++|+++|+||+|+.+.+++.....+...+..+++++++|+||.++++|+|+||+++++        +
T Consensus       176 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~  247 (376)
T 2dou_A          176 DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------E  247 (376)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------H
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------H
Confidence            99999999999999999999999999988866322222222334578999999999988999999999864        5


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.++.... .+.+++.+.|.++..+++.. .+++++.+++++++++.+.+.|+++  +. +..|.+|+|+|++++.. 
T Consensus       248 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~-  322 (376)
T 2dou_A          248 ALARLERVKGVIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLWGRLPEG-  322 (376)
T ss_dssp             HHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEEEECCTT-
T ss_pred             HHHHHHHHHHhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEEEECCCC-
Confidence            7777776543 34567889999999999763 5788889999999999999999886  55 44678899999998742 


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                          .+..++...|+++ ||.+.||..|+.  ++++|++++.+++++++++++|++++
T Consensus       323 ----~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          323 ----VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL  375 (376)
T ss_dssp             ----CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred             ----CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence                2467788888665 999999998874  68999999878999999999998764

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=4.3e-47  Score=362.13  Aligned_cols=357  Identities=18%  Similarity=0.270  Sum_probs=299.6

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      +++|+|+.|++.    +++++.+.+++.+.+... ...|++.  ..++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus        31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~  103 (399)
T 1c7n_A           31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF  103 (399)
T ss_dssp             TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred             CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence            589999999853    567889999999988643 3478764  899999999999887787788899999999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCH
Q 014769          122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~  199 (419)
                      .++++++++||+|++++|+|+++...+...|.+++.++++++ +++.+|++.|+++++ +++++|++++|+||||.++|.
T Consensus       104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~  183 (399)
T 1c7n_A          104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK  183 (399)
T ss_dssp             HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred             HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence            999999999999999999999999999999999998887533 346799999999987 578889999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      +++++|+++|+++|+++|+||+|+.+.+++..+.++..+..  .++++++.|+||.++++|+|+||++++++       +
T Consensus       184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~  256 (399)
T 1c7n_A          184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-------D  256 (399)
T ss_dssp             HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-------H
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCH-------H
Confidence            99999999999999999999999999887765555555543  45789999999999889999999998641       4


Q ss_pred             HHHHHHhhhccc--cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCc
Q 014769          278 IIDSIKDCLSIY--SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       278 ~~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                      +++.++......  .+++++.+.++.++++.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus       257 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~  334 (399)
T 1c7n_A          257 IRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDFRA  334 (399)
T ss_dssp             HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEECGG
T ss_pred             HHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCe-EecCCceEEEEEEccc
Confidence            777776654322  367888998888888753 577888999999999999999998 88887 4478889999998864


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      ..    .+..++...|++++||.+.||..|+  ..+++||+++..++++++++++|+++++++.++
T Consensus       335 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~~  396 (399)
T 1c7n_A          335 LK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKNR  396 (399)
T ss_dssp             GC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC--
T ss_pred             CC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHhc
Confidence            21    2467788888667899999999886  368999999877899999999999999987655

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.5e-47  Score=363.32  Aligned_cols=356  Identities=26%  Similarity=0.421  Sum_probs=299.4

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a  119 (419)
                      ..++|+|+.|.+.    ++.++.+.+++.+++... ...|++..|..++|+++++++.+.+|.+++++ +|++|+|++++
T Consensus        24 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~a   98 (411)
T 2o0r_A           24 RIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEA   98 (411)
T ss_dssp             TTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHH
T ss_pred             cCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHH
Confidence            4568999999863    456789999999998764 45899888999999999999988888778888 99999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      +..++.+++++||+|++++|+|+++...+...|.+++.++++++ .++.+|++.|++++++++++|++++|+||||.++|
T Consensus        99 l~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~  178 (411)
T 2o0r_A           99 IAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLS  178 (411)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999987653 34679999999999888899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      .+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++++|+|+||+++++        +
T Consensus       179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~  250 (411)
T 2o0r_A          179 ATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPA--------E  250 (411)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCH--------H
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCH--------H
Confidence            999999999999999999999999999887655555555432 4578999999999988999999999864        5


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL  356 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~  356 (419)
                      +++.+..... .+++.+.+.|.++..+|+.. .+++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++...
T Consensus       251 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~  327 (411)
T 2o0r_A          251 LIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEI-GFA-VHDSYGTYFLCADPRPLG  327 (411)
T ss_dssp             HHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHH-TCE-ECCCCBSSEEEEECGGGT
T ss_pred             HHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHc-CCE-ecCCCeeEEEEEecCCCC
Confidence            7777766542 34566778888888888754 5778889999999999999999887 777 447788999999986420


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCC-------------CCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVG-------------LKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                         ..+..++..++++++||.+.||..|.             ..+++||+++.+++++++++++|++++++.
T Consensus       328 ---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~~  396 (411)
T 2o0r_A          328 ---YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERP  396 (411)
T ss_dssp             ---CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC--
T ss_pred             ---CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence               02467888888778899999998873             246899999888999999999999887654

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=2.6e-46  Score=357.69  Aligned_cols=386  Identities=19%  Similarity=0.291  Sum_probs=312.6

Q ss_pred             ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCC
Q 014769            9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGI   86 (419)
Q Consensus         9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~   86 (419)
                      |+...+++.....++.++.++....+ + +..|.++|||+.|.|...  ..+++.+.+++.+++...  ... |+++.|.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~idl~~g~~~~~--~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~   77 (407)
T 2zc0_A            3 YTKYLAGRANWIKGSALADVMKKASE-L-QKKGVKLISLAAGDPDPE--LIPRAVLGEIAKEVLEKEPKSVM-YTPANGI   77 (407)
T ss_dssp             GGGGSCGGGGGCCCCHHHHHHHHHHH-H-HHSSCCCEECCSCCCCTT--TSCHHHHHHHHHHHHHHCGGGGS-CCCTTCC
T ss_pred             chhhhhhhhccCCchHHHHHHHhhhc-c-cCCCCceEeCCCCCCCch--hCCHHHHHHHHHHHHhhcccccc-CCCCCCC
Confidence            33345566666677777777764331 1 123668999999987532  346788999999888653  234 8888899


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW  166 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  166 (419)
                      .++|+++++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+++...+...|.+++.++++++   
T Consensus        78 ~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---  154 (407)
T 2zc0_A           78 PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---  154 (407)
T ss_dssp             HHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---
Confidence            99999999999887887788899999999999999999999999999999999999999999999999999987542   


Q ss_pred             ccChHHHHHhhc----C--CccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          167 EVDLDAVEALAD----K--NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       167 ~~~~~~l~~~~~----~--~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      ++|++.|+++++    +  ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++
T Consensus       155 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  234 (407)
T 2zc0_A          155 GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD  234 (407)
T ss_dssp             EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC
T ss_pred             CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC
Confidence            489999999887    5  67776 4678999999999999999999999999999999999999888766555565665


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-h-HHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-E-DFFCKLI  316 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~  316 (419)
                      ..+++++++|+||.++ +|+|+||+++++        ++++.+..... ...+++++.|.++..+++... . +++++.+
T Consensus       235 ~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  305 (407)
T 2zc0_A          235 NEGRVIVAGTLSKVLG-TGFRIGWIIAEG--------EILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGAL  305 (407)
T ss_dssp             SSCCEEEEEESTTTTC-TTSCCEEEECCH--------HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHH
T ss_pred             CCCCEEEEcccccccC-CCcceEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHH
Confidence            5567899999999987 999999999864        57777776543 345668888999988887642 3 4567788


Q ss_pred             HHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEE
Q 014769          317 DTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----LKNWLR  391 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~R  391 (419)
                      ++++++++.+.+.|++ +|++. +..|.+|+|+|++++..     .+..++...|++++||.+.||..|+    ..+++|
T Consensus       306 ~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iR  379 (407)
T 2zc0_A          306 LGYKEKRDIMLKALENHLPNAE-FTKPIAGMFVMFFLPEG-----ADGISFANELMEREGVVVVPGKPFYTDESGKNAIR  379 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSC-BCCCSBSSEEEEECSTT-----CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCE-EecCCCcEEEEEEcCCC-----CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEE
Confidence            8899999999999987 57777 44688899999998642     2567788888666699999998885    358999


Q ss_pred             EEeec-CHHHHHHHHHHHHHHHHHHhc
Q 014769          392 IAFCA-EPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       392 is~~~-~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      |+++. +++++++++++|+++++++.+
T Consensus       380 is~~~~~~~~i~~~~~~l~~~l~~~~~  406 (407)
T 2zc0_A          380 LNFSRPSKEEIPIGIKKLAKLYKEKFG  406 (407)
T ss_dssp             EECSSSCTTHHHHHHHHHHHHHHHHC-
T ss_pred             EEeCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            99975 789999999999999988765

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=4.3e-47  Score=365.56  Aligned_cols=359  Identities=22%  Similarity=0.355  Sum_probs=301.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK  117 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~  117 (419)
                      ..++|+|+.|.+.    ++.++.+.+++.+++...  ....|++..|..++|+++++++.+.+|.+++++ +|++|+|++
T Consensus        36 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~  111 (429)
T 1yiz_A           36 QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAY  111 (429)
T ss_dssp             HHCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHH
T ss_pred             cCCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChH
Confidence            3468999999863    456789999999988652  235798888999999999999988778778888 999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC--------CcccChHHHHHhhcCCccEEEEeCC
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER--------NWEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      +++..++++++++||+|+++.|+|+++...++..|.+++.++++++.        ++.+|++.|++++++++++|++++|
T Consensus       112 ~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p  191 (429)
T 1yiz_A          112 EALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTP  191 (429)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESS
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCC
Confidence            99999999999999999999999999999999999999999987543        5679999999999878899999999


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      +||||.++|.+++++|+++|+++|+++|+||+|..+.+++....++..+. ..++++++.|+||.++++|+|+||+++++
T Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~  271 (429)
T 1yiz_A          192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE  271 (429)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH
Confidence            99999999999999999999999999999999999988776555555443 34578999999999988999999999865


Q ss_pred             CCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcc-----cc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769          269 PNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEK-----TK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNK  341 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~-----~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  341 (419)
                              ++++.+.... ..+++.+++.|.++.++|+.     .. .+++++.+++++++++.+.+.|+++ ++. +..
T Consensus       272 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~  341 (429)
T 1yiz_A          272 --------ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN-PTV  341 (429)
T ss_dssp             --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEE
T ss_pred             --------HHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccC
Confidence                    5777776654 33567888899888888876     32 4678889999999999999999887 776 446


Q ss_pred             CCceEEEEeecCcccc-------cCCCCHHHHHHHHHHhcCeEeecCCCCCC-------CCeEEEEeecCHHHHHHHHHH
Q 014769          342 PEGSMVTMVKLNPWLL-------EDINDDIEFALKLAKEESVIVTPGIYVGL-------KNWLRIAFCAEPSALKDGLGR  407 (419)
Q Consensus       342 p~~g~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------~~~~Ris~~~~~~~l~~~l~~  407 (419)
                      |.+|+|+|++++....       ....+..+++.+|++++||.+.||..|+.       .+++||+++.++++|++++++
T Consensus       342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~  421 (429)
T 1yiz_A          342 PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEI  421 (429)
T ss_dssp             CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHH
T ss_pred             CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHH
Confidence            7889999999874210       00013567777787788999999988763       579999998899999999999


Q ss_pred             HHHHHH
Q 014769          408 MKAFCQ  413 (419)
Q Consensus       408 l~~~~~  413 (419)
                      |+++++
T Consensus       422 l~~~l~  427 (429)
T 1yiz_A          422 LRKWKG  427 (429)
T ss_dssp             HHHHSC
T ss_pred             HHHhcc
Confidence            998764

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=2.3e-47  Score=361.15  Aligned_cols=358  Identities=18%  Similarity=0.295  Sum_probs=294.9

Q ss_pred             chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhC
Q 014769           22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL  101 (419)
Q Consensus        22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~  101 (419)
                      +..++.+.. +.+.+.+ .+ ++|||+.|++.    ++.++.+.+++.+.+.  ....|+++.|..++|+++++++.+.+
T Consensus         6 ~~~~~~~~~-~~~~~~~-~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~   76 (376)
T 3ezs_A            6 PYPFERLRA-LLKEITP-KK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRF   76 (376)
T ss_dssp             CCHHHHHHH-HHTTCCC-SS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHH-HHHhhhc-cC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHh
Confidence            344555554 4443433 35 99999999853    5567899999988773  34589998899999999999999888


Q ss_pred             CCCCCCCcEEEcccHHHHHHHHHHHhcCC--CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC
Q 014769          102 PYKLSADDVYVTLGCKQAVEVILSVLARP--GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK  179 (419)
Q Consensus       102 ~~~~~~~~i~~t~g~~~al~~~~~~l~~~--gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~  179 (419)
                      |..+++++|++|+|+++++..++++++++  ||+|+++.|+|.++...++..|.+++.+++++++++.+   .+++++.+
T Consensus        77 g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~~~~~~  153 (376)
T 3ezs_A           77 KIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP---SLNEKELQ  153 (376)
T ss_dssp             SCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---CCCHHHHH
T ss_pred             CCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---hHHhhhcc
Confidence            88788999999999999999999999999  99999999999999999999999999999875544333   45555555


Q ss_pred             CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-----CCCcEEEEecCCCcC
Q 014769          180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-----SIVPVITLGSISKRW  254 (419)
Q Consensus       180 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~  254 (419)
                      +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++.....+...+     ..++++++.|+||.+
T Consensus       154 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  233 (376)
T 3ezs_A          154 EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRS  233 (376)
T ss_dssp             HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTT
T ss_pred             CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhcc
Confidence            789999999999999999999999999999999999999999999988763322222111     346789999999999


Q ss_pred             CCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      +++|+|+||++++.        ++++.+..... .+++++.+.+.++.++++.  .+++++.+++++++++.+.+.|+  
T Consensus       234 g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--  301 (376)
T 3ezs_A          234 SAPGLRSGFIAGDS--------RLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--  301 (376)
T ss_dssp             TCGGGCCEEEEECH--------HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--
T ss_pred             CCccceeEEEeeCH--------HHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--
Confidence            89999999999854        67788876643 3567889999999998886  46788889999999999999887  


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEEEEeecCHHHHHHHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----LKNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                       ++.   .|.+|+|+|++++        +..++..+|++++||.+.||..|+    ..+++||+++.+++++++++++|+
T Consensus       302 -~~~---~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~  369 (376)
T 3ezs_A          302 -NTL---IYPYSFYVYLPVQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIE  369 (376)
T ss_dssp             -TCC---CCSBSSEEEEECS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHH
T ss_pred             -CCC---CCCcceEEEEECC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHH
Confidence             343   6788999999886        467888888776899999999987    368999999779999999999999


Q ss_pred             HHHHHH
Q 014769          410 AFCQRH  415 (419)
Q Consensus       410 ~~~~~~  415 (419)
                      ++++++
T Consensus       370 ~~l~~~  375 (376)
T 3ezs_A          370 TYRENH  375 (376)
T ss_dssp             HHHCC-
T ss_pred             HHHHhc
Confidence            988654

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=4.1e-46  Score=351.72  Aligned_cols=363  Identities=26%  Similarity=0.426  Sum_probs=303.0

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +++....+.+.++.+.....+ .. ..++++|+|+.|.+.    ++.++.+.+++.+.+... ...|++..|..++|+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~l   75 (370)
T 2z61_A            3 SKRLLNFESFEVMDILALAQK-LE-SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKI   75 (370)
T ss_dssp             CHHHHHCCCCTTHHHHHHHHH-HH-HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred             hhhhhhccccHHHHHHHHHHH-HH-hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHH
Confidence            345566777788887765433 22 237889999999863    345789999999988764 34798888999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.++        +|+++|
T Consensus        76 a~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l  147 (370)
T 2z61_A           76 SELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESL  147 (370)
T ss_dssp             HHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHH
T ss_pred             HHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHH
Confidence            999998888888999999999999999999999999999999999999999999999999988776        589999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCC
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISK  252 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK  252 (419)
                      +++++++++++++++|+||||.++|.+    |.++|+++|+++|+||+|+.+.+++. ..++..+. ..++++++.|+||
T Consensus       148 ~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK  222 (370)
T 2z61_A          148 EEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSK  222 (370)
T ss_dssp             HHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTT
T ss_pred             HHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChh
Confidence            999987888999999999999999955    99999999999999999999888663 33444442 3457899999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      .++++|+|+||+++++        ++++.++.... .+++++.+.|.++.++|+....+++++.+++++++++.+.+.|+
T Consensus       223 ~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~  294 (370)
T 2z61_A          223 LYAMTGWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVK  294 (370)
T ss_dssp             TTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCccceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9988999999999865        57777776543 34578889999888888741156788889999999999999999


Q ss_pred             cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      ++ ++. +..|.+|+++|++++.       +..++..+|++++||.+.||..|+.  .+++|++++.+++++++++++|+
T Consensus       295 ~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~  365 (370)
T 2z61_A          295 DF-GWE-VNNPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIK  365 (370)
T ss_dssp             HT-TCB-CCCCCBTTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHH
T ss_pred             Hc-CCe-ecCCCcceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHH
Confidence            88 777 4478889999988863       4677888887678999999998874  68999999989999999999999


Q ss_pred             HHHH
Q 014769          410 AFCQ  413 (419)
Q Consensus       410 ~~~~  413 (419)
                      ++++
T Consensus       366 ~~l~  369 (370)
T 2z61_A          366 EFLN  369 (370)
T ss_dssp             HHHC
T ss_pred             HHHh
Confidence            8874

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=1.5e-46  Score=361.98  Aligned_cols=383  Identities=18%  Similarity=0.244  Sum_probs=299.7

Q ss_pred             cCchhhhhCCch-hHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC----CCCCCCCCCCCC
Q 014769           12 EDKQEHKAAPAV-TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----GKFNCYATNSGI   86 (419)
Q Consensus        12 ~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~~g~   86 (419)
                      ...++....+.. ....+.........+.+++++|+|+.|++.    ++.++.+.+++.+++..    .....|++..|.
T Consensus        25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~  100 (432)
T 3ei9_A           25 SRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGA  100 (432)
T ss_dssp             CCCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCC
T ss_pred             ccChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCC
Confidence            344555555553 555565555554445567899999999853    67889999999998763    223478888899


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCC------------E
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQV------------E  154 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~------------~  154 (419)
                      .++|+++++++.+  +.++++++|++|+|+++++..+ ..++++||.|++++|+|+++...+...|.            +
T Consensus       101 ~~l~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  177 (432)
T 3ei9_A          101 KPLRAAIAKTFYG--GLGIGDDDVFVSDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGN  177 (432)
T ss_dssp             HHHHHHHHHHHHT--TTTCCGGGEEEESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETT
T ss_pred             HHHHHHHHHHHHc--cCCCCcceEEECCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCc
Confidence            9999999999974  5567889999999999999975 77778999999999999999888887774            5


Q ss_pred             EEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769          155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP  234 (419)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  234 (419)
                      +..++++.+.++..+++.     .++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++.. .+
T Consensus       178 ~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~  251 (432)
T 3ei9_A          178 IEYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RS  251 (432)
T ss_dssp             CEEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SS
T ss_pred             eEEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CC
Confidence            777887655455555443     247889999999999999999999999999999999999999999998877543 23


Q ss_pred             ccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHH
Q 014769          235 MGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFF  312 (419)
Q Consensus       235 ~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~  312 (419)
                      +..+. ..+++++++|+||.|+++|+|+||++++++........+.+.+.... ...+++++++|.++.+++.....+++
T Consensus       252 ~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~  331 (432)
T 3ei9_A          252 IFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAM  331 (432)
T ss_dssp             GGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHH
T ss_pred             hhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHH
Confidence            33332 23568999999999999999999999976320000001255555543 23456788899988888864334678


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeE
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWL  390 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~  390 (419)
                      ++.+++++++++.+.+.|+++ ++. +..|.+++|+|+.++.      .+..+++..+++++||.+.||..|+.  .+++
T Consensus       332 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~i  403 (432)
T 3ei9_A          332 HKVIGFYKENTNIIIDTFTSL-GYD-VYGGKNAPYVWVHFPN------QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFV  403 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TCC-EEECSSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHC-Cce-ecCCCcceEEEEECCC------CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEE
Confidence            899999999999999999988 777 4466789999999873      25778888888888999999999875  6899


Q ss_pred             EEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          391 RIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       391 Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ||+++.++++|++++++|++--+.+
T Consensus       404 Ris~~~~~e~l~~~l~rl~~~~~~~  428 (432)
T 3ei9_A          404 RVSAFGHRENILEACRRFKQLYKHH  428 (432)
T ss_dssp             EEECCSCHHHHHHHHHHHHHHHTTS
T ss_pred             EEEecCCHHHHHHHHHHHHHHhhhc
Confidence            9999889999999999998765443

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=4.6e-47  Score=364.75  Aligned_cols=378  Identities=19%  Similarity=0.274  Sum_probs=306.1

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARR   91 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~   91 (419)
                      +++....+.+.++.++..       ..++++|||+.|.|..  ...+++.+.+++.+.+....  ...|+++.|..++|+
T Consensus        22 ~~~~~~~~~~~~~~~~~~-------~~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~   92 (425)
T 1vp4_A           22 SKIGQNMKSSIIREILKF-------AADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQ   92 (425)
T ss_dssp             CHHHHTCCCCCHHHHTTT-------TTSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHH
T ss_pred             hhhhhcCCCcHHHHHHHh-------ccCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHH
Confidence            444455555555554431       1256899999998753  23467889999988876431  347888889999999


Q ss_pred             HHHHHHHhhCCCC-CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccCh
Q 014769           92 AIADYLSRDLPYK-LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL  170 (419)
Q Consensus        92 ~ia~~l~~~~~~~-~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  170 (419)
                      ++++++.+.+|.. +++++|++|+|+++++..++++++++||+|++++|+|+++...+...|.+++.++++++   ++|+
T Consensus        93 ~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~  169 (425)
T 1vp4_A           93 QILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDL  169 (425)
T ss_dssp             HHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECH
T ss_pred             HHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCH
Confidence            9999997766766 78899999999999999999999999999999999999999999999999999987642   4899


Q ss_pred             HHHHHhhcC--------CccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          171 DAVEALADK--------NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       171 ~~l~~~~~~--------~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                      +.|++++++        ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++..
T Consensus       170 ~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~  249 (425)
T 1vp4_A          170 NVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGP  249 (425)
T ss_dssp             HHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCT
T ss_pred             HHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCC
Confidence            999988865        56777 478999999999999999999999999999999999999998876655555555545


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTL  319 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~  319 (419)
                      ++++++.|+||.++ +|+|+||+++++        ++++.+.... ..+++++.+.|.++..+|+... .+++++.++++
T Consensus       250 ~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  320 (425)
T 1vp4_A          250 ERVVLLNTFSKVLA-PGLRIGMVAGSK--------EFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELY  320 (425)
T ss_dssp             TTEEEEEESTTTTC-GGGCEEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHH
T ss_pred             CCEEEEeccccccc-cccceEEEeeCH--------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            67899999999988 999999999864        5777776654 2345678899999999998642 46788888999


Q ss_pred             HHHHHHHHHHhhc-CC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEE
Q 014769          320 RESAEICYDGVKE-IP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLR  391 (419)
Q Consensus       320 ~~~~~~l~~~l~~-~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~R  391 (419)
                      +++++.+.+.|++ +|   ++. +..|.+|+|+|++++..     .+..++...|+++ ||.+.||..|+.    .+++|
T Consensus       321 ~~~~~~l~~~L~~~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iR  393 (425)
T 1vp4_A          321 RRKRTVMLNALEEYFSDIPGVK-WVKSEGGLFIWLTLPEG-----FDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMR  393 (425)
T ss_dssp             HHHHHHHHHHHHHHSTTSTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEE
T ss_pred             HHHHHHHHHHHHHhCCCCCceE-EecCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEE
Confidence            9999999999987 45   576 44688899999998742     1345677777655 999999998853    57999


Q ss_pred             EEeec-CHHHHHHHHHHHHHHHHHHhccC
Q 014769          392 IAFCA-EPSALKDGLGRMKAFCQRHTKKH  419 (419)
Q Consensus       392 is~~~-~~~~l~~~l~~l~~~~~~~~~~~  419 (419)
                      |+++. +++++++++++|+++++++.+++
T Consensus       394 is~~~~~~e~i~~~l~~l~~~l~~~~~~~  422 (425)
T 1vp4_A          394 LSFCLPPDEKIVEGIKRLREVVLEYGKEK  422 (425)
T ss_dssp             EECSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence            99975 79999999999999998876653

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=5.3e-46  Score=353.56  Aligned_cols=351  Identities=19%  Similarity=0.309  Sum_probs=301.3

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|+|+.|++    .+++++.+.+++.+.+.... ..|++  +..++++++++++.+.+|..+++++|++|+|+++++
T Consensus        31 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~  103 (391)
T 4dq6_A           31 TNDLLPMWVADM----DFKAAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI  103 (391)
T ss_dssp             CSCSEECCSSSC----SSCCCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCceeccccCC----CCCCCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence            678999999984    46778999999999987543 35665  569999999999999888788899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc--CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL--PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      ..++.+++++||+|+++.|+|.++...++..|.+++.++++  .++++.+|++.+++++++ ++++++++|+||||.++|
T Consensus       104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~  182 (391)
T 4dq6_A          104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT  182 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence            99999999999999999999999999999999999999987  445678999999999987 889999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      .+++++|+++|+++|+++|+||+|+.+.+++....++..+..  .++++++.|+||.++++|+|+||++++++       
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-------  255 (391)
T 4dq6_A          183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE-------  255 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH-------
T ss_pred             HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCH-------
Confidence            999999999999999999999999999988766666666554  36789999999999899999999998652       


Q ss_pred             hHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecC
Q 014769          277 GIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLN  353 (419)
Q Consensus       277 ~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~  353 (419)
                      ++++.++....  ..++++.+.+.++..+++. ..+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~  333 (391)
T 4dq6_A          256 KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK-VRKPEGTYLLWVDFS  333 (391)
T ss_dssp             HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCSBSSEEEEECG
T ss_pred             HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCCccEEEEEEhh
Confidence            46677766532  2346788888888888875 3567888999999999999999987 78888 558889999999887


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      ...    .+..++...|++++||.+.||..|+.  .+++|++++.+++++++++++|++++
T Consensus       334 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          334 ALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI  390 (391)
T ss_dssp             GGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             hcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            421    25778888886666999999998876  48999999989999999999999876

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=5.3e-46  Score=353.50  Aligned_cols=353  Identities=20%  Similarity=0.260  Sum_probs=294.0

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHH-HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP-ARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +++|+|+.|++.    +++++.+.+++.+.+... ...|++.  ..+ +|+++++++.+.+|..+++++|++|+|+++++
T Consensus        28 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al  100 (390)
T 1d2f_A           28 ADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV  100 (390)
T ss_dssp             --CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred             CCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence            478999999853    567899999999988653 3478774  678 99999999998888778899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC-CcccChHHHHHhhcC-CccEEEEeCCCCccccCCC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~  198 (419)
                      +.++++++++||+|+++.|+|+++...++..|.+++.+++++++ +|.+|++.|++++++ ++++|++++|+||||.++|
T Consensus       101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~  180 (390)
T 1d2f_A          101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT  180 (390)
T ss_dssp             HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence            99999999999999999999999999999999999999886543 567999999999876 6888899999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      .+++++|+++|+++|+++|+||+|+.+.+++..+.++..+.....-. +.|+||.++++|+|+||++++++       ++
T Consensus       181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~-------~~  252 (390)
T 1d2f_A          181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENS-------SS  252 (390)
T ss_dssp             TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSH-------HH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCH-------HH
Confidence            99999999999999999999999999988776555555554321013 88999999889999999998642       46


Q ss_pred             HHHHHhhhc--cc-cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCc
Q 014769          279 IDSIKDCLS--IY-SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       279 ~~~l~~~~~--~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                      ++.++....  .. ++++.+.+.++..+++.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~  330 (390)
T 1d2f_A          253 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRP  330 (390)
T ss_dssp             HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGG
T ss_pred             HHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEccc
Confidence            677765543  23 377888888888888753 567888899999999999999998 78887 4478888999998864


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ..    .+..++...|++++||.+.||..|+  .++++||+++.+++++++++++|+++++++
T Consensus       331 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~  389 (390)
T 1d2f_A          331 LN----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAV  389 (390)
T ss_dssp             GC----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred             cC----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence            21    1467788888667899999999886  368999999888899999999999999875

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=1.3e-45  Score=352.84  Aligned_cols=378  Identities=22%  Similarity=0.296  Sum_probs=309.4

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +++....+++.++.+.....+ .. ..++++|+|+.|.+.    ++.++.+.+++ +.+... ...|++..|..++|+++
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~l   88 (409)
T 2gb3_A           17 SDRVLLTEESPIRKLVPFAEM-AK-KRGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAF   88 (409)
T ss_dssp             CHHHHSCCCCTTGGGHHHHHH-HH-HTTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHH
T ss_pred             HHHhhcCCccHHHHHHHHHHH-HH-hcCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHH
Confidence            445566667777777664433 22 237889999999863    44578899999 887653 34798888999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++++.+.+|.++++++|++|+|+++++..++.++.++||+|+++.|+|+++...+...|.+++.+++++++++.+ ++.|
T Consensus        89 a~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l  167 (409)
T 2gb3_A           89 ASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNL  167 (409)
T ss_dssp             HHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTG
T ss_pred             HHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHH
Confidence            999998888888899999999999999999999999999999999999999999999999999998865345555 8889


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR  253 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  253 (419)
                      +++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++.....+..+  .+++++++|+||.
T Consensus       168 ~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~  245 (409)
T 2gb3_A          168 ESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIE--SDKVVVIDSVSKK  245 (409)
T ss_dssp             GGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSC--CTTEEEEEESTTT
T ss_pred             HHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccC--CCCEEEEecchhc
Confidence            98888788999999999999999999999999999999999999999999988766322212111  3468999999999


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      ++++|+|+||++++++       ++++.++.......+++.+.+.++..+|+.. ..++++.+++++++++.+.+.|+++
T Consensus       246 ~g~~G~r~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~  317 (409)
T 2gb3_A          246 FSACGARVGCLITRNE-------ELISHAMKLAQGRLAPPLLEQIGSVGLLNLD-DSFFDFVRETYRERVETVLKKLEEH  317 (409)
T ss_dssp             TTCGGGCCEEEECSCH-------HHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCccceEEEEEECcH-------HHHHHHHHHHhccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            9889999999998641       3666666554321177888999998999653 5778888999999999999999988


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHh-----cCeEeecCCCCCC-----CCeEEEEeecCHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE-----ESVIVTPGIYVGL-----KNWLRIAFCAEPSALKD  403 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~  403 (419)
                       ++.++..|.+|+++|++++.      .+..++...|+++     +||.+.||..|+.     .+++|++++.+++++++
T Consensus       318 -g~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~  390 (409)
T 2gb3_A          318 -GLKRFTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSR  390 (409)
T ss_dssp             -TCCCBCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHH
T ss_pred             -CceeeeCCCeeEEEEEEeCC------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHH
Confidence             77741478889999998861      2567888888666     5999999988854     67999999999999999


Q ss_pred             HHHHHHHHHHHHhc
Q 014769          404 GLGRMKAFCQRHTK  417 (419)
Q Consensus       404 ~l~~l~~~~~~~~~  417 (419)
                      ++++|+++++++.+
T Consensus       391 ~~~~l~~~l~~~~~  404 (409)
T 2gb3_A          391 AIDVLMEGLKMFCS  404 (409)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhh
Confidence            99999999988754

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=2.2e-46  Score=359.38  Aligned_cols=385  Identities=15%  Similarity=0.146  Sum_probs=300.1

Q ss_pred             ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCH
Q 014769            9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP   87 (419)
Q Consensus         9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~   87 (419)
                      |+.-...+..+..++.+..++....+..++..+.++|+|+.|+|. ..+.+++++.+.+++.+.... ....|++..|.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~   83 (418)
T 3rq1_A            5 TSVAAKHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIP   83 (418)
T ss_dssp             CCCSCTTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCH
T ss_pred             hhhhHhhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChH
Confidence            344445555677788888888877665544457799999999872 123467888888887654322 234799889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE  167 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  167 (419)
                      ++|+++++++.+..+.. .+++|++|+|+++++..++++++++||+|+++.|+|..+...+...|.+++.+++++++ +.
T Consensus        84 ~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~  161 (418)
T 3rq1_A           84 DFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NN  161 (418)
T ss_dssp             HHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SS
T ss_pred             HHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CC
Confidence            99999999997654422 23399999999999999999999999999999999999999999999999999986543 68


Q ss_pred             cChHHHHHhhcC----Ccc-EEEEeCC-CCccccCCCHHHHHHHHHHHH------hCCCeEEEcccccccccCCCCCCCc
Q 014769          168 VDLDAVEALADK----NTA-AMVIINP-GNPCGNVFTYHHLQEIAEMAR------KLRVMVVADEVYGHLTFGSIPYTPM  235 (419)
Q Consensus       168 ~~~~~l~~~~~~----~~~-~v~i~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~~  235 (419)
                      +|++.+++++++    +++ ++++++| +||||.+++.+++++|+++|+      ++|+++|+||+|.++.+++....++
T Consensus       162 ~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~  241 (418)
T 3rq1_A          162 FNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF  241 (418)
T ss_dssp             BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred             cCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence            999999998874    555 6788899 999999999999999999999      8999999999999988765432222


Q ss_pred             c-ccCC-CCc--EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-----cccCCchHHHHHHHHHHcc
Q 014769          236 G-LFGS-IVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-----IYSDIPTFIQGAIPQILEK  306 (419)
Q Consensus       236 ~-~~~~-~~~--~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~l~~  306 (419)
                      . .... .++  +++++||||.++++|+|+||+++...     ++++++.+.....     .+.+++.++|.++..+++.
T Consensus       242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  316 (418)
T 3rq1_A          242 FNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISD-----DEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVAD  316 (418)
T ss_dssp             GGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEES-----SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTC
T ss_pred             HHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeC-----CHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCC
Confidence            2 2221 223  58899999999999999999998210     0157777765432     1245788899999888876


Q ss_pred             cc-----hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769          307 TK-----EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       307 ~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  381 (419)
                      ..     .+..++.+++++++++.+.+.|+++ ++. +..|.+++|+|++++        +..++... |.++||.+.||
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gi~v~~g  385 (418)
T 3rq1_A          317 PAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLP-MLPYRGGFFITIPTD--------SANAICEE-LKKEHIYVIAL  385 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCCCSSSEEEEECT--------THHHHHHH-HHHTTEECEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCCCceEEEEcCCC--------CHHHHHHH-HHhCCEEEecC
Confidence            32     1234466788899999999999887 777 458899999998774        46677765 47889999998


Q ss_pred             CCCCCCCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769          382 IYVGLKNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       382 ~~~~~~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                           .+++||+++ .+++++++++++|+++++++.+
T Consensus       386 -----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~  417 (418)
T 3rq1_A          386 -----ANGIRIAACGIPKCQMTGLAEKIYNAMKSLGK  417 (418)
T ss_dssp             -----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTTC
T ss_pred             -----CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence                 468999997 5999999999999999987643

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=6.3e-46  Score=358.33  Aligned_cols=371  Identities=18%  Similarity=0.185  Sum_probs=306.6

Q ss_pred             CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 014769           20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSR   99 (419)
Q Consensus        20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~   99 (419)
                      .....++.+.... ..+.+..++++|+|+.|.+.    +++++.+++++.+.+.......|++..|..++|+++++++.+
T Consensus        23 ~~~~~~~~~~~~~-~~~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~   97 (437)
T 3g0t_A           23 LGMASIRDLVALV-TNLEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKL   97 (437)
T ss_dssp             GGGCCHHHHHHHH-HHHHHHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHH-HHHHHhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHH
Confidence            3455566666543 33334458899999999863    567899999999988754436899988999999999999998


Q ss_pred             hCCCCCCCCcEEEcccHHHHHHHHHHHhc--CCCC--eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHH
Q 014769          100 DLPYKLSADDVYVTLGCKQAVEVILSVLA--RPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA  175 (419)
Q Consensus       100 ~~~~~~~~~~i~~t~g~~~al~~~~~~l~--~~gd--~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~  175 (419)
                      .+|..+++++|++|+|+++++..++.+++  ++||  +|++++|+|.++...++..|.+++.++++ ++++.+|++.+++
T Consensus        98 ~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~  176 (437)
T 3g0t_A           98 FVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLES  176 (437)
T ss_dssp             HHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHH
T ss_pred             hhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHH
Confidence            88888899999999999999999999998  9999  99999999999999999999999999986 4566789999999


Q ss_pred             hh-cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC----Cc-cccCC-CCcEEEEe
Q 014769          176 LA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT----PM-GLFGS-IVPVITLG  248 (419)
Q Consensus       176 ~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~----~~-~~~~~-~~~~i~~~  248 (419)
                      ++ +++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++....    ++ ..+.. .++++++.
T Consensus       177 ~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  256 (437)
T 3g0t_A          177 YLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILAL  256 (437)
T ss_dssp             HHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEE
T ss_pred             HHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEE
Confidence            99 66889999999999999999999999999999999999999999999887632211    11 33333 56789999


Q ss_pred             cCCCcCCCCCceeEEEEeeCCCCccchhhHHH-H-----------------HHhhh-ccccCCchHHHHHHHHHHcccch
Q 014769          249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIID-S-----------------IKDCL-SIYSDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       249 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~-----------------l~~~~-~~~~~~~~~~~~a~~~~l~~~~~  309 (419)
                      |+||.++++|+|+||+++++        ++++ .                 +.... ..+++++.+.+.++..+++.. .
T Consensus       257 s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~  327 (437)
T 3g0t_A          257 SSSKAFSYAGQRIGVLMISG--------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC-N  327 (437)
T ss_dssp             ESTTTTSCGGGCCEEEEECH--------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH-H
T ss_pred             cCccCCCCccceeEEEEECH--------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc-H
Confidence            99999988999999999865        4666 5                 55443 235678899999999988762 1


Q ss_pred             HH---HHHHHHHHHHHHHHHHHHhhcCCCCCCCC------CC-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769          310 DF---FCKLIDTLRESAEICYDGVKEIPCISCPN------KP-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT  379 (419)
Q Consensus       310 ~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~------~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  379 (419)
                      .+   +++.+++++++++.+.+.|+++ ++. +.      .| .+++|+|++++.      .+..++...|+ ++||.+.
T Consensus       328 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~gi~v~  398 (437)
T 3g0t_A          328 DGEYNFRDSVIEYGRKARIMKKMFLDN-GFN-IVYDKDGNEPLADGFYFTVGYKG------MDSSKLIEKFV-RYGMCAI  398 (437)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHHTT-TEE-ESSCEETTEECCSSSEEEEEETT------CCHHHHHHHHH-HTTEECE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHc-CCE-EeccccCCCCCceeEEEEEecCC------CCHHHHHHHHH-HcCeEEe
Confidence            22   8888999999999999999998 777 43      24 889999999872      25778887775 5699999


Q ss_pred             cCCCCCCC--CeEEEEeec-CHHHHHHHHHHHHHHHHH
Q 014769          380 PGIYVGLK--NWLRIAFCA-EPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       380 ~g~~~~~~--~~~Ris~~~-~~~~l~~~l~~l~~~~~~  414 (419)
                      |+..|+..  +++||+++. +++++++++++|++++++
T Consensus       399 ~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~  436 (437)
T 3g0t_A          399 TLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE  436 (437)
T ss_dssp             ESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred             eccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence            99988763  789999964 899999999999998764

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=4e-46  Score=357.73  Aligned_cols=353  Identities=17%  Similarity=0.265  Sum_probs=302.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ++++|+|+.|++    .++.+|.+.+++.+++.... ..|++.  ..++++++++++.+.++..+++++|++|+|+++++
T Consensus        60 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~  132 (421)
T 3l8a_A           60 NPELLQMWVADM----DFLPVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI  132 (421)
T ss_dssp             CTTCEECCSSCC----CSCCCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCeeecccCCC----CCCCCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence            678999999974    46788999999999887543 367664  38999999999999888888899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc-CCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~  198 (419)
                      +.++++++++||+|+++.|+|+++...+...|.+++.++++ .+.++.+|++.|+++++ ++++++++++|+||||.+++
T Consensus       133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~  212 (421)
T 3l8a_A          133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD  212 (421)
T ss_dssp             HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999986 45567899999999997 68899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      .+++++|.++|+++|+++|+||+|+++.+++....++..+..  .++++++.|+||.++++|+|+||++++++       
T Consensus       213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~-------  285 (421)
T 3l8a_A          213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE-------  285 (421)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH-------
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH-------
Confidence            999999999999999999999999999988876666666543  36789999999999889999999998742       


Q ss_pred             hHHHHHHhhh-c-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          277 GIIDSIKDCL-S-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       277 ~~~~~l~~~~-~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                      ++.+.+.... . ..++++++++.++.++++. ..+++++..++++++++.+.+.|+++|++. +..|.++++.|+.++.
T Consensus       286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~-~~~~~~~~~~~v~~~~  363 (421)
T 3l8a_A          286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIK-VMEPEGTYLVWLDFSA  363 (421)
T ss_dssp             HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCE-EECCSBSSEEEEECGG
T ss_pred             HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EeCCCeeEEEEEeccc
Confidence            5777776654 2 2347888999998888875 357789999999999999999998877888 4488999999999875


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      ..    .+..++...|++++||.+.||..|+.  .+++||+++.++++|++++++|+++++
T Consensus       364 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          364 YA----IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             GT----CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred             cC----CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence            21    14567888887788999999998875  689999999899999999999998875

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=5.9e-46  Score=353.97  Aligned_cols=375  Identities=20%  Similarity=0.276  Sum_probs=303.0

Q ss_pred             ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCC
Q 014769            9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGI   86 (419)
Q Consensus         9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~   86 (419)
                      |+...+++........++.+....       .++++|||+.|.|..  ...+++.+.+++.+++...  ....|+++.|.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~   76 (397)
T 2zyj_A            6 WSEAFGKGAGRIQASTIRELLKLT-------QRPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTEGY   76 (397)
T ss_dssp             HHHHSCGGGGGCCCCHHHHHHHHH-------TSTTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCC
T ss_pred             HHHHhhhhhcccCchHHHHHHhhc-------cCCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCC
Confidence            444455555555556666655421       156789999998753  2335788999988887542  13478887899


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW  166 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  166 (419)
                      .++|+++++++      ++++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.++++++   
T Consensus        77 ~~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---  147 (397)
T 2zyj_A           77 APLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---  147 (397)
T ss_dssp             HHHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---
T ss_pred             HHHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---
Confidence            99999999999      467889999999999999999999999999999999999999999999999999887542   


Q ss_pred             ccChHHHHHhhcC-CccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC---
Q 014769          167 EVDLDAVEALADK-NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI---  241 (419)
Q Consensus       167 ~~~~~~l~~~~~~-~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~---  241 (419)
                      ++|++++++++++ ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++.+   
T Consensus       148 ~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~  227 (397)
T 2zyj_A          148 GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGY  227 (397)
T ss_dssp             EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTC
T ss_pred             CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCC
Confidence            4899999998875 67877 468999999999999999999999999999999999999998876655555555544   


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLR  320 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  320 (419)
                      +++++++|+||.++ +|+|+||+++++        ++++.++... ...++.+.+.|.++..+|+....+++++.+++++
T Consensus       228 ~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  298 (397)
T 2zyj_A          228 PGVIYLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYR  298 (397)
T ss_dssp             CCEEEEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred             CeEEEEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            67899999999988 999999999864        5777776653 2345668889999999998632256888889999


Q ss_pred             HHHHHHHHHhhc-CC-CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEEEEe
Q 014769          321 ESAEICYDGVKE-IP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----LKNWLRIAF  394 (419)
Q Consensus       321 ~~~~~l~~~l~~-~~-~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~Ris~  394 (419)
                      ++++.+.+.|++ +| ++. +..|.+|+|+|++++..     .+..++...|++ +||.+.||..|+    .++++||++
T Consensus       299 ~~~~~l~~~L~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~g~~f~~~~~~~~~iRis~  371 (397)
T 2zyj_A          299 EKAQAMLHALDREVPKEVR-YTRPKGGMFVWMELPKG-----LSAEGLFRRALE-ENVAFVPGGPFFANGGGENTLRLSY  371 (397)
T ss_dssp             HHHHHHHHHHHHHSCTTSE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHH-TTEEEEESGGGCTTSCCTTEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCCeE-EccCCccEEEEEEcCCC-----CCHHHHHHHHHH-CCCEEechHHhcCCCCCCCeEEEEc
Confidence            999999999987 57 576 44788899999998742     246778877755 599999999885    358999999


Q ss_pred             ec-CHHHHHHHHHHHHHHHHHHhc
Q 014769          395 CA-EPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       395 ~~-~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +. +++++++++++|+++++++.+
T Consensus       372 ~~~~~~~i~~~~~~l~~~l~~~~~  395 (397)
T 2zyj_A          372 ATLDREGIAEGVRRLGRALKGLLA  395 (397)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            65 799999999999999988754

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=5.5e-46  Score=356.66  Aligned_cols=371  Identities=18%  Similarity=0.166  Sum_probs=294.6

Q ss_pred             cCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHH
Q 014769           12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP   88 (419)
Q Consensus        12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~   88 (419)
                      +..++....+++.|+.++..+.+    ...+++|||+.|   +|.  ...++++.+++++.+.+.......|++..|..+
T Consensus        23 ~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~   96 (420)
T 4f4e_A           23 SLFSAVELAPRDPILGLNEAFNA----DTRPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAA   96 (420)
T ss_dssp             CTTTTCCCCCCCHHHHHHHHHHH----CCCSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHH
T ss_pred             CHhhcCCcCCCChHHHHHHHHHh----cCCCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCCCcHH
Confidence            34556667788888888876543    335689999999   554  234566999999999988755568999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCC--cEEEcccHHHHHHHHH--HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC
Q 014769           89 ARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER  164 (419)
Q Consensus        89 lr~~ia~~l~~~~~~~~~~~--~i~~t~g~~~al~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~  164 (419)
                      +|+++++++....+..++++  +|++|+|+++++..++  ..++++||+|++++|+|.++...++..|.+++.+++..++
T Consensus        97 lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~  176 (420)
T 4f4e_A           97 YDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAK  176 (420)
T ss_dssp             HHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETT
T ss_pred             HHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccc
Confidence            99999999976544444678  8999999999999994  4567899999999999999999999999999999985445


Q ss_pred             CcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCCcccc-C
Q 014769          165 NWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLF-G  239 (419)
Q Consensus       165 ~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~  239 (419)
                      ++.+|++.+++.++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ +
T Consensus       177 ~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~  256 (420)
T 4f4e_A          177 TNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAA  256 (420)
T ss_dssp             TTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHH
T ss_pred             cCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHh
Confidence            67899999999987   5678888999999999999999999999999999999999999999988752 22233222 2


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH----HHHhhh-ccccCCchHHHHHHHHHHcccc-----h
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID----SIKDCL-SIYSDIPTFIQGAIPQILEKTK-----E  309 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~----~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~  309 (419)
                      ..+++++++|+||.|+++|+|+||+++....     +++++    .++... ..+.+++...|.++..++....     .
T Consensus       257 ~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  331 (420)
T 4f4e_A          257 ANLNVFVSSSFSKSFSLYGERVGALSIITDS-----KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWV  331 (420)
T ss_dssp             TTCCEEEEEECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHH
T ss_pred             cCCCEEEEEeCCccCcCcCCCcEEEEEEcCC-----HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHH
Confidence            3467899999999999999999999753211     13333    333322 2345567888888888887632     3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                      +++++++++++++++.+.+.|+++   +++. +..|++|+|+|+.++         . +.+..+++++||.+.|+.    
T Consensus       332 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gI~v~~~~----  396 (420)
T 4f4e_A          332 QELGEMRDRIRAMRNGLVERLKAAGIERDFS-FINAQRGMFSYSGLT---------S-AQVDRLREEFGIYAVSTG----  396 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHSCSSEEECCCC---------H-HHHHHHHHHHCEECCTTS----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCce-eECCCccEEEEeCCC---------H-HHHHHHHHhCCEEecCCC----
Confidence            567888999999999999999986   3666 447889999998763         2 345667788999999863    


Q ss_pred             CCeEEEEeec-CHHHHHHHHHHHHHHH
Q 014769          387 KNWLRIAFCA-EPSALKDGLGRMKAFC  412 (419)
Q Consensus       387 ~~~~Ris~~~-~~~~l~~~l~~l~~~~  412 (419)
                          |++++. +++++++++++|++++
T Consensus       397 ----Ris~~~~~~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          397 ----RICVAALNTRNLDVVANAIAAVL  419 (420)
T ss_dssp             ----EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             ----eEEEecCCHHHHHHHHHHHHHHh
Confidence                999964 7888999999999876

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=3.9e-45  Score=346.44  Aligned_cols=361  Identities=27%  Similarity=0.418  Sum_probs=290.8

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      ++........++.+.. +..      .+++|+|+.|.|.    ++.++.+.+++.+++..  ...|+++.|..++|++++
T Consensus         5 ~~~~~~~~~~~~~~~~-~~~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la   71 (381)
T 1v2d_A            5 PRTEAAKESIFPRMSG-LAQ------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALA   71 (381)
T ss_dssp             GGGGGC---CHHHHHH-HHH------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHH
T ss_pred             hhhhhcCccHHHHHHH-HHh------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHH
Confidence            3444444444544443 222      2468999999863    45689999999998865  457998889999999999


Q ss_pred             HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc--CCCCcccChHH
Q 014769           95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL--PERNWEVDLDA  172 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~  172 (419)
                      +++      ++++++|++|+|+++++..++.++.++||+|++++|+|+++...++..|.+++.++++  ++ ++.+|++.
T Consensus        72 ~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~  144 (381)
T 1v2d_A           72 EEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSA  144 (381)
T ss_dssp             HHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHH
T ss_pred             Hhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHH
Confidence            997      6778899999999999999999999999999999999999999999999999999875  22 46799999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      ++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+ +....++..+ ..+.++++.|+||
T Consensus       145 l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~sK  222 (381)
T 1v2d_A          145 LEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAGK  222 (381)
T ss_dssp             HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHHH
T ss_pred             HHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeechh
Confidence            9999988889999999999999999999999999999999999999999999877 4333344333 3457899999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      .++++|+|+||+++++        ++++.++.... .+++++.+.|.++..+|+... .+++++.+++++++++.+.+.|
T Consensus       223 ~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L  294 (381)
T 1v2d_A          223 RLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGL  294 (381)
T ss_dssp             HTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9988999999999865        45666655432 356778888988888887532 4678888999999999999999


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLG  406 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~  406 (419)
                      ++. ++. +..|.+|+|+|++++..      +    +..+++++||.+.||..|+.    .+++||+++.++++++++++
T Consensus       295 ~~~-g~~-~~~~~~~~~~~~~~~~~------~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~  362 (381)
T 1v2d_A          295 RAM-GLR-VYVPEGTYFLMAELPGW------D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALE  362 (381)
T ss_dssp             HHT-TCC-EECCSBSSEEEEECTTC------C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHH
T ss_pred             HHC-CCE-ecCCCcceEEEEecChH------h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHH
Confidence            986 777 44777889999988641      2    55667889999999998864    67999999879999999999


Q ss_pred             HHHHHHHHHhc
Q 014769          407 RMKAFCQRHTK  417 (419)
Q Consensus       407 ~l~~~~~~~~~  417 (419)
                      +|++++++.++
T Consensus       363 ~l~~~l~~~r~  373 (381)
T 1v2d_A          363 RLGRVVNSPRE  373 (381)
T ss_dssp             HHHHHC-----
T ss_pred             HHHHHHhhccc
Confidence            99999877643

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=6.5e-45  Score=350.90  Aligned_cols=361  Identities=19%  Similarity=0.339  Sum_probs=291.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-----------CCCCCCCCCCHHHHHHHHHHHHhhCC--CCCCC
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-----------FNCYATNSGIPPARRAIADYLSRDLP--YKLSA  107 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~  107 (419)
                      ...+|+|+.+..     ...++.+.+++.+......           ...|++..|..++|+++++++.+.++  ..+++
T Consensus        37 p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~  111 (435)
T 3piu_A           37 TNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP  111 (435)
T ss_dssp             TTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG
T ss_pred             CCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH
Confidence            345788888642     2347778787776543211           14699999999999999999986544  45778


Q ss_pred             CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCcccChHHHHHhhcC------C
Q 014769          108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALADK------N  180 (419)
Q Consensus       108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~  180 (419)
                      ++|++|+|+++++..++.+++++||.|+++.|+|.++...+. ..|.+++.++++++.++.+|++.|++++++      +
T Consensus       112 ~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  191 (435)
T 3piu_A          112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR  191 (435)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred             HHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999888777 789999999987766788999999998875      6


Q ss_pred             ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC----------CCcEEEEecC
Q 014769          181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS----------IVPVITLGSI  250 (419)
Q Consensus       181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~s~  250 (419)
                      +++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.|++..+.++..+..          .++++++.|+
T Consensus       192 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~  271 (435)
T 3piu_A          192 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL  271 (435)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred             eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence            788999999999999999999999999999999999999999998887765555433322          4578999999


Q ss_pred             CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~  328 (419)
                      ||.++++|+|+||++++++       ++.+.++.... .+..+++.+.++..++....  .+++++.+++++++++.+.+
T Consensus       272 sK~~g~~G~r~G~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  343 (435)
T 3piu_A          272 SKDLGLPGFRVGAIYSNDD-------MVVAAATKMSS-FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVS  343 (435)
T ss_dssp             SSSSCCGGGCEEEEEESCH-------HHHHHHHHHGG-GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecccCCCceeEEEEEeCCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999899999999998652       46666665444 35668888888888887632  34667888999999999999


Q ss_pred             HhhcCCCCCCCCCCCceEEEEeecCcccccC-CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeec-CHHHHHHH
Q 014769          329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLED-INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCA-EPSALKDG  404 (419)
Q Consensus       329 ~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~-~~~~l~~~  404 (419)
                      .|+++ ++. +..+.+|+|+|+.++...... ..+..+++.++++++||.+.||..|+.  ++++||+++. ++++++++
T Consensus       344 ~L~~~-g~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~  421 (435)
T 3piu_A          344 GLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLA  421 (435)
T ss_dssp             HHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHH
T ss_pred             HHHhc-CCc-ccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHH
Confidence            99987 777 447888899999987521000 002457778887777999999998864  6899999975 89999999


Q ss_pred             HHHHHHHHHHHh
Q 014769          405 LGRMKAFCQRHT  416 (419)
Q Consensus       405 l~~l~~~~~~~~  416 (419)
                      +++|+++++++.
T Consensus       422 l~~l~~~l~~~~  433 (435)
T 3piu_A          422 MQRLKAFVGEYY  433 (435)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHh
Confidence            999999998764

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=3.1e-45  Score=349.28  Aligned_cols=381  Identities=17%  Similarity=0.208  Sum_probs=282.5

Q ss_pred             chhhhhCCc-hhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHH
Q 014769           14 KQEHKAAPA-VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPP   88 (419)
Q Consensus        14 ~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~   88 (419)
                      .++..+... .....+...+.....+..++++|+|+.|++.    +++++.+.+++.+++...    ....|++..|..+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~   79 (400)
T 3asa_A            4 NPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPA   79 (400)
T ss_dssp             CHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHH
T ss_pred             chhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHH
Confidence            344444433 2344454444433334457889999999853    456788999988877531    2357988789999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCE-EEEEeccCCCCcc
Q 014769           89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPERNWE  167 (419)
Q Consensus        89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~  167 (419)
                      +|+++++++.  +|. +++++|++|+|+++++..++.. ..+||+|++++|+|+++...+...|.+ +..+++++++++.
T Consensus        80 lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  155 (400)
T 3asa_A           80 LRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFF  155 (400)
T ss_dssp             HHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTC
T ss_pred             HHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcc
Confidence            9999999974  343 6789999999999999997654 478999999999999999889999998 8888876544444


Q ss_pred             cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEE
Q 014769          168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVIT  246 (419)
Q Consensus       168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~  246 (419)
                      .+++.    . +++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..++. .+++++
T Consensus       156 ~~l~~----~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (400)
T 3asa_A          156 PEFPE----D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE  230 (400)
T ss_dssp             CCCCT----T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEE
T ss_pred             cChhh----c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEE
Confidence            45432    1 46889999999999999999999999999999999999999999988776543344544442 346899


Q ss_pred             EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh-hh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-CL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE  324 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  324 (419)
                      ++|+||.++++|+|+||++++++-....... ++.+.. .. ...++++.+.|.++..+++..   ++++.+++++++++
T Consensus       231 ~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~  306 (400)
T 3asa_A          231 INSFSKPLGFAGIRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSD  306 (400)
T ss_dssp             EEECCGGGTTTTCCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHH
T ss_pred             EecchhhcCCcchheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHH
Confidence            9999999989999999999865210000000 233321 11 223468889999998888763   56778888999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCceEEEEee-cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHH
Q 014769          325 ICYDGVKEIPCISCPNKPEGSMVTMVK-LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSAL  401 (419)
Q Consensus       325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l  401 (419)
                      .+.+.|+++ ++. +..|.+|+|+|++ ++..     .+..++..++++++||.+.||..|+.  ++++||++..+++++
T Consensus       307 ~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i  379 (400)
T 3asa_A          307 LLRKALLAT-GFE-VFGGEHAPYLWVKPTQAN-----ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDI  379 (400)
T ss_dssp             HHHHHHHHT-TCE-EEECSSSSEEEEECCCTT-----CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHH
T ss_pred             HHHHHHHHC-CCe-eeCCCCceEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHH
Confidence            999999887 776 4466788999999 7632     13456777887778999999998863  679999987789999


Q ss_pred             HHHHHHHHHHHHHHhcc
Q 014769          402 KDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       402 ~~~l~~l~~~~~~~~~~  418 (419)
                      ++++++|+++++++...
T Consensus       380 ~~~l~~l~~~~~~~~~~  396 (400)
T 3asa_A          380 LAACERLQMAPALQSHH  396 (400)
T ss_dssp             HHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHhhhhc
Confidence            99999999999876543

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=2e-44  Score=339.34  Aligned_cols=333  Identities=18%  Similarity=0.240  Sum_probs=282.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +.+++|+|+.|.+    .+++++.+++++.+.+..  ...|++ .+..++|+++++++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a   96 (363)
T 3ffh_A           30 GLTKITKLSSNEN----PLGTSKKVAAIQANSSVE--TEIYPD-GWASSLRKEVADFY------QLEEEELIFTAGVDEL   96 (363)
T ss_dssp             TCSCCEECSSCSC----TTCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred             CCCceEEccCCCC----CCCCCHHHHHHHHHHHHH--hhcCCC-cchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence            3578999999975    356789999999886643  446754 68999999999999      5778999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ++.+++++.++||+|+++.|+|..+...++..|.+++.+++++  ++.+|++.++++++++++++++++|+||||.++|.
T Consensus        97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~  174 (363)
T 3ffh_A           97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL  174 (363)
T ss_dssp             HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence            9999999999999999999999999999999999999999864  56899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++.+|++.|++ |+++|+|++|+++.+ +............++++++.|+||.++++|+|+||++++.        +++
T Consensus       175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~  244 (363)
T 3ffh_A          175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--------EII  244 (363)
T ss_dssp             HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--------HHH
T ss_pred             HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--------HHH
Confidence            998888888887 999999999998877 4433344444456689999999999989999999999954        678


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... +++++.+.+.++..+++.  .+++++.+++++++++.+.+.|++++++. + .|..|.|+|++++.     
T Consensus       245 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~~-----  314 (363)
T 3ffh_A          245 RQLNIVRP-PFNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPANGNFVLIDLGI-----  314 (363)
T ss_dssp             HHHHHTCC-SCCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCCCSSEEEEECSS-----
T ss_pred             HHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCCCCeEEEEECCC-----
Confidence            88877655 567899999999999985  47888999999999999999999866887 4 35556788998863     


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                        +..++...|. ++||.+.||..|+.++++|++++ ++++++++++.|+++
T Consensus       315 --~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          315 --EAGTIFSYLE-KNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL  362 (363)
T ss_dssp             --CHHHHHHHHH-HTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHH-HCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence              4677777774 57999999999988999999998 789999999999875

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=7.4e-46  Score=357.01  Aligned_cols=349  Identities=18%  Similarity=0.231  Sum_probs=286.0

Q ss_pred             CCCeeeccCCCC-CCCCCCCChHHH--HHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCc---EEEcc
Q 014769           41 PRPVVPLGYGDP-TAFPCFRTAVEA--EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD---VYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~-~~~~~~~~~~~v--~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~---i~~t~  114 (419)
                      .+++|||+.|+| .    ++.++.+  .+++.+.+.......|+++.|..++|+++++++.+.. .++++++   |++|+
T Consensus        46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~  120 (430)
T 2x5f_A           46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN  120 (430)
T ss_dssp             TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred             CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence            457899999987 4    2334444  5555555433134589988899999999999998764 6778889   99999


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh-cCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCC
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPG  190 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~  190 (419)
                      |++++++.++++++++||+|++++|+|+++...+.. .|.+++.+++++++ +.+|++.+++++++   +++++++++|+
T Consensus       121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~  199 (430)
T 2x5f_A          121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPN  199 (430)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred             CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence            999999999999999999999999999999999998 99999999886543 67999999998876   77889999999


Q ss_pred             CccccCCCHHHHHHHHHHHHh-----CCCeEEEcccccccccCCCCCCCcc-ccCC-CCc---EEEEecCCCcCCCCCce
Q 014769          191 NPCGNVFTYHHLQEIAEMARK-----LRVMVVADEVYGHLTFGSIPYTPMG-LFGS-IVP---VITLGSISKRWLVPGWR  260 (419)
Q Consensus       191 nptG~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~~-~~~~-~~~---~i~~~s~sK~~~~~G~r  260 (419)
                      ||||.++|.+++++|+++|++     +|+++|+||+|+.+.+++....++. .+.. .++   +++++|+||.++++|+|
T Consensus       200 nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  279 (430)
T 2x5f_A          200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFR  279 (430)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGC
T ss_pred             CCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCC
Confidence            999999999999999999999     9999999999999988765444443 3322 456   89999999999889999


Q ss_pred             eEEEEe---eCCCCccchhhHHHHHHhhhc-----cccCCchHHHHHHHHHHc-ccc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769          261 FGWLVT---NDPNGIFQKSGIIDSIKDCLS-----IYSDIPTFIQGAIPQILE-KTK-EDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       261 ~G~~~~---~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~l~-~~~-~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      +||+++   ++        ++++.+.....     .+++++.+.|.++.++|+ ... .+.+++.+++++++++.+.+.|
T Consensus       280 iG~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L  351 (430)
T 2x5f_A          280 VGFMTFGTSDQ--------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVV  351 (430)
T ss_dssp             CEEEEEBCCCH--------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCH--------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998   43        57777765432     356789999999999998 631 2233448899999999999999


Q ss_pred             h----cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-cCHHHHHHHH
Q 014769          331 K----EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-AEPSALKDGL  405 (419)
Q Consensus       331 ~----~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-~~~~~l~~~l  405 (419)
                      +    ++ ++. +..|.+|+|+|++++.      .+..++...|++++||.+.||    ..+++||+++ .+++++++++
T Consensus       352 ~~~~~~~-g~~-~~~~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~  419 (430)
T 2x5f_A          352 YADQYHS-HWQ-AYDFNSGYFMAIKVHD------VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVF  419 (430)
T ss_dssp             TCGGGTT-TEE-ECCCCBSSEEEEEESS------SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHH
T ss_pred             HhhCCCC-Cce-eeCCCceEEEEeCCCC------CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHH
Confidence            8    44 666 4478889999999871      256788888866589999998    3679999997 8889999999


Q ss_pred             HHHHHHHHHH
Q 014769          406 GRMKAFCQRH  415 (419)
Q Consensus       406 ~~l~~~~~~~  415 (419)
                      ++|+++++++
T Consensus       420 ~~l~~~l~~~  429 (430)
T 2x5f_A          420 DSIAKAIDDL  429 (430)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9999999865

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=2e-44  Score=346.76  Aligned_cols=358  Identities=20%  Similarity=0.357  Sum_probs=285.5

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC----------CCCCCCCCCCCCHHHHHHHHHHHHhhCCCC--CCCCc
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----------GKFNCYATNSGIPPARRAIADYLSRDLPYK--LSADD  109 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~--~~~~~  109 (419)
                      ..+|+|+.+...    ++ ++.+.+++.+....          .....|+++.|..++|+++++++.+.+|..  +++++
T Consensus        36 ~~~i~l~~~~~~----~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~  110 (428)
T 1iay_A           36 NGVIQMGLAENQ----LC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER  110 (428)
T ss_dssp             TSBEECSSCCCC----SS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred             Cceeeeccccch----hh-HHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence            468999977531    23 45777777743210          013579988899999999999998877755  77899


Q ss_pred             EEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH-hhcCCEEEEEeccCCCCcccChHHHHHhhcC------Ccc
Q 014769          110 VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA-QRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTA  182 (419)
Q Consensus       110 i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~  182 (419)
                      |++|+|+++++..++++++++||+|+++.|+|.++...+ ...|.+++.++++.++++.+|++.+++++++      +++
T Consensus       111 i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~  190 (428)
T 1iay_A          111 VVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVK  190 (428)
T ss_dssp             CEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred             EEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceE
Confidence            999999999999999999999999999999999987644 4679999999886555678899999988753      578


Q ss_pred             EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--------CCcEEEEecCCCcC
Q 014769          183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--------IVPVITLGSISKRW  254 (419)
Q Consensus       183 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~sK~~  254 (419)
                      +|++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++..+.++..+..        .++++++.|+||.+
T Consensus       191 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~  270 (428)
T 1iay_A          191 GLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM  270 (428)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS
T ss_pred             EEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc
Confidence            8999999999999999999999999999999999999999998876654444433322        35789999999999


Q ss_pred             CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      +++|+|+||++++++       ++++.++.... .++.+.++|.++..+++...  .+++++.+++++++++.+.+.|++
T Consensus       271 g~~Glr~G~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  342 (428)
T 1iay_A          271 GLPGFRVGIIYSFND-------DVVNCARKMSS-FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV  342 (428)
T ss_dssp             SCGGGCEEEEEESCH-------HHHHHHHHHHT-TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEEeCCH-------HHHHHHHHHHh-cccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            899999999998542       57777765543 35678899999999887632  246788889999999999999998


Q ss_pred             CCCCCCCCCCCceEEEEeecCcccccC-CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-cCHHHHHHHHHHH
Q 014769          333 IPCISCPNKPEGSMVTMVKLNPWLLED-INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-AEPSALKDGLGRM  408 (419)
Q Consensus       333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-~~~~~l~~~l~~l  408 (419)
                      + ++. +..+.+|+|+|++++...... ..+..++...|++++||.+.||..|+.  ++++||+++ .+++++++++++|
T Consensus       343 ~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l  420 (428)
T 1iay_A          343 V-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARI  420 (428)
T ss_dssp             T-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHH
T ss_pred             c-CCc-ccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence            8 777 446668999999986421000 002346777776667999999988865  579999997 7899999999999


Q ss_pred             HHHHHH
Q 014769          409 KAFCQR  414 (419)
Q Consensus       409 ~~~~~~  414 (419)
                      ++++++
T Consensus       421 ~~~l~~  426 (428)
T 1iay_A          421 RRFVGV  426 (428)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999865

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=2.8e-45  Score=349.82  Aligned_cols=375  Identities=15%  Similarity=0.108  Sum_probs=288.5

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA   92 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   92 (419)
                      .+.+...+++.+..++.....    ...+++|+|+.|.| ...+..+..+.+.+++.+.+.......|++..|.+++|++
T Consensus         4 ~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   79 (401)
T 7aat_A            4 WSHVEMGPPDPILGVTEAFKR----DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRA   79 (401)
T ss_dssp             STTCCCCCCCHHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHH
T ss_pred             hhcCCCCCCChhHHHHHHHhh----CCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHH
Confidence            344556667778777765543    34567999999987 4333334567888988887764345589998999999999


Q ss_pred             HHHHHHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhc---CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769           93 IADYLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLA---RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE  167 (419)
Q Consensus        93 ia~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  167 (419)
                      +++++.+.+|..+++++|++  |+|++++++.++.++.   ++||+|++++|+|..+...++..|.+++.++++...++.
T Consensus        80 ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  159 (401)
T 7aat_A           80 SAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS  159 (401)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTE
T ss_pred             HHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCc
Confidence            99999887777778999987  9999999999887765   899999999999999999999999999999986555678


Q ss_pred             cChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CCCCcccc-CCC
Q 014769          168 VDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLF-GSI  241 (419)
Q Consensus       168 ~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~  241 (419)
                      +|++.+++.+.   ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++.  ...++..+ ...
T Consensus       160 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  239 (401)
T 7aat_A          160 LDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG  239 (401)
T ss_dssp             ECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             cCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC
Confidence            99997776664   4678889999999999999999999999999999999999999999887653  12222221 334


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCKL  315 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~  315 (419)
                      +++++++|+||.|+++|+|+||++++....... ..+...++... ..+.+++...|.++..++....     .+++++.
T Consensus       240 ~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  318 (401)
T 7aat_A          240 IDVVLSQSYAKNMGLYGERAGAFTVICRDAEEA-KRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGM  318 (401)
T ss_dssp             CCCEEEEECTTTSCCGGGCEEEEEEECSSHHHH-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCcccccccCceEEEEEEeCCHHHH-HHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            578999999999999999999998743211000 01344444432 2345566777877777776521     3457778


Q ss_pred             HHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEE
Q 014769          316 IDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRI  392 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ri  392 (419)
                      +++++++++.+.+.|+++   +++. +..|++|+|+|+.++          .+++..+++++||.+.|+        +|+
T Consensus       319 ~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~Ri  379 (401)
T 7aat_A          319 ADRIISMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GRI  379 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------CeE
Confidence            889999999999999876   2355 446889999997653          344577778899999875        599


Q ss_pred             Eee-cCHHHHHHHHHHHHHHH
Q 014769          393 AFC-AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       393 s~~-~~~~~l~~~l~~l~~~~  412 (419)
                      +++ .++++|+++++.|++++
T Consensus       380 s~~~~~~~~i~~~~~~l~~~~  400 (401)
T 7aat_A          380 SVAGVASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             EGGGCCTTTHHHHHHHHHHHH
T ss_pred             EeccCChhhHHHHHHHHHHHh
Confidence            995 56677999999999875

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=1.3e-44  Score=339.47  Aligned_cols=337  Identities=17%  Similarity=0.258  Sum_probs=287.1

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ...++++|+|+.|.+    .+++++.+++++.+.+..  ...|+. .+..++|+++++++      ++++++|++|+|++
T Consensus        12 ~~~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~   78 (354)
T 3ly1_A           12 APSTDNPIRINFNEN----PLGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSS   78 (354)
T ss_dssp             CCCSSSCEECSSCCC----SSCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHH
T ss_pred             CCCCCceEEccCCCC----CCCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChH
Confidence            345889999999974    357889999999988864  457754 58899999999998      57789999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeCCCCcccc
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIINPGNPCGN  195 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~  195 (419)
                      +++..++.+++++||+|+++.|+|.++...++..|.+++.+++++  ++.+|++.++++++  ++++++++++|+||||.
T Consensus        79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~  156 (354)
T 3ly1_A           79 EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGT  156 (354)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCC
T ss_pred             HHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCC
Confidence            999999999999999999999999999999999999999998753  47899999999998  78999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC-CcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769          196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ  274 (419)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  274 (419)
                      ++|.+++.+|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.++++|+|+||++++.      
T Consensus       157 ~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------  229 (354)
T 3ly1_A          157 ITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP------  229 (354)
T ss_dssp             CCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH------
T ss_pred             CcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH------
Confidence            99999999999999 8999999999999988776544444333444 678999999999988999999999854      


Q ss_pred             hhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769          275 KSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP  354 (419)
Q Consensus       275 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~  354 (419)
                        ++++.++..... ++++.+.+.++..+++.  .+++++.+++++++++.+.+.|+++ ++. + .+..|+|+|++++.
T Consensus       230 --~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~~~~~~~~~~~~  301 (354)
T 3ly1_A          230 --TVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPSEGNFVFHQLVV  301 (354)
T ss_dssp             --HHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECSS
T ss_pred             --HHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCCceEEEEECCC
Confidence              688888776553 68899999999999986  4788899999999999999999987 776 4 35567788998863


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                             +..++...| .++||.+. |..++.++++||+++ ++++++++++.|++++++
T Consensus       302 -------~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          302 -------PLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             -------CHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred             -------CHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence                   466777776 46799998 776667899999998 688999999999998875

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.8e-44  Score=339.84  Aligned_cols=333  Identities=16%  Similarity=0.189  Sum_probs=281.9

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      .+++|+|+.|.+.    +++++.+++++.+.+..  ...|+++.+ .++|+++++++      ++++++|++|+|+++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~   95 (365)
T 3get_A           29 VKEVIKLASNENP----FGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI   95 (365)
T ss_dssp             CSCCEECSSCCCT----TCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            4789999999753    56889999999998863  457887666 99999999998      56789999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      +.++.+++++||+|+++.|+|..+...++..|.+++.+++ ...++ +|++++++++++++++|++++|+||||.++|.+
T Consensus        96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~  173 (365)
T 3get_A           96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS  173 (365)
T ss_dssp             HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence            9999999999999999999999999999999999999887 34567 999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEccccccccc--CCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      ++.+|+++| ++|+++|+|++|+.+.+  .+....+ ....+..+++++++|+||.++++|+|+||++++.        +
T Consensus       174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~  244 (365)
T 3get_A          174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA--------N  244 (365)
T ss_dssp             HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH--------H
T ss_pred             HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH--------H
Confidence            999999988 57999999999998875  4322222 2223344578999999999999999999999854        6


Q ss_pred             HHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       278 ~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      +++.++.... .++++.+.+.++..+++.  .+++++.+++++++++.+.+.|+++ ++. + .+..|.|+|++++..  
T Consensus       245 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~~~~~~~~~~~--  316 (365)
T 3get_A          245 IISAFYKLRA-PFNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDSYTNFITYFFDEK--  316 (365)
T ss_dssp             HHHHHHHHSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECSSS--
T ss_pred             HHHHHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCCC--
Confidence            7788876654 356899999999999986  4788999999999999999999988 776 4 345566789988742  


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                          +..++...| .++||.+.||..|+ ++++|++++ ++++++++++.|++++
T Consensus       317 ----~~~~~~~~l-~~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          317 ----NSTDLSEKL-LKKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             ----CHHHHHHHH-HTTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHH-HHCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence                467777777 55799999999998 899999998 7889999999998876

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=7.7e-45  Score=346.28  Aligned_cols=364  Identities=16%  Similarity=0.133  Sum_probs=286.9

Q ss_pred             hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHH-HHhCCCCCCCCCCCCCHHHHHHH
Q 014769           18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVD-AVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      ...+.+.+..+...+.    +...+++|||+.|   +|.  ...+.++.+++++.+ .+.......|++..|..++|+++
T Consensus         6 ~~~~~~~~~~~~~~~~----~~~~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l   79 (397)
T 3fsl_A            6 DAYAGDPILTLMERFK----EDPRSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAI   79 (397)
T ss_dssp             CCCCCCHHHHHHHHHH----TCCCSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHH
T ss_pred             CCCCCCchhhHHHHHh----cCCCCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHH
Confidence            3455667777766543    3446789999999   443  234566999999999 88765556899989999999999


Q ss_pred             HHHHHhhCCCCCCCC--cEEEcccHHHHHHHHH--HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccC
Q 014769           94 ADYLSRDLPYKLSAD--DVYVTLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVD  169 (419)
Q Consensus        94 a~~l~~~~~~~~~~~--~i~~t~g~~~al~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  169 (419)
                      ++++....+..++++  +|++|+|++++++.++  ..+.++||+|++++|+|.++...++..|.+++.+++.+++++.+|
T Consensus        80 a~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  159 (397)
T 3fsl_A           80 APLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVR  159 (397)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEEC
T ss_pred             HHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCc
Confidence            999976544444788  8999999999999995  455789999999999999999999999999999988555577899


Q ss_pred             hHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCCcccc-CCCCcE
Q 014769          170 LDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLF-GSIVPV  244 (419)
Q Consensus       170 ~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~~~  244 (419)
                      ++.++++++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+ +..+++
T Consensus       160 ~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (397)
T 3fsl_A          160 FNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPA  239 (397)
T ss_dssp             HHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCE
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCE
Confidence            999999987   4667888899999999999999999999999999999999999999888632 22233332 344678


Q ss_pred             EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH----Hhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHH
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI----KDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCK  314 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l----~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~  314 (419)
                      ++++|+||.++++|+|+||++++...     +++++.+    +... ..+.+++..+|.++..++....     .+++++
T Consensus       240 i~~~S~SK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  314 (397)
T 3fsl_A          240 LVSNSFSKIFSLYGERVGGLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEE  314 (397)
T ss_dssp             EEEEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred             EEEecccccccCcCCCeeEEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            99999999999999999999864321     1333333    2221 2345567888888888887532     356788


Q ss_pred             HHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEE
Q 014769          315 LIDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLR  391 (419)
Q Consensus       315 ~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~R  391 (419)
                      .+++++++++.+.+.|++++   ++. +..|++|+|+|++++         . +.+.++++++||.+.||.        |
T Consensus       315 ~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~g~--------R  375 (397)
T 3fsl_A          315 MRTRILAMRQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS---------A-AQVDRLREEFGVYLIASG--------R  375 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHTTCEECCTTC--------E
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCce-eecCCceEEEecCCC---------H-HHHHHHHHhCCEEECCCC--------e
Confidence            89999999999999998864   566 447889999998764         2 345667788999999974        9


Q ss_pred             EEeec-CHHHHHHHHHHHHHH
Q 014769          392 IAFCA-EPSALKDGLGRMKAF  411 (419)
Q Consensus       392 is~~~-~~~~l~~~l~~l~~~  411 (419)
                      ++++. ++++|++++++|+++
T Consensus       376 is~~~~~~~~i~~~~~~l~~~  396 (397)
T 3fsl_A          376 MCVAGLNTANVQRVAKAFAAV  396 (397)
T ss_dssp             EEGGGCCTTTHHHHHHHHHHH
T ss_pred             EEEEecCHhhHHHHHHHHHhh
Confidence            99965 788899999999875

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=1.1e-43  Score=334.70  Aligned_cols=333  Identities=19%  Similarity=0.286  Sum_probs=284.3

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCC-CCCcEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKL-SADDVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~g~~~  118 (419)
                      .++++|+|+.|.+    .+++++.+.+++.+.+.......|++ .+..++|+++++++      ++ ++++|++|+|+++
T Consensus        28 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~   96 (367)
T 3euc_A           28 DSHGLVKLDAMEN----PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDE   96 (367)
T ss_dssp             CCTTCEECCSSCC----CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHH
T ss_pred             CCCCeeEccCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHH
Confidence            3578999999984    36778999999999886433457876 58899999999998      45 6789999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~  197 (419)
                      +++.++++++++||+|+++.|+|.++...++..|.+++.+++++  ++.+|++.+++++++ ++++|++++|+||||.++
T Consensus        97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~  174 (367)
T 3euc_A           97 IISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLF  174 (367)
T ss_dssp             HHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999998864  567999999999987 899999999999999999


Q ss_pred             CHHHHHHHHHHHHhC--CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          198 TYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      +.+++++|+++|+++  |+++|+|++|+.+...+  .  ...++..++++++.|+||. +++|+|+||++++.       
T Consensus       175 ~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~-------  242 (367)
T 3euc_A          175 DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP-------  242 (367)
T ss_dssp             CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECH-------
T ss_pred             CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEEecchhh-cccccCceeeeeCH-------
Confidence            999999999999999  99999999999876332  2  1233445678999999999 99999999999864       


Q ss_pred             hhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcc
Q 014769          276 SGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPW  355 (419)
Q Consensus       276 ~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~  355 (419)
                       ++++.+..... .++++.+.+.++..+++.  .+++++.+++++++++.+.+.|+++|++. + .|.+|+|+|++++  
T Consensus       243 -~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~--  314 (367)
T 3euc_A          243 -QWLEQLDKVRP-PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPSAANFLLARVP--  314 (367)
T ss_dssp             -HHHHHHGGGCC-SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCCSSSEEEEECS--
T ss_pred             -HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC--
Confidence             67777776554 457899999999999986  67789999999999999999999988887 5 5667888998886  


Q ss_pred             cccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                            +..++...| .++||.+.+|..|+.  .+++|++++ ++++++++++.|+++++
T Consensus       315 ------~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~  366 (367)
T 3euc_A          315 ------DAAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ  366 (367)
T ss_dssp             ------CHHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred             ------CHHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence                  356676665 778999999988753  689999998 78999999999988763

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=1.5e-44  Score=346.87  Aligned_cols=348  Identities=19%  Similarity=0.156  Sum_probs=274.5

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHH--hCC-CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAV--RSG-KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~--~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .+|+|+.|.|... .+++++.+.+++.+.+  ... ....|+++.|..++|++|++++      ++++++|++|+|++++
T Consensus        33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a  105 (422)
T 3d6k_A           33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN  105 (422)
T ss_dssp             CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred             CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence            4799999986310 1455666777766543  122 3458999999999999999999      5788999999999999


Q ss_pred             H--HHHHHHhcCC------------CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEE
Q 014769          120 V--EVILSVLARP------------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAM  184 (419)
Q Consensus       120 l--~~~~~~l~~~------------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v  184 (419)
                      +  ..++.++..+            +|+|++++|+|+++...++..|.+++.++++++   ++|++.+++++++ +++++
T Consensus       106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v  182 (422)
T 3d6k_A          106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM  182 (422)
T ss_dssp             HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred             HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence            7  6777887665            347999999999999999999999999998643   4899999999875 67777


Q ss_pred             E-EeCCCCccccCCCHHHHHHHHHHHH-hCCCeEEEcccccc--cccCCCCCCCccc----cCCCCcEEEEecCCCcCCC
Q 014769          185 V-IINPGNPCGNVFTYHHLQEIAEMAR-KLRVMVVADEVYGH--LTFGSIPYTPMGL----FGSIVPVITLGSISKRWLV  256 (419)
Q Consensus       185 ~-i~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~--~~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~~~  256 (419)
                      + +++|+||||.++|.+++++|+++|+ ++|+++|+||+|..  +.+++....++..    .+..+++++++||||. ++
T Consensus       183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~  261 (422)
T 3d6k_A          183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH  261 (422)
T ss_dssp             EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence            7 6899999999999999999999999 99999999999986  4333323334322    2345679999999998 89


Q ss_pred             CCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc-cc-hHHHHHHHHHHHHHHHHHHHHhhc-
Q 014769          257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK-TK-EDFFCKLIDTLRESAEICYDGVKE-  332 (419)
Q Consensus       257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~-~~-~~~~~~~~~~~~~~~~~l~~~l~~-  332 (419)
                      +|+|+||++++.        ++++.+..... .+++++.++|.++..+++. .. .+++++.++.++++++.+.+.|.+ 
T Consensus       262 ~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  333 (422)
T 3d6k_A          262 AGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR  333 (422)
T ss_dssp             TTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999864        67777776643 3567899999999999986 21 367778888888898888888765 


Q ss_pred             ---CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec-CCCCC-----CCCeEEEEee-cCHHHHH
Q 014769          333 ---IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVG-----LKNWLRIAFC-AEPSALK  402 (419)
Q Consensus       333 ---~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~~Ris~~-~~~~~l~  402 (419)
                         ++++. +..|++|+|+|++++..      +..++. .++.++||.+.| |..|.     ..+++||+++ .++++++
T Consensus       334 l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~-~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~  405 (422)
T 3d6k_A          334 LSEYGVAK-WTSPTGGYFISVDVVPG------TASRVV-ELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELE  405 (422)
T ss_dssp             HGGGTCEE-ECCCSBSSCEEEEESTT------CHHHHH-HHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHH
T ss_pred             cCcCCceE-EeCCCcceEEEEECCCC------CHHHHH-HHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHH
Confidence               32344 34788999999998741      344454 556888999999 55563     2589999998 6999999


Q ss_pred             HHHHHHHHHHHHHhc
Q 014769          403 DGLGRMKAFCQRHTK  417 (419)
Q Consensus       403 ~~l~~l~~~~~~~~~  417 (419)
                      +++++|+++++++.+
T Consensus       406 ~~~~~l~~~l~~~~~  420 (422)
T 3d6k_A          406 VAMDGFATCVLMAAL  420 (422)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988754

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=2.3e-44  Score=345.30  Aligned_cols=374  Identities=20%  Similarity=0.264  Sum_probs=278.1

Q ss_pred             CchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC----CCCCCCCCCCHHHHHHHHHH
Q 014769           21 PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK----FNCYATNSGIPPARRAIADY   96 (419)
Q Consensus        21 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~   96 (419)
                      .++.+...+.++.+.   ..++++|+|+.|.|...  .++.+.+.+++.+.+.+..    ...|+++.|..++|++++++
T Consensus        13 ~~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~   87 (417)
T 3g7q_A           13 RHSGITRLMEDLNDG---LRTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVL   87 (417)
T ss_dssp             ---CHHHHHHHHHC--------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHhh---ccCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHH
Confidence            456677777666543   23578999999987531  1123677777777765431    23799999999999999999


Q ss_pred             HHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC-----eEEee-CCCCCCcHHHHhhc----CCEEEEEeccCC-CC
Q 014769           97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA-----NVLLP-RPGWPYYEGIAQRK----QVEVRHFDLLPE-RN  165 (419)
Q Consensus        97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd-----~vlv~-~p~~~~~~~~~~~~----g~~~~~~~~~~~-~~  165 (419)
                      +.+.+|.++++++|++|+|++++++.++++++++||     +|+++ +|+|+++...+...    +..+...+++.+ .+
T Consensus        88 ~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (417)
T 3g7q_A           88 LRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFK  167 (417)
T ss_dssp             HHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEE
T ss_pred             HHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccc
Confidence            999889899999999999999999999999999987     89997 99999876554322    222223333222 24


Q ss_pred             cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769          166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      +.+|++.++  ++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+... ....... ....++++
T Consensus       168 ~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~-~~~~~~~-~~~~~~~i  243 (417)
T 3g7q_A          168 YHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG-IIFSEAR-PLWNPNII  243 (417)
T ss_dssp             EECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC-CBCSCCC-CCCCTTEE
T ss_pred             cccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc-ccccccc-cCCCCCEE
Confidence            568888887  6667899999999999999999999999999999999999999999863211 1111111 12245789


Q ss_pred             EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHH-HHHHHHHH
Q 014769          246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCK-LIDTLRES  322 (419)
Q Consensus       246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~-~~~~~~~~  322 (419)
                      ++.|+|| ++++|+|+||++++.        ++++.+..... ...+++++.|.++..+++... .....+ .+++++++
T Consensus       244 ~~~s~sK-~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  314 (417)
T 3g7q_A          244 LCMSLSK-LGLPGSRCGIIIAND--------KTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQR  314 (417)
T ss_dssp             EEEESGG-GTCTTSCCEEEECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHH
T ss_pred             EEEechh-ccCCCcceEEEEeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence            9999999 599999999999864        67787776643 356678899999998887644 233333 66788888


Q ss_pred             HHHHHHHhhc-CCC--CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---------CCeE
Q 014769          323 AEICYDGVKE-IPC--ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---------KNWL  390 (419)
Q Consensus       323 ~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------~~~~  390 (419)
                      ++.+.+.|.+ +++  +. +..|.+|+|+|+.++...    .+..++...+ .++||.+.||..|+.         ++++
T Consensus       315 ~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~i  388 (417)
T 3g7q_A          315 VQQTIAIIRRYLSEERCL-IHKPEGAIFLWLWFKDLP----ITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCM  388 (417)
T ss_dssp             HHHHHHHHHHHCCTTTCE-EECCCBSSEEEEECTTCS----SCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEE
T ss_pred             HHHHHHHHHHhcccCCce-eeCCCcceEEEEEcCCCC----CCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeE
Confidence            8888888876 554  55 447889999999987421    2567777776 678999999998864         4699


Q ss_pred             EEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          391 RIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       391 Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      ||+++.++++|++++++|+++++++.++
T Consensus       389 Ris~~~~~~~i~~~~~~l~~~l~~~~~~  416 (417)
T 3g7q_A          389 RMNYVPEPDKIEAGVKILAEEIERAWRE  416 (417)
T ss_dssp             EEESCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9999889999999999999999887653

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=6.4e-44  Score=337.35  Aligned_cols=327  Identities=23%  Similarity=0.357  Sum_probs=277.3

Q ss_pred             HHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH
Q 014769           67 AIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG  146 (419)
Q Consensus        67 a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~  146 (419)
                      ++.+.+.... ..|+++.|..++|+++++++.     ++++++|++|+|+++++..++.+++++||+|+++.|+|.++..
T Consensus        47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~  120 (375)
T 3op7_A           47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD  120 (375)
T ss_dssp             HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred             HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence            4445555544 378888999999999999873     4678899999999999999999999999999999999999999


Q ss_pred             HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769          147 IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT  226 (419)
Q Consensus       147 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  226 (419)
                      .+...|.+++.+++++++++.+|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.
T Consensus       121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~  200 (375)
T 3op7_A          121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS  200 (375)
T ss_dssp             HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred             HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence            99999999999998766678899999999999889999999999999999999999999999999999999999999887


Q ss_pred             cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHc
Q 014769          227 FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILE  305 (419)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~  305 (419)
                      ++  +...+..  ..+++++++|+||.++++|+|+||++++.        ++++.++..... ..+++.+.+.++..+++
T Consensus       201 ~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  268 (375)
T 3op7_A          201 EL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAANH--------QVTDILRDYRDYTMICAGVFDDLVAQLALA  268 (375)
T ss_dssp             SS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECCH--------HHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred             cc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeCH--------HHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence            65  2222222  23467999999999988999999999854        688888776543 45667888888888877


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC
Q 014769          306 KTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG  385 (419)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~  385 (419)
                      . ...++++.+++++++++.+.+.|++++++. +..|.++++.|+.++..     .+..+++.++++++||.+.||..|+
T Consensus       269 ~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~  341 (375)
T 3op7_A          269 H-YQEILERNRHILEENLAILDQWIEEEPLVS-YIRPAVVSTSFVKIAVD-----MPMEDFCLQLLQEHGVLLVPGNRFE  341 (375)
T ss_dssp             T-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECCCSSSSCEEEEECCS-----SCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred             c-cHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCCeEEEeEEcCCC-----CCHHHHHHHHHHhCCEEEeChhhhC
Confidence            4 346778888889999999999999887877 44788888888888642     2567888888888999999999998


Q ss_pred             CCCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          386 LKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       386 ~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      .++++|++++.+++++++++++|+++++++.++
T Consensus       342 ~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~~  374 (375)
T 3op7_A          342 RDGYVRLGFACEQETLIKGLEKLSQFLRRFDKE  374 (375)
T ss_dssp             CTTEEEECCCSCHHHHHHHHHHHHHHHGGGC--
T ss_pred             CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhhc
Confidence            889999999888899999999999999887653

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=2.9e-44  Score=344.01  Aligned_cols=374  Identities=15%  Similarity=0.142  Sum_probs=291.5

Q ss_pred             hhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHH
Q 014769           16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRS-GKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +....+.+.++.++....+    ..++++|||+.|.| ......++++.+.+++.+.+.. .....|.+..|..++|+++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l   83 (412)
T 1ajs_A            8 EVPQAQPVLVFKLIADFRE----DPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA   83 (412)
T ss_dssp             TCCCCCCCHHHHHHHHHHT----CCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred             hCcccCCchHHHHHHHHhh----cCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence            3455667788888775432    24788999999986 3222245678999999888733 2445798888999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEE--cccHHHHHHHHHH--HhcCCC-----CeEEeeCCCCCCcHHHHhhcCCE-EEEEeccCC
Q 014769           94 ADYLSRDLPYKLSADDVYV--TLGCKQAVEVILS--VLARPG-----ANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPE  163 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~--~l~~~g-----d~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~  163 (419)
                      ++++...++..+++++|++  |+|++++++.+++  .++.+|     |+|++++|+|+++...+...|.+ ++.+++.++
T Consensus        84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  163 (412)
T 1ajs_A           84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT  163 (412)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred             HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence            9999765555567899999  9999999999965  445789     99999999999999999999999 999987654


Q ss_pred             CCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC--CCCCCcccc
Q 014769          164 RNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLF  238 (419)
Q Consensus       164 ~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~  238 (419)
                      +++.+|++.+++++++   +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++  ....++..+
T Consensus       164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~  243 (412)
T 1ajs_A          164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF  243 (412)
T ss_dssp             TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred             CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence            6678999999988864   55677789999999999999999999999999999999999999988765  122233323


Q ss_pred             C-CCCcEEEEecCCCcCCCCCceeEEEEee--CCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----h
Q 014769          239 G-SIVPVITLGSISKRWLVPGWRFGWLVTN--DPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----E  309 (419)
Q Consensus       239 ~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~--~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~  309 (419)
                      . ..++++++.|+||.++++|+|+||++++  +++ ..  ..+++.+.... ..+.+++.++|.++..+|+...     .
T Consensus       244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  320 (412)
T 1ajs_A          244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPD-SI--LRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWT  320 (412)
T ss_dssp             HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHH
T ss_pred             hccCCcEEEEEecccccCCCCcceEEEEEecCCHH-HH--HHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHH
Confidence            2 2357899999999999899999999982  210 00  01444455432 3334468889999999998642     3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                      +++++.+++++++++.+.+.|++++   ++. +..|.+|+|+|+.++          .+++..+++++||.+.|+     
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~-----  384 (412)
T 1ajs_A          321 GNVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPS-----  384 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTT-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-EEcCCCceEEEeCCC----------HHHHHHHHHhCCEEecCC-----
Confidence            4778889999999999999999873   365 446888999997653          356677778899999875     


Q ss_pred             CCeEEEEee-cCHHHHHHHHHHHHHHHHHH
Q 014769          387 KNWLRIAFC-AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       387 ~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~  415 (419)
                         +|++++ .+++++++++++|++++++.
T Consensus       385 ---~Ris~~~~~~~~i~~~~~~l~~~l~~~  411 (412)
T 1ajs_A          385 ---GRINMCGLTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             ---SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             ---cEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence               499997 58999999999999998763

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=1e-44  Score=348.74  Aligned_cols=351  Identities=18%  Similarity=0.123  Sum_probs=279.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHH--HHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAI--VDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~--~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ...+|||+.|.|... .+|.++.+.+++  .+++...  ....|+++.|..++|++|++++      ++++++|++|+|+
T Consensus        32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~  104 (427)
T 3ppl_A           32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS  104 (427)
T ss_dssp             TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred             CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence            456899999987531 122233455555  4444332  2468999899999999999999      6788999999999


Q ss_pred             HHHH--HHHHHHhcC--C----------CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCc
Q 014769          117 KQAV--EVILSVLAR--P----------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNT  181 (419)
Q Consensus       117 ~~al--~~~~~~l~~--~----------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~  181 (419)
                      ++++  ..++.+++.  +          ||+|++++|+|..+...++..|.+++.++++++   ++|++.|+++++ +++
T Consensus       105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~  181 (427)
T 3ppl_A          105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV  181 (427)
T ss_dssp             HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred             HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence            9999  588888876  6          899999999999999999999999999998653   489999999985 467


Q ss_pred             cEEEEe-CCCCccccCCCHHHHHHHHHHH-HhCCCeEEEcccccccccCCCCCC--Ccccc----CCCCcEEEEecCCCc
Q 014769          182 AAMVII-NPGNPCGNVFTYHHLQEIAEMA-RKLRVMVVADEVYGHLTFGSIPYT--PMGLF----GSIVPVITLGSISKR  253 (419)
Q Consensus       182 ~~v~i~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~--~~~~~----~~~~~~i~~~s~sK~  253 (419)
                      ++++++ +|+||||.++|.+++++|+++| +++|+++|+||+|+.+.|++....  ++..+    +..+++++++||||.
T Consensus       182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~  261 (427)
T 3ppl_A          182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI  261 (427)
T ss_dssp             EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred             eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence            777655 7799999999999999999999 999999999999999887765432  23222    245679999999999


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc-cc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK-TK-EDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~-~~-~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                       +++|+|+||++++.        ++++.+..... ...+++.+.|.++..+++. .. .+++++.++.++++++.+.+.|
T Consensus       262 -~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L  332 (427)
T 3ppl_A          262 -TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEIL  332 (427)
T ss_dssp             -SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             89999999999865        57777776643 3567899999999999986 21 4677788888888888888887


Q ss_pred             hc-CC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec-CCCCC-----CCCeEEEEeec-CHH
Q 014769          331 KE-IP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVG-----LKNWLRIAFCA-EPS  399 (419)
Q Consensus       331 ~~-~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~~Ris~~~-~~~  399 (419)
                      .+ ++   ++. +..|.+|+|+|++++..      +..++... +.++||.+.| |..|.     .++++||+++. +++
T Consensus       333 ~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~~~-l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~  404 (427)
T 3ppl_A          333 DSRLAEYGVAQ-WTVPAGGYFISLDVVPG------TASRVAEL-AKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVE  404 (427)
T ss_dssp             HHHHGGGTCCE-ECCCSBSSCEEEECSTT------CHHHHHHH-HHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHH
T ss_pred             HHhcCCCCceE-EeCCCccEEEEEECCcc------hHHHHHHH-HHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHH
Confidence            65 32   455 45788999999999742      45566554 4778999999 55554     36899999975 889


Q ss_pred             HHHHHHHHHHHHHHHHhcc
Q 014769          400 ALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~~~~~  418 (419)
                      ++++++++|.+++++...+
T Consensus       405 ~i~~~~~~l~~~l~~~~~~  423 (427)
T 3ppl_A          405 ELEVAMDGVATCVLLAAAE  423 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876543

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=1.2e-43  Score=343.01  Aligned_cols=379  Identities=18%  Similarity=0.284  Sum_probs=293.1

Q ss_pred             hCCchhHHHHHHHHHHhhhcCCCCCee-eccCCCCCCCCCCCChHHHHHHHHHHHhC-------CC----CCCCCCCCCC
Q 014769           19 AAPAVTVKTSLASIIDSVNKNDPRPVV-PLGYGDPTAFPCFRTAVEAEDAIVDAVRS-------GK----FNCYATNSGI   86 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-------~~----~~~Y~~~~g~   86 (419)
                      ...+..++.++..+.+...   .+++| +|+.|.|...  .++.+.+.+++.+.+.+       ..    ...|+++.|.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~   85 (444)
T 3if2_A           11 FTQPTGISQLMDDLGDALK---SDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGD   85 (444)
T ss_dssp             HHSCCHHHHHHHHHHHHHH---SSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCC
T ss_pred             ccCchhHHHHHHHHHhhhc---CchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCC
Confidence            3455678888877765443   47899 9999987531  11236667777776655       31    2479999999


Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC--------------eEEee-CCCCCCcHH-----
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA--------------NVLLP-RPGWPYYEG-----  146 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd--------------~vlv~-~p~~~~~~~-----  146 (419)
                      +++|+++++++.+.+|.++++++|++|+|++++++.++.+++++||              +|+++ +|+|..+..     
T Consensus        86 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~  165 (444)
T 3if2_A           86 SAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEG  165 (444)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSS
T ss_pred             HHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccccc
Confidence            9999999999999899999999999999999999999999999888              78776 999998865     


Q ss_pred             -HHhhcCCEEEEEeccCCC---CcccChHHHHHh---hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          147 -IAQRKQVEVRHFDLLPER---NWEVDLDAVEAL---ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       147 -~~~~~g~~~~~~~~~~~~---~~~~~~~~l~~~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                       .+...|..+..+++++++   ++.+|++.|+++   +++++++|++++|+||||.++|.+++++|+++|+++|+++|+|
T Consensus       166 ~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~D  245 (444)
T 3if2_A          166 QHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIID  245 (444)
T ss_dssp             CCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             chhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEE
Confidence             344567777777765422   367999999987   6778899999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHH
Q 014769          220 EVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQG  298 (419)
Q Consensus       220 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~  298 (419)
                      |+|+.+... ....... ....++++++.|+||. +++|+|+||++++.        ++++.+..... ..++++++.|.
T Consensus       246 e~~~~~~~~-~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~  314 (444)
T 3if2_A          246 NAYGMPFPN-IIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNAVVNLAPTRFGAA  314 (444)
T ss_dssp             CTTCTTTTC-CBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCCHHHH
T ss_pred             CCCCCcccc-ccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHHhccCCCChHHHH
Confidence            999853211 1111111 1224578999999997 89999999999864        67777776643 35677888999


Q ss_pred             HHHHHHcccc-hHHHHH-HHHHHHHHHHHHHHHhhc-CCC--CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769          299 AIPQILEKTK-EDFFCK-LIDTLRESAEICYDGVKE-IPC--ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE  373 (419)
Q Consensus       299 a~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~  373 (419)
                      ++..+++... .....+ .++.++++++.+.+.|.+ +++  +. +..|.+|+++|+.++...    .+..+++..| .+
T Consensus       315 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~  388 (444)
T 3if2_A          315 IATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLM-IHKPEGAIFLWLWFKDLP----ISTLDLYERL-KA  388 (444)
T ss_dssp             HHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEE-EECCCBSSEEEEEETTCS----SCHHHHHHHH-HH
T ss_pred             HHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-EecCCccEEEEEEcCCCC----CCHHHHHHHH-HH
Confidence            9988887643 223333 567788888888888876 554  34 446889999999987421    2567777766 67


Q ss_pred             cCeEeecCCCCCC----------CCeEEEEeecCHHHHHHHHHHHHHHHHHHhccC
Q 014769          374 ESVIVTPGIYVGL----------KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH  419 (419)
Q Consensus       374 ~gv~v~~g~~~~~----------~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~~  419 (419)
                      +||.+.||+.|..          .+++||+++.++++|++++++|+++++++..+|
T Consensus       389 ~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~~~  444 (444)
T 3if2_A          389 KGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYDNK  444 (444)
T ss_dssp             TTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHccC
Confidence            8999999998854          268999997799999999999999999887653

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=7.2e-44  Score=337.60  Aligned_cols=379  Identities=14%  Similarity=0.095  Sum_probs=277.8

Q ss_pred             ccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHH
Q 014769           11 FEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA   89 (419)
Q Consensus        11 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~l   89 (419)
                      .+.++.+.+++++.|..+++...+    + +.++|||++|... ..+..+..+.|++|....++......|.|..|+++|
T Consensus        18 ~~~~~~v~~~p~d~i~~l~~~~~~----d-~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~l   92 (420)
T 4h51_A           18 AERWQKIQAQAPDVIFDLAKRAAA----A-KGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPF   92 (420)
T ss_dssp             HHHHHTCCCCCCCHHHHHHHHHHH----C-CSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHH
T ss_pred             hHHHhCCCCCCCChHHHHHHHHhc----C-CCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHH
Confidence            344556677888999998876543    2 4458999999321 112345668899998877777666679999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCc--EEEcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCCcHHHHhhcCCE-EEEEeccC
Q 014769           90 RRAIADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLP  162 (419)
Q Consensus        90 r~~ia~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~  162 (419)
                      |+++++++...   ....+.  .+.|.|+|.|+..++..+    .+|||+|++++|+|+.|..+++..|.+ +..++...
T Consensus        93 r~aia~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~  169 (420)
T 4h51_A           93 IDEAVKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYD  169 (420)
T ss_dssp             HHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEE
T ss_pred             HHHHHHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccc
Confidence            99999998432   223333  355899998887776655    469999999999999999999999987 45555544


Q ss_pred             CCCcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc---c
Q 014769          163 ERNWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM---G  236 (419)
Q Consensus       163 ~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~---~  236 (419)
                      ...+.+|.+.+.+.+.   ++++++++++||||||.+++.++|++|+++|+++++++|+|++|.++.+++......   .
T Consensus       170 ~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~  249 (420)
T 4h51_A          170 PKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARL  249 (420)
T ss_dssp             GGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred             ccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHh
Confidence            5567788888777653   456677788999999999999999999999999999999999999998875332111   1


Q ss_pred             ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc-----hH
Q 014769          237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK-----ED  310 (419)
Q Consensus       237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~  310 (419)
                      ..+...+++++.||||.|+++|+|+||++++.+.... ...+...+... ....+.++...|.++..++....     .+
T Consensus       250 ~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~  328 (420)
T 4h51_A          250 FARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEA  328 (420)
T ss_dssp             HHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             HHhhCceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHH
Confidence            1233456899999999999999999999987632100 00122222222 23456778888888888887522     24


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcC--CC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEI--PC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK  387 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~  387 (419)
                      .++.++++++++|+.+.+.|+++  ++ +. ...+++|||.|+.++         . +.++ +|+++||++.|++     
T Consensus       329 ~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~-~i~~q~GmF~~~gls---------~-e~v~-~L~e~~Vy~~~~g-----  391 (420)
T 4h51_A          329 ELSAMAERIRTMRRTVYDELLRLQTPGSWE-HVINQIGMFSFLGLS---------K-AQCE-YCQNHNIFITVSG-----  391 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHCCSSEEECCCC---------H-HHHH-HHHHTTEECCTTC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eecCCCceEEecCcC---------H-HHHH-HHHhCCEEEcCCC-----
Confidence            56778899999999999999875  22 33 236788999997664         2 3344 4588999998864     


Q ss_pred             CeEEEEe-ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          388 NWLRIAF-CAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       388 ~~~Ris~-~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                         |||+ +.++++|+.+.++|.+++++..++
T Consensus       392 ---Ris~Agl~~~ni~~~a~aI~~vvr~i~re  420 (420)
T 4h51_A          392 ---RANMAGLTHETALMLAQTINDAVRNVNRE  420 (420)
T ss_dssp             ---EEEGGGCCHHHHHHHHHHHHHHHC-----
T ss_pred             ---EEEeccCCHHHHHHHHHHHHHHHHHhhcC
Confidence               9999 579999999999999999887653

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=7.8e-44  Score=344.05  Aligned_cols=376  Identities=16%  Similarity=0.155  Sum_probs=289.2

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHH--hCCCCCCCCCCCCCHHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAV--RSGKFNCYATNSGIPPA   89 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~--~~~~~~~Y~~~~g~~~l   89 (419)
                      ..+.+...+++.|..++..+.+    ...+.+|||+.|.| ...+..++.+++.+++.+..  .......|.+..|.+++
T Consensus        24 ~~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~l   99 (448)
T 3meb_A           24 VFSGFPASPPDAILNLTVLYNA----DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLF   99 (448)
T ss_dssp             TTTTCCCCCCCTTHHHHHHHHH----CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHH
T ss_pred             HHhcCCCCCCChHHHHHHHHHh----CCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHH
Confidence            3444556677778888876543    34566899999987 33233446678888876655  22334589998999999


Q ss_pred             HHHHHHHHHhhCCCC---CCCCcEEE--cccHHHHHHH--HHHHhcCCCCeEEeeCCCCCCcHHHHh----hcCCEEEEE
Q 014769           90 RRAIADYLSRDLPYK---LSADDVYV--TLGCKQAVEV--ILSVLARPGANVLLPRPGWPYYEGIAQ----RKQVEVRHF  158 (419)
Q Consensus        90 r~~ia~~l~~~~~~~---~~~~~i~~--t~g~~~al~~--~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~  158 (419)
                      |+++++++.   |..   +++++|++  |+|++++++.  .+..++.+||+|++++|+|..+...++    ..|.+++.+
T Consensus       100 r~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~  176 (448)
T 3meb_A          100 LEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEY  176 (448)
T ss_dssp             HHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEE
T ss_pred             HHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEE
Confidence            999999983   322   22689999  9999999988  456677899999999999999999999    999999999


Q ss_pred             eccCCC-CcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CC
Q 014769          159 DLLPER-NWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PY  232 (419)
Q Consensus       159 ~~~~~~-~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~  232 (419)
                      ++...+ ++.+|++.+++++++   +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++.  ..
T Consensus       177 ~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~  256 (448)
T 3meb_A          177 TYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADA  256 (448)
T ss_dssp             CCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHT
T ss_pred             eccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCc
Confidence            984444 578999999998874   466778899999999999999999999999999999999999999887651  11


Q ss_pred             CCcccc-CCCCcEEEEecCCCcCCCCCceeEEE--Ee--------eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHH
Q 014769          233 TPMGLF-GSIVPVITLGSISKRWLVPGWRFGWL--VT--------NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAI  300 (419)
Q Consensus       233 ~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~--~~--------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~  300 (419)
                      .++..+ ....+++++.|+||.|+++|+|+||+  ++        +++. ..  .++++.+.... ..+.+++.+.|.++
T Consensus       257 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~~--~~l~~~l~~~~~~~~~~~~~~~~~a~  333 (448)
T 3meb_A          257 FAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-LS--AAMVSGMTLQIRKTWSMSAIHGAYIV  333 (448)
T ss_dssp             HHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred             hhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-HH--HHHHHHHHHHHhcccCCccHHHHHHH
Confidence            222222 23457899999999999999999998  65        3210 00  03555555432 33456788899999


Q ss_pred             HHHHcccc-----hHHHHHHHHHHHHHHHHHHHHhhcC--CC------CCCCCCCCceEEEEeecCcccccCCCCHHHHH
Q 014769          301 PQILEKTK-----EDFFCKLIDTLRESAEICYDGVKEI--PC------ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFA  367 (419)
Q Consensus       301 ~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~--~~------~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~  367 (419)
                      ..+|....     .+.+++++++++++++.+.+.|+++  ++      +. +..|++|+|+|+.++          .+++
T Consensus       334 ~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~----------~~~~  402 (448)
T 3meb_A          334 QVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWD-HILTAIGMFTFTGLT----------PEHV  402 (448)
T ss_dssp             HHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCT-HHHHCCSSEEECCCC----------HHHH
T ss_pred             HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccc-eeCCCceEEEecCCC----------HHHH
Confidence            88887632     1447888899999999999999876  55      55 347889999997663          3667


Q ss_pred             HHHHHhcCeEeecCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHHHHh
Q 014769          368 LKLAKEESVIVTPGIYVGLKNWLRIAFCA-EPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       368 ~~ll~~~gv~v~~g~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ..+++++||.+.||+.       |||++. ++++|++++++|+++++++-
T Consensus       403 ~~ll~~~gV~v~~G~g-------Ris~a~~~~~~i~~~~~~l~~~l~~~~  445 (448)
T 3meb_A          403 DYLKEKWSIYLVKAGG-------RMSMCGLTESNCDYVAEAIHDAVTKLP  445 (448)
T ss_dssp             HHHHHHHCEEECSGGG-------EEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred             HHHHHhCCEEEeCCCc-------EEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence            7888889999999862       999965 88889999999999998653

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=8.6e-44  Score=349.76  Aligned_cols=373  Identities=15%  Similarity=0.224  Sum_probs=284.2

Q ss_pred             chhHHHHHHHHHHhhhcCCCCC----eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769           22 AVTVKTSLASIIDSVNKNDPRP----VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL   97 (419)
Q Consensus        22 ~~~i~~~~~~~~~~~~~~~~~~----~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l   97 (419)
                      ...+...+.++.+.....++.+    +|+|+.|.|.    + +++.+.+++.+.+..   ..|+++.|..++|+++++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~----~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~  151 (546)
T 2zy4_A           80 IDGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLG----L-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQY  151 (546)
T ss_dssp             STTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSC----C-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHH
T ss_pred             cccchhHHHHHHHhcCCCCcchhHHhhhecccCCCC----C-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHH
Confidence            3577777777766543222222    8999999864    3 346677777777642   47999999999999988765


Q ss_pred             -HhhCCCCC---CCCcEEEcccHHHHHHHHHHH-----hcCCCCeEEeeCCCCCCcHHHHhh--cCCEEEEEeccCCCCc
Q 014769           98 -SRDLPYKL---SADDVYVTLGCKQAVEVILSV-----LARPGANVLLPRPGWPYYEGIAQR--KQVEVRHFDLLPERNW  166 (419)
Q Consensus        98 -~~~~~~~~---~~~~i~~t~g~~~al~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~  166 (419)
                       .++.+.+.   ++++|++|+|+++++..++.+     ++++||+|++++|+|+.+...+..  .|.+++.++++++++|
T Consensus       152 ~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~  231 (546)
T 2zy4_A          152 IIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNW  231 (546)
T ss_dssp             HHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTT
T ss_pred             HHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCC
Confidence             44444322   568999999999999999988     578999999999999999877544  4678888888777778


Q ss_pred             ccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHH--HhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769          167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA--RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV  244 (419)
Q Consensus       167 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~--~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  244 (419)
                      .+|++.|++++.++++++++++|+||||.+++.+++++|+++|  +++|++||+||+|+.+.++   ..++.... .+++
T Consensus       232 ~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~  307 (546)
T 2zy4_A          232 QYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENT  307 (546)
T ss_dssp             BCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGE
T ss_pred             CCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCE
Confidence            8999999988877889999999999999999999999999999  8899999999999998753   22333322 2578


Q ss_pred             EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------------h------------------------c
Q 014769          245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------------L------------------------S  287 (419)
Q Consensus       245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------------~------------------------~  287 (419)
                      +++.||||.++++|+|+||+++++++       +++.+...             .                        .
T Consensus       308 i~~~S~SK~~g~~GlRiG~~~~~~~~-------l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  380 (546)
T 2zy4_A          308 LLVYSFSKYFGATGWRLGVVAAHQQN-------VFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALN  380 (546)
T ss_dssp             EEEEESTTTTTCGGGCEEEEEEESSC-------HHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTG
T ss_pred             EEEEeCccccCCCCcceEEEEECCHH-------HHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhh
Confidence            99999999999999999999997631       44443210             0                        1


Q ss_pred             cccCCchHHHHHH-----HHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc--ccC-
Q 014769          288 IYSDIPTFIQGAI-----PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL--LED-  359 (419)
Q Consensus       288 ~~~~~~~~~~~a~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~--~~~-  359 (419)
                      .+.+.+.+.|.++     .++++.. ..+.++.++.++++++.+.+.|. + ++. +..|++|+|+|++++...  ..+ 
T Consensus       381 ~~~~~s~~~Q~a~a~~a~~all~~~-~~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~  456 (546)
T 2zy4_A          381 HTAGLSTPQQVQMALFSLFALMDEA-DEYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGE  456 (546)
T ss_dssp             GGCSSCHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCH
T ss_pred             ccCCCCcHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccH
Confidence            2345677777764     3445432 57788889999999999999886 4 444 346789999999885310  000 


Q ss_pred             --------CCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeec-CHHHHHHHHHHHHHHHHHHhc
Q 014769          360 --------INDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCA-EPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       360 --------~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~-~~~~l~~~l~~l~~~~~~~~~  417 (419)
                              ..++.+++.+++.++||.+.||..|+. .+++||+++. +++++++++++|+++++++.+
T Consensus       457 ~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~  524 (546)
T 2zy4_A          457 AFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELYA  524 (546)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence                    013456667778899999999999976 5789999975 889999999999999987753

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=2.7e-43  Score=330.42  Aligned_cols=323  Identities=19%  Similarity=0.306  Sum_probs=264.9

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      .++|+|+.|.+.    +++++.+      ++  .....|+++ +..++|+++++++      ++++++|++|+|++++++
T Consensus        29 ~~~i~l~~~~~~----~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~   89 (356)
T 1fg7_A           29 NGDVWLNANEYP----TAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE   89 (356)
T ss_dssp             TCSEECSSCCCS----SCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred             CceEEeeCCCCC----CCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence            468999999753    3334444      12  234689875 5899999999999      677899999999999999


Q ss_pred             HHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          122 VILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       122 ~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      .++++++++| |+|++++|+|+++...++..|.+++.++++  .++.+|+++++++++ +++++++++|+||||.++|.+
T Consensus        90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~  166 (356)
T 1fg7_A           90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ  166 (356)
T ss_dssp             HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999 999999999999999999999999888875  356789999999887 789999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      ++++|+++|+ +|+++|+||+|..+.. +   .++..+ +..++++++.|+||.|+++|+|+||+++++        +++
T Consensus       167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~  233 (356)
T 1fg7_A          167 DFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EVI  233 (356)
T ss_dssp             HHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HHH
T ss_pred             HHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--------HHH
Confidence            9999999999 9999999999998652 1   122222 334578999999999999999999999854        677


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... .++++.++|.++.++++....+++++.+++++++++.+.+.|++++++..+ .|.+|+|+|++++      
T Consensus       234 ~~l~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~------  305 (356)
T 1fg7_A          234 NLLMKVIA-PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFK------  305 (356)
T ss_dssp             HHHHHHSC-SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEET------
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE-CCCCCeEEEEECC------
Confidence            77776654 347888999999888875222338888999999999999999988553213 5678889999885      


Q ss_pred             CCCHHHHHHHHHHhcCeEeec-CCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTP-GIYVGLKNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~-g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                        +..++..+| .++||.+.| |..|+.++++||++++ +++++++++.|+++
T Consensus       306 --~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~~-~~e~~~~~~~l~~~  354 (356)
T 1fg7_A          306 --ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVGT-REESQRVIDALRAE  354 (356)
T ss_dssp             --THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECCC-HHHHHHHHHHHHTC
T ss_pred             --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeCC-HHHHHHHHHHHHhh
Confidence              356777777 678999999 8888877899999984 78999999888753

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=3.3e-44  Score=343.61  Aligned_cols=373  Identities=14%  Similarity=0.118  Sum_probs=286.6

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHH-HHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVD-AVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      .....++.+..+...+.+    ..++++|||+.|.| ...+..++++.+.+++.+ .+.......|++..|..++|++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia   83 (412)
T 1yaa_A            8 IELLPPDALFGIKQRYGQ----DQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAA   83 (412)
T ss_dssp             CCCCCCCTTHHHHHHHHT----CCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHH
T ss_pred             CcccCCCcHHHHHHHHhc----CCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHH
Confidence            445556677777765433    24678999999986 222233567899999998 876444557988889999999999


Q ss_pred             HHHHhhCCCCCCCCcEEE--cccHHHHHHHHH--HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccCh
Q 014769           95 DYLSRDLPYKLSADDVYV--TLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL  170 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  170 (419)
                      +++.+.+|..+++++|++  |+|++++++.++  ..+..+||+|++++|+|+++...++..|.+++.+++...+++.+|+
T Consensus        84 ~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  163 (412)
T 1yaa_A           84 KIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDL  163 (412)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECH
T ss_pred             HHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCH
Confidence            999765665567899999  999999999984  3344699999999999999999999999999999872233578999


Q ss_pred             HHHHHhhcCC--ccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC--CCCCCccccC-CCC--
Q 014769          171 DAVEALADKN--TAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLFG-SIV--  242 (419)
Q Consensus       171 ~~l~~~~~~~--~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~-~~~--  242 (419)
                      +.+++++++.  ++.+ ++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++  ....++..+. ..+  
T Consensus       164 ~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (412)
T 1yaa_A          164 NGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTV  243 (412)
T ss_dssp             HHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTT
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCC
Confidence            9999888653  2444 459999999999999999999999999999999999999988764  1122222221 123  


Q ss_pred             -cEEEEecCCCcCCCCCceeEEEE--e----eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----h
Q 014769          243 -PVITLGSISKRWLVPGWRFGWLV--T----NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----E  309 (419)
Q Consensus       243 -~~i~~~s~sK~~~~~G~r~G~~~--~----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~  309 (419)
                       ++++++|+||.++++|+|+||++  +    ++++ ..  ..+++.+.... ..+.+++.+.|.++.++|+...     .
T Consensus       244 ~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~-~~--~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  320 (412)
T 1yaa_A          244 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKT-IK--PAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH  320 (412)
T ss_dssp             CCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred             cceEEEeccCCCCCCcCCcceEEEEEecCCCCCHH-HH--HHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHH
Confidence             68999999999988899999998  6    1210 00  01666666632 3345668889999999998642     2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                      +++++.+++++++++.+.+.|++++   ++. +..|.+|+|+|+.++         ... +.++++++||.+.|      
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~-~~~~l~~~gi~v~~------  383 (412)
T 1yaa_A          321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT---------PQM-VKRLEETHAVYLVA------  383 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC---------HHH-HHHHHHHHCEECCT------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-eeccCceEEEeeCCC---------HHH-HHHHHHhCCEEecc------
Confidence            4788889999999999999998863   366 447888999997653         333 47777888999987      


Q ss_pred             CCeEEEEeec-CHHHHHHHHHHHHHHHHHH
Q 014769          387 KNWLRIAFCA-EPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       387 ~~~~Ris~~~-~~~~l~~~l~~l~~~~~~~  415 (419)
                        ++||+++. +++++++++++|+++++.+
T Consensus       384 --~~Ris~~~~~~~~i~~~~~~l~~~~~~~  411 (412)
T 1yaa_A          384 --SGRASIAGLNQGNVEYVAKAIDEVVRFY  411 (412)
T ss_dssp             --TSEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             --CcEEEEccCCHhHHHHHHHHHHHHHHhh
Confidence              46999974 8999999999999988753

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=6.9e-43  Score=328.89  Aligned_cols=336  Identities=16%  Similarity=0.276  Sum_probs=272.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +++++|||+.|.+.    +++++.+.+++.+.+..  ...|++ .|..++|+++++++      ++++++|++|+|++++
T Consensus        22 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a   88 (364)
T 1lc5_A           22 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES   88 (364)
T ss_dssp             CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred             CccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHH
Confidence            36679999999843    45678999999888754  357866 58999999999999      5678899999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++.++  +||+|+++.|+|+++...++..|.+++.+++++++++.+ ++.+.+.++++++++++++|+||||.++|.
T Consensus        89 l~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~  165 (364)
T 1lc5_A           89 IFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPER  165 (364)
T ss_dssp             HHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCH
Confidence            99999999  679999999999999999999999999998865334444 566666666678889999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE-eeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~  278 (419)
                      +++++|+++|+++|+++|+||+|+.+.+++...  +..++..++++++.|+||.++++|+|+||++ +++        ++
T Consensus       166 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------~~  235 (364)
T 1lc5_A          166 PLLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--------AA  235 (364)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH--------HH
T ss_pred             HHHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECCH--------HH
Confidence            999999999999999999999999987753222  2223444578999999999988999999999 654        57


Q ss_pred             HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      ++.++.... +++++.+++.++.++++.  .+++++.+++++++++.+.+.|+++|++. + .+..|+|+|++++.    
T Consensus       236 ~~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~g~~~~~~~~~----  306 (364)
T 1lc5_A          236 MARMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER----  306 (364)
T ss_dssp             HHHHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC----
T ss_pred             HHHHHHhCC-CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-CCCCCeEEEEECCC----
Confidence            777776544 467889999999999886  46888899999999999999999888877 4 34556788888763    


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                         +..++...|+ ++||.+.||..|+.  ++++||+++. +++++++++.|+++++++
T Consensus       307 ---~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~  360 (364)
T 1lc5_A          307 ---EDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIRS-AAQNERLLAALRNVLTGI  360 (364)
T ss_dssp             ---TTCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHHC---
T ss_pred             ---cHHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhhcc
Confidence               2335666664 56999999998853  5899999874 677888888888887665

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=1.8e-43  Score=347.50  Aligned_cols=358  Identities=18%  Similarity=0.230  Sum_probs=282.9

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhh-CC-CCCC-CCcEEEcccHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD-LP-YKLS-ADDVYVTLGCKQA  119 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~-~~-~~~~-~~~i~~t~g~~~a  119 (419)
                      ++|+|+.|.|.    ++ ++.+++++.+.+...  ..|.+..|..++|+++++++.+. .+ ..+. +++|++|+|++++
T Consensus       104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~~--~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~a  176 (533)
T 3f6t_A          104 DAVNYCHTELG----LN-RDKVVAEWVNGAVAN--NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAA  176 (533)
T ss_dssp             HHHHHHHHTTC----CC-HHHHHHHHHHHHHTC--SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHH
T ss_pred             hheeccCCCCC----cC-CcHHHHHHHHHHHhC--CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHH
Confidence            47899999864    33 566666666666542  23447789999999999999765 34 4444 4799999999999


Q ss_pred             HHHHHHH-----hcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC--CCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769          120 VEVILSV-----LARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP--ERNWEVDLDAVEALADKNTAAMVIINPGNP  192 (419)
Q Consensus       120 l~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~i~~p~np  192 (419)
                      +..++.+     ++++||+|++++|+|.++...+...|.+++.++++.  +.++.+|++.|++++++++++|++++|+||
T Consensus       177 l~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NP  256 (533)
T 3f6t_A          177 IVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNP  256 (533)
T ss_dssp             HHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTT
T ss_pred             HHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCC
Confidence            9999998     788999999999999999999999999999998865  567899999999999888999999999999


Q ss_pred             cccCCCHHHHHHHHHHHH-hCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          193 CGNVFTYHHLQEIAEMAR-KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       193 tG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      ||.++|.+++++|+++|+ ++|+++|+||+|+.+.++..   ++.... .+++++++||||.++++|+|+||+++++...
T Consensus       257 tG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~  332 (533)
T 3f6t_A          257 TSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEKNV  332 (533)
T ss_dssp             TCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESSCH
T ss_pred             CccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEecCcccCCCcccceEEEEECcHHH
Confidence            999999999999999999 68999999999998876432   222222 3578999999999999999999999986421


Q ss_pred             ccchhhHHH--------------------------------HHHhhh-ccccCCchHHHHH----HHHHHc-----ccch
Q 014769          272 IFQKSGIID--------------------------------SIKDCL-SIYSDIPTFIQGA----IPQILE-----KTKE  309 (419)
Q Consensus       272 ~~~~~~~~~--------------------------------~l~~~~-~~~~~~~~~~~~a----~~~~l~-----~~~~  309 (419)
                      +-   .+++                                .++... ..+.+++.+.|.+    +..+|.     ....
T Consensus       333 ~~---~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~  409 (533)
T 3f6t_A          333 FD---DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDD  409 (533)
T ss_dssp             HH---HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBC
T ss_pred             HH---HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchH
Confidence            00   1221                                122222 2355678888877    345564     2235


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc--cC---------CCCHHHHHHHHHHhcCeEe
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL--ED---------INDDIEFALKLAKEESVIV  378 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~--~~---------~~~~~~~~~~ll~~~gv~v  378 (419)
                      .++++.+++++++++.+.+.|. + ++. +..|.+|+|+|+.++....  .+         ..++.+++.++++++||.+
T Consensus       410 ~~~~~~~~~~~~r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v  486 (533)
T 3f6t_A          410 PYIDIARKLVSERYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVL  486 (533)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEE
Confidence            7889999999999999999997 6 566 5588999999998863100  00         0146678888888999999


Q ss_pred             ecCCCCCC-CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769          379 TPGIYVGL-KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       379 ~~g~~~~~-~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .||+.|+. .+++|+|++ .+++++++++++|.++++++.+
T Consensus       487 ~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~  527 (533)
T 3f6t_A          487 VDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYE  527 (533)
T ss_dssp             CTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999987 689999996 5899999999999999988754

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=2.1e-42  Score=325.19  Aligned_cols=334  Identities=17%  Similarity=0.246  Sum_probs=272.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +++++|||+.|.+.    +++++.+.+++.+.+..  ...|+. .+..++|+++++++      ++++++|++|+|++++
T Consensus        24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a   90 (361)
T 3ftb_A           24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEI   90 (361)
T ss_dssp             ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred             CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence            47889999999753    56789999999998875  346754 68999999999999      6788999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ++.++.++    |+|+++.|+|.++...++..|.+++.++++++.  .++++.+++++++ ++++++++|+||||.++|.
T Consensus        91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~  163 (361)
T 3ftb_A           91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINK  163 (361)
T ss_dssp             HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred             HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence            99999988    999999999999999999999999999987543  4677999999987 9999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|+++|+++|+++|+||+|.++.++ .........+..+++++++|+||.++++|+|+||+++.+       ++++
T Consensus       164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~  235 (361)
T 3ftb_A          164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA  235 (361)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred             HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence            99999999999999999999999998876 333333344455678999999999988999999998433       2677


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... +++++++.+.++..+++.  .+++++.+++++++++.+.+.|+++|++..+ .+..|.|+|++++.     
T Consensus       236 ~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~-----  306 (361)
T 3ftb_A          236 AKIKAKQN-PWNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRV-FSPHANFVLCRLEN-----  306 (361)
T ss_dssp             HHHHTTSC-TTCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEE-ECCSSSEEEEEESS-----
T ss_pred             HHHHhhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCcee-cCCCCeEEEEEcCC-----
Confidence            88876654 467889999999999885  5788999999999999999999988777512 34446678888864     


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                       .+..++...|++ +||.+.||..|+.  ++++|++++ ++++++++++.|+++.+
T Consensus       307 -~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~  359 (361)
T 3ftb_A          307 -ISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN  359 (361)
T ss_dssp             -SCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence             256778877755 5999999998864  689999998 45566666666665544

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=1e-43  Score=341.44  Aligned_cols=350  Identities=18%  Similarity=0.209  Sum_probs=277.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHH--HHHhCC-CCCCC-CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIV--DAVRSG-KFNCY-ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~--~~~~~~-~~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ...+|||+.|.|... .+|.++.+.+++.  +.+..+ ....| +++.|.+++|+++++++      ++++++|++|+|+
T Consensus        24 ~~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~   96 (423)
T 3ez1_A           24 RGLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNS   96 (423)
T ss_dssp             HTCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSC
T ss_pred             CCceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCc
Confidence            456799999987521 1456667777775  444422 24689 88899999999999998      6788999999999


Q ss_pred             HHHHH--HHHHHhcC--C---------CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh--cCCc
Q 014769          117 KQAVE--VILSVLAR--P---------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA--DKNT  181 (419)
Q Consensus       117 ~~al~--~~~~~l~~--~---------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~  181 (419)
                      ++++.  .++++++.  +         ||+|++++|+|..+...++..|.+++.++++++   ++|++.|++++  .+++
T Consensus        97 ~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~  173 (423)
T 3ez1_A           97 SLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV  173 (423)
T ss_dssp             HHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence            99998  88888877  7         599999999999999999999999999998643   58999999999  4567


Q ss_pred             cEEEEe-CCCCccccCCCHHHHHHHHHHH-HhCCCeEEEcccccccccCC-C--CCCCcccc----CCCCcEEEEecCCC
Q 014769          182 AAMVII-NPGNPCGNVFTYHHLQEIAEMA-RKLRVMVVADEVYGHLTFGS-I--PYTPMGLF----GSIVPVITLGSISK  252 (419)
Q Consensus       182 ~~v~i~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~-~--~~~~~~~~----~~~~~~i~~~s~sK  252 (419)
                      ++|+++ +|+||||.+++.+++++|+++| +++|+++|+||+|..+.+.+ .  ...++..+    +..+++++++||||
T Consensus       174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  253 (423)
T 3ez1_A          174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK  253 (423)
T ss_dssp             EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred             eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence            777654 8899999999999999999999 99999999999999765544 2  22233222    34567999999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc--cc-hHHHHHHHHHHHHHHHHHHH
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK--TK-EDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~~~l~~  328 (419)
                      . +++|+|+||+++++        ++++.++.... ..++++.+.|.++..+++.  .. .+++++.++.++++++.+.+
T Consensus       254 ~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~  324 (423)
T 3ez1_A          254 I-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDE  324 (423)
T ss_dssp             T-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             h-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence            8 79999999999865        67788776653 3567889999999888876  22 46777778888888888777


Q ss_pred             Hhhc----CC-CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec-CCCCC-----CCCeEEEEeec-
Q 014769          329 GVKE----IP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVG-----LKNWLRIAFCA-  396 (419)
Q Consensus       329 ~l~~----~~-~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~~Ris~~~-  396 (419)
                      .|.+    ++ ++. +..|.+|+|+|++++..      +..++. +++.++||.+.| |..|+     .++++||+++. 
T Consensus       325 ~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~-~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~  396 (423)
T 3ez1_A          325 VLRAELGEGGEYAT-WTLPKGGYFISLDTAEP------VADRVV-KLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP  396 (423)
T ss_dssp             HHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS------CHHHHH-HHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS
T ss_pred             HHHHhcCcCCCceE-EeCCCccEEEEEECCCC------cHHHHH-HHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC
Confidence            7754    32 244 44788999999998742      344444 555788999999 66665     25899999974 


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 014769          397 EPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       397 ~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +++++++++++|++++++...
T Consensus       397 ~~~~i~~~~~~l~~~l~~~~~  417 (423)
T 3ez1_A          397 PVEEVRTAMQVVAACIRLATE  417 (423)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999987654

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=1.8e-47  Score=363.71  Aligned_cols=351  Identities=18%  Similarity=0.265  Sum_probs=292.2

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV  122 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~  122 (419)
                      ++|+|+.|+|    .+++++.+.+++.+++... ...|++.  ..++|+++++++.+.+|..+++++|++|+|+++++..
T Consensus        32 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~  104 (392)
T 3b1d_A           32 QLLPAWIADM----DFEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI  104 (392)
Confidence            8999999986    3567889999998887653 3467764  7899999999998878877889999999999999999


Q ss_pred             HHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCHH
Q 014769          123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       123 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      +++++.++||+|+++.|+|+++...+...|.+++.++++++ ++|.+|++.++++++ .+++++++++|+||||.+++.+
T Consensus       105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~  184 (392)
T 3b1d_A          105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE  184 (392)
Confidence            99999999999999999999999988888999888887533 246789999999887 5678889999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      ++++|+++|+++|+++|+||+|..+.+++....++..+..  .++++++.|+||.++++|+|+||++++++       ++
T Consensus       185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~~  257 (392)
T 3b1d_A          185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------TL  257 (392)
Confidence            9999999999999999999999999887655555555543  46789999999999889999999998652       36


Q ss_pred             HHHHHhhhccc--cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCcc
Q 014769          279 IDSIKDCLSIY--SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPW  355 (419)
Q Consensus       279 ~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~  355 (419)
                      ++.++......  .++++++|.++..+|+.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~i~~~~~  335 (392)
T 3b1d_A          258 CAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMKPQGTYLIWLDFSDY  335 (392)
Confidence            66666554322  356888888888888753 467888899999999999999988 78887 45788999999888642


Q ss_pred             cccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      .    .+..++...|++++||.+.||..|+.  ++++||+++.++++|++++++|+++++
T Consensus       336 ~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          336 G----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP  391 (392)
Confidence            1    13556777776678999999998873  579999998888999999999998875

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=4.1e-43  Score=335.64  Aligned_cols=369  Identities=15%  Similarity=0.121  Sum_probs=271.9

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      .+++...+++.|..+++.+.+    ...+++|+|+.|+|.   +++.++.+.+++.++. ......|.+..|..++|+++
T Consensus        17 ~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~---d~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~lr~~i   88 (409)
T 4eu1_A           17 QGPGSMGKPDPILGLGQDFRM----DPAKRKVNLSIGVYR---DDADQPFVLECVKQAT-LGTNMDYAPVTGIASFVEEA   88 (409)
T ss_dssp             ----------CHHHHHHHHHH----CCCSSCEECCCSSCC---CTTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHHHHHH
T ss_pred             hhcCCCCCCChHHHHHHHHhh----CCCcCceeeeeeEEE---CCCCCEeecHHHHhcC-ccccccCCCCCCcHHHHHHH
Confidence            344556677777777765543    446789999999972   2333444556665553 23345898889999999999


Q ss_pred             HHHHHhhCCCCCCCCcEE--EcccHHHHHHHHH---HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc
Q 014769           94 ADYLSRDLPYKLSADDVY--VTLGCKQAVEVIL---SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV  168 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~--~t~g~~~al~~~~---~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  168 (419)
                      ++++....+..+++++|.  .|.|+++++..+.   .+++++||+|++++|+|..+...++..|.+++.+++..++++.+
T Consensus        89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  168 (409)
T 4eu1_A           89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL  168 (409)
T ss_dssp             HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred             HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence            999853222222367884  5899999988764   44568999999999999999999999999999999865567889


Q ss_pred             ChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CCCCcccc-CCCC
Q 014769          169 DLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLF-GSIV  242 (419)
Q Consensus       169 ~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~~  242 (419)
                      |++.++++++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++.  ...++..+ +..+
T Consensus       169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~  248 (409)
T 4eu1_A          169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP  248 (409)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred             cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence            9999999885   2445566799999999999999999999999999999999999999887652  11122222 3345


Q ss_pred             cEEEEecCCCcCCCCCceeEEE--EeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHH
Q 014769          243 PVITLGSISKRWLVPGWRFGWL--VTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCK  314 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~  314 (419)
                      ++++++||||.++++|+|+||+  ++.+++ ..  ..+++.++... ..+.+++.+.|.++..+++...     .+++++
T Consensus       249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  325 (409)
T 4eu1_A          249 NLIVAQSFSKNFGLYGHRCGALHISTASAE-EA--KRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQ  325 (409)
T ss_dssp             CCEEEEECTTTSSCGGGCCEEEEEECSSHH-HH--HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             cEEEEecCcccccCccCCceEEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            7899999999999999999997  554411 00  01555555543 3345677889999988887632     245778


Q ss_pred             HHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEE
Q 014769          315 LIDTLRESAEICYDGVKEIP--C-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLR  391 (419)
Q Consensus       315 ~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~R  391 (419)
                      .+++++++++.+.+.|++++  + +. +..|++|+|+|+.++          .+++.++++++||.+.||.        |
T Consensus       326 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gv~v~p~~--------R  386 (409)
T 4eu1_A          326 MSSRIAEVRKRLVSELKACGSVHDWS-HIERQVGMMAYTGLT----------REQVELLRSEYHIYMTLNG--------R  386 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTTC--------E
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCcc-eecCCceEEEEeCCC----------HHHHHHHHHcCCEEEcCCC--------E
Confidence            88999999999999998862  1 55 446889999997653          3557788888999999863        9


Q ss_pred             EEee-cCHHHHHHHHHHHHHHH
Q 014769          392 IAFC-AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       392 is~~-~~~~~l~~~l~~l~~~~  412 (419)
                      |+++ .++++++++++.|++++
T Consensus       387 i~~~~~~~~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          387 AAVSGLNSTNVEYVSQAIHNVT  408 (409)
T ss_dssp             EEGGGCCTTTHHHHHHHHHHHH
T ss_pred             EEEEecCHhhHHHHHHHHHHHh
Confidence            9995 57788999999998875

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=1.9e-43  Score=336.60  Aligned_cols=369  Identities=18%  Similarity=0.188  Sum_probs=272.9

Q ss_pred             hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Q 014769           18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY   96 (419)
Q Consensus        18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   96 (419)
                      ...+++.+..+...+..    ..++++|||+.|.+. .....++++.+.+++.+.+.......|++..|..++|++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~   81 (396)
T 2q7w_A            6 TAAPADPILGLADLFRA----DERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQEL   81 (396)
T ss_dssp             CCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCCchHHHHHHHHhc----cCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHH
Confidence            44555666666654332    236789999999842 1222466789999998887644455898889999999999999


Q ss_pred             HHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           97 LSRDLPYKLSADDVYV--TLGCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        97 l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      +....+..+++++|++  |+|++++++.+++++.  .+||+|++++|+|+++...++..|.+++.+++++++++.+|++.
T Consensus        82 ~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  161 (396)
T 2q7w_A           82 LFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDA  161 (396)
T ss_dssp             HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHH
T ss_pred             HhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHH
Confidence            9654333356889998  9999999999998764  59999999999999999999999999999988654567899999


Q ss_pred             HHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC-CCCCCccccCC-CCcEEEE
Q 014769          173 VEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFGS-IVPVITL  247 (419)
Q Consensus       173 l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-~~~~i~~  247 (419)
                      +++++++   +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ....++..+.. .++++++
T Consensus       162 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  241 (396)
T 2q7w_A          162 LINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVA  241 (396)
T ss_dssp             HHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEE
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEE
Confidence            9998864   35677889999999999999999999999999999999999999988753 11223332322 2468999


Q ss_pred             ecCCCcCCCCCceeEEEEe--eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVT--NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDTL  319 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~  319 (419)
                      +|+||.++++|+|+||+++  ++++ ..  .++++.+.... ..+.+++.++|.++.++|+...     .+++++.++++
T Consensus       242 ~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~  318 (396)
T 2q7w_A          242 SSYSXNFGLYNERVGACTLVAADSE-TV--DRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRI  318 (396)
T ss_dssp             EECTTTTTCGGGCCEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHH
T ss_pred             EeccccccccccccceEEEEcCCHH-HH--HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Confidence            9999999889999999986  3311 00  02445554432 2334568889999988887631     25677888999


Q ss_pred             HHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeec
Q 014769          320 RESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCA  396 (419)
Q Consensus       320 ~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~  396 (419)
                      +++++.+.+.|+++.   ++. +..|.+|+|+|+.++         . +++..+++++||.+.||        +||+++.
T Consensus       319 ~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gv~v~~~--------~Ris~~~  379 (396)
T 2q7w_A          319 QRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLT---------K-EQVLRLREEFGVYAVAS--------GRVNVAG  379 (396)
T ss_dssp             HHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGGG
T ss_pred             HHHHHHHHHHHHhcCCCCCcc-eecCCCceEEEecCC---------H-HHHHHHHHhcCeeecCC--------ceEEEee
Confidence            999999999999873   366 446888999998663         2 34567778899999885        5999974


Q ss_pred             -CHHHHHHHHHHHHHHH
Q 014769          397 -EPSALKDGLGRMKAFC  412 (419)
Q Consensus       397 -~~~~l~~~l~~l~~~~  412 (419)
                       +++++++++++|++++
T Consensus       380 ~~~e~i~~~~~~l~~~l  396 (396)
T 2q7w_A          380 MTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             CCTTTHHHHHHHHHHHC
T ss_pred             cCHHHHHHHHHHHHhcC
Confidence             8899999999998753

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=1.3e-42  Score=330.48  Aligned_cols=366  Identities=16%  Similarity=0.153  Sum_probs=280.8

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCC-CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTA-FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD   95 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   95 (419)
                      ....+++.++.+.....+    ..++++|||+.|.|.. .+..++++.+.+++.+.+.......|++..|..++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~   80 (394)
T 2ay1_A            5 LKPQAPDKILALMGEFRA----DPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE   80 (394)
T ss_dssp             CCCCCCCSHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred             CccCCCccHHHHHHHHHh----CCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHH
Confidence            455677778777765543    2367899999998631 12246679999999888764445689888899999999999


Q ss_pred             HHHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChH
Q 014769           96 YLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLD  171 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  171 (419)
                      ++...   ++++++|++  |+|++++++.++.++..  +||+|++++|+|+++...++..|.+++.+++++++++.+|++
T Consensus        81 ~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  157 (394)
T 2ay1_A           81 LILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFE  157 (394)
T ss_dssp             HHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHH
T ss_pred             HHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHH
Confidence            98432   236789999  99999999999988765  999999999999999999999999999998865456789999


Q ss_pred             HHHHhhcCC---ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCCccccCC-CCcEEE
Q 014769          172 AVEALADKN---TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLFGS-IVPVIT  246 (419)
Q Consensus       172 ~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~-~~~~i~  246 (419)
                      .+++++++.   +.++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+.. .+++++
T Consensus       158 ~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (394)
T 2ay1_A          158 GMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLI  237 (394)
T ss_dssp             HHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEE
T ss_pred             HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEE
Confidence            999988653   45667799999999999999999999999999999999999999877531 1112222211 246899


Q ss_pred             EecCCCcCCCCCceeEEEEe--eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHHHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLVT--NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDT  318 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~  318 (419)
                      ++|+||.++++|+|+||+++  ++++ +.  ..+.+.+.... ..+.++++++|.++.++|+...     .+++++.+++
T Consensus       238 ~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~  314 (394)
T 2ay1_A          238 AASCSKNFGIYRERTGCLLALCADAA-TR--ELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSG  314 (394)
T ss_dssp             EEECTTTTTCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             EEeccCCCcCcCCccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence            99999999889999999997  3311 00  01233333222 2234558889998888887631     2578888899


Q ss_pred             HHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee
Q 014769          319 LRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC  395 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~  395 (419)
                      ++++++.+.+.|+++.   ++. +..|.+|+|+|+.++         . +.+..+++++||.+.||        +|++++
T Consensus       315 ~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gi~v~~~--------~Ris~~  375 (394)
T 2ay1_A          315 MLRLREQLAGELRDLSGSDRFG-FVAEHRGMFSRLGAT---------P-EQVKRIKEEFGIYMVGD--------SRINIA  375 (394)
T ss_dssp             HHHHHHHHHHHHHHHHTSSTTT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGG
T ss_pred             HHHHHHHHHHHHHhcCCCCCee-EEcCCceEEEeeCCC---------H-HHHHHHHHhCCEEecCC--------CeEEee
Confidence            9999999999998762   366 446788999998764         2 34566778899999885        499996


Q ss_pred             -cCHHHHHHHHHHHHHH
Q 014769          396 -AEPSALKDGLGRMKAF  411 (419)
Q Consensus       396 -~~~~~l~~~l~~l~~~  411 (419)
                       .+++++++++++|+++
T Consensus       376 ~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          376 GLNDNTIPILARAIIEV  392 (394)
T ss_dssp             GCCTTTHHHHHHHHHHH
T ss_pred             cCCHhhHHHHHHHHHHc
Confidence             4889999999999875

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=7.7e-41  Score=315.48  Aligned_cols=332  Identities=16%  Similarity=0.229  Sum_probs=271.0

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      .|||+.|.+    .++.++.+.+++.+.+...  ....|++..+ .++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus        32 ~idl~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~  106 (369)
T 3cq5_A           32 DIRLNTNEN----PYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ  106 (369)
T ss_dssp             SEECSSCCC----CSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred             ceeccCCCC----CCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence            499999985    2567899999999887542  2357877655 89999999999988888888999999999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHH
Q 014769          122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~  200 (419)
                      .++.+++++||+|++++|+|+++...++..|.+++.++.+  .++.+|++.+++++++ ++++|++++|+||||.++|.+
T Consensus       107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~  184 (369)
T 3cq5_A          107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD  184 (369)
T ss_dssp             HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999999999999999998864  4567999999999877 789999999999999999966


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCC-cEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV-PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      ++.+|++   .+++++|+||+|+.+.++ .  ..+...+..+ +++++.|+||.++++|+|+||+++++        +++
T Consensus       185 ~l~~l~~---~~~~~li~De~~~~~~~~-~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~  250 (369)
T 3cq5_A          185 DVERIIN---VAPGIVIVDEAYAEFSPS-P--SATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI  250 (369)
T ss_dssp             HHHHHHH---HCSSEEEEECTTGGGCCS-C--CGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred             HHHHHHH---hCCCEEEEECCchhhcCC-c--chHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence            5555555   556999999999987653 1  1122223344 78999999999988999999999975        577


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.+..... .++++.+.+.++.++++.  .+++++.+++++++++.+.+.|++. ++. +. +..|.|+|++++.     
T Consensus       251 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~~~~~~~~~~~~-----  319 (369)
T 3cq5_A          251 DAVMLVRL-PYHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYA-VV-PSESNFVFFGDFS-----  319 (369)
T ss_dssp             HHHHTTSC-TTCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCE-EE-CCSSSEEEEECCS-----
T ss_pred             HHHHHcCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-EC-CCCCeEEEEECCC-----
Confidence            77776544 356888999999888876  4678888899999999999999875 776 42 5567788988761     


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                        +..++...| .++||.+.||   +.++++|++++ ++++++++++.|+++++.
T Consensus       320 --~~~~l~~~l-~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~~  367 (369)
T 3cq5_A          320 --DQHAAWQAF-LDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIKL  367 (369)
T ss_dssp             --SHHHHHHHH-HHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHTT
T ss_pred             --CHHHHHHHH-HHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence              466777776 6789999998   34689999998 688999999999988643

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=8.1e-42  Score=319.85  Aligned_cols=327  Identities=16%  Similarity=0.198  Sum_probs=261.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .++++|||+.|.+.    +++++.+.+++.+.+.  ....|+++.+ .++|+++++++      ++++++|++|+|++++
T Consensus        13 ~g~~~id~~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~a   79 (350)
T 3fkd_A           13 LSSEIVNFSTTVWT----DGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAA   79 (350)
T ss_dssp             ---CCEECSCCSCC----CSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHH
T ss_pred             ccccEEEccCCCCC----CCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence            36899999999753    5678999999988873  2457888766 89999999998      5788999999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEec-cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL-LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      +..+++++.  ||+|+++.|+|..+...++..|.+++.+++ ++.++  +++        ++++++++++|+||||.++|
T Consensus        80 l~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~  147 (350)
T 3fkd_A           80 FYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQ  147 (350)
T ss_dssp             HHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCC
Confidence            999999998  999999999999999999999999999987 43333  333        47899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      .+++.+|++.|+++  ++|+||+|..+.+++...  ...++..+++++++|+||.++++|+|+||++++.        ++
T Consensus       148 ~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--------~~  215 (350)
T 3fkd_A          148 RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--------DF  215 (350)
T ss_dssp             HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--------HH
T ss_pred             HHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeCH--------HH
Confidence            99999999888765  999999999987765432  2344455678999999999989999999999854        68


Q ss_pred             HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      ++.++.... .++++.+.+.++..+|+... .+.++..+.. ++++.+.+.|+++|++. + .|..+.|+|+.++..   
T Consensus       216 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~~---  287 (350)
T 3fkd_A          216 MKRVAAFST-PWAVNALAIEAAKFILIHPA-QFTLPIRKWQ-RNTVDFITALNRLDGVE-V-HPSGTTFFLLRLKKG---  287 (350)
T ss_dssp             HHHHHTTCC-TTCSCHHHHHHHHHHHHCTT-TTCCCHHHHH-HHHHHHHHHHHHSTTEE-E-CCCSSSEEEEEESSS---
T ss_pred             HHHHHHhCC-CCCCCHHHHHHHHHHHhCHH-HHHHHHHHHH-HHHHHHHHHHhcCCCcE-E-CCCCCcEEEEECCCC---
Confidence            888877654 46788999999999888632 2333333333 88888999998888887 4 455677888888742   


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                         +..++...|++++||.+.||..|+.  ++++||+++ ++++++++++.|+++.+++
T Consensus       288 ---~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~~  342 (350)
T 3fkd_A          288 ---TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEKY  342 (350)
T ss_dssp             ---CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC-
T ss_pred             ---CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHHh
Confidence               5678888886658999999998875  689999998 5677788888888877654

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=6.2e-41  Score=315.06  Aligned_cols=331  Identities=18%  Similarity=0.275  Sum_probs=267.3

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      +++++|+|+.|.+    .+++++.+.+++.+.+...  ....|+++ +..++|+++++++      ++++++|++|+|++
T Consensus        24 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~   92 (360)
T 3hdo_A           24 DIASWIKLNTNEN----PYPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSD   92 (360)
T ss_dssp             CCTTSEECSSCCC----SSCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred             cccceeeccCCCC----CCCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence            3678999999985    3678899999999988764  14478764 6799999999999      57789999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      ++++.++.+++++||+|+++.|+|.++...++..|.+++.++++.  ++.+  +++.+.+  +++++++++|+||||.++
T Consensus        93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~  166 (360)
T 3hdo_A           93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF  166 (360)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence            999999999999999999999999999999999999999998753  3334  4444433  356899999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      |   ++++.++|+++|+++|+||+|+.+.  +.....  ..+..++++++.|+||.++++|+|+||++++.        +
T Consensus       167 ~---~~~l~~l~~~~~~~li~De~~~~~~--~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~  231 (360)
T 3hdo_A          167 P---LEYIDELARRCAGMLVLDETYAEFA--ESNALE--LVRRHENVVVTRTLSKSYSLAGMRIGLAIARP--------E  231 (360)
T ss_dssp             C---HHHHHHHHHHBSSEEEEECTTGGGS--SCCCTH--HHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--------H
T ss_pred             C---HHHHHHHHHHCCCEEEEECChHhhC--CcchhH--HhccCCCEEEEecchHhhcCCccceeeEeeCH--------H
Confidence            9   5566677789999999999999863  322222  22334578999999999999999999999854        6


Q ss_pred             HHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       278 ~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      +++.+..... .++++.+.+.++..+++.  .+++++.+++++++++.+.+.|+++ ++. + .+..|.|+|+.++.   
T Consensus       232 ~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~~~~~~---  302 (360)
T 3hdo_A          232 VIAALDKIRD-HYNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYD-V-IPSQGNYLFATPPD---  302 (360)
T ss_dssp             HHHHHHHHSC-SCCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECTT---
T ss_pred             HHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCCCccEEEEECCC---
Confidence            7888876654 367899999999999986  5778899999999999999999988 776 4 45567788887763   


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                         .+..++...| .++||.+.|+..++.++++|++++ ++++++++++.|+++-+.+-
T Consensus       303 ---~~~~~l~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~~~  356 (360)
T 3hdo_A          303 ---RDGKRVYDGL-YARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEGHH  356 (360)
T ss_dssp             ---CCHHHHHHHH-HHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC---
T ss_pred             ---CCHHHHHHHH-HHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhcccc
Confidence               2566777666 668999999887666799999998 68899999999988776543

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.1e-40  Score=308.63  Aligned_cols=322  Identities=16%  Similarity=0.217  Sum_probs=258.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      ..+++|+|+.+.+    .++++|.+.+++.+.+..  ...|++ .|..++|+++++++      ++++++|++|+|++++
T Consensus        14 ~~~~~i~l~~n~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~   80 (337)
T 3p1t_A           14 AAAQAVCLAFNEN----PEAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC   80 (337)
T ss_dssp             CCCCCEECSSCCC----CSCCCHHHHHHHHHHGGG--TTSCCT-THHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred             CCCCceEeeCCCC----CCCCCHHHHHHHHHhhhh--hccCCC-CchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence            4678999999963    256789999999988764  457854 68999999999998      6788899999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++..+  +||+|++++|+|.++...++..|.+++.++++  .++.+|++.++++  .+++++++++|+||||.++|.
T Consensus        81 l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~  154 (337)
T 3p1t_A           81 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSA  154 (337)
T ss_dssp             HHHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCH
Confidence            99999998  89999999999999999999999999998875  3568999999876  367899999999999999995


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      ++   +.++|+++++ +|+||+|+.+.+.+..  .   ....+++++++|+||.++++|+|+||++++.        +++
T Consensus       155 ~~---l~~l~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~  217 (337)
T 3p1t_A          155 GE---LDQLRQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------ELI  217 (337)
T ss_dssp             HH---HHHHHHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HHH
T ss_pred             HH---HHHHHHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HHH
Confidence            54   5555667776 6669999986644321  1   2234568999999999989999999999865        677


Q ss_pred             HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769          280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~  359 (419)
                      +.++.... .++++.+.+.++..+++.  .+++.+..+++.++++.+.+.|+++ ++. +..+.+ .|+|+..+      
T Consensus       218 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~-~~~~~~~~------  285 (337)
T 3p1t_A          218 AAMKRKQW-FCNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-VASSEA-NFVLVENA------  285 (337)
T ss_dssp             HHHHTTSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCSS-SEEEEECT------
T ss_pred             HHHHhhcC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-ECCCCC-eEEEEEcC------
Confidence            77776543 467788899999888876  3456677778888899999999988 777 435554 46666664      


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                        +..++. +++.++||.+.||..|+.++++|++++ ++++++++++.|+++.+
T Consensus       286 --~~~~~~-~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~~  335 (337)
T 3p1t_A          286 --AGERTL-RFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYSD  335 (337)
T ss_dssp             --TTHHHH-HHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred             --CHHHHH-HHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHhh
Confidence              234444 445778999999999988899999998 57888988888887653

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=1.2e-42  Score=329.83  Aligned_cols=331  Identities=18%  Similarity=0.190  Sum_probs=255.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHH--hC-CCCCCCCCCCCC-----HHHHHHHHHHHHhhCCCCCCC-CcE
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAV--RS-GKFNCYATNSGI-----PPARRAIADYLSRDLPYKLSA-DDV  110 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~--~~-~~~~~Y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~-~~i  110 (419)
                      .++++|+|+.|.|.    ++.++.+.+++.+..  .. .....|+++.|.     ++||++|++++. .+|..+.+ ++|
T Consensus        20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i   94 (391)
T 3bwn_A           20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI   94 (391)
T ss_dssp             TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence            47789999999864    455566666553322  11 134589999998     999999999997 46777777 599


Q ss_pred             EEcccHHHHHHHHHHHhcCCCC----eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEE
Q 014769          111 YVTLGCKQAVEVILSVLARPGA----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI  186 (419)
Q Consensus       111 ~~t~g~~~al~~~~~~l~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i  186 (419)
                      ++|+|+++++..++++++++||    +|++++|+|..+...++..|.+++.++++.+ +  +.        .++++++++
T Consensus        95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l  163 (391)
T 3bwn_A           95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV  163 (391)
T ss_dssp             EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred             EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence            9999999999999999999999    9999999999999999999999888887542 1  22        246889999


Q ss_pred             eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      ++||||||.+++     +|++.+..+++++|+||+|..    + ...++..  ..+++++++||||.|+++|+|+||+++
T Consensus       164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~  231 (391)
T 3bwn_A          164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV  231 (391)
T ss_dssp             ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred             CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence            999999999996     344422223399999999973    2 2223322  345789999999999999999999997


Q ss_pred             eCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc---------hHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769          267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK---------EDFFCKLIDTLRESAEICYDGVKEIPCI  336 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~~~~~  336 (419)
                      .+       +++++.+..... ..++++.+.|.++..+|+...         .+++++.++.++++++.+.+.|++++++
T Consensus       232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  304 (391)
T 3bwn_A          232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF  304 (391)
T ss_dssp             CC-------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred             cC-------HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            32       157777777653 346789999999999997642         4678899999999999999999988666


Q ss_pred             CCCCC-------------CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeecCHHHHH
Q 014769          337 SCPNK-------------PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCAEPSALK  402 (419)
Q Consensus       337 ~~~~~-------------p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~~~~~l~  402 (419)
                      .+. .             |.+|+|+|++++.        . +++..+++++||.+.||+.|+. ++++|||++.++++++
T Consensus       305 ~~~-~p~~~~~~f~~~~~~~~g~~~~~~~~~--------~-~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~  374 (391)
T 3bwn_A          305 TLP-KYPEAFCNYFGKSLESYPAFAWLGTKE--------E-TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFN  374 (391)
T ss_dssp             ECC-CCCCEEETTTTEEECCCCSEEEEEESS--------S-CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHH
T ss_pred             ccc-cCCccccccccccCCCcceEEEecCCc--------H-HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHH
Confidence            522 3             3456689998863        1 2345666889999999999986 7899999988899999


Q ss_pred             HHHHHHHHHHHHH
Q 014769          403 DGLGRMKAFCQRH  415 (419)
Q Consensus       403 ~~l~~l~~~~~~~  415 (419)
                      +++++|++++++.
T Consensus       375 ~~~~~L~~~~~~~  387 (391)
T 3bwn_A          375 VFLERLANMKLIK  387 (391)
T ss_dssp             HHHHHHHSCC---
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999887653

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=7.3e-42  Score=327.59  Aligned_cols=331  Identities=15%  Similarity=0.128  Sum_probs=265.4

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh-CCC-CCCCCCCC-C---CHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR-SGK-FNCYATNS-G---IPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~-~~~-~~~Y~~~~-g---~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +..+|+|+.|+|.    ++.++.+.+++.+.+. .+. ...|+++. |   ..+||++|++|+.+..+..+++++|++|+
T Consensus        55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~  130 (427)
T 2hox_A           55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV  130 (427)
T ss_dssp             TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred             CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence            4568999999863    5667788888887763 222 22499888 9   99999999999988777668899999999


Q ss_pred             cHHHHHHHHHHHh--------cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEE
Q 014769          115 GCKQAVEVILSVL--------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI  186 (419)
Q Consensus       115 g~~~al~~~~~~l--------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i  186 (419)
                      |+++++..++.++        +++||.|+++.|+|..+...++..|.+++.        +.+|++.|+++++++++++++
T Consensus       131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~k~v~l  202 (427)
T 2hox_A          131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEMV  202 (427)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEEE
T ss_pred             CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee--------ecCCHHHHHHhhcCCceEEEE
Confidence            9999999999999        899999999999999999999999987653        346778888888777899999


Q ss_pred             eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      ++|+||||.+++ +.+       +  ++..+.|++|.    +  +..++..+. .+++++++||||.++++|+|+||+++
T Consensus       203 ~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~----~--~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~  265 (427)
T 2hox_A          203 TSPNNPEGLLRH-AVI-------K--GCKSIYDMVYY----W--PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI  265 (427)
T ss_dssp             ESSCTTTCCCCC-CSS-------T--TCEEEEECTTC----S--TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred             cCCCCCcccccH-HHH-------c--CCCEEEeeccc----C--CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence            999999999999 422       2  55677777664    2  122333333 45789999999999999999999999


Q ss_pred             eCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHccc----------chHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKT----------KEDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      +++       ++++.++.... ...+++.+.|.++..+|+..          ..+++++.+++++++++.+.+.|+++++
T Consensus       266 ~~~-------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g  338 (427)
T 2hox_A          266 KDE-------SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR  338 (427)
T ss_dssp             CCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred             CCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence            532       57888877654 34678899999988888753          1356778889999999999999998766


Q ss_pred             CCC-------------CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeecCHHHH
Q 014769          336 ISC-------------PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCAEPSAL  401 (419)
Q Consensus       336 ~~~-------------~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~~~~~l  401 (419)
                      +.+             +..|.+|+|+|++++.       +..+++..+++++||.+.||..|+. ++++|||++.++++|
T Consensus       339 ~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l  411 (427)
T 2hox_A          339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDF  411 (427)
T ss_dssp             EECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHH
T ss_pred             ccccccccccccccccccCCCCceEEEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHH
Confidence            552             1246679999999873       2455677887889999999999986 789999998899999


Q ss_pred             HHHHHHHHHHHHH
Q 014769          402 KDGLGRMKAFCQR  414 (419)
Q Consensus       402 ~~~l~~l~~~~~~  414 (419)
                      ++++++|++++++
T Consensus       412 ~~~l~~l~~~~~~  424 (427)
T 2hox_A          412 DQLMYYLKDMVKA  424 (427)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998754

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=1.4e-39  Score=302.65  Aligned_cols=316  Identities=19%  Similarity=0.261  Sum_probs=254.0

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      +++|+|+.|.+.    ++.++.+.+++.+.+.......|++ .+..++|+++++++.+.   .+++++|++|+|+++++.
T Consensus        19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~   90 (335)
T 1uu1_A           19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY   90 (335)
T ss_dssp             CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred             CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence            468999999853    4678999999998874333457866 47999999999999532   367889999999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769          122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      .+++++   ||+|+++ |+|+++...++..|.+++.++++  .++.+|++.+     +++++|++++|+||||.++|.++
T Consensus        91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~  159 (335)
T 1uu1_A           91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE  159 (335)
T ss_dssp             HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred             HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence            999999   8999999 99999999999999999888764  3467787776     46888999999999999999888


Q ss_pred             HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769          202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS  281 (419)
Q Consensus       202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  281 (419)
                      +++|+++|   | ++|+||+|+.+.+.  +.  +..++..+++++++|+||.++++|+|+||+++++        ++++.
T Consensus       160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~~  223 (335)
T 1uu1_A          160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KFIDA  223 (335)
T ss_dssp             HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--------HHHHH
T ss_pred             HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeCH--------HHHHH
Confidence            88888876   7 89999999986532  21  2223444578999999999988999999999954        57777


Q ss_pred             HHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCC
Q 014769          282 IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN  361 (419)
Q Consensus       282 l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~  361 (419)
                      ++.... .++++.+.|.++.++++.  .+++++.+++++++++.+.+.|+++ ++. + .|.+|+|+|++++.      .
T Consensus       224 l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~------~  291 (335)
T 1uu1_A          224 YNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFVFMEK------E  291 (335)
T ss_dssp             HHHHSC-TTCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECCT------H
T ss_pred             HHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCCCeEEEEECCC------C
Confidence            776543 357889999999999986  4678888999999999999999887 666 4 46667899998863      1


Q ss_pred             CHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769          362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF  411 (419)
Q Consensus       362 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  411 (419)
                      +..++...|+ ++||.+.|+     ++++|++++. ++++++++++|+++
T Consensus       292 ~~~~~~~~l~-~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          292 EKERLLEHLR-TKNVAVRSF-----REGVRITIGK-REENDMILRELEVF  334 (335)
T ss_dssp             HHHHHHHHHH-HHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHH-HCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence            3556777775 579999983     5799999975 56799999988754

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=5.7e-38  Score=298.92  Aligned_cols=337  Identities=15%  Similarity=0.121  Sum_probs=263.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      ++++|||+.|+|   +.+++++.+.+++.+.+...  ....|.++.|..++++++++++.+.+|.    +++++|+|+++
T Consensus        42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~  114 (398)
T 3a2b_A           42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQ  114 (398)
T ss_dssp             TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHH
T ss_pred             CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHH
Confidence            567899999976   23557889999998887542  2335666778889999999998886663    58999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCCCCccc
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPCG  194 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG  194 (419)
                      ++..+++++.++||.|++++|+|..+...+...|.+++.+++       +|++.+++.+++    +++++++++|+||||
T Consensus       115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG  187 (398)
T 3a2b_A          115 SNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG  187 (398)
T ss_dssp             HHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred             HHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence            999999999999999999999999999999999999988874       478899988876    678899999999999


Q ss_pred             cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769          195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDPNGIF  273 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  273 (419)
                      .+.+   +++|.++|+++|+++|+||+|+.+.++.........++..++ +++++|+||.++.+|   ||+++++     
T Consensus       188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~-----  256 (398)
T 3a2b_A          188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA-----  256 (398)
T ss_dssp             CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH-----
T ss_pred             CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH-----
Confidence            9998   899999999999999999999987664222111112222233 599999999998778   9999864     


Q ss_pred             chhhHHHHHHhh-h-ccccCCchHHHH-HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769          274 QKSGIIDSIKDC-L-SIYSDIPTFIQG-AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV  350 (419)
Q Consensus       274 ~~~~~~~~l~~~-~-~~~~~~~~~~~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  350 (419)
                         ++++.+... . ....+.+.+.|. ++..+++.  .+++++.+++++++++.+.+.|+++ ++. +..|. |+++|+
T Consensus       257 ---~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-g~~~~~  328 (398)
T 3a2b_A          257 ---DVIDFLKHNARSVMFSASMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDH-GFD-LGATE-SPILPI  328 (398)
T ss_dssp             ---HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHT-TCC-BCSCC-SSEEEE
T ss_pred             ---HHHHHHHHhcccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhc-CCC-cCCCC-CCEEEE
Confidence               577777664 2 223344455555 45567765  2446678889999999999999988 777 43454 688999


Q ss_pred             ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .++..     .+..++...|++ +||.+.||..|..   .+++|++++  .+++++++++++|+++++++.
T Consensus       329 ~~~~~-----~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~  393 (398)
T 3a2b_A          329 FIRSN-----EKTFWVTKMLQD-DGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE  393 (398)
T ss_dssp             ECCCH-----HHHHHHHHHHHH-TTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred             EcCCH-----HHHHHHHHHHHH-CCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence            88632     135677777755 4999999988863   579999997  489999999999999998754

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=100.00  E-value=4.7e-36  Score=285.21  Aligned_cols=318  Identities=13%  Similarity=0.111  Sum_probs=250.1

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLP  137 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vlv~  137 (419)
                      +.++.+.+++.+.+..    .|++.  ..++++.+++++.+.+|.  +++ +|++|+|+++++..++.+++++||+|+++
T Consensus        44 ~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~  115 (393)
T 1vjo_A           44 NAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG  115 (393)
T ss_dssp             CCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence            5678888877665432    46542  457778888887776664  567 89999999999999999999999999999


Q ss_pred             CCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769          138 RPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV  214 (419)
Q Consensus       138 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  214 (419)
                      +|+|++  +...++..|.+++.+++++  ++.+|++.|++++++ +++++++++|+||||.+.+   +++|.++|+++|+
T Consensus       116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  190 (393)
T 1vjo_A          116 VAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGT  190 (393)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTC
T ss_pred             cCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCC
Confidence            999998  8888889999999998754  457899999999987 8899999999999999998   8999999999999


Q ss_pred             eEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh---------
Q 014769          215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC---------  285 (419)
Q Consensus       215 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~---------  285 (419)
                      ++|+||+|+..    .....+   ...+..+++.|+||.++.+| |+||+++++        ++++.++..         
T Consensus       191 ~li~Dea~~~g----~~~~~~---~~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~~~  254 (393)
T 1vjo_A          191 LLLVDTVTSLG----GVPIFL---DAWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWYL  254 (393)
T ss_dssp             EEEEECTTTTT----TSCCCT---TTTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCSTT
T ss_pred             EEEEECCcccc----CcCCcc---cccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCceec
Confidence            99999999932    112222   22334588999999988887 999999975        566666431         


Q ss_pred             -----------hcccc-CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEe
Q 014769          286 -----------LSIYS-DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG---SMVTMV  350 (419)
Q Consensus       286 -----------~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~  350 (419)
                                 ....+ +++.+.+.++..+++.....++++.+++++++++.+.+.|+++ ++. +..|.+   +.++++
T Consensus       255 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~  332 (393)
T 1vjo_A          255 DMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLS-LHVEKEYRLPTLTTV  332 (393)
T ss_dssp             CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCGGGBCSSEEEE
T ss_pred             CcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCccccCCcEEEE
Confidence                       01123 6788888888888876433457888899999999999999988 777 335543   356777


Q ss_pred             ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHH
Q 014769          351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~  412 (419)
                      .++..     .+..++...|++++||.+.||..|..++++||++ +  ++++++++++++|++++
T Consensus       333 ~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          333 CIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             ECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EcCCC-----CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence            77531     2567788888665699999999887789999995 3  56778999999999876

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=4.6e-36  Score=287.74  Aligned_cols=336  Identities=13%  Similarity=0.183  Sum_probs=253.7

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC------CCCCCCC--CCCCHHHHHHHHHHHHhhCCCCC-CCCcEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG------KFNCYAT--NSGIPPARRAIADYLSRDLPYKL-SADDVY  111 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~  111 (419)
                      ++++|+|+.|.+.     +.++.+.+++.+.+...      ....|++  ..+..++|+++++++      +. ++++|+
T Consensus        26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~------~~~~~~~v~   94 (420)
T 1t3i_A           26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI------NARSPREIV   94 (420)
T ss_dssp             TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc------CCCCCCeEE
Confidence            3558999999864     45688999999887642      1224543  457789999999998      44 678999


Q ss_pred             EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      +|+|+++++..++.++    .++||+|++++|+|++    +...++..|.+++.++++  .++.+|++.+++++++++++
T Consensus        95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~  172 (420)
T 1t3i_A           95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL  172 (420)
T ss_dssp             EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred             EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence            9999999999999999    8899999999999998    456667789999988875  45678999999999888899


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      |++++|+||||.+++   +++|.++|+++|+++|+|++|+.+..    ...+..++   ..+++.|+||.++.+|  +||
T Consensus       173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~~---~di~~~s~sK~~~~~g--~G~  240 (420)
T 1t3i_A          173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLID---CDWLVASGHKMCAPTG--IGF  240 (420)
T ss_dssp             EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHHT---CSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhcC---CCEEEEehhhhcCCCc--eEE
Confidence            999999999999999   89999999999999999999986432    11222222   4588899999877777  999


Q ss_pred             EEeeCCCCccchhhHHHHHHhhhc---------------------cccCCchHHHHHHH-HHHcccchHHHHHHHHHHHH
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDCLS---------------------IYSDIPTFIQGAIP-QILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~~  321 (419)
                      +++++        ++++.++....                     +..+.+.+.+.++. .+++.....++++..+++++
T Consensus       241 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~  312 (420)
T 1t3i_A          241 LYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE  312 (420)
T ss_dssp             EEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EEEch--------HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            99865        56666654321                     11234444454433 24443222346778889999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCC-----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCC
Q 014769          322 SAEICYDGVKEIPCISCPNKPE-----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKN  388 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~p~-----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~  388 (419)
                      +++.+.+.|++++++.++ .|.     .+.++++.++.      .+..++... +.++||.+.||..|        +..+
T Consensus       313 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~g~~~  384 (420)
T 1t3i_A          313 LTHYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNVAG------LHASDVATM-VDQDGIAIRSGHHCTQPLHRLFDASG  384 (420)
T ss_dssp             HHHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEETT------BCHHHHHHH-HHTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred             HHHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEECC------CCHHHHHHH-HHHCCeEEeeccccchHHHHhcCCCC
Confidence            999999999998787743 443     24444556653      145666654 47789999999644        3368


Q ss_pred             eEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          389 WLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       389 ~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      ++||+++  .++++++++++.|+++++++.+
T Consensus       385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~  415 (420)
T 1t3i_A          385 SARASLYFYNTKEEIDLFLQSLQATIRFFSD  415 (420)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred             eEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            9999996  4899999999999999987643

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.3e-35  Score=279.71  Aligned_cols=322  Identities=14%  Similarity=0.093  Sum_probs=252.1

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR  138 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~  138 (419)
                      +.++.+.+++.+.+.    ..|++.  ..++++.+++++.+.+|.. +++++++|+|+++++..++.+++++||+|++++
T Consensus        30 ~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~  102 (386)
T 2dr1_A           30 ACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTI  102 (386)
T ss_dssp             CCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEc
Confidence            456777777655442    245542  3678888888888777755 467899999999999999999999999999999


Q ss_pred             CCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh--cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769          139 PGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA--DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV  214 (419)
Q Consensus       139 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  214 (419)
                      |+|++  +...+...|.+++.+++++  ++.+|++.|++++  .+++++|++++|+||||.+.+   +++|.++|+++|+
T Consensus       103 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  177 (386)
T 2dr1_A          103 IGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDK  177 (386)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred             CCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCC
Confidence            99998  8888888999999998754  4678999999998  457899999999999999998   8999999999999


Q ss_pred             eEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH-----------
Q 014769          215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK-----------  283 (419)
Q Consensus       215 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~-----------  283 (419)
                      ++|+|++|+.+.+.    .++..   .+.++++.|+||.++.++ ++||+++++        ++++.++           
T Consensus       178 ~li~D~a~~~~~~~----~~~~~---~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~~  241 (386)
T 2dr1_A          178 LVFVDAVSAMGGAD----IKFDK---WGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFDI  241 (386)
T ss_dssp             EEEEECTTTBTTBC----CCTTT---TTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTCH
T ss_pred             eEEEEccccccCcc----ccccc---cCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEeH
Confidence            99999999975432    12222   234689999999977662 399999965        4555542           


Q ss_pred             -----hh---hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ceEEEEee
Q 014769          284 -----DC---LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKPE---GSMVTMVK  351 (419)
Q Consensus       284 -----~~---~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~~  351 (419)
                           ..   ....++++.+.+.++..+++..... .+++.+++++++++.+.+.|+++ ++.+. .|.   .+.++|+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~  319 (386)
T 2dr1_A          242 PLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDIL-AEPGHESPTITAVL  319 (386)
T ss_dssp             HHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCTTCBCSSEEEEE
T ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeC-cCccccCCceEEEE
Confidence                 11   1224567888888888888753222 47788899999999999999988 77733 453   36788888


Q ss_pred             cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++..     .+..++..+|+++ ||.+.||..+...+++||+++  .+++++++++++|+++++++.
T Consensus       320 ~~~~-----~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  380 (386)
T 2dr1_A          320 TPPG-----IKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK  380 (386)
T ss_dssp             CCTT-----CCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCC-----CCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            8632     2567788887655 999999987766789999996  689999999999999998764

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=1.4e-35  Score=283.11  Aligned_cols=333  Identities=14%  Similarity=0.160  Sum_probs=251.4

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCC------CCCCCCCHHHHHHHHHHHHhhCCCCC-CCCcEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNC------YATNSGIPPARRAIADYLSRDLPYKL-SADDVY  111 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~  111 (419)
                      |++++.|+.+.+.     +.++.+.+++.+.+....  ...      |.+..+..++|+++++++      +. ++++|+
T Consensus        21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~   89 (406)
T 1kmj_A           21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI------NARSAEELV   89 (406)
T ss_dssp             TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc------CCCCCCeEE
Confidence            4568999999863     356889999998886431  111      224457789999999998      44 578999


Q ss_pred             EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      +|+|+++++..++.++    .++||+|+++.|+|++..    ..+...|.+++.+++++  ++.+|++.+++++++++++
T Consensus        90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~  167 (406)
T 1kmj_A           90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL  167 (406)
T ss_dssp             EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred             EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence            9999999999999999    889999999999998643    34667799999888753  4678999999999888899


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      |++++|+||||.++|   +++|.++|+++|+++|+|++|+.+..    ...+..+   +..+++.|+||.++.+|  +||
T Consensus       168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~~~---~~d~~~~s~~K~~g~~G--~G~  235 (406)
T 1kmj_A          168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQAL---DCDFYVFSGHKLYGPTG--IGI  235 (406)
T ss_dssp             EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCccccc---CCCEEEEEchhccCCCC--cEE
Confidence            999999999999999   99999999999999999999986321    1122222   34588999999987777  899


Q ss_pred             EEeeCCCCccchhhHHHHHHhhhc----------------------cccCCchHHHHHHH-HHHcccchHHHHHHHHHHH
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDCLS----------------------IYSDIPTFIQGAIP-QILEKTKEDFFCKLIDTLR  320 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~  320 (419)
                      +++++        ++++.++....                      +..+.+.+.+.++. .+++.....++++..++++
T Consensus       236 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~  307 (406)
T 1kmj_A          236 LYVKE--------ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ  307 (406)
T ss_dssp             EEECH--------HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             EEEeH--------HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            99864        56666654321                      11223444444333 4555432345678888899


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCCeE
Q 014769          321 ESAEICYDGVKEIPCISCPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKNWL  390 (419)
Q Consensus       321 ~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~~  390 (419)
                      ++++.+.+.|+++|++.++ .|  .++++.| .++.      .+..++...| .++||.+.||..|        +.++++
T Consensus       308 ~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~-~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~i  378 (406)
T 1kmj_A          308 NLMHYALSQLESVPDLTLY-GPQNRLGVIAF-NLGK------HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMC  378 (406)
T ss_dssp             HHHHHHHHHHTTSTTEEEE-SCTTCCSEEEE-EETT------CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEE
T ss_pred             HHHHHHHHHHhcCCCeEEe-cCCCcCCEEEE-EECC------CCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeE
Confidence            9999999999998787733 55  5666554 5642      1456676555 7789999998753        346899


Q ss_pred             EEEeec--CHHHHHHHHHHHHHHHHHH
Q 014769          391 RIAFCA--EPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       391 Ris~~~--~~~~l~~~l~~l~~~~~~~  415 (419)
                      ||+++.  ++++++++++.|+++++.+
T Consensus       379 Ris~~~~~t~~~i~~~~~~l~~~~~~l  405 (406)
T 1kmj_A          379 RASLAMYNTHEEVDRLVTGLQRIHRLL  405 (406)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence            999963  8999999999999998764

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=3.8e-35  Score=279.44  Aligned_cols=334  Identities=14%  Similarity=0.118  Sum_probs=247.7

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC----C--CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF----N--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~----~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +.++|||+.|+|-   .++.++.+.+++.+.+.....    .  .|+...+..++++.+++++      +.+ +.|++++
T Consensus        42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------~~~-~~i~~~s  111 (399)
T 3tqx_A           42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL------GTD-DTILYSS  111 (399)
T ss_dssp             TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH------TCS-EEEEESC
T ss_pred             CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH------CCC-cEEEECc
Confidence            4568999999642   235678899999888764111    1  1223334688899999887      222 4555555


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeC
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~  188 (419)
                       +++++..++.+++++||.|+++.|+|..+...++..|.++..++.       .|++.+++.+++      +++++++++
T Consensus       112 -Gt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~  183 (399)
T 3tqx_A          112 -CFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG  183 (399)
T ss_dssp             -HHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred             -hHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence             578999999999999999999999999999999999999888874       366777777765      788999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      |+||||.++|   +++|.++|+++|+++|+||+|+...++..........+. ..+.++++|+||.++  |++.||++++
T Consensus       184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~  258 (399)
T 3tqx_A          184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH  258 (399)
T ss_dssp             EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred             CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence            9999999999   999999999999999999999743333222111222221 234589999999976  4555999986


Q ss_pred             CCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      +        ++++.+....   ..+.+.+...+.++...++... ++.++.+++++++++.+.+.|+++ ++. +. +..
T Consensus       259 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~~  326 (399)
T 3tqx_A          259 K--------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQ-LV-PGN  326 (399)
T ss_dssp             H--------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCC-BC-CCS
T ss_pred             H--------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCC-cC-CCC
Confidence            5        5777776542   2234667777777777776521 557888899999999999999987 777 42 445


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      |.++|+.++..     .+..++..+|++ +||.+.|+..+..   .+++|++++  .+++++++++++|+++++++
T Consensus       327 ~~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  396 (399)
T 3tqx_A          327 HPIIPVMLGDA-----QLATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL  396 (399)
T ss_dssp             SSEEEEEEECH-----HHHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence            56778877642     135677777755 7999998765532   469999995  68999999999999999875

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=3.4e-35  Score=278.21  Aligned_cols=324  Identities=14%  Similarity=0.077  Sum_probs=241.5

Q ss_pred             CChHHHHHHHHHHHhCCCC-----C--CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---
Q 014769           59 RTAVEAEDAIVDAVRSGKF-----N--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA---  128 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~-----~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---  128 (419)
                      ++++.+.+++.+.+.....     .  .|....+..++++++++++      ++++++|++|+|+++++..++.++.   
T Consensus        12 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~~~~~~   85 (384)
T 1eg5_A           12 RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCATESINWILKTVAETF   85 (384)
T ss_dssp             CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHHHHHHHHHHhhhhhc
Confidence            5688999999998875210     0  1223355688999999998      5677899999999999999999998   


Q ss_pred             -CCCCeEEeeCCCCCCcHHHH---hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769          129 -RPGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE  204 (419)
Q Consensus       129 -~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  204 (419)
                       ++||+|++++|+|+++...+   ...|.+++.+++++  ++.+|++.|+++++++++++++++|+||||.++|   +++
T Consensus        86 ~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~  160 (384)
T 1eg5_A           86 EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQP---VED  160 (384)
T ss_dssp             TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHH
T ss_pred             cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCCCCcccccC---HHH
Confidence             79999999999999875555   67799998888753  4679999999999888899999999999999999   789


Q ss_pred             HHHHHHhCC--CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769          205 IAEMARKLR--VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI  282 (419)
Q Consensus       205 i~~~~~~~~--~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l  282 (419)
                      |.++|+++|  +++|+|++|+.   +. ....+..+   +..+++.|+||.++.+|  +||++++++-.+      ...+
T Consensus       161 i~~l~~~~~~~~~li~Dea~~~---~~-~~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~~~~~------~~~~  225 (384)
T 1eg5_A          161 VTRIVKKKNKETLVHVDAVQTI---GK-IPFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRKGVPI------RPLI  225 (384)
T ss_dssp             HHHHHHHHCTTCEEEEECTTTT---TT-SCCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECTTSCC------CCSB
T ss_pred             HHHHHHhcCCceEEEEEhhhhc---CC-cccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcCCCcc------cccc
Confidence            999999999  99999999983   22 11122222   34588999999988778  899999763100      1111


Q ss_pred             Hhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEeecCccc
Q 014769          283 KDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG--SMVTMVKLNPWL  356 (419)
Q Consensus       283 ~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~~~~~~  356 (419)
                      ...    ....++++.+.+.++..+++.. .+++++.+++++++++.+.+.|++ +++.++..+.+  +.++++.++.  
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~--  301 (384)
T 1eg5_A          226 HGGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPN--  301 (384)
T ss_dssp             CSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTT--
T ss_pred             ccCcccccccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCC--
Confidence            110    1134567888888888888752 346788889999999999999988 47763322222  3455666652  


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                          .+..++...| .++||.+.+|..|+.                   .+++||+++  .+++++++++++|+++++++
T Consensus       302 ----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  376 (384)
T 1eg5_A          302 ----IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL  376 (384)
T ss_dssp             ----CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             ----CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence                1466777666 678999999887642                   368999997  68999999999999999876


Q ss_pred             hc
Q 014769          416 TK  417 (419)
Q Consensus       416 ~~  417 (419)
                      .+
T Consensus       377 ~~  378 (384)
T 1eg5_A          377 DL  378 (384)
T ss_dssp             --
T ss_pred             Hh
Confidence            43

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=100.00  E-value=7.9e-35  Score=276.71  Aligned_cols=332  Identities=14%  Similarity=0.082  Sum_probs=251.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK  117 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~  117 (419)
                      ....++++.|.      +++++.+.+++.+.+..    .|.+  ..+..++++.+++++      +.+++ +|++|+|++
T Consensus        17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t   80 (393)
T 2huf_A           17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGH   80 (393)
T ss_dssp             CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHH
T ss_pred             CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHH
Confidence            45667777773      35678888887765533    2322  246678999999988      45665 899999999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccc
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCG  194 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG  194 (419)
                      +++..++.++.++||+|++++|+|+++  ...++..|.+++.+++++  ++.+|++.+++++++ ++++|++++|+||||
T Consensus        81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG  158 (393)
T 2huf_A           81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG  158 (393)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred             HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence            999999999999999999999999874  234566799999998754  356899999999987 889999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc-CCCCCceeEEEEeeCCCCcc
Q 014769          195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR-WLVPGWRFGWLVTNDPNGIF  273 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~  273 (419)
                      .++|   +++|.++|+++|+++|+|++++...    ....+..   .+..+++.|+||+ ++.+|+  ||+++++     
T Consensus       159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~---~~~d~~~~s~sK~l~g~~G~--G~~~~~~-----  221 (393)
T 2huf_A          159 VLQG---LEGVGALCHQHNCLLIVDTVASLGG----APMFMDR---WEIDAMYTGSQKVLGAPPGI--TPVSFSH-----  221 (393)
T ss_dssp             EECC---CTTHHHHHHHTTCEEEEECTTTBTT----BCCCTTT---TTCSEEECCSSSTTCCCSSC--EEEEECH-----
T ss_pred             ccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCcchhh---cCccEEEECCCcccccCCCe--EEEEECH-----
Confidence            9999   8999999999999999999987421    1112222   2345888999997 446775  9999864     


Q ss_pred             chhhHHHHHHhhh----c--------------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769          274 QKSGIIDSIKDCL----S--------------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       274 ~~~~~~~~l~~~~----~--------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  329 (419)
                         ++++.++...    .                    ..++++...+.++..+++......+++..++++++++.+.+.
T Consensus       222 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~  298 (393)
T 2huf_A          222 ---RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRG  298 (393)
T ss_dssp             ---HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence               5677665430    1                    113456666666666666532234778888999999999999


Q ss_pred             hhcCCCCCCCCCCC---ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHH
Q 014769          330 VKEIPCISCPNKPE---GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKD  403 (419)
Q Consensus       330 l~~~~~~~~~~~p~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~  403 (419)
                      |+++ ++.++ .|.   .+++++++++..     .+..++...|++++||.+.+|..+...+++|+++ +  ++++++++
T Consensus       299 L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~  371 (393)
T 2huf_A          299 LQDA-GFELY-ADPKDRLSTVTTIKVPQG-----VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDR  371 (393)
T ss_dssp             HHHT-TCCBS-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHH
T ss_pred             HHHc-CCeec-cCccccCCcEEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHH
Confidence            9988 77733 442   345777877531     2567788888766799999998876788999999 6  46889999


Q ss_pred             HHHHHHHHHHHHhc
Q 014769          404 GLGRMKAFCQRHTK  417 (419)
Q Consensus       404 ~l~~l~~~~~~~~~  417 (419)
                      ++++|+++++++.+
T Consensus       372 ~~~~l~~~~~~~~~  385 (393)
T 2huf_A          372 VLQVFQEAVAAVKP  385 (393)
T ss_dssp             HHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999987654

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=6.4e-35  Score=276.52  Aligned_cols=329  Identities=14%  Similarity=0.106  Sum_probs=246.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CC---CCCC--CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK---FNCY--ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +..+|||+.|.+   +.+++++.+.+++.+.+.. +.   ...|  +...+..++|+++++++      +++ +.+++++
T Consensus        38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i~~~s  107 (384)
T 1bs0_A           38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL------GYS-RALLFIS  107 (384)
T ss_dssp             TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH------TCS-EEEEESC
T ss_pred             CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh------CCC-cEEEeCC
Confidence            667899999864   2345678999999988764 21   1223  44567789999999998      333 4455555


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC---ccEEEEeCCCC
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN---TAAMVIINPGN  191 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~n  191 (419)
                      | ++++..++.++.++||.|+++.|+|..+...+...|.+++.++.       .|++.+++.+++.   ++++++++|+|
T Consensus       108 G-t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n  179 (384)
T 1bs0_A          108 G-FAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS  179 (384)
T ss_dssp             H-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             c-HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            5 89999999999999999999999999988888889999888763       4788898887653   67778889999


Q ss_pred             ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      |||.+++   +++|.++|+++|+++|+||+|+.+.++.........++. ...++++|+||.++.+|   ||+++++   
T Consensus       180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~---  249 (384)
T 1bs0_A          180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSS---  249 (384)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECH---
T ss_pred             CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCH---
Confidence            9999999   889999999999999999999876543111111112222 23388999999988766   9999864   


Q ss_pred             ccchhhHHHHHHhhh-c--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769          272 IFQKSGIIDSIKDCL-S--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT  348 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  348 (419)
                           ++++.++... .  .+.+++++.+.++.++++.....+.++.+++++++++.+.+.|+++ ++. + .+..+.++
T Consensus       250 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~  321 (384)
T 1bs0_A          250 -----TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSAIQ  321 (384)
T ss_dssp             -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSSBC
T ss_pred             -----HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCCCEE
Confidence                 5777776542 1  2235778888777777765221266788899999999999999987 666 4 34566677


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeec--CHHHHHHHHHHHHHH
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCA--EPSALKDGLGRMKAF  411 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~--~~~~l~~~l~~l~~~  411 (419)
                      |+.++..     .+..++...|+ ++||.+.|+..|+.   .+++|++++.  +++++++++++|+++
T Consensus       322 ~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          322 PLIVGDN-----SRALQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             CEEEESH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEeCCH-----HHHHHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            8877531     13566777775 45999999988753   3789999963  899999999999864

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=100.00  E-value=1.2e-33  Score=268.79  Aligned_cols=319  Identities=16%  Similarity=0.111  Sum_probs=233.7

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHh---C-CCCCCCCCCCCCH---HHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVR---S-GKFNCYATNSGIP---PARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~---~-~~~~~Y~~~~g~~---~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ..+++.|+|.    ++.++.+.+++.+.++   . .....|+. .|.+   ++++++++++      +.  +++++++|+
T Consensus        20 ~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~------g~--~~~i~~~~g   86 (404)
T 1e5e_A           20 DQFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE------KT--EACVATSSG   86 (404)
T ss_dssp             CTTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH------TC--SEEEEESSH
T ss_pred             CCCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh------CC--CcEEEeCCh
Confidence            3567888764    4444444444444332   2 22346877 5777   8999999998      22  378888888


Q ss_pred             HHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769          117 KQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP  192 (419)
Q Consensus       117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np  192 (419)
                      ++++..++.+++++||+|+++.|+|.++..    .++..|.+++.++++       |++.+++++++++++|++++|+||
T Consensus        87 ~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Np  159 (404)
T 1e5e_A           87 MGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANP  159 (404)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTT
T ss_pred             HHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCC
Confidence            999999999999999999999999998877    678889999888753       778999999888999999999999


Q ss_pred             cccCCCHHHHHHHHHHHHh-CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCC
Q 014769          193 CGNVFTYHHLQEIAEMARK-LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPN  270 (419)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~  270 (419)
                      ||.+++   +++|.++|++ +|+++|+|++|..+.+.    .++ .+   +.++++.|+||.++++|+|+ ||+++++  
T Consensus       160 tG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~--  226 (404)
T 1e5e_A          160 TLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA--  226 (404)
T ss_dssp             TCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--
T ss_pred             CCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH--
Confidence            999998   9999999999 99999999999987653    122 22   35689999999999999998 9999875  


Q ss_pred             CccchhhHHH-HHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-------------
Q 014769          271 GIFQKSGIID-SIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP-------------  334 (419)
Q Consensus       271 ~~~~~~~~~~-~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-------------  334 (419)
                            ++++ .++.....  ....++..+.++...++.     +....++..++.+.+.+.|++.+             
T Consensus       227 ------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~  295 (404)
T 1e5e_A          227 ------DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDH  295 (404)
T ss_dssp             ------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSS
T ss_pred             ------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCC
Confidence                  5666 77765443  345678888888777764     23333344455555555555432             


Q ss_pred             -CCCCCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-----------------------
Q 014769          335 -CISCPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-----------------------  386 (419)
Q Consensus       335 -~~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----------------------  386 (419)
                       ++. +..|    .++++.| +++.        ..+.+.+++++.|| +.+|..|+.                       
T Consensus       296 p~~~-~~~~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~  364 (404)
T 1e5e_A          296 EGHD-IAKKQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREA  364 (404)
T ss_dssp             TTHH-HHHHHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHH
T ss_pred             ccHH-HHHhhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHh
Confidence             222 1112    2666666 7752        33445667788899 566665542                       


Q ss_pred             ----CCeEEEEeecCHHHHHHHHHHHHHHHHHHhccC
Q 014769          387 ----KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH  419 (419)
Q Consensus       387 ----~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~~  419 (419)
                          ++++|||++.  |+++++++.|++++....+.|
T Consensus       365 ~g~~~~~iRis~g~--e~~~~li~~l~~al~~~~~~~  399 (404)
T 1e5e_A          365 AGITDGMIRLSVGI--EDADELIADFKQGLDALLRSH  399 (404)
T ss_dssp             TTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHHCC-
T ss_pred             cCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHHHhc
Confidence                5799999988  789999999999998776543

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=3.3e-34  Score=275.29  Aligned_cols=338  Identities=17%  Similarity=0.145  Sum_probs=249.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CC-CCCCCCCCCC----HHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK-FNCYATNSGI----PPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~Y~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      +|+++|||+.|++   ..+..++.+.+++.+++.. +. ...|....|.    .++++.+++++      +.  ++++++
T Consensus        62 ~g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~------g~--~~~i~~  130 (427)
T 2w8t_A           62 RGKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY------GT--TGAIVF  130 (427)
T ss_dssp             TTEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH------TC--SEEEEE
T ss_pred             CCceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh------CC--CceEEe
Confidence            3567899999974   2345788999999988764 21 2233333444    77888888877      22  356666


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCC
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINP  189 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p  189 (419)
                      +++++++..++.+++++||.|+++.|+|..+...+...|.+++.++.       .|++.|++++++    ++++|++++|
T Consensus       131 ~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~  203 (427)
T 2w8t_A          131 STGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGV  203 (427)
T ss_dssp             SCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred             cCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence            66677999999999999999999999999999999999998887763       488999988865    6788899999


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      +||||.+.+   +++|.++|+++|+++|+||+|+.+.++.........++. .+.+++++|+||.++++|   ||+++++
T Consensus       204 ~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~  277 (427)
T 2w8t_A          204 YSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH  277 (427)
T ss_dssp             ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred             CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence            999999999   999999999999999999999998775322211111221 234688999999987666   9999865


Q ss_pred             CCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769          269 PNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS  345 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  345 (419)
                              ++++.+....   ..+++.++..+.++..+++...  ..++.+++++++++.+.+.|+++ ++.+...+..|
T Consensus       278 --------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  346 (427)
T 2w8t_A          278 --------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDS  346 (427)
T ss_dssp             --------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCS
T ss_pred             --------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCC
Confidence                    3444444431   1234566666666667776522  24677888999999999999887 67633133256


Q ss_pred             EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhcc
Q 014769          346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      .++|+.++..     .+..++...|++ +||.+.|+..|+.   .+++|++++  .+++++++++++|+++++++.+.
T Consensus       347 ~~~~~~~~~~-----~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~  418 (427)
T 2w8t_A          347 AIVAVMLEDQ-----EQAAMMWQALLD-GGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVI  418 (427)
T ss_dssp             SEEEEEESSH-----HHHHHHHHHHHH-TTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEEECCH-----HHHHHHHHHHHH-CCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCcc
Confidence            6888888632     135567777755 5999999988764   368999996  48999999999999999887543

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=100.00  E-value=3.3e-35  Score=278.96  Aligned_cols=330  Identities=15%  Similarity=0.136  Sum_probs=246.8

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC---CC---CCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK---FN---CYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~---~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      ++++.|+.+.+     .+.++.+.+++.+.+....   ..   .|+. ..+..++|+++++++      ++++++|++|+
T Consensus        15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~   83 (390)
T 1elu_A           15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD   83 (390)
T ss_dssp             TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred             CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence            45789988863     2456788899888775421   01   3443 357789999999998      56778999999


Q ss_pred             cHHHHHHHHHHHh-cCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769          115 GCKQAVEVILSVL-ARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       115 g~~~al~~~~~~l-~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      |+++++..++.++ .++||+|+++.|+|+++...    ++..|.+++.++++++.++.+|++.+++++++++++|++++|
T Consensus        84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~  163 (390)
T 1elu_A           84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL  163 (390)
T ss_dssp             SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred             ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence            9999999999999 78999999999999986543    466799999998764356788999999999888899999999


Q ss_pred             CCccccCCCHHHHHHHHHHHH----hCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE
Q 014769          190 GNPCGNVFTYHHLQEIAEMAR----KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV  265 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  265 (419)
                      +||||.++|   +++|.++|+    ++|+++|+|++|+...    ....+   ......+++.|+||. ..+|.++||++
T Consensus       164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~---~~~~~d~~~~s~~K~-~~~~~g~G~~~  232 (390)
T 1elu_A          164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDF---SRLEVDYYAFTGHKW-FAGPAGVGGLY  232 (390)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCT---TTSCCSEEEEESSST-TCCCTTCEEEE
T ss_pred             ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCCh---hhcCCCEEEcccccc-ccCCCceEEEE
Confidence            999999999   899999999    9999999999998532    11122   222345889999994 45667799999


Q ss_pred             eeCCCCccchhhHHHHHHhh-----------------------hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHH
Q 014769          266 TNDPNGIFQKSGIIDSIKDC-----------------------LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRE  321 (419)
Q Consensus       266 ~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~  321 (419)
                      +++        ++++.++..                       ....++++...+.++..+++.... .++++..+++++
T Consensus       233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~  304 (390)
T 1elu_A          233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQ  304 (390)
T ss_dssp             ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            975        233333321                       111345566777766666654222 347888899999


Q ss_pred             HHHHHHHHhhcCCCCCCCC--CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cC
Q 014769          322 SAEICYDGVKEIPCISCPN--KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AE  397 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~--~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~  397 (419)
                      +++.+.+.|++++++.++.  .+.++++ +++++..     .+..++...| .++||.+.+|.   .++++||+++  .+
T Consensus       305 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~---~~~~iRis~~~~~~  374 (390)
T 1elu_A          305 RSEFLWRGLNQLPHVHCLATSAPQAGLV-SFTVDSP-----LGHRAIVQKL-EEQRIYLRTIA---DPDCIRACCHYITD  374 (390)
T ss_dssp             HHHHHHHHHHHSTTEEESCSSCCSSSEE-EEEECSS-----SCHHHHHHHH-HHTTEECEEET---TTTEEEEECCTTCC
T ss_pred             HHHHHHHHHHhcCCcEEecCccccccEE-EEEcCCC-----CCHHHHHHHH-HHCCEEEEecC---CCCeEEEecccCCC
Confidence            9999999999887877332  1245544 4577531     2466777777 56799999986   3579999984  68


Q ss_pred             HHHHHHHHHHHHHH
Q 014769          398 PSALKDGLGRMKAF  411 (419)
Q Consensus       398 ~~~l~~~l~~l~~~  411 (419)
                      ++++++++++|+++
T Consensus       375 ~~~i~~~~~~l~~~  388 (390)
T 1elu_A          375 EEEINHLLARLADF  388 (390)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998753

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=100.00  E-value=1.7e-34  Score=275.12  Aligned_cols=335  Identities=16%  Similarity=0.108  Sum_probs=245.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CC-----CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      |.++++|..++..   .++.+|.+.+++.+.+.. ..     ...|+...+..++|+++++++      +. +++|++++
T Consensus        45 g~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~-~~~i~~~s  114 (401)
T 2bwn_A           45 KQDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH------QK-EAALVFSS  114 (401)
T ss_dssp             EEEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT------TC-SEEEEESC
T ss_pred             CCcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh------CC-CcEEEECC
Confidence            4556888876532   244567899999988764 11     123556567899999999998      22 57888887


Q ss_pred             cHHHHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeC
Q 014769          115 GCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~  188 (419)
                      |++ ++..++..+.  .+||.|+++.|+|+.+...++..|.+++.++.+       |++.+++.++    +++++|++++
T Consensus       115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~  186 (401)
T 2bwn_A          115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  186 (401)
T ss_dssp             HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence            776 7777766654  589999999999999988888899998888752       6777877765    4688999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      |+||||.++|   +++|.++|+++|+++|+||+|+.+.++..+...+...+. ...+++++|+||.++++|   ||++++
T Consensus       187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~  260 (401)
T 2bwn_A          187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  260 (401)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence            9999999999   899999999999999999999965553222111111121 123588999999998888   999885


Q ss_pred             CCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      .        ++++.++...   ....+.+++.+.++..+++......+++.+++++++++.+.+.|+++ ++. +..+.+
T Consensus       261 ~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~  330 (401)
T 2bwn_A          261 A--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-IIDHGS  330 (401)
T ss_dssp             H--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BCCCSS
T ss_pred             H--------HHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCC
Confidence            4        5666665432   22233445677777777765333445778889999999999999887 777 335655


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC---CeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      + ++|+.++..     .+..++...|++++||.+.|+..|+.+   +++|++++  .+++++++++++|+++++++
T Consensus       331 ~-~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~  400 (401)
T 2bwn_A          331 H-IVPVVIGDP-----VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC  400 (401)
T ss_dssp             S-CEEEECCCH-----HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred             C-eEEEEeCCh-----HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence            5 778888631     135667777766789999999877643   58999996  58999999999999887653

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=100.00  E-value=3.5e-34  Score=272.19  Aligned_cols=321  Identities=14%  Similarity=0.034  Sum_probs=239.8

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR  138 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~  138 (419)
                      +.++.+++++.+.+..  ...|....+..++|+++++++      +.++++|++|+|+++++..++.++.++||+|++++
T Consensus        19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~   90 (392)
T 2z9v_A           19 NAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLA   90 (392)
T ss_dssp             CCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEE
T ss_pred             CCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEec
Confidence            5678888887766543  111222345678888998887      45678999999999999999999999999999999


Q ss_pred             CCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769          139 PGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV  214 (419)
Q Consensus       139 p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  214 (419)
                      |+|+++  ...+...|.+++.+++++  ++.+|++.++++++  +++++|++++|+||||.+++   +++|.++|+++|+
T Consensus        91 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  165 (392)
T 2z9v_A           91 SGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDAIGALVSAHGA  165 (392)
T ss_dssp             SSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHHHHHHHHHTTC
T ss_pred             CCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHHHHHHHHHcCC
Confidence            999875  344455799999998754  34689999999884  47889999999999999999   8899999999999


Q ss_pred             eEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhh--------
Q 014769          215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------  285 (419)
Q Consensus       215 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------  285 (419)
                      ++|+|++|+...    ....+..+   +..+++.|+||++ +.+|  +||+++++        ++++.++..        
T Consensus       166 ~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~~~g--~G~l~~~~--------~~~~~l~~~~~g~~~~~  228 (392)
T 2z9v_A          166 YLIVDAVSSFGG----MKTHPEDC---KADIYVTGPNKCLGAPPG--LTMMGVSE--------RAWAKMKANPLAPRASM  228 (392)
T ss_dssp             EEEEECTTTBTT----BSCCGGGG---TCSEEEECSSSTTCCCSC--CEEEEECH--------HHHHHHHTCTTSCCSST
T ss_pred             eEEEEcccccCC----cccccccc---cceEEEecCcccccCCCc--eeEEEECH--------HHHHHhhhccCCCCcee
Confidence            999999998522    11122222   2348889999963 3345  59999865        566666431        


Q ss_pred             -------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEEE
Q 014769          286 -------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSMVT  348 (419)
Q Consensus       286 -------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~  348 (419)
                                   ....++++...+.++..+++......+++.+++++++++.+.+.|+++ ++.++ .|.    .+.++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~  306 (392)
T 2z9v_A          229 LSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVW-AASDSIASPTTT  306 (392)
T ss_dssp             TCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGBCTTEE
T ss_pred             ccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCCccccCCceE
Confidence                         011344566666666666654222226778889999999999999887 77743 422    46677


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHHh
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++.++..     .+..++..+|.+++||.+.+|..+...+++|+++ +  .+++++++++++|+++++++.
T Consensus       307 ~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~  372 (392)
T 2z9v_A          307 AVRTPDG-----VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG  372 (392)
T ss_dssp             EEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred             EEECCCC-----CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence            8887531     2567788777665699999998776688999996 4  689999999999999998765

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=100.00  E-value=2.7e-34  Score=273.29  Aligned_cols=321  Identities=13%  Similarity=0.111  Sum_probs=244.4

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCC-C-CCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYAT-N-SGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVL  135 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~-~-~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vl  135 (419)
                      ++++.+.+++.+.+..    .|.+ + ....++|+++++++      +.+++ +|++|+|+++++..++.++.++||+|+
T Consensus        28 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl   97 (396)
T 2ch1_A           28 NCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRVL   97 (396)
T ss_dssp             CCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEE
Confidence            4567777776554321    3433 1 23689999999998      55677 899999999999999999999999999


Q ss_pred             eeCCCCCCcH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769          136 LPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL  212 (419)
Q Consensus       136 v~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  212 (419)
                      +++|+|+++.  ..++..|.+++.+++++  ++.+|++++++++++ ++++|++++|+||||.+++   +++|.++|+++
T Consensus        98 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~  172 (396)
T 2ch1_A           98 IAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQH  172 (396)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred             EEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHHc
Confidence            9999999874  46788899999998753  567999999999887 7899999999999999999   88999999999


Q ss_pred             CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------
Q 014769          213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------  285 (419)
Q Consensus       213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------  285 (419)
                      |+++|+|++|+..    .....+..++   ..+++.|++|.++ .+.++|++++++        ++++.++..       
T Consensus       173 ~~~li~Dea~~~g----~~~~~~~~~~---~d~~~~s~~K~~~-~~~g~g~~~~~~--------~~~~~~~~~~~~~~~~  236 (396)
T 2ch1_A          173 DCLLIVDAVASLC----GVPFYMDKWE---IDAVYTGAQKVLG-APPGITPISISP--------KALDVIRNRRTKSKVF  236 (396)
T ss_dssp             TCEEEEECTTTBT----TBCCCTTTTT---CCEEECCCC-CCC-CCSSCEEEEECH--------HHHHHHHTCSSCCSCG
T ss_pred             CCEEEEEcccccc----CCccchhhcC---cCEEEEcCCcccc-CCCCeEEEEECH--------HHHHhhhhccCcccce
Confidence            9999999999842    1122222222   2366789999743 334579998864        455555321       


Q ss_pred             -----------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc----
Q 014769          286 -----------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG----  344 (419)
Q Consensus       286 -----------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~----  344 (419)
                                       ....++++...+.++..+++....+++++..++++++++.+.+.|+++ ++.++ .+.+    
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~  314 (396)
T 2ch1_A          237 YWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIF-VKDPRHRL  314 (396)
T ss_dssp             GGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBS-SCSGGGBC
T ss_pred             EechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeec-cCCccccC
Confidence                             112245677788888778775334567888899999999999999987 77733 4544    


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +.+++++++..     .+..++..+|++++||.+.+|..+..++++||++ +  .+++++++++++|+++++++.+
T Consensus       315 ~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~  385 (396)
T 2ch1_A          315 PTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP  385 (396)
T ss_dssp             TTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred             CceEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence            24778877531     2567888888776799999988766678999999 4  3789999999999999988754

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=100.00  E-value=1.1e-35  Score=280.33  Aligned_cols=326  Identities=11%  Similarity=0.069  Sum_probs=240.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHH-HHHHHHhhCCCCCCCCcEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRA-IADYLSRDLPYKLSADDVY  111 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~-ia~~l~~~~~~~~~~~~i~  111 (419)
                      +++++.|+.|.+.    .++++.+.+++.+.+....        ...|.+..+..++++. +++++      +.+  +|+
T Consensus         6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~------~~~--~v~   73 (371)
T 2e7j_A            6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL------GCD--VAR   73 (371)
T ss_dssp             --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT------TSS--EEE
T ss_pred             CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc------CCC--EEE
Confidence            5578888887532    3567899999988775431        1234556789999999 99998      333  999


Q ss_pred             EcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEe--ccCCCCcccChHHHHHhhc-----CCccEE
Q 014769          112 VTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD--LLPERNWEVDLDAVEALAD-----KNTAAM  184 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~-----~~~~~v  184 (419)
                      +|+|+++++..++.++.++||+|++++|+|+++...+...|.+++.++  ++  .++.+|++.|+++++     ++++++
T Consensus        74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v  151 (371)
T 2e7j_A           74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLA  151 (371)
T ss_dssp             EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEE
T ss_pred             EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEE
Confidence            999999999999999999999999999999999888999999999988  54  346799999999887     678899


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      ++++|+||||.+++   +++|.++|+++|+++|+|++|+.+...    .++..++.   .+++.|+||.++.+ .|+||+
T Consensus       152 ~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~~---di~~~s~sK~~~~~-~~~G~~  220 (371)
T 2e7j_A          152 LITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIGA---DFIVGSGHKSMAAS-GPIGVM  220 (371)
T ss_dssp             EEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHTC---SEEEEEHHHHSSCC-SSCEEE
T ss_pred             EEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcCC---CEEEecCCcCCCCC-CCcEEE
Confidence            99999999999999   799999999999999999999985431    12223332   38899999986654 599999


Q ss_pred             EeeCCCCccchhhHHHH-HHhhhc---c-----ccCCchHHHHHHHHHHcccchHHHHHHHHHH--HHHHHHHHHHhhcC
Q 014769          265 VTNDPNGIFQKSGIIDS-IKDCLS---I-----YSDIPTFIQGAIPQILEKTKEDFFCKLIDTL--RESAEICYDGVKEI  333 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~-l~~~~~---~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~  333 (419)
                      +++++        +++. ++....   .     .++++...+.++..+++... .   +..+++  +++++.+.+.|+++
T Consensus       221 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~---~~~~~~~~~~~~~~l~~~L~~~  288 (371)
T 2e7j_A          221 GMKEE--------WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVR-E---RIKRWDEEVEKARRFAAEMEKL  288 (371)
T ss_dssp             EECTT--------TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHH-H---HGGGHHHHHHHHHHHHHHHHHT
T ss_pred             EEech--------hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHc
Confidence            99762        3333 333221   1     34455555656555655321 1   556677  78888899999887


Q ss_pred             CCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC------CCeEE-EEee---cCHHHH
Q 014769          334 PCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL------KNWLR-IAFC---AEPSAL  401 (419)
Q Consensus       334 ~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~~R-is~~---~~~~~l  401 (419)
                       ++..+ .|.  .+.++|++++        +..++...| .++||.+.| ..+..      ++++| ++++   .+++++
T Consensus       289 -~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i  356 (371)
T 2e7j_A          289 -GIKQL-GDNPHNHDLMFFHAE--------VLYEISKKA-KGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEV  356 (371)
T ss_dssp             -TCEEE-SSSSCCSSEEEEECH--------HHHHHHHHS-SSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHH
T ss_pred             -CcEEe-cCCCccCceEEEECC--------CHHHHHHHH-HHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHH
Confidence             77633 443  3557888874        245666666 578999988 43322      67899 9996   689999


Q ss_pred             HHHHHHHHHHHHHH
Q 014769          402 KDGLGRMKAFCQRH  415 (419)
Q Consensus       402 ~~~l~~l~~~~~~~  415 (419)
                      ++++++|+++++++
T Consensus       357 ~~~~~~l~~~~~~~  370 (371)
T 2e7j_A          357 DYVLNAFKEIIEKY  370 (371)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999998764

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=4.6e-34  Score=272.22  Aligned_cols=332  Identities=14%  Similarity=0.123  Sum_probs=250.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CCC---CCCC--CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GKF---NCYA--TNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      ++..+|||+.|+|-   .++.++.+.+++.+.+.. +..   ..|.  ...+..++|+++++++      +.+ +.|+++
T Consensus        43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i~~~  112 (401)
T 1fc4_A           43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAILYS  112 (401)
T ss_dssp             TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEEEES
T ss_pred             CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEEEeC
Confidence            47789999999641   122578999999888764 211   1222  2456789999999998      444 555555


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEe
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVII  187 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~  187 (419)
                      + +++++..++++++++||.|+++.|+|..+...+...|.+++.++.       .|++.+++.+++      ++++|+++
T Consensus       113 s-Gs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~  184 (401)
T 1fc4_A          113 S-CFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             C-HHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             C-hHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence            5 477999999999999999999999998888888888999887762       477888887764      67899999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccc-cccc-CCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEE
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTF-GSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWL  264 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~  264 (419)
                      +|+||||.+++   +++|.++|+++|+++|+||+|+ ++.+ .+........+.. +.+++++|+||.+ +.+|   ||+
T Consensus       185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~  257 (401)
T 1fc4_A          185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT  257 (401)
T ss_dssp             SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred             CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence            99999999999   8999999999999999999996 6553 3333222122222 3458899999997 5554   999


Q ss_pred             EeeCCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769          265 VTNDPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK  341 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  341 (419)
                      ++++        ++++.+....   ..+.+++.+.+.++..+++..  +..++.+++++++++.+.+.|+++ ++. + .
T Consensus       258 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~  324 (401)
T 1fc4_A          258 AARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV--EAGSELRDRLWANARQFREQMSAA-GFT-L-A  324 (401)
T ss_dssp             EECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHT-TCC-B-C
T ss_pred             EcCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-c
Confidence            9854        5777776543   124577888888888887652  124677888899999999999988 777 4 2


Q ss_pred             CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       342 p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      |..++++|+.++..     .+..++...|. ++||.+.++..|+.   .+++|++++  .+++++++++++|+++++++
T Consensus       325 ~~~~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  397 (401)
T 1fc4_A          325 GADHAIIPVMLGDA-----VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             CSSSSEEEEEEECH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEEcCCh-----HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence            66788889888531     13556776764 56999999987764   358999996  68999999999999999875

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=100.00  E-value=1.2e-33  Score=264.32  Aligned_cols=318  Identities=14%  Similarity=0.097  Sum_probs=237.5

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP  137 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~  137 (419)
                      .++++.+++++.+.+..  ...|....+..++|+++++++      +.+++++++|+|+++++..++.++.++||+|+++
T Consensus        10 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~   81 (352)
T 1iug_A           10 VRLHPKALEALARPQLH--HRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP   81 (352)
T ss_dssp             CCCCHHHHHHHHSCCCC--TTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCHHHHHHhccCCCC--ccCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence            46678898988876642  112222345688999999998      5567899999999999999999999999999999


Q ss_pred             CCCCCCcH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC--C
Q 014769          138 RPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL--R  213 (419)
Q Consensus       138 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~  213 (419)
                      +|+|+++.  ..+...|.+++.++++.  ++.+|++.+++   ++++++++++|+||||.+++   +++|.++|+++  |
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~  153 (352)
T 1iug_A           82 VYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE  153 (352)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred             eCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence            99999864  44566799999998754  34678887766   57889999999999999999   88999999999  9


Q ss_pred             CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH---------HH-
Q 014769          214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS---------IK-  283 (419)
Q Consensus       214 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~---------l~-  283 (419)
                      +++|+|++|+...    ....+..+   +..+++.|+||+++.+ .++||+++++        ++++.         ++ 
T Consensus       154 ~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~-~g~G~~~~~~--------~~~~~~~~~~~~~~~~~  217 (352)
T 1iug_A          154 GLVGADMVTSLLV----GEVALEAM---GVDAAASGSQKGLMCP-PGLGFVALSP--------RALERLKPRGYYLDLAR  217 (352)
T ss_dssp             CEEEEECTTTBTT----BCCCSGGG---TCSEEEEESSSTTCCC-SCEEEEEECH--------HHHHTCCCCSSTTCHHH
T ss_pred             CEEEEECCccccC----cceecccc---CeeEEEecCcccccCC-CceeEEEECH--------HHHHHhhCCCceeeHHH
Confidence            9999999997421    11122222   2347889999953332 3489999865        33322         11 


Q ss_pred             ---hh--hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-ceEEEEeecCcccc
Q 014769          284 ---DC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE-GSMVTMVKLNPWLL  357 (419)
Q Consensus       284 ---~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~g~~~~~~~~~~~~  357 (419)
                         ..  ....++++...+.++..+++..... +++.+++++++++.+.+.|+++ ++. +..|. .+.++|++++..  
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~--  292 (352)
T 1iug_A          218 ELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLR-PVPKRFSPAVAAFYLPEG--  292 (352)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCE-ESCSSBCTTCEEEECCTT--
T ss_pred             HHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCc-ccccccCCeEEEEEcCCC--
Confidence               11  1224566777777777777653323 7788899999999999999987 777 43553 677888888631  


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                         .+..++...|. ++||.+.+|..+..++++|++++  .+++++++++++|++++++..
T Consensus       293 ---~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  349 (352)
T 1iug_A          293 ---VPYARVKEAFA-QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL  349 (352)
T ss_dssp             ---CCHHHHHHHHH-TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred             ---CCHHHHHHHHH-HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence               25677877775 56999999985545789999996  478999999999999988763

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=100.00  E-value=1.9e-33  Score=269.78  Aligned_cols=333  Identities=15%  Similarity=0.168  Sum_probs=243.5

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC------------CCCCHHHHHHHHHHHHhhCCCCCC
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT------------NSGIPPARRAIADYLSRDLPYKLS  106 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~------------~~g~~~lr~~ia~~l~~~~~~~~~  106 (419)
                      ..++++|.|..+.+.     ++++.+.+++.+.+....  .|+.            ..+..++++.+++++      +.+
T Consensus        18 ~~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~   84 (423)
T 3lvm_A           18 RAMKLPIYLDYSATT-----PVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GAD   84 (423)
T ss_dssp             --CCSSEECBTTTCC-----CCCHHHHHHHTTSSSTTS--CCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCC
T ss_pred             cccCCCEeecCCCcC-----CCCHHHHHHHHHHHhhcc--cccCCCccccchhHHHHHHHHHHHHHHHHHc------CCC
Confidence            357888888877642     567889898887765111  2221            123367888888887      567


Q ss_pred             CCcEEEcccHHHHHHHHHHHhcC----CCCeEEeeCCCCCCcHHHH---hhcCCEEEEEeccCCCCcccChHHHHHhhcC
Q 014769          107 ADDVYVTLGCKQAVEVILSVLAR----PGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADK  179 (419)
Q Consensus       107 ~~~i~~t~g~~~al~~~~~~l~~----~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~  179 (419)
                      +++|++|+|+++++..++.++.+    +||+|+++.|+|+++...+   ...|.+++.+++++  ++.+|++.|++++++
T Consensus        85 ~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~  162 (423)
T 3lvm_A           85 PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD  162 (423)
T ss_dssp             GGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred             CCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC
Confidence            78999999999999999998874    7999999999999887666   44599999988754  567899999999998


Q ss_pred             CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCc
Q 014769          180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW  259 (419)
Q Consensus       180 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  259 (419)
                      +++++++++|+||||.++|   +++|.++|+++|+++|+|++|+....    ...+..+   +..+++.|+||.++.+| 
T Consensus       163 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~sK~~g~~g-  231 (423)
T 3lvm_A          163 DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PIDLSQL---KVDLMSFSGHKIYGPKG-  231 (423)
T ss_dssp             TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTS---CCSEEEEESTTTTSCSS-
T ss_pred             CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcChhhc---CCCEEEechHHhcCCCC-
Confidence            8899999999999999999   88899999999999999999876221    1122222   24488899999876666 


Q ss_pred             eeEEEEeeCCCCccchhhHHHHHHhhh--------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          260 RFGWLVTNDPNGIFQKSGIIDSIKDCL--------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       260 r~G~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                       +|+++++++.        .+.+....        ...++++...+.++..+++.. ..++++..++++++++.+.+.|+
T Consensus       232 -~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~  301 (423)
T 3lvm_A          232 -IGALYVRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIK  301 (423)
T ss_dssp             -CEEEEECBTT--------BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -eEEEEEeccc--------cCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence             8999987531        11222211        113455666666666666542 23478888999999999999999


Q ss_pred             cCCCCCCCCCCCc---eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCe
Q 014769          332 EIPCISCPNKPEG---SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNW  389 (419)
Q Consensus       332 ~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~  389 (419)
                      ++|++.++ .+.+   +.++++.++.      .+..++...| .+  |.+.+|..|..                   .++
T Consensus       302 ~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~  371 (423)
T 3lvm_A          302 DIEEVYLN-GDLEHGAPNILNVSFNY------VEGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSS  371 (423)
T ss_dssp             TSTTEEEE-SCSTTBCTTEEEEEETT------SCHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTE
T ss_pred             cCCCEEEe-CCccccCCCeEEEEeCC------CCHHHHHHHH-hh--heeccCccccCCCccccHHHHHhCCCccccCce
Confidence            88887744 3332   2344444532      2456666655 44  88999876543                   389


Q ss_pred             EEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          390 LRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       390 ~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +||+++  .++++++++++.|+++++++.+
T Consensus       372 iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~  401 (423)
T 3lvm_A          372 IRFSLGRFTTEEEIDYTIELVRKSIGRLRD  401 (423)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence            999995  4789999999999999987754

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=100.00  E-value=3.9e-33  Score=263.91  Aligned_cols=326  Identities=13%  Similarity=0.056  Sum_probs=239.8

Q ss_pred             CChHHHHHHHHHHHhCCC--C-CCCCC----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---
Q 014769           59 RTAVEAEDAIVDAVRSGK--F-NCYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA---  128 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~--~-~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---  128 (419)
                      ++++.+++++.+.+....  . ..|..    ..+..++|+++++++      +.++++|++|+|+++++..++.++.   
T Consensus        11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~l~~~~   84 (382)
T 4eb5_A           11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAMRN   84 (382)
T ss_dssp             CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHHHHHHHHHHHHhhc
Confidence            568999999999886421  1 11332    235677888888887      4567899999999999999999998   


Q ss_pred             -CCCCeEEeeCCCCCCcHHHHh---hcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769          129 -RPGANVLLPRPGWPYYEGIAQ---RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE  204 (419)
Q Consensus       129 -~~gd~vlv~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  204 (419)
                       ++||+|++++|+|+++...+.   ..|.+++.+++++  ++.+|++.++++++++++++++++|+||||.+++   +++
T Consensus        85 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~  159 (382)
T 4eb5_A           85 ARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEE  159 (382)
T ss_dssp             GGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHH
T ss_pred             cCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HHH
Confidence             899999999999998765554   3689999988753  4578999999999888889999999999999999   889


Q ss_pred             HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH-H
Q 014769          205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI-K  283 (419)
Q Consensus       205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l-~  283 (419)
                      |.++|+++|++ |+|++|+..    .....+..+   +..+++.|+||.++.+|  +||++++++..+.   ...... .
T Consensus       160 i~~l~~~~~~~-i~D~a~~~g----~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~---~~~~~~~~  226 (382)
T 4eb5_A          160 ISEVLAGKAAL-HIDATASVG----QIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGGGQ  226 (382)
T ss_dssp             HHHHHTTSSEE-EEECTTTBT----TBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETTCCCC---CSSCSSCT
T ss_pred             HHHHHHHCCCE-EEEcchhcC----CcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccccccC---ceecCCCc
Confidence            99999999999 999999842    111122222   23488899999876666  7999987642111   000000 0


Q ss_pred             hhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEeecCcccccCC
Q 014769          284 DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG---SMVTMVKLNPWLLEDI  360 (419)
Q Consensus       284 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~  360 (419)
                      ......++++...+.++..+++.. .+++++.+++++++++.+.+.|+++|++.++ .|.+   +.++++.++.      
T Consensus       227 ~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~------  298 (382)
T 4eb5_A          227 ENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFSY------  298 (382)
T ss_dssp             GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEETT------
T ss_pred             cccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCcccCCCCEEEEEeCC------
Confidence            001123455666666666666543 2457888899999999999999988777633 4431   4456777652      


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .+..++...| .++||.+.+|..|..                   .+++||+++  .+++++++++++|+++++++.+
T Consensus       299 ~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  375 (382)
T 4eb5_A          299 IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             SCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            2466777777 567999999876432                   479999996  5899999999999999987754

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=9.4e-33  Score=263.82  Aligned_cols=332  Identities=12%  Similarity=0.093  Sum_probs=243.3

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--C----CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--F----NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~----~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      +|+.++||+.+++   ..++.+|.+.+++.+++....  .    ..|+......++++++++++      +.  +..+++
T Consensus        57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~--~~~i~~  125 (409)
T 3kki_A           57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT------GF--DECLLS  125 (409)
T ss_dssp             CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH------TC--SEEEEE
T ss_pred             CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh------CC--CeEEEe
Confidence            3677899988764   245678999999999987621  1    12333345678999999887      22  234555


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCc
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNP  192 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~np  192 (419)
                      +++++++..++.+++++||.|++++|+|..+...+...|.+++.++.       .|++++++++.+ +++++++++|+||
T Consensus       126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~np  198 (409)
T 3kki_A          126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYST  198 (409)
T ss_dssp             SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTT
T ss_pred             cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence            66679999999999999999999999999998889999999887753       478999998875 5789999999999


Q ss_pred             cccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       193 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      ||.+.+   +++|.++|+++|+++|+||+|+.+.++..+.......+. .+..+++.|+||.++++|   ||+++++   
T Consensus       199 tG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~---  269 (409)
T 3kki_A          199 LGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN---  269 (409)
T ss_dssp             TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS---
T ss_pred             CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH---
Confidence            999999   999999999999999999999985553222111111121 123488999999987664   9998865   


Q ss_pred             ccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769          272 IFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT  348 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  348 (419)
                           ++++.+....   ......++..+.++.+.++..  +..++.+++++++++.+.+.|+++ ++. + . ..++++
T Consensus       270 -----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~-~~~~~~  338 (409)
T 3kki_A          270 -----EVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLT-I-R-SESQII  338 (409)
T ss_dssp             -----SGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCC-C-C-CSSSEE
T ss_pred             -----HHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-C-CCCCEE
Confidence                 2344443321   123345666666666666542  223677888999999999999988 666 3 2 467788


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      |+.++..     .+..++...|++ +||.+.|+..+..   .+++|++++  .+++++++++++|++++++.
T Consensus       339 ~~~~~~~-----~~~~~~~~~L~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~  404 (409)
T 3kki_A          339 GLETGDE-----RNTEKVRDYLES-NGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG  404 (409)
T ss_dssp             EEEEESH-----HHHHHHHHHHHH-TTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred             EEEeCCH-----HHHHHHHHHHHH-CCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence            8877632     124567777755 5999988665432   479999995  58999999999999998763

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=1.1e-32  Score=262.15  Aligned_cols=320  Identities=12%  Similarity=0.039  Sum_probs=237.3

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC--------
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP--------  130 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~--------  130 (419)
                      ++++.+.+++.+.+..... .|....+..++++.+++++.+.+|  .++++|++|+|+++++..++.++..+        
T Consensus        41 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~  117 (397)
T 3f9t_A           41 NVLPITRKIVDIFLETNLG-DPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKG  117 (397)
T ss_dssp             CCCTHHHHHHHHHTTCCTT-SGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhc
Confidence            4567889999888765321 222222445666666666666555  46789999999999999999998766        


Q ss_pred             -----CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHH
Q 014769          131 -----GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQE  204 (419)
Q Consensus       131 -----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~  204 (419)
                           ||+|+++.|+|+++...++..|.+++.+++++  ++.+|++.+++++++ +++++++++|+||||.+.+   +++
T Consensus       118 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~  192 (397)
T 3f9t_A          118 LSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEE  192 (397)
T ss_dssp             CCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHH
T ss_pred             ccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHH
Confidence                 99999999999999999999999999998754  467899999999988 8999999999999999998   889


Q ss_pred             HHHHHHhCCCeEEEcccccccccCCCCC--------CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          205 IAEMARKLRVMVVADEVYGHLTFGSIPY--------TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       205 i~~~~~~~~~~li~De~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      |.++|+++|+++|+|++|+.+.++....        .++ .+.. +..+++.|++|. +.+|.|+|+++++++.      
T Consensus       193 i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~~------  263 (397)
T 3f9t_A          193 LSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-DFSL-GVDSITIDPHKM-GHCPIPSGGILFKDIG------  263 (397)
T ss_dssp             HHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-SGGG-TCSEEECCTTTT-TCCCSSCEEEEESSGG------
T ss_pred             HHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-cccc-cCCeEEEccccc-cCCCCCceEEEEeCHH------
Confidence            9999999999999999998765421110        011 1111 334788899997 5678899999987632      


Q ss_pred             hHHHHHHhhhcc------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          277 GIIDSIKDCLSI------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       277 ~~~~~l~~~~~~------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                       +.+.++....+            ..+.+..++.++...+.   ...+++..++++++++.+.+.|+++ ++..+ .+..
T Consensus       264 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~  337 (397)
T 3f9t_A          264 -YKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKEN-NFKPV-IEPI  337 (397)
T ss_dssp             -GGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCCS
T ss_pred             -HHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cCCC
Confidence             22222211111            01124445555555553   4667888888999999999999988 77744 4445


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~  413 (419)
                      +.++++.++        +..++...| .++||.+.++..   ++++|++++  .+++++++++++|+++++
T Consensus       338 ~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          338 LNIVAIEDE--------DYKEVCKKL-RDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             SSEEEEECT--------THHHHHHHH-HHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred             ccEEEEEeC--------CHHHHHHHH-HhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence            556677765        356676666 556999999864   589999996  589999999999998764

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=100.00  E-value=2.9e-33  Score=264.91  Aligned_cols=319  Identities=15%  Similarity=0.136  Sum_probs=237.9

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC--CcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA--DDVYVTLGCKQAVEVILSVLARPGANVL  135 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~t~g~~~al~~~~~~l~~~gd~vl  135 (419)
                      .++++.+.+++.+.+....  .+.......++++.+++++      +.++  ++|++|+|+++++. ++..+.++||+|+
T Consensus        11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~la~~~------~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi   81 (384)
T 3zrp_A           11 TTIKEDVLVAGLENNVGFT--SKEFVEALAYSLKGLRYVM------GASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL   81 (384)
T ss_dssp             SCCCHHHHHHTTCCSCCTT--SHHHHHHHHHHHHHHHHHH------TCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred             CCCCHHHHHHhhccccccc--cHHHHHHHHHHHHHHHHHh------CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence            4567888877765543211  1111234567777888777      4455  88999999999999 9999999999999


Q ss_pred             eeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769          136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL  212 (419)
Q Consensus       136 v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  212 (419)
                      +++|+|++  +...+...|.+++.++++.  ++.+|++.+++++++ +++++++++|+||||.++|   +++|.++|+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  156 (384)
T 3zrp_A           82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY  156 (384)
T ss_dssp             EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred             EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence            99999965  5566677899999998764  456899999999987 7899999999999999999   88999999999


Q ss_pred             CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH----------
Q 014769          213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI----------  282 (419)
Q Consensus       213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l----------  282 (419)
                      |+++|+|++|+....    ...+..+   +..+++.|+||+++ ++.++||+++++        ++++.+          
T Consensus       157 ~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~-~~~g~g~~~~~~--------~~~~~~~~~~~~~~~~  220 (384)
T 3zrp_A          157 VELIVVDGVSSVGAE----EVKAEEW---NVDVYLTASQKALG-SAAGLGLLLLSP--------KALSILDSQNSIAGYY  220 (384)
T ss_dssp             EEEEEEECTTTTTTS----CCCTTTT---TCSEEEEETTSTTC-CCSSEEEEEECH--------HHHHHHHHCCCSCCST
T ss_pred             CCEEEEECcccccCc----ccccccc---CCCEEEecCccccc-CCCceEEEEECH--------HHHHHhcCCCCCCccc
Confidence            999999999985322    1122222   24488999999863 234499999865        455554          


Q ss_pred             ---Hhhh----------ccc-cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----c
Q 014769          283 ---KDCL----------SIY-SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----G  344 (419)
Q Consensus       283 ---~~~~----------~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~  344 (419)
                         ....          ... ++++...+.++..+++......+++..++++++++.+.+.|+++ ++.++ .+.    .
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~  298 (384)
T 3zrp_A          221 LDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIV-ARRPESYS  298 (384)
T ss_dssp             TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-CSSGGGBC
T ss_pred             ccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEc-cCcccccC
Confidence               1111          111 25566666666666664333447888899999999999999988 77733 454    4


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++++++.++.      .+..++...|. ++||.+.+|..+.. +++|+++.  .+++++++++++|+++++++.
T Consensus       299 ~~~~~~~~~~------~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~  364 (384)
T 3zrp_A          299 NTVTGVILKV------ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG  364 (384)
T ss_dssp             SSEEEEECSS------SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             ccEEEEECCC------CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence            6777888864      25677877775 55999999874433 89999985  689999999999999998764

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=100.00  E-value=2.7e-33  Score=265.97  Aligned_cols=323  Identities=15%  Similarity=0.056  Sum_probs=241.0

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANV  134 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~v  134 (419)
                      .++++.+.+++.+.+.    ..|.+  .....++++.+++++      +.+.. +|++|+|+++++..+++++.++||+|
T Consensus        32 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~v  101 (393)
T 3kgw_A           32 SNLAPRVLAAGSLRMI----GHMQKEMLQIMEEIKQGIQYVF------QTRNPLTLVVSGSGHCAMETALFNLLEPGDSF  101 (393)
T ss_dssp             CCCCHHHHHHTTCCCC----CTTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhccccc----CcccHHHHHHHHHHHHHHHHHh------CCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence            3567888777755321    12222  123456677777776      33333 69999999999999999999999999


Q ss_pred             EeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          135 LLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       135 lv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      +++.++|++  +...+...|.+++.++++.  ++.+|++++++++++ ++++|++++|+||||.+++   +++|.++|++
T Consensus       102 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~  176 (393)
T 3kgw_A          102 LTGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHR  176 (393)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHH
Confidence            999988863  3567778899999998754  346899999999987 8999999999999999999   8899999999


Q ss_pred             CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc----
Q 014769          212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS----  287 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~----  287 (419)
                      +|+++|+|++|+...    ....+..   .+..+++.|+||+++ ++.++||+++++        ++++.+.....    
T Consensus       177 ~~~~li~De~~~~g~----~~~~~~~---~~~d~~~~s~sK~~~-~~~g~g~~~~~~--------~~~~~~~~~~~~~~~  240 (393)
T 3kgw_A          177 YQCLLLVDSVASLGG----VPIYMDQ---QGIDIMYSSSQKVLN-APPGISLISFND--------KAKYKVYSRKTKPVS  240 (393)
T ss_dssp             TTCEEEEECTTTTTT----SCCCTTT---TTCCEEEEESSSTTC-CCSSCEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred             cCCEEEEECCccccC----cccchhh---cCCCEEEecCccccc-CCCceeEEEECH--------HHHHHHhccCCCCCc
Confidence            999999999998421    1111222   223478889999753 233489999865        56776654211    


Q ss_pred             --------------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----
Q 014769          288 --------------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----  343 (419)
Q Consensus       288 --------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----  343 (419)
                                          ..++++...+.++..+++.....++++..++++++++.+.+.|+++ ++.++ .+.    
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~  318 (393)
T 3kgw_A          241 FYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFF-VKDPEIR  318 (393)
T ss_dssp             STTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGB
T ss_pred             eeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhc
Confidence                                1245567777777677765334457888999999999999999988 77633 332    


Q ss_pred             ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHHhcc
Q 014769          344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      .++++++.++..     .+..++...|++++||.+.+|..+..++++|+++ +  .+++++++++++|+++++++.+.
T Consensus       319 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~  391 (393)
T 3kgw_A          319 LPTITTVTVPAG-----YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPKN  391 (393)
T ss_dssp             CSSEEEEECCTT-----BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred             CCeEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence            256777777642     2567888888776699999998777789999998 6  38999999999999999987654

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=100.00  E-value=5.7e-33  Score=265.47  Aligned_cols=332  Identities=12%  Similarity=0.051  Sum_probs=246.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCc-EEEcccHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADD-VYVTLGCK  117 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~t~g~~  117 (419)
                      .+..+.|+-|-      .++++.+.+++.+.+    ...|.+  .....++++.+++++      +.+.++ +++++|++
T Consensus        11 ~~~~~~~~pgp------~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~sgt   74 (411)
T 3nnk_A           11 PPSRLLMGPGP------INADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVF------RTENRWTMLVDGTSR   74 (411)
T ss_dssp             CCCCEEESSSC------CCCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHH------TCCCSEEEEEESCHH
T ss_pred             CccceeecCCC------CCCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHh------CCCCCcEEEECCCcH
Confidence            44455666552      356788877775432    222322  122356666666666      344554 78899999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccc
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCG  194 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG  194 (419)
                      +++..++.++.++||+|+++.|+|++  +...++..|.+++.++++  .++.+|++++++++++ ++++|++++|+||||
T Consensus        75 ~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG  152 (411)
T 3nnk_A           75 AGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTT  152 (411)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcc
Confidence            99999999999999999999999987  788888999999999874  3457899999999986 899999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769          195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ  274 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  274 (419)
                      .+.+   +++|.++|+++|+++|+|++++...    ....+...   +..+++.|+||++ .++.++||+++++      
T Consensus       153 ~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~~~---~~d~~~~s~~K~l-~~~~g~g~~~~~~------  215 (411)
T 3nnk_A          153 MLQP---LAELGEICRRYDALFYTDATASLGG----NPLETDVW---GLDAVSAGMQKCL-GGPSGTSPITLSA------  215 (411)
T ss_dssp             EECC---CTTHHHHHHHHTCEEEEECTTTBTT----BCCCTTTT---TCSEEECCSTTTT-CCCSSEEEEEECH------
T ss_pred             eecc---HHHHHHHHHHcCCEEEEECCcccCC----cccchhcc---CCcEEEecCcccc-CCCCceEEEEECH------
Confidence            9999   8899999999999999999987522    11122222   2348899999973 2334589999865      


Q ss_pred             hhhHHHHHHhhh-------------------------------------ccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          275 KSGIIDSIKDCL-------------------------------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       275 ~~~~~~~l~~~~-------------------------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                        ++++.++...                                     ...++++...+.++..+++......+++..+
T Consensus       216 --~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~  293 (411)
T 3nnk_A          216 --RMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIA  293 (411)
T ss_dssp             --HHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             --HHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence              5666665432                                     1124556677777767776533333788889


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPEG---SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF  394 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~  394 (419)
                      +++++++.+.+.|+++ ++.++ .+.+   +.++++.++..     .+..++...|++++||.+.+|.....++++|+++
T Consensus       294 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~  366 (411)
T 3nnk_A          294 RHKLHGDALVKGIQAM-GLETF-GDLKHKMNNVLGVVIPQG-----INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGT  366 (411)
T ss_dssp             HHHHHHHHHHHHHHHT-TCCBC-SCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEEC
T ss_pred             HHHHHHHHHHHHHHHc-CCEeC-CCcccccccEEEEECCCC-----CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeC
Confidence            9999999999999987 77733 4433   67788888632     2567888888777799999986555578999998


Q ss_pred             -e--cCHHHHHHHHHHHHHHHHHHh
Q 014769          395 -C--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       395 -~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                       +  .+++++++++++|+++++++.
T Consensus       367 ~~~~~~~~~i~~~~~~l~~~l~~~~  391 (411)
T 3nnk_A          367 MGYNARKDCVMTTLSALEAVLNYLK  391 (411)
T ss_dssp             CGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCcCCHHHHHHHHHHHHHHHHHcC
Confidence             5  478999999999999998753

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=100.00  E-value=1e-33  Score=265.27  Aligned_cols=330  Identities=12%  Similarity=0.111  Sum_probs=231.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      .+.+|+|+.+.+     .++++.+++++.+.+.. ....|++.....++++.+++++    |   .+.+|++|+|+++++
T Consensus         6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~   72 (356)
T 1v72_A            6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN   72 (356)
T ss_dssp             CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred             CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence            567899998853     34678999999887632 1235554444455666666655    3   245699999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHH--Hhhc--CCEEEEEeccCCCCcccChHHHHH-hhcC-------CccEEEEeC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGI--AQRK--QVEVRHFDLLPERNWEVDLDAVEA-LADK-------NTAAMVIIN  188 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~~~~~l~~-~~~~-------~~~~v~i~~  188 (419)
                      ..++.++.++||.|+++.|+|......  +...  |.+++.++.+   ++.+|++++++ ++++       ++++|++++
T Consensus        73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~  149 (356)
T 1v72_A           73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ  149 (356)
T ss_dssp             HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred             HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence            999999999999999999998765544  5666  8888887753   36789999999 8875       578889999


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      |+| ||.++|.+++++|.++|+++|+++|+|++|..+..  .+.....+ .+..... +++.|+||. +. ...+||+++
T Consensus       150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~-~~G~g~~~~  224 (356)
T 1v72_A          150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GV-LAAEAIVLF  224 (356)
T ss_dssp             SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TC-SSCEEEEES
T ss_pred             CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CC-cCccEEEEE
Confidence            887 99999999999999999999999999999976421  12221111 1111122 345589998 44 223348777


Q ss_pred             eCCCCccchhhHHHHHHhhhcccc---CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769          267 NDPNGIFQKSGIIDSIKDCLSIYS---DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE  343 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  343 (419)
                      ++        ++++.++.......   ......+.++...++.   +.+.+..++++++++.+.+.|++++++.++ .|.
T Consensus       225 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~  292 (356)
T 1v72_A          225 NT--------SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGT  292 (356)
T ss_dssp             SG--------GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-SCC
T ss_pred             CH--------HHHhhHHHHhhccCchhhhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhCCCcEEc-cCC
Confidence            43        35555543322111   1122222223334432   344556777888899999999887788733 677


Q ss_pred             ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +++++|++++          .++..+| .++||.+.||. |+ .+++|+++.  .+++++++++++|++++++..
T Consensus       293 ~~~~~~~~~~----------~~~~~~l-~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~  354 (356)
T 1v72_A          293 EANILFCRLD----------SAMIDAL-LKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ  354 (356)
T ss_dssp             CSSEEEEEEC----------HHHHHHH-HHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred             CccEEEEEcC----------HHHHHHH-HhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence            8889998774          2566666 56799999987 55 789999984  589999999999999887654

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=100.00  E-value=1.2e-33  Score=264.38  Aligned_cols=318  Identities=15%  Similarity=0.062  Sum_probs=236.4

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEe
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLL  136 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv  136 (419)
                      .++++.+++++.+.+..   ..|+ ...+..++|+++++++    |...++++|++|+|+++++..++.++.+  |+|++
T Consensus         9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~   79 (353)
T 2yrr_A            9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLANLDR--GPVLV   79 (353)
T ss_dssp             CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred             CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence            46678888888766543   1232 2345678888888887    2223478899999999999999999876  89999


Q ss_pred             eCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769          137 PRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR  213 (419)
Q Consensus       137 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  213 (419)
                      ++|+|+++  ...++..|.+++.+++++  ++.+|++.+++.+++ +++++++++|+||||.+++   +++|.++|+++|
T Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~  154 (353)
T 2yrr_A           80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG  154 (353)
T ss_dssp             EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred             EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence            99999874  455677899999998754  456899999999887 7899999999999999999   889999999999


Q ss_pred             CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHh--------
Q 014769          214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKD--------  284 (419)
Q Consensus       214 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~--------  284 (419)
                      +++|+|++|+...    ...++..++   ..+++.|++|++ +.+|  +||+++++        ++++.++.        
T Consensus       155 ~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~  217 (353)
T 2yrr_A          155 ALFFLDAVTTLGM----LPFSMRAMG---VDYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDL  217 (353)
T ss_dssp             CEEEEECTTTTTT----SCCCHHHHT---CSEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCH
T ss_pred             CeEEEEcCccccc----ccccccccC---ceEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccccH
Confidence            9999999996422    112232232   237788999964 3355  79999875        45554430        


Q ss_pred             --------hhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCc
Q 014769          285 --------CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNP  354 (419)
Q Consensus       285 --------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~  354 (419)
                              .....++++...+.++..+++......+++.+++++++++.+.+.|+++ ++.++ .+.  ++++++++++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~  295 (353)
T 2yrr_A          218 ARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRPPE  295 (353)
T ss_dssp             HHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEECCT
T ss_pred             HHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEECCC
Confidence                    1122345677777777667665323347788899999999999999887 77733 343  56667788753


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHH-HHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALK-DGLGRMKAFCQR  414 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~-~~l~~l~~~~~~  414 (419)
                      .     .+..++...|. ++||.+.+|..|..++++|+++ . .++++++ +++++|+++++.
T Consensus       296 ~-----~~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~  352 (353)
T 2yrr_A          296 G-----VDADRLVRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL  352 (353)
T ss_dssp             T-----CCHHHHHHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred             C-----CCHHHHHHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence            1     24677777775 4699999998877788999999 3 5788888 999999988753

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=1.1e-33  Score=271.79  Aligned_cols=347  Identities=13%  Similarity=0.064  Sum_probs=238.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+..++||+.|.+.....+ .+|.+.+++.+++.....  ..|.+..+..+++++|++++.   + . .+++|++|+|++
T Consensus        39 ~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~  112 (426)
T 1sff_A           39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS  112 (426)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred             CCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence            4777899988864322222 578899999998865322  145556788999999999972   2 1 348999999999


Q ss_pred             HHHHHHHH---HhcCCCCeEEeeCCCCCCcHH-HHhhcCCE-------------EEEEeccC---CCCcccChHHHHHhh
Q 014769          118 QAVEVILS---VLARPGANVLLPRPGWPYYEG-IAQRKQVE-------------VRHFDLLP---ERNWEVDLDAVEALA  177 (419)
Q Consensus       118 ~al~~~~~---~l~~~gd~vlv~~p~~~~~~~-~~~~~g~~-------------~~~~~~~~---~~~~~~~~~~l~~~~  177 (419)
                      +++..+++   .+.++| .|++++|+|+++.. .+...|.+             +..++++.   ..++.+|++.|++++
T Consensus       113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l  191 (426)
T 1sff_A          113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF  191 (426)
T ss_dssp             HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence            99999988   677776 89999999987643 44444432             55666542   113457899999888


Q ss_pred             c-----CCccEEEEe-CCCCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769          178 D-----KNTAAMVII-NPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI  250 (419)
Q Consensus       178 ~-----~~~~~v~i~-~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  250 (419)
                      +     +++++|++. +++| || .+.|.+++++|.++|+++|+++|+||+|+++.+.+... .+...+..   +.+.||
T Consensus       192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~---~di~s~  266 (426)
T 1sff_A          192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVA---PDLTTF  266 (426)
T ss_dssp             HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSC---CSEEEE
T ss_pred             HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCCC---CCEEEE
Confidence            6     234444442 3467 99 78899999999999999999999999999876655321 22222221   223489


Q ss_pred             CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      ||.++. |+|+||+++++        ++++.+.... ..+++.+++.+.++.++|+....   .+..++++++++.+.+.
T Consensus       267 sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~  334 (426)
T 1sff_A          267 AKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDG  334 (426)
T ss_dssp             CGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred             cccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHH
Confidence            999876 99999999975        4666555322 23456788888888877764221   12344555666666666


Q ss_pred             hhc----CCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHH
Q 014769          330 VKE----IPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSA  400 (419)
Q Consensus       330 l~~----~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~  400 (419)
                      |++    ++.+. ...+. |+++|++++....   +...+..++...|+ ++||.+.||..+  .+++|++++  .++++
T Consensus       335 l~~~~~~~~~~~-~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~  409 (426)
T 1sff_A          335 LLAIAEKHPEIG-DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQ  409 (426)
T ss_dssp             HHHHHHTCTTEE-EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHH
T ss_pred             HHHHHHhCCCeE-EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHH
Confidence            554    33222 11344 7788998842100   00012456777765 579999998764  689999984  68999


Q ss_pred             HHHHHHHHHHHHHHH
Q 014769          401 LKDGLGRMKAFCQRH  415 (419)
Q Consensus       401 l~~~l~~l~~~~~~~  415 (419)
                      +++++++|+++++++
T Consensus       410 i~~~~~~l~~~l~~~  424 (426)
T 1sff_A          410 IRQGLEIISQCFDEA  424 (426)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999875

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=100.00  E-value=2.1e-32  Score=258.66  Aligned_cols=324  Identities=14%  Similarity=0.069  Sum_probs=232.6

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCC---------CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATN---------SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-  128 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-  128 (419)
                      ++++.+.+++.+.+....  .++..         ....++++.+++++      ++++++|++|+|+++++..+++++. 
T Consensus        11 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~~~~   82 (382)
T 4hvk_A           11 PVDERILEAMLPYMTESF--GNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAM   82 (382)
T ss_dssp             CCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhhc--CCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCchHHHHHHHHHhhh
Confidence            567899999999886521  11111         11236666666665      4567899999999999999999998 


Q ss_pred             ---CCCCeEEeeCCCCCCcHHHHhh---cCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769          129 ---RPGANVLLPRPGWPYYEGIAQR---KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL  202 (419)
Q Consensus       129 ---~~gd~vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  202 (419)
                         ++||+|+++.++|+++...+..   .|.+++.++++  .++.+|+++++++++++++++++++|+||||.+.+   +
T Consensus        83 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~  157 (382)
T 4hvk_A           83 RNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---V  157 (382)
T ss_dssp             HHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---H
T ss_pred             hhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---H
Confidence               8999999999999987665444   59999998875  34578999999999988999999999999999999   8


Q ss_pred             HHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769          203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI  282 (419)
Q Consensus       203 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l  282 (419)
                      ++|.++|+++|+ +|+|++|+...    ....+...+   ..+++.|+||.++.+|  +|+++++++..+.   ......
T Consensus       158 ~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~---~~~~~~  224 (382)
T 4hvk_A          158 EEISEVLAGKAA-LHIDATASVGQ----IEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGG  224 (382)
T ss_dssp             HHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHHT---CSEEEEESGGGTSCTT--CEEEEEETTCCCC---CSSCSS
T ss_pred             HHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhcC---CCEEEEeHHHhcCCCc--eEEEEEcCccCcC---cccccC
Confidence            899999999999 99999987522    111222222   3488999999876656  7888776532111   000000


Q ss_pred             -HhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEeecCccccc
Q 014769          283 -KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG---SMVTMVKLNPWLLE  358 (419)
Q Consensus       283 -~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~  358 (419)
                       .......++++...+.++..+++.. .+++++..++++++++.+.+.|+++|++.++ .+.+   +.++++.++.    
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~----  298 (382)
T 4hvk_A          225 GQENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFSY----  298 (382)
T ss_dssp             CTGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEETT----
T ss_pred             CCcCccccCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccCCCEEEEEECC----
Confidence             0001113455666777766666532 3577888999999999999999988887733 3332   2355565542    


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                        .+..++...| .++||.+.+|..|..                   ++++|++++  .++++++++++.|+++++++.+
T Consensus       299 --~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~  375 (382)
T 4hvk_A          299 --IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             --CCHHHHHHHH-HHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHHHH-HHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence              2466776666 667999999976653                   478999996  4789999999999999988754

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=3e-33  Score=264.15  Aligned_cols=323  Identities=14%  Similarity=0.128  Sum_probs=238.6

Q ss_pred             CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ++..++||+.|.|..  .++ +++.+.+++.+.+...  ....|+ ..+..++++++++++      ++ +++|++|+|+
T Consensus        26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~l~~~la~~~------g~-~~~v~~~~g~   95 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYE-NPWQEELAHKLVKHF------WT-EGKVFFANSG   95 (375)
T ss_dssp             TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBC-CHHHHHHHHHHHHTS------SS-CEEEEEESSH
T ss_pred             CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccC-CHHHHHHHHHHHhhc------CC-CCeEEEeCch
Confidence            477899999997632  244 6889999999887642  123574 356788999999886      34 4899999999


Q ss_pred             HHHHHHHHHH---hc---CCC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHHHh
Q 014769          117 KQAVEVILSV---LA---RPG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVEAL  176 (419)
Q Consensus       117 ~~al~~~~~~---l~---~~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~  176 (419)
                      ++++..++.+   +.   ++| |+|++++|+|+++...+...+..             +..++.       .|+++|+++
T Consensus        96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  168 (375)
T 2eh6_A           96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL  168 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence            9999999875   35   678 99999999999876655443322             222221       489999999


Q ss_pred             hcCCccEEEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769          177 ADKNTAAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL  255 (419)
Q Consensus       177 ~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  255 (419)
                      +++++++|++++|+||||.+ .+.+++++|.++|+++|+++|+||+|+++...+... .+..++...+++   ||||.++
T Consensus       169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~d~~---s~SK~~~  244 (375)
T 2eh6_A          169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFNLKPDVI---ALAKGLG  244 (375)
T ss_dssp             CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG
T ss_pred             hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcCCCCCEE---EEccccc
Confidence            98788899998999999998 568999999999999999999999999765443221 233333222333   7889987


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                       +|+|+||+++++        ++++.++.. ...+++.+++.+.++.++|+..     .+..++++++++.+.+.|++++
T Consensus       245 -~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~  310 (375)
T 2eh6_A          245 -GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELG  310 (375)
T ss_dssp             -TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHh
Confidence             699999999875        455555542 1224456778888777777642     1667788888999999998874


Q ss_pred             CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      . . . .+..|+++|++++.       +..++...|+ ++||.+.|+.    .+++|++++  .+++++++++++|++++
T Consensus       311 ~-~-~-~~~~g~~~~~~~~~-------~~~~~~~~l~-~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l  375 (375)
T 2eh6_A          311 K-G-K-VKGRGLMLGLELER-------ECKDYVLKAL-EKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREIL  375 (375)
T ss_dssp             S-S-E-EEEETTEEEEECSS-------CCHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred             c-C-C-ceEEEEEEEEEEcC-------cHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence            3 3 2 34567888988863       3466777775 5899999863    679999984  68999999999998753

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=100.00  E-value=2e-32  Score=262.06  Aligned_cols=331  Identities=13%  Similarity=0.081  Sum_probs=240.7

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEE-EcccHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVY-VTLGCKQ  118 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~-~t~g~~~  118 (419)
                      +..+.|+.|.      .++++.+.+++.+    .....|.+  .....++++.+++++      +.++++++ +++|+++
T Consensus        10 ~~~~~~~p~p------~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~~~~~~s~t~   73 (416)
T 3isl_A           10 PLRTIMTPGP------VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF------QTKNRWAYPIDGTSRA   73 (416)
T ss_dssp             CCCEECSSSS------CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT------TCCCSEEEEEESCHHH
T ss_pred             ccceeecCCC------cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh------CCCCCcEEEecCcHHH
Confidence            4445565542      2456666665543    22223332  123455666666665      34566665 8899999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCCCcccc
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGN  195 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~  195 (419)
                      ++..++.++.++||+|++++|+|++  +...++..|.+++.++++.  ++.+|+++++++++ +++++|++++|+||||.
T Consensus        74 al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~  151 (416)
T 3isl_A           74 GIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTGR  151 (416)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred             HHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCce
Confidence            9999999999999999999999987  6677888999999999764  34689999999997 58899999999999999


Q ss_pred             CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      +.+   +++|.++|+++|+++|+|++|+....    ...+..+   +..+++.|+||++ ..+.++|++++++       
T Consensus       152 ~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~l-~g~~g~g~~~~~~-------  213 (416)
T 3isl_A          152 IHP---LKAIGEACRTEDALFIVDAVATIGGC----EVKVDEW---KIDAAIGGTQKCL-SVPSGMAPITYNE-------  213 (416)
T ss_dssp             ECC---CHHHHHHHHHTTCEEEEECTTTTTTS----CCCTTTT---TCSEEECCSSSTT-CCCSSEEEEEECH-------
T ss_pred             ecC---HHHHHHHHHHcCCEEEEECCccccCC----Ccchhhc---CCCEEEecCcccc-CCCCCeEEEEECH-------
Confidence            999   88999999999999999999875321    1122222   2348899999973 2334589998865       


Q ss_pred             hhHHHHHHhh--------------------------------------hc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          276 SGIIDSIKDC--------------------------------------LS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       276 ~~~~~~l~~~--------------------------------------~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                       ++++.+...                                      .. ..++++...+.++..+++......+++..
T Consensus       214 -~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~  292 (416)
T 3isl_A          214 -RVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRF  292 (416)
T ss_dssp             -HHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             -HHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence             466555421                                      11 13455677777777777653223378889


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEE
Q 014769          317 DTLRESAEICYDGVKEIPCISCPNKPEG---SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA  393 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris  393 (419)
                      ++++++++.+.+.|+++ ++.++ .+.+   +.++++.++..     .+..++...|++++||.+.+|.....++++|++
T Consensus       293 ~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~  365 (416)
T 3isl_A          293 ERHRHHEAALAAGIKAM-GLRLF-GDDSCKMPVVTCVEIPGG-----IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIG  365 (416)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCCBC-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHc-CCEec-cCccccCCcEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEe
Confidence            99999999999999986 77733 4433   56777887632     257788888877679999998866567899999


Q ss_pred             e-e-cCH-HHHHHHHHHHHHHHHHHh
Q 014769          394 F-C-AEP-SALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       394 ~-~-~~~-~~l~~~l~~l~~~~~~~~  416 (419)
                      + . .++ +++++++++|+++++++.
T Consensus       366 ~~~~~~~~e~i~~~~~~l~~~~~~~~  391 (416)
T 3isl_A          366 TMGYSCRKENVLFVLAGLEAVLLRHN  391 (416)
T ss_dssp             CCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHHcC
Confidence            9 3 344 449999999999998763

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=100.00  E-value=7.3e-33  Score=259.76  Aligned_cols=332  Identities=13%  Similarity=0.066  Sum_probs=239.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      .+.+|+|+.+.+.     ++++.+.+++.+.+.     .|....|..++++.+++++.+.+|  .++++|++|+|+++++
T Consensus        12 ~p~~i~l~~~~~~-----~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~   79 (359)
T 1svv_A           12 KPKPYSFVNDYSV-----GMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN   79 (359)
T ss_dssp             ---CEECSCSCSS-----CCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred             CCeeEEecCCCcC-----CCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence            5568999986532     567899999998874     366666778899999998888766  5678999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHH--HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-------ccEEEEeCCCC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEG--IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-------TAAMVIINPGN  191 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~v~i~~p~n  191 (419)
                      ..++.+++++||+|++++|+|+++..  .+...|.+++.++.+   ++.+|++.|++.++++       +++|++++| |
T Consensus        80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~  155 (359)
T 1svv_A           80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T  155 (359)
T ss_dssp             HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred             HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence            99999999999999999999998776  477889999988863   5789999999988765       788899998 7


Q ss_pred             ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769          192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPN  270 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  270 (419)
                      |||.++|.+++++|.++|+++|+++|+||+|..+.++..+. ....+. .....+++.|.+|. +.+ ..+|++++++  
T Consensus       156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~--  230 (359)
T 1svv_A          156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND--  230 (359)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--
T ss_pred             CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--
Confidence            99999999999999999999999999999995543322111 111100 00122667789997 443 5589998854  


Q ss_pred             CccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 014769          271 GIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV  347 (419)
Q Consensus       271 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~  347 (419)
                            ++++.++..   .......+.....++..+++.   ..+++..++++++++.+.+.| +.+++. +..|.++++
T Consensus       231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~~~~~~~  299 (359)
T 1svv_A          231 ------ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIR-LAWPSASNQ  299 (359)
T ss_dssp             ------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCC-BSSCCSSSE
T ss_pred             ------cHHHHHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeE-EccCCccce
Confidence                  233333322   111111122222333445543   456778888999999999999 556887 446788889


Q ss_pred             EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +|++++          .++..+|++++||.+.+.. ....+++|++++  .+++++++++++|++++++.
T Consensus       300 ~~~~~~----------~~~~~~l~~~~gi~v~~~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  358 (359)
T 1svv_A          300 LFPILE----------NTMIAELNNDFDMYTVEPL-KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST  358 (359)
T ss_dssp             ECBEEE----------HHHHHHHTTTEECEEEEEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred             EEEEcC----------HHHHHHHHHhcCEEEEecc-cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence            888663          3677777665599983311 123578999984  68999999999999988654

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=9.6e-33  Score=263.50  Aligned_cols=326  Identities=11%  Similarity=0.078  Sum_probs=241.2

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCC----CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYA----TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~----~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +++.|+.+.+.     ++++.+.+++.+.+.....   ..|.    ...+..++|+++++++      +.++++|++|+|
T Consensus        26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g   94 (406)
T 3cai_A           26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD   94 (406)
T ss_dssp             SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred             CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence            47888877643     5678899999988764211   1232    2345688999999998      567789999999


Q ss_pred             HHHHHHHHHHHh---cCCCCeEEeeCCCCCCcHHHHhh----cCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC
Q 014769          116 CKQAVEVILSVL---ARPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN  188 (419)
Q Consensus       116 ~~~al~~~~~~l---~~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~  188 (419)
                      +++++..++.++   .++||+|+++.|+|+++...+..    .|.+++.++++++ ++.+|++.|++++++++++|++++
T Consensus        95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~  173 (406)
T 3cai_A           95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNS  173 (406)
T ss_dssp             HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEES
T ss_pred             hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeC
Confidence            999999999987   78999999999999976554433    6999999987633 457899999999988889999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE-EEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG-WLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~  267 (419)
                      |+||||.+++   +++|.++|+++|+++|+|++|+...    ....+..++   ..+++.|+||.++ ++  +| |++++
T Consensus       174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~  240 (406)
T 3cai_A          174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY----RLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRD  240 (406)
T ss_dssp             BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT----CCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred             CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEe
Confidence            9999999999   8899999999999999999998521    112222222   3488899999854 44  89 99886


Q ss_pred             CCCCccchhhHHHHHHhhhc---------c-ccCCchHHHHHHHHHHcccch--------------HHHHHHHHHHHHHH
Q 014769          268 DPNGIFQKSGIIDSIKDCLS---------I-YSDIPTFIQGAIPQILEKTKE--------------DFFCKLIDTLRESA  323 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~~---------~-~~~~~~~~~~a~~~~l~~~~~--------------~~~~~~~~~~~~~~  323 (419)
                      +        ++++.++....         + .++++...+.++..+++....              .++++..+++++++
T Consensus       241 ~--------~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (406)
T 3cai_A          241 P--------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVF  312 (406)
T ss_dssp             H--------HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             h--------HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHH
Confidence            4        45555543321         1 244566665555555543211              15778888999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCC---ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC------CCCC---CCeEE
Q 014769          324 EICYDGVKEIPCISCPNKPE---GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI------YVGL---KNWLR  391 (419)
Q Consensus       324 ~~l~~~l~~~~~~~~~~~p~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------~~~~---~~~~R  391 (419)
                      +.+.+.|++++++.++ .|.   ++ ++++.++.      .+..++...| .++||.+.+|.      .|+.   .+++|
T Consensus       313 ~~l~~~L~~~~~~~~~-~~~~~~~~-~~~~~~~~------~~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~~~~iR  383 (406)
T 3cai_A          313 DYLMVSLRSLPLVMLI-GRPEAQIP-VVSFAVHK------VPADRVVQRL-ADNGILAIANTGSRVLDVLGVNDVGGAVT  383 (406)
T ss_dssp             HHHHHHHHTCTTEEEC-CCCSSBCS-EEEEEETT------BCHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTTTCCEE
T ss_pred             HHHHHHHhcCCCeEEc-CCccccCC-EEEEEECC------cCHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCCCCeEE
Confidence            9999999988777633 443   44 67777753      1466777766 56899999987      3333   47899


Q ss_pred             EEeec--CHHHHHHHHHHHHH
Q 014769          392 IAFCA--EPSALKDGLGRMKA  410 (419)
Q Consensus       392 is~~~--~~~~l~~~l~~l~~  410 (419)
                      ++++.  ++++++++++.|++
T Consensus       384 is~~~~~t~e~i~~~~~~l~~  404 (406)
T 3cai_A          384 VGLAHYSTMAEVDQLVRALAS  404 (406)
T ss_dssp             EECCTTCCHHHHHHHHHHHHT
T ss_pred             EEeecCCCHHHHHHHHHHHHH
Confidence            99964  78999999999875

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=100.00  E-value=9e-33  Score=259.79  Aligned_cols=330  Identities=13%  Similarity=0.115  Sum_probs=241.4

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ++++|+.| |.     +.++.+.+++.+.+.    +.|+.  ..+..++|+++++++.    ...+++++++|+|+++++
T Consensus         4 ~~~~~~~g-p~-----~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~   69 (366)
T 1m32_A            4 NYLLLTPG-PL-----TTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAV   69 (366)
T ss_dssp             -CEECSSS-SC-----CCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHH
T ss_pred             ccccccCC-Cc-----CCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHH
Confidence            36899999 42     367888888765421    12321  1678999999999983    122335899999999999


Q ss_pred             HHHHHHhcCCCCeEEeeC-CCCCC-cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccC
Q 014769          121 EVILSVLARPGANVLLPR-PGWPY-YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNV  196 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~  196 (419)
                      ..++.+++++||+|++++ ++|.. +...+...|.+++.++++.  ++.+|++.+++++++  +++++++++|+||||.+
T Consensus        70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~  147 (366)
T 1m32_A           70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML  147 (366)
T ss_dssp             HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred             HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence            999999999999988876 55543 5566778899999988753  456899999998875  47888999999999999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      +|   +++|.++|+++|+++|+|++|+.+..    ...+..+   +..+++.|+||+++. +.++||+++++        
T Consensus       148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~~K~~~~-~~g~G~~~~~~--------  208 (366)
T 1m32_A          148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAAL---HIDYLISSANKCIQG-VPGFAFVIARE--------  208 (366)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTT---TCSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred             cC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccccc---CccEEEecCcccccC-CCceEEEEECH--------
Confidence            99   88999999999999999999985332    1122222   345889999997532 34579999975        


Q ss_pred             hHHHHHHhhh------------------c-cccCCchHHHHHHHHHHcccchHH-HHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769          277 GIIDSIKDCL------------------S-IYSDIPTFIQGAIPQILEKTKEDF-FCKLIDTLRESAEICYDGVKEIPCI  336 (419)
Q Consensus       277 ~~~~~l~~~~------------------~-~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~  336 (419)
                      ++++.++...                  . ..++++...+.++..+++...... +++.+++++++++.+.+.|+++ ++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~  287 (366)
T 1m32_A          209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GF  287 (366)
T ss_dssp             HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CC
Confidence            3444332210                  0 024567777777777776532222 6778889999999999999987 77


Q ss_pred             CCCCCC---CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769          337 SCPNKP---EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       337 ~~~~~p---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~  411 (419)
                      .++ .|   .+++++|+.++...   ..+..++...|. ++||.+.+|..| ..+++|++++  .+++++++++++|+++
T Consensus       288 ~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~-~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~  361 (366)
T 1m32_A          288 NTL-LDDELHSPIITAFYSPEDP---QYRFSEFYRRLK-EQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTA  361 (366)
T ss_dssp             CBS-SCGGGBCSSEEEEECCCCT---TCCHHHHHHHHH-HTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             eec-cCchhcCceEEEEEcCccC---CCCHHHHHHHHH-HCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            633 33   35778898886310   124677777775 569999999876 4689999996  4789999999999988


Q ss_pred             HHH
Q 014769          412 CQR  414 (419)
Q Consensus       412 ~~~  414 (419)
                      +++
T Consensus       362 ~~~  364 (366)
T 1m32_A          362 MYW  364 (366)
T ss_dssp             CTT
T ss_pred             HHh
Confidence            754

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=100.00  E-value=5.6e-32  Score=254.81  Aligned_cols=331  Identities=14%  Similarity=0.075  Sum_probs=228.6

Q ss_pred             CC-CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           41 PR-PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        41 ~~-~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      |. ++||++.|.+    ..++++.+++++.         .|..+   ..+++.+++++.+.+|.. +++++++++|++++
T Consensus        26 g~~~v~~~~~~~~----~~~~~~~v~~a~~---------~~~~~---~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a   88 (374)
T 2aeu_A           26 GRDALYDLSGLSG----GFLIDEKDKALLN---------TYIGS---SYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA   88 (374)
T ss_dssp             CGGGCEECSSCCC----CCCCCHHHHHHHT---------STTHH---HHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred             CccceeeecccCC----CCCCCHHHHHHHH---------HhcCc---hHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence            66 7999999874    3567888888874         12211   355566666665555533 35789999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE-EEEeCCCCcccc
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA-MVIINPGNPCGN  195 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-v~i~~p~nptG~  195 (419)
                      +..++.++  +||+|+++.|+|+++..   .+...|.+++.+         .|++.++++ ++++++ |++++|+||||.
T Consensus        89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~  156 (374)
T 2aeu_A           89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI  156 (374)
T ss_dssp             HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred             HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence            99999988  99999999999887544   567789888776         278888888 777889 889999999997


Q ss_pred             CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                        +..++++|.++|+++|+++|+|++|+.+..+.....+...++   ..++++|+||.  ++|+|+||+++++       
T Consensus       157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~---~di~~~S~sK~--l~g~~~G~~~~~~-------  222 (374)
T 2aeu_A          157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKL--MEGPRGGLLAGKK-------  222 (374)
T ss_dssp             --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSS--SSSCSCEEEEEEH-------
T ss_pred             --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccC---CcEEEecCccc--ccCcceEEEEECH-------
Confidence              677899999999999999999999987641000000011222   34888999998  4578999999875       


Q ss_pred             hhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH----HHHHHHHhhcC---CCCCCCCCCCceEE
Q 014769          276 SGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES----AEICYDGVKEI---PCISCPNKPEGSMV  347 (419)
Q Consensus       276 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~---~~~~~~~~p~~g~~  347 (419)
                       ++++.++.... ...+++++.+.++..+++....+.+++..+..+..    ++.+.+.|..+   +++.+...|.+.++
T Consensus       223 -~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~  301 (374)
T 2aeu_A          223 -ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVI  301 (374)
T ss_dssp             -HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEE
T ss_pred             -HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEE
Confidence             57777776543 23456788888888888764322233333222222    45556655553   24442235666666


Q ss_pred             EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEEeec-C--HHHHHHHHHHHHHHHHHHhc
Q 014769          348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIAFCA-E--PSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~~-~--~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .|..++...  ...++.+++.++++++||.+.||..|. ..+++||+++. +  +.+++++++.|++++++..+
T Consensus       302 ~~~~~~~~~--~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~  373 (374)
T 2aeu_A          302 KRVYKDDTI--NIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK  373 (374)
T ss_dssp             EEEESSHHH--HHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred             Eeecccccc--cccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence            665443210  000123366778888999999998763 35799999953 2  23488888888888887654

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=1.2e-32  Score=262.77  Aligned_cols=336  Identities=15%  Similarity=0.168  Sum_probs=238.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      +|+.++||+.|.+...... .+|.+.+++.+++.....  ..|+. ....++++.+++++    +    .++|++|+|++
T Consensus        37 ~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~----~~~v~~~~gg~  106 (406)
T 4adb_A           37 QGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT----F----ADRVFFCNSGA  106 (406)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSCC-HHHHHHHHHHHHHS----S----CSEEEEESSHH
T ss_pred             CCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCcCC-HHHHHHHHHHHhhC----C----CCeEEEeCcHH
Confidence            4778999999843322222 578999999998875321  22322 22345555555554    2    45999999999


Q ss_pred             HHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCcccChHHHHHh
Q 014769          118 QAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEVDLDAVEAL  176 (419)
Q Consensus       118 ~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~  176 (419)
                      +++..+++++..       +| |.|++++|+|+++...+...+.             ++..++.       .|+++|+++
T Consensus       107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  179 (406)
T 4adb_A          107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASAL  179 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHH
Confidence            999999998865       66 9999999999988555444443             2222221       378999999


Q ss_pred             hcCCccEEEEeCCCCccccCC--CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC
Q 014769          177 ADKNTAAMVIINPGNPCGNVF--TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW  254 (419)
Q Consensus       177 ~~~~~~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  254 (419)
                      +++++++|+++ |+||||.++  +.+++++|.++|+++|+++|+||+|+++.+.+... .+..++...+++   ||||.+
T Consensus       180 l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~  254 (406)
T 4adb_A          180 IDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKAL  254 (406)
T ss_dssp             CSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGG
T ss_pred             hcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhh
Confidence            98777777777 999999988  99999999999999999999999999876665432 222233333344   679998


Q ss_pred             CCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      + +|+|+||+++++        ++++.+.... ..+++.+++.+.++.++++....   ++..++++++++.+.+.|+++
T Consensus       255 ~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~  322 (406)
T 4adb_A          255 G-GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTI  322 (406)
T ss_dssp             G-TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence            7 899999999865        5666666543 33567788888888888875322   456667777777777777653


Q ss_pred             C-CCCCC-CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769          334 P-CISCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK  409 (419)
Q Consensus       334 ~-~~~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~  409 (419)
                      . .+..+ ..+..|.++++.++...   ..+..++...++ ++||.+.|+.    .+++|+++  ..+++++++++++|+
T Consensus       323 ~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~  394 (406)
T 4adb_A          323 NHRYGLFSEVRGLGLLIGCVLNADY---AGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA  394 (406)
T ss_dssp             HHHHCCEEEEEEETTEEEEEECTTT---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             HHhCCCceEEEEEEEEEEEEEeCCc---HHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence            1 11101 12334678888886421   014667777775 4699999864    68999975  568999999999999


Q ss_pred             HHHHHHhc
Q 014769          410 AFCQRHTK  417 (419)
Q Consensus       410 ~~~~~~~~  417 (419)
                      ++++++.+
T Consensus       395 ~~l~~~~~  402 (406)
T 4adb_A          395 AACEHFVS  402 (406)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            99988764

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=100.00  E-value=8.1e-32  Score=254.41  Aligned_cols=330  Identities=12%  Similarity=0.092  Sum_probs=232.2

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      ....+|+.|.      .++++.+.+++.+.+..    .|.+  +..++.+.+.+++.+.+|.+.+.+.+++|+|++++++
T Consensus        18 ~~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~   85 (376)
T 3f0h_A           18 QGMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSME   85 (376)
T ss_dssp             SSCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHH
T ss_pred             cCceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHH
Confidence            3456666662      35678888887654421    2222  2335555555555555554433345666999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          122 VILSVLARPGANVLLPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      .++++++++||+|+++.|+|++..  ..+...|.++..++.+  .++.+|++.++++++++++++++++|+||||.++| 
T Consensus        86 ~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~-  162 (376)
T 3f0h_A           86 AVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD-  162 (376)
T ss_dssp             HHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC-
T ss_pred             HHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC-
Confidence            999999999999999999887643  3466778898888875  34679999999988888999999999999999999 


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                        +++|.++|+++|+++|+|++|+.+...    ..+..++   ..+++.|+||.++ .+|  +|++++++        ++
T Consensus       163 --l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~---~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~  223 (376)
T 3f0h_A          163 --TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNECG---ADVMITGSQKVLACPPG--ISVIVLAP--------RG  223 (376)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHT---CSEEEEETTTTTCCCSS--CEEEEECH--------HH
T ss_pred             --HHHHHHHHHHcCCEEEEEcCccccCcc----ccccccC---ccEEEecCcccccCCCc--eEEEEECH--------HH
Confidence              999999999999999999999864321    1222222   2388889999986 455  67777764        56


Q ss_pred             HHHHHhhh------------------ccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769          279 IDSIKDCL------------------SIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCP  339 (419)
Q Consensus       279 ~~~l~~~~------------------~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  339 (419)
                      ++.+....                  ...++++...+.++..+++..... .+++..++++++++.+.+.|+++ ++...
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~  302 (376)
T 3f0h_A          224 VERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELV  302 (376)
T ss_dssp             HHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEEC
T ss_pred             HHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccC
Confidence            66665321                  112344444445555555432223 57888889999999999999887 55422


Q ss_pred             CCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769          340 NKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       340 ~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                       .+.  .+++.+ ..+.      .+..++...|.+++||.+.+|......+++|+++.  .+++++++++++|++++++
T Consensus       303 -~~~~~~~~~~~-~~~~------~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~  373 (376)
T 3f0h_A          303 -SESPANGVTSV-HPTT------ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR  373 (376)
T ss_dssp             -CSSBBTTEEEE-EESS------SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             -ccccCceEEEE-eCCC------CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence             332  233332 2221      25678888886666999999865445789999994  5899999999999998864

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=100.00  E-value=4.9e-32  Score=258.69  Aligned_cols=348  Identities=14%  Similarity=0.089  Sum_probs=245.2

Q ss_pred             hhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCC---CCHH--HHH-----H
Q 014769           23 VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNS---GIPP--ARR-----A   92 (419)
Q Consensus        23 ~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---g~~~--lr~-----~   92 (419)
                      ..+...+.+..+.     ..++|+|..|.+.      .++.+.+++.+.+.......|+.+.   |.+.  +++     .
T Consensus         9 ~~i~~~~~~~~~~-----~~~~i~~~~~~~~------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~   77 (407)
T 2dkj_A            9 EALFELIALEEKR-----QREGLELIASENF------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIER   77 (407)
T ss_dssp             HHHHHHHHHHHHH-----HHTSEECCTTCCC------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----hhcceeeccCCCC------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHH
Confidence            3455555544332     3578999999732      2789999998887643234565432   5543  333     4


Q ss_pred             HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc---HHHHhhcCC--EEEEEeccCCCCcc
Q 014769           93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY---EGIAQRKQV--EVRHFDLLPERNWE  167 (419)
Q Consensus        93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~---~~~~~~~g~--~~~~~~~~~~~~~~  167 (419)
                      +++++      +.++++|++++|+ +++..++.++.++||+|++++|+|+.+   ...+...|.  ..+.+++++ .++.
T Consensus        78 la~~~------g~~~~~i~~~sGt-~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~  149 (407)
T 2dkj_A           78 AKALF------GAAWANVQPHSGS-QANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP-DTEL  149 (407)
T ss_dssp             HHHHH------TCSEEECCCSSHH-HHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT-TTSS
T ss_pred             HHHHh------CCCcceEEecchH-HHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCc-ccCc
Confidence            55554      3445556667665 599999999999999999999999887   344455555  333443332 3567


Q ss_pred             cChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCCcEE
Q 014769          168 VDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVI  245 (419)
Q Consensus       168 ~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i  245 (419)
                      +|++.+++++++ +++++++++|+||  ...+   +++|.++|+++|+++|+||+|+. +.+.+.....+   .  ...+
T Consensus       150 ~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di  219 (407)
T 2dkj_A          150 IDLEEVRRLALEHRPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHV  219 (407)
T ss_dssp             CCHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSE
T ss_pred             cCHHHHHHHHhhcCCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccE
Confidence            999999999874 7889988899998  5666   89999999999999999999997 54444322111   1  1358


Q ss_pred             EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769          246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA  323 (419)
Q Consensus       246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  323 (419)
                      ++.|+||.  ++|.|+||++++++       ++++.++.... . .++++.....++..+++.....++++..+++++++
T Consensus       220 ~~~s~sK~--l~g~~~G~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~  290 (407)
T 2dkj_A          220 VTSTTHKT--LRGPRGGLILSNDP-------ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENA  290 (407)
T ss_dssp             EEEESSGG--GCCCSCEEEEESCH-------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             EEEecccc--CCCCCceEEEECCH-------HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            89999996  45888999998731       57777765532 1 23444444445556665432367788899999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC------CCCCeEEEEee--
Q 014769          324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV------GLKNWLRIAFC--  395 (419)
Q Consensus       324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~------~~~~~~Ris~~--  395 (419)
                      +.+.+.|+++ ++.++..+..++++|+.++...    .+..++...| .++||.+.+|..|      +.++++|++++  
T Consensus       291 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~  364 (407)
T 2dkj_A          291 KRLAEELARR-GYRIVTGGTDNHLFLVDLRPKG----LTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAI  364 (407)
T ss_dssp             HHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHH
T ss_pred             HHHHHHHHhC-CceeecCCCCceEEEEECcccC----CCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccc
Confidence            9999999988 7764422567888999886421    1456666665 7789999998754      23678999994  


Q ss_pred             ----cCHHHHHHHHHHHHHHHHH
Q 014769          396 ----AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       396 ----~~~~~l~~~l~~l~~~~~~  414 (419)
                          .+++++++++++|++++++
T Consensus       365 ~~~~~~~~~i~~~~~~l~~~~~~  387 (407)
T 2dkj_A          365 TTRGFTPEEMPLVAELIDRALLE  387 (407)
T ss_dssp             HHTTCCGGGHHHHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHHHHHHHHhc
Confidence                6899999999999999877

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=4.8e-32  Score=260.59  Aligned_cols=356  Identities=12%  Similarity=0.043  Sum_probs=225.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|+.++||+.|.+..... ..+|.+.+++.+++....  .|....+..+.++++++++.+..+  .+.++|++|+|++++
T Consensus        27 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea  101 (430)
T 3i4j_A           27 AGRRYLDGSSGALVANIG-HGRAEVGERMAAQAARLP--FVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA  101 (430)
T ss_dssp             TSCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCC--CCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred             CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhcc--cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence            478899999884432211 238899999999886532  344334556677777777776655  456799999999999


Q ss_pred             HHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCCE---------------EEEEeccCC-CCcccChHHHHH
Q 014769          120 VEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVE---------------VRHFDLLPE-RNWEVDLDAVEA  175 (419)
Q Consensus       120 l~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~-~~~~~~~~~l~~  175 (419)
                      +..++++++.        +++.|++.+|+|+++...+...+..               +..++.+.. .....|++.|++
T Consensus       102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~  181 (430)
T 3i4j_A          102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA  181 (430)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence            9999998863        4689999999999876554444332               111221100 001235578888


Q ss_pred             hhcC---CccEEEEeCC-CC-cccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEe
Q 014769          176 LADK---NTAAMVIINP-GN-PCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLG  248 (419)
Q Consensus       176 ~~~~---~~~~v~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~  248 (419)
                      +++.   +...+++++| +| ++|. +.+.+++++|.++|+++|+++|+||+|.++.+.+.. ..+..+ +...+++   
T Consensus       182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~di~---  257 (430)
T 3i4j_A          182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPDIA---  257 (430)
T ss_dssp             HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCSEE---
T ss_pred             HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCcEE---
Confidence            7763   4456666666 56 7886 678899999999999999999999999988666542 222333 3222333   


Q ss_pred             cCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHH
Q 014769          249 SISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRE  321 (419)
Q Consensus       249 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~  321 (419)
                      +|||.++ +| +|+||+++++        ++++.+...     ...+++.+++++.++.++|+... .+..++.++..+.
T Consensus       258 t~sK~l~-~G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~  328 (430)
T 3i4j_A          258 VLGKGLA-AGYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQ  328 (430)
T ss_dssp             EECGGGT-TTSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred             EEccccc-CCccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence            6899986 49 9999999865        688888763     23456788999998888887532 2334444444444


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC----CCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEe
Q 014769          322 SAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED----INDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAF  394 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~  394 (419)
                      .++.+.+.+..+|++. . .+..|.|+++.+.......    .....++...++ ++||.+.|+..+.   ..+++||++
T Consensus       329 ~~~~l~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~iRi~~  405 (430)
T 3i4j_A          329 LLAGLQALQARFPQMM-Q-VRGTGLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHLLLGP  405 (430)
T ss_dssp             HHHHHHHHHHHCTTEE-E-EEEETTEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEEEECC
T ss_pred             HHHHHHHHHHhCCCeE-E-EEEEEEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEEEEEC
Confidence            5555555554555554 2 2333557777765211000    011256666664 6799999984322   257899998


Q ss_pred             e--cCHHHHHHHHHHHHHHHHHHh
Q 014769          395 C--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       395 ~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +  .+++++++++++|+++++++.
T Consensus       406 ~~~~t~e~i~~~l~~l~~~l~~~~  429 (430)
T 3i4j_A          406 PLSITAAEVDGLLALLAGALEDVL  429 (430)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHhh
Confidence            5  689999999999999998764

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=1.4e-32  Score=261.63  Aligned_cols=333  Identities=12%  Similarity=0.109  Sum_probs=233.5

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      ++..++||+.|....... +.+|.+.+++.+++.....  +.. ....++++.+++.+.+..|    +++|++|+|++++
T Consensus        38 ~g~~~ld~~~~~~~~~lg-~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a  109 (397)
T 2ord_A           38 KGNAYLDFTSGIAVNVLG-HSHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEA  109 (397)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHH
T ss_pred             CCCEEEECCccccccccC-CCCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            477889998883211112 2578899999998865321  111 0112444455555544333    5799999999999


Q ss_pred             HHHHHHHhcC------C-CCeEEeeCCCCCCcH-HHHhhcCCE------------EEEEeccCCCCcccChHHHHHhhcC
Q 014769          120 VEVILSVLAR------P-GANVLLPRPGWPYYE-GIAQRKQVE------------VRHFDLLPERNWEVDLDAVEALADK  179 (419)
Q Consensus       120 l~~~~~~l~~------~-gd~vlv~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~~  179 (419)
                      +..+++++..      + ++.|++++|+|++.. ..+...|.+            +..++.       .|++.|++++++
T Consensus       110 ~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~  182 (397)
T 2ord_A          110 NEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE  182 (397)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT
T ss_pred             HHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc
Confidence            9999998864      5 478999999997644 356666654            555543       278999999988


Q ss_pred             CccEEEEeCCCCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          180 NTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       180 ~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ++++|++++|+||||. +++.+++++|.++|+++|+++|+||+|+++.+.+.. .++..++...+++   ||||.++ +|
T Consensus       183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G  257 (397)
T 2ord_A          183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GG  257 (397)
T ss_dssp             TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TT
T ss_pred             CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CC
Confidence            8899999999999999 999999999999999999999999999977665532 2222233222333   7899987 89


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-CC
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP-CI  336 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~  336 (419)
                      +|+||++++++        ++ .++.. ...+++.+++.+.++.++|+....   ++..++++++++.+.+.|++++ ++
T Consensus       258 ~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~  325 (397)
T 2ord_A          258 VPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEY  325 (397)
T ss_dssp             SCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998762        33 33321 223456788888888888865322   3566777788888888776641 22


Q ss_pred             CCC-CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769          337 SCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       337 ~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~  413 (419)
                      ..+ ..+..|.++++.++..     .+..++...|++ +||.+.|+.    ++++|+++  ..+++++++++++|+++++
T Consensus       326 ~~~~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~-~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~  395 (397)
T 2ord_A          326 DVVADVRGMGLMIGIQFREE-----VSNREVATKCFE-NKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQ  395 (397)
T ss_dssp             TTEEEEEEETTEEEEEECTT-----SCHHHHHHHHHH-TTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEEeEEEEEEECCh-----HHHHHHHHHHHH-CCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence            211 1233466778888641     146777777754 799999973    67999996  4689999999999999876


Q ss_pred             H
Q 014769          414 R  414 (419)
Q Consensus       414 ~  414 (419)
                      +
T Consensus       396 ~  396 (397)
T 2ord_A          396 G  396 (397)
T ss_dssp             T
T ss_pred             h
Confidence            4

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=1e-31  Score=257.26  Aligned_cols=340  Identities=14%  Similarity=0.100  Sum_probs=230.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .+..++||+.|.+......+.+|.+++++.+++....  .|++..+..+++..+++.+.+..|... +++|++|+|++++
T Consensus        40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea  116 (419)
T 2eo5_A           40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEA  116 (419)
T ss_dssp             TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHH
T ss_pred             CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHH
Confidence            4677899998875422112227999999999986542  233222333445555555555555332 7899999999999


Q ss_pred             HHHHHHHhcC-CCCeEEeeCCCCCCcHHHHh-hc-------------CCEEEEEeccCCC--Ccc------------cCh
Q 014769          120 VEVILSVLAR-PGANVLLPRPGWPYYEGIAQ-RK-------------QVEVRHFDLLPER--NWE------------VDL  170 (419)
Q Consensus       120 l~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~-~~-------------g~~~~~~~~~~~~--~~~------------~~~  170 (419)
                      ++.+++++.. +||+|++++|+|+++..... ..             ..++..++.+...  .++            +|+
T Consensus       117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~  196 (419)
T 2eo5_A          117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVI  196 (419)
T ss_dssp             HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHH
Confidence            9999987654 48999999999986544322 11             1245566653211  011            367


Q ss_pred             HHHH-HhhcC----CccEEEEeCCC-Ccccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769          171 DAVE-ALADK----NTAAMVIINPG-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP  243 (419)
Q Consensus       171 ~~l~-~~~~~----~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  243 (419)
                      +.|+ +++++    ....+++++|+ ||||. +.+.+++++|.++|+++|+++|+||+|.++.+.+... .+..++...+
T Consensus       197 ~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~-~~~~~~~~~d  275 (419)
T 2eo5_A          197 EFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLF-AIENFNTVPD  275 (419)
T ss_dssp             HHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS
T ss_pred             HHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchh-hHHhcCCCCC
Confidence            8888 87763    23456777885 57896 6789999999999999999999999999876655321 2222222223


Q ss_pred             EEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769          244 VITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES  322 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  322 (419)
                      ++   ||||.++ +| +|+||+++++        +++ .+......+++.+++++.++.++++..     ++..++++++
T Consensus       276 ~~---t~sK~~~-~G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~-----~~~~~~~~~~  337 (419)
T 2eo5_A          276 VI---TLAKALG-GGIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDIV-----KDLLPHVNEI  337 (419)
T ss_dssp             EE---EECGGGG-TTTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred             EE---Eeccccc-CCccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence            33   7999987 49 9999999976        233 331122335677899999988888752     2267888899


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHH
Q 014769          323 AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSA  400 (419)
Q Consensus       323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~  400 (419)
                      ++.+.+.|+++  +. . .+..|.|+++++....    .... +...|+ ++||.+.|+.    .+++||++  ..++++
T Consensus       338 ~~~l~~~L~~~--~~-~-~~~~g~~~~i~~~~~~----~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~  403 (419)
T 2eo5_A          338 GKIFAEELQGL--AD-D-VRGIGLAWGLEYNEKK----VRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEE  403 (419)
T ss_dssp             HHHHHHHHTTS--SS-E-EEEETTEEEEECSCHH----HHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHH
T ss_pred             HHHHHHHHHHh--hh-h-eEeeeEEEEEEEecCc----cHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHH
Confidence            99999999876  33 2 2344667788883110    0234 666665 7899999974    57999987  468999


Q ss_pred             HHHHHHHHHHHHHHH
Q 014769          401 LKDGLGRMKAFCQRH  415 (419)
Q Consensus       401 l~~~l~~l~~~~~~~  415 (419)
                      +++++++|+++++++
T Consensus       404 i~~~l~~l~~~l~~~  418 (419)
T 2eo5_A          404 AKQGLDILKKVIKVV  418 (419)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999998763

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=100.00  E-value=6.7e-31  Score=249.22  Aligned_cols=315  Identities=15%  Similarity=0.138  Sum_probs=230.5

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP  139 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p  139 (419)
                      .+.+++++.+.+..+.+ .|.+..+..++|+++++++.      .+ +.|++++| +++++.++.++ .++||+|+++.|
T Consensus        16 ~~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~------~~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~   86 (388)
T 1b9h_A           16 DDAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHG------AA-HALAVTNG-THALELALQVMGVGPGTEVIVPAF   86 (388)
T ss_dssp             CHHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTT------CS-EEEEESCH-HHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhC------CC-eEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCC
Confidence            38999999999876543 46666788999999999983      22 56677766 89999999999 889999999999


Q ss_pred             CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      +|+++...+...|.+++.++++++ ++.+|++.|++++++++++|+   |+||||.+.+   +++|.++|+++|+++|+|
T Consensus        87 ~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D  159 (388)
T 1b9h_A           87 TFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQD  159 (388)
T ss_dssp             SCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEE
T ss_pred             ccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEe
Confidence            999999999999999999998653 468999999999987666555   9999999988   899999999999999999


Q ss_pred             cccccc-ccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH--HHHHHhhhcc--------
Q 014769          220 EVYGHL-TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI--IDSIKDCLSI--------  288 (419)
Q Consensus       220 e~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--~~~l~~~~~~--------  288 (419)
                      ++|+.+ .+.+.   .+..++    ++.+.||||..+++|.|+||++++++.       +  ++.++.....        
T Consensus       160 ~a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  225 (388)
T 1b9h_A          160 AAHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDGE-------TEKYETAFLRHSCGRPRDDRR  225 (388)
T ss_dssp             CTTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTTC-------HHHHHHHHHHTBTTCCTTCSS
T ss_pred             cchhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCHH-------HHHHHHHHHHHhCCCCccCcc
Confidence            999863 33322   122222    377889997666777899999987531       3  4444332210        


Q ss_pred             --------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CCceEEEEeecCcc
Q 014769          289 --------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-----PEGSMVTMVKLNPW  355 (419)
Q Consensus       289 --------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----p~~g~~~~~~~~~~  355 (419)
                              +...+.....++...     .+++++..++++++++.+.+.|+++|++.....     +.+++++|+.++..
T Consensus       226 ~~~~~~g~~~~~~~~~~a~~~~~-----~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (388)
T 1b9h_A          226 YFHKIAGSNMRLNEFSASVLRAQ-----LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGL  300 (388)
T ss_dssp             CCCCSCCCBCBCBHHHHHHHHHH-----HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTC
T ss_pred             ceeecccccCCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCc
Confidence                    111233332222222     234666778888899999999998878763321     35578999998741


Q ss_pred             cccCCCCHHHHHHHHHHhcCeEeecCCCCCC-----------------------------CCeEEEEee--c-CHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL-----------------------------KNWLRIAFC--A-EPSALKD  403 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----------------------------~~~~Ris~~--~-~~~~l~~  403 (419)
                      .   ..+..++...| .++||.+.++.....                             .+.+||++.  . ++++++.
T Consensus       301 ~---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~  376 (388)
T 1b9h_A          301 T---EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHA  376 (388)
T ss_dssp             C---HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHH
T ss_pred             C---cccHHHHHHHH-HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHH
Confidence            0   00345677666 467999988753210                             136999994  6 8999999


Q ss_pred             HHHHHHHHHHH
Q 014769          404 GLGRMKAFCQR  414 (419)
Q Consensus       404 ~l~~l~~~~~~  414 (419)
                      +++.|++++++
T Consensus       377 ~~~~l~~~~~~  387 (388)
T 1b9h_A          377 TAEIIADAVAR  387 (388)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999998764

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=1.7e-31  Score=250.75  Aligned_cols=327  Identities=11%  Similarity=0.011  Sum_probs=235.9

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV  122 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~  122 (419)
                      ++++|+-|.      .++++.+.+++.+.+..+....+....+..++.+.+.+.+.+.+|.. ++++|++|+|+++++..
T Consensus         4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~   76 (362)
T 3ffr_A            4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER   76 (362)
T ss_dssp             CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred             cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence            467777663      34567888888877766442111122233455666666666656543 56789999999999999


Q ss_pred             HHHHhcCCCCeEEeeCCCCCC-cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769          123 ILSVLARPGANVLLPRPGWPY-YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       123 ~~~~l~~~gd~vlv~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      ++.++.++ +.+++..+.|.. +...++..|.+++.++.+  .++.+|+++++  ++++++++++++|+||||.++|   
T Consensus        77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---  148 (362)
T 3ffr_A           77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---  148 (362)
T ss_dssp             HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred             HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence            99999887 445555555542 334667789999998874  34678999988  6778999999999999999999   


Q ss_pred             HHHHHHHHHhC-CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEEEEeeCCCCccchhhHH
Q 014769          202 LQEIAEMARKL-RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       202 l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++|.++|+++ |+++|+|++|+.+...    ..+..     ..+++.|+||+++ .+|  +|++++++        +++
T Consensus       149 l~~i~~la~~~p~~~li~D~a~~~~~~~----~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~~--------~~~  209 (362)
T 3ffr_A          149 VEDINTFRDKNKDALIFVDAVSSLPYPK----FDWTK-----IDSVFFSVQKCFGLPAG--LGVWILND--------RVI  209 (362)
T ss_dssp             HHHHTTSGGGSTTSEEEEECTTTTTSSC----CCTTS-----CSEEEEETTSTTCCCSC--CEEEEEEH--------HHH
T ss_pred             HHHHHHHHHhCCCCEEEEecccccCCcc----cChhH-----CcEEEEecccccCCCCc--eEEEEECH--------HHH
Confidence            88899999999 9999999999864321    11111     2378899999987 677  57777765        455


Q ss_pred             HHHHhhhc----------------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          280 DSIKDCLS----------------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       280 ~~l~~~~~----------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      +.++....                      ..++++...+.++..+++......+++..++++++++.+.+.|+++|++.
T Consensus       210 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~  289 (362)
T 3ffr_A          210 EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS  289 (362)
T ss_dssp             HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred             HHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence            55544321                      13556777777777777643233478888999999999999999988887


Q ss_pred             CCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769          338 CPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       338 ~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~  411 (419)
                      .+ .+    ..+.++|+.++.       +..++...|.+ +||.+.+|..+..++++|++++  .++++++++++.|+++
T Consensus       290 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~  360 (362)
T 3ffr_A          290 FG-VEDAKLRSMTTIVANTTM-------LPGEINKILEP-FDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK  360 (362)
T ss_dssp             ES-SSCGGGBCSSEEEEEESS-------CHHHHHHHHGG-GTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             ec-cCChhhcCCceEEEecCC-------CHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            33 32    235677777763       46778777755 5999999977666889999995  4889999999999876


Q ss_pred             H
Q 014769          412 C  412 (419)
Q Consensus       412 ~  412 (419)
                      +
T Consensus       361 ~  361 (362)
T 3ffr_A          361 I  361 (362)
T ss_dssp             T
T ss_pred             h
Confidence            4

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=100.00  E-value=3.5e-32  Score=254.04  Aligned_cols=327  Identities=17%  Similarity=0.170  Sum_probs=224.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +..+|+|+.+...     .+++.+++++.+....  ...|.+..+..+||+++++++      +.  +++++++|+++++
T Consensus         2 ~~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~------g~--~~~~~~~~gt~a~   66 (347)
T 1jg8_A            2 PHMMIDLRSDTVT-----KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF------GK--EAALFVPSGTMGN   66 (347)
T ss_dssp             ---CEECSCGGGC-----CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHH------TC--SEEEEESCHHHHH
T ss_pred             CceEEEeccccCC-----CCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHh------CC--ceEEEecCcHHHH
Confidence            3567899999642     2457788887654321  235777678899999999998      22  4678888889999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCC-cH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCC
Q 014769          121 EVILSVLARPGANVLLPRPGWPY-YE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGN  191 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n  191 (419)
                      ..++.++.++||+|++++|+|.. +.  ..+...|.+++.+ .+  .++.+|++++++++++      ++++|++++|+|
T Consensus        67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n  143 (347)
T 1jg8_A           67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN  143 (347)
T ss_dssp             HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred             HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence            99999999999999999999864 32  2567788888877 32  2456899999999875      578899999999


Q ss_pred             cc-ccCCCHHHHHHHHHHHHhCCCeEEEcccccccc--cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE-EEee
Q 014769          192 PC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT--FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW-LVTN  267 (419)
Q Consensus       192 pt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~  267 (419)
                      || |.++|.+++++|+++|+++|+++|+|++|..+.  +.+.....+.. .. +  .++.|+||.++++   +|+ ++.+
T Consensus       144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~-d--~~~~s~sK~l~~~---~G~~~~~~  216 (347)
T 1jg8_A          144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG-YA-D--SVMFCLSKGLCAP---VGSVVVGD  216 (347)
T ss_dssp             TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH-TC-S--EEEEESSSTTCCS---SCEEEEEC
T ss_pred             ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc-cc-c--EEEEecccccCCC---ceEEEEcC
Confidence            99 999999999999999999999999999875321  11221111111 11 1  3345899987543   675 4443


Q ss_pred             CCCCccchhhHHHHHHhhhcc-c--cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCLSI-Y--SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~~~-~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      .        ++++.++..... .  ...+...+.++...++... +.++    +..++++.+.+.|+++ ++.+...+..
T Consensus       217 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~----~~~~~~~~l~~~L~~~-~~~~~~~~~~  282 (347)
T 1jg8_A          217 R--------DFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DRLK----EDHENARFLALKLKEI-GYSVNPEDVK  282 (347)
T ss_dssp             H--------HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TTHH----HHHHHHHHHHHHHHHH-TCBCCGGGCC
T ss_pred             H--------HHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HHHH----HHHHHHHHHHHHHHhc-CceeccCCCc
Confidence            2        466666544321 1  2223344444444554321 1122    2234567777777776 6653223455


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +.++|++++..    ..+..++..+|. ++||.+.++.    .+++|++++  .+++++++++++|+++++++
T Consensus       283 ~~~~~~~~~~~----~~~~~~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~  346 (347)
T 1jg8_A          283 TNMVILRTDNL----KVNAHGFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  346 (347)
T ss_dssp             SSEEEEECTTS----SSCHHHHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEcccc----cCCHHHHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence            66789988631    124678888874 6799998853    578999984  48999999999999998754

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=1.2e-31  Score=254.79  Aligned_cols=327  Identities=17%  Similarity=0.124  Sum_probs=236.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      +++.++||+.+.+..... ..+|.+.+++.+.+...... .+.+..-..++++.+++++      +  ++++++++|+++
T Consensus        34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g--~~~v~~~~~gt~  104 (392)
T 3ruy_A           34 EGNRYMDLLSAYSAVNQG-HRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT------N--KEMVLPMNTGAE  104 (392)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH------T--CSEEEEESSHHH
T ss_pred             CCCEEEEcCCChhhhccC-CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc------C--CCEEEEeCcHHH
Confidence            477899999885332111 15789999999988653221 1112234567778887776      2  689999999999


Q ss_pred             HHHHHHHHhcCC----------CCeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHHH
Q 014769          119 AVEVILSVLARP----------GANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVEA  175 (419)
Q Consensus       119 al~~~~~~l~~~----------gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~  175 (419)
                      ++..++..+..+          +|.|+++.|+|+++...+...+..             +..++.       .|++.|++
T Consensus       105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~  177 (392)
T 3ruy_A          105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA  177 (392)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence            999999987644          689999999998776555444322             233321       27999999


Q ss_pred             hhcCCccEEEEeCCCCccccCCCHHH-HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC
Q 014769          176 LADKNTAAMVIINPGNPCGNVFTYHH-LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW  254 (419)
Q Consensus       176 ~~~~~~~~v~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  254 (419)
                      ++++++++|++++|+||||.+++.++ +++|.++|+++|+++|+||+|+++.+.+... .....+...+++   |+||.+
T Consensus       178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l  253 (392)
T 3ruy_A          178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL  253 (392)
T ss_dssp             HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred             HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence            99888999999999999999995555 9999999999999999999998876655432 222223222333   678984


Q ss_pred             CCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          255 LVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       255 ~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                       .+| +|+||+++++        ++++.+.... ..+++.+++++.++..+++..  +. ++..++++++++.+.+.|++
T Consensus       254 -~gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~-~~~~~~~~~~~~~l~~~L~~  321 (392)
T 3ruy_A          254 -GGGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAVSIAALEVL--EE-EKLTERSLQLGEKLVGQLKE  321 (392)
T ss_dssp             -GTTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH--HH-TTHHHHHHHHHHHHHHHHTT
T ss_pred             -hCChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH--Hh-hhHHHHHHHHHHHHHHHHHH
Confidence             346 9999999865        4666555443 335677889999888888752  12 56778889999999999988


Q ss_pred             C--CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769          333 I--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM  408 (419)
Q Consensus       333 ~--~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l  408 (419)
                      +  +.+. ...+. |.++++.++.       +..++...| .++||.+.||.    .+++|+++  ..+++++++++++|
T Consensus       322 ~~~~~~~-~~~~~-g~~~~~~~~~-------~~~~l~~~l-~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l  387 (392)
T 3ruy_A          322 IDNPMIT-EVRGK-GLFIGIELNE-------PARPYCEQL-KAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKI  387 (392)
T ss_dssp             CCCTTEE-EEEEE-TTEEEEEESS-------CSHHHHHHH-HTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             hcCCCce-EEEee-eeEEEEEEcc-------hHHHHHHHH-HHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHH
Confidence            6  2233 22334 4455555653       356777777 47899999875    68999996  46899999999999


Q ss_pred             HHHH
Q 014769          409 KAFC  412 (419)
Q Consensus       409 ~~~~  412 (419)
                      ++++
T Consensus       388 ~~~l  391 (392)
T 3ruy_A          388 KAVL  391 (392)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9876

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=1.9e-31  Score=256.27  Aligned_cols=340  Identities=13%  Similarity=0.075  Sum_probs=233.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      .|..++||+.+.+..... ..+|.+.+++.+++.....   ..|+. ....++++.+++++      +.++++|++|+|+
T Consensus        41 ~g~~ylD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~gg  112 (429)
T 1s0a_A           41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSG  112 (429)
T ss_dssp             TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSH
T ss_pred             CCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCH
Confidence            467789999887543222 2579999999998865321   13332 22346666666665      4578899999999


Q ss_pred             HHHHHHHHHHhc---C----CCCeEEeeCCCCCCcHHHHhhc-C-------------CEEEEEeccC---CCCc-ccChH
Q 014769          117 KQAVEVILSVLA---R----PGANVLLPRPGWPYYEGIAQRK-Q-------------VEVRHFDLLP---ERNW-EVDLD  171 (419)
Q Consensus       117 ~~al~~~~~~l~---~----~gd~vlv~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~~~~  171 (419)
                      +++++.+++++.   +    |||+|++.+|+|+++...+... +             ..+..++.+.   +..+ .+|++
T Consensus       113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  192 (429)
T 1s0a_A          113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV  192 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred             HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence            999999998753   2    6899999999998764433211 1             1344555431   1123 47899


Q ss_pred             HHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769          172 AVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT  246 (419)
Q Consensus       172 ~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (419)
                      .|++++++  ....+++++|  +||||. ..+.+++++|.++|+++|+++|+||+|.++.+.+... .+...+...+++ 
T Consensus       193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~~~~~~~~~d~~-  270 (429)
T 1s0a_A          193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL-  270 (429)
T ss_dssp             HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE-
T ss_pred             HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-HhhhcCCCCCEE-
Confidence            99988863  2344566777  589996 5678999999999999999999999999765544321 222222222333 


Q ss_pred             EecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769          247 LGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL  319 (419)
Q Consensus       247 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  319 (419)
                        |+||.++ +| +|+||+++++        ++++.+...      ...+++++++++.++.++++....   ++..+++
T Consensus       271 --t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~  336 (429)
T 1s0a_A          271 --CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQV  336 (429)
T ss_dssp             --EECGGGG-TSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHH
T ss_pred             --Eeccccc-CCCccceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHH
Confidence              7899976 58 9999999865        577777653      223456788888888888764221   2345667


Q ss_pred             HHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769          320 RESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--  394 (419)
Q Consensus       320 ~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--  394 (419)
                      +++++.+.+.|+++   |++. ...+ .|.++|+.++..     .+..++...|+ ++||.+.|+     .+++||++  
T Consensus       337 ~~~~~~l~~~L~~l~~~~~~~-~~~~-~g~~~~~~~~~~-----~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~  403 (429)
T 1s0a_A          337 ADIEVQLREQLAPARDAEMVA-DVRV-LGAIGVVETTHP-----VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPY  403 (429)
T ss_dssp             HHHHHHHHHHHGGGGGCTTEE-EEEE-ETTEEEEEESSC-----BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCT
T ss_pred             HHHHHHHHHHHHHHhcCCCEE-EEEE-eeEEEEEEECCc-----ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCC
Confidence            77788888888764   4433 2123 356788887631     24667777775 679999884     37899996  


Q ss_pred             ecCHHHHHHHHHHHHHHHHHHh
Q 014769          395 CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       395 ~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ..+++++++++++|+++++++.
T Consensus       404 ~~t~e~i~~~~~~l~~~~~~~~  425 (429)
T 1s0a_A          404 IILPQQLQRLTAAVNRAVQDET  425 (429)
T ss_dssp             TCCHHHHHHHHHHHHHHTSSGG
T ss_pred             CCCHHHHHHHHHHHHHHHHhhh
Confidence            4689999999999999886654

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=100.00  E-value=4.7e-31  Score=255.64  Aligned_cols=343  Identities=14%  Similarity=0.118  Sum_probs=231.5

Q ss_pred             CCCeeeccCCCCC--CCC---CCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769           41 PRPVVPLGYGDPT--AFP---CFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG  115 (419)
Q Consensus        41 ~~~~i~l~~g~~~--~~~---~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g  115 (419)
                      +.++++|+.|.+-  ...   ..++++.+.+++.    .. ...|.+..+..++|+++++++.        .+++++|+|
T Consensus        32 g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~   98 (456)
T 2ez2_A           32 GYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFG--------FKHIVPTHQ   98 (456)
T ss_dssp             TTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESS
T ss_pred             CCCcccCCcccceeeeccccCCccCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhC--------CCcEEEeCC
Confidence            5566666666441  100   1234566655554    22 2367777788999999999982        348999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEeeCCCC-CCcHHHHhhcCCEEEEEeccCC----C----CcccChHHHHHhhcCCc----c
Q 014769          116 CKQAVEVILSVLARPGANVLLPRPGW-PYYEGIAQRKQVEVRHFDLLPE----R----NWEVDLDAVEALADKNT----A  182 (419)
Q Consensus       116 ~~~al~~~~~~l~~~gd~vlv~~p~~-~~~~~~~~~~g~~~~~~~~~~~----~----~~~~~~~~l~~~~~~~~----~  182 (419)
                      +++++..++.+++++||  +++.|+| ..+...+...|.+++.+++++.    .    ++.+|+++|++++++++    +
T Consensus        99 gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~  176 (456)
T 2ez2_A           99 GRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIA  176 (456)
T ss_dssp             HHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEE
T ss_pred             cHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhcccccee
Confidence            99999999999999999  7889999 6667788889999998887632    2    36789999999887655    7


Q ss_pred             EEEEeCCCC-ccccCCCHHHHHHHHHHHHhCCCeEEEcccccc----------cccCCCCCCCcc-ccCCCCcEEEEecC
Q 014769          183 AMVIINPGN-PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH----------LTFGSIPYTPMG-LFGSIVPVITLGSI  250 (419)
Q Consensus       183 ~v~i~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~-~~~~~~~~i~~~s~  250 (419)
                      ++++++|+| |||.+++.+++++|+++|+++|+++|+||+|+.          +.+.+....++. ..+...+++++ |+
T Consensus       177 ~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~  255 (456)
T 2ez2_A          177 YICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SG  255 (456)
T ss_dssp             EEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ET
T ss_pred             EEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eC
Confidence            888999998 999999999999999999999999999999986          344443211100 01111234544 78


Q ss_pred             CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc------ccCCchHHHHH-HHHHHcccchHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI------YSDIPTFIQGA-IPQILEKTKEDFFCKLIDTLRESA  323 (419)
Q Consensus       251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~~~~~~  323 (419)
                      +|. +++| +.||++++++       ++++.++.....      ..+.+.....+ +...++...    ++..++.+++.
T Consensus       256 kk~-~~~~-~gG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~----~~~~~~~~~~~  322 (456)
T 2ez2_A          256 KKD-CLVN-IGGFLCMNDD-------EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ----YEYIEHRVKQV  322 (456)
T ss_dssp             TTT-TCCS-SCEEEEESCH-------HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC----HHHHHHHHHHH
T ss_pred             ccc-CCCC-ceeEEEECCH-------HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH----HHHHHHHHHHH
Confidence            887 5566 7899988431       466665543221      11223222222 222222111    23444455666


Q ss_pred             HHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHH-----HHHHHHhcCeEeec-CCCC------------C
Q 014769          324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEF-----ALKLAKEESVIVTP-GIYV------------G  385 (419)
Q Consensus       324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~-----~~~ll~~~gv~v~~-g~~~------------~  385 (419)
                      +.+.+.|++. ++. +..|.+++++|+.+.... .+ .+..++     ..+|++++||.+.+ |..|            .
T Consensus       323 ~~l~~~L~~~-g~~-~~~p~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~  398 (456)
T 2ez2_A          323 RYLGDKLKAA-GVP-IVEPVGGHAVFLDARRFC-EH-LTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRP  398 (456)
T ss_dssp             HHHHHHHHHT-TCC-BCSSCCSSEEEEEHHHHT-TT-SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCC
T ss_pred             HHHHHHHhcC-CCc-cccCCCceEEEEEhHHhc-CC-CChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccC
Confidence            7777778775 776 446788999998763100 00 122333     66666788998766 4322            1


Q ss_pred             CCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769          386 LKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       386 ~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ..+++||+++   .+++++++++++|++++++..
T Consensus       399 ~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~  432 (456)
T 2ez2_A          399 KLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE  432 (456)
T ss_dssp             SCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred             CCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence            1378999996   689999999999999987643

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=6.5e-32  Score=256.80  Aligned_cols=337  Identities=14%  Similarity=0.095  Sum_probs=231.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+..++||+.|.+... ..+.++.+.+++.+++.....  ..| +.....++++.+++++      +.++++|++|+|++
T Consensus        43 ~g~~~ld~~~~~~~~~-~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~~~~~~v~~~~gg~  114 (395)
T 1vef_A           43 EGNEYIDCVGGYGVAN-LGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL------PPELNRVFPVNSGT  114 (395)
T ss_dssp             TSCEEEESSHHHHTCT-TCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS------CTTEEEEEEESSHH
T ss_pred             CCCEEEEccCcccccc-CCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc------CCCcCEEEEcCcHH
Confidence            3677899988854221 112688999999998864321  123 2233455555555554      34678999999999


Q ss_pred             HHHHHHHHHhc--CCCCeEEeeCCCCCCc-HHHHhhcCCEEEE---EeccCCCC--cccChHHHHHhhcCCccEEEEeCC
Q 014769          118 QAVEVILSVLA--RPGANVLLPRPGWPYY-EGIAQRKQVEVRH---FDLLPERN--WEVDLDAVEALADKNTAAMVIINP  189 (419)
Q Consensus       118 ~al~~~~~~l~--~~gd~vlv~~p~~~~~-~~~~~~~g~~~~~---~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p  189 (419)
                      +++..+++++.  .+||.|++++|+|++. ...+...|.+...   .++..+..  ...|++++++++++++++|+++.+
T Consensus       115 ~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~  194 (395)
T 1vef_A          115 EANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPV  194 (395)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSE
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCc
Confidence            99999998874  5789999999999764 4455555654110   11110000  014899999999877777665555


Q ss_pred             CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          190 GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       190 ~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      +||||.+. +.+++++|.++|+++|+++|+||+|+++.+.+... ++...+...+++   ||||.++. |+|+||+++++
T Consensus       195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~  269 (395)
T 1vef_A          195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMRE  269 (395)
T ss_dssp             ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEEH
T ss_pred             cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEehH
Confidence            78999865 78899999999999999999999999755444321 111222222233   78999876 89999999975


Q ss_pred             CCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceE
Q 014769          269 PNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSM  346 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~  346 (419)
                              ++++.++.. ...+++++++.+.++..+++....   .+..++++++++.+.+.|++++. ..+ ..+..|+
T Consensus       270 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~  337 (395)
T 1vef_A          270 --------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGL  337 (395)
T ss_dssp             --------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETT
T ss_pred             --------HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEE
Confidence                    466655542 123456788888888777765221   34567888888999999988632 211 1234567


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      ++|+.++.       +..++...|++++||.+.|+.    .+++||+++  .+++++++++++|++++
T Consensus       338 ~~~~~~~~-------~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          338 MVGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             EEEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcC-------hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            88888863       256777777647899999863    689999874  68999999999999875

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=100.00  E-value=8.2e-32  Score=256.52  Aligned_cols=337  Identities=14%  Similarity=0.091  Sum_probs=219.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CC-CCCCC----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KF-NCYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~-~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      ..++|.|..+.+     .++++.+.+++.+.+...  .. ..|..    .....++++.+++++      ++++++|++|
T Consensus        18 ~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~~   86 (400)
T 3vax_A           18 GSHMTYLDAAAT-----TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIFT   86 (400)
T ss_dssp             ----CCCCCCCC-----SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEEE
T ss_pred             cCCcEEecCCCC-----CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEEe
Confidence            455666666653     256788999998887531  10 01111    122456677777766      4567899999


Q ss_pred             ccHHHHHHHHHHHhc----CCCC-eEEeeCCCCCCcHHHHhh---cCCEEEEEeccCCCCcccChHHHHHhhcCCccEEE
Q 014769          114 LGCKQAVEVILSVLA----RPGA-NVLLPRPGWPYYEGIAQR---KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV  185 (419)
Q Consensus       114 ~g~~~al~~~~~~l~----~~gd-~vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  185 (419)
                      +|+++++..++.+++    ++|| .|+++.++|+++...+..   .|.+++.+++++  ++.+|+++|++++++++++++
T Consensus        87 ~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~  164 (400)
T 3vax_A           87 SGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVS  164 (400)
T ss_dssp             SCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEE
Confidence            999999999999998    8999 999999999887554443   588999988754  567899999999998899999


Q ss_pred             EeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE
Q 014769          186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV  265 (419)
Q Consensus       186 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  265 (419)
                      +++|+||||.+++   +++|.++|+++|+++|+|++|+...    ....+..+    ..+++.|+||.++.+|  +|+++
T Consensus       165 ~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~~  231 (400)
T 3vax_A          165 LMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGALV  231 (400)
T ss_dssp             CCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEEE
T ss_pred             EECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEEE
Confidence            9999999999999   8899999999999999999998522    11222222    3388899999766555  67777


Q ss_pred             -eeCCCCccchhhHHHHHH----hhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014769          266 -TNDPNGIFQKSGIIDSIK----DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN  340 (419)
Q Consensus       266 -~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  340 (419)
                       ++++........+...+.    ......++++...+.++..+++.. .+++++.+++++++++.+.+.|+ .+++.+. 
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~-  308 (400)
T 3vax_A          232 TRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVN-  308 (400)
T ss_dssp             ECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC-
T ss_pred             EecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe-
Confidence             665210000000000000    001123455666776666666542 34578888999999999999998 7788743 


Q ss_pred             CCCc---eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEe-e--
Q 014769          341 KPEG---SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAF-C--  395 (419)
Q Consensus       341 ~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~-~--  395 (419)
                      .+.+   +.++++.++.      .+..++...| . +||.+.+|..|..                   .+++||++ +  
T Consensus       309 ~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~  380 (400)
T 3vax_A          309 GDQDHVVPHILNLSFED------VDAEAFLVTL-K-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQ  380 (400)
T ss_dssp             SCTTSBCTTEEEEECTT------CCHHHHHHHH-H-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-
T ss_pred             CCcccCCCCEEEEEeCC------CCHHHHHHHH-h-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCC
Confidence            4443   3455666653      2566777777 4 7999999865532                   38999999 6  


Q ss_pred             cCHHHHHHHHHHHHHHHHH
Q 014769          396 AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       396 ~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+++++++++++|++++++
T Consensus       381 ~t~e~i~~~~~~l~~~~~~  399 (400)
T 3vax_A          381 ATDLDVEELARGVAKLKPS  399 (400)
T ss_dssp             -------------------
T ss_pred             CCHHHHHHHHHHHHHHhcc
Confidence            4789999999999988764

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=100.00  E-value=3.2e-31  Score=255.50  Aligned_cols=349  Identities=12%  Similarity=0.032  Sum_probs=231.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|+.++||+.|.+...... .+|.+.+++.+++...  ..|....|..++++.+++++.+..+.+. +++|++|+|++++
T Consensus        41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~ggsea  116 (439)
T 3dxv_A           41 NGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEG-THKIWFGHSGSDA  116 (439)
T ss_dssp             TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEEESSHHHH
T ss_pred             CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEEeCCHHHH
Confidence            4788999999987533222 6899999999998764  2455455667888888888887654322 1699999999999


Q ss_pred             HHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEE---------------EEEeccCCCCccc-----ChHHHHHhh
Q 014769          120 VEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEV---------------RHFDLLPERNWEV-----DLDAVEALA  177 (419)
Q Consensus       120 l~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~---------------~~~~~~~~~~~~~-----~~~~l~~~~  177 (419)
                      +..+++++.  .+++.|++.+|+|+++...+...+...               ..++..  ..+..     |++.|++++
T Consensus       117 ~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~l  194 (439)
T 3dxv_A          117 NEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEKL  194 (439)
T ss_dssp             HHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHHH
Confidence            999999852  366899999999987655444333221               111111  11111     688999888


Q ss_pred             ----cCCccEEEEeCCCCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          178 ----DKNTAAMVIINPGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       178 ----~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                          .++++++++..++|++|.+. +.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++...+++   ||||
T Consensus       195 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~sK  270 (439)
T 3dxv_A          195 AAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLGK  270 (439)
T ss_dssp             HTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EECG
T ss_pred             HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEcc
Confidence                33455566666677888765 5666999999999999999999999976555432 1222233222333   8999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      .++ +|+|+||++++.        ++++.+.... ..++ .+++++.++.++++....   ++..++++++++.+++.|.
T Consensus       271 ~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~  337 (439)
T 3dxv_A          271 GLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLS  337 (439)
T ss_dssp             GGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred             hhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence            987 599999999975        5666665442 2345 788888888887764321   2233344444444444443


Q ss_pred             ----cCCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHH
Q 014769          332 ----EIPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALK  402 (419)
Q Consensus       332 ----~~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~  402 (419)
                          .++.+. . .+..|.|+++.+.....   +...+..++...++ ++||.+.|+..+  .+++||++  ..++++++
T Consensus       338 ~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~  412 (439)
T 3dxv_A          338 ELAKRHPLIG-D-IRGRGLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGMN--GNVLEFTPPLTITETDIH  412 (439)
T ss_dssp             HHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEESTT--SCEEEECCCTTCCHHHHH
T ss_pred             HHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEECCCCCCHHHHH
Confidence                344433 2 33446677776621100   00012456666665 569999998533  57999987  46899999


Q ss_pred             HHHHHHHHHHHHHh
Q 014769          403 DGLGRMKAFCQRHT  416 (419)
Q Consensus       403 ~~l~~l~~~~~~~~  416 (419)
                      +++++|+++++++.
T Consensus       413 ~~l~~l~~~l~~~~  426 (439)
T 3dxv_A          413 KALDLLDRAFSELS  426 (439)
T ss_dssp             HHHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998763

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=100.00  E-value=3.7e-31  Score=253.28  Aligned_cols=336  Identities=13%  Similarity=0.099  Sum_probs=233.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|..++||+.|....... ..+|.+.+++.+++.....  ++. .+..++++.+++.+.+..|    .++|++|+|+++|
T Consensus        55 ~g~~~lD~~~~~~~~~lG-~~~p~v~~ai~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA  126 (420)
T 2pb2_A           55 QGKEYIDFAGGIAVTALG-HCHPALVEALKSQGETLWH--TSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEA  126 (420)
T ss_dssp             TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCCC--CCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred             CCCEEEEccccccccccC-CCCHHHHHHHHHHHHhccc--ccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence            477899998883221111 2578999999999875321  211 1233566666666665444    5799999999999


Q ss_pred             HHHHHHHhcC-------CC-CeEEeeCCCCCCcHHH-HhhcCCE------------EEEEeccCCCCcccChHHHHHhhc
Q 014769          120 VEVILSVLAR-------PG-ANVLLPRPGWPYYEGI-AQRKQVE------------VRHFDLLPERNWEVDLDAVEALAD  178 (419)
Q Consensus       120 l~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~  178 (419)
                      ++.+++++..       +| +.|++++|+|+++... +...|.+            +..++.       .|+++|+++++
T Consensus       127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~  199 (420)
T 2pb2_A          127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD  199 (420)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred             HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence            9999998875       67 5999999999876443 3334432            333332       27899999998


Q ss_pred             CCccEEEEeCCCCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC
Q 014769          179 KNTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP  257 (419)
Q Consensus       179 ~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  257 (419)
                      +++++|+++.++|++|. +++.+++++|.++|+++|+++|+||+|.++.+.|... .+..++...+++   ||||.++ +
T Consensus       200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~  274 (420)
T 2pb2_A          200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G  274 (420)
T ss_dssp             TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred             cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence            77888887777888884 6899999999999999999999999998776655432 112222222333   6899987 8


Q ss_pred             CceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC---
Q 014769          258 GWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI---  333 (419)
Q Consensus       258 G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---  333 (419)
                      |+|+||+++++        ++++.++.. ...+++.+++++.++.++|+....   ++..++++++++++.+.|+++   
T Consensus       275 G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~  343 (420)
T 2pb2_A          275 GFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ  343 (420)
T ss_dssp             TSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999965        455544432 223457788888888888775332   345566777777777777653   


Q ss_pred             -CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHH
Q 014769          334 -PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKA  410 (419)
Q Consensus       334 -~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~  410 (419)
                       |.+. . .+..|.++++.++...   ..+..++...|+ ++||.+.|+.    ++++|+++  ..+++++++++++|++
T Consensus       344 ~~~~~-~-~~~~g~~~~v~~~~~~---~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~  413 (420)
T 2pb2_A          344 FDIFS-D-IRGMGLLIGAELKPKY---KGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ  413 (420)
T ss_dssp             HCCEE-E-EEEETTEEEEEECGGG---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeE-E-EEecceEEEEEECCCc---hHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence             3222 1 1234667788876421   013567777775 4799999874    57999997  4689999999999999


Q ss_pred             HHHHHh
Q 014769          411 FCQRHT  416 (419)
Q Consensus       411 ~~~~~~  416 (419)
                      ++++..
T Consensus       414 ~l~~~~  419 (420)
T 2pb2_A          414 AVGKVV  419 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998754

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=100.00  E-value=3.2e-31  Score=256.00  Aligned_cols=357  Identities=13%  Similarity=0.039  Sum_probs=236.6

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|+.+|||..|.+... .-..+|.+.+++.+++....  .|....+..+.+..+++++.+..+.. ..++|++|+|+++|
T Consensus        62 ~G~~ylD~~~~~~~~~-lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA  137 (453)
T 4ffc_A           62 DGNSFIDLGAGIAVTT-VGASHPAVAAAIADQATHFT--HTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEA  137 (453)
T ss_dssp             TSCEEEESSHHHHTCT-TCTTCHHHHHHHHHHHHHCS--CCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHH
T ss_pred             CCCEEEEcCCCcccCc-CCCCCHHHHHHHHHHHHhcc--ccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHH
Confidence            4777899998844321 11248999999999987642  35544455677777777777765522 35799999999999


Q ss_pred             HHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCC--CCcccC--------hHHH
Q 014769          120 VEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPE--RNWEVD--------LDAV  173 (419)
Q Consensus       120 l~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~--~~~~~~--------~~~l  173 (419)
                      ++.+++.+..  .++.|++.+++|+++...+...+.              .+..++....  ..++.+        ++.|
T Consensus       138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l  217 (453)
T 4ffc_A          138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI  217 (453)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence            9999987753  458999999999987655544322              3444444211  111222        3556


Q ss_pred             HHhhcCCccEEEEeCCCCccc--cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCC
Q 014769          174 EALADKNTAAMVIINPGNPCG--NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS  251 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  251 (419)
                      ++.+.+++.++++++|.|++|  ...+.+++++|.++|++||+++|+||+|.++.+.|... ....++....   +.|||
T Consensus       218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-a~~~~~~~pd---i~t~s  293 (453)
T 4ffc_A          218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF-ASEHEGIVPD---IVTMA  293 (453)
T ss_dssp             HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEEC
T ss_pred             HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc-hhhhcCCCcc---hHhhh
Confidence            666655677888899988776  45688899999999999999999999999876655321 2222222222   33789


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      |.++. |+|+||+++++        ++++.+.... ..+++.+++++.++.++|+... .+..++.++.....++.+.+.
T Consensus       294 K~~~~-G~~~G~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~  364 (453)
T 4ffc_A          294 KGIAG-GMPLSAVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSAL  364 (453)
T ss_dssp             GGGGT-TSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcC-CcCeEEEEECH--------HHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            99866 99999999875        5666665443 3457788999988888887532 223333333333444444444


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCccc--ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWL--LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGL  405 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l  405 (419)
                      +..++.+. . .+..|.++++.+....  .+......++...+ .++||.+.|+..|  .+++|+++  ..+++++++++
T Consensus       365 ~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l  439 (453)
T 4ffc_A          365 AEEVDIIG-E-VRGRGAMLAIEIVKPGTLEPDAALTKSIAAEA-LSQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGI  439 (453)
T ss_dssp             HHHCSSEE-E-EEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECCEECTT--SCEEEECCCTTCCHHHHHHHH
T ss_pred             HhhCCCeE-E-EEeeceEEEEEEecCcccCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHH
Confidence            44555443 2 2344667777763200  00001234555555 5679999998654  46899987  45899999999


Q ss_pred             HHHHHHHHHHhcc
Q 014769          406 GRMKAFCQRHTKK  418 (419)
Q Consensus       406 ~~l~~~~~~~~~~  418 (419)
                      ++|++++++..++
T Consensus       440 ~~l~~~l~~~~~~  452 (453)
T 4ffc_A          440 TALSDIIRAKASH  452 (453)
T ss_dssp             HHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999987654

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.98  E-value=6.2e-31  Score=250.29  Aligned_cols=326  Identities=16%  Similarity=0.149  Sum_probs=240.4

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      .++|||+.|.|.      .++.+++++.+.+...   .|.+..+..++|+++++++.      .  +++++++|+++++.
T Consensus        30 ~~~id~~~~~~~------~~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~------~--~~~v~~~~Gt~a~~   92 (399)
T 2oga_A           30 VPFLDLKAAYEE------LRAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE------T--DHAVGVNSGMDALQ   92 (399)
T ss_dssp             BCSCCHHHHHHH------THHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT------S--SEEEEESCHHHHHH
T ss_pred             CcccccCcCCCC------CCHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC------C--CeEEEecCHHHHHH
Confidence            478999999742      2388999998887652   56666778999999999982      2  26778888899999


Q ss_pred             HHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          122 VILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       122 ~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      .++.++ +++||+|+++.|+|+++...++..|.+++.++++++ ++.+|++.+++++++++++|+   |+||||.+.+  
T Consensus        93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~--  166 (399)
T 2oga_A           93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHED-HPTLDPLLVEKAITPRTRALL---PVHLYGHPAD--  166 (399)
T ss_dssp             HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSS-SSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred             HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCC-CCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence            999999 889999999999999999999999999999987642 467999999999987666555   6789999988  


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                       +++|.++|+++|+++|+|++|+.+. +++..   +..+.    .+++.|+  ||.++.+| |+||++++++       +
T Consensus       167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~~-------~  230 (399)
T 2oga_A          167 -MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGDP-------E  230 (399)
T ss_dssp             -HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCTT----CEEEEECCTTSSSCCSS-CCEEEEESCH-------H
T ss_pred             -HHHHHHHHHHcCCEEEEECcccccCccCCee---ccccc----CEEEEeCCCCccCCcCC-ceEEEEeCCH-------H
Confidence             8999999999999999999998753 33221   11111    3778888  79988878 9999998642       4


Q ss_pred             HHHHHHhhhcc-------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          278 IIDSIKDCLSI-------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       278 ~~~~l~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      +++.++.....             .+..+.+.+.++...++.     +++..++.+++.+.+.+.|.+++++.....|..
T Consensus       231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  305 (399)
T 2oga_A          231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPD  305 (399)
T ss_dssp             HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTT
T ss_pred             HHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence            66666554321             123455665555555543     344556666778888899988878764334666


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC-----------CC------------CCeEEEEee--cCHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV-----------GL------------KNWLRIAFC--AEPS  399 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~------------~~~~Ris~~--~~~~  399 (419)
                      +.++|+.++...    .+..++...| .++||.+.++...           +.            .+++||++.  .+++
T Consensus       306 ~~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~e  380 (399)
T 2oga_A          306 TDPVWHLFTVRT----ERRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERP  380 (399)
T ss_dssp             EECCCSSEEEEC----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHH
T ss_pred             CcceeEEEEEEC----CCHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHH
Confidence            666653332210    1456677666 5679999875421           10            257999994  5899


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 014769          400 ALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~~~  416 (419)
                      +++++++.|+++++++.
T Consensus       381 di~~~~~~l~~~~~~l~  397 (399)
T 2oga_A          381 QALRVIDAVREWAERVD  397 (399)
T ss_dssp             HHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999987643

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.98  E-value=1.2e-31  Score=258.09  Aligned_cols=351  Identities=13%  Similarity=0.075  Sum_probs=231.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .|..++||+.|.+..... ..+|.+.+++.+++.....  +. ..+..+++..+++.+.+.++  .++++|++|+|++++
T Consensus        41 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea  114 (433)
T 1zod_A           41 DGRAILDFTSGQMSAVLG-HCHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANITP--PGLDRALLLSTGAES  114 (433)
T ss_dssp             TCCEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHH
T ss_pred             CCCEEEEcccchhccccC-CCCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHH
Confidence            367788998875432212 2478999999998865321  11 12223455555555555444  457899999999999


Q ss_pred             HHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhc------------CCEEEEEeccCC--CCc--------ccChHHHHH
Q 014769          120 VEVILSVLA--RPGANVLLPRPGWPYYEGIAQRK------------QVEVRHFDLLPE--RNW--------EVDLDAVEA  175 (419)
Q Consensus       120 l~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~------------g~~~~~~~~~~~--~~~--------~~~~~~l~~  175 (419)
                      ++.+++.+.  ..+++|++.+|+|+++...+...            ...+..++.+..  ..+        .+|++.|++
T Consensus       115 ~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~  194 (433)
T 1zod_A          115 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD  194 (433)
T ss_dssp             HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHH
Confidence            999998754  23589999999998765433321            013344433211  111        246889988


Q ss_pred             hhcC---CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769          176 LADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI  250 (419)
Q Consensus       176 ~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  250 (419)
                      ++++   +...+++++| +||||. +.+.+++++|.++|++||+++|+||+|+++.+.+... .+..++...+   +.|+
T Consensus       195 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~-~~~~~~~~~d---i~s~  270 (433)
T 1zod_A          195 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPD---ILTL  270 (433)
T ss_dssp             HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEE
T ss_pred             HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHh-HHhhcCCCCC---EEEe
Confidence            8863   3345666777 588996 5789999999999999999999999999876544321 1122222222   2389


Q ss_pred             CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICY  327 (419)
Q Consensus       251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  327 (419)
                      ||.++. |+|+||+++++        ++++.+....   ..+++.+++++.++.++++....   +...++++++++.+.
T Consensus       271 sK~~~~-G~~ig~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~  338 (433)
T 1zod_A          271 SKTLGA-GLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLR  338 (433)
T ss_dssp             CHHHHT-TSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred             cccccC-CCCeeEEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHH
Confidence            999875 99999999975        5777776531   13566788888888888764221   123455555666666


Q ss_pred             HHhhc----CCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCH
Q 014769          328 DGVKE----IPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEP  398 (419)
Q Consensus       328 ~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~  398 (419)
                      +.|++    ++.+. . .+..|.|+|+.++....   ....+..++...++ ++||.+.||..|+.++++||++  ..++
T Consensus       339 ~~l~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~t~  415 (433)
T 1zod_A          339 RGLLDLMERFDCIG-D-VRGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSE  415 (433)
T ss_dssp             HHHHHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCH
T ss_pred             HHHHHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCCCH
Confidence            66654    33332 2 23346677887753100   00012456777775 6799999998776568999987  4689


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 014769          399 SALKDGLGRMKAFCQRH  415 (419)
Q Consensus       399 ~~l~~~l~~l~~~~~~~  415 (419)
                      +++++++++|+++++++
T Consensus       416 ~~i~~~l~~l~~~l~~~  432 (433)
T 1zod_A          416 DEIDLGLSLLGQAIERA  432 (433)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999998765

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.98  E-value=1.7e-30  Score=249.23  Aligned_cols=336  Identities=15%  Similarity=0.131  Sum_probs=239.7

Q ss_pred             cCCCCCee--eccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           38 KNDPRPVV--PLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        38 ~~~~~~~i--~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      ...|.+++  +|+.|.|.    ++.++.+.+++.+.+..+   .|++ ..+..++|+++++++.        .+++++|+
T Consensus        10 ~~gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~   74 (424)
T 2po3_A           10 FFGGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATC   74 (424)
T ss_dssp             GGTCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEES
T ss_pred             hhcCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeC
Confidence            34566665  68888864    566889999999888653   4776 6788999999999983        25899999


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccc
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCG  194 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG  194 (419)
                      |+++++..++.++. +||+|++++|+|+++...+...|.+++.+++++ +++.+|++.+++++++++++|++++   |||
T Consensus        75 ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG  149 (424)
T 2po3_A           75 NATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWG  149 (424)
T ss_dssp             CHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGG
T ss_pred             CHHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCC
Confidence            99999999999985 789999999999999999999999999998864 3567999999999987788888754   899


Q ss_pred             cCCCHHHHHHHHHHHHhCCCeEEEccccc-ccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769          195 NVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF  273 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  273 (419)
                      ...+   +++|.++|+++|+++|+|++|+ ++.+++..   +..+.   + +++.||||.++++|.|+||++++++    
T Consensus       150 ~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~~----  215 (424)
T 2po3_A          150 RPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGRP---AGSLG---D-AEVFSFHATKAVNAFEGGAVVTDDA----  215 (424)
T ss_dssp             CCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS---S-EEEEECCTTSSSCCSSCEEEEESCH----
T ss_pred             CcCC---HHHHHHHHHHcCCEEEEECccccCCeECCee---ccccc---C-EEEEeCCCCCCccCCCCeEEEeCCH----
Confidence            9876   9999999999999999999999 46555432   22222   2 8889999666677799999998631    


Q ss_pred             chhhHHHHHHhhhcccc----------CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769          274 QKSGIIDSIKDCLSIYS----------DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE  343 (419)
Q Consensus       274 ~~~~~~~~l~~~~~~~~----------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  343 (419)
                         ++++.++.......          ....+.+.++..++..  .+.+++..++.+++++.+.+.|++++++.++..|.
T Consensus       216 ---~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~  290 (424)
T 2po3_A          216 ---DLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDR  290 (424)
T ss_dssp             ---HHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGG
T ss_pred             ---HHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCC
Confidence               46666665432110          0001112222222322  24566677778888888999998887776332244


Q ss_pred             ce----EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------------C-------CCeEEEEe--ec
Q 014769          344 GS----MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------------L-------KNWLRIAF--CA  396 (419)
Q Consensus       344 ~g----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------~-------~~~~Ris~--~~  396 (419)
                      ++    +++++.++.... + .+..++...| .++||.+.+.....              .       ...+|+++  ..
T Consensus       291 ~~~~~~~~~~i~~~~~~~-~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~  367 (424)
T 2po3_A          291 HGLNNHQYVIVEIDEATT-G-IHRDLVMEVL-KAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAI  367 (424)
T ss_dssp             GSCCCCCCEEEEECHHHH-S-SCHHHHHHHH-HHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTC
T ss_pred             CCccccEEEEEEECCccc-h-hhHHHHHHHH-HHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCC
Confidence            33    233355652100 0 1456666655 67899998732100              0       11277774  46


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 014769          397 EPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       397 ~~~~l~~~l~~l~~~~~~~  415 (419)
                      ++++++++++.|++++++.
T Consensus       368 t~e~i~~~~~~L~~~~~~~  386 (424)
T 2po3_A          368 GDDDIRRVADLLRLCATRG  386 (424)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhhh
Confidence            8999999999999988654

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.98  E-value=1.4e-31  Score=253.43  Aligned_cols=329  Identities=14%  Similarity=0.115  Sum_probs=236.0

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC--CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      ++.+.|+.|.      .++++.+.+++.+.+..    .|.+.  ....++++++++++....  ++++++|++|+|++++
T Consensus         4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~~~g~t~a   71 (385)
T 2bkw_A            4 SVDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVLAGSGTLG   71 (385)
T ss_dssp             CCCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEEESCTTHH
T ss_pred             ccceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEEcCchHHH
Confidence            4556777763      34567777776543321    22221  135677888888875422  3457899999999999


Q ss_pred             HHHHHHHhc---CCCCeEEee-CCCCCCc-HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCcc
Q 014769          120 VEVILSVLA---RPGANVLLP-RPGWPYY-EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPC  193 (419)
Q Consensus       120 l~~~~~~l~---~~gd~vlv~-~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~npt  193 (419)
                      +..++.++.   ++||+|+++ .|.|+.. ...++..|.+++.+++. +.++.+|++.|++++++ ++++|++++|+|||
T Consensus        72 l~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt  150 (385)
T 2bkw_A           72 WDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTST  150 (385)
T ss_dssp             HHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred             HHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence            999999997   899999888 4555544 35677889999998872 23567899999999876 78999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEEEEeeCCC
Q 014769          194 GNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPN  270 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~  270 (419)
                      |.+++   +++|.++|+++  |+++|+|++|+...    ....+..+   +..+++.|+||+++ .+|  +||+++++  
T Consensus       151 G~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~~G--~G~~~~~~--  216 (385)
T 2bkw_A          151 AVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDEW---GVDFALTASQKAIGAPAG--LSISLCSS--  216 (385)
T ss_dssp             TEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTTT---TCSEEEEESSSTTCCCSC--EEEEEECH--
T ss_pred             CeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----cccccccc---CceEEEecCccccccCCc--ceEEEEcH--
Confidence            99999   88999999999  99999999998522    11122222   23478899999644 456  59999865  


Q ss_pred             CccchhhHHH-HHH----------------------hhhc---c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769          271 GIFQKSGIID-SIK----------------------DCLS---I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA  323 (419)
Q Consensus       271 ~~~~~~~~~~-~l~----------------------~~~~---~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  323 (419)
                            ++++ .++                      ....   . .++++...+.++..+++......+++..+++++++
T Consensus       217 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~  290 (385)
T 2bkw_A          217 ------RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMS  290 (385)
T ss_dssp             ------HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ------HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence                  3333 221                      1111   0 23567777777777776432233677888999999


Q ss_pred             HHHHHHh-hcCCCCCCCCCC-----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEE-ee
Q 014769          324 EICYDGV-KEIPCISCPNKP-----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIA-FC  395 (419)
Q Consensus       324 ~~l~~~l-~~~~~~~~~~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris-~~  395 (419)
                      +.+.+.| +++ ++.++ .|     ..+.++|+.++        +..++...| .++||.+.+|..+. ..+++|++ ++
T Consensus       291 ~~l~~~L~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~iRis~~~  359 (385)
T 2bkw_A          291 DWFKDSLVNGL-QLTSV-SRYPSNMSAHGLTAVYVA--------DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMG  359 (385)
T ss_dssp             HHHHHHHHTTT-CCEES-SCSSSTTBCSSCEEEECS--------CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCG
T ss_pred             HHHHHHHHHhc-Cceec-ccCcccccCCceEEEecC--------CHHHHHHHH-HHCCeEEeCCCCcccCCCEEEEEccc
Confidence            9999999 887 77633 32     24778888875        256677776 56899999987653 35799999 65


Q ss_pred             -----cCHHHHHHHHHHHHHHHHH
Q 014769          396 -----AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       396 -----~~~~~l~~~l~~l~~~~~~  414 (419)
                           .+++++++++++|++++++
T Consensus       360 ~~~~~~~~e~i~~~~~~l~~~~~~  383 (385)
T 2bkw_A          360 VTACNKNLPYMKNCFDLIKLALQR  383 (385)
T ss_dssp             GGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred             cccccCCHHHHHHHHHHHHHHHHh
Confidence                 4889999999999988754

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.98  E-value=1.3e-30  Score=247.92  Aligned_cols=335  Identities=12%  Similarity=0.072  Sum_probs=230.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|+.++||+.|.+... .-..+|.+.+++.+++..... .|  ..+..++++.+++++.+..|    +++|++|+|++++
T Consensus        34 ~g~~~lD~~~~~~~~~-lG~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea  105 (395)
T 3nx3_A           34 KAKKYLDFSSGIGVCA-LGYNHAKFNAKIKAQVDKLLH-TS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES  105 (395)
T ss_dssp             TCCEEEESSHHHHTCT-TCBSCHHHHHHHHHHHTTCSC-CC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred             CCCEEEECCCcHHhcc-CCCCCHHHHHHHHHHHHhccc-cc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            4788999999854321 112579999999998875422 12  12233455555555555433    5799999999999


Q ss_pred             HHHHHHHhc-------CCCCeEEeeCCCCCCcHHHHhhcC-------------CEEEEEeccCCCCcccChHHHHHhhcC
Q 014769          120 VEVILSVLA-------RPGANVLLPRPGWPYYEGIAQRKQ-------------VEVRHFDLLPERNWEVDLDAVEALADK  179 (419)
Q Consensus       120 l~~~~~~l~-------~~gd~vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~l~~~~~~  179 (419)
                      +..+++.+.       .++|.|++.+|+|+++...+...+             .++..++.       .|+++|++++++
T Consensus       106 ~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~  178 (395)
T 3nx3_A          106 IEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE  178 (395)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT
T ss_pred             HHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC
Confidence            999998875       347999999999988754433332             23333332       278999999987


Q ss_pred             CccEEEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          180 NTAAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       180 ~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      +++++++..++|++|.. .+.+++++|.++|++||+++|+||+|.++...+... ....++....   +.|+||.++. |
T Consensus       179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~~d---~~t~sK~~~~-G  253 (395)
T 3nx3_A          179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQILPD---IMTSAKALGC-G  253 (395)
T ss_dssp             TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGTT-T
T ss_pred             CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCCCCC---EEEecccccC-C
Confidence            77777777777777775 789999999999999999999999999876554321 2222222222   3378999864 9


Q ss_pred             ceeEEEEeeCCCCccchhhH-HHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          259 WRFGWLVTNDPNGIFQKSGI-IDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~-~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      +|+||+++++        ++ ++.++... ..+++.+++++.++.++++... .+..++.++.....++.+.+.+..+|.
T Consensus       254 ~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  325 (395)
T 3nx3_A          254 LSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDF  325 (395)
T ss_dssp             SCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999865        56 66665543 3356778888888888887432 233444344444444445444444544


Q ss_pred             CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~  413 (419)
                      +. . .+..|.++++.++..     .+..++...+ .++||.+.|+.    .+++|+++  ..+++++++++++|+++++
T Consensus       326 ~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~  393 (395)
T 3nx3_A          326 CK-K-RKGLGFMQGLSLDKS-----VKVAKVIQKC-QENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALK  393 (395)
T ss_dssp             EE-E-EEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             eE-E-EEeEEEEEEEEeCCc-----chHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            33 2 234466888888642     2456777776 56799999874    68999987  4689999999999999886


Q ss_pred             H
Q 014769          414 R  414 (419)
Q Consensus       414 ~  414 (419)
                      +
T Consensus       394 ~  394 (395)
T 3nx3_A          394 S  394 (395)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.98  E-value=1.7e-30  Score=251.62  Aligned_cols=358  Identities=15%  Similarity=0.032  Sum_probs=238.6

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||+.|..... .-..+|.+.+++.+++..... .|....+..++++++++.+.+..+  .+.++|++|+|+++
T Consensus        48 ~~G~~~lD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGse  123 (460)
T 3gju_A           48 NNGRKSIDAFAGLYCVN-VGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSD  123 (460)
T ss_dssp             TTCCEEEETTHHHHTCT-TCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred             CCCCEEEECCcchhhcc-CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHH
Confidence            35888999998843211 123479999999998865322 344434555677777777776543  45679999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCC---CCcccC-----
Q 014769          119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPE---RNWEVD-----  169 (419)
Q Consensus       119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~---~~~~~~-----  169 (419)
                      +++.++++++.        +++.|++.+|+|+++...+...+.             .+..++....   ++.+.+     
T Consensus       124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~  203 (460)
T 3gju_A          124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS  203 (460)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence            99999999874        459999999999987655443321             2344443210   111223     


Q ss_pred             ---hHHHHHhhcC---CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          170 ---LDAVEALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       170 ---~~~l~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                         ++.|++++..   +..++++++| +|++|. +.+.+++++|.++|++||+++|+||+|.++.+.|... .+..++..
T Consensus       204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~  282 (460)
T 3gju_A          204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIK  282 (460)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCC
Confidence               5778877752   3344555555 667776 7789999999999999999999999999876655322 12222322


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccc-hHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTK-EDFF  312 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~-~~~~  312 (419)
                      ..++   +|||.++..++|+||+++++        ++++.+...        ...+++.+++++.++.++|+... .+.+
T Consensus       283 pdi~---t~sK~l~gG~~~lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~  351 (460)
T 3gju_A          283 PDLI---TIAKGLTSAYAPLSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLV  351 (460)
T ss_dssp             CSEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred             CCee---eeehhhcCCCCCeEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence            2233   68999644228999999976        677877531        23456788999999888887532 3445


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc--C----CCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE--D----INDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~--~----~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                      ++.++.....++.+.+.+.+++.+. . .+..|.++++.+......  .    .....++...+ .++||.+.|+.   .
T Consensus       352 ~~~~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~---~  425 (460)
T 3gju_A          352 TNAGETGAYFRAELAKAVGGHKNVG-E-VRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL-AASGVIGRAMP---Q  425 (460)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEECS---S
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeE-E-EeeeeEEEEEEEccCccccccccchHHHHHHHHHHH-HHCCeEEecCC---C
Confidence            5555566666666766666665444 2 233355667766532100  0    00134555555 55799999975   3


Q ss_pred             CCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          387 KNWLRIAF--CAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      .+++||++  ..+++++++++++|++++++..++
T Consensus       426 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~  459 (460)
T 3gju_A          426 GDILGFAPPLCLTREQADIVVSKTADAVKSVFAN  459 (460)
T ss_dssp             SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            58999996  568999999999999999887653

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.98  E-value=4e-30  Score=252.53  Aligned_cols=312  Identities=13%  Similarity=0.114  Sum_probs=231.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcE--EEcccHHHHHHHHHHHhcCCC--------CeEEeeCCCCCCcHHHH
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLSADDV--YVTLGCKQAVEVILSVLARPG--------ANVLLPRPGWPYYEGIA  148 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i--~~t~g~~~al~~~~~~l~~~g--------d~vlv~~p~~~~~~~~~  148 (419)
                      .|....+..++++.+++++.+.+|...+++++  ++|+|+++++..++++++.+|        |+|+++.|+|.++...+
T Consensus       130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~  209 (514)
T 3mad_A          130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA  209 (514)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred             ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence            44444566788899989988888876666788  999999999999999998776        99999999999999999


Q ss_pred             hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC
Q 014769          149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG  228 (419)
Q Consensus       149 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~  228 (419)
                      ...|.+++.+++++  ++.+|+++|++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+.+.+.
T Consensus       210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~  284 (514)
T 3mad_A          210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP  284 (514)
T ss_dssp             HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred             HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence            99999999998764  5689999999999988999999999999999999   899999999999999999999976541


Q ss_pred             -----CCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh------------ccccC
Q 014769          229 -----SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL------------SIYSD  291 (419)
Q Consensus       229 -----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~  291 (419)
                           |.+..++. ....+..+++.|++|. +.+|.++|++++++        +.........            ...++
T Consensus       285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gs  354 (514)
T 3mad_A          285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFAGS  354 (514)
T ss_dssp             HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSCSS
T ss_pred             hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccCCC
Confidence                 22111221 1222235778899998 56778899999876        2222211100            00112


Q ss_pred             CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHH
Q 014769          292 IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLA  371 (419)
Q Consensus       292 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll  371 (419)
                      .+.....++..++......++++..++++++++++.+.|++++++.++ .+..+ ++++..+.      .+..++...| 
T Consensus       355 ~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~-~~~~~~~~------~~~~~l~~~L-  425 (514)
T 3mad_A          355 RPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKIL-GDPLW-VIAVASDE------LNIYQVMEEM-  425 (514)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEES-SCCSS-EEEEECSS------SCHHHHHHHH-
T ss_pred             CchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCCeE-EEEEeCCC------CCHHHHHHHH-
Confidence            232222233333332224677888899999999999999998888744 44444 56665532      2566777777 


Q ss_pred             HhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHhc
Q 014769          372 KEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       372 ~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .++||.+ +|..|  ++++|+++.   ++++++++++++|++++++..+
T Consensus       426 ~~~Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~  471 (514)
T 3mad_A          426 AGRGWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA  471 (514)
T ss_dssp             HTTTCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            5569988 54433  578999985   4679999999999999987653

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.98  E-value=9.7e-31  Score=251.68  Aligned_cols=334  Identities=14%  Similarity=0.104  Sum_probs=222.8

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC---------CCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN---------SGIPPARRAIADYLSRDLPYKLSADDVYV  112 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~  112 (419)
                      .+++.|+.+.+.     ++++.+++++.+.+...  ..|+..         ....++|+++++++      ++++++|++
T Consensus        17 ~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~   83 (432)
T 3a9z_A           17 NRKVYMDYNATT-----PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDIIF   83 (432)
T ss_dssp             -CCEECBTTTCC-----CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred             CCcEEeeCCccC-----CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEEE
Confidence            467888887643     56789999999887642  133331         11358999999988      567789999


Q ss_pred             cccHHHHHHHHHHHhc--------CCCCeEEeeCCCCCCc-----------------HHHHhhcCCEEEEEeccCCCCcc
Q 014769          113 TLGCKQAVEVILSVLA--------RPGANVLLPRPGWPYY-----------------EGIAQRKQVEVRHFDLLPERNWE  167 (419)
Q Consensus       113 t~g~~~al~~~~~~l~--------~~gd~vlv~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~  167 (419)
                      |+|+++++..++.++.        ++||+|+++.|+|..+                 ...++..|.+++.++++++ ++.
T Consensus        84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~  162 (432)
T 3a9z_A           84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQ  162 (432)
T ss_dssp             ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSS
T ss_pred             eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCC
Confidence            9999999999999986        5899999999999875                 2334456899999987642 347


Q ss_pred             cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC----------CeEEEcccccccccCCCCCCCccc
Q 014769          168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR----------VMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                      +|++.|++++++++++|++++|+||||.+++   +++|.++|++++          +++|+|++|+.+.    ....+..
T Consensus       163 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~  235 (432)
T 3a9z_A          163 VEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVED  235 (432)
T ss_dssp             CCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHH
T ss_pred             cCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhh
Confidence            8999999999888899999999999999999   678899999998          9999999997632    1222222


Q ss_pred             cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh--------hhccccCCchHHHHHHHHHHcccch
Q 014769          238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD--------CLSIYSDIPTFIQGAIPQILEKTKE  309 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~l~~~~~  309 (419)
                      .+.+   +++.|+||.+   |+|+||++++++..       ...++.        .....++++...+.++.++++.. .
T Consensus       236 ~~~d---~~~~s~~K~~---g~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-~  301 (432)
T 3a9z_A          236 LGVD---FLTIVGHKFY---GPRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-S  301 (432)
T ss_dssp             HCCS---EEEEEGGGTT---CCSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-H
T ss_pred             cCCC---EEEEehhHhc---CCcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-H
Confidence            2222   5688999985   45699999975320       111111        01113456777777777777643 3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCC-----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPCISCP-NKP-----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY  383 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~  383 (419)
                      +++++..++++++++.+.+.|++++++.+. ..|     ..+..+++.++...    .+..++...+   .++.+.+|..
T Consensus       302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~i~~~~G~~  374 (432)
T 3a9z_A          302 ENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----LRGYMVLAQC---QTLLASVGAS  374 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----CCHHHHHHHC---SSEECBSSCG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----CcHHHHHHHh---cCeEEecccc
Confidence            467888899999999999999875454311 112     12324444454310    1344454433   3677776654


Q ss_pred             C---------------CC-----CCeEEEEeec--CHHHHHHHHHHHHHHHHHHhc
Q 014769          384 V---------------GL-----KNWLRIAFCA--EPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       384 ~---------------~~-----~~~~Ris~~~--~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +               +.     .+++||+++.  +++++++++++|+++++++.+
T Consensus       375 ~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~  430 (432)
T 3a9z_A          375 CHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG  430 (432)
T ss_dssp             GGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3               22     3799999964  899999999999999987643

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.97  E-value=1.4e-30  Score=251.90  Aligned_cols=352  Identities=12%  Similarity=0.035  Sum_probs=227.3

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||+.|.+... .-..+|.+.+++.+++.....   ....+..+.+..+++++.+..+  .+.+ |++|+|+++
T Consensus        46 ~~g~~~lD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggse  118 (452)
T 3n5m_A           46 IQGKRYLDGMSGLWCVN-SGYGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSE  118 (452)
T ss_dssp             TTCCEEEETTHHHHTCT-TCBCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHH
T ss_pred             CCCCEEEECCcchhhcc-CCCCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHH
Confidence            35888999999843322 123479999999999876422   1222344566666666655444  3334 999999999


Q ss_pred             HHHHHHHHhc-----C---CCCeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCccc-C-------
Q 014769          119 AVEVILSVLA-----R---PGANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEV-D-------  169 (419)
Q Consensus       119 al~~~~~~l~-----~---~gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-~-------  169 (419)
                      +++.+++.++     .   +++.|++.+|+|+++.......+..             ...++......... |       
T Consensus       119 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (452)
T 3n5m_A          119 ANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV  198 (452)
T ss_dssp             HHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence            9999999987     5   6799999999999876554444321             22333211000000 1       


Q ss_pred             --hHHHHHhhc----CCccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          170 --LDAVEALAD----KNTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       170 --~~~l~~~~~----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                        +++|+++++    ++++++++..+ +| ||.++ +.+++++|.++|++||+++|+||+|.++.+.|... ....++..
T Consensus       199 ~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~  276 (452)
T 3n5m_A          199 ECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVK  276 (452)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCC
Confidence              788888886    34445555555 79 99766 88899999999999999999999999876655422 22223322


Q ss_pred             CcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh------h-hccccCCchHHHHHHHHHHcccc-hHHH
Q 014769          242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD------C-LSIYSDIPTFIQGAIPQILEKTK-EDFF  312 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~------~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~  312 (419)
                      ..++   +|||.++. | +|+||+++++        ++++.+..      . ...+++.+++++.++.++|+... ++.+
T Consensus       277 ~di~---t~sK~l~~-G~~~ig~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~  344 (452)
T 3n5m_A          277 PDII---TMAKGITS-AYLPLSATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLI  344 (452)
T ss_dssp             CSEE---EECGGGGT-TSSCCEEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred             CCEE---eecccccC-CCcceEEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence            2233   68999866 9 9999999976        57777643      1 22356778899988888887532 2233


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC--C--CCHHHHHHHHHHhcCeEeecCCCCCC--
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED--I--NDDIEFALKLAKEESVIVTPGIYVGL--  386 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~--~--~~~~~~~~~ll~~~gv~v~~g~~~~~--  386 (419)
                      ++..+.....++.+.+.+..+|.+. . .+..|.++++.+.......  .  ....++...+ .++||.+.|+..|..  
T Consensus       345 ~~~~~~~~~l~~~L~~~~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~~~  421 (452)
T 3n5m_A          345 ERSAQMGSLLLEQLKEEIGEHPLVG-D-IRGKGLLVGIELVNDKETKEPIDNDKIASVVNAC-KEKGLIIGRNGMTTAGY  421 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEE-E-EEESSSCEEEEEEEETTTTEECCHHHHHHHHHHH-HHTTEECEECTTSSTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHH-HHCCcEEeecCcccCCC
Confidence            3333333444444444444454443 2 2334556666663211000  0  0023555555 567999999886633  


Q ss_pred             CCeEEEEe--ecCHHHHHHHHHHHHHHHHH
Q 014769          387 KNWLRIAF--CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+++||++  ..+++++++++++|++++++
T Consensus       422 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          422 NNILTLAPPLVISSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             CCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            58999986  46899999999999998764

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.97  E-value=1.9e-30  Score=251.23  Aligned_cols=353  Identities=12%  Similarity=0.020  Sum_probs=234.8

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||+.|.+... .-..+|.+.+++.+++..... .|....+..+.++++++++.+..+  .+.++|++|+|+++
T Consensus        47 ~~g~~ylD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggse  122 (459)
T 4a6r_A           47 SEGNKIIDGMAGLWCVN-VGYGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSE  122 (459)
T ss_dssp             TTCCEEEETTHHHHTCT-TCBCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHH
T ss_pred             CCCCEEEECCCchhccc-CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence            35788999998843321 112479999999999876432 344334555777777777777654  45679999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccC--C-CCcccC-----
Q 014769          119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLP--E-RNWEVD-----  169 (419)
Q Consensus       119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~~-----  169 (419)
                      +++.+++.++.        +++.|++.+|+|+++...+...+.             .+..++...  . .++ .|     
T Consensus       123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~  201 (459)
T 4a6r_A          123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG  201 (459)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence            99999999875        469999999999987655544422             223333211  0 111 23     


Q ss_pred             ---hHHHHHhhcC---CccEEEEeCCC-Ccccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          170 ---LDAVEALADK---NTAAMVIINPG-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       170 ---~~~l~~~~~~---~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                         +++|++.+..   +..++++++|. |++|. +.+.+++++|.++|++||+++|+||+|.++.+.|..+ ....++..
T Consensus       202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~  280 (459)
T 4a6r_A          202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQ  280 (459)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCC
Confidence               6778877752   34566777775 45555 5699999999999999999999999999876665422 22222322


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH---hh-hccccCCchHHHHHHHHHHcccc-hHHHHHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK---DC-LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLI  316 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~---~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~  316 (419)
                      .+++   +|||.++.+|+|+||+++++        ++++.+.   .. ...+++.+++++.++.++|+... ++.+++.+
T Consensus       281 pdi~---t~sK~l~gg~~~lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~  349 (459)
T 4a6r_A          281 PDLF---TAAKGLSSGYLPIGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVK  349 (459)
T ss_dssp             CSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             CCee---ehhhhhcCCCCCccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHH
Confidence            2333   68899766559999999965        6777776   22 23356788999999888887532 23344444


Q ss_pred             -HHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc--C----CCCHHHHHHHHHHhcCeEeecCCCCCCCCe
Q 014769          317 -DTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE--D----INDDIEFALKLAKEESVIVTPGIYVGLKNW  389 (419)
Q Consensus       317 -~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~--~----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  389 (419)
                       +.....++.+.+.|.+++.+. . .+..|.++++.+......  .    .....++...+ .++||.+.|+.     ++
T Consensus       350 ~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~  421 (459)
T 4a6r_A          350 DDIGPYMQKRWRETFSRFEHVD-D-VRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF-FRNNLIMRACG-----DH  421 (459)
T ss_dssp             HTHHHHHHHHHHHHHTTCTTEE-E-EEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH-HHTTEECEEET-----TE
T ss_pred             HHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCccccccccchHHHHHHHHHHH-HHCCeEEecCC-----CE
Confidence             344444444545555555444 2 233455666666532100  0    00034566666 45699999873     79


Q ss_pred             EEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          390 LRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       390 ~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +||++  ..+++++++++++|++++++..
T Consensus       422 iRi~~~~~~t~e~i~~~l~~l~~~l~~~~  450 (459)
T 4a6r_A          422 IVSAPPLVMTRAEVDEMLAVAERCLEEFE  450 (459)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99996  5689999999999999998764

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.97  E-value=1.9e-31  Score=250.41  Aligned_cols=327  Identities=14%  Similarity=0.079  Sum_probs=224.8

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC---CCCCCCC---CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---KFNCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      .+++|+.|.      .++++.+++++.+.+...   ....|..   ..+..++.+.+.+.+.+.+|.. ++++|++|+|+
T Consensus         3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~   75 (360)
T 1w23_A            3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGG   75 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSH
T ss_pred             ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCc
Confidence            467888774      256789999998887532   1111211   2232333344444444434432 35799999999


Q ss_pred             -HHHHHHHHHHhcCC---CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHH-hhcCCccEEEEeCCCC
Q 014769          117 -KQAVEVILSVLARP---GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGN  191 (419)
Q Consensus       117 -~~al~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~n  191 (419)
                       ++++..++..+..+   ||.|+++.++|.. ...++..| +++.++++++++ .+|++++++ ++++++++|++++|+|
T Consensus        76 gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~~~~n  152 (360)
T 1w23_A           76 ASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHITSNNT  152 (360)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEESEET
T ss_pred             chHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEeCCCC
Confidence             99999999998865   5667777666654 33456779 999998864333 378888988 8887899999999999


Q ss_pred             ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      |||.+++  ++.      +++|+++|+|++|+.+..    ..++..+     .++++|+||.++.+|  +||+++++   
T Consensus       153 ptG~~~~--~i~------~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~~---  210 (360)
T 1w23_A          153 IYGTQYQ--NFP------EINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVKK---  210 (360)
T ss_dssp             TTTEECS--SCC------CCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEEH---
T ss_pred             Ccceecc--ccc------ccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEcH---
Confidence            9999987  232      389999999999987432    1123222     278899999988666  99999875   


Q ss_pred             ccchhhHHHHHHhhh-------------ccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCC-
Q 014769          272 IFQKSGIIDSIKDCL-------------SIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCI-  336 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~-------------~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-  336 (419)
                           ++++.++...             ....+++...+.++..+++..... ++++..++++++++.+.+.|++++++ 
T Consensus       211 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  285 (360)
T 1w23_A          211 -----DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFY  285 (360)
T ss_dssp             -----HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSS
T ss_pred             -----HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence                 3333332211             112355666666676666643223 67888999999999999999988654 


Q ss_pred             CCCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          337 SCPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       337 ~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      .....|  .+++++|+.++..     .+..++..+| .++||.+.||..+  .+++|++++  .+++++++++++|++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~  357 (360)
T 1w23_A          286 VGHAEKGSRSLMNVTFNLRNE-----ELNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFK  357 (360)
T ss_dssp             EESSCGGGBCSSEEEEECSSH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             cccCCchhccCcEEEEEcCCC-----ccHHHHHHHH-HHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHH
Confidence            311123  2456889888642     1245666665 6689999988754  678999996  58899999999999887


Q ss_pred             HH
Q 014769          413 QR  414 (419)
Q Consensus       413 ~~  414 (419)
                      ++
T Consensus       358 ~~  359 (360)
T 1w23_A          358 EN  359 (360)
T ss_dssp             HH
T ss_pred             hh
Confidence            64

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.97  E-value=7.4e-31  Score=252.61  Aligned_cols=350  Identities=12%  Similarity=0.016  Sum_probs=224.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|+.++||+.|...... -..+|.+.+++.+++.......|+. ....++++++++++      + ++++|++++|++++
T Consensus        53 ~g~~ylD~~~~~~~~~l-G~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~sGsea  123 (434)
T 3l44_A           53 DGNKYIDYLAAYGPIIT-GHAHPHITKAITTAAENGVLYGTPT-ALEVKFAKMLKEAM------P-ALDKVRFVNSGTEA  123 (434)
T ss_dssp             TCCEEEECCGGGTTCSS-CBTCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHC------T-TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCchhcccc-CCCCHHHHHHHHHHHHhCcCCCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCchHHH
Confidence            58889999988643221 1258999999999987654334543 34567777777765      2 57899999999999


Q ss_pred             HHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCE-EEEEeccCCCCc--------c----cChHHHHHhhcC--Ccc
Q 014769          120 VEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPERNW--------E----VDLDAVEALADK--NTA  182 (419)
Q Consensus       120 l~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~--------~----~~~~~l~~~~~~--~~~  182 (419)
                      ++.+++.+..  +++.|++.+|+|+++...+...+.. ..........+.        .    -|+++|+++++.  ...
T Consensus       124 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  203 (434)
T 3l44_A          124 VMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEV  203 (434)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGE
T ss_pred             HHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCE
Confidence            9999998765  6799999999999865544433321 111111000000        0    178889888763  334


Q ss_pred             EEEEeCCC-CccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          183 AMVIINPG-NPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       183 ~v~i~~p~-nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      .+++++|+ |++|.+. +.+++++|.++|++||+++|+||+|.++ ..+... ....++....   +.||||.++ +|+|
T Consensus       204 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~  277 (434)
T 3l44_A          204 AAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGLP  277 (434)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTSS
T ss_pred             EEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCcC
Confidence            56666665 5556554 8999999999999999999999999987 444321 1122222222   337899986 7999


Q ss_pred             eEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          261 FGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      +||+++++        ++++.+...    ...+++.+++++.++.++++... ++.+++..+.....++.+.+.+..++.
T Consensus       278 iG~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  349 (434)
T 3l44_A          278 IGAYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNI  349 (434)
T ss_dssp             CEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eeeEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99998865        566666542    22356778888888888887432 233333333333333333333333422


Q ss_pred             CCCCCCCCceEEEEeecCccccc--------CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLE--------DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGR  407 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~  407 (419)
                      .. . .+..|.++++.+......        ......++...+ .++||.+.|+.    .+++|+++..+++++++++++
T Consensus       350 ~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~  422 (434)
T 3l44_A          350 DI-T-LNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLM-LQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEA  422 (434)
T ss_dssp             CE-E-EEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHH-HHTTEECCSST----TCCEECCTTCCHHHHHHHHHH
T ss_pred             CE-E-EEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHH-HHCCeEEeecC----CCcEEEecccCHHHHHHHHHH
Confidence            22 2 234456666666321100        000124555555 55799999875    357899888899999999999


Q ss_pred             HHHHHHHHhccC
Q 014769          408 MKAFCQRHTKKH  419 (419)
Q Consensus       408 l~~~~~~~~~~~  419 (419)
                      |+++++++.++|
T Consensus       423 l~~~l~~~~~~~  434 (434)
T 3l44_A          423 VGRAFAALADNK  434 (434)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHHhcC
Confidence            999999876543

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.97  E-value=1.4e-29  Score=240.82  Aligned_cols=317  Identities=14%  Similarity=0.101  Sum_probs=213.4

Q ss_pred             eccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC--CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH
Q 014769           46 PLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA--TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI  123 (419)
Q Consensus        46 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~  123 (419)
                      .++.|+|...+.....+++.+++...........|+  +..+..++++.+++++      +.+  ++++++++++++..+
T Consensus        24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~--~~i~~~sG~~a~~~~   95 (398)
T 2rfv_A           24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLE------RGE--AGLATASGISAITTT   95 (398)
T ss_dssp             TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHH------TCS--EEEEESSHHHHHHHH
T ss_pred             CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHh------CCC--cEEEECCHHHHHHHH
Confidence            577777653333334455555544111111112343  3345678888888877      332  566666677999999


Q ss_pred             HHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          124 LSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       124 ~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +.++.++||+|+++.|+|+++...+    ...|.+++.++.+       |++.+++++++++++|++++|+||||.+++ 
T Consensus        96 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~-  167 (398)
T 2rfv_A           96 LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD-  167 (398)
T ss_dssp             HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC-
T ss_pred             HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC-
Confidence            9999999999999999999877665    7789998888752       789999999888999999999999999998 


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~  278 (419)
                        +++|.++|+++|+++|+|++|+.+.+..    ++ .+   +..+++.|+||.++++|.|+ ||+++++        ++
T Consensus       168 --l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~--------~~  229 (398)
T 2rfv_A          168 --IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ--------EF  229 (398)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--------HH
T ss_pred             --HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH--------HH
Confidence              9999999999999999999999765431    11 22   24588999999999999998 9999865        45


Q ss_pred             HH-HHHhhhc-c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC--------------CCCCCCC
Q 014769          279 ID-SIKDCLS-I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP--------------CISCPNK  341 (419)
Q Consensus       279 ~~-~l~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~~~~  341 (419)
                      ++ .++.... . +.+.++..+.++..+++.     +....++..++.+.+.+.|++.+              ++.+. .
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~  303 (398)
T 2rfv_A          230 IDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELG-Q  303 (398)
T ss_dssp             HHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-H
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH-H
Confidence            54 5554432 2 356788888888888864     22333344555566666665532              22211 1


Q ss_pred             C---CceEEEEeecCcccccCCCCHHHHHHHHHHh---cCeEeecCCCCC----------------------C-CCeEEE
Q 014769          342 P---EGSMVTMVKLNPWLLEDINDDIEFALKLAKE---ESVIVTPGIYVG----------------------L-KNWLRI  392 (419)
Q Consensus       342 p---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~---~gv~v~~g~~~~----------------------~-~~~~Ri  392 (419)
                      |   ..|.++++.++.        ..+....++++   .|+.+.+|..|.                      . ++++|+
T Consensus       304 ~~~~~~g~~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRl  375 (398)
T 2rfv_A          304 RQMSLPGGIISFEIAG--------GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRL  375 (398)
T ss_dssp             HHCSSCCSEEEEEETT--------HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEE
T ss_pred             hhCCCCceEEEEEEcC--------CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence            1   234455667763        11222334343   378888886542                      1 579999


Q ss_pred             Eeec--CHHHHHHHHHHHHH
Q 014769          393 AFCA--EPSALKDGLGRMKA  410 (419)
Q Consensus       393 s~~~--~~~~l~~~l~~l~~  410 (419)
                      |++.  ++++++.+++.|++
T Consensus       376 s~~~~~~~~~i~~l~~al~~  395 (398)
T 2rfv_A          376 SVGLEDPEDIINDLEHAIRK  395 (398)
T ss_dssp             ECCSSCHHHHHHHHHHHHHH
T ss_pred             EecCCCHHHHHHHHHHHHHh
Confidence            9964  45666666666654

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.97  E-value=3.8e-30  Score=250.03  Aligned_cols=347  Identities=15%  Similarity=0.138  Sum_probs=230.1

Q ss_pred             CCCeeeccCCCCCC--CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           41 PRPVVPLGYGDPTA--FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        41 ~~~~i~l~~g~~~~--~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      +.++++|+.|.+-.  .+.++. +.+.+++.+.+..+. ..|.++.+..++|+++++++.        .++|++|+|+++
T Consensus        33 g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~  102 (467)
T 1ax4_A           33 GYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRG  102 (467)
T ss_dssp             TSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHH
T ss_pred             CcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHH
Confidence            55666666664310  011222 566677777665543 368777788999999999982        368999999999


Q ss_pred             HHHHHHHHhcC----CCCe---EEeeCCCCCCcHHHHhhcCCEEEEEeccC---C-----CCcccChHHHHHhhcC----
Q 014769          119 AVEVILSVLAR----PGAN---VLLPRPGWPYYEGIAQRKQVEVRHFDLLP---E-----RNWEVDLDAVEALADK----  179 (419)
Q Consensus       119 al~~~~~~l~~----~gd~---vlv~~p~~~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~~~~~l~~~~~~----  179 (419)
                      |++.++.+++.    +||.   |+++.+.|..+...+...|..++.++...   .     .++.+|++.|++++++    
T Consensus       103 A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~  182 (467)
T 1ax4_A          103 AENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGAD  182 (467)
T ss_dssp             HHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCC
Confidence            99999999988    9998   99986666666667788888877665421   1     1346899999998874    


Q ss_pred             CccEEEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEcccccc--c--------ccCCCCCCCccccC----CCCcE
Q 014769          180 NTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGH--L--------TFGSIPYTPMGLFG----SIVPV  244 (419)
Q Consensus       180 ~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~--------~~~~~~~~~~~~~~----~~~~~  244 (419)
                      ++++|++++|+||| |.+++.+++++|.++|++||+++|+|+++..  .        .+.+..   +..+.    .... 
T Consensus       183 ~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d-  258 (467)
T 1ax4_A          183 NIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNAT---IKEVIFDMYKYAD-  258 (467)
T ss_dssp             GEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCC---HHHHHHHHGGGCS-
T ss_pred             CeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCc---hhhhhhhhccccc-
Confidence            57889999999999 8999999999999999999999999998653  1        122221   11111    0111 


Q ss_pred             EEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhc------cccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          245 ITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLS------IYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       245 i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                      +++.|+||.++++ |   |+++++++.      ++++.+.....      ...+.+.....++...++....   ++..+
T Consensus       259 ~~~~s~sK~~g~~~G---g~~~~~d~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~  326 (467)
T 1ax4_A          259 ALTMSAKKDPLLNIG---GLVAIRDNE------EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLH  326 (467)
T ss_dssp             EEEEETTSTTCCSSC---EEEEESSCH------HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHH
T ss_pred             eEEEeccccCCCCcc---eEEEeCCHH------HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHH
Confidence            4567999997665 3   677665320      24554443321      1122233333333334443221   11222


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc--cc-CCCCHHHHHHHHHHhcCeEeec-CCCC-------C-
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL--LE-DINDDIEFALKLAKEESVIVTP-GIYV-------G-  385 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~v~~-g~~~-------~-  385 (419)
                      +..++++.+.+.|++ +++. +..|.+|+++|+.+....  .. ...+..+++..|+.++||.+.| |..+       + 
T Consensus       327 ~~~~~~~~l~~~L~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~  404 (467)
T 1ax4_A          327 YRIGQVKYLGDRLRE-AGIP-IQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGE  404 (467)
T ss_dssp             HHHHHHHHHHHHHHH-TTCC-BCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred             HHHHHHHHHHHHHHh-CCCC-cccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCcccccccccccc
Confidence            333566778888877 3777 337888999999832100  00 0013567777776888999999 5431       1 


Q ss_pred             ----CCCeEEEEee---cCHHHHHHHHHHHHHHHHHH
Q 014769          386 ----LKNWLRIAFC---AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       386 ----~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~  415 (419)
                          ..+++||++.   .+++++++++++|++++++.
T Consensus       405 ~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~  441 (467)
T 1ax4_A          405 QKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF  441 (467)
T ss_dssp             BCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred             ccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence                1379999996   68999999999999998774

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.97  E-value=4.6e-31  Score=247.98  Aligned_cols=325  Identities=13%  Similarity=0.089  Sum_probs=227.7

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-c-EEE
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRAIADYLSRDLPYKLSAD-D-VYV  112 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~-i~~  112 (419)
                      .+++++.|.      .++++.+++++.+.+.+..        ...|.+  +..++++.+.+.+.+.+|.  +++ + +++
T Consensus         4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~~i~~   73 (362)
T 2c0r_A            4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGN--PTGYKVLFI   73 (362)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred             ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence            466777773      4678999999988775320        011211  2345677777777776664  343 5 578


Q ss_pred             cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCc--ccChHHHHHhhcCCccEEEEeC
Q 014769          113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNW--EVDLDAVEALADKNTAAMVIIN  188 (419)
Q Consensus       113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~i~~  188 (419)
                      |+|++++++.++.+++++||+|+++++.++..  ...++..| +++.++++++.++  .+|.++++  +++++++|++++
T Consensus        74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~  150 (362)
T 2c0r_A           74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS  150 (362)
T ss_dssp             SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence            89999999999999999999999887765543  35667779 9988887632222  34655543  566889999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      |+||||..++  ++++|      +|+++|+|++|+.+..    ...+..+     .+++.|+||+++++|  +||+++++
T Consensus       151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~----~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~  211 (362)
T 2c0r_A          151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR----PFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE  211 (362)
T ss_dssp             EETTTTEECS--SCCCC------TTSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred             CcCccceecc--ccccc------CCCEEEEEChhhccCC----ccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence            9999999743  25555      7999999999986432    1222222     277789999998788  99999976


Q ss_pred             CCCccchhhHHHHHHh-------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          269 PNGIFQKSGIIDSIKD-------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                      +        +++.+..             .....++++...+.++..+++..... .+++.+++++++++.+.+.|++++
T Consensus       212 ~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  283 (362)
T 2c0r_A          212 D--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG  283 (362)
T ss_dssp             G--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             H--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            2        2221111             11224577888888888888753333 688889999999999999999884


Q ss_pred             CC-CCCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHH
Q 014769          335 CI-SCPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMK  409 (419)
Q Consensus       335 ~~-~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~  409 (419)
                      ++ .+...+  .++.++++.++..     .+..+++..| .++||.+.||..+  .+++|+|++  .++++++++++.|+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~  355 (362)
T 2c0r_A          284 GFYRGCVDVDSRSDMNITFRLASE-----ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFME  355 (362)
T ss_dssp             TSSEESSCGGGBCSSEEEEECSCH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CccccCCChHHcCCcEEEEEcCCc-----chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHH
Confidence            35 422222  2345677777631     1356677665 6779999888765  467999996  47999999999999


Q ss_pred             HHHHHH
Q 014769          410 AFCQRH  415 (419)
Q Consensus       410 ~~~~~~  415 (419)
                      ++++++
T Consensus       356 ~~~~~~  361 (362)
T 2c0r_A          356 HFKRSR  361 (362)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998765

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.2e-29  Score=248.43  Aligned_cols=331  Identities=13%  Similarity=0.080  Sum_probs=244.2

Q ss_pred             CChHHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-----C
Q 014769           59 RTAVEAEDAIVDAVRSG---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-----P  130 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-----~  130 (419)
                      +.++.+.+++.+++...   ....|....|..++++.+++++.+.+|...+++++++++|+++++..++.++++     +
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~  154 (497)
T 3mc6_A           75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR  154 (497)
T ss_dssp             CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence            34477777777776542   223455566778999999999999888776788999999999999999999865     5


Q ss_pred             C---CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHH
Q 014769          131 G---ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE  207 (419)
Q Consensus       131 g---d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  207 (419)
                      |   |+|+++.|+|..+...+...|.+++.+++++ .++.+|+++|++++++++++|++++|+||||.+.+   +++|.+
T Consensus       155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~  230 (497)
T 3mc6_A          155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK  230 (497)
T ss_dssp             CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred             CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence            6   8999999999999999999999999998764 35689999999999988999999999999999988   889999


Q ss_pred             HHHhCCCeEEEcccccccccC-----CCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769          208 MARKLRVMVVADEVYGHLTFG-----SIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS  281 (419)
Q Consensus       208 ~~~~~~~~li~De~~~~~~~~-----~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  281 (419)
                      +|+++|+++|+|++|+.+...     +.+.. ++ .....+..+++.|++|. +.+|.++|++++++        +....
T Consensus       231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~-~~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~  300 (497)
T 3mc6_A          231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL-DFRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM  300 (497)
T ss_dssp             HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC-STTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred             HHHHhCCEEEEECcchhhhhhhhhhhcccCCccc-cccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence            999999999999999865321     11111 11 11122234778899997 57788899999876        23322


Q ss_pred             HHhhhccc------------cCCc---hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCce
Q 014769          282 IKDCLSIY------------SDIP---TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGS  345 (419)
Q Consensus       282 l~~~~~~~------------~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g  345 (419)
                      ........            ++.+   ..++.++...+.   ...+++..++..++++++.+.|++ +|++.++..|..+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~  377 (497)
T 3mc6_A          301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG---ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS  377 (497)
T ss_dssp             TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS
T ss_pred             hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee
Confidence            21111000            0111   223444444443   466788888999999999999998 6898855455555


Q ss_pred             EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769          346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      ++.| ..+.      .+..++...| .++||.+.++..   +..+|+++. .++++++++++.|++++++..+
T Consensus       378 ~v~~-~~~~------~~~~~l~~~L-~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~  439 (497)
T 3mc6_A          378 VISF-SSKT------LNIHELSDRL-SKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELKS  439 (497)
T ss_dssp             EEEE-ECTT------TTHHHHHHHH-HTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred             EEEE-eCCC------CCHHHHHHHH-HhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence            5544 4432      2466777776 556999877543   347899985 5789999999999999987754

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.97  E-value=4e-29  Score=239.27  Aligned_cols=329  Identities=17%  Similarity=0.177  Sum_probs=226.9

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEee
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLP  137 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~  137 (419)
                      +.++.+.+++.+.+.......|++..|..++++.+.+.+.+.+|.  +  ++++++++++++..++.++ .++||+|+++
T Consensus        13 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~--~--~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~   88 (418)
T 2c81_A           13 QHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV--P--YCVPTTSGSTALMLALEALGIGEGDEVIVP   88 (418)
T ss_dssp             CCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC--S--EEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             CCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC--C--cEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence            347899999999987665545877778544444444444443332  2  5677777899999999999 8899999999


Q ss_pred             CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769          138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  217 (419)
                      .|+|.++...+...|.+++.+++++ .++.+|++.+++++++++++|++   +||||...+   +++|.++|+++|+++|
T Consensus        89 ~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~~~---~~~i~~~~~~~~~~li  161 (418)
T 2c81_A           89 SLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIP---VHLFGSMAN---MDEINEIAQEHNLFVI  161 (418)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECC---BCCTTCCCC---HHHHHHHHHHTTCEEE
T ss_pred             CCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEE---eCCcCCccc---HHHHHHHHHHCCCEEE
Confidence            9999999999999999999998754 35789999999999877777765   458999877   8999999999999999


Q ss_pred             Ecccccccc-cCCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-----
Q 014769          218 ADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-----  289 (419)
Q Consensus       218 ~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-----  289 (419)
                      +|++|+.+. +++..   +..+.    .+.+.||  ||.++. | |+||++++++       ++++.++......     
T Consensus       162 ~D~a~~~~~~~~~~~---~~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~~-------~l~~~~~~~~~~~~~~~~  225 (418)
T 2c81_A          162 EDCAQSHGSVWNNQR---AGTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKNP-------RLFELIQQLRADSRVYCD  225 (418)
T ss_dssp             EECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCS-S-SCEEEEESCH-------HHHHHHHHHHBTTEEECS
T ss_pred             EECcccccCccCCEe---ccccc----ceEEEeccCCcccCC-C-CeEEEEECCH-------HHHHHHHHHHHhCccccc
Confidence            999999875 54422   12222    1667777  999876 7 9999998542       4666665432210     


Q ss_pred             --------cC--C---c--------hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc-eEE
Q 014769          290 --------SD--I---P--------TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG-SMV  347 (419)
Q Consensus       290 --------~~--~---~--------~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~-g~~  347 (419)
                              +.  .   .        ...+.++..  ..  .+.+++..++.+++++.+.+.|.++|++.+...|.+ +..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~--~~--l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~  301 (418)
T 2c81_A          226 DSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILL--DQ--LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQ  301 (418)
T ss_dssp             CGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHH--HH--HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEEC
T ss_pred             cccccccchhhccccccccCcCCCcCHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCccc
Confidence                    00  0   0        111222211  11  123566677777788899999988888773324555 333


Q ss_pred             EE----eecCcccccCCCCHHHHHHHHHHhcCeE---eecCCCCC----------------------------C------
Q 014769          348 TM----VKLNPWLLEDINDDIEFALKLAKEESVI---VTPGIYVG----------------------------L------  386 (419)
Q Consensus       348 ~~----~~~~~~~~~~~~~~~~~~~~ll~~~gv~---v~~g~~~~----------------------------~------  386 (419)
                      .|    +.++.....+ .+..++...|.+++||.   +.++....                            .      
T Consensus       302 ~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (418)
T 2c81_A          302 TYYGYVFRFDPVKFGG-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSER  380 (418)
T ss_dssp             CCSEEEEEECGGGTTT-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHH
T ss_pred             ccEEEEEEEccccccc-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHH
Confidence            22    5665310001 24677877775545999   88775220                            0      


Q ss_pred             --CCeEEEEe--ec-CHHHHHHHHHHHHHHHHHHhccC
Q 014769          387 --KNWLRIAF--CA-EPSALKDGLGRMKAFCQRHTKKH  419 (419)
Q Consensus       387 --~~~~Ris~--~~-~~~~l~~~l~~l~~~~~~~~~~~  419 (419)
                        .+.+||++  .. ++++++.+++.|+++++++..+|
T Consensus       381 ~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~~~  418 (418)
T 2c81_A          381 ASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCVTH  418 (418)
T ss_dssp             HHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC---
T ss_pred             HHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhccCC
Confidence              14899999  46 89999999999999998877665

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.97  E-value=2.3e-30  Score=249.87  Aligned_cols=353  Identities=15%  Similarity=0.030  Sum_probs=230.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|+.++||..|.+... .-..+|.+.+++.+++....  .|....+..+.+.++++++.+..+. ...++|++|+|+++|
T Consensus        59 ~g~~ylD~~~~~~~~~-lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA  134 (451)
T 3oks_A           59 DGNRLIDLGSGIAVTT-VGNSAPKVVEAVRSQVGDFT--HTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSEA  134 (451)
T ss_dssp             TSCEEEESSHHHHTCT-TCTTCHHHHHHHHHHHTTCS--CCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHHH
T ss_pred             CCCEEEEcCCCccccc-cCCCCHHHHHHHHHHHHhcc--cccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHHH
Confidence            4777899998844321 11247999999999987642  4554456667888888888776552 235799999999999


Q ss_pred             HHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCC--------CCcc---cChHH
Q 014769          120 VEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPE--------RNWE---VDLDA  172 (419)
Q Consensus       120 l~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~--------~~~~---~~~~~  172 (419)
                      ++.+++.+..  .++.|++.+++|+++...+...+.              .+..++....        +...   .+++.
T Consensus       135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  214 (451)
T 3oks_A          135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR  214 (451)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence            9999988764  448999999999987655544322              3444543210        0000   12333


Q ss_pred             HHHhh----cCCccEEEEeCCCCccc--cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769          173 VEALA----DKNTAAMVIINPGNPCG--NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT  246 (419)
Q Consensus       173 l~~~~----~~~~~~v~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (419)
                      +++.+    ..++.++++++|.|++|  ...+.+++++|.++|++||+++|+||+|.++.+.|.. ..+..++...+++ 
T Consensus       215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pdi~-  292 (451)
T 3oks_A          215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPDLI-  292 (451)
T ss_dssp             HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE-
T ss_pred             HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCCee-
Confidence            33333    33567788888876665  3558888999999999999999999999987665542 2223333322333 


Q ss_pred             EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAE  324 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~  324 (419)
                        ||||.++. |+|+||+++++        ++++.+.... ..+++.+++++.++.++|+.... +..++..+.....++
T Consensus       293 --t~sK~l~~-G~~iG~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~  361 (451)
T 3oks_A          293 --VTAKGIAG-GLPLSAVTGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKD  361 (451)
T ss_dssp             --EECGGGGT-TSSCEEEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             --eehhhhhC-CcceEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence              88999865 99999999875        5666665433 34577889999888888875322 233333333334444


Q ss_pred             HHHHHhhcCCCCCCCCCCCceEEEEeecCccc--ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHH
Q 014769          325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL--LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSA  400 (419)
Q Consensus       325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~  400 (419)
                      .+.+.+..++.+. . .+..|.++++.+....  .+......++...+ .++||.+.|+..|  .+++|+++  ..++++
T Consensus       362 ~L~~~~~~~~~~~-~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~  436 (451)
T 3oks_A          362 RLGRLQAEDDRIG-D-VRGRGAMIAMELVKAGTTEPDADLTKALCAGA-HAAGVIVLSCGTY--GNVVRFLPPLSIGDDL  436 (451)
T ss_dssp             HHHHHHHHCTTEE-E-EEEETTEEEEEEBSTTSCCBCHHHHHHHHHHH-HHTTEECEEECTT--SCEEEECCCTTCCHHH
T ss_pred             HHHHHHhhCCCeE-E-EEEeeEEEEEEEecCccCCCCHHHHHHHHHHH-HhCCcEEecCCCC--CCEEEEECCCCCCHHH
Confidence            4444444455443 2 2334667777663200  00001234565555 5679999998654  36899987  458999


Q ss_pred             HHHHHHHHHHHHHH
Q 014769          401 LKDGLGRMKAFCQR  414 (419)
Q Consensus       401 l~~~l~~l~~~~~~  414 (419)
                      +++++++|++++++
T Consensus       437 i~~~l~~l~~~l~~  450 (451)
T 3oks_A          437 LNEGLDVLEEVLRG  450 (451)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998864

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.97  E-value=2e-29  Score=239.51  Aligned_cols=325  Identities=13%  Similarity=0.125  Sum_probs=231.0

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV  122 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~  122 (419)
                      ++|+|+.  |    .+  ++.+.+++.+.+....   |.+..+..++|+++++++      +  .+++++++|+++++..
T Consensus         9 ~~i~~~~--p----~~--~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~------~--~~~~~~~~~gt~al~~   69 (393)
T 1mdo_A            9 DFLPFSR--P----AM--GAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLT------G--NQYAVAVSSATAGMHI   69 (393)
T ss_dssp             CCBCSCC--C----CC--CHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHH------C--CSEEEEESCHHHHHHH
T ss_pred             cccccCC--C----CC--CHHHHHHHHHHHhcCC---cCCChHHHHHHHHHHHHh------C--CCcEEEecChHHHHHH
Confidence            4678775  3    23  3677888888886542   334568899999999998      2  2489999999999999


Q ss_pred             HHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769          123 ILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       123 ~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      ++.++ .++||+|+++.|+|+++...++..|.+++.+++++ +++.+|++.+++++++++++|+++   ||||...+   
T Consensus        70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~---  142 (393)
T 1mdo_A           70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD---  142 (393)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---
T ss_pred             HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---
Confidence            99999 89999999999999999999999999999998764 346799999999998777777665   48999887   


Q ss_pred             HHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          202 LQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       202 l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      +++|.++|+++|+++|+|++|+.+ .+.+..   +   +.  ..+++.|+||..+++|.|+||++++++       ++++
T Consensus       143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~-------~~~~  207 (393)
T 1mdo_A          143 LDAIYALGERYGIPVIEDAAHATGTSYKGRH---I---GA--RGTAIFSFHAIKNITCAEGGIVVTDNP-------QFAD  207 (393)
T ss_dssp             HHHHHHHHHHHTCCBCEECTTCTTCEETTEE---T---TS--SSEEEEECCTTSSSCSSSCEEEEESCH-------HHHH
T ss_pred             HHHHHHHHHHcCCeEEEECccccCCeECCee---c---CC--CCeEEEeCCCCCccccccceEEEeCCH-------HHHH
Confidence            899999999999999999999963 343321   1   11  458889999333455668999998642       4666


Q ss_pred             HHHhhhccc-------------------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          281 SIKDCLSIY-------------------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       281 ~l~~~~~~~-------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      .++......                         ...+.+...++...++     .+++..++.+++++.+.+.|.+++ 
T Consensus       208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~-  281 (393)
T 1mdo_A          208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-----KLDALNARRAAIAAQYHQAMADLP-  281 (393)
T ss_dssp             HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTSS-
T ss_pred             HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            665432211                         0123332222222232     245566666778888888998874 


Q ss_pred             CCCCCCC-----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------------CC-------CCe
Q 014769          336 ISCPNKP-----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------------GL-------KNW  389 (419)
Q Consensus       336 ~~~~~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------------~~-------~~~  389 (419)
                      +.....|     .+++++|+.++....  ..+..++...| .++||.+.+|..+              ..       ..+
T Consensus       282 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (393)
T 1mdo_A          282 FQPLSLPSWEHIHAWHLFIIRVDEARC--GITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI  358 (393)
T ss_dssp             CEECCCCSSCEECCCSCEEEECCHHHH--SSCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred             cccccCCCCCCCceeEEEEEEeccccc--ccCHHHHHHHH-HhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence            5522123     455678888863100  02466777666 5679999987654              11       347


Q ss_pred             EEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          390 LRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       390 ~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +|+++.  .++++++++++.|+++++.+..
T Consensus       359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~~~  388 (393)
T 1mdo_A          359 CSLPLFPDMTESDFDRVITALHQIAGQGSH  388 (393)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHC----
T ss_pred             EEecCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence            999996  6899999999999999876644

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.97  E-value=5.4e-30  Score=246.04  Aligned_cols=335  Identities=14%  Similarity=0.119  Sum_probs=220.3

Q ss_pred             CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      +|..++||+.|.+..  .++ .+|.+.+++.+++.....  ..|. .....++++.+++++    |    .++|++++|+
T Consensus        63 ~G~~ylD~~~g~~~~--~lgh~~p~v~~ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----g----~~~v~~~~sG  131 (433)
T 1z7d_A           63 NDKRYYDFLSAYSSV--NQGHCHPNILNAMINQAKNLTICSRAFF-SVPLGICERYLTNLL----G----YDKVLMMNTG  131 (433)
T ss_dssp             TCCEEEESSHHHHTT--TTCBTCHHHHHHHHHHHTTCSCCCTTSE-EHHHHHHHHHHHHHH----T----CSEEEEESSH
T ss_pred             CCCEEEEcccchhhc--ccCCCCHHHHHHHHHHHHhCCCccCCcC-CHHHHHHHHHHHhhc----C----CCeEEEeCCH
Confidence            467789998875431  244 789999999999876432  1121 122345555665554    2    5799999999


Q ss_pred             HHHHHHHHHHhc---------CCC-CeEEeeCCCCCCcHHH-HhhcC------------CEEEEEeccCCCCcccChHHH
Q 014769          117 KQAVEVILSVLA---------RPG-ANVLLPRPGWPYYEGI-AQRKQ------------VEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus       117 ~~al~~~~~~l~---------~~g-d~vlv~~p~~~~~~~~-~~~~g------------~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++|++.+++.+.         .+| |.|++++|+|+++... +...|            .++..++.       .|++.|
T Consensus       132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l  204 (433)
T 1z7d_A          132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL  204 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence            999999998864         367 9999999999876432 22223            12233322       278999


Q ss_pred             HHhhc-CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769          174 EALAD-KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI  250 (419)
Q Consensus       174 ~~~~~-~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  250 (419)
                      +++++ ++++ +++++| +|++|.+ ++.+++++|.++|+++|+++|+||+|.++.+.+... .+..++...+++   |+
T Consensus       205 e~~l~~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di~---t~  279 (433)
T 1z7d_A          205 EEELKDPNVC-AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---LL  279 (433)
T ss_dssp             HHHHTSTTEE-EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EE
T ss_pred             HHHhCCCCEE-EEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCEE---EE
Confidence            99984 4454 455556 5678975 688899999999999999999999998765555322 122222222233   88


Q ss_pred             CCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       251 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      ||.++ +| +|+||+++++        ++++.+... ...+++.+++++.++.++|+....   ++..++++++++++.+
T Consensus       280 sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~  347 (433)
T 1z7d_A          280 GKALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLE  347 (433)
T ss_dssp             CGGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred             Ccccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence            99976 79 9999999865        466555443 233566788888888777765321   2345566667777777


Q ss_pred             HhhcC-CCCCCC-CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHH
Q 014769          329 GVKEI-PCISCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDG  404 (419)
Q Consensus       329 ~l~~~-~~~~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~  404 (419)
                      .|+++ .++..+ ..+..|.++++.++...    .+..++...|+ ++||.+.|+.    .+++|+++.  .++++++++
T Consensus       348 ~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~----~~~~~~~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~  418 (433)
T 1z7d_A          348 NLKRELKDSKIVRDVRGKGLLCAIEFKNEL----VNVLDICLKLK-ENGLITRDVH----DKTIRLTPPLCITKEQLDEC  418 (433)
T ss_dssp             HHHHHHTTCTTEEEEEEETTEEEEEECTTT----CCHHHHHHHHH-HTTEECCEET----TTEEEECCCTTCCHHHHHHH
T ss_pred             HHHHHHHhCCCeEEEEeeeeEEEEEEccCh----hHHHHHHHHHH-HCCeEEecCC----CCEEEEECCcCCCHHHHHHH
Confidence            76653 122211 12345677888886421    13567777775 5799998862    579999874  689999999


Q ss_pred             HHHHHHHHHHHhcc
Q 014769          405 LGRMKAFCQRHTKK  418 (419)
Q Consensus       405 l~~l~~~~~~~~~~  418 (419)
                      +++|++++++...|
T Consensus       419 l~~l~~~l~~~~~~  432 (433)
T 1z7d_A          419 TEIIVKTVKFFDER  432 (433)
T ss_dssp             HHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999887655

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.97  E-value=8.9e-30  Score=243.73  Aligned_cols=322  Identities=13%  Similarity=0.080  Sum_probs=227.0

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-----CCC--CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-----CYA--TNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      ++++.|+.+.+.     +.++.+.+++.+.+......     .|.  ......++++.+++++      +.++++|++|+
T Consensus        27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~   95 (416)
T 1qz9_A           27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVTD   95 (416)
T ss_dssp             TTCEECCTTTSC-----CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEECS
T ss_pred             CCeEeecCCCcC-----CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEeC
Confidence            457788777542     45678889998888653111     111  0133456777777765      45678999999


Q ss_pred             cHHHHHHHHHHHhc------CCCCeEEee-CCCCCCcHHH----Hhhc--CCEEEEEeccCCCCcccChHHHHHhhcCCc
Q 014769          115 GCKQAVEVILSVLA------RPGANVLLP-RPGWPYYEGI----AQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNT  181 (419)
Q Consensus       115 g~~~al~~~~~~l~------~~gd~vlv~-~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  181 (419)
                      |+++++..++.++.      ++||+|++. .++|+.+...    ....  |.+++.+++         ++++++++++++
T Consensus        96 g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~~  166 (416)
T 1qz9_A           96 TTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQDT  166 (416)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTTE
T ss_pred             ChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCCc
Confidence            99999998888876      889875555 5567654332    2223  888887764         678888888888


Q ss_pred             cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee
Q 014769          182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF  261 (419)
Q Consensus       182 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  261 (419)
                      ++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+..    .....+..++   ..+++.|+||.+ .+|.++
T Consensus       167 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~---~d~~~~s~~K~l-~~g~~~  235 (416)
T 1qz9_A          167 AVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAG----AVPVDLHQAG---ADYAIGCTYKYL-NGGPGS  235 (416)
T ss_dssp             EEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCHHHHT---CSEEEECSSSTT-CCCTTC
T ss_pred             eEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEcccccc----CcCCChhhcC---CCEEEecCcccC-CCCCCC
Confidence            99999999999999999   899999999999999999999842    1111222222   237888999984 567777


Q ss_pred             -EEEEeeCCCCccchhhHHHHHHhh------------------------hccccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          262 -GWLVTNDPNGIFQKSGIIDSIKDC------------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       262 -G~~~~~~~~~~~~~~~~~~~l~~~------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                       |+++++++        +++.++..                        ....++++...+.++.++++....+++++..
T Consensus       236 ~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~  307 (416)
T 1qz9_A          236 QAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLR  307 (416)
T ss_dssp             CCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred             eEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHH
Confidence             99998753        22222211                        0112356666777766677653334577888


Q ss_pred             HHHHHHHHHHHHHhhcC-C--CCCCCCCCC----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCe
Q 014769          317 DTLRESAEICYDGVKEI-P--CISCPNKPE----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNW  389 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~-~--~~~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  389 (419)
                      ++++++++.+.+.|+++ |  ++.++ .|.    .+.++|+.++        +..++...| .++||.+...    ..++
T Consensus       308 ~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~~~~l~~~l-~~~gi~~~~~----~~~~  373 (416)
T 1qz9_A          308 RKSLALTDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPRI  373 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTTE
T ss_pred             HHHHHHHHHHHHHHHhhccCCCeEEe-CCCCHHHcCCEEEEecC--------CHHHHHHHH-HhCCcEeccC----CCCe
Confidence            89999999999999874 6  77633 442    3557888875        356677666 5679987532    3679


Q ss_pred             EEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769          390 LRIAFC---AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       390 ~Ris~~---~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +|++++   .+++++++++++|++++++..
T Consensus       374 lRis~~~~~~t~~~i~~~~~~l~~~~~~~~  403 (416)
T 1qz9_A          374 MRFGFTPLYTTFTEVWDAVQILGEILDRKT  403 (416)
T ss_dssp             EEEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence            999996   489999999999999987653

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.97  E-value=8.9e-30  Score=247.49  Aligned_cols=346  Identities=11%  Similarity=0.040  Sum_probs=239.9

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHHHHHHhhCCCCCCC--CcEEEc
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIADYLSRDLPYKLSA--DDVYVT  113 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~t  113 (419)
                      .+.|+|..+.+      ++++.+.+++.+.+.+....+      |+...+..++++.+.+++.+.+|...+.  .+|+++
T Consensus        44 ~~~i~L~a~e~------~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~  117 (483)
T 1rv3_A           44 RVGLELIASEN------FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY  117 (483)
T ss_dssp             HSSEECCTTCC------CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             hcCeEEEcCCC------CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence            46799977642      467899999988876532112      3333345678888888888877755322  348888


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH--------HHhhcC--CEEEEEeccCCCCcccChHHHHHhhc-CCcc
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEG--------IAQRKQ--VEVRHFDLLPERNWEVDLDAVEALAD-KNTA  182 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~--------~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~  182 (419)
                      +|+ +++..++.++++|||+|++++|+|.++..        .+...|  ...+.+++++ .++.+|+++|+++++ ++++
T Consensus       118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk  195 (483)
T 1rv3_A          118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK  195 (483)
T ss_dssp             SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence            888 88888899999999999999999887643        223334  4445554443 357899999999998 6889


Q ss_pred             EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee
Q 014769          183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF  261 (419)
Q Consensus       183 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  261 (419)
                      +|++ +++||+ .+.+   +++|.++|+++|+++|+|++|.. +.+.+....++.  .   ..+++.|+||++  .|+|.
T Consensus       196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~---~div~~s~~K~l--~Gprg  263 (483)
T 1rv3_A          196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H---CHVVTTTTHKTL--RGCRA  263 (483)
T ss_dssp             EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T---CSEEEEESSGGG--CCCSC
T ss_pred             EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C---CcEEEecCcccC--CCCCc
Confidence            9888 999988 8888   89999999999999999999874 333332222221  1   237889999984  68889


Q ss_pred             EEEEeeCCCCccchh-------hHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          262 GWLVTNDPNGIFQKS-------GIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       262 G~~~~~~~~~~~~~~-------~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      ||++++++.......       ++.+.+....  ...++++.....++..++......++++..+++.++++.+.+.|.+
T Consensus       264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~  343 (483)
T 1rv3_A          264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE  343 (483)
T ss_dssp             EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence            999998631100000       1333343321  1234555555566666666543456788899999999999999998


Q ss_pred             CCCCCCCCCCC-ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cCCCCC-CCCeEEEEee--cC----HHH
Q 014769          333 IPCISCPNKPE-GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PGIYVG-LKNWLRIAFC--AE----PSA  400 (419)
Q Consensus       333 ~~~~~~~~~p~-~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~~~-~~~~~Ris~~--~~----~~~  400 (419)
                      + |+.++ .+. +.+++|+.+....    .+..++. ++|.+.||.+.    ||..+. ..+++||+++  ++    +++
T Consensus       344 ~-g~~~~-~~~~~~~~~~v~~~~~g----~~~~~~~-~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed  416 (483)
T 1rv3_A          344 L-GYKIV-TGGSDNHLILVDLRSKG----TDGGRAE-KVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD  416 (483)
T ss_dssp             T-TCEEG-GGSCSSSEEEEEGGGGT----CCHHHHH-HHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred             c-CCEec-cCCCCCceEEEeccCCC----CCHHHHH-HHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence            8 87744 442 3467788875321    1455554 55578999999    887322 2579999995  35    899


Q ss_pred             HHHHHHHHHHHHHH
Q 014769          401 LKDGLGRMKAFCQR  414 (419)
Q Consensus       401 l~~~l~~l~~~~~~  414 (419)
                      ++++++.|.++++.
T Consensus       417 i~~~~~~l~~~l~~  430 (483)
T 1rv3_A          417 FQKVAHFIHRGIEL  430 (483)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999876

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.97  E-value=6.2e-30  Score=247.20  Aligned_cols=346  Identities=14%  Similarity=0.087  Sum_probs=233.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .|..++||+.|.+.....+. +|.+.+++.+++....   +... .+..++++.+++.+.+..+  .++++|++|+|+++
T Consensus        48 ~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse  121 (449)
T 3a8u_X           48 KGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE  121 (449)
T ss_dssp             TCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred             CCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence            46778999877643322223 7999999999986532   2211 2334566666666665443  46789999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEeeCCCCCCcHH-HHhhcCC------------EEEEEeccCC--CC-cccC-----
Q 014769          119 AVEVILSVLAR--------PGANVLLPRPGWPYYEG-IAQRKQV------------EVRHFDLLPE--RN-WEVD-----  169 (419)
Q Consensus       119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~-~~~~~g~------------~~~~~~~~~~--~~-~~~~-----  169 (419)
                      +++.+++++..        ++|+|++.+|+|+++.. .+...|.            .+..++.+..  .+ .++|     
T Consensus       122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~  201 (449)
T 3a8u_X          122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG  201 (449)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence            99999998764        67999999999997643 3333331            2344443211  11 1245     


Q ss_pred             ---hHHHHHhhcC---CccEEEEeCCC-Ccccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          170 ---LDAVEALADK---NTAAMVIINPG-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       170 ---~~~l~~~~~~---~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                         ++.|+++++.   ....+++++|+ |+||. +.+.+++++|.++|+++|+++|+||+|.++.+.+.. ..+..++..
T Consensus       202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~  280 (449)
T 3a8u_X          202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVT  280 (449)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCC
Confidence               8889888863   23356667774 67997 567999999999999999999999999876554432 122222222


Q ss_pred             CcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh----------hccccCCchHHHHHHHHHHcccchH
Q 014769          242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC----------LSIYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .+++   |+||.++ +| +|+||+++++        ++++.+...          ...+++.+++++.++.++++.... 
T Consensus       281 ~di~---s~sK~l~-~G~~~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-  347 (449)
T 3a8u_X          281 PDLM---CIAKQVT-NGAIPMGAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK-  347 (449)
T ss_dssp             CSEE---EECGGGG-TTSSCCEEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred             CCEE---EEccccc-CCCCceEEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-
Confidence            2333   8899976 47 9999999875        577777653          123456788888888877764221 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCcccccCCC--CHHHHHHHHHHhcCeEeecCCCCCCC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWLLEDIN--DDIEFALKLAKEESVIVTPGIYVGLK  387 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gv~v~~g~~~~~~  387 (419)
                        ++..++++++.+.+.+.|++++.+..+ ..+..|+++|+.++....  ..  +..++...|+ ++||.+.|+.     
T Consensus       348 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~l~-~~Gv~v~~~g-----  417 (449)
T 3a8u_X          348 --ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDG--DAIVRPFEAGMALW-KAGFYVRFGG-----  417 (449)
T ss_dssp             --TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTT--BSSHHHHHHHHHHH-HHTEECEEET-----
T ss_pred             --cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcc--cccccHHHHHHHHH-HCCcEEecCC-----
Confidence              245667777888888888775333311 123456788988864210  00  1235777775 5699999972     


Q ss_pred             CeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          388 NWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       388 ~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +++||++  ..+++++++++++|++++++.
T Consensus       418 ~~iRis~~~~~t~~~i~~~l~~l~~~l~~~  447 (449)
T 3a8u_X          418 DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL  447 (449)
T ss_dssp             TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence            7899996  578999999999999998764

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.97  E-value=3.2e-29  Score=241.03  Aligned_cols=331  Identities=13%  Similarity=0.095  Sum_probs=232.2

Q ss_pred             CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      +|+.+|||..|.+..  .++ .+|.+.+++.+++.....  ..|. .....++++.+++++        +.++|++++|+
T Consensus        74 ~g~~ylD~~sg~~~~--~lgh~~p~v~~Ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sG  142 (439)
T 2oat_A           74 EGRKYFDFLSSYSAV--NQGHCHPKIVNALKSQVDKLTLTSRAFY-NNVLGEYEEYITKLF--------NYHKVLPMNTG  142 (439)
T ss_dssp             TCCEEEESSGGGGTT--TTCBTCHHHHHHHHHHHTTCSCCCTTSE-ESSHHHHHHHHHHHH--------TCSEEEEESSH
T ss_pred             CCCEEEEccCCcccc--cCCCCCHHHHHHHHHHHHhcCcccCccC-CHHHHHHHHHHHHhc--------CCCEEEEeCCH
Confidence            367789999885432  244 789999999999876422  1232 234567777777776        25799999999


Q ss_pred             HHHHHHHHHHhc---------CCC-CeEEeeCCCCCCcHH-HHhhcC------------CEEEEEeccCCCCcccChHHH
Q 014769          117 KQAVEVILSVLA---------RPG-ANVLLPRPGWPYYEG-IAQRKQ------------VEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus       117 ~~al~~~~~~l~---------~~g-d~vlv~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++|++.+++.+.         .+| |.|++.+|+|++... .+...|            .++..++.       .|++.|
T Consensus       143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l  215 (439)
T 2oat_A          143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL  215 (439)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHH
Confidence            999999999875         357 899999999987643 333333            23444442       278999


Q ss_pred             HHhhc-CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769          174 EALAD-KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI  250 (419)
Q Consensus       174 ~~~~~-~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  250 (419)
                      +++++ +++ .+++++| +|++|. .++.+++++|.++|+++|+++|+||+|.++.+.|... .+..++...+++   |+
T Consensus       216 e~~l~~~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~  290 (439)
T 2oat_A          216 ERALQDPNV-AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LL  290 (439)
T ss_dssp             HHHTTSTTE-EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EE
T ss_pred             HHHhCCCCE-EEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Ee
Confidence            99985 444 4555666 567896 5689999999999999999999999998766555322 122222222233   89


Q ss_pred             CCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       251 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      ||.++ +| +|+||+++++        ++++.+... ...+++.+++++.++.++++....   ++..++++++++++.+
T Consensus       291 sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~  358 (439)
T 2oat_A          291 GKALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRN  358 (439)
T ss_dssp             CGGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred             ccccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Confidence            99976 58 9999999975        466555443 233566788888888777765321   2456778888899999


Q ss_pred             HhhcCCCCCCC-CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHH
Q 014769          329 GVKEIPCISCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGL  405 (419)
Q Consensus       329 ~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l  405 (419)
                      .|+++ ++..+ ..+..|.++++.++...  + .+..++...++ ++||.+.|+.    .+++|+++  ..+++++++++
T Consensus       359 ~L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l  429 (439)
T 2oat_A          359 ELMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKVCLRLR-DNGLLAKPTH----GDIIRFAPPLVIKEDELRESI  429 (439)
T ss_dssp             HHTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHHHHHHH-HTTEECCBSS----SSEEEECCCTTCCHHHHHHHH
T ss_pred             HHHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHHHHHHH-HCCeEEecCC----CCEEEEECccCCCHHHHHHHH
Confidence            99886 44321 12345677888886421  0 13567777775 5799998852    57999987  46899999999


Q ss_pred             HHHHHHHHH
Q 014769          406 GRMKAFCQR  414 (419)
Q Consensus       406 ~~l~~~~~~  414 (419)
                      ++|++++++
T Consensus       430 ~~l~~~l~~  438 (439)
T 2oat_A          430 EIINKTILS  438 (439)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            999998864

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.97  E-value=5e-30  Score=247.02  Aligned_cols=327  Identities=17%  Similarity=0.121  Sum_probs=222.6

Q ss_pred             CCeeeccCC-CCCCCCCCCChHHHHHHHHHH---HhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           42 RPVVPLGYG-DPTAFPCFRTAVEAEDAIVDA---VRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        42 ~~~i~l~~g-~~~~~~~~~~~~~v~~a~~~~---~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .++|+|+.| +|    .++.++.+.++....   ........|+ ..|.+ +++++++++.+.+|.    +++++++|++
T Consensus        89 ~~~i~l~~g~~~----~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt  158 (464)
T 1ibj_A           89 TLLVNLDNKFDP----FDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGM  158 (464)
T ss_dssp             HHHTCCCCSSCT----TCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHH
T ss_pred             CeEEECCCCCCC----CCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHH
Confidence            457888887 53    355566666655432   1112234676 35665 777888887776552    4778888889


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC  193 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt  193 (419)
                      +++..++. ++++||+|+++.|+|.++...    ++..|.+++.++++       |++++++++++++++|++++|+|||
T Consensus       159 ~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Npt  230 (464)
T 1ibj_A          159 AALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPR  230 (464)
T ss_dssp             HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTT
T ss_pred             HHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCC
Confidence            99998886 778999999999999987643    56679998888752       7899999998889999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCc
Q 014769          194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGI  272 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~  272 (419)
                      |.+++   +++|.++|+++|+++|+|++|....    ...++. +   +.++++.|+||.++.+ |+|+||++++++   
T Consensus       231 G~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~~---  296 (464)
T 1ibj_A          231 QQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKGE---  296 (464)
T ss_dssp             CCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECSH---
T ss_pred             CEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEEChH---
Confidence            99998   8999999999999999999997522    111221 2   3568999999987654 899999999742   


Q ss_pred             cchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH----------HHhhcCCCCCCCCC
Q 014769          273 FQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICY----------DGVKEIPCISCPNK  341 (419)
Q Consensus       273 ~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~----------~~l~~~~~~~~~~~  341 (419)
                          ++++.++.... ..++.++..+.++...++.. ...+++.........+.+.          +.|+++|++.++ .
T Consensus       297 ----~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~-~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~  370 (464)
T 1ibj_A          297 ----KLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM-ALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH-F  370 (464)
T ss_dssp             ----HHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHH-T
T ss_pred             ----HHHHHHHHHHHhcCCCCCHHHHHHHHhchhhH-HHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHH-h
Confidence                46676765543 34556777888877777642 1222222222222223332          223334444422 3


Q ss_pred             CC---ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC------------CC----------CC-CCeEEEEee
Q 014769          342 PE---GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI------------YV----------GL-KNWLRIAFC  395 (419)
Q Consensus       342 p~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------------~~----------~~-~~~~Ris~~  395 (419)
                      +.   .|.++++.++..     .....+++.| +..||.+.+|.            .+          +. ++++|++++
T Consensus       371 ~~~~g~g~~~~~~l~~~-----~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg  444 (464)
T 1ibj_A          371 SQAKGAGSVFSFITGSV-----ALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG  444 (464)
T ss_dssp             TTCSCCCSEEEEECSCH-----HHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECC
T ss_pred             ccCCCCceEEEEEECCH-----HHHHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeC
Confidence            32   245677777420     0123455554 55789888885            11          22 578999998


Q ss_pred             cCHHHHHHHHHHHHHHHHH
Q 014769          396 AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       396 ~~~~~l~~~l~~l~~~~~~  414 (419)
                      .  |++++++++|++++++
T Consensus       445 ~--edi~~li~~L~~al~~  461 (464)
T 1ibj_A          445 I--EDVDDLISDLDIAFKT  461 (464)
T ss_dssp             S--SCHHHHHHHHHHHHHS
T ss_pred             C--CCHHHHHHHHHHHHhh
Confidence            8  8999999999999865

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.97  E-value=8.3e-30  Score=246.08  Aligned_cols=350  Identities=12%  Similarity=0.043  Sum_probs=223.1

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||..|.+..... ..+|.+.+++.+++....  .|....+..+.+.++++++.+..+  .+.++|++|+|+++
T Consensus        41 ~~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse  115 (448)
T 3dod_A           41 INGKEYYDGFSSVWLNVHG-HRKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAE  115 (448)
T ss_dssp             TTSCEEEETTHHHHTCSSC-BSCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred             CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence            3588899999885432222 247999999999987642  233334555777788888777654  34579999999999


Q ss_pred             HHHHHHHHhcC----CC----CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCccc---------
Q 014769          119 AVEVILSVLAR----PG----ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEV---------  168 (419)
Q Consensus       119 al~~~~~~l~~----~g----d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~---------  168 (419)
                      |++.+++.+..    +|    |+|++++|+|+++.......+..             +..++.  ...+..         
T Consensus       116 A~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  193 (448)
T 3dod_A          116 AMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECR  193 (448)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhh
Confidence            99999999865    44    99999999998765444333221             122222  122221         


Q ss_pred             --ChHHHHHhhc--CCccEEEEeCC-C-Ccccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          169 --DLDAVEALAD--KNTAAMVIINP-G-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       169 --~~~~l~~~~~--~~~~~v~i~~p-~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                        |++.|+++++  .+..++++++| + |++|. +.+.+++++|.++|++||+++|+||+|.++.+.|..+ ....++..
T Consensus       194 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~  272 (448)
T 3dod_A          194 DQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQ  272 (448)
T ss_dssp             HHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCC
Confidence              3788888876  23344455555 5 77774 5688889999999999999999999999876655432 22223322


Q ss_pred             CcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-------hh-ccccCCchHHHHHHHHHHcccc-hHH
Q 014769          242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-------CL-SIYSDIPTFIQGAIPQILEKTK-EDF  311 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~~~a~~~~l~~~~-~~~  311 (419)
                      ..+   .+|||.++ +| +|+||+++++        ++++.+..       .. ..+++.+++++.++.++|+... .+.
T Consensus       273 ~di---~t~sK~l~-~G~~~ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~  340 (448)
T 3dod_A          273 PDL---MAAGKGIT-GGYLPIAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENI  340 (448)
T ss_dssp             CSE---EEECGGGG-TTSSCCEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTH
T ss_pred             CCE---EEeccccc-CCcCceEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccH
Confidence            223   36899975 48 5999999976        67777765       22 3456778888988888887532 223


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC--CC----CHHHHHHHHHHhcCeEeecCCCCC
Q 014769          312 FCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED--IN----DDIEFALKLAKEESVIVTPGIYVG  385 (419)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~--~~----~~~~~~~~ll~~~gv~v~~g~~~~  385 (419)
                      +++.++..+..++.+.+ +..++.+. . .+..|.++|+.++......  ..    ...++...++ ++||.+.|+    
T Consensus       341 ~~~~~~~~~~~~~~l~~-l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----  412 (448)
T 3dod_A          341 VEQVAEKSKKLHFLLQD-LHALPHVG-D-IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL----  412 (448)
T ss_dssp             HHHHHHHHHHHHHHHHH-HTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE----
T ss_pred             HHHHHHHHHHHHHHHHH-HhcCCCeE-E-EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc----
Confidence            34444444444445544 44454332 1 2334667788776421000  00    0256666665 569999987    


Q ss_pred             CCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          386 LKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       386 ~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                       .+++|+++  ..+++++++++++|++++++..+
T Consensus       413 -~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~  445 (448)
T 3dod_A          413 -GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTS  445 (448)
T ss_dssp             -TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence             27899976  57899999999999999987653

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.97  E-value=4.1e-30  Score=241.02  Aligned_cols=299  Identities=13%  Similarity=0.058  Sum_probs=204.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC--eEEeeCCCCCCcH---HHHhhcC
Q 014769           78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYE---GIAQRKQ  152 (419)
Q Consensus        78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd--~vlv~~p~~~~~~---~~~~~~g  152 (419)
                      ..|++..+..+|++++++++      +.  +..++++|+++++..++++++.+||  .|+++.+.|....   ......|
T Consensus        41 ~~y~~~~~~~~l~~~la~~~------~~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g  112 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVL------GM--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP  112 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHH------TC--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred             ccccCChHHHHHHHHHHHHh------CC--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence            46877678899999999998      32  3345557778899999999988888  5666666544322   2345568


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEccccccc--ccCC
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHL--TFGS  229 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~~~  229 (419)
                      ..++.++.   .++.+|+++++++.  +++++++++|+||| |.+++.+++++|+++|+++|+++|+|++|...  .+.+
T Consensus       113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~  187 (357)
T 3lws_A          113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE  187 (357)
T ss_dssp             CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred             cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence            87777653   34579999999873  38899999999998 99999999999999999999999999998721  1112


Q ss_pred             CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-c--cCCchHHHHHHHHHHcc
Q 014769          230 IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-Y--SDIPTFIQGAIPQILEK  306 (419)
Q Consensus       230 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~~~~~~a~~~~l~~  306 (419)
                      .....+.  ... . +++.|+||.++.++  .||+++++        ++++.++..... .  .......+.++...++.
T Consensus       188 ~~~~~~~--~~~-d-~~~~s~sK~~~~~~--gg~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  253 (357)
T 3lws_A          188 KTAAEIA--GLF-D-SIYISFYKGLGGIA--GAILAGPA--------AFCQTARIWKRRYGGDLISLYPYIVSADYYYEL  253 (357)
T ss_dssp             CCHHHHH--TTS-S-EEEEESSSTTCCSS--CEEEEECH--------HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH
T ss_pred             CChHHHH--hcC-C-EEEEeccccCCCCc--eEEEEcCH--------HHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence            2211111  111 1 44789999974443  29988754        577777654321 1  11122233333344432


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          307 TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                          +.++ ..++.++++.+.+.|+++|++.+...|.+++|+|++++....   .+..++. +.+.++||.+.||..|..
T Consensus       254 ----~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~l~~~Gi~v~~g~~~~~  324 (357)
T 3lws_A          254 ----RKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---DISPKLE-QVQEETGLGFVGYLVDKD  324 (357)
T ss_dssp             ----HTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---HHHHHHH-HHHHHHCEESCSCCEECS
T ss_pred             ----HHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---HHHHHHH-HHHHhcCeEEecccccCC
Confidence                2222 334577788899999998888742357778899998864210   0134454 445778999999976652


Q ss_pred             -CCeEEEEee-----cCHHHHHHHHHHHHHHH
Q 014769          387 -KNWLRIAFC-----AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       387 -~~~~Ris~~-----~~~~~l~~~l~~l~~~~  412 (419)
                       ..++|++++     .+++++++++++|.+++
T Consensus       325 ~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          325 GYCSTEISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             SEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             CceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence             238999985     47799999999998764

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.97  E-value=3.1e-30  Score=248.95  Aligned_cols=341  Identities=13%  Similarity=0.063  Sum_probs=229.7

Q ss_pred             CCC--CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           40 DPR--PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        40 ~~~--~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +|+  .+|||..|...... -..+|.+.+++.+++.....   ..|. .....+|++.+++++      +.+.++|++++
T Consensus        71 dG~~~~ylD~~s~~~~~~l-Gh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~~L~e~la~~~------~~~~~~v~~~~  142 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAIH-GHGHPALDQALTTQLRVMNHVMFGGLT-HEPAARLAKLLVDIT------PAGLDTVFFSD  142 (457)
T ss_dssp             TTEEEEEEETTHHHHTCTT-CBTCHHHHHHHHHHHHHCSCCCSSSEE-CHHHHHHHHHHHHHS------STTEEEEEEES
T ss_pred             CCCeeEEEECCCcHhhhcc-CCCCHHHHHHHHHHHHhccCccccccC-CHHHHHHHHHHHHhC------CCCcCEEEEeC
Confidence            577  89999988432211 12589999999998875322   1222 223345555555554      34567999999


Q ss_pred             cHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCCCCcccChHH
Q 014769          115 GCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus       115 g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~  172 (419)
                      |++++++.+++.+..       +| +.|++.+++|+++...+...+.              .+..++.+.......|++.
T Consensus       143 sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~  222 (457)
T 3tfu_A          143 SGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAA  222 (457)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHH
Confidence            999999999998865       55 5899999999987655444421              2233333222111247888


Q ss_pred             HHHhhc---CCccEEEEeC-CCCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769          173 VEALAD---KNTAAMVIIN-PGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL  247 (419)
Q Consensus       173 l~~~~~---~~~~~v~i~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  247 (419)
                      |+++++   ++++++++.. ++||+|.++ +.+++++|.++|+++|+++|+||+|.++.+.|..+ .+..++...+++  
T Consensus       223 le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii--  299 (457)
T 3tfu_A          223 FEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM--  299 (457)
T ss_dssp             HHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE--
T ss_pred             HHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE--
Confidence            888886   4455556555 689999865 88889999999999999999999999876655432 222333333334  


Q ss_pred             ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                       ||||.++...+|+||+++++        ++++.+...      ...+++.+++++.++.++|+....   +...+++++
T Consensus       300 -t~sK~l~gG~~~lG~v~~~~--------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~  367 (457)
T 3tfu_A          300 -CVGKALTGGYLSLAATLCTA--------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITE  367 (457)
T ss_dssp             -EECGGGGTTSSCCEEEEEEH--------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHH
T ss_pred             -EEChhhhCCCcceEEEEEcH--------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHH
Confidence             88998644227999999976        678877521      223567788988888888874221   133455666


Q ss_pred             HHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ec
Q 014769          322 SAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CA  396 (419)
Q Consensus       322 ~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~  396 (419)
                      +.+++++.|+++   +++. . .+..|.++++.++..     .+..++...++ ++||.+.|.     .+++|+++  ..
T Consensus       368 ~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~l~~~-----~~~~~~~~~l~-~~Gv~v~~~-----~~~lRi~p~~~~  434 (457)
T 3tfu_A          368 LAAGLTAGLDTARALPAVT-D-VRVCGAIGVIECDRP-----VDLAVATPAAL-DRGVWLRPF-----RNLVYAMPPYIC  434 (457)
T ss_dssp             HHHHHHHHHGGGGGSTTEE-E-EEECSSCEEEEESSC-----CCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTC
T ss_pred             HHHHHHHHHHHHhcCCCee-e-eecCCeEEEEEECCc-----ccHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCC
Confidence            666667666654   3333 1 233466777877642     24567777775 469999874     36899997  46


Q ss_pred             CHHHHHHHHHHHHHHHHHHh
Q 014769          397 EPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       397 ~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +++++++++++|++++++..
T Consensus       435 t~eei~~~l~~L~~~l~~~~  454 (457)
T 3tfu_A          435 TPAEITQITSAMVEVARLVG  454 (457)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHHHHHHHHhc
Confidence            89999999999999998753

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.97  E-value=5.1e-30  Score=240.51  Aligned_cols=328  Identities=14%  Similarity=0.044  Sum_probs=219.8

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      ...+.++.|..    .++++|.+.+++.+.+.   ...|.+..+..++++++++++      +.  +..++++|+++++.
T Consensus        13 ~~~~~~~~~~~----~~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~------~~--~~~i~~~~g~~a~~   77 (359)
T 3pj0_A           13 TPYKLGGNGPR----NVGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKIL------GK--QSAVFFPSGTMAQQ   77 (359)
T ss_dssp             CSEESSSSSCC----BHHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHH------TC--SEEEEESCHHHHHH
T ss_pred             cchhhcCCCcc----ccCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHh------CC--CcEEEeCCHHHHHH
Confidence            34445555531    23567888888776432   235766678899999999998      32  23355578889999


Q ss_pred             HHHHHhcCCCCe--EEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc-cc
Q 014769          122 VILSVLARPGAN--VLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC-GN  195 (419)
Q Consensus       122 ~~~~~l~~~gd~--vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt-G~  195 (419)
                      .++.+++.+||.  |+++.+.|....   ......|.+++.++.   .++.+|+++++++ .+++++|++++|+||+ |.
T Consensus        78 ~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~  153 (359)
T 3pj0_A           78 IALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQ  153 (359)
T ss_dssp             HHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSB
T ss_pred             HHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCcc
Confidence            999999888887  445545543221   222456888887764   3467999999988 6789999999999998 79


Q ss_pred             CCCHHHHHHHHHHHHhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769          196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF  273 (419)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  273 (419)
                      +++.+++++|+++|+++|+++|+|++|..+..  .+.....+.   .... +++.|+||.++.++ . ||++.++     
T Consensus       154 ~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~-g-g~~~~~~-----  222 (359)
T 3pj0_A          154 LPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIA-G-AILAGND-----  222 (359)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSS-C-EEEEECH-----
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcc-e-EEEECCH-----
Confidence            99999999999999999999999999875432  121111111   1112 45568999876653 2 7777654     


Q ss_pred             chhhHHHHHHhhhc-cccC--CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769          274 QKSGIIDSIKDCLS-IYSD--IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV  350 (419)
Q Consensus       274 ~~~~~~~~l~~~~~-~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  350 (419)
                         ++++.++.... ...+  .....+.++...++.    .. +..+++.++++.+.+.|+++|++.+...|..++++|+
T Consensus       223 ---~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~  294 (359)
T 3pj0_A          223 ---DFVQEAKIWKRRYGGDLISLYPYILSADYYFEK----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHV  294 (359)
T ss_dssp             ---HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEE
T ss_pred             ---HHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEE
Confidence               67777765432 1111  122222233333432    12 3344567888899999999888873235677778888


Q ss_pred             ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-----cCHHHHHHHHHHHHHH
Q 014769          351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-----AEPSALKDGLGRMKAF  411 (419)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-----~~~~~l~~~l~~l~~~  411 (419)
                      .++...   ..+..++. +.+.++||.+.||..|+.  .+++|++++     .+.+++++++++|.+.
T Consensus       295 ~~~~~~---~~~~~~l~-~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          295 YFENSA---DEIGAILT-KIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             EESSCH---HHHHHHHH-HHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             EecCcc---chhHHHHH-HHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence            776311   00234454 445778999999987764  368999985     4689999999999875

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.97  E-value=5.6e-29  Score=234.79  Aligned_cols=324  Identities=13%  Similarity=0.110  Sum_probs=229.7

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++++|+.|.|.      ..+ +.+++.+.+...   .|.+..+..++|+++++++.        .+++++++|+++++
T Consensus         5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~   66 (374)
T 3uwc_A            5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL   66 (374)
T ss_dssp             CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred             cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence            4567899988753      234 888888877653   46666788999999999982        23889999999999


Q ss_pred             HHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          121 EVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ..++.++ .++||+|+++.|+|+++...++..|.+++.++++  .++.+|++.+++++++++++++   |+||||...+ 
T Consensus        67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~-  140 (374)
T 3uwc_A           67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD-  140 (374)
T ss_dssp             HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred             HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence            9999999 8999999999999999999999999999999876  4577899999999987666655   8999999988 


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchh
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                        +++|.++|+++|+++|+|++|+.+. +++...   ..+.    .+++.|+|  |.++.+|. .|+++++++       
T Consensus       141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~---~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~~-------  203 (374)
T 3uwc_A          141 --MPALAKIAKKHNLHIVEDACQTILGRINDKFV---GSWG----QFACFSLHPLKNLNVWSD-AGVIITHSD-------  203 (374)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECSSSSSSCCSSC-CEEEEESCH-------
T ss_pred             --HHHHHHHHHHcCCEEEEeCCCccCceeCCeec---cccc----cEEEEeCCCCCcCCccce-eEEEEeCCH-------
Confidence              8899999999999999999998643 222211   1111    36777866  99765465 888887652       


Q ss_pred             hHHHHHHhhhcc-------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCC
Q 014769          277 GIIDSIKDCLSI-------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC-ISCPNKP  342 (419)
Q Consensus       277 ~~~~~l~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p  342 (419)
                      ++.+.++.....             ....+.....+.  ...   .+.+++..++.+++.+.+.+.|+++++ +.....+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~--~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  278 (374)
T 3uwc_A          204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIA--NRL---MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR  278 (374)
T ss_dssp             HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHH--HHH---GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred             HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHH--HHH---HHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence            455555543210             111122222221  111   133566777788888889999988766 5533233


Q ss_pred             CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----------C------------CCeEEEEee--cC
Q 014769          343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----------L------------KNWLRIAFC--AE  397 (419)
Q Consensus       343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----------~------------~~~~Ris~~--~~  397 (419)
                      .++...|..++...    .+..++...| .++||.+.++....           .            ...+|+++.  .+
T Consensus       279 ~~~~~~~~~~~~~~----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t  353 (374)
T 3uwc_A          279 EGVYHVFHIYVLRV----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLT  353 (374)
T ss_dssp             TTEECCCSSEEEEE----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSC
T ss_pred             CCCceeeEEEEEEc----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCC
Confidence            33333322121110    1456666666 66799998876110           0            168999984  68


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 014769          398 PSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~~~~  415 (419)
                      +++++++++.|++++++.
T Consensus       354 ~edi~~~~~~l~~~l~~~  371 (374)
T 3uwc_A          354 EEEINYIIKKVREFYLEK  371 (374)
T ss_dssp             HHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999998764

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.97  E-value=6.6e-29  Score=237.72  Aligned_cols=337  Identities=12%  Similarity=0.055  Sum_probs=223.3

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC------CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      +.|+|..+.      .+.++.+++++.+.+.+.....|+      ......++++.+.+.+.+.+|  .++++|++++| 
T Consensus        26 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG-   96 (417)
T 3n0l_A           26 EGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG-   96 (417)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-
T ss_pred             cCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-
Confidence            457776553      134789999998877433212232      222334555544444444333  45667888887 


Q ss_pred             HHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcC--CEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCC
Q 014769          117 KQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQ--VEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPG  190 (419)
Q Consensus       117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~  190 (419)
                      ++++..++.+++++||+|+++.|+|.++..   .+...|  ..++.++++  .++.+|++.|+++++ +++++|++++|+
T Consensus        97 t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~  174 (417)
T 3n0l_A           97 SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASA  174 (417)
T ss_dssp             HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSS
T ss_pred             HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCcc
Confidence            799999999999999999999999987543   333333  444555544  566799999999987 578888888888


Q ss_pred             CccccCCCHHHHHHHHHHHHhCCCeEEEccccc-ccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769          191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP  269 (419)
Q Consensus       191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  269 (419)
                      |  |...+   +++|.++|+++|+++|+|++|. +..+.+.....+.     ...+++.|+||.+  +|+|+||++++++
T Consensus       175 ~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~~  242 (417)
T 3n0l_A          175 Y--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTNDE  242 (417)
T ss_dssp             C--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESCH
T ss_pred             c--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECCH
Confidence            6  78888   8999999999999999999964 3334433222221     1238889999984  7888999999741


Q ss_pred             CCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 014769          270 NGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV  347 (419)
Q Consensus       270 ~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~  347 (419)
                             ++.+.++....  ..++++...+.++..++.....+.+++..++++++++.+.+.|++. ++.++..+..+.+
T Consensus       243 -------~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~  314 (417)
T 3n0l_A          243 -------ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHL  314 (417)
T ss_dssp             -------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred             -------HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceE
Confidence                   56777765532  2234455555555555544233566788888999999999999884 7763322345668


Q ss_pred             EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC------CCeEEEEee------cCHHHHHHHHHHHHHHHHHH
Q 014769          348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL------KNWLRIAFC------AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~~Ris~~------~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +|+.++...    .+..++ .++++++||.+.++..+..      ...+|+++.      .++++++++++.|++++++.
T Consensus       315 ~~~~~~~~~----~~~~~~-~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~  389 (417)
T 3n0l_A          315 VLMSFLDRE----FSGKDA-DLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV  389 (417)
T ss_dssp             EEEECTTSS----SCHHHH-HHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcccCC----CCHHHH-HHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence            888775321    134444 4555788999987654322      367999983      36799999999999998653

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.97  E-value=8.9e-30  Score=244.62  Aligned_cols=343  Identities=12%  Similarity=0.042  Sum_probs=227.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+|+.++||+.|.....  ++ .+|.+.+++.+++.......|+ .....+|++++++++      + ++++|++++|++
T Consensus        50 ~~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~~-~~~~~~l~~~la~~~------~-~~~~v~~~~~Gs  119 (429)
T 3k28_A           50 IDGNEYIDYVLSWGPLI--HGHANDRVVEALKAVAERGTSFGAP-TEIENKLAKLVIERV------P-SIEIVRMVNSGT  119 (429)
T ss_dssp             TTCCEEEESCGGGTTCT--TCBSCHHHHHHHHHHHHHCSCCSSC-CHHHHHHHHHHHHHS------T-TCSEEEEESSHH
T ss_pred             CCCCEEEECCCChhhcc--cCCCCHHHHHHHHHHHhhCcCcCCC-CHHHHHHHHHHHHhC------C-CCCEEEEeCChH
Confidence            35888999999865422  33 5899999999998765433344 345667888888776      2 578999999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-CCEEEEEeccCCCCcc------------cChHHHHHhhcC--C
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-QVEVRHFDLLPERNWE------------VDLDAVEALADK--N  180 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~~~~~l~~~~~~--~  180 (419)
                      ++++.+++.+..  +++.|++.+|+|+++...+... |.....+......+..            -|++.++++++.  +
T Consensus       120 ea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  199 (429)
T 3k28_A          120 EATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD  199 (429)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC
Confidence            999999988764  5689999999998765433222 2222211111111110            178888888763  3


Q ss_pred             ccEEEEeCCC-CccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          181 TAAMVIINPG-NPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       181 ~~~v~i~~p~-nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ...+++++|. |++|.+ .+.+++++|.++|++||+++|+||+|.++ ..+... ....++....   +.|+||.++ +|
T Consensus       200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G  273 (429)
T 3k28_A          200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVTPD---LTCLGKVIG-GG  273 (429)
T ss_dssp             GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCCCS---EEEECGGGG-TT
T ss_pred             CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCCCc---eehhhhhhc-CC
Confidence            3455666664 455654 46888999999999999999999999987 544321 1112222222   237899986 59


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc--
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE--  332 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~--  332 (419)
                      +|+||+++++        ++++.+...    ...+++.+++++.++.++++...    ++..++++++++.+.+.|++  
T Consensus       274 ~~iG~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~  341 (429)
T 3k28_A          274 LPVGAYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAA  341 (429)
T ss_dssp             SCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcH--------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999865        566666542    22356778999999988888643    45556666666666666654  


Q ss_pred             --CCCCCCCCCCCceEEEEeecCcccc--------cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHH
Q 014769          333 --IPCISCPNKPEGSMVTMVKLNPWLL--------EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALK  402 (419)
Q Consensus       333 --~~~~~~~~~p~~g~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~  402 (419)
                        .+.+. . .+..|.++++.+.....        .......++...+ .++||.+.|+.    .+.+|+++..++++++
T Consensus       342 ~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~r~~~~~t~e~i~  414 (429)
T 3k28_A          342 EKHGIPH-H-INRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ----FEGLFLSTVHSDADIE  414 (429)
T ss_dssp             HHTTCCC-E-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST----TSCBCCCTTCCHHHHH
T ss_pred             hhCCCCE-E-EEeeccEEEEEEecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC----CCCEEEECCCCHHHHH
Confidence              33332 2 23445566666642110        0000124566666 56799999874    3567998888999999


Q ss_pred             HHHHHHHHHHHHHh
Q 014769          403 DGLGRMKAFCQRHT  416 (419)
Q Consensus       403 ~~l~~l~~~~~~~~  416 (419)
                      +++++|++++++++
T Consensus       415 ~~l~~l~~~l~~~~  428 (429)
T 3k28_A          415 ATIAAAEIAMSKLK  428 (429)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998753

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.97  E-value=2.6e-29  Score=243.77  Aligned_cols=350  Identities=13%  Similarity=0.085  Sum_probs=234.4

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..|...... -..+|.+.+++.+++.....  |....+..+.+.++++++.+..+  .+.++|++++|+++
T Consensus        51 ~~G~~ylD~~s~~~~~~l-Gh~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse  125 (476)
T 3i5t_A           51 EDGRRLIDGPAGMWCAQV-GYGRREIVDAMAHQAMVLPY--ASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGST  125 (476)
T ss_dssp             TTCCEEEETTHHHHTCTT-CBCCHHHHHHHHHHHHHCCC--CCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHH
T ss_pred             CCCCEEEECCCchhhccC-CCCCHHHHHHHHHHHHhccC--cccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHH
Confidence            358889999988433211 12579999999999876322  22224566888899999887654  34579999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCC-cccC-------
Q 014769          119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERN-WEVD-------  169 (419)
Q Consensus       119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~-~~~~-------  169 (419)
                      |++.+++.++.        .++.|++.+|+|+++...+...+..             +..++...... +..+       
T Consensus       126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  205 (476)
T 3i5t_A          126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDD  205 (476)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHH
Confidence            99999999863        3579999999999876555443321             22222111000 1112       


Q ss_pred             -hHHHHHhhc----CCccEEEEeCCCCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc-ccCCCC
Q 014769          170 -LDAVEALAD----KNTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-LFGSIV  242 (419)
Q Consensus       170 -~~~l~~~~~----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~  242 (419)
                       +++|++.+.    +++.++++..++|++|. +.+.+++++|.++|+++|+++|+||+|.++.+.|..+ .+. .++..+
T Consensus       206 ~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~p  284 (476)
T 3i5t_A          206 LVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVVP  284 (476)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCCc
Confidence             677887775    23344555555777885 7899999999999999999999999999887666432 222 233222


Q ss_pred             cEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccchHHHH
Q 014769          243 PVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      +++   ++||.++ .| +|+|++++++        ++++.+...        ...+++.+++++.++.++|+....   +
T Consensus       285 di~---t~sK~l~-~G~~plg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~  349 (476)
T 3i5t_A          285 DII---TFAKGVT-SGYVPLGGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---E  349 (476)
T ss_dssp             SEE---EECGGGG-TTSSCCEEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---T
T ss_pred             chh---hhhhhhc-CCCcCeEEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---H
Confidence            333   6789976 48 9999999965        677777642        224567889999998888875321   2


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCC------CHHHHHHHHHHhcCeEeecCCCC
Q 014769          314 KLIDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDIN------DDIEFALKLAKEESVIVTPGIYV  384 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gv~v~~g~~~  384 (419)
                      +..++++++.+++++.|+++   |.+. . .+..|.++++.+.........      ....+...+ .++||.+.|..  
T Consensus       350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~-~-v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g--  424 (476)
T 3i5t_A          350 GIVDQAREMADYFAAALASLRDLPGVA-E-TRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERC-FELGLIVRPLG--  424 (476)
T ss_dssp             THHHHHHHHHHHHHHHHHTTTTSTTEE-E-EEEETTEEEEEECCC-----CCHHHHHHHHHHHHHH-HHTTEECEEET--
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeE-E-EEecCceeEEEEecCccccccccchhHHHHHHHHHH-HHCCCEEEecC--
Confidence            34556666677777776654   3232 1 223355666666532100000      134555666 45699999842  


Q ss_pred             CCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          385 GLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       385 ~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                         +++||++  ..+++++++++++|++++++..+
T Consensus       425 ---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~  456 (476)
T 3i5t_A          425 ---DLCVISPPLIISRAQIDEMVAIMRQAITEVSA  456 (476)
T ss_dssp             ---TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence               7999995  57999999999999999987754

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.97  E-value=8.2e-29  Score=235.55  Aligned_cols=286  Identities=17%  Similarity=0.111  Sum_probs=201.7

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh----hcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~  160 (419)
                      ...+|++.++++.    |    .+++++++|+++++..++.+++++||+|+++.|+|.++...+.    ..|.+++.++.
T Consensus        82 ~~~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~  153 (414)
T 3ndn_A           82 TVSVFEERLRLIE----G----APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG  153 (414)
T ss_dssp             HHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence            3456666666665    2    3678999999999999999999999999999999998766554    48999988875


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      +       |++++++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|....+.    .++ .++ 
T Consensus       154 ~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g-  217 (414)
T 3ndn_A          154 D-------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLG-  217 (414)
T ss_dssp             T-------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGT-
T ss_pred             C-------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcC-
Confidence            2       789999999989999999999999999988   889999999999999999999854322    111 222 


Q ss_pred             CCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHH-HHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIID-SIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                        ..+++.|+||.++.+| +++|++++++        +.+. .++... ......++...+++...++     .+....+
T Consensus       218 --~div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~r~~  282 (414)
T 3ndn_A          218 --VDVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE-----TLAIRVQ  282 (414)
T ss_dssp             --CSEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG-----GHHHHHH
T ss_pred             --CCeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH-----HHHHHHH
Confidence              2388899999998888 8999999865        3333 444332 2233445444444433333     3555666


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  381 (419)
                      +..++++.+.+.|++.|++..+..|.                .|.++++.++............+++.+ +..++.++.|
T Consensus       283 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G  361 (414)
T 3ndn_A          283 HSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLG  361 (414)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCS
T ss_pred             HHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCC
Confidence            77788888999998877654333332                467888888631000001234555554 5567777777


Q ss_pred             CCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          382 IYVG-----------------------LKNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       382 ~~~~-----------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      ..+.                       .++++|||++.  |+.+++++.|++++
T Consensus       362 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al  413 (414)
T 3ndn_A          362 DAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL  413 (414)
T ss_dssp             CSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred             CCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence            6542                       15789999986  34555666666554

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.97  E-value=1.1e-28  Score=239.52  Aligned_cols=333  Identities=16%  Similarity=0.095  Sum_probs=237.8

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC---CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .++.|+ |..   +  ...|.+.+++.+...  .++.|.+   .+|..++++.+++++.+..|...   .+++++|++++
T Consensus        67 ~~~~lg-~~~---~--~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a  135 (474)
T 1wyu_B           67 TFYPLG-SCT---M--KYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHG  135 (474)
T ss_dssp             SCCCBT-TTC---C--CCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHH
T ss_pred             Cccccc-ccc---c--cCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHH
Confidence            467777 421   1  234556666655421  1234443   56777888888888888777542   46788999999


Q ss_pred             HHHHHHHh----cCCCC-----eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCC
Q 014769          120 VEVILSVL----ARPGA-----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG  190 (419)
Q Consensus       120 l~~~~~~l----~~~gd-----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~  190 (419)
                      +..++.++    .++||     +|+++.|+|+.+...+...|.+++.++++  .++.+|+++|++++++++++|++++| 
T Consensus       136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~~t~~v~~~~p-  212 (474)
T 1wyu_B          136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNP-  212 (474)
T ss_dssp             HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred             HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCCCceEEEEECC-
Confidence            99866554    35787     99999999999999999999999999875  35679999999999888899999998 


Q ss_pred             CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC-C---ceeEEEEe
Q 014769          191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-G---WRFGWLVT  266 (419)
Q Consensus       191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G---~r~G~~~~  266 (419)
                      ||||.+.  +++++|.++|+++|+++|+|++|..+.++.   .....++   ..+++.|+||+++.| |   +|+||+++
T Consensus       213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~g---~di~~~s~~K~~~~p~g~gG~~~G~~~~  284 (474)
T 1wyu_B          213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDMG---FDVVHLNLHKTFTVPHGGGGPGSGPVGV  284 (474)
T ss_dssp             CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHHT---CSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred             CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC---CCcccCC---CcEEEEeCccccccCCCCCCCCeEEEEE
Confidence            6899883  239999999999999999999998765421   1222232   348888999998766 4   69999999


Q ss_pred             eCCCCccchhhHHHHHHh-h-------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Q 014769          267 NDPNGIFQKSGIIDSIKD-C-------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEIC  326 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~-~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  326 (419)
                      ++        ++++.+.. .                   ....++.+..++.++..++.....+++++..+++.++++++
T Consensus       285 ~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l  356 (474)
T 1wyu_B          285 KA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYL  356 (474)
T ss_dssp             CG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            76        23333321 0                   00112356667777777776433567888889999999999


Q ss_pred             HHHhhcCCCCCCCCCCCceE-EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeec--CHHHH
Q 014769          327 YDGVKEIPCISCPNKPEGSM-VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCA--EPSAL  401 (419)
Q Consensus       327 ~~~l~~~~~~~~~~~p~~g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~--~~~~l  401 (419)
                      .+.|+++ ++.+. .+...+ .+++.++.     ..+..++..+|++ +||.+ |+..|.  ..+++||+++.  +++++
T Consensus       357 ~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~i  427 (474)
T 1wyu_B          357 KELLKEK-GYRVP-YDGPSMHEFVAQPPE-----GFRALDLAKGLLE-LGFHP-PTVYFPLIVKEALMVEPTETEAKETL  427 (474)
T ss_dssp             HHHHHHT-TCBCS-SCSSCCSCEEEBCST-----TCCHHHHHHHHHH-TTCCC-CEESCSTTSTTCEEECCCTTSCHHHH
T ss_pred             HHHHhhc-CcEec-CCCCcceEEEEEcCC-----CCCHHHHHHHHHH-CCccc-cccccccccCCEEEEEeecCCCHHHH
Confidence            9999987 77732 232222 15556631     1256788888755 59985 666554  36899999964  89999


Q ss_pred             HHHHHHHHHHHHH
Q 014769          402 KDGLGRMKAFCQR  414 (419)
Q Consensus       402 ~~~l~~l~~~~~~  414 (419)
                      ++++++|++++++
T Consensus       428 d~~~~~L~~~~~~  440 (474)
T 1wyu_B          428 EAFAEAMGALLKK  440 (474)
T ss_dssp             HHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988753

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.97  E-value=4.7e-29  Score=241.26  Aligned_cols=335  Identities=13%  Similarity=0.080  Sum_probs=216.2

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +++.+|||+.|.+.....+ .+|.+.+++.+++....  .|+   +..++++++++++.+..+   ++++|++++|+++|
T Consensus        55 ~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA  125 (453)
T 2cy8_A           55 DGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTET  125 (453)
T ss_dssp             TCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHH
T ss_pred             CCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHH
Confidence            4677899999965432222 67999999999987643  232   356899999999988764   57899999999999


Q ss_pred             HHHHHHH---hcCCCCeEEeeCCCCCCcHHHHhh-----------cCCE------EEEEeccCCCCcccChHHHHHhhcC
Q 014769          120 VEVILSV---LARPGANVLLPRPGWPYYEGIAQR-----------KQVE------VRHFDLLPERNWEVDLDAVEALADK  179 (419)
Q Consensus       120 l~~~~~~---l~~~gd~vlv~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~~~~~l~~~~~~  179 (419)
                      +..++++   +.+ ++.|++.+|+|+++...+..           .|..      +..++.       .|++.|++++++
T Consensus       126 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~  197 (453)
T 2cy8_A          126 TLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFAN  197 (453)
T ss_dssp             HHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHh
Confidence            9999998   654 47888999999876443221           1221      112211       378899888863


Q ss_pred             --CccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769          180 --NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL  255 (419)
Q Consensus       180 --~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  255 (419)
                        ....+++++| +||||.+ .+.+++++|.++|++||+++|+||+|+++ +.+.. ..+..++...++   .|+||.++
T Consensus       198 ~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK~l~  272 (453)
T 2cy8_A          198 HGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-GMQALLDVQPDL---TCLAKASA  272 (453)
T ss_dssp             HGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-HHHHHHTCCCSE---EEEEGGGG
T ss_pred             cCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-hhhHHhCCCCcE---EEEChhhh
Confidence              2334566666 4779976 47999999999999999999999999977 44321 112122222222   38999976


Q ss_pred             CCCceeEEEEeeCCCCccchhhHHHHHHh------hhccccCCchHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHHHH
Q 014769          256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKD------CLSIYSDIPTFIQGAIPQILEK-TKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      . |+|+||+++++        ++++.+..      ....+++.+++++.++.++|+. . .   ++..++++++++.+.+
T Consensus       273 ~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~  339 (453)
T 2cy8_A          273 G-GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFARE  339 (453)
T ss_dssp             T-TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHH
T ss_pred             C-CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHH
Confidence            4 89999999875        45555544      1122456788888888777764 3 1   2334555666666666


Q ss_pred             HhhcCC---CCCCCCCCCceEEEEeecCc-----c----ccc-----CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEE
Q 014769          329 GVKEIP---CISCPNKPEGSMVTMVKLNP-----W----LLE-----DINDDIEFALKLAKEESVIVTPGIYVGLKNWLR  391 (419)
Q Consensus       329 ~l~~~~---~~~~~~~p~~g~~~~~~~~~-----~----~~~-----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~R  391 (419)
                      .|+++.   ++... .+..|.++|+.++.     .    ...     ...+..++...++ ++||.+.|+      +.+|
T Consensus       340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~  411 (453)
T 2cy8_A          340 AMNHLFARKGLNWL-AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVF  411 (453)
T ss_dssp             HHHHHHHHTTCCEE-EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEE
T ss_pred             HHHHHHhhCCCcEE-EEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEE
Confidence            665420   23212 34456688888863     1    000     0001356777775 579999653      2477


Q ss_pred             EEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769          392 IAFCAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       392 is~~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      +++..+++++++++++|+++++++.+
T Consensus       412 l~~~~t~~~i~~~l~~l~~~l~~~~~  437 (453)
T 2cy8_A          412 LSAQHEREHVEHLVTTFDRVLDRLAD  437 (453)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeccCCHHHHHHHHHHHHHHHHHHHh
Confidence            77678999999999999999987643

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.97  E-value=6.3e-29  Score=240.69  Aligned_cols=350  Identities=13%  Similarity=0.073  Sum_probs=229.6

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..|..... .-..+|.+.+++.+++..... .|....+..+.+..+++.+.+..+  .+.++|++++|+++
T Consensus        52 ~~G~~ylD~~s~~~~~~-lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGse  127 (472)
T 3hmu_A           52 SEGEEILDAMAGLWCVN-IGYGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSE  127 (472)
T ss_dssp             TTCCEEECTTHHHHTCT-TCBCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred             CCCCEEEECCCchhhcc-CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHH
Confidence            35888999998843211 122579999999999876431 233222334566666666665443  35679999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCC------------EEEEEeccC--C-CCcccC------
Q 014769          119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV------------EVRHFDLLP--E-RNWEVD------  169 (419)
Q Consensus       119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~~------  169 (419)
                      +++.+++.++.        +++.|++.+|+|+++...+...+.            .+..++.+.  . +++ .+      
T Consensus       128 A~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~  206 (472)
T 3hmu_A          128 ANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGL  206 (472)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHH
Confidence            99999999875        468999999999987655544432            233444211  0 111 23      


Q ss_pred             --hHHHHHhhcC---CccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCC
Q 014769          170 --LDAVEALADK---NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV  242 (419)
Q Consensus       170 --~~~l~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  242 (419)
                        ++.|++.++.   +..++++++| +|++|.+ .+.+++++|.++|+++|+++|+||+|.++...|..+ ....++..+
T Consensus       207 ~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~p  285 (472)
T 3hmu_A          207 ARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIRP  285 (472)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCCC
Confidence              6777777752   3345566655 6677765 489999999999999999999999999876665422 222233322


Q ss_pred             cEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769          243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL  319 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  319 (419)
                      +++   +|||.++..|+|+||+++++        ++++.+...   ...+++.+++++.++.++|+....   +...+++
T Consensus       286 di~---t~sK~l~gg~~plG~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~  351 (472)
T 3hmu_A          286 HIM---TIAKGLSSGYAPIGGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHV  351 (472)
T ss_dssp             SEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHH
T ss_pred             cee---eechhhhcCCcceEEEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHH
Confidence            333   68899776669999999976        688888321   223567889999988888875321   2334445


Q ss_pred             H-HHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCccccc--CC-----CCHHHHHHHHHHhcCeEeecCCCCCCCC
Q 014769          320 R-ESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLLE--DI-----NDDIEFALKLAKEESVIVTPGIYVGLKN  388 (419)
Q Consensus       320 ~-~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~~--~~-----~~~~~~~~~ll~~~gv~v~~g~~~~~~~  388 (419)
                      + ++.+++++.|++   +|.+. . .+..|.++++.+......  ..     ....++...+ .++||.+.|+.     +
T Consensus       352 ~~~~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~  423 (472)
T 3hmu_A          352 RNVAAPYLKEKWEALTDHPLVG-E-AKIVGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG-----D  423 (472)
T ss_dssp             HHTHHHHHHHHHHGGGGSTTEE-E-EEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET-----T
T ss_pred             HHHHHHHHHHHHHHHhcCCCeE-E-EEecCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC-----C
Confidence            5 555555555544   34333 2 223355666666431100  00     0134566666 45799999863     7


Q ss_pred             eEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769          389 WLRIAF--CAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       389 ~~Ris~--~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++||++  ..+++++++++++|++++++..
T Consensus       424 ~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~  453 (472)
T 3hmu_A          424 RMIISPPLVITPAEIDEMFVRIRKSLDEAQ  453 (472)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999996  5799999999999999998764

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.97  E-value=7.7e-28  Score=232.58  Aligned_cols=368  Identities=13%  Similarity=-0.025  Sum_probs=248.1

Q ss_pred             chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhC
Q 014769           22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL  101 (419)
Q Consensus        22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~  101 (419)
                      ..+..++++.+.+.+.. ++....++..+.+     .+.++.+.+++.+++.... ..|....+..++++.+.+++.+.+
T Consensus        22 g~~~~~v~~~~~~~~~~-~~~~~~~~~~f~~-----~~~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~   94 (452)
T 2dgk_A           22 EMRDDVAFQIINDELYL-DGNARQNLATFCQ-----TWDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLW   94 (452)
T ss_dssp             CCCHHHHHHHHHHHGGG-SCCCTTBCSCCSC-----CCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHhcC-CCCCccCCCCeeC-----CCchHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHh
Confidence            33455555555444322 2333333333322     2456788888888775432 245555677888999999988888


Q ss_pred             CCCCCC---CcEEEcccHHHHHHHHHHHhcC--------CC-----CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769          102 PYKLSA---DDVYVTLGCKQAVEVILSVLAR--------PG-----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN  165 (419)
Q Consensus       102 ~~~~~~---~~i~~t~g~~~al~~~~~~l~~--------~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  165 (419)
                      |.+.+.   ..+++|+|+++++..++.+++.        +|     +.|++++ +|..+...+...|++++.+++++ ++
T Consensus        95 g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~  172 (452)
T 2dgk_A           95 HAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQ  172 (452)
T ss_dssp             TCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TB
T ss_pred             CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CC
Confidence            865332   2499999999999999988754        55     5899999 99999999999999999998764 35


Q ss_pred             cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC------CCeEEEccccccccc---CCCCCCCcc
Q 014769          166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL------RVMVVADEVYGHLTF---GSIPYTPMG  236 (419)
Q Consensus       166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~  236 (419)
                      +.+|+++|++++++++++|++++|+||||.+.+   +++|.++|+++      ++++++|++|+.+..   .+.....+ 
T Consensus       173 ~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-  248 (452)
T 2dgk_A          173 LFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF-  248 (452)
T ss_dssp             CSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-
T ss_pred             CeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc-
Confidence            789999999999988999999999999999988   88899999995      999999999998643   22211111 


Q ss_pred             ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc----------cccCC---chHHHHHHHHH
Q 014769          237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS----------IYSDI---PTFIQGAIPQI  303 (419)
Q Consensus       237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~~---~~~~~~a~~~~  303 (419)
                        ....-.+++.|++|. ++.|+++||++++++..+      .+.+.....          ..++.   ....+.++...
T Consensus       249 --~~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~  319 (452)
T 2dgk_A          249 --RLPRVKSISASGHKF-GLAPLGCGWVIWRDEEAL------PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLR  319 (452)
T ss_dssp             --TSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGS------CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHH
T ss_pred             --CCCCCcEEEECcccc-cCCCCCeEEEEEcCHHHH------HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHH
Confidence              111223566788995 788999999999753211      111111000          01111   23344444444


Q ss_pred             HcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769          304 LEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT  379 (419)
Q Consensus       304 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  379 (419)
                      +.   .+.+++..++..++++++.+.|+++++++++ .|    ....++.++++.... ...+..++...| .++||.+.
T Consensus       320 lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~~~~v~f~~~~~~~-~~~~~~~l~~~L-~~~Gi~v~  393 (452)
T 2dgk_A          320 LG---REGYTKVQNASYQVAAYLADEIAKLGPYEFI-CTGRPDEGIPAVCFKLKDGED-PGYTLYDLSERL-RLRGWQVP  393 (452)
T ss_dssp             HH---HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-EECCTTTBSSEEEEEECTTCC-CSCCHHHHHHHH-HHTTCBCC
T ss_pred             Hh---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCCCCCCCeEEEEEEecCccc-ccCCHHHHHHHH-HhcCCeee
Confidence            42   3668888899999999999999998777744 33    233455566653100 001236777776 55799654


Q ss_pred             cCCCC---CCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          380 PGIYV---GLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       380 ~g~~~---~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .....   ....++|++++  .++++++.+++.|+++++++.+
T Consensus       394 ~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~  436 (452)
T 2dgk_A          394 AFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD  436 (452)
T ss_dssp             EEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            32111   12458999995  4689999999999999877643

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.96  E-value=5.2e-29  Score=239.67  Aligned_cols=337  Identities=12%  Similarity=0.065  Sum_probs=221.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|+.+|||+.|.+...... .+|.+.+++.+++.......|.     .++++.+++.+.+..+   ++++|++++|++++
T Consensus        54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~---~~~~v~~~~sgseA  124 (434)
T 2epj_A           54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAP-----GEAEVLLAEKILGYVK---RGGMIRFVNSGTEA  124 (434)
T ss_dssp             TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSC-----CHHHHHHHHHHHHHHC---TTCEEEEESSHHHH
T ss_pred             CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            4778999999865432222 6899999999998774332332     2344444444444332   56899999999999


Q ss_pred             HHHHHHH---hcCCCCeEEeeCCCCCCcHHHHh-h-------------cCC------EEEEEeccCCCCcccChHHHHHh
Q 014769          120 VEVILSV---LARPGANVLLPRPGWPYYEGIAQ-R-------------KQV------EVRHFDLLPERNWEVDLDAVEAL  176 (419)
Q Consensus       120 l~~~~~~---l~~~gd~vlv~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~~~~~l~~~  176 (419)
                      +..+++.   +. +++.|++.+|+|+++...+. .             .|+      .+..++.       .|++.|+++
T Consensus       125 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  196 (434)
T 2epj_A          125 TMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV  196 (434)
T ss_dssp             HHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence            9999987   44 45789999999987544221 1             122      1333332       278899888


Q ss_pred             hcC--CccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          177 ADK--NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       177 ~~~--~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      +++  +...+++++| +|+||.+. +.+++++|.++|+++|+++|+||+|+++ ..+.. .....++...++   .||||
T Consensus       197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK  271 (434)
T 2epj_A          197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGDI---IVLGK  271 (434)
T ss_dssp             HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCSE---EEEEG
T ss_pred             HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCCe---eeecc
Confidence            863  2345566666 56799866 7999999999999999999999999976 33321 111122222222   38899


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      .++. |+|+||+++++        ++++.+...    ...+++.+++++.++.++|+....   ++..++++++++++.+
T Consensus       272 ~l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~  339 (434)
T 2epj_A          272 IIGG-GFPVGAVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEE  339 (434)
T ss_dssp             GGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHH
T ss_pred             hhcC-CcceeeeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence            9876 99999999865        466655541    122456788888888777764221   2345566666666666


Q ss_pred             HhhcC---CCCCCCCCCCceEEEEeecCcccccC--------CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC
Q 014769          329 GVKEI---PCISCPNKPEGSMVTMVKLNPWLLED--------INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE  397 (419)
Q Consensus       329 ~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~  397 (419)
                      .|+++   .++... .+..|.++|+.++......        ..+..++...|+ ++||.+.|+..    ..+|+++..+
T Consensus       340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t  413 (434)
T 2epj_A          340 AASEVLDRTGLPYT-INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSNL----EAVFTGLPHQ  413 (434)
T ss_dssp             HHHHHHHHHTCCEE-EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCS
T ss_pred             HHHHHHhhCCCcEE-EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccCC----CcEEEeccCC
Confidence            66553   123211 2345668888886410000        002345666664 67999999752    3577777789


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 014769          398 PSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++++++++++|+++++++.
T Consensus       414 ~e~i~~~l~~l~~~l~~~~  432 (434)
T 2epj_A          414 GEALEIAVEGLRSSLKTVL  432 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998753

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.96  E-value=1.6e-28  Score=235.60  Aligned_cols=333  Identities=13%  Similarity=0.057  Sum_probs=222.4

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|..+|||+.|.+.....+ .+|.+.+++.+++..+....|     ..++++.+++.+.+..+   ++++|++++|++++
T Consensus        50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea  120 (424)
T 2e7u_A           50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP---FVDLVRFVNSGTEA  120 (424)
T ss_dssp             TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred             CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            4778999998865432223 689999999999876432223     23566666666666543   57899999999999


Q ss_pred             HHHHHHH---hcCCCCeEEeeCCCCCCcHHHHhh--------------cCC------EEEEEeccCCCCcccChHHHHHh
Q 014769          120 VEVILSV---LARPGANVLLPRPGWPYYEGIAQR--------------KQV------EVRHFDLLPERNWEVDLDAVEAL  176 (419)
Q Consensus       120 l~~~~~~---l~~~gd~vlv~~p~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~~~~~l~~~  176 (419)
                      +..+++.   +. +++.|++.+|+|+++...+..              .|+      .+..++.       .|++.|++.
T Consensus       121 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  192 (424)
T 2e7u_A          121 TMSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV  192 (424)
T ss_dssp             HHHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence            9999986   44 458899999999986543221              121      1223321       378889888


Q ss_pred             hcC--CccEEEEeCCCCc-cccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          177 ADK--NTAAMVIINPGNP-CGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       177 ~~~--~~~~v~i~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      ++.  +...+++++|+|+ ||.+. +.+++++|.++ ++||+++|+||+|+++ ..+... ....++...++   .||||
T Consensus       193 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~-~~~~~~~~~di---~s~sK  266 (424)
T 2e7u_A          193 LKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGG-ATELLGLKPDL---VTLGK  266 (424)
T ss_dssp             HHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTH-HHHHHTCCCSE---EEECG
T ss_pred             HHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhH-HHHHhCCCcch---hhhhh
Confidence            763  3456777788665 89765 79999999999 9999999999999987 333211 11122222222   28999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD  328 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  328 (419)
                      .++ +|+|+||+++++        ++++.+...    ...+++.+++++.++.++++....  .++..++++++++.+.+
T Consensus       267 ~l~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~  335 (424)
T 2e7u_A          267 ILG-GGLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEA  335 (424)
T ss_dssp             GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHH
T ss_pred             hhh-CCcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Confidence            987 599999999875        566666541    122456788888888888764221  13456666777777777


Q ss_pred             HhhcC---CCCCCCCCCCceEEEEeecCcccccC--------CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC
Q 014769          329 GVKEI---PCISCPNKPEGSMVTMVKLNPWLLED--------INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE  397 (419)
Q Consensus       329 ~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~  397 (419)
                      .|+++   .++... .+..|.++|+.++......        ..+..++...++ ++||.+.|+..    ..+|+++..+
T Consensus       336 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t  409 (424)
T 2e7u_A          336 GLKEVLKEKGLPHT-VNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNF----EAAFLSVAHR  409 (424)
T ss_dssp             HHHHHHHHTTCCCE-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSS----SCEECCTTCC
T ss_pred             HHHHHHHhCCCceE-EEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCC----CceEeeccCC
Confidence            76653   133212 2445668898886410000        001346666665 68999999753    3477777789


Q ss_pred             HHHHHHHHHHHHHHH
Q 014769          398 PSALKDGLGRMKAFC  412 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~  412 (419)
                      ++++++++++|++++
T Consensus       410 ~~~i~~~l~~l~~~l  424 (424)
T 2e7u_A          410 EEDVEKTLEALRKAL  424 (424)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999998763

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.96  E-value=1.4e-28  Score=236.21  Aligned_cols=339  Identities=13%  Similarity=0.037  Sum_probs=216.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.++||+.|.+.... -..+|.+.+++.+++.......|     ..+.+..+++++.+..+   ++++|++++|+++
T Consensus        49 ~~g~~~lD~~~~~~~~~l-G~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~ggse  119 (427)
T 3fq8_A           49 VDGNRYIDYVGTWGPAIC-GHAHPEVIEALKVAMEKGTSFGA-----PCALENVLAEMVNDAVP---SIEMVRFVNSGTE  119 (427)
T ss_dssp             TTSCEEEESSGGGTTCTT-CBTCHHHHHHHHHHHTTCSCCSS-----CCHHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred             CCCCEEEECCCchhhhcc-CCCCHHHHHHHHHHHHhCCCcCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHH
Confidence            357889999999654221 12589999999999876533223     23566666666666554   5789999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhc-CCE-------------------EEEEeccCCCCcccChHHHHHh
Q 014769          119 AVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRK-QVE-------------------VRHFDLLPERNWEVDLDAVEAL  176 (419)
Q Consensus       119 al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g~~-------------------~~~~~~~~~~~~~~~~~~l~~~  176 (419)
                      +++.+++...  ..++.|++.+|+|+++...+... +..                   +..++.       -|+++|+++
T Consensus       120 a~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~  192 (427)
T 3fq8_A          120 ACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKAL  192 (427)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHH
Confidence            9999995442  24589999999998754433222 111                   122221       178899888


Q ss_pred             hcC---CccEEEEeCCCCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          177 ADK---NTAAMVIINPGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       177 ~~~---~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      +++   +++++++..++|++|.+. +.+++++|.++|++||+++|+||+|.++ ..+... ....++....   +.|+||
T Consensus       193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK  267 (427)
T 3fq8_A          193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVTPD---LTTLGK  267 (427)
T ss_dssp             HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCCCS---EEEECG
T ss_pred             HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCCCC---hhhhhh
Confidence            865   344444444466777665 4677999999999999999999999987 444321 1112222222   348899


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHH
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICY  327 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~  327 (419)
                      .++ +|+|+||+++++        ++++.+...    ...+++.+++++.++.++++... ++..++..+.....++.+.
T Consensus       268 ~~~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~  338 (427)
T 3fq8_A          268 IIG-GGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLL  338 (427)
T ss_dssp             GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHH
T ss_pred             hhh-CCcceEEEEEcH--------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            987 799999998865        566666542    22345668888888888886432 2233333333333333333


Q ss_pred             HHhhcCCCCCCCCCCCceEEEEeecCccccc-----CCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHH
Q 014769          328 DGVKEIPCISCPNKPEGSMVTMVKLNPWLLE-----DIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPS  399 (419)
Q Consensus       328 ~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~-----~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~  399 (419)
                      +.+..+ ++. ...+..|+++++.++.....     ...+   ..++...+ .++||.+.|+..    ..+|+++..+++
T Consensus       339 ~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gi~v~~~~~----~r~~~~~~~t~e  411 (427)
T 3fq8_A          339 AIAQET-GHA-ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAHTEE  411 (427)
T ss_dssp             HHHHHT-TCC-CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHH
T ss_pred             HHHHhC-CCC-eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHH-HHCCcEEecCCC----CCEEeeCcCCHH
Confidence            333333 222 11344577888887542110     0001   24566666 567999998763    345666677999


Q ss_pred             HHHHHHHHHHHHHHH
Q 014769          400 ALKDGLGRMKAFCQR  414 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~  414 (419)
                      ++++++++|++++++
T Consensus       412 ~i~~~l~~l~~~l~~  426 (427)
T 3fq8_A          412 DIDATLAAARTVMSA  426 (427)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999875

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.96  E-value=1e-27  Score=226.21  Aligned_cols=313  Identities=11%  Similarity=0.081  Sum_probs=224.7

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh---cCCCCeEE
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL---ARPGANVL  135 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l---~~~gd~vl  135 (419)
                      ++++.+.+++.+.+....   |.+.....++|+++++++      +.  +++++|+|+++++..++.++   .++||+|+
T Consensus        10 ~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~------~~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl   78 (375)
T 2fnu_A           10 CLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFL------GV--KHALVFNSATSALLTLYRNFSEFSADRNEII   78 (375)
T ss_dssp             CCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHH------TC--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred             CCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHh------CC--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence            467889999999886532   333456789999999998      33  38999999999999999999   88999999


Q ss_pred             eeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769          136 LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM  215 (419)
Q Consensus       136 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~  215 (419)
                      ++.|+|+++...+...|.+++.++++++  ..+|++.+++++++++++|++++|   ||.+.+   +++|.++|+++|++
T Consensus        79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~  150 (375)
T 2fnu_A           79 TTPISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLS  150 (375)
T ss_dssp             ECSSSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred             ECCCccHhHHHHHHHCCCEEEEeccCCC--CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence            9999999999999999999999887643  268999999998878888888776   999998   88999999999999


Q ss_pred             EEEcccccccccCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc----
Q 014769          216 VVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY----  289 (419)
Q Consensus       216 li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~----  289 (419)
                      +|+|++|+.+.....  ..+..++    .+.+.|+|  |.++. |  +|++++.+.      +++++.++......    
T Consensus       151 li~D~a~~~~~~~~~--~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~~~~~~~~~  215 (375)
T 2fnu_A          151 FLSDSSHALGSEYQN--KKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLFRSHGMLKK  215 (375)
T ss_dssp             EEEECTTCTTCEETT--EETTSSS----SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHHTBTTEEES
T ss_pred             EEEECccccCCeECC--eeccccC----CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHHHhcCCccc
Confidence            999999987543211  1122221    26777888  99754 6  788887431      14666665443111    


Q ss_pred             -------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----CceEEEEee
Q 014769          290 -------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-----EGSMVTMVK  351 (419)
Q Consensus       290 -------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----~~g~~~~~~  351 (419)
                                   ...+.... ++ ....   .+++++..++.+++++++.+.|+++|++... .+     ..++++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~-a~-~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~  289 (375)
T 2fnu_A          216 DFFEGEVKSIGHNFRLNEIQS-AL-GLSQ---LKKAPFLMQKREEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLYPIL  289 (375)
T ss_dssp             SSSCEEESSCCCBCCCCHHHH-HH-HHHH---HTTHHHHHHHHHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCEEEE
T ss_pred             cccccccccccccCCCCHHHH-HH-HHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEEEEE
Confidence                         11222222 22 1111   2346677888899999999999998777633 33     123455677


Q ss_pred             cCcccccCCCCHHHHHHHHHHhcCeEeecCCC-------CC-------C-------CCeEEEEee--cCHHHHHHHHHHH
Q 014769          352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIY-------VG-------L-------KNWLRIAFC--AEPSALKDGLGRM  408 (419)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------~~-------~-------~~~~Ris~~--~~~~~l~~~l~~l  408 (419)
                      ++...   ..+..++...| .++||.+..+..       |+       .       .+++||+++  .++++++++++.|
T Consensus       290 ~~~~~---~~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l  365 (375)
T 2fnu_A          290 MHQKF---FTCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSV  365 (375)
T ss_dssp             ECGGG---GGGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred             eCccc---cchHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHH
Confidence            76321   00355677666 567999883211       11       1       268999996  4899999999999


Q ss_pred             HHHHHHH
Q 014769          409 KAFCQRH  415 (419)
Q Consensus       409 ~~~~~~~  415 (419)
                      +++++++
T Consensus       366 ~~~~~~~  372 (375)
T 2fnu_A          366 LKTFESF  372 (375)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998765

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.96  E-value=6.7e-28  Score=229.84  Aligned_cols=333  Identities=11%  Similarity=0.041  Sum_probs=225.6

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC------CCCCCHHHH----HHHHHHHHhhCCCCCCCCcE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPAR----RAIADYLSRDLPYKLSADDV  110 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr----~~ia~~l~~~~~~~~~~~~i  110 (419)
                      +..+++++.++|       .++.+++++.+.+.......|+      ......+++    +++++++      +.+++.|
T Consensus        23 ~~~~~~~~~~~~-------~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~------g~~~~~i   89 (405)
T 2vi8_A           23 HAKIELIASENF-------VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF------GAEHANV   89 (405)
T ss_dssp             HHSEECCTTCCC-------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH------TCSEEEC
T ss_pred             hcceeeccCccc-------CCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh------CCCceEE
Confidence            345677765542       2789999998887522111222      111234455    4666665      3344444


Q ss_pred             EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH-H--HhhcC--CEEEEEeccCCCCcccChHHHHHhhcC-CccEE
Q 014769          111 YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG-I--AQRKQ--VEVRHFDLLPERNWEVDLDAVEALADK-NTAAM  184 (419)
Q Consensus       111 ~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v  184 (419)
                      ++++| ++++..++.++.++||+|+++.|+|..+.. .  +...|  ..+..+++++ .++.+|++.+++++++ +++++
T Consensus        90 ~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v  167 (405)
T 2vi8_A           90 QPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLI  167 (405)
T ss_dssp             CCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEE
T ss_pred             EecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEE
Confidence            45665 999999999999999999999999987743 1  12333  3666666543 3567999999999875 67776


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGW  263 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~  263 (419)
                      ++ +|+|+ |...+   +++|.++|+++|+++|+||+|+........ ... .+..  ..+++.|+||.++ .+|   ||
T Consensus       168 ~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~-~~~~--~di~~~s~sK~~~g~~g---G~  235 (405)
T 2vi8_A          168 VA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGL-HPN-PVPY--AHFVTTTTHKTLRGPRG---GM  235 (405)
T ss_dssp             EE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTS-SCC-STTT--CSEEEEESSSTTCCCSC---EE
T ss_pred             EE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCc-CCC-cccc--CCEEEEeccccCCCCCC---eE
Confidence            65 55553 45555   899999999999999999999953322111 111 1111  2288899999986 455   99


Q ss_pred             EEeeCCCCccchhhHHHHHHhhh-ccc-cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDCL-SIY-SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK  341 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  341 (419)
                      +++++        ++++.++... ... ++++.....++..+++.....++++..++++++++.+.+.|+++ ++.++ .
T Consensus       236 ~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~  305 (405)
T 2vi8_A          236 ILCQE--------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV-S  305 (405)
T ss_dssp             EEECH--------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-G
T ss_pred             EEEcH--------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe-c
Confidence            99864        5777676553 222 33344445555556654323578888999999999999999988 77733 4


Q ss_pred             C-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC----CC--CCCeEEEEee------cCHHHHHHHHHHH
Q 014769          342 P-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY----VG--LKNWLRIAFC------AEPSALKDGLGRM  408 (419)
Q Consensus       342 p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~----~~--~~~~~Ris~~------~~~~~l~~~l~~l  408 (419)
                      | ..++++|+.++...    .+..++...| .++||.+.+|..    ++  ..+++|++++      .+++++++++++|
T Consensus       306 ~~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l  380 (405)
T 2vi8_A          306 GGTDNHLLLVDLRPQQ----LTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII  380 (405)
T ss_dssp             GSCSSSEEEEECGGGT----CCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred             CCCCceEEEEEccCCC----CCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHH
Confidence            3 46888999886421    1455666555 778999999863    22  2578999996      3799999999999


Q ss_pred             HHHHHHH
Q 014769          409 KAFCQRH  415 (419)
Q Consensus       409 ~~~~~~~  415 (419)
                      ++++++.
T Consensus       381 ~~~~~~~  387 (405)
T 2vi8_A          381 GLVLKNV  387 (405)
T ss_dssp             HHHHTCT
T ss_pred             HHHHhcc
Confidence            9998654

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.96  E-value=1.6e-27  Score=226.58  Aligned_cols=281  Identities=19%  Similarity=0.182  Sum_probs=196.9

Q ss_pred             CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEE
Q 014769           83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHF  158 (419)
Q Consensus        83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~  158 (419)
                      .....++++.+++++      +.+  +.++++++++++..++.++.++||+|+++.|+|+++...+    ...|.++..+
T Consensus        64 ~~~~~~l~~~la~~~------g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~  135 (398)
T 1gc0_A           64 NPTLNLLEARMASLE------GGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV  135 (398)
T ss_dssp             CHHHHHHHHHHHHHH------TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE
T ss_pred             ChHHHHHHHHHHHHh------CCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE
Confidence            345678899999887      322  5556666689999999999999999999999999876654    6678888887


Q ss_pred             eccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769          159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                      +.       .|++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|..+.+..    ++ .+
T Consensus       136 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~~  200 (398)
T 1gc0_A          136 DM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-EL  200 (398)
T ss_dssp             CT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-GG
T ss_pred             CC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh
Confidence            64       2789999999888999999999999999998   9999999999999999999999765431    12 22


Q ss_pred             CCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHH-HHHhhhc--cccCCchHHHHHHHHHHcccchHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIID-SIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCK  314 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~-~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~  314 (419)
                         +..+++.|+||.++.+|.|+ ||+++++        +.+. .++....  .+++.++..+.++...++.     +..
T Consensus       201 ---~~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~  264 (398)
T 1gc0_A          201 ---GADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNL  264 (398)
T ss_dssp             ---TCSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHH
T ss_pred             ---CceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HHH
Confidence               23488899999999999998 9998864        3443 4544433  2445677777777666654     344


Q ss_pred             HHHHHHHHHHHHHHHhhcCCC--------------CCCCCC--CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEe
Q 014769          315 LIDTLRESAEICYDGVKEIPC--------------ISCPNK--PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIV  378 (419)
Q Consensus       315 ~~~~~~~~~~~l~~~l~~~~~--------------~~~~~~--p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v  378 (419)
                      ..++..++.+.+.+.|++++.              +.++..  +..|.++.+.++.        ..+.+..++.+.++.+
T Consensus       265 ~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~~  336 (398)
T 1gc0_A          265 RMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLFS  336 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSSE
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCce
Confidence            455566666666666665432              221111  1234455556642        3344566667788876


Q ss_pred             ec---CCCC----------------------CC-CCeEEEEeec--CHHHHHHHHHHHHH
Q 014769          379 TP---GIYV----------------------GL-KNWLRIAFCA--EPSALKDGLGRMKA  410 (419)
Q Consensus       379 ~~---g~~~----------------------~~-~~~~Ris~~~--~~~~l~~~l~~l~~  410 (419)
                      ..   |+..                      +. ++++|+|++.  ++++++.+.+.|++
T Consensus       337 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~  396 (398)
T 1gc0_A          337 RAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA  396 (398)
T ss_dssp             ECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             eccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence            55   3220                      11 4799999974  45666666666654

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.96  E-value=8.7e-29  Score=240.22  Aligned_cols=295  Identities=11%  Similarity=0.058  Sum_probs=210.4

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCe---EEeeCCCCCCcH----HHHhhcCCEEEE
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN---VLLPRPGWPYYE----GIAQRKQVEVRH  157 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~---vlv~~p~~~~~~----~~~~~~g~~~~~  157 (419)
                      -..++++.+++++      +.++++|++|+|++++++.++.++.++|+.   |+++.|+|++..    ..++..|.++..
T Consensus       112 ~~~~l~~~la~~~------g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~  185 (465)
T 3e9k_A          112 GDESIVGLMKDIV------GANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEE  185 (465)
T ss_dssp             TTHHHHGGGHHHH------TCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHH
T ss_pred             hHHHHHHHHHHHc------CCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCccee
Confidence            3467888888887      567899999999999999999999876655   999999998743    356667877521


Q ss_pred             --Eecc-CCCCcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC
Q 014769          158 --FDLL-PERNWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP  231 (419)
Q Consensus       158 --~~~~-~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  231 (419)
                        +.+. .++++.+|+++++++++   +++++|++++|+||||.+++   +++|.++|+++|+++|+|++|+...    .
T Consensus       186 ~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~----~  258 (465)
T 3e9k_A          186 SMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGN----V  258 (465)
T ss_dssp             HEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTT----S
T ss_pred             eeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCC----c
Confidence              1111 23456789999999986   57889999999999999999   8899999999999999999998622    2


Q ss_pred             CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------------------------h
Q 014769          232 YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------------------------L  286 (419)
Q Consensus       232 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------------------------~  286 (419)
                      ...+..++.   .++++|++|.+.....++|++++++.        +.+.+...                         .
T Consensus       259 ~~~~~~~~~---D~~~~s~~K~l~~gp~~~g~l~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  327 (465)
T 3e9k_A          259 ELYLHDWGV---DFACWCSYKYLNAGAGGIAGAFIHEK--------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVC  327 (465)
T ss_dssp             CCCHHHHTC---CEEEECSSSTTCCCTTCCCEEEECGG--------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGG
T ss_pred             CCchhhcCC---CEEEECcccccccCCCceEEEEEcHH--------HHhhcCCcccCccCCCCCcccccCCCcCcCCChH
Confidence            222223333   38889999997433346899988652        21111100                         0


Q ss_pred             -ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC----------CCCCCCCCCC----ceEEEEee
Q 014769          287 -SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----------PCISCPNKPE----GSMVTMVK  351 (419)
Q Consensus       287 -~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~~~~~~~~p~----~g~~~~~~  351 (419)
                       ...++++.....++..+++......+++.+++++++++++.+.|+++          +++.++ .|.    .|.++++.
T Consensus       328 ~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~~~  406 (465)
T 3e9k_A          328 GFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLTIT  406 (465)
T ss_dssp             GGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEEEE
T ss_pred             HhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEEEE
Confidence             00125666666666666654333347888889999999999999874          577733 444    36677777


Q ss_pred             cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHHh
Q 014769          352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      ++.       +..++...| .++||.+..    ..++++|+++ .  .++++++++++.|++++++..
T Consensus       407 ~~~-------~~~~l~~~L-~~~Gi~v~~----~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~  462 (465)
T 3e9k_A          407 FSV-------PNKDVFQEL-EKRGVVCDK----RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE  462 (465)
T ss_dssp             ECC-------TTCCHHHHH-HTTTEECEE----ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred             ecC-------CHHHHHHHH-HHCCEEEec----CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence            762       234566666 566999863    3468999997 3  589999999999999987643

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.96  E-value=2.4e-27  Score=224.54  Aligned_cols=284  Identities=17%  Similarity=0.196  Sum_probs=201.5

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~  159 (419)
                      .+..++++++++++      +.+ +.|++++| ++++..++.++.++||+|+++.|+|++...    .++..|.++..++
T Consensus        52 ~~~~~l~~~la~~~------~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~  123 (386)
T 1cs1_A           52 PTRDVVQRALAELE------GGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD  123 (386)
T ss_dssp             HHHHHHHHHHHHHH------TCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred             ccHHHHHHHHHHHh------CCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence            46789999999998      333 56666655 999999999999999999999999987433    2466788888876


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      .+       |++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+..    ++ .+ 
T Consensus       124 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~-  187 (386)
T 1cs1_A          124 QG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----PL-AL-  187 (386)
T ss_dssp             TT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG-
T ss_pred             CC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc-cc-
Confidence            42       789999999888999999999999999998   8999999999999999999999865431    12 22 


Q ss_pred             CCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                        +..+++.|+||.++.+|.|+ ||++++++       ++++.++.... .+.+.++..+.++...++.     +....+
T Consensus       188 --~~di~~~s~sK~~~~~~~~~~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~  253 (386)
T 1cs1_A          188 --GADLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPRME  253 (386)
T ss_dssp             --TCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred             --CceEEEEcCcccccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----HHHHHH
Confidence              34588999999998999987 99998641       46666765543 2345677777666555543     444555


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKP----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  381 (419)
                      .+.++.+.+.+.|++++.+..+..|                ..|.++.+.++.       ...++ ...+.++||.+.+.
T Consensus       254 ~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~l~~~gi~~~~~  325 (386)
T 1cs1_A          254 LAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------DEQTL-RRFLGGLSLFTLAE  325 (386)
T ss_dssp             HHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------CHHHH-HHHHHTCSSSEEBS
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------CHHHH-HHHHHhCCcceEcc
Confidence            6677777777777765432111011                124455555642       23344 45557889988642


Q ss_pred             CCCC--------------------------C-CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          382 IYVG--------------------------L-KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       382 ~~~~--------------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      + ++                          . ++++|++++.  ++.++.++++.+++++..
T Consensus       326 ~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~~  384 (386)
T 1cs1_A          326 S-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAAN  384 (386)
T ss_dssp             C-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHT
T ss_pred             c-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHhh
Confidence            1 11                          1 4799999976  345556666666665543

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.96  E-value=6.8e-29  Score=239.51  Aligned_cols=338  Identities=13%  Similarity=0.091  Sum_probs=220.1

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHH-H-HHHH---HHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAE-D-AIVD---AVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~-~-a~~~---~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +|..++||+.|.+...... .+|.+. + ++.+   ++....  .|++ .+..+.+..+++.+.+..+ ..++++|++|+
T Consensus        52 ~g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~--~~~~-~~~~~~~~~la~~la~~~~-~~~~~~v~~~~  126 (449)
T 2cjg_A           52 TGRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNK--PSNS-DVYSVAMARFVETFARVLG-DPALPHLFFVE  126 (449)
T ss_dssp             TCCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCC--CCTT-TCCCHHHHHHHHHHHHHHC-CTTCCEEEEES
T ss_pred             CCcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcC--CCCc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEEeC
Confidence            3667889887764322222 478999 8 9999   776543  2331 1223344444444444333 24678999999


Q ss_pred             cHHHHHHHHHHHhc---C----------C-CCeEEeeCCCCCCcHHHHhhc---------CC-----EEEEEeccCCCCc
Q 014769          115 GCKQAVEVILSVLA---R----------P-GANVLLPRPGWPYYEGIAQRK---------QV-----EVRHFDLLPERNW  166 (419)
Q Consensus       115 g~~~al~~~~~~l~---~----------~-gd~vlv~~p~~~~~~~~~~~~---------g~-----~~~~~~~~~~~~~  166 (419)
                      |+++|++.+++.+.   .          + ||+|++.+|+|+++...+...         +.     ++..++.+.....
T Consensus       127 ~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  206 (449)
T 2cjg_A          127 GGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLD  206 (449)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCC
T ss_pred             chHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhh
Confidence            99999999987653   2          2 899999999999764432221         12     3344443210011


Q ss_pred             --------ccChHHHHHhhc---CCccEEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769          167 --------EVDLDAVEALAD---KNTAAMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT  233 (419)
Q Consensus       167 --------~~~~~~l~~~~~---~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  233 (419)
                              ..+++.|++.++   +++++ ++++| +|||| .+.+.+++++|.++|++||+++|+||+|+++.+.|... 
T Consensus       207 ~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~-  284 (449)
T 2cjg_A          207 EPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAW-  284 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-
T ss_pred             ccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcce-
Confidence                    245566888774   34444 55566 68999 58999999999999999999999999999876655421 


Q ss_pred             CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH-----Hh-hhccccCCchHHHHHHHHHHccc
Q 014769          234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI-----KD-CLSIYSDIPTFIQGAIPQILEKT  307 (419)
Q Consensus       234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l-----~~-~~~~~~~~~~~~~~a~~~~l~~~  307 (419)
                      .+..++...+++   |+||.+     |+||+++++        ++++.+     .. ....+++.+++++.++.++|+..
T Consensus       285 ~~~~~~~~~di~---t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~  348 (449)
T 2cjg_A          285 AYQQLDVAPDIV---AFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVI  348 (449)
T ss_dssp             THHHHTCCCSEE---EECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred             eecccCCCceEE---EecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHH
Confidence            222222222333   789986     699999865        344431     11 12235677888998888888753


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhc----CCC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC
Q 014769          308 KEDFFCKLIDTLRESAEICYDGVKE----IPC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~l~~~l~~----~~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~  382 (419)
                      ..   ++..++++++++++.+.|++    ++. +. ...+. |.|+++.++..     .+..++...|+ ++||.+.|+.
T Consensus       349 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~~~-g~~~~~~~~~~-----~~~~~~~~~l~-~~Gv~v~~~g  417 (449)
T 2cjg_A          349 EA---EGLFERAVQHGKYLRARLDELAADFPAVVL-DPRGR-GLMCAFSLPTT-----ADRDELIRQLW-QRAVIVLPAG  417 (449)
T ss_dssp             HH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSE-EEEEE-TTEEEEECSSH-----HHHHHHHHHHH-HTTEECEEET
T ss_pred             Hh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEeec-cEEEEEEECCh-----HHHHHHHHHHH-HCCeEEecCC
Confidence            22   23456667777777777764    343 33 22333 55667777632     12456777776 5799999873


Q ss_pred             CCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          383 YVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       383 ~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                          .+++|+++  ..+++++++++++|+++++++
T Consensus       418 ----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          418 ----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             ----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence                58999977  468999999999999998764

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.96  E-value=4.9e-28  Score=229.73  Aligned_cols=324  Identities=14%  Similarity=0.107  Sum_probs=222.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      -+++++++.|.|.      .++.+.+++.+.+...   .|. +..+..++|+++++++.      .  +++++++|++++
T Consensus        21 ~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~~gt~a   83 (391)
T 3dr4_A           21 MSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG------V--KHAIACNNGTTA   83 (391)
T ss_dssp             -------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT------C--SEEEEESSHHHH
T ss_pred             cCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC------C--CcEEEeCCHHHH
Confidence            4567889998863      2367778888877653   344 56788999999999983      2  388899999999


Q ss_pred             HHHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          120 VEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       120 l~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      +..++.++ .++||+|+++.|+|+++...+...|.+++.+++++ +++.+|++.+++++++++++|+   |+||||...+
T Consensus        84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~  159 (391)
T 3dr4_A           84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQICD  159 (391)
T ss_dssp             HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC
T ss_pred             HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChhh
Confidence            99999999 89999999999999999999999999999998864 3578999999999987776665   5789999988


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccch
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                         +++|.++|+++|+++|+|++|+.+. +.+..   ...+.    .+.+.|||  |.  ++|.+.|+++++++      
T Consensus       160 ---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~----di~~~S~s~~K~--l~~g~gg~~~~~~~------  221 (391)
T 3dr4_A          160 ---MDPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLG----DCATFSFFGNAI--ITTGEGGMITTNDD------  221 (391)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECBTTSS--SCCBSCEEEEESCH------
T ss_pred             ---HHHHHHHHHHcCCEEEEECcccccceECCee---ecccC----CEEEEECCCCCc--CCcCCeEEEEECCH------
Confidence               8899999999999999999998633 22211   11221    16667777  66  45567899888652      


Q ss_pred             hhHHHHHHhhhccccC-------------CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-
Q 014769          276 SGIIDSIKDCLSIYSD-------------IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-  341 (419)
Q Consensus       276 ~~~~~~l~~~~~~~~~-------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-  341 (419)
                       ++.+.++........             .......++.....   .+.+++..++.+++.+.+.+.|+++ ++..... 
T Consensus       222 -~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  296 (391)
T 3dr4_A          222 -DLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQ---LERVDEHLAARERVVGWYEQKLARL-GNRVTKPH  296 (391)
T ss_dssp             -HHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCC
T ss_pred             -HHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcC
Confidence             355555544321100             11112222222222   2345667777888888889999887 6663322 


Q ss_pred             -C----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------------------CCCeEEEEee-
Q 014769          342 -P----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------------------LKNWLRIAFC-  395 (419)
Q Consensus       342 -p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------------~~~~~Ris~~-  395 (419)
                       +    ..++.+++.++..   ...+..++...| .++||.+.++....                    ....+|+++. 
T Consensus       297 ~~~~~~~~~~~~~i~~~~~---~~~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~  372 (391)
T 3dr4_A          297 VALTGRHVFWMYTVRLGEG---LSTTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHA  372 (391)
T ss_dssp             CCTTSCCCCSSEEEEECSS---CSSCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCT
T ss_pred             CCCCCcceeEEEEEEECCc---cchhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCC
Confidence             1    1222345556531   012466777776 56799999875210                    0357999984 


Q ss_pred             -cCHHHHHHHHHHHHHHH
Q 014769          396 -AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       396 -~~~~~l~~~l~~l~~~~  412 (419)
                       .++++++++++.|++++
T Consensus       373 ~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          373 GLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             TCCHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHh
Confidence             58999999999998654

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.96  E-value=4.9e-29  Score=242.22  Aligned_cols=351  Identities=15%  Similarity=0.138  Sum_probs=222.0

Q ss_pred             CCCeeeccCCCCCC--CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           41 PRPVVPLGYGDPTA--FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        41 ~~~~i~l~~g~~~~--~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      +.++++|..|.+-.  .+.+++ +.+.+++.+++..+. ..|+++.+..++|+++++++.        .+++++|+|+++
T Consensus        31 g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~  100 (467)
T 2oqx_A           31 GMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRG  100 (467)
T ss_dssp             TSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CC
T ss_pred             CCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHH
Confidence            55556666654310  011223 677788888776543 368877788999999999982        368999999999


Q ss_pred             HHHHHHHHhcCC-----C----CeEEeeCCCCCCcHHHHhhcCCEEEEEec----cCC----CCcccChHHHHHhhcC--
Q 014769          119 AVEVILSVLARP-----G----ANVLLPRPGWPYYEGIAQRKQVEVRHFDL----LPE----RNWEVDLDAVEALADK--  179 (419)
Q Consensus       119 al~~~~~~l~~~-----g----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~----~~~----~~~~~~~~~l~~~~~~--  179 (419)
                      |+..++.+++++     |    |.|++..+.|..+.......|..+.....    +..    .++.+|++.|++++++  
T Consensus       101 A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~  180 (467)
T 2oqx_A          101 AEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG  180 (467)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC
Confidence            999999999888     8    99887743333333444555655443211    111    2356899999999873  


Q ss_pred             --CccEEEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEcccccc----------cccCCCCCCCccc--cCCCCcE
Q 014769          180 --NTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGH----------LTFGSIPYTPMGL--FGSIVPV  244 (419)
Q Consensus       180 --~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~~--~~~~~~~  244 (419)
                        ++++|++++|+||| |.+++.+++++|.++|++||+++|+|+++..          ..+.+.....+..  +... . 
T Consensus       181 ~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~-d-  258 (467)
T 2oqx_A          181 PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYA-D-  258 (467)
T ss_dssp             GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGC-S-
T ss_pred             CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccC-C-
Confidence              68899999999998 8999999999999999999999999976643          1222322111110  0111 1 


Q ss_pred             EEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc------ccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          245 ITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI------YSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       245 i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                      +++.|+||.++++ |   ||++++++. +.   +.+..++.....      ....+.....++...++....   ++..+
T Consensus       259 ~~~~s~sK~~g~~~G---g~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~~  328 (467)
T 2oqx_A          259 MLAMSAKKDAMVPMG---GLLCMKDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWLA  328 (467)
T ss_dssp             EEEEESSSTTCCSSC---EEEEECSGG-GH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHHH
T ss_pred             eEEEecccccCCCCc---eEEEecChh-HH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHHH
Confidence            4577999998766 4   777775410 11   133344332211      111222222222222222111   12334


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc--ccccCCC-CHHHHHHHHHHhcCeEeecCCCC--C-------
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP--WLLEDIN-DDIEFALKLAKEESVIVTPGIYV--G-------  385 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~--~~~~~~~-~~~~~~~~ll~~~gv~v~~g~~~--~-------  385 (419)
                      +..++++.+.+.|+++ ++. +. |.+++++|+.++.  ....... +...+...|+.++||.+.|+..|  +       
T Consensus       329 ~~~~~~~~l~~~L~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~  405 (467)
T 2oqx_A          329 YRIAQVQYLVDGLEEI-GVV-CQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGK  405 (467)
T ss_dssp             HHHHHHHHHHHHHHHT-TCC-EE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred             HHHHHHHHHHHHHHHC-CCe-ee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccc
Confidence            4567788888888887 777 44 7778889988742  0000000 13445667757889999985532  1       


Q ss_pred             ----CCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769          386 ----LKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       386 ----~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~  416 (419)
                          ..+++|++++   .+++++++++++|++++++..
T Consensus       406 ~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~  443 (467)
T 2oqx_A          406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA  443 (467)
T ss_dssp             BCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred             cccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence                1379999996   789999999999999997653

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.96  E-value=2.3e-27  Score=227.50  Aligned_cols=338  Identities=13%  Similarity=0.066  Sum_probs=211.7

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC------CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY------ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      +.++|..+..      +.+|.+++++.+++.+.....|      ........+++...+.+.+..|  .+. ..++++|+
T Consensus        33 ~~i~l~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~-~~v~~~~G  103 (425)
T 3ecd_A           33 SQVELIASEN------IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN--AGH-ANVQPHSG  103 (425)
T ss_dssp             HSEECCTTCC------CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT--CSE-EECCCSSH
T ss_pred             cceeeecccC------CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC--CCC-ceeecCch
Confidence            4677766541      2389999999888753211122      2211111222222243433333  222 22458888


Q ss_pred             HHHHHHHHHHhcCCCCeEEeeCCCCCC---cHHHHhhcCC--EEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCC
Q 014769          117 KQAVEVILSVLARPGANVLLPRPGWPY---YEGIAQRKQV--EVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPG  190 (419)
Q Consensus       117 ~~al~~~~~~l~~~gd~vlv~~p~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~  190 (419)
                      ++++..++.++.++||+|+++.|+|.+   +.......|.  .+..+++++ +++.+|++.+++++. +++++|++++|+
T Consensus       104 s~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~  182 (425)
T 3ecd_A          104 AQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGFSA  182 (425)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEECSC
T ss_pred             HHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEcccc
Confidence            999999999999999999999999987   2222223444  444555443 357899999999886 578999999999


Q ss_pred             CccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769          191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP  269 (419)
Q Consensus       191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  269 (419)
                      ||+  ..+   +++|.++|+++|+++|+||+|.. +.+.+.....+..     ..+++.|+||.+  +|+|+||++++++
T Consensus       183 ~~~--~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-----~di~~~s~sK~l--~g~~~g~~~~~~~  250 (425)
T 3ecd_A          183 YPR--KLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-----AHVVTSTTHKTL--RGPRGGFVLTNDE  250 (425)
T ss_dssp             CCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-----CSEEEEESSGGG--CCCSCEEEEESCH
T ss_pred             CCC--cCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-----CcEEEecCCccc--CCCCcEEEEeCCH
Confidence            964  444   78999999999999999999643 3344432222211     127889999985  6788999998752


Q ss_pred             CCccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 014769          270 NGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV  347 (419)
Q Consensus       270 ~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~  347 (419)
                             ++.+.+......  ..+++.....++..++.....+++++..++++++++.+.+.|.+. ++.++..+.++++
T Consensus       251 -------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~  322 (425)
T 3ecd_A          251 -------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHL  322 (425)
T ss_dssp             -------HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred             -------HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceE
Confidence                   455666554322  223444444444444443234567788889999999999999885 7763322356778


Q ss_pred             EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC------CCCeEEEEee------cCHHHHHHHHHHHHHHHHHH
Q 014769          348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG------LKNWLRIAFC------AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~------~~~~~Ris~~------~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +|+.++...    .+...+ .++++++||.+.++..++      ..+++|+++.      .++++++++++.|++++++.
T Consensus       323 ~~~~~~~~~----~~~~~~-~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~  397 (425)
T 3ecd_A          323 LLVDLRPKG----LKGAQV-EQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL  397 (425)
T ss_dssp             EEEECGGGT----CCHHHH-HHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCC----CCHHHH-HHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence            888876421    134444 455578899999443221      2468999962      24899999999999998765

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.96  E-value=2.1e-28  Score=230.76  Aligned_cols=325  Identities=14%  Similarity=0.146  Sum_probs=222.1

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV  122 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~  122 (419)
                      ++++++.+.|      +.++.+.+++.+.+...   .|.+..+..++|+.+++++.      .  +++++++|+++++..
T Consensus         4 ~~~~l~~~~~------~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~~i~~~sgt~al~~   66 (373)
T 3frk_A            4 SFASFKPMHD------EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN------V--NYCIGCGNGLDALHL   66 (373)
T ss_dssp             CSCCCHHHHH------HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT------S--SEEEEESCHHHHHHH
T ss_pred             cccCCCcccC------CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHH
Confidence            3455555542      34678888888887654   35666788999999999982      2  489999999999999


Q ss_pred             HHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769          123 ILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       123 ~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      ++.++ .++||+|+++.|+|.++...+...|.+++.++++++ ++.+|++++++++++++++|+   |+||||...+   
T Consensus        67 ~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---  139 (373)
T 3frk_A           67 ILKGYDIGFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITEKTKAII---AVHLYGQPAD---  139 (373)
T ss_dssp             HHHHTTCCTTCEEEEETTSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---
T ss_pred             HHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---
Confidence            99999 899999999999999999999999999999988643 568999999999987777666   7789999988   


Q ss_pred             HHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          202 LQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       202 l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++|.++|+++|+++|+|++|+.+. +++..   ...+.    .+++.|||  |.++.+| +.|+++++++       ++
T Consensus       140 l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~----d~~~~S~~~~K~l~~~g-~gg~~~~~~~-------~~  204 (373)
T 3frk_A          140 MDEIKRIAKKYNLKLIEDAAQAHGSLYKGMK---VGSLG----DAAGFSFYPAKNLGSLG-DGGAVVTNDK-------DL  204 (373)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSS-SCEEEEESCH-------HH
T ss_pred             HHHHHHHHHHcCCEEEEECCcccCCEECCEe---ccccc----cEEEEeCcCCCccCccc-eeEEEEeCCH-------HH
Confidence            8899999999999999999998633 22221   11111    27777877  8864434 3788887652       45


Q ss_pred             HHHHHhhhcc-------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769          279 IDSIKDCLSI-------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS  345 (419)
Q Consensus       279 ~~~l~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  345 (419)
                      .+.++.....             .+..+.+...+....+     +.+++..++.+++.+.+.+.|++++ +.....+.++
T Consensus       205 ~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~  278 (373)
T 3frk_A          205 AEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL-----KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYA  278 (373)
T ss_dssp             HHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTE
T ss_pred             HHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCC
Confidence            5555544321             1112322222221112     3356667777888888888888875 5422223323


Q ss_pred             EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----------C------------CCeEEEEee--cCHHH
Q 014769          346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----------L------------KNWLRIAFC--AEPSA  400 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----------~------------~~~~Ris~~--~~~~~  400 (419)
                      ...|..++...    .+..++...| .++||.+.++....           .            .+.+|+++.  .++++
T Consensus       279 ~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~d  353 (373)
T 3frk_A          279 KHVWYTFVIRS----EKRDELQKYL-NNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEE  353 (373)
T ss_dssp             ECCCSSEEEEE----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHH
T ss_pred             ceeeEEEEEEe----CCHHHHHHHH-HHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHH
Confidence            22221111100    1456666666 66799998765211           0            157999994  68999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 014769          401 LKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       401 l~~~l~~l~~~~~~~~~  417 (419)
                      ++.+++.|+++..++-.
T Consensus       354 i~~~~~~l~~~~~~~~~  370 (373)
T 3frk_A          354 IEYVIDKINAWKLEHHH  370 (373)
T ss_dssp             HHHHHHHHHTCC-----
T ss_pred             HHHHHHHHHHHhhhhcc
Confidence            99999999988876643

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.96  E-value=1.8e-28  Score=235.49  Aligned_cols=345  Identities=11%  Similarity=0.032  Sum_probs=213.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      +|+.++||..|..... ....+|.+.+++.+++.......|+. ....++++.+++++    +   ++++|++++|++++
T Consensus        51 ~g~~ylD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~la~~l~~~~----~---~~~~v~~~~sGsea  121 (429)
T 4e77_A           51 DGKAYIDYVGSWGPMI-LGHNHPAIRQAVIEAVERGLSFGAPT-EMEVKMAQLVTDLV----P---TMDMVRMVNSGTEA  121 (429)
T ss_dssp             TCCEEEESSGGGTTCT-TCBTCHHHHHHHHHHHTTCSCCSSCC-HHHHHHHHHHHHHS----T---TCSEEEEESSHHHH
T ss_pred             CCCEEEECCCchhccc-cCCCCHHHHHHHHHHHHhCcccCCCC-HHHHHHHHHHHhhC----C---CCCEEEEeCcHHHH
Confidence            5888999998865321 12257999999999987654333433 23345555555554    3   47899999999999


Q ss_pred             HHHHHHHhc--CCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCc------------ccChHHHHHhhcC--Ccc
Q 014769          120 VEVILSVLA--RPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNW------------EVDLDAVEALADK--NTA  182 (419)
Q Consensus       120 l~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~------------~~~~~~l~~~~~~--~~~  182 (419)
                      ++.+++...  .+++.|++.+++|++....+. ..+.....+......+.            ..|++.|+++++.  ...
T Consensus       122 ~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  201 (429)
T 4e77_A          122 TMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV  201 (429)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred             HHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence            999998654  256899999999987654221 11111100000000000            0178889888864  345


Q ss_pred             EEEEeCCCCccc-c-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          183 AMVIINPGNPCG-N-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       183 ~v~i~~p~nptG-~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      .+++++|+|++| . ..+.+++++|.++|+++|+++|+||+|.++ ..+.. .....++...++   .|+||.++ +|+|
T Consensus       202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~~  275 (429)
T 4e77_A          202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPDL---TCLGKIIG-GGMP  275 (429)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCSE---EEEEGGGG-TTSC
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCCe---eeeccccc-CCCC
Confidence            677788876654 3 345677999999999999999999999987 44432 122222222223   38899987 7999


Q ss_pred             eEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          261 FGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      +||+++++        ++++.+...    ...+++.+++++.++.++|+... .+..++..+.....++.+.+.+..+ +
T Consensus       276 ~G~~~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~  346 (429)
T 4e77_A          276 VGAFGGRR--------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEE-N  346 (429)
T ss_dssp             CEEEEECH--------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             eEEEEECH--------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence            99999865        566666542    22345788888888888887432 2333333333333333444433334 2


Q ss_pred             CCCCCCCCceEEEEeecCcccc---------cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLL---------EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLG  406 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~---------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~  406 (419)
                      +. ...+..|.++++.++....         .......++...++ ++||.+.|+..    ..+|+++..++++++++++
T Consensus       347 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~  420 (429)
T 4e77_A          347 IP-LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSAF----EAGFMSLAHSNEDIQKTVN  420 (429)
T ss_dssp             CC-CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCCHHHHHHHHH
T ss_pred             Cc-eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecCC----CCEEEeccCCHHHHHHHHH
Confidence            32 2234557788888864200         00001256666664 56999998753    3567777789999999999


Q ss_pred             HHHHHHHH
Q 014769          407 RMKAFCQR  414 (419)
Q Consensus       407 ~l~~~~~~  414 (419)
                      +|++++++
T Consensus       421 ~l~~~l~~  428 (429)
T 4e77_A          421 AARRCFAK  428 (429)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHHh
Confidence            99998764

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.96  E-value=8.6e-28  Score=231.74  Aligned_cols=337  Identities=15%  Similarity=0.052  Sum_probs=224.9

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC---CCCHHHH--HHHH-HHHHhhCCCCCCCCcEEE-ccc
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN---SGIPPAR--RAIA-DYLSRDLPYKLSADDVYV-TLG  115 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---~g~~~lr--~~ia-~~l~~~~~~~~~~~~i~~-t~g  115 (419)
                      +.|+|..+.     + +.+|.+++++.+.+.+....+|+..   .|...++  +.++ +++.+.+|.  +  .+.+ ++|
T Consensus        46 ~~i~l~~~~-----~-~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~--~--~~~v~~~s  115 (447)
T 3h7f_A           46 DTLEMIASE-----N-FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGA--E--FANVQPHS  115 (447)
T ss_dssp             HSEECCTTC-----C-CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--S--EEECCCSS
T ss_pred             CceeEecCC-----C-CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCC--C--ceEEEeCC
Confidence            568885442     1 3488999999887754322234331   2444444  4444 555554442  2  3444 788


Q ss_pred             HHHHHHHHHHHhcCCCCeEEeeCCCCCCcH-H--H--HhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCC
Q 014769          116 CKQAVEVILSVLARPGANVLLPRPGWPYYE-G--I--AQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINP  189 (419)
Q Consensus       116 ~~~al~~~~~~l~~~gd~vlv~~p~~~~~~-~--~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p  189 (419)
                      +++++..++.+++++||+|++++|+|.++. .  .  ....+..+..++++++ ++.+|++++++++. .+++++++++|
T Consensus       116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~i~~~~~  194 (447)
T 3h7f_A          116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPA-THLIDMDAVRATALEFRPKVIIAGWS  194 (447)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTT-TCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred             HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcc-cCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence            899999999999999999999999987731 1  1  1223445666665433 46799999999885 36788888899


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      +||++.  +   +++|.++|+++|+++|+|++|.. +.+.+....++   ..  ..+++.|+||++  +|+|.||+++++
T Consensus       195 ~~~~~~--~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~---~~--~di~~~s~sK~l--~G~~gG~i~~~~  262 (447)
T 3h7f_A          195 AYPRVL--D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV---PH--ADVVSTTVHKTL--GGGRSGLIVGKQ  262 (447)
T ss_dssp             SCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST---TT--CSEEEEESSGGG--CCCSCEEEEECG
T ss_pred             CCCCcc--C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC---CC--CcEEEecCCcCC--CCCCeEEEEECH
Confidence            999876  3   89999999999999999999753 44444322222   11  127789999985  578999999865


Q ss_pred             CCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCCCC
Q 014769          269 PNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----PCISCPNKP  342 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~p  342 (419)
                              ++++.+.....  ..++++...+.++..++.....+++++..+++.++++.+.+.|++.    +++.++..+
T Consensus       263 --------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~  334 (447)
T 3h7f_A          263 --------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGG  334 (447)
T ss_dssp             --------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGS
T ss_pred             --------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCC
Confidence                    46666655432  2233444445555555554334567888889999999999999875    467644334


Q ss_pred             CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cC--CCCCCCCeEEEEee------cCHHHHHHHHHHHHH
Q 014769          343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PG--IYVGLKNWLRIAFC------AEPSALKDGLGRMKA  410 (419)
Q Consensus       343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g--~~~~~~~~~Ris~~------~~~~~l~~~l~~l~~  410 (419)
                      ..++++|+.+....     .+.+.+.++++++||.+.    |+  ..+..++++|+++.      .++++++++++.|.+
T Consensus       335 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~  409 (447)
T 3h7f_A          335 TDVHLVLVDLRDSP-----LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT  409 (447)
T ss_dssp             CSSSEEEEECTTSS-----CCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence            56778888775321     134455667788899998    66  23334688999982      468999999999999


Q ss_pred             HHHHH
Q 014769          411 FCQRH  415 (419)
Q Consensus       411 ~~~~~  415 (419)
                      ++.+.
T Consensus       410 ~l~~~  414 (447)
T 3h7f_A          410 ALATG  414 (447)
T ss_dssp             HHHSG
T ss_pred             HHhcc
Confidence            88654

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.96  E-value=7.3e-28  Score=229.06  Aligned_cols=327  Identities=11%  Similarity=0.041  Sum_probs=212.6

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC-CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE-cccHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV-TLGCKQ  118 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~-t~g~~~  118 (419)
                      .+.+++|+.|.      .++++.+++++.+..... ....+.+  ...++.+.+.+.+.+.+|.. ++++|++ |+|+++
T Consensus        38 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~  108 (398)
T 2fyf_A           38 KPRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATA  108 (398)
T ss_dssp             SCSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHH
T ss_pred             ccCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhH
Confidence            34567777552      356788888876621010 1111222  11233344444444444433 3568998 999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCC-cHHHHhhc--CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcccc
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPY-YEGIAQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN  195 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~  195 (419)
                      +++.++.+++++| .+.+..+.|.. ....+...  |..++.++++  .++..+.     .+++++++|++++|+||||.
T Consensus       109 al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~  180 (398)
T 2fyf_A          109 FWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGV  180 (398)
T ss_dssp             HHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTE
T ss_pred             HHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcce
Confidence            9999999998886 22233333321 12234555  7788888875  2333332     24567899999999999999


Q ss_pred             CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769          196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK  275 (419)
Q Consensus       196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  275 (419)
                      ++|.+++.++      +|+++|+|++|+.+...    ..+.     +..+++.|+||.++.+| ++||+++++       
T Consensus       181 ~~~~~~i~~~------~~~~vivD~a~~~~~~~----~~~~-----~~di~~~s~sK~~~~~g-g~g~l~~~~-------  237 (398)
T 2fyf_A          181 AVAVRRPEGS------DDALVVIDATSGAGGLP----VDIA-----ETDAYYFAPQKNFASDG-GLWLAIMSP-------  237 (398)
T ss_dssp             ECCCCCCTTC------C-CEEEEECTTTTTTSC----CCGG-----GCSEEEECTTSTTCSCS-SEEEEEECH-------
T ss_pred             ecchHHhhhh------cCCeEEEEeccccCCcc----cCcc-----cCcEEEEecCcccCCCC-ceEEEEECH-------
Confidence            9995555443      79999999999874321    1121     12378889999988775 599999865       


Q ss_pred             hhHHHHHHhh----------------------hccccCCchHHHHHHHHHHcccchHH-HHHHHHHHHHHHHHHHHHhhc
Q 014769          276 SGIIDSIKDC----------------------LSIYSDIPTFIQGAIPQILEKTKEDF-FCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       276 ~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~  332 (419)
                       ++++.++..                      ....++++...+.++..+++...... +++..++++++++.+.+.|++
T Consensus       238 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~  316 (398)
T 2fyf_A          238 -AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQE  316 (398)
T ss_dssp             -HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence             455555321                      01124566667777777776432222 788889999999999999998


Q ss_pred             CCCCCCCC-CC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHH
Q 014769          333 IPCISCPN-KP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGR  407 (419)
Q Consensus       333 ~~~~~~~~-~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~  407 (419)
                      ++++.++. .|  .+++++|++++..     .+..++...|.+ +||.+.+|......+++||+++  .++++++++++.
T Consensus       317 ~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~  390 (398)
T 2fyf_A          317 RPYTTPFVTDPGLRSQVVGTIDFVDD-----VDAGTVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTEC  390 (398)
T ss_dssp             STTEEESCCSGGGBCSSEEEEEECTT-----SCHHHHHHHHHH-TTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHH
T ss_pred             cCCceeccCChhhcCCcEEEEECCCC-----CCHHHHHHHHHH-CCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHH
Confidence            87777332 24  2455888888631     256778777754 5999988743223579999996  589999999999


Q ss_pred             HHHHHHH
Q 014769          408 MKAFCQR  414 (419)
Q Consensus       408 l~~~~~~  414 (419)
                      |++++++
T Consensus       391 l~~~l~~  397 (398)
T 2fyf_A          391 VDWVVER  397 (398)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9998764

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.96  E-value=8.2e-28  Score=230.32  Aligned_cols=327  Identities=12%  Similarity=0.036  Sum_probs=209.9

Q ss_pred             ChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCe
Q 014769           60 TAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN  133 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~  133 (419)
                      .+|.+.+++.+++.....      ..|........+++...+.+.+..|  .++++|++++| ++++..++.+++++||+
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~  118 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT  118 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence            588999999888743221      1222333334444433344444333  45666766666 78999999999999999


Q ss_pred             EEeeCCCCCCcH---HHHhhcC--CEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHH
Q 014769          134 VLLPRPGWPYYE---GIAQRKQ--VEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAE  207 (419)
Q Consensus       134 vlv~~p~~~~~~---~~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~  207 (419)
                      |+++.|+|..+.   ......|  .....++.+  .++.+|++.+++++++ +++++++++|+||+  ..+   +++|.+
T Consensus       119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~  191 (420)
T 3gbx_A          119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMRE  191 (420)
T ss_dssp             EEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHH
T ss_pred             EEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHH
Confidence            999999997632   2212223  344444443  4567999999999876 58899988999874  556   889999


Q ss_pred             HHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh
Q 014769          208 MARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL  286 (419)
Q Consensus       208 ~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~  286 (419)
                      +|+++|+++|+||+|.... +.+.....+.     ...+++.|+||.++  |.+.||+++++.-     .++.+.++...
T Consensus       192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~  259 (420)
T 3gbx_A          192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAV  259 (420)
T ss_dssp             HHHHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHH
T ss_pred             HHHHcCCEEEEECCcchhceecccCCcccc-----cCCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhc
Confidence            9999999999999986433 3332221211     13388999999964  5556999986410     13555555443


Q ss_pred             cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHH
Q 014769          287 SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDI  364 (419)
Q Consensus       287 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~  364 (419)
                      ..  .++++...+.++..++.....+++++..++++++++.+.+.|.+. ++.++..+..++++|+.++...    .+..
T Consensus       260 ~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----~~~~  334 (420)
T 3gbx_A          260 FPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN----LTGK  334 (420)
T ss_dssp             C----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----CCHH
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC----CCHH
Confidence            21  224444555555545544334667888899999999999999885 7764323356778888775421    1334


Q ss_pred             HHHHHHHHhcCeEeec-------CCCCCCCCeEEEEee------cCHHHHHHHHHHHHHHHHHH
Q 014769          365 EFALKLAKEESVIVTP-------GIYVGLKNWLRIAFC------AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       365 ~~~~~ll~~~gv~v~~-------g~~~~~~~~~Ris~~------~~~~~l~~~l~~l~~~~~~~  415 (419)
                      . +.++++++||.+.|       +..|+ ...+||++.      .++++++++++.|++++++.
T Consensus       335 ~-~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~  396 (420)
T 3gbx_A          335 E-ADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI  396 (420)
T ss_dssp             H-HHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             H-HHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence            4 44555788999998       33333 356999983      34799999999999888653

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.96  E-value=9e-27  Score=227.29  Aligned_cols=365  Identities=13%  Similarity=0.081  Sum_probs=248.7

Q ss_pred             hHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 014769           24 TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY  103 (419)
Q Consensus        24 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~  103 (419)
                      ....+.+.+...+.- .+++.++++.-.     ..++++.+.+++.+.+.... ..|....+..++++.+.+++.+.+|.
T Consensus        38 ~~~~~~~~~~~~i~l-~gnp~~~l~s~~-----t~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l~g~  110 (502)
T 3hbx_A           38 PKEAAYQIINDELML-DGNPRLNLASFV-----TTWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHLFNA  110 (502)
T ss_dssp             CHHHHHHHHHHHGGG-SCCGGGBTTCCS-----CCCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHhcc-CCCCCceecccc-----CCCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHHhCC
Confidence            344444444433322 245545544321     13457888888888775432 23444445678888888888888887


Q ss_pred             CCCCCcEE---EcccHHHHHHHHHHHhcCC--------CC-----eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769          104 KLSADDVY---VTLGCKQAVEVILSVLARP--------GA-----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE  167 (419)
Q Consensus       104 ~~~~~~i~---~t~g~~~al~~~~~~l~~~--------gd-----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  167 (419)
                      +.++++++   +|+|+++++..++.++..+        |+     .|+++.++|..+...+...|++++.+++++ +++.
T Consensus       111 ~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~  189 (502)
T 3hbx_A          111 PLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYV  189 (502)
T ss_dssp             CCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCS
T ss_pred             CcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCc
Confidence            65455554   5899999999998887654        76     899999999999999999999999998754 3478


Q ss_pred             cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC------CCeEEEccccccccc---CCCCCCCcccc
Q 014769          168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL------RVMVVADEVYGHLTF---GSIPYTPMGLF  238 (419)
Q Consensus       168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~  238 (419)
                      +|++.+++++++++++|++++|+||||.+.+   +++|.++|+++      |+++++|++|+.+..   .+.....+.  
T Consensus       190 ~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~--  264 (502)
T 3hbx_A          190 MDPQQAVDMVDENTICVAAILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR--  264 (502)
T ss_dssp             CCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT--
T ss_pred             CCHHHHHHHHhhCCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC--
Confidence            9999999999988999999999999999998   88889999998      999999999987542   222211121  


Q ss_pred             CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH---hhh-----c--cccCC---chHHHHHHHHHHc
Q 014769          239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK---DCL-----S--IYSDI---PTFIQGAIPQILE  305 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~---~~~-----~--~~~~~---~~~~~~a~~~~l~  305 (419)
                       ...-.++..|.+|. +..+.++|+++++++..+.      +.+.   .+.     .  +.++.   ....++++...+.
T Consensus       265 -~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l~------~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg  336 (502)
T 3hbx_A          265 -LPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDLP------EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG  336 (502)
T ss_dssp             -STTEEEEEEETTTT-TCCCSSCEEEEESSGGGSC------GGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH
T ss_pred             -CCCceEEEECcccc-cCCCCCeEEEEEeCHHHhh------HHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH
Confidence             11223667789997 6677889999887532111      1111   010     0  00111   2233333333332


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC
Q 014769          306 KTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV  384 (419)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~  384 (419)
                         .+.+.++.++..++++++.+.|+++++++++ .+ ....++.++++...   ..+..++...| .++||.+.....+
T Consensus       337 ---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~v~f~~~~~~---~~~~~~l~~~L-~~~Gi~v~~~~~p  408 (502)
T 3hbx_A          337 ---HEGYRNVMENCRENMIVLREGLEKTERFNIV-SKDEGVPLVAFSLKDSS---CHTEFEISDML-RRYGWIVPAYTMP  408 (502)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEC-SCSSSSSEEEEEESSCS---SCCHHHHHHHH-HTTTCBCCEEECC
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCCCceEEEEEecCCC---cCCHHHHHHHH-HhCCcEEeeccCC
Confidence               3567788888899999999999999778744 33 34456666775321   01345676666 6679987543322


Q ss_pred             C---CCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769          385 G---LKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       385 ~---~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .   ...++|++++  .++++++.+++.|+++++++.+
T Consensus       409 ~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~  446 (502)
T 3hbx_A          409 PNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDE  446 (502)
T ss_dssp             TTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            2   2368999995  5889999999999999987654

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.96  E-value=4.8e-27  Score=223.87  Aligned_cols=290  Identities=16%  Similarity=0.098  Sum_probs=199.4

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~  159 (419)
                      +...+|++.+++++      +  .+..++++++++|+..++.+++++||+|++++|+|.++..    .+...|.+++.++
T Consensus        82 p~~~~le~~lA~l~------g--~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~  153 (430)
T 3ri6_A           82 PTVEDLEQRLKNLT------G--ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD  153 (430)
T ss_dssp             HHHHHHHHHHHHHH------T--CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHH------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence            45678999999987      2  2346666677899999999999999999999999988766    6678899998887


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      .+       |++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+...+.    .+ ..++
T Consensus       154 ~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~-~~~g  218 (430)
T 3ri6_A          154 VM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EA-KRLG  218 (430)
T ss_dssp             TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CG-GGGT
T ss_pred             CC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----Ch-HHcC
Confidence            53       789999999989999999999999999998   889999999999999999999864321    11 1222


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEe-eCCCCcc------------chhhHHHHHHhhh--ccccCCchHHHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVT-NDPNGIF------------QKSGIIDSIKDCL--SIYSDIPTFIQGAIPQIL  304 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~------------~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l  304 (419)
                         ..+++.|+||.++.+|..+|.+++ +......            ....++..++...  ......++...+.+...+
T Consensus       219 ---~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l  295 (430)
T 3ri6_A          219 ---VDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL  295 (430)
T ss_dssp             ---CSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH
T ss_pred             ---CEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence               248899999998877766555555 3322110            0011233333221  222333433333222222


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHH
Q 014769          305 EKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFAL  368 (419)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~  368 (419)
                           +.+..+.++..++...+.+.|++.|++..+..|.                +|+.+|+.++..     .+...+++
T Consensus       296 -----~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~-----~~~~~~~~  365 (430)
T 3ri6_A          296 -----ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK-----EASYRFMD  365 (430)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH-----HHHHHHHH
T ss_pred             -----hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH-----HHHHHHHH
Confidence                 3455666777888889999999888776454554                554888888621     12345555


Q ss_pred             HHHHhcCeEeecCCCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          369 KLAKEESVIVTPGIYVG-----------------------LKNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       369 ~ll~~~gv~v~~g~~~~-----------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      .+ +..++.+++|..+.                       .+++||||++.+  +.+++++.|++++
T Consensus       366 ~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E--~~~dl~~dl~~al  429 (430)
T 3ri6_A          366 AL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIE--EIEDLKEDILQAL  429 (430)
T ss_dssp             HC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSS--CHHHHHHHHHHHH
T ss_pred             hC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHhh
Confidence            44 55667777777554                       147899999863  4445555555554

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.96  E-value=5.5e-27  Score=222.07  Aligned_cols=284  Identities=20%  Similarity=0.141  Sum_probs=205.1

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~  159 (419)
                      ....++++.+++++      +  .+++++++|++++++.++.++.++||+|+++.|+|++....+    ...|.++..++
T Consensus        66 ~~~~~l~~~la~~~------g--~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~  137 (392)
T 3qhx_A           66 PTRTALEAALAAVE------D--AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA  137 (392)
T ss_dssp             HHHHHHHHHHHHHT------T--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence            34568888888887      2  247899999999999999999999999999999998765554    66788988887


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      .+       |++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+.+...    .++ .++
T Consensus       138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~----~~~-~~~  202 (392)
T 3qhx_A          138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ----QPL-SLG  202 (392)
T ss_dssp             TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGG-GGT
T ss_pred             CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC----ChH-HhC
Confidence            52       889999999989999999999999999998   999999999999999999999854321    111 222


Q ss_pred             CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                         ..+++.|+||.++.+| +++||++++++       ++.+.++.... .....++..+.++...++.     +....+
T Consensus       203 ---~di~~~S~sK~lg~~g~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~~~  267 (392)
T 3qhx_A          203 ---ADVVLHSTTKYIGGHSDVVGGALVTNDE-------ELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLRMQ  267 (392)
T ss_dssp             ---CSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred             ---CcEEEEcCccccCCCCCceEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHH
Confidence               3488999999988877 79999998642       46666665543 3456677777776666654     444556


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  381 (419)
                      +..++.+.+.+.|+++|.+..+..|.                .|..+++.++...    .....++..+ +..++.++.|
T Consensus       268 ~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----~~~~~~~~~l-~~~~~~~s~G  342 (392)
T 3qhx_A          268 RHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----TAAEQLCAKT-NIFILAESLG  342 (392)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----HHHHHHHHHC-SSSEECSCCC
T ss_pred             HHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----HHHHHHHHhC-CCceECCCCC
Confidence            66777778888888766543222221                2556778886310    1234444444 5667777777


Q ss_pred             CCCC--------------------CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          382 IYVG--------------------LKNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       382 ~~~~--------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      +.+.                    .++.+|||++..  +.++.++.|.+++
T Consensus       343 ~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e--~~~~~i~~l~~al  391 (392)
T 3qhx_A          343 SVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIE--DVADLLDDLKQAL  391 (392)
T ss_dssp             CSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSS--CHHHHHHHHHHHH
T ss_pred             CCCceeeCcccccccccCHHHcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence            6532                    146799999753  4445555555543

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.96  E-value=7.2e-27  Score=223.22  Aligned_cols=284  Identities=13%  Similarity=0.109  Sum_probs=201.0

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~  160 (419)
                      ...++|+.+++++      +.. +.|++++| +++++.++.+++++||+|+++.|+|.++..    .+...|.++..++.
T Consensus       115 ~~~~l~~~lA~l~------g~~-~~v~~~sG-~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~  186 (445)
T 1qgn_A          115 TTVVLEEKISALE------GAE-STLLMASG-MCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP  186 (445)
T ss_dssp             HHHHHHHHHHHHH------TCS-EEEEESCH-HHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred             HHHHHHHHHHHHh------CCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence            4458999999987      332 45555555 599999999999999999999999987655    35667999888864


Q ss_pred             cCCCCcccChHHHHHhhcCCc-cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          161 LPERNWEVDLDAVEALADKNT-AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      +       |++.+++++++++ ++|++++|+||||.+.+   +++|.++|+++|+++|+|++|......    .++ .++
T Consensus       187 ~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~-~~g  251 (445)
T 1qgn_A          187 A-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-ALG  251 (445)
T ss_dssp             S-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TTT
T ss_pred             C-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-ccC
Confidence            2       7899999998888 99999999999999998   889999999999999999999864321    111 222


Q ss_pred             CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                         ..+++.|+||.++..| .++||+++++        ++++.+...... ....++...+++...++.     +..+.+
T Consensus       252 ---~Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~  315 (445)
T 1qgn_A          252 ---ADLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQ  315 (445)
T ss_dssp             ---CSEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred             ---CEEEEECCcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHHHH
Confidence               3488999999987665 4799999864        567777655432 233455444444444443     444455


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769          318 TLRESAEICYDGVKEIPCISCPNKP----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG  381 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g  381 (419)
                      +..++++.+.+.|+++|++..+..|                ..|.++++.++...    .+...++..+ +..++.++.|
T Consensus       316 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~----~~~~~~l~~l-~~~~i~~s~G  390 (445)
T 1qgn_A          316 QQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL----LTTAKFVDAL-KIPYIAPSFG  390 (445)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH----HHHHHHHHHC-SSSEECSCCC
T ss_pred             HHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH----HHHHHHHHhC-CCceEeccCC
Confidence            6667788888889887765212233                13556677775310    0133444443 3346777777


Q ss_pred             CCC----------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          382 IYV----------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       382 ~~~----------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      +.+                      +. ++.+|+|++.  |+++++++.|++++++
T Consensus       391 ~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~~  444 (445)
T 1qgn_A          391 GCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALDS  444 (445)
T ss_dssp             SSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred             CCceeeecccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence            643                      22 4799999994  5789999999988864

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.96  E-value=2e-27  Score=223.47  Aligned_cols=305  Identities=17%  Similarity=0.191  Sum_probs=219.0

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEee
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLP  137 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~  137 (419)
                      +.++++.+++.+.+...   .|.+..+..++|+.+++++      +  .+++++++|+++++..++.++ .++||+|+++
T Consensus        13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~------~--~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~   81 (367)
T 3nyt_A           13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFV------G--AKYCISCANGTDALQIVQMALGVGPGDEVITP   81 (367)
T ss_dssp             HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHH------T--CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEEC
Confidence            35678888888887654   3555567899999999998      2  248999999999999999999 8899999999


Q ss_pred             CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769          138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  217 (419)
                      .|+|.++...+...|.+++.++++++ .+.+|++.+++++++++++|+   |+||||...+   +++|.++|+++|+++|
T Consensus        82 ~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li  154 (367)
T 3nyt_A           82 GFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKYGIPVI  154 (367)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBE
T ss_pred             CCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEE
Confidence            99999999999999999999988653 468999999999987776665   8899998888   8899999999999999


Q ss_pred             Eccccccc-ccCCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-------
Q 014769          218 ADEVYGHL-TFGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-------  287 (419)
Q Consensus       218 ~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-------  287 (419)
                      +|++|+.+ .+.+...   ..++    .+++.||  +|.++.+|. .|+++++++       ++.+.++....       
T Consensus       155 ~D~a~~~g~~~~~~~~---~~~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~~-------~l~~~~~~~~~~g~~~~~  219 (367)
T 3nyt_A          155 EDAAQSFGASYKGKRS---CNLS----TVACTSFFPSAPLGCYGD-GGAIFTNDD-------ELATAIRQIARHGQDRRY  219 (367)
T ss_dssp             EECTTTTTCEETTEET---TSSS----SEEEEECCTTSSSCCSSC-CEEEEESCH-------HHHHHHHHHTBTTEEETT
T ss_pred             EECccccCCeECCeec---cCCC----CEEEEECCCCCcCCCcCc-eeEEEeCCH-------HHHHHHHHHHhcCCCcCc
Confidence            99999853 3333221   1222    2777887  899876576 888888652       46666665432       


Q ss_pred             ------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce----EEEEeecCcccc
Q 014769          288 ------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS----MVTMVKLNPWLL  357 (419)
Q Consensus       288 ------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g----~~~~~~~~~~~~  357 (419)
                            .++..+.....++...++.     +++..++.+++.+.+.+.|+++ ++.....+.++    ..+.+.++    
T Consensus       220 ~~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~----  289 (367)
T 3nyt_A          220 HHIRVGVNSRLDTLQAAILLPKLEI-----FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD----  289 (367)
T ss_dssp             EECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS----
T ss_pred             eeeccCcCCCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC----
Confidence                  1233455544444444432     4555666677778888888876 44422222222    12233332    


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCC--------CC-C-----------CCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIY--------VG-L-----------KNWLRIAFC--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~--------~~-~-----------~~~~Ris~~--~~~~~l~~~l~~l~~~  411 (419)
                          +..++...| +++||.+.++..        |. .           ...+|+++.  .++++++.+++.|++.
T Consensus       290 ----~~~~l~~~L-~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          290 ----NRESVQASL-KAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             ----SHHHHHHHH-HHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             ----CHHHHHHHH-HHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence                355666665 667999887653        11 0           247899984  6899999999988764

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.96  E-value=7.4e-27  Score=216.47  Aligned_cols=277  Identities=14%  Similarity=0.089  Sum_probs=192.5

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCC
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPE  163 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~  163 (419)
                      ++++.+++++      +.+ +.+++++ +++++..++.++.++||+|+++.|+|+++...+    ...|.++..++.   
T Consensus         2 ~l~~~la~~~------g~~-~~i~~~s-G~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---   70 (331)
T 1pff_A            2 ALEGKIAKLE------HAE-ACAATAS-GMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHH------TCS-EEEEESS-HHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             hHHHHHHHHh------CCC-eEEEeCC-hHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence            6899999998      333 4455555 589999999999999999999999999876554    457888888764   


Q ss_pred             CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh-CCCeEEEcccccccccCCCCCCCccccCCCC
Q 014769          164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK-LRVMVVADEVYGHLTFGSIPYTPMGLFGSIV  242 (419)
Q Consensus       164 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  242 (419)
                          .|++.+++.+++++++|++++|+||||.+++   +++|.++|++ +|+++|+|++|+.+.+.    .++ .   .+
T Consensus        71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~---~~  135 (331)
T 1pff_A           71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-D---LG  135 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-G---GT
T ss_pred             ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-h---cC
Confidence                3788999999888899999999999999998   9999999999 99999999999875542    122 2   23


Q ss_pred             cEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769          243 PVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTL  319 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  319 (419)
                      ..+++.|+||.++++|.| +||+++++       +++++.++.....  +.+.++..+.++...++.     .....+..
T Consensus       136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~  203 (331)
T 1pff_A          136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA  203 (331)
T ss_dssp             CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred             CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence            458999999999999999 79998864       1477777766543  345677777666555543     22223333


Q ss_pred             HHHHHHHHHHhhcC--------------CCCCCCC--CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769          320 RESAEICYDGVKEI--------------PCISCPN--KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY  383 (419)
Q Consensus       320 ~~~~~~l~~~l~~~--------------~~~~~~~--~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~  383 (419)
                      .++.+.+.+.+++.              |++.++.  ....+.++.+.++        +..++ .+++.++||.+.+.+.
T Consensus       204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~l~~~gI~~~~~s~  274 (331)
T 1pff_A          204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEKA-KKVLDNCHVVSLAVSL  274 (331)
T ss_dssp             HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHHH-HHHHHTCSSSEECSSC
T ss_pred             HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHHH-HHHHHhCCCceeccCC
Confidence            34444444444322              1221100  0113445566664        23444 4556788997765421


Q ss_pred             -------------------------CCC-CCeEEEEeec--CHHHHHHHHHHHHHH
Q 014769          384 -------------------------VGL-KNWLRIAFCA--EPSALKDGLGRMKAF  411 (419)
Q Consensus       384 -------------------------~~~-~~~~Ris~~~--~~~~l~~~l~~l~~~  411 (419)
                                               ++. ++++|++++.  ++++++.+++.|+++
T Consensus       275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~  330 (331)
T 1pff_A          275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV  330 (331)
T ss_dssp             CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred             CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence                                     122 5799999964  567888877777643

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.96  E-value=1.2e-26  Score=219.73  Aligned_cols=281  Identities=16%  Similarity=0.111  Sum_probs=198.0

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~  159 (419)
                      ....++++.+++++      +.  +++++++++++++..++.++.++||+|+++.|+|.++...    ++..|.++..++
T Consensus        59 ~~~~~l~~~la~~~------g~--~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~  130 (389)
T 3acz_A           59 PTVEQFEEMVCSIE------GA--AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID  130 (389)
T ss_dssp             HHHHHHHHHHHHHH------TC--SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             hHHHHHHHHHHHHh------CC--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence            45678999999988      33  2666777788999999999999999999999999976554    577899988887


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      .       .|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+.    .++. + 
T Consensus       131 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~----~~~~-~-  194 (389)
T 3acz_A          131 T-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL----KPLE-L-  194 (389)
T ss_dssp             T-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGGG-T-
T ss_pred             C-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc----Cccc-c-
Confidence            5       3789999999888999999999999999998   899999999999999999999876432    1221 2 


Q ss_pred             CCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLID  317 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  317 (419)
                        +..+++.|+||.++.+|.|+ ||++++++       ++++.++.... ...+.++..+.++...++.     +....+
T Consensus       195 --~~di~~~S~sK~~~~~~~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~~  260 (389)
T 3acz_A          195 --GADIALHSVSKYINGHGDVIGGVSSAKTA-------EDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIRMQ  260 (389)
T ss_dssp             --TCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred             --CCeEEEECChhhccCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHHHH
Confidence              34588999999999999998 99998641       36666665543 3344566666666666653     223334


Q ss_pred             HHHHHHHHHHHHhhcCC--------CCCCC-----CC---CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec-
Q 014769          318 TLRESAEICYDGVKEIP--------CISCP-----NK---PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-  380 (419)
Q Consensus       318 ~~~~~~~~l~~~l~~~~--------~~~~~-----~~---p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-  380 (419)
                      +..++...+.+.|++++        ++...     ..   ...|.++.+.++        + .+...+++.+.|+.+.+ 
T Consensus       261 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------~-~~~~~~~l~~~~i~~~~~  331 (389)
T 3acz_A          261 IHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------S-FEAAKKLMEHLKVCTLAV  331 (389)
T ss_dssp             HHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------S-HHHHHHHHTTCSSSEEBS
T ss_pred             HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------C-HHHHHHHHHhCCCcEECc
Confidence            44455555555555432        22100     00   112445556664        2 23345666778988766 


Q ss_pred             --C------CCC----------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          381 --G------IYV----------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       381 --g------~~~----------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                        |      ..+                +. ++++|+|++..  +.++.++.|.++++
T Consensus       332 s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~  387 (389)
T 3acz_A          332 SLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE  387 (389)
T ss_dssp             CCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred             CCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence              3      111                11 47999999864  56667777777664

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.96  E-value=3.7e-26  Score=218.03  Aligned_cols=309  Identities=18%  Similarity=0.163  Sum_probs=211.4

Q ss_pred             CCCChHHHHHHHHHHHhCCCCCCCCCC--CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769           57 CFRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV  134 (419)
Q Consensus        57 ~~~~~~~v~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~v  134 (419)
                      .++.++.+.+++.   ... ...|+..  ....++++.+++++      +  .+++++++|++++++.++.++.++||+|
T Consensus        31 ~~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~------g--~~~~~~~~~gt~a~~~al~~l~~~gd~v   98 (412)
T 2cb1_A           31 GFKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALE------G--ALEAVVLASGQAATFAALLALLRPGDEV   98 (412)
T ss_dssp             CCSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHH------T--CSEEEEESSHHHHHHHHHHTTCCTTCEE
T ss_pred             ecCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEE
Confidence            3566666666653   222 2356643  45678999999987      2  2489999999999999999999999999


Q ss_pred             EeeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769          135 LLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR  210 (419)
Q Consensus       135 lv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~  210 (419)
                      +++.|+|.+....    +...|.+++.++.        |++++++++++++++|++++|+||||.+.+   +++|.++|+
T Consensus        99 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~  167 (412)
T 2cb1_A           99 VAAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAE  167 (412)
T ss_dssp             EEETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred             EEeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHH
Confidence            9999999865443    4457888888764        388999999888999999999999999998   999999999


Q ss_pred             hCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc------c-----------
Q 014769          211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI------F-----------  273 (419)
Q Consensus       211 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~------~-----------  273 (419)
                      ++|+++|+|++|+.+.+..   .+. .   .+..+++.|+||.++.+|.|+|++++.++...      +           
T Consensus       168 ~~~~~li~D~~~~~~~~~~---~~~-~---~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~  240 (412)
T 2cb1_A          168 EAGVALVVDNTFGAAGALC---RPL-A---WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW  240 (412)
T ss_dssp             HHTCEEEEECGGGTTTTSC---CGG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------H
T ss_pred             HcCCEEEEECCCccccccC---Ccc-c---cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchh
Confidence            9999999999998752211   111 1   23458899999999899999999988763310      0           


Q ss_pred             ---chhhHHHHHHhhh-cc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC------
Q 014769          274 ---QKSGIIDSIKDCL-SI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP------  342 (419)
Q Consensus       274 ---~~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p------  342 (419)
                         ...++.+.++... .. ....++.....+...++.     +....++..++.+.+.+.|.+.+++..+..|      
T Consensus       241 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p  315 (412)
T 2cb1_A          241 EALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDP  315 (412)
T ss_dssp             HHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCT
T ss_pred             hccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCc
Confidence               0003445555433 21 122233333333333332     3455556677888889999888777633222      


Q ss_pred             ----------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC---------CCC----------------C-
Q 014769          343 ----------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI---------YVG----------------L-  386 (419)
Q Consensus       343 ----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~---------~~~----------------~-  386 (419)
                                ..+.++.+.+ .       +... +..++.+.||.+ .++         .+.                . 
T Consensus       316 ~~~~~~~~~~~~~~iv~~~~-~-------~~~~-~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~  385 (412)
T 2cb1_A          316 AHRNARKYLASGGPILTLDL-G-------DLER-ASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVT  385 (412)
T ss_dssp             THHHHHHHCSSSCSEEEEEC-S-------SHHH-HHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCC
T ss_pred             cHHHHHHhCCCCceEEEEEe-C-------CHHH-HHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCC
Confidence                      2344555656 2       2333 345557789998 663         121                0 


Q ss_pred             CCeEEEEeec--CHHHHHHHHHHHHH
Q 014769          387 KNWLRIAFCA--EPSALKDGLGRMKA  410 (419)
Q Consensus       387 ~~~~Ris~~~--~~~~l~~~l~~l~~  410 (419)
                      ++.+|+|++.  ++++++.+++.|++
T Consensus       386 ~~~iR~s~g~~~~~~~i~~l~~al~~  411 (412)
T 2cb1_A          386 PGLVRVSVGLEDPLDLLALFEEALEA  411 (412)
T ss_dssp             TTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred             CCeEEEEeccCCHHHHHHHHHHHHhh
Confidence            5789999964  56777777776653

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.96  E-value=4.1e-26  Score=223.38  Aligned_cols=318  Identities=12%  Similarity=0.030  Sum_probs=223.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--------CC-----C-eEEeeCCCCCC
Q 014769           78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--------PG-----A-NVLLPRPGWPY  143 (419)
Q Consensus        78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--------~g-----d-~vlv~~p~~~~  143 (419)
                      ..|....+..++++.+.+++.+.+|.+.+++++++|+|+++++..++.++..        +|     + .|+++.++|+.
T Consensus       122 ~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s  201 (504)
T 2okj_A          122 FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS  201 (504)
T ss_dssp             SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred             CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH
Confidence            3566555667788888888888777654478999999999999999988753        56     6 78899999999


Q ss_pred             cHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769          144 YEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV  214 (419)
Q Consensus       144 ~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  214 (419)
                      +...+...|.   +++.++++  .++.+|+++|++++++      ++++|++++|+||||.+.+   +++|.++|+++|+
T Consensus       202 ~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~  276 (504)
T 2okj_A          202 IKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNL  276 (504)
T ss_dssp             HHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCC
Confidence            9888888877   78888864  3578999999998865      4788899999999999988   8999999999999


Q ss_pred             eEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH-hhhccc--c
Q 014769          215 MVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK-DCLSIY--S  290 (419)
Q Consensus       215 ~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~-~~~~~~--~  290 (419)
                      ++++|++|+.+.+..... ..+..+.  ...+++.+++|+++.| .++|++++++++       +.+... ....+.  .
T Consensus       277 ~lhvD~a~~~~~~~~~~~~~~~~g~~--~~D~i~~~~hK~~~~p-~~~g~l~~~~~~-------~~~~~~~~~~~~l~~~  346 (504)
T 2okj_A          277 WLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG-------ILQGCNQMCAGYLFQP  346 (504)
T ss_dssp             EEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT-------HHHHHHCCCCSSSCCS
T ss_pred             EEEEehhhhhHHHhCHhhHhhcCCcc--cCCEEEECchhhcCCC-cceEEEEEECHH-------HHHHHhcCCCccccCC
Confidence            999999999876543222 1222111  1126677899996655 689999997632       333211 111110  0


Q ss_pred             -------------------CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC--CCCceEEEE
Q 014769          291 -------------------DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN--KPEGSMVTM  349 (419)
Q Consensus       291 -------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~p~~g~~~~  349 (419)
                                         ....+.++++..++.   .+.++++.++..++++++.+.|+++|+++++.  .|..+++++
T Consensus       347 ~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f  423 (504)
T 2okj_A          347 DKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCF  423 (504)
T ss_dssp             CCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEE
T ss_pred             cccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEE
Confidence                               012445555555554   36688888999999999999999988888543  377777766


Q ss_pred             eecCcccccCCC-----------CHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEee---cCHHHHHHHHHHHHHHHHH
Q 014769          350 VKLNPWLLEDIN-----------DDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFC---AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       350 ~~~~~~~~~~~~-----------~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~---~~~~~l~~~l~~l~~~~~~  414 (419)
                      ...+... .+..           ...++...|. +.|+.+..+..+.. .+++|++++   +++++++++++.|++++++
T Consensus       424 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~  501 (504)
T 2okj_A          424 WYIPQSL-RGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD  501 (504)
T ss_dssp             EECCGGG-SSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred             EEeCccc-cccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            5444310 0000           0235666664 45754333222322 368999996   6899999999999998765


Q ss_pred             H
Q 014769          415 H  415 (419)
Q Consensus       415 ~  415 (419)
                      +
T Consensus       502 ~  502 (504)
T 2okj_A          502 L  502 (504)
T ss_dssp             -
T ss_pred             H
Confidence            4

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.96  E-value=9.4e-27  Score=221.08  Aligned_cols=286  Identities=14%  Similarity=0.107  Sum_probs=193.0

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCC
Q 014769           78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQV  153 (419)
Q Consensus        78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~  153 (419)
                      ..|++ .+..++|+++++++.      .. +.|++++| ++++..++. ++++||+|++++|+|.+...    .++..|.
T Consensus        62 ~r~~~-p~~~~l~~~la~~~g------~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~  131 (403)
T 3cog_A           62 SRSGN-PTRNCLEKAVAALDG------AK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGL  131 (403)
T ss_dssp             ----C-HHHHHHHHHHHHHHT------CS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred             cCCCC-chHHHHHHHHHHHhC------CC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence            34554 467899999999983      22 56666665 699999999 88999999999999987433    3466799


Q ss_pred             EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC-CeEEEcccccccccCCCCC
Q 014769          154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR-VMVVADEVYGHLTFGSIPY  232 (419)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~  232 (419)
                      ++..++++       |++.+++++++++++|++++|+||||.+++   +++|.++|+++| +++|+|++|..+.+.    
T Consensus       132 ~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~----  197 (403)
T 3cog_A          132 KISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ----  197 (403)
T ss_dssp             EEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC----
T ss_pred             EEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC----
Confidence            99888753       789999999888999999999999999998   999999999999 999999999986542    


Q ss_pred             CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchH
Q 014769          233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .++. +   +..+++.|+||.++.+| .++||++++++       ++++.++.... .....++..+.++...++.    
T Consensus       198 ~~~~-~---~~div~~S~sK~~~g~~~~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----  262 (403)
T 3cog_A          198 RPLA-L---GADISMYSATKYMNGHSDVVMGLVSVNCE-------SLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT----  262 (403)
T ss_dssp             CTTT-T---TCSEEEEETTTTTTCSSCCCCEEEEECCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----
T ss_pred             Cccc-c---CCeEEEEcChhhccCCCCCeEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----
Confidence            1221 2   34589999999988776 57999998642       56777765543 3445677777777777764    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcC--------------CCCCCCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHH
Q 014769          311 FFCKLIDTLRESAEICYDGVKEI--------------PCISCPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAK  372 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~  372 (419)
                       +....++..++...+.+.|++.              |++.+. .+    .++++.| .++.       .. +...+++.
T Consensus       263 -l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~~~~~~~g~~~~~-~l~~-------~~-~~~~~~l~  331 (403)
T 3cog_A          263 -LHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELV-KRQCTGCTGMVTF-YIKG-------TL-QHAEIFLK  331 (403)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-HHHCSCCCSEEEE-EESS-------CH-HHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHH-HhcCCCCceEEEE-EecC-------CH-HHHHHHHH
Confidence             2223333344444444444332              233211 11    2565555 5642       12 33455567


Q ss_pred             hcCeEeec---CC----------CC------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769          373 EESVIVTP---GI----------YV------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       373 ~~gv~v~~---g~----------~~------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +.+|.+..   |+          .+            +. ++++|||++.  ++.++.++.|.+++++.
T Consensus       332 ~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~d~i~~l~~al~~~  398 (403)
T 3cog_A          332 NLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL--EDEEDLLEDLDQALKAA  398 (403)
T ss_dssp             HCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred             hCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHHHh
Confidence            77885432   21          11            22 5799999976  23344555666665544

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.95  E-value=8.3e-26  Score=214.50  Aligned_cols=311  Identities=12%  Similarity=0.107  Sum_probs=214.4

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCC--CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEee
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSG--IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLP  137 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~  137 (419)
                      ++++.+++.+.+..    .|.++.|  ..++|+++++++      +  .++|++++|+++++..++.++ .++||+|+++
T Consensus        11 ~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~------~--~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~   78 (394)
T 1o69_A           11 GGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYS------K--SENALALNSATAALHLALRVAGVKQDDIVLAS   78 (394)
T ss_dssp             -CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHH------C--CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             CHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence            46677888887764    3555567  899999999998      2  268999999999999999999 8999999999


Q ss_pred             CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769          138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV  214 (419)
Q Consensus       138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  214 (419)
                      .|+|+++...+...|.+++.++++  .++.+|++.+++++++   ++++|++++   |||...+   +++|.++|+++|+
T Consensus        79 ~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~  150 (394)
T 1o69_A           79 SFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKENDI  150 (394)
T ss_dssp             SSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTC
T ss_pred             CCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcCC
Confidence            999999999999999999999876  4567999999998876   688888875   8998777   8999999999999


Q ss_pred             eEEEccccc-ccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcccc-C-
Q 014769          215 MVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYS-D-  291 (419)
Q Consensus       215 ~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-  291 (419)
                      ++|+|++|+ ++.+.+....   .+.  .  +.+.|+||..+++|.++||++++++       ++++.++....... . 
T Consensus       151 ~li~Dea~~~g~~~~~~~~~---~~~--~--~~~~s~s~~K~l~~~~~G~~~~~~~-------~l~~~l~~~~~~~~~~~  216 (394)
T 1o69_A          151 VLIEDAAEALGSFYKNKALG---TFG--E--FGVYSYNGNKIITTSGGGMLIGKNK-------EKIEKARFYSTQARENC  216 (394)
T ss_dssp             EEEEECTTCTTCEETTEETT---SSS--S--EEEEECCTTSSSCCSSCEEEEESCH-------HHHHHHHHHTBTCCCSS
T ss_pred             EEEEECcCcccceeCCcccc---ccc--C--cEEEEEeCCccCCCCCceEEEECCH-------HHHHHHHHHHHhccccC
Confidence            999999999 4555432211   111  1  4455664443456779999999632       56677665432110 0 


Q ss_pred             -------------CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceE-EEEeecC
Q 014769          292 -------------IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSM-VTMVKLN  353 (419)
Q Consensus       292 -------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~-~~~~~~~  353 (419)
                                   .+.....++...+     +++++..++++++++.+.+.|+++  +... .+.    +++ ++++.++
T Consensus       217 ~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~i~~~  288 (394)
T 1o69_A          217 LHYEHLDYGYNYRLSNVLGAIGVAQM-----EVLEQRVLKKREIYEWYKEFLGEY--FSFL-DELENSRSNRWLSTALIN  288 (394)
T ss_dssp             SSCCCSSCCCBCBCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTT--EECC-CCCTTEECCCSSEEEEES
T ss_pred             ccccccccCcccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccc--cccc-CCCCCCcceeEEEEEEec
Confidence                         1112221211112     346667788889999999999875  4422 221    232 3556665


Q ss_pred             ccc-------------ccC---CCCHHHHHHHHHHhcCeEeecCCCCC-----CC---------------CeEEEEe--e
Q 014769          354 PWL-------------LED---INDDIEFALKLAKEESVIVTPGIYVG-----LK---------------NWLRIAF--C  395 (419)
Q Consensus       354 ~~~-------------~~~---~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~---------------~~~Ris~--~  395 (419)
                      ...             ..+   ..+..++...| .++||.+.+|..+.     ..               ..+|+.+  .
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (394)
T 1o69_A          289 FDKNELNACQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTA  367 (394)
T ss_dssp             CCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTT
T ss_pred             chhhccccccccccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCC
Confidence            210             000   00245566666 66899999885320     01               2344444  2


Q ss_pred             cCHHHHHHHHHHHHHHHHH
Q 014769          396 AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       396 ~~~~~l~~~l~~l~~~~~~  414 (419)
                      .++++++.+++.|++++..
T Consensus       368 ~t~edi~~~~~~l~~~~~~  386 (394)
T 1o69_A          368 MSKDDVYEISKLILKSIKA  386 (394)
T ss_dssp             CCHHHHHHHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            6899999999999988754

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.95  E-value=8.6e-27  Score=220.70  Aligned_cols=283  Identities=17%  Similarity=0.093  Sum_probs=193.3

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEe
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFD  159 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~  159 (419)
                      .+..++|+++++++      +.+  +++++++++++++.++. ++++||+|+++.|+|++...    .++..|.++..++
T Consensus        55 ~~~~~lr~~la~~~------g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~  125 (393)
T 1n8p_A           55 PNRENLERAVAALE------NAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN  125 (393)
T ss_dssp             HHHHHHHHHHHHHT------TCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred             hhHHHHHHHHHHHh------CCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence            45679999999997      222  55555666999999999 88999999999999985433    4566788888887


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC----CCeEEEcccccccccCCCCCCCc
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL----RVMVVADEVYGHLTFGSIPYTPM  235 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~De~~~~~~~~~~~~~~~  235 (419)
                      ++       | +++++++++++++|++++|+||||.+++   +++|.++|+++    |+++|+|++|+.+.+.  .   .
T Consensus       126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~---~  189 (393)
T 1n8p_A          126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--N---P  189 (393)
T ss_dssp             SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C---G
T ss_pred             CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--C---H
Confidence            53       6 8899999888999999999999999998   89999999999    9999999999987653  1   1


Q ss_pred             cccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHH
Q 014769          236 GLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       236 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      ..+   +..+++.|+||.++.+|+|+ ||++++++       ++++.++.... .....++....++...++.     +.
T Consensus       190 ~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----~~  254 (393)
T 1n8p_A          190 LNF---GADIVVHSATKYINGHSDVVLGVLATNNK-------PLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LH  254 (393)
T ss_dssp             GGG---TCSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HH
T ss_pred             HHc---CCeEEEEECcccccCCCCceeEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----HH
Confidence            122   24588999999999999999 99988531       46666665533 2334455555555555543     44


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCC-CCCCCCC----------------C-c-eEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769          314 KLIDTLRESAEICYDGVKEIPC-ISCPNKP----------------E-G-SMVTMVKLNPWLLEDINDDIEFALKLAKEE  374 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p----------------~-~-g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  374 (419)
                      ...++..++...+.+.|.+.+. +..+..|                . . |.++++.++...    .+...++..+ +..
T Consensus       255 ~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----~~~~~~l~~l-~~~  329 (393)
T 1n8p_A          255 LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----EAASKFASST-RLF  329 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----HHHHHHHHHC-SSS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----HHHHHHHhhC-Ccc
Confidence            4455566667777777776543 2211111                1 2 556777776310    1233444433 334


Q ss_pred             CeEeecCC----------CC------------CC-CCeEEEEeec--CHHHHHHHHHHHHHH
Q 014769          375 SVIVTPGI----------YV------------GL-KNWLRIAFCA--EPSALKDGLGRMKAF  411 (419)
Q Consensus       375 gv~v~~g~----------~~------------~~-~~~~Ris~~~--~~~~l~~~l~~l~~~  411 (419)
                      ++.++.|+          .+            +. ++.+|+|++.  ++++++.+.+.|+++
T Consensus       330 ~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~  391 (393)
T 1n8p_A          330 TLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             EECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             eECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence            55544442          11            11 4789999974  456666666666543

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.95  E-value=5.4e-26  Score=222.16  Aligned_cols=336  Identities=13%  Similarity=0.076  Sum_probs=228.9

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh----c------
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL----A------  128 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l----~------  128 (419)
                      +.++.+.+++.....+.....|....+..++++.+.+++.+.+|.+ ..+++++|+|+++++..++.++    .      
T Consensus       111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~  189 (497)
T 2qma_A          111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH  189 (497)
T ss_dssp             CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence            5678887777665544444455554566788888888888877754 3478999999999999988873    2      


Q ss_pred             ---CC------CC-eEEeeCCCCCCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcCC----cc--EEEEeCC
Q 014769          129 ---RP------GA-NVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADKN----TA--AMVIINP  189 (419)
Q Consensus       129 ---~~------gd-~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~--~v~i~~p  189 (419)
                         .+      |+ .|+++.++|+++...+...|.   +++.++++  .++.+|+++|+++++++    ++  +|+++.+
T Consensus       190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~  267 (497)
T 2qma_A          190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG  267 (497)
T ss_dssp             CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence               12      46 789999999998888888876   68888874  35789999999988653    33  7788899


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP  269 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  269 (419)
                      +||||...+   +++|.++|+++|+++++|++|+.+.+.......+..+.  ...+++.|+||+++.| .++|+++++++
T Consensus       268 ~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~~~~~  341 (497)
T 2qma_A          268 TTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALLVNDK  341 (497)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEEESCG
T ss_pred             CCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcc--cCCEEEEcchhccCCC-cceEEEEEeCH
Confidence            999999888   89999999999999999999998765432111111221  1226677899986655 69999998764


Q ss_pred             CCccchhhHHHHHHhhhcc---cc--CC-------------chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          270 NGIFQKSGIIDSIKDCLSI---YS--DI-------------PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       270 ~~~~~~~~~~~~l~~~~~~---~~--~~-------------~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      ..       ++.+.....+   ..  .+             ..+.++++...+   ..+.++++.+++.++++++.+.|+
T Consensus       342 ~~-------~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~  411 (497)
T 2qma_A          342 SN-------FKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV---GPKALGDMYDHLLAQTLEVADMIR  411 (497)
T ss_dssp             GG-------GGGGCC--------------------CCSCCCTHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HH-------HHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHh
Confidence            21       1111100000   00  01             122233333333   356788888999999999999999


Q ss_pred             cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe---ecCHHHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF---CAEPSALKDGLGRM  408 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~---~~~~~~l~~~l~~l  408 (419)
                      ++++++++..|..+ ++++++.........-..++...+ .+.|+.+.++..+....++|+++   .+++++++++++.|
T Consensus       412 ~~~~~~~~~~~~~~-~v~f~~~~~~~~~~~l~~~l~~~l-~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l  489 (497)
T 2qma_A          412 TNDQFELLAEPSLS-TVLFRATHETADLDELNKALRLEA-LTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKI  489 (497)
T ss_dssp             TCTTEEECSCCSSS-EEEEEECCSSSCHHHHHHHHHHHH-HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred             hCCCeEEEcCCCce-EEEEEEcCCccCHHHHHHHHHHHH-HhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHH
Confidence            98888754456655 555566431100000012444555 55698887655554457899998   36899999999999


Q ss_pred             HHHHHHH
Q 014769          409 KAFCQRH  415 (419)
Q Consensus       409 ~~~~~~~  415 (419)
                      +++++++
T Consensus       490 ~~~~~~~  496 (497)
T 2qma_A          490 NMLAVEL  496 (497)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhh
Confidence            9988764

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.95  E-value=2.7e-26  Score=223.80  Aligned_cols=335  Identities=11%  Similarity=0.053  Sum_probs=231.8

Q ss_pred             ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-------CCcEEEcccHHHHHHHHHHHhcCC--
Q 014769           60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-------ADDVYVTLGCKQAVEVILSVLARP--  130 (419)
Q Consensus        60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~t~g~~~al~~~~~~l~~~--  130 (419)
                      ++..+.+.+...+.. ....|....+..++++.+++++.+.+|.+..       ..++++|+|+|+++..++.++..+  
T Consensus        86 ~~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~  164 (486)
T 1js3_A           86 YPAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV  164 (486)
T ss_dssp             HHHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHh
Confidence            344566677666643 3345666666789999999999998887642       357899999999999988776431  


Q ss_pred             -------CC--------e--EEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCcc------EEEEe
Q 014769          131 -------GA--------N--VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA------AMVII  187 (419)
Q Consensus       131 -------gd--------~--vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~v~i~  187 (419)
                             ||        .  |+++.++|+.+...++..|++++.++++  .++.+|+++|+++++++++      +|+++
T Consensus       165 ~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~  242 (486)
T 1js3_A          165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT  242 (486)
T ss_dssp             HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEe
Confidence                   43        3  7889999999999999999999999874  4678999999999876553      78889


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      +|+||||.+-+   +++|.++|+++|+++++|++|+.+.+....... +..+.. .. .++.++||.++.| +++|++++
T Consensus       243 ~~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~-ad-si~~~~hK~~~~p-~~~G~l~~  316 (486)
T 1js3_A          243 LGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF-AD-SFNFNPHKWLLVN-FDCSAMWV  316 (486)
T ss_dssp             BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG-CS-EEEECHHHHSSCC-SSCEEEEE
T ss_pred             CCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc-cC-eeEEchhhhcCCC-cceEEEEE
Confidence            99999999877   999999999999999999999976543221111 111111 12 4456889996655 88999999


Q ss_pred             eCCCCccchhhHHHHHHh---hh-c-----------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769          267 NDPNGIFQKSGIIDSIKD---CL-S-----------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI  325 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~---~~-~-----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  325 (419)
                      +++..      +.+.+..   +. .                 .+.....+.+.++...+.   .+.++++.++..+++++
T Consensus       317 ~~~~~------l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g---~~g~~~~~~~~~~~a~~  387 (486)
T 1js3_A          317 KRRTD------LTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG---VKGLQAYIRKHVQLSHE  387 (486)
T ss_dssp             SCHHH------HHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred             eCHHH------HHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHH
Confidence            76310      1121110   00 0                 000112344444444442   46788889999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHH
Q 014769          326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALK  402 (419)
Q Consensus       326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~  402 (419)
                      +.+.|+++|+++++..|..+++.| +++...    ....++..+|.+ .|+.+.++..+....++|++++   +++++++
T Consensus       388 l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~----~~~~~l~~~L~~-~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~  461 (486)
T 1js3_A          388 FEAFVLQDPRFEVCAEVTLGLVCF-RLKGSD----GLNEALLERINS-ARKIHLVPCRLRGQFVLRFAICSRKVESGHVR  461 (486)
T ss_dssp             HHHHHHHCTTEEECSCCCSSEEEE-EESSCH----HHHHHHHHHHHH-HTSCBCEEEEETTEEEEEEECCCTTCCHHHHH
T ss_pred             HHHHHhcCCCeEEeCCCceeEEEE-EecChH----HHHHHHHHHHHh-cCCEEEEEEEECCEEEEEEEeCCCCCCHHHHH
Confidence            999999988888554566665544 454210    014567777754 4654433333444679999983   4789999


Q ss_pred             HHHHHHHHHHHHHhcc
Q 014769          403 DGLGRMKAFCQRHTKK  418 (419)
Q Consensus       403 ~~l~~l~~~~~~~~~~  418 (419)
                      +++++|+++++++.++
T Consensus       462 ~~~~~l~~~~~~~~~~  477 (486)
T 1js3_A          462 LAWEHIRGLAAELLAA  477 (486)
T ss_dssp             HHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999877543

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.95  E-value=5.5e-26  Score=214.54  Aligned_cols=299  Identities=13%  Similarity=0.146  Sum_probs=209.1

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH--HHHhhcCC--EEEEEeccCC
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE--GIAQRKQV--EVRHFDLLPE  163 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~--~~~~~~g~--~~~~~~~~~~  163 (419)
                      ++.+.+++.+.+..|.  + +.|++|+|++++++.++..+ .+||+|++++++|++..  ..+...|.  ++..++.+..
T Consensus        35 ~~~~~~~~~l~~~~~~--~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  110 (379)
T 3ke3_A           35 EVMNDLLSNLKTVYNA--E-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT  110 (379)
T ss_dssp             HHHHHHHHHHHHHHTC--S-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred             HHHHHHHHHHHHHhCC--C-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence            3444444444444443  3 68899999999999988665 58999999999997643  34455553  6677765431


Q ss_pred             ------CC-cccChHHHHHhhc-CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc
Q 014769          164 ------RN-WEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM  235 (419)
Q Consensus       164 ------~~-~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~  235 (419)
                            .. ..+|++.++++++ +++++|++++++||||.++|.+++++|.++|+++|+++|+|++++ .   + ....+
T Consensus       111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~~  185 (379)
T 3ke3_A          111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLDM  185 (379)
T ss_dssp             SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCCH
T ss_pred             ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-ccccc
Confidence                  11 2479999999885 478999999999999999999999999999999999999999986 2   2 12222


Q ss_pred             cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-----------------------ccccCC
Q 014769          236 GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-----------------------SIYSDI  292 (419)
Q Consensus       236 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-----------------------~~~~~~  292 (419)
                      ..++.   .+++.|++|.++. +.++|++++++        ++++.+....                       .+.+++
T Consensus       186 ~~~~~---d~~~~s~~K~l~~-~~g~g~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~  253 (379)
T 3ke3_A          186 KELGI---DVLISAPQKGWSS-TPCAGLVMLSA--------AAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATM  253 (379)
T ss_dssp             HHHTC---SEEEECTTTTTCS-CCCEEEEEECH--------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCC
T ss_pred             cccCC---CEEEecchhhcCC-CCceEEEEECH--------HHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCC
Confidence            22333   3778899998643 34589998865        4555444210                       012366


Q ss_pred             chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHH
Q 014769          293 PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKL  370 (419)
Q Consensus       293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~l  370 (419)
                      +...+.++.++++......+++..++++++++++++.|+++ ++..+..+.  .+....+..+.       ....+. ..
T Consensus       254 ~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~-------~~~~~~-~~  324 (379)
T 3ke3_A          254 PTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER-------DDMHKG-SA  324 (379)
T ss_dssp             CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC-------HHHHSS-HH
T ss_pred             CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC-------cchHHH-HH
Confidence            77777777777765433447788889999999999999987 776442221  22233333321       112223 44


Q ss_pred             HHhcCeEeecCCCCCC-----CCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          371 AKEESVIVTPGIYVGL-----KNWLRIAFC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       371 l~~~gv~v~~g~~~~~-----~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      |.++||.+.+|..+..     .+.+|+++.  .++++|+++++.|+++++++.
T Consensus       325 L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~  377 (379)
T 3ke3_A          325 FAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL  377 (379)
T ss_dssp             HHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             HHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence            5778999999986543     679999994  588999999999999998875

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.95  E-value=6.6e-25  Score=214.48  Aligned_cols=333  Identities=11%  Similarity=0.021  Sum_probs=230.0

Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC------------
Q 014769           62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR------------  129 (419)
Q Consensus        62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~------------  129 (419)
                      ..+.+.+...+.. ....|....+..++++.+++|+.+.+|.+.+++.+++|+|+++++..++.++..            
T Consensus       110 ~~~~e~l~~~~~~-~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~  188 (511)
T 3vp6_A          110 GLAGEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA  188 (511)
T ss_dssp             HHHHHHHHHHHCC-CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred             HHHHHHHHHHhcc-CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence            3344555555543 344787777889999999999999888776678999999999999998887754            


Q ss_pred             --CCCeEEeeCCCCCCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCCCCccccCCC
Q 014769          130 --PGANVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       130 --~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~  198 (419)
                        +++.|+++.++|+++...+...|.   .++.++++  .++.+|+++|+++++++      +++|+++.|+||||.+-+
T Consensus       189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~  266 (511)
T 3vp6_A          189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP  266 (511)
T ss_dssp             GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred             cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence              467899999999999999999998   78888875  35789999999998754      778899999999999977


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                         +++|+++|+++|+++++|++|+.......... .+....  .-.+++.+++|+++.| ..+|+++++++.       
T Consensus       267 ---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~--~aDsv~~~~hK~l~~p-~g~g~l~~~~~~-------  333 (511)
T 3vp6_A          267 ---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG-------  333 (511)
T ss_dssp             ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT-------
T ss_pred             ---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc--cCCEEEECcccccCCC-cCeEEEEEeCHH-------
Confidence               99999999999999999999998654322111 111111  1125667999996655 678999887642       


Q ss_pred             HHHHHHhh-hccc-------------------c--CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          278 IIDSIKDC-LSIY-------------------S--DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       278 ~~~~l~~~-~~~~-------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      +....... ..+.                   .  ........++..++   ..++++++.++..++.+++.+.|+++|+
T Consensus       334 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~---g~~gl~~~~~~~~~~a~~l~~~L~~~pg  410 (511)
T 3vp6_A          334 ILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK---GTVGFENQINKCLELAEYLYAKIKNREE  410 (511)
T ss_dssp             HHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            33332111 1100                   0  01223333333333   3578899999999999999999999889


Q ss_pred             CCCCC--CCCceEEEEeecCcccccCCC-C----------HHHHHHHHHHhcCeEeecCCC-CCCCCeEEEEee---cCH
Q 014769          336 ISCPN--KPEGSMVTMVKLNPWLLEDIN-D----------DIEFALKLAKEESVIVTPGIY-VGLKNWLRIAFC---AEP  398 (419)
Q Consensus       336 ~~~~~--~p~~g~~~~~~~~~~~~~~~~-~----------~~~~~~~ll~~~gv~v~~g~~-~~~~~~~Ris~~---~~~  398 (419)
                      ++++.  .|..+.+.|.-.|.. ..+.. +          ..++..+|.+ +|+.+..... .+..+++|++++   ++.
T Consensus       411 ~~l~~~~~p~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~L~~-~G~~~~~~~~~~~~~~~lRi~~~~~~~t~  488 (511)
T 3vp6_A          411 FEMVFNGEPEHTNVCFWYIPQS-LRGVPDSPQRREKLHKVAPKIKALMME-SGTTMVGYQPQGDKANFFRMVISNPAATQ  488 (511)
T ss_dssp             EEESSSSCCSSSCEEEEECCGG-GSSCCCCHHHHHHHHHHHHHHHHHHHH-HTSCEEEEEEETTEEEEEEECCCCTTCCH
T ss_pred             EEEEecCCCCeEEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHHHHh-cCCEEEEEEEeCCceEEEEEEecCCCCCH
Confidence            88554  366666554333321 11100 0          1245566644 5754433111 112357999983   478


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 014769          399 SALKDGLGRMKAFCQRH  415 (419)
Q Consensus       399 ~~l~~~l~~l~~~~~~~  415 (419)
                      ++|+.+++.|+++-+.+
T Consensus       489 ~di~~ll~~i~~~~~~~  505 (511)
T 3vp6_A          489 SDIDFLIEEIERLGQDL  505 (511)
T ss_dssp             HHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999877654

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.95  E-value=8.1e-26  Score=214.69  Aligned_cols=212  Identities=14%  Similarity=0.105  Sum_probs=156.0

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~  160 (419)
                      ...++++.+|+++      +  .+++++++|+++|++.++.+++++||+|+++.+.|.+....    ++..|+++..++.
T Consensus        83 ~~~~le~~lA~l~------g--~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~  154 (415)
T 2fq6_A           83 THFSLQQAMCELE------G--GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP  154 (415)
T ss_dssp             HHHHHHHHHHHHH------T--CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred             hHHHHHHHHHHHh------C--CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence            4567999999987      2  24677778999999999999999999999999999876543    3557888888764


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCcccc
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                      +       |++++++++++++++|++++|+||||.+.+   +++|.++|++  +|+++|+|++|+.....    .++ .+
T Consensus       155 ~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~~  219 (415)
T 2fq6_A          155 L-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-DF  219 (415)
T ss_dssp             T-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-GG
T ss_pred             C-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-cc
Confidence            2       788999999888999999999999999998   8999999999  99999999999864321    122 22


Q ss_pred             CCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                      +   ..+++.|+||.++.+|.+ .||+++++        ++++.++.... .....++...+++...+     +.+....
T Consensus       220 g---~Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-----~~l~~r~  283 (415)
T 2fq6_A          220 G---IDVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYITSRGL-----RTLGVRL  283 (415)
T ss_dssp             T---CSEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHHHHHH-----HHHHHHH
T ss_pred             C---CeEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----hHHHHHH
Confidence            2   348899999999888865 68988765        24455554432 22233444333333333     2345555


Q ss_pred             HHHHHHHHHHHHHhhcCCC
Q 014769          317 DTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~  335 (419)
                      ++..++...+.+.|++.|.
T Consensus       284 ~~~~~n~~~l~~~L~~~~~  302 (415)
T 2fq6_A          284 RQHHESSLKVAEWLAEHPQ  302 (415)
T ss_dssp             HHHHHHHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHHHHHHHcCCC
Confidence            6667777778888876543

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.95  E-value=1.7e-25  Score=210.57  Aligned_cols=315  Identities=13%  Similarity=0.107  Sum_probs=216.1

Q ss_pred             CCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH-HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCe
Q 014769           56 PCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI-ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGAN  133 (419)
Q Consensus        56 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i-a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~  133 (419)
                      |.++.++.+.+++.+.+..+.+..|++  ...++++++ ++++      + ..+++++++|+++++..++.++ .++||+
T Consensus        10 p~~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~------g-~~~~~v~~~sgt~al~~al~~l~~~~Gd~   80 (377)
T 3ju7_A           10 ASTVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFF------Q-NRGAVTTVANATLGLMAAIQLKKRKKGKY   80 (377)
T ss_dssp             CCCCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTS------T-TCSEEEEESCHHHHHHHHHHHHSCTTCCE
T ss_pred             CCCCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHh------C-CCCeEEEeCCHHHHHHHHHHHcCCCCcCE
Confidence            457788999999999887765433443  468999999 9987      2 2567899999999999999998 899999


Q ss_pred             EEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh-cCC--ccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769          134 VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA-DKN--TAAMVIINPGNPCGNVFTYHHLQEIAEMAR  210 (419)
Q Consensus       134 vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~  210 (419)
                      |+++.|+|..+...+...|.+++.+++++ +++.+|++++++++ +++  +++|+   |+||+|...+   +++|.++|+
T Consensus        81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~  153 (377)
T 3ju7_A           81 ALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK  153 (377)
T ss_dssp             EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH
T ss_pred             EEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh
Confidence            99999999999999999999999999864 46789999999988 555  66655   7789999988   788899999


Q ss_pred             hCCCeEEEccccccccc-CCCCCCCc-cccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh
Q 014769          211 KLRVMVVADEVYGHLTF-GSIPYTPM-GLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL  286 (419)
Q Consensus       211 ~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~  286 (419)
                       +|+++|+|++|+.... .+.   .+ ..+.    .+.+.||  +|.++. | +.|++++++       +++.+.++...
T Consensus       154 -~~~~vi~D~a~a~g~~~~~~---~~g~~~~----d~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~  216 (377)
T 3ju7_A          154 -KGVPVVVDAAPGFGLMNGGM---HYGQDFS----GMIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMG  216 (377)
T ss_dssp             -TTCCBEEECTTCTTCEETTE---ETTTTCS----SEEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHT
T ss_pred             -cCCEEEEECCCccCCeECCE---eccCCCC----cEEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHH
Confidence             9999999999986432 211   11 1111    1445565  588654 4 678888765       25666666553


Q ss_pred             cc-------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce-----EEE
Q 014769          287 SI-------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS-----MVT  348 (419)
Q Consensus       287 ~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g-----~~~  348 (419)
                      ..             ....+.+....+...+     +.++...++.+++++.+.+.|++++++.....+..+     .|+
T Consensus       217 ~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l-----~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~  291 (377)
T 3ju7_A          217 NFGFDTNRECTMMGFNCKMSEYAAAIGIATM-----KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFM  291 (377)
T ss_dssp             BTTBCTTSCBCSSCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSE
T ss_pred             hcCCCCCCceeeccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEE
Confidence            31             1223334333333333     335566667777777888888877554211122221     133


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC--CCC-------------------CCeEEEEee--cCHHHHHHHH
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY--VGL-------------------KNWLRIAFC--AEPSALKDGL  405 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--~~~-------------------~~~~Ris~~--~~~~~l~~~l  405 (419)
                      .+.++..     .+..++...| +++||.+.++..  +..                   ...+||++.  .++++++..+
T Consensus       292 ~~~~~~~-----~~~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~  365 (377)
T 3ju7_A          292 PILCPEE-----VRNKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIV  365 (377)
T ss_dssp             EEECCTT-----SCHHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHH
T ss_pred             EEEeCCh-----hhHHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHH
Confidence            3444421     1356666666 778999877652  110                   247999994  5899999999


Q ss_pred             HHHHHHHHH
Q 014769          406 GRMKAFCQR  414 (419)
Q Consensus       406 ~~l~~~~~~  414 (419)
                      +.|++++..
T Consensus       366 ~~l~~~~~~  374 (377)
T 3ju7_A          366 ICLGQKVVS  374 (377)
T ss_dssp             HHHTC----
T ss_pred             HHHHHHHhc
Confidence            999888765

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.94  E-value=5.1e-25  Score=208.46  Aligned_cols=283  Identities=16%  Similarity=0.106  Sum_probs=195.2

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH-----hhcCCEEEEEe
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA-----QRKQVEVRHFD  159 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~-----~~~g~~~~~~~  159 (419)
                      ...+|++.++++.      +  .+++++++++++|+.. +..++++||+|++++|+|.+....+     ...|.++..++
T Consensus        68 ~~~~l~~~la~l~------g--~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~  138 (400)
T 3nmy_A           68 TRFAYERCVAALE------G--GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD  138 (400)
T ss_dssp             HHHHHHHHHHHHH------T--CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred             HHHHHHHHHHHHh------C--CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence            4567888888876      2  2367777777999998 5667889999999999998654443     34588888876


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                      ..       |++.+++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|....+..    ++ .++
T Consensus       139 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~-~~g  203 (400)
T 3nmy_A          139 LT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR----PL-SLG  203 (400)
T ss_dssp             TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----GG-GGT
T ss_pred             CC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC----hh-hcC
Confidence            52       789999999988999999999999999998   9999999999999999999998543321    11 122


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEE--EEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGW--LVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~--~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                         ..+++.|+||.++.+|.++|.  +++.+       +++.+.++.... .....++...+++...++.     +..+.
T Consensus       204 ---~div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-----l~~r~  268 (400)
T 3nmy_A          204 ---ADLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-----LPLRM  268 (400)
T ss_dssp             ---CSEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             ---CcEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-----HHHHH
Confidence               348899999999888888766  44433       256677765543 3445566665555555543     45566


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec
Q 014769          317 DTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP  380 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  380 (419)
                      ++..++...+.+.|++.|.+..+..|.                .|.++++.++...    .....+++.+ +..++.++.
T Consensus       269 ~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----~~~~~~~~~l-~~~~~~~s~  343 (400)
T 3nmy_A          269 RAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----DAAKRFCEKT-ELFTLAESL  343 (400)
T ss_dssp             HHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----HHHHHHHHHC-SSSEECSCC
T ss_pred             HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----HHHHHHHHcC-CcceEecCC
Confidence            677888888888898876654333332                3667788886310    0123344333 334444455


Q ss_pred             CCCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          381 GIYVG-----------------------LKNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       381 g~~~~-----------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      |..+.                       .++.+|+|++..  +.+++++.|++++.
T Consensus       344 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle--~~~dli~dl~~al~  397 (400)
T 3nmy_A          344 GGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIE--DLGDLRGDLERALV  397 (400)
T ss_dssp             CSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHC
T ss_pred             CCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence            44321                       146899999863  34445566666664

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.94  E-value=6.2e-24  Score=208.32  Aligned_cols=333  Identities=11%  Similarity=0.022  Sum_probs=219.4

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-------C-CCC
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-------R-PGA  132 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-------~-~gd  132 (419)
                      ++.+...+.....+.....|...++..++++.+.+++.+..|.+  ++++++|+|+++++..++.++.       + +|+
T Consensus       121 ~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~  198 (515)
T 2jis_A          121 PHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGL  198 (515)
T ss_dssp             HHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred             HHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence            44444433333333333356655566677777666666655543  7899999999999998888863       2 565


Q ss_pred             ------eEEeeCCCCCCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCC
Q 014769          133 ------NVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       133 ------~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~  197 (419)
                            .|++..++|+.+...+...|.   +++.++++  .++.+|+++|++++++      ++++|++++|+||||.+.
T Consensus       199 ~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~  276 (515)
T 2jis_A          199 RTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD  276 (515)
T ss_dssp             GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC
T ss_pred             cccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc
Confidence                  889999999999888888888   78888875  3568999999998865      378889999999999998


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS  276 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  276 (419)
                      +   +++|.++|+++|+++++|++|+.+......+. .+..+.  ...+++.|++|+++.| .++|+++++++..     
T Consensus       277 ~---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~-----  345 (515)
T 2jis_A          277 P---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTSN-----  345 (515)
T ss_dssp             C---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCSC-----
T ss_pred             C---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChHH-----
Confidence            8   89999999999999999999998766432221 122221  2237778999986544 5799999976411     


Q ss_pred             hHHHHH----Hhhh-c--------cc---c------CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          277 GIIDSI----KDCL-S--------IY---S------DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       277 ~~~~~l----~~~~-~--------~~---~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                       +++..    ..+. .        ..   .      ....+.++++..++.   .+.+++..++..++++++.+.|+++|
T Consensus       346 -~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~  421 (515)
T 2jis_A          346 -LLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKRE  421 (515)
T ss_dssp             -HHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             -HHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence             22221    0000 0        00   0      011333444444443   36688888999999999999999988


Q ss_pred             CCCCCCCCCceEEEEeecCcccccC---CCCH-H-------HHHHHHHHhcCeEeec-CCCCCCCCeEEEEee---cCHH
Q 014769          335 CISCPNKPEGSMVTMVKLNPWLLED---INDD-I-------EFALKLAKEESVIVTP-GIYVGLKNWLRIAFC---AEPS  399 (419)
Q Consensus       335 ~~~~~~~p~~g~~~~~~~~~~~~~~---~~~~-~-------~~~~~ll~~~gv~v~~-g~~~~~~~~~Ris~~---~~~~  399 (419)
                      +++++..|..+.+.+...+.. ..+   ..+. .       .+...+ .+.|+.... ....+..+++|++++   ++++
T Consensus       422 g~~~~~~~~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~l-~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~e  499 (515)
T 2jis_A          422 GFELVMEPEFVNVCFWFVPPS-LRGKQESPDYHERLSKVAPVLKERM-VKEGSMMIGYQPHGTRGNFFRVVVANSALTCA  499 (515)
T ss_dssp             TEEESSCCSSSEEEEEECCGG-GTTCTTSTTHHHHHHTHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEEECCCTTCCHH
T ss_pred             CEEEeCCCCeeEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEECCceEEEEEEeCCCCCCHH
Confidence            888554555565554333321 000   0010 1       134444 455764422 111122468999994   6899


Q ss_pred             HHHHHHHHHHHHHHH
Q 014769          400 ALKDGLGRMKAFCQR  414 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~  414 (419)
                      +++.+++.|++++++
T Consensus       500 did~~~~~l~~~~~~  514 (515)
T 2jis_A          500 DMDFLLNELERLGQD  514 (515)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999987654

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.94  E-value=1.1e-24  Score=211.75  Aligned_cols=332  Identities=10%  Similarity=0.025  Sum_probs=231.3

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC--------CcEEEcccHHHHHHHHHHHhcC---
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA--------DDVYVTLGCKQAVEVILSVLAR---  129 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--------~~i~~t~g~~~al~~~~~~l~~---  129 (419)
                      +..+.+.+..++.. ....|....+..++++.+++++.+.+|.+...        ...++|+|+|+++..++.+.+.   
T Consensus        92 ~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~  170 (481)
T 4e1o_A           92 PSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI  170 (481)
T ss_dssp             HHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence            34455555555543 34577777788999999999999988865432        3678999999999888877642   


Q ss_pred             ----------------CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEe
Q 014769          130 ----------------PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------TAAMVII  187 (419)
Q Consensus       130 ----------------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~  187 (419)
                                      +++.|+++.++|.++...+...|.+++.++++  .++.+|+++|+++++++      +.+|+++
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~  248 (481)
T 4e1o_A          171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCAT  248 (481)
T ss_dssp             HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEe
Confidence                            46789999999999999888899999999874  46789999999998653      5667888


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      .++|+||.+-+   +++|.++|+++|+++++|++|+.+.+....... +..+..  -..+..+.+|+++.| ..+|++++
T Consensus       249 ~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~--aDsi~~~~hK~l~~p-~g~g~l~~  322 (481)
T 4e1o_A          249 LGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY--ADSFTFNPSKWMMVH-FDCTGFWV  322 (481)
T ss_dssp             BSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEE
T ss_pred             cCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc--CCEEEEChHHhcCCC-CceEEEEE
Confidence            99999999977   999999999999999999999876432221111 111111  124556899986554 55788887


Q ss_pred             eCCCCccchhhHHH-HHHhhhcc---------------c--cC--CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Q 014769          267 NDPNGIFQKSGIID-SIKDCLSI---------------Y--SD--IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEIC  326 (419)
Q Consensus       267 ~~~~~~~~~~~~~~-~l~~~~~~---------------~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  326 (419)
                      +++       .... .+.....+               .  .+  ...+.++++...+.   .+.++++.++..++++++
T Consensus       323 ~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g---~~g~~~~~~~~~~~a~~l  392 (481)
T 4e1o_A          323 KDK-------YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG---VKNLQAHVRHGTEMAKYF  392 (481)
T ss_dssp             SBH-------HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred             eCH-------HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHH
Confidence            652       1111 11100000               0  00  12333444444442   467888899999999999


Q ss_pred             HHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHH
Q 014769          327 YDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKD  403 (419)
Q Consensus       327 ~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~  403 (419)
                      .+.|+++|+++++ .+....+++++++...    ....++..++.++..+.+.|+.. ....++|+++.   +++++|++
T Consensus       393 ~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~  466 (481)
T 4e1o_A          393 ESLVRNDPSFEIP-AKRHLGLVVFRLKGPN----SLTENVLKEIAKAGRLFLIPATI-QDKLIIRFTVTSQFTTRDDILR  466 (481)
T ss_dssp             HHHHHTCTTEECC-SCCCSSEEEEEESSCH----HHHHHHHHHHHHHCSSBCEEEEE-TTEEEEEEECCCTTCCHHHHHH
T ss_pred             HHHHhcCCCeEEe-cCCceeEEEEEeCCch----HHHHHHHHHHHhCCeEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHH
Confidence            9999999898854 4444556677775311    12456777776553355555432 23468999973   47899999


Q ss_pred             HHHHHHHHHHHHhc
Q 014769          404 GLGRMKAFCQRHTK  417 (419)
Q Consensus       404 ~l~~l~~~~~~~~~  417 (419)
                      ++++|+++++++.+
T Consensus       467 ~~~~i~~~~~~l~~  480 (481)
T 4e1o_A          467 DWNLIRDAATLILS  480 (481)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999988764

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.94  E-value=2.1e-26  Score=221.45  Aligned_cols=290  Identities=10%  Similarity=0.035  Sum_probs=191.9

Q ss_pred             CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEec
Q 014769           81 ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL  160 (419)
Q Consensus        81 ~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~  160 (419)
                      .+.....++++.+++ +      +.+ +++++|+|+++++..++.+++++||+|+++.|+|.++...+...|..+++++.
T Consensus        54 ~~~~~~~~~~~~la~-~------g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~  125 (446)
T 2x3l_A           54 HPEEVILKSMKQVEK-H------SDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIET  125 (446)
T ss_dssp             SCSSHHHHHHHHHCS-C------TTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEE
T ss_pred             CcchHHHHHHHHHHh-c------CCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeC
Confidence            344455677777777 5      333 68999999999999999999999999999999999998888889999988887


Q ss_pred             cCCCC----cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCc
Q 014769          161 LPERN----WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPM  235 (419)
Q Consensus       161 ~~~~~----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~  235 (419)
                      ..+.+    +.+|++.+   +.++++++++++ .|+||.+.+   +++|.++|+++|+++|+|++|+. +.|.+. +.+.
T Consensus       126 ~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~  197 (446)
T 2x3l_A          126 HQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDST  197 (446)
T ss_dssp             EECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCG
T ss_pred             eeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCCh
Confidence            32222    56788877   455788999999 555999999   88999999999999999999986 444443 2233


Q ss_pred             cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHH
Q 014769          236 GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       236 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      ..++.+   +++.|+||.+ .++.++||++++++  +.   + ...++...  ..+++++.....++..+++.......+
T Consensus       198 ~~~g~D---i~~~S~~K~l-~~~~g~g~l~~~~~--~i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~  267 (446)
T 2x3l_A          198 LNYQAD---YVVQSFHKTL-PALTMGSVLYIHKN--AP---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDST  267 (446)
T ss_dssp             GGGTCS---EEEECHHHHS-SSCTTCEEEEEETT--CT---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCH
T ss_pred             HHcCCC---EEEECCcccc-ccccccEEEEEcCC--cC---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHH
Confidence            333332   8889999963 33345899999763  22   1 12222221  113344544444443333221111111


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee-cCCCCCCCCeEEE
Q 014769          314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT-PGIYVGLKNWLRI  392 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~~Ri  392 (419)
                      +..++.+++.+.+++.     ++.++ .+.++.++|+.++.      .+..++...|.+ +||.+. +|     .+++|+
T Consensus       268 ~~~~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~~------~~~~~l~~~L~~-~GI~v~~~g-----~~~iRi  329 (446)
T 2x3l_A          268 LFFAKRAQLIECLENK-----GFEML-QVDDPLKLLIKYEG------FTGHDIQNWFMN-AHIYLELAD-----DYQALA  329 (446)
T ss_dssp             HHHHHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECTT------SCHHHHHHHHHH-TTEEESEEC-----SSCEEE
T ss_pred             HHHHHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeCC------cCHHHHHHHHHH-CCCEEEecC-----CCEEEE
Confidence            2344455555555554     45523 34445578888752      246677777754 599987 54     368999


Q ss_pred             Eee--cCHHHHHHHHHHHHHHHHHH
Q 014769          393 AFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       393 s~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +++  .+++++ ++++.|+++++++
T Consensus       330 ~~~~~~t~e~i-~l~~aL~~~~~~~  353 (446)
T 2x3l_A          330 ILPLWHHDDTY-LFDSLLRKIEDMI  353 (446)
T ss_dssp             ECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred             EeecCCCHHHH-HHHHHHHHHHHhh
Confidence            995  478899 9999999988655

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.94  E-value=2e-24  Score=207.84  Aligned_cols=359  Identities=11%  Similarity=0.029  Sum_probs=218.5

Q ss_pred             hHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHH
Q 014769           24 TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT------NSGIPPARRAIADYL   97 (419)
Q Consensus        24 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~l   97 (419)
                      .|..++++-..+.     .+.|.|-.+.     + ++++.|.+++...+.+....+|+.      ..-..++++...+.+
T Consensus        41 ~~~~~~~~e~~rq-----~~~i~lias~-----n-~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~  109 (490)
T 2a7v_A           41 EMWELLQREKDRQ-----CRGLELIASE-----N-FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA  109 (490)
T ss_dssp             HHHHHHHHHHHHH-----HHSEECCTTC-----C-CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----HcCceEECCC-----C-CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHH
Confidence            3666665433322     2456666542     2 368999999988775532223332      222347774444555


Q ss_pred             HhhCCCCCCCC---cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---H-----HHhhcCCEE--EEEeccCCC
Q 014769           98 SRDLPYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---G-----IAQRKQVEV--RHFDLLPER  164 (419)
Q Consensus        98 ~~~~~~~~~~~---~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~-----~~~~~g~~~--~~~~~~~~~  164 (419)
                      .+.+|  .+.+   ..++++|+++|+..++.++++|||+|+++++.|.++.   .     .+...|..+  ..+++++ .
T Consensus       110 a~l~g--~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~  186 (490)
T 2a7v_A          110 LEAFD--LDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-K  186 (490)
T ss_dssp             HHHTT--CCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-T
T ss_pred             HHHcC--CCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-c
Confidence            55454  3343   2355668899999999999999999999999886532   1     223345433  3344433 3


Q ss_pred             CcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCC
Q 014769          165 NWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIV  242 (419)
Q Consensus       165 ~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~  242 (419)
                      ++.+|++++++++.. ++++++++.++||+  ..+   +++|.++|+++|+++++|++|.. +.+.+....++.  ..  
T Consensus       187 ~~~iD~d~le~~l~~~~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a--  257 (490)
T 2a7v_A          187 TGLIDYNQLALTARLFRPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA--  257 (490)
T ss_dssp             TCSBCHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC--
T ss_pred             cCCcCHHHHHHHHhhcCCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC--
Confidence            468999999998853 67888888888875  445   89999999999999999999763 333333222331  12  


Q ss_pred             cEEEEecCCCcCCCCCceeEEEEeeCCCCccch-------hhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHH
Q 014769          243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK-------SGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~-------~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                       .+++.|+||.+  .|++.|++++++.-...+.       -++.+.++....  ..++++.....++..++.....+.++
T Consensus       258 -Div~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~  334 (490)
T 2a7v_A          258 -DIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFR  334 (490)
T ss_dssp             -SEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHH
T ss_pred             -CEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHH
Confidence             27888999985  5677899999763100000       024455554432  22345555455555555443223457


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----CCC
Q 014769          314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----LKN  388 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~  388 (419)
                      +..+++.++++.+.+.|.+. |+.++..+...+++|+.+....    .+..++ .++|++.||.+..+..++     .+.
T Consensus       335 ~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g----~~~~~~-~~~L~~~GI~v~~~~~p~d~~p~~~~  408 (490)
T 2a7v_A          335 EYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKG----LDGARA-ERVLELVSITANKNTCPGDRSAITPG  408 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTT----CCHHHH-HHHHHHTTEECEEECCTTCCCSSSCS
T ss_pred             HHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCC----CCHHHH-HHHHHhCCeEEecCccCCCCCCCCCC
Confidence            78889999999999999987 8874422345678888876421    134444 555688899998654333     257


Q ss_pred             eEEEEe------ecCHHHHHHHHHHHHHHHHH
Q 014769          389 WLRIAF------CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       389 ~~Ris~------~~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+||+.      +.++++++++++.|.+++..
T Consensus       409 ~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~  440 (490)
T 2a7v_A          409 GLRLGAPALTSRQFREDDFRRVVDFIDEGVNI  440 (490)
T ss_dssp             EEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             ceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence            899987      24789999999999988863

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.93  E-value=1.7e-24  Score=209.71  Aligned_cols=338  Identities=11%  Similarity=0.019  Sum_probs=228.2

Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-------CcEEEcccHHHHHHHHHHHhcC-----
Q 014769           62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-------DDVYVTLGCKQAVEVILSVLAR-----  129 (419)
Q Consensus        62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-------~~i~~t~g~~~al~~~~~~l~~-----  129 (419)
                      ..+.+.+...+. .....|...++..++++.+++|+.+.+|.+...       ...++|+|+|+++..++.+.+.     
T Consensus        88 ~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~  166 (475)
T 3k40_A           88 AIVADMLSGAIA-CIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE  166 (475)
T ss_dssp             HHHHHHHHHHHC-CCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-ccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence            344455555553 334467777788999999999999988865422       3689999999998888777632     


Q ss_pred             --------------CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCC
Q 014769          130 --------------PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINP  189 (419)
Q Consensus       130 --------------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p  189 (419)
                                    +++.|+++.++|.++...+...|.+++.++++  .++ +|+++|+++++++      +.+|+++.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~  243 (475)
T 3k40_A          167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLG  243 (475)
T ss_dssp             HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEec
Confidence                          24689999999999999999999999999875  346 9999999988753      456788899


Q ss_pred             CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      +|+||.+-+   +++|.++|+++|+++++|++|+...+....... +..+.  .-..+..+++|+++. ...+|++++++
T Consensus       244 ~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~--~~Ds~~~~~hK~l~~-p~g~g~l~~~~  317 (475)
T 3k40_A          244 TTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE--SADSFNFNPHKWMLV-NFDCSAMWLKD  317 (475)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGG--GCSEEEECHHHHSSC-CSSCEEEEESS
T ss_pred             CCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcc--cCCEEEECchhccCC-CCceEEEEEeC
Confidence            999999988   999999999999999999999875432211111 11111  112556789998543 45688888876


Q ss_pred             CCCccchhh-HHHHHHhh--------hccc--cC--CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769          269 PNGIFQKSG-IIDSIKDC--------LSIY--SD--IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC  335 (419)
Q Consensus       269 ~~~~~~~~~-~~~~l~~~--------~~~~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  335 (419)
                      +..+.+.-. ....+...        ....  .+  ...+.++++...+.   .+.++++.++..++++++.+.|+++|+
T Consensus       318 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~g  394 (475)
T 3k40_A          318 PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG---VENLQAHIRRHCNFAKQFGDLCVADSR  394 (475)
T ss_dssp             GGGC---------------------------CCCGGGTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            432110000 00011100        0000  01  11233333333332   467888899999999999999999889


Q ss_pred             CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHH
Q 014769          336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~  412 (419)
                      ++++..| ....++++++...    ....++..+|.++.++.+.|+..++ ..++|+++.   +++++|+++++.|++++
T Consensus       395 ~~l~~~~-~~~iv~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~~~~~~i~~~~  468 (475)
T 3k40_A          395 FELAAEI-NMGLVCFRLKGSN----ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDMEYSWKEVSAAA  468 (475)
T ss_dssp             EEESSCC-BTTEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEecCC-ceEEEEEEeCCch----HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            8855334 4445566664311    1246777777666555566554333 578999984   47899999999999999


Q ss_pred             HHHhcc
Q 014769          413 QRHTKK  418 (419)
Q Consensus       413 ~~~~~~  418 (419)
                      +++.++
T Consensus       469 ~~~~~~  474 (475)
T 3k40_A          469 DEMEQE  474 (475)
T ss_dssp             HHHHTC
T ss_pred             HHHhcc
Confidence            887653

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.93  E-value=7.5e-24  Score=203.78  Aligned_cols=280  Identities=19%  Similarity=0.166  Sum_probs=185.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHH-hcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEecc
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSV-LARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLL  161 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~-l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~  161 (419)
                      .++++.+++++      +.+++++++++|++.+.+.+..+ ..++||+|+++.++|+.+...+    +..|++++.++. 
T Consensus       111 ~~~~~~la~~~------g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-  183 (438)
T 1wyu_A          111 FEYQTMIAELA------GLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-  183 (438)
T ss_dssp             HHHHHHHHHHH------TSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             HHHHHHHHHHh------CCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-
Confidence            35555555555      45677889999999544444433 2468999999999999876544    457999998875 


Q ss_pred             CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccc-ccccccCCCCCCCccccCC
Q 014769          162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEV-YGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~-~~~~~~~~~~~~~~~~~~~  240 (419)
                        .++.+|+++    +++++++|++++| ||||.+.+   +++|.++|+++|+++++|.. .+...+   .. + ..++.
T Consensus       184 --~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~---~~-~-~~~g~  248 (438)
T 1wyu_A          184 --EGGRTPLPE----VGEEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVL---KP-P-GAYGA  248 (438)
T ss_dssp             --BTTBCCCCC----CCTTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTB---CC-H-HHHTC
T ss_pred             --cCCccCHHH----hCCCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCc---CC-C-ccCCC
Confidence              234677766    5667899999999 99999998   99999999999999996632 221111   11 1 22332


Q ss_pred             CCcEEEEecCCCcCC----CCCceeEEEEeeCCCCccchhhHHHHH----------------------------Hhhhcc
Q 014769          241 IVPVITLGSISKRWL----VPGWRFGWLVTNDPNGIFQKSGIIDSI----------------------------KDCLSI  288 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~l----------------------------~~~~~~  288 (419)
                      +   +++.| +|.|+    +.|.++||+++++.        +++.+                            +.... 
T Consensus       249 D---~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~--------~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~-  315 (438)
T 1wyu_A          249 D---IAVGD-GQSLGLPMGFGGPHFGFLATKKA--------FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKA-  315 (438)
T ss_dssp             S---EEEEE-CTTTTCCCGGGCSCCEEEEECGG--------GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGS-
T ss_pred             C---EEEEC-CcccCCCccCCCCCeeEEEEcHH--------HHHhCCCceeccccccCCCcceeeeccccccccchhcc-
Confidence            2   55666 55544    45678999998752        22222                            11111 


Q ss_pred             ccCC---chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE--EeecCcccccCCCCH
Q 014769          289 YSDI---PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT--MVKLNPWLLEDINDD  363 (419)
Q Consensus       289 ~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~--~~~~~~~~~~~~~~~  363 (419)
                      +...   +.....++..++.....+.+++..++++++++++.+.|++++|+.+. .+. .+|.  .++++       .+.
T Consensus       316 t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~-~~~~~~~~~~~-------~~~  386 (438)
T 1wyu_A          316 KSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPF-TPK-PFFNEFALALP-------KDP  386 (438)
T ss_dssp             SCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEEC-SCS-SBCSEEEEECS-------SCH
T ss_pred             cCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEC-CCC-CeEEEEEEeCC-------CCH
Confidence            1111   22222222222333224568888899999999999999998888743 443 3332  23332       146


Q ss_pred             HHHHHHHHHhcCeEe--ecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          364 IEFALKLAKEESVIV--TPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       364 ~~~~~~ll~~~gv~v--~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      .++..+|. ++||.+  .++..|. ++++|+++.  .++++++++++.|++++
T Consensus       387 ~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          387 EAVRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             HHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence            77887775 569998  6776554 789999996  68999999999998764

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.93  E-value=6.7e-25  Score=211.93  Aligned_cols=297  Identities=13%  Similarity=0.095  Sum_probs=202.1

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH-HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCK-QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP  162 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~-~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~  162 (419)
                      ..++.+.+.+++.+.+|..  ++ +++|+|++ .++..++.++..  +|+.|++++++|+.+...++..|++++.+++.+
T Consensus       131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~  207 (456)
T 2z67_A          131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL  207 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence            3456666666666666643  44 99999999 466555555443  678899999999999999999999999888643


Q ss_pred             -CCCcccChHHHHHhh-c----CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769          163 -ERNWEVDLDAVEALA-D----KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG  236 (419)
Q Consensus       163 -~~~~~~~~~~l~~~~-~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  236 (419)
                       +.++.+|+++|++++ +    .++.+|++++|+||||.+.|   +++|.++|+++|+++++|++|+.+.++. ......
T Consensus       208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~-~~~~~~  283 (456)
T 2z67_A          208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYY-LEKLKK  283 (456)
T ss_dssp             ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH-HHHHHH
T ss_pred             cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHh-hHHHHH
Confidence             356789999999998 4    35667778999999999988   8999999999999999999998654321 000111


Q ss_pred             ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-cCCchHHHHHHHHHHcccchHHHHHH
Q 014769          237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKEDFFCKL  315 (419)
Q Consensus       237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~  315 (419)
                      .+.. ...+++.|++|. +..+.++||++++++       ++++.+....... ...+...+.++...+.   .+.+++.
T Consensus       284 ~~~~-~~D~~~~s~hK~-~~~p~g~G~l~~~~~-------~~~~~l~~~~~g~~~~~~~~~~~aal~~l~---~~~~~~~  351 (456)
T 2z67_A          284 AFKY-RVDAVVSSSDKN-LLTPIGGGLVYSTDA-------EFIKEISLSYPGRASATPVVNTLVSLLSMG---SKNYLEL  351 (456)
T ss_dssp             HHTS-CCSEEEEEHHHH-HCCCSSCEEEEESCH-------HHHHHHHTTSCSCBCSHHHHHHHHHHHHHH---HHHHHHH
T ss_pred             hhCC-CCCEEEEcCCCC-cCCCCCeEEEEEcCH-------HHHhhcCcCCCCCCCCCHHHHHHHHHHHHH---HHHHHHH
Confidence            1111 112567899997 455688999999542       4666664322111 1112333444333332   4667888


Q ss_pred             HHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeec--CcccccCCCCHHHHHHHHHHhcCe---Eee------cC
Q 014769          316 IDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKL--NPWLLEDINDDIEFALKLAKEESV---IVT------PG  381 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~gv---~v~------~g  381 (419)
                      .++..++++++.+.|++++   ++. +..|.  .++++.+  +.       ...++...|. ++||   .+.      +|
T Consensus       352 ~~~~~~~~~~l~~~L~~~~~~~g~~-v~~~~--~~v~~~~~~~~-------~~~~l~~~L~-~~gi~~~rv~~~~g~f~G  420 (456)
T 2z67_A          352 VKNQKNSKKLLDELLNDLSKKTGGK-FLDVE--SPIASCISVNS-------DPVEIAAKLY-NLRVTGPRGIKKTDHFGN  420 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCC-BCCCC--CSSEEEEECSS-------CHHHHHHHHH-HTTEESCEEECTTCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCE-ecCCC--CeEEEEEeccc-------HHHHHHHHHH-HcCCCcceEEeecCcccc
Confidence            8999999999999998875   666 43555  3445555  31       1356766664 4564   443      23


Q ss_pred             CCCCC--CCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          382 IYVGL--KNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       382 ~~~~~--~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      ..+..  .+++|++++  .+++++++++++|++++
T Consensus       421 ~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          421 CYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             TCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred             ccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence            33322  479999985  68999999999998754

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.88  E-value=8.7e-28  Score=229.99  Aligned_cols=339  Identities=13%  Similarity=0.036  Sum_probs=223.6

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|.....- -..+|.+.+++.+++.......|+. ....+|.+.|++++      + ..+.+++++|++
T Consensus        96 D~dG~~yiD~~~~~~~~~l-Gh~~p~V~~Av~~q~~~~~~~~~~~-~~~~~Lae~L~~~~------p-~~~~v~~~nSGs  166 (465)
T 2yky_A           96 DVDGHAYVNFLGEYTAGLF-GHSHPVIRAAVERALAVGLNLSTQT-ENEALFAEAVCDRF------P-SIDLVRFTNSGT  166 (465)
Confidence            3458899999998643211 1257899999999887654334443 34567777777765      2 457899999999


Q ss_pred             HHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHh----hcCCEEEEEeccCCCCcccChHHHHHhhc---CCccEEEEeC
Q 014769          118 QAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDLLPERNWEVDLDAVEALAD---KNTAAMVIIN  188 (419)
Q Consensus       118 ~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~  188 (419)
                      +|+..+++.+.  ..++.|++.+++|+++...+.    ..|+....+.++    + -|++.|+++++   +++++|++..
T Consensus       167 eA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~----~-~d~~~l~~~l~~~~~~~aavi~ep  241 (465)
T 2yky_A          167 EANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGV----Y-NDVEGTADLLKRHGHDCAAILVEP  241 (465)
Confidence            99999998764  245999999999987654333    122211111111    1 26788888887   4555555544


Q ss_pred             CCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      .++++|.+ .+.+++++|.++|+++|+++|+||+|. +.. +. ......++.   ...+.||||.++. |+|+||++++
T Consensus       242 v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~gv---~pDi~t~sK~lg~-G~piG~v~~~  314 (465)
T 2yky_A          242 MLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEMLGI---SADLTTLGKYIGG-GMSFGAFGGR  314 (465)
Confidence            35669964 568999999999999999999999999 633 22 111222221   1234489999765 9999999987


Q ss_pred             CCCCccchhhHHHHHHh------hhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC---CCCC
Q 014769          268 DPNGIFQKSGIIDSIKD------CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP---CISC  338 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~  338 (419)
                      +        ++++.+..      ....+++.+++++.++.++|+....   +...++++++.+++++.|+++.   ++. 
T Consensus       315 ~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~-  382 (465)
T 2yky_A          315 R--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQAP-  382 (465)
Confidence            6        46666654      1233567788888888888875322   2345556666666666665531   222 


Q ss_pred             CCCCCceEEEEeecCccccc--------CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          339 PNKPEGSMVTMVKLNPWLLE--------DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       339 ~~~p~~g~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                      ...+..|.++++.++.....        .......+...++ ++||++.|+. |..     +++..++++|++++++|++
T Consensus       383 ~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~~~-----~s~~~t~edid~~l~~l~~  455 (465)
T 2yky_A          383 LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRG-MYA-----LSLEIADAGRDAFAEALAD  455 (465)
Confidence            22455677888877531100        0001345666665 6799999876 321     6777899999999999999


Q ss_pred             HHHHHh
Q 014769          411 FCQRHT  416 (419)
Q Consensus       411 ~~~~~~  416 (419)
                      +++++.
T Consensus       456 ~l~~~~  461 (465)
T 2yky_A          456 FIGEQR  461 (465)
Confidence            987753

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.93  E-value=5.7e-25  Score=213.06  Aligned_cols=340  Identities=10%  Similarity=-0.007  Sum_probs=218.9

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      +|+.+|||..|...... ...+|.+.+++.+++...   ....|+. ....++++.+++.+.+..+  .+.++|++++|+
T Consensus        61 dG~~ylD~~~g~~~~~l-Gh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sG  136 (472)
T 1ohv_A           61 DGNRMLDLYSQISSIPI-GYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACG  136 (472)
T ss_dssp             TSCEEEESSHHHHTCSS-CBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSH
T ss_pred             CCCEEEECCCCHhhccc-CCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCc
Confidence            47889999988654321 125899999998875321   1113443 3456899999997766443  356799999999


Q ss_pred             HHHHHHHHHHhc--------C-----------------CC---CeEEeeCCCCCCcHHHHhhc-CC--------EE---E
Q 014769          117 KQAVEVILSVLA--------R-----------------PG---ANVLLPRPGWPYYEGIAQRK-QV--------EV---R  156 (419)
Q Consensus       117 ~~al~~~~~~l~--------~-----------------~g---d~vlv~~p~~~~~~~~~~~~-g~--------~~---~  156 (419)
                      ++|++.+++.+.        .                 +|   +.|++.+++|+++...+... |.        ..   .
T Consensus       137 seA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~  216 (472)
T 1ohv_A          137 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP  216 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCC
T ss_pred             hhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCc
Confidence            999999998873        1                 45   89999999999875544322 21        11   1


Q ss_pred             EEeccCCC-C------c-----ccChHHHHHhhcC------CccEEEEeCCCCcccc-CCCHHHHHHHHHHHHhCCCeEE
Q 014769          157 HFDLLPER-N------W-----EVDLDAVEALADK------NTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       157 ~~~~~~~~-~------~-----~~~~~~l~~~~~~------~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li  217 (419)
                      .+++.... .      +     ..|++.|++++++      ++++|++...+|++|. ..+.+++++|.++|+++|+++|
T Consensus       217 ~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli  296 (472)
T 1ohv_A          217 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL  296 (472)
T ss_dssp             EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             ccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence            11221000 0      0     1257888888865      5555555555788996 5789999999999999999999


Q ss_pred             EcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHH
Q 014769          218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFI  296 (419)
Q Consensus       218 ~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~  296 (419)
                      +||+|.++.+.|.. ..+..++.. ..+.+.||||.+ +.|   ||++ +.        ++. .+... ...+++.++++
T Consensus       297 ~DEv~~g~g~~g~~-~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~~~  360 (472)
T 1ohv_A          297 VDEVQTGGGSTGKF-WAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDPSK  360 (472)
T ss_dssp             EECTTTTTTTTSSS-SGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCHHH
T ss_pred             EeCcccCCCCCCCc-hhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccHHH
Confidence            99999976655431 122222211 001133889985 445   7776 32        121 11111 12245668888


Q ss_pred             HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC----CC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHH
Q 014769          297 QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----PC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLA  371 (419)
Q Consensus       297 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll  371 (419)
                      +.++.++|+....   +...++++++++++.+.|+++    |+ +. ...+. |.++++.++..     .+...++.+|+
T Consensus       361 ~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~-~~~~~-g~~~~~~~~~~-----~~~~~~~~~l~  430 (472)
T 1ohv_A          361 NLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFIS-RVRGR-GTFCSFDTPDE-----SIRNKLISIAR  430 (472)
T ss_dssp             HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCE-EEEEE-TTEEEEECSSH-----HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEE-eecCC-ceEEEEEeCCh-----hHHHHHHHHHH
Confidence            8888877764221   234566666777777666543    32 22 11334 55666676531     12456777775


Q ss_pred             HhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHH
Q 014769          372 KEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       372 ~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~  414 (419)
                       ++||.+.|+.    .+++|+++  ..++++|++++++|++++++
T Consensus       431 -~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  470 (472)
T 1ohv_A          431 -NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILAD  470 (472)
T ss_dssp             -HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             -HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence             5799999863    57999977  46899999999999999875

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.93  E-value=2.9e-23  Score=198.35  Aligned_cols=290  Identities=18%  Similarity=0.117  Sum_probs=190.6

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEE-e
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHF-D  159 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~-~  159 (419)
                      ...++++.+++++.      ..  ..++++++++++..++.+++++||+|+++.++|++....+    ...|.++..+ +
T Consensus        59 ~~~~l~~~la~~~g------~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  130 (421)
T 2ctz_A           59 TVDVLEKRLAALEG------GK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR  130 (421)
T ss_dssp             HHHHHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred             HHHHHHHHHHHHhC------CC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence            34789999999982      22  3455555699999999999899999999999998765554    6789988877 5


Q ss_pred             ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc-cccccCCCCCCCcccc
Q 014769          160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY-GHLTFGSIPYTPMGLF  238 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~  238 (419)
                      .+       |++++++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++| +.. +.+.   ++ ..
T Consensus       131 ~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~  195 (421)
T 2ctz_A          131 EE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AW  195 (421)
T ss_dssp             TC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GG
T ss_pred             CC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-cc
Confidence            42       789999999888999999999999999999   899999999999999999999 543 2222   12 22


Q ss_pred             CCCCcEEEEecCCCcCCCCCceeEEEEeeCCC-Cc-cc-hhhH---------------------HHHHHh--hhccccCC
Q 014769          239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPN-GI-FQ-KSGI---------------------IDSIKD--CLSIYSDI  292 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~-~~-~~-~~~~---------------------~~~l~~--~~~~~~~~  292 (419)
                      +   ..+++.|+||.++.+|.++|++++.+.+ .+ .. ...+                     ....+.  ...+....
T Consensus       196 ~---~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~  272 (421)
T 2ctz_A          196 G---AALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQAL  272 (421)
T ss_dssp             T---CSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCC
T ss_pred             C---CeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCC
Confidence            2   3488899999999999999998886321 11 00 0001                     111110  01112233


Q ss_pred             chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----------------CceEEEEeecCcc
Q 014769          293 PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-----------------EGSMVTMVKLNPW  355 (419)
Q Consensus       293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----------------~~g~~~~~~~~~~  355 (419)
                      ++...+++...++.     +..+.++..++.+.+.+.|+++|++..+..|                 ..|..+.+.++..
T Consensus       273 ~~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~  347 (421)
T 2ctz_A          273 GPFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGG  347 (421)
T ss_dssp             CHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTH
T ss_pred             CHHHHHHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCC
Confidence            44444444444433     4445566667888899999888776533222                 2244555666521


Q ss_pred             cccCCCCHHHHHHHHHHhcCeEeecCCCC----------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVIVTPGIYV----------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      .    .+...++..+ +..++.++.|...                      +. ++.+|+|++.  ++++++++.|++++
T Consensus       348 ~----~~~~~~~~~l-~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~~al  420 (421)
T 2ctz_A          348 Y----EAAKRFISRL-KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELKEAL  420 (421)
T ss_dssp             H----HHHHHHHHTC-SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHT
T ss_pred             H----HHHHHHHHhC-CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHh
Confidence            0    0122233332 3344444444221                      11 4789999976  47778888887765

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.92  E-value=9.2e-23  Score=193.29  Aligned_cols=307  Identities=15%  Similarity=0.113  Sum_probs=207.6

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-------cCCC
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-------ARPG  131 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-------~~~g  131 (419)
                      ..++.+.+++.+.+...   .|.+..+..++|+++++++      +.  +++++++++++++..++.++       .++|
T Consensus        12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~------~~--~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g   80 (390)
T 3b8x_A           12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTF------GS--KYAVMVSSGSTANLLMIAALFFTKKPRLKKG   80 (390)
T ss_dssp             CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHH------TC--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred             CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHH------CC--CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence            35678888998888653   3555668899999999998      32  26777778889999999998       7789


Q ss_pred             CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       132 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      |+|+++.|+|.++...+...|.+++.++++++ ++.+|++.+++++++++++|++++   ++|...+   +++|.++|++
T Consensus        81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~---~~~i~~l~~~  153 (390)
T 3b8x_A           81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPNN---FDEINKIIGG  153 (390)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCC---HHHHHHHHTT
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChhh---HHHHHHHHHH
Confidence            99999999999999889999999999988653 478999999999988888888874   4566566   9999999999


Q ss_pred             CCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEec--CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc
Q 014769          212 LRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGS--ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI  288 (419)
Q Consensus       212 ~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s--~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~  288 (419)
                      +|+++|+|++|+.+. +.+      ..++.... +...|  .+|.+. +| +.|+++++++       ++.+.++.....
T Consensus       154 ~~~~li~D~a~~~g~~~~~------~~~g~~~~-~~~~s~~~~k~~~-~g-~gG~~~~~~~-------~l~~~~~~~~~~  217 (390)
T 3b8x_A          154 RDIILLEDNCESMGATFNN------KCAGTFGL-MGTFSSFYSNHIA-TM-EGGCIVTDDE-------EIYHILLCIRAH  217 (390)
T ss_dssp             SCCEEEEECTTCTTCEETT------EETTSSSS-EEEEECCTTSSSC-SS-SCEEEEESCH-------HHHHHHHHHTBT
T ss_pred             cCCEEEEECcCcccCEECC------cccccccc-eEEEEccCCCCCc-cC-CceEEEeCCH-------HHHHHHHHHHhc
Confidence            999999999999532 221      12222111 22222  245432 23 3499888641       344444332210


Q ss_pred             --------------------------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769          289 --------------------------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCI  336 (419)
Q Consensus       289 --------------------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  336 (419)
                                                      ....+.+...++...+     +.+++..++.+++++++.+.|+++|++
T Consensus       218 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~  292 (390)
T 3b8x_A          218 GWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYL  292 (390)
T ss_dssp             TBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred             CCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence                                            0113333333332223     456777888889999999999988777


Q ss_pred             CCCCCC-CceE-EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC---CCCCC----------------------CCe
Q 014769          337 SCPNKP-EGSM-VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG---IYVGL----------------------KNW  389 (419)
Q Consensus       337 ~~~~~p-~~g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g---~~~~~----------------------~~~  389 (419)
                      .....+ ..++ .+++.++..   ...+..++...| .++||.+.+.   ..+..                      .+.
T Consensus       293 ~~~~~~~~~~~~~~~i~~~~~---~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (390)
T 3b8x_A          293 DVQQETGESSWFGFSFIIKKD---SGVIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG  368 (390)
T ss_dssp             EECCCCSBCCCCEEEEEECTT---SCCCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred             ccCCCCCCcccEEEEEEecCc---CcccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence            633221 2232 345555421   011456676666 6689998862   21111                      135


Q ss_pred             EEEEee--cCHHHHHHHHHHH
Q 014769          390 LRIAFC--AEPSALKDGLGRM  408 (419)
Q Consensus       390 ~Ris~~--~~~~~l~~~l~~l  408 (419)
                      +||++.  .++++++.+++.|
T Consensus       369 l~l~~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          369 LFVGNHQIELFDEIDYLREVL  389 (390)
T ss_dssp             EEEECCSSCCHHHHHHHHHHT
T ss_pred             EEeeCCCCCCHHHHHHHHHhh
Confidence            999994  6899999998876

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.91  E-value=1.1e-22  Score=204.13  Aligned_cols=309  Identities=13%  Similarity=0.048  Sum_probs=205.1

Q ss_pred             CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH-HhhcCCEEEEEeccC
Q 014769           84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI-AQRKQVEVRHFDLLP  162 (419)
Q Consensus        84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~  162 (419)
                      .-..++++.+|+++      +.+ ..+++++|+++++..++.+++++||.|+++.++|.++... +...|+.+++++...
T Consensus       173 ~~i~e~e~~lA~~~------gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~  245 (730)
T 1c4k_A          173 GPAVAAEKHAARVY------NAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR  245 (730)
T ss_dssp             THHHHHHHHHHHHT------TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred             HHHHHHHHHHHHHH------CCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc
Confidence            34578999999887      333 3588899999999999999999999999999999988777 788899988887643


Q ss_pred             CCCc----ccChHHH-----HHhhcCC------c----cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccc
Q 014769          163 ERNW----EVDLDAV-----EALADKN------T----AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG  223 (419)
Q Consensus       163 ~~~~----~~~~~~l-----~~~~~~~------~----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~  223 (419)
                      + ++    .+|++.|     +++++++      +    +++++++| ||+|.+.+   +++|+++|+++++++++|++|+
T Consensus       246 ~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~  320 (730)
T 1c4k_A          246 N-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWV  320 (730)
T ss_dssp             C-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTC
T ss_pred             c-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcccc
Confidence            2 22    3688888     8888765      4    78899998 58999998   8999999999999999999997


Q ss_pred             cc-ccCCCC--CCCcc--ccCC-CCcEEEEecCCCcCCCCCcee-EEEEeeCCCC-----ccchhhHHHHHHhhh--ccc
Q 014769          224 HL-TFGSIP--YTPMG--LFGS-IVPVITLGSISKRWLVPGWRF-GWLVTNDPNG-----IFQKSGIIDSIKDCL--SIY  289 (419)
Q Consensus       224 ~~-~~~~~~--~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~-----~~~~~~~~~~l~~~~--~~~  289 (419)
                      .. .+++..  ..++.  .++. +.+++++.|+||.  ++|++. |+++++++..     ...    ...++...  ..+
T Consensus       321 ~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~--L~g~~~gg~I~v~~~~l~g~~~~i~----~~~~~~~~~~~~s  394 (730)
T 1c4k_A          321 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQ--QAGFSQTSQIHKKDSHIKGQLRYCD----HKHFNNSFNLFMS  394 (730)
T ss_dssp             CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHH--SSCCTTCEEEEEECGGGTTSTTCCC----HHHHHHHHHHHSC
T ss_pred             cccccCcccCCcCcccccccCCCCCCEEEEECCCCC--CCCCCCEEEEEecchhhcCcccccC----HHHHHHHHHHhCC
Confidence            43 343211  11221  1222 3457999999998  455554 5665554320     111    11222221  123


Q ss_pred             cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC-------------------------
Q 014769          290 SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPE-------------------------  343 (419)
Q Consensus       290 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~-------------------------  343 (419)
                      .+++.....++..++.....+...+..+++.++.+.+++.|++ ++++.++ .|.                         
T Consensus       395 tsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~  473 (730)
T 1c4k_A          395 TSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFE  473 (730)
T ss_dssp             SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCC
T ss_pred             CCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccC
Confidence            4556555555544444322223345566777788888888877 6676633 221                         


Q ss_pred             ------------ce-EE-----EEeecCcc-----ccc-CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecC
Q 014769          344 ------------GS-MV-----TMVKLNPW-----LLE-DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAE  397 (419)
Q Consensus       344 ------------~g-~~-----~~~~~~~~-----~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~  397 (419)
                                  .+ ++     +.+..+..     .+. ...+..++...| .++||.+....    ...+|+++  +.+
T Consensus       474 ~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L-~e~GI~v~~~~----~~~ir~~~s~g~t  548 (730)
T 1c4k_A          474 KGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKSD----LNSILFLMTPAET  548 (730)
T ss_dssp             TTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEEC----SSEEEEECCTTCC
T ss_pred             ccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHH-HHCCcEEEECC----CCeEEEEeCCCCC
Confidence                        11 11     34444310     000 012456666666 56699886532    46789888  468


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 014769          398 PSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~~~~~  416 (419)
                      +++++.+++.|.++.+.+.
T Consensus       549 ~e~i~~Ll~aL~~i~~~~~  567 (730)
T 1c4k_A          549 PAKMNNLITQLLQLQRLIE  567 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence            8999999999999987764

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.91  E-value=9.3e-23  Score=192.69  Aligned_cols=270  Identities=17%  Similarity=0.170  Sum_probs=187.1

Q ss_pred             HHHHHHHHHHHhC----C--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCC
Q 014769           62 VEAEDAIVDAVRS----G--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGA  132 (419)
Q Consensus        62 ~~v~~a~~~~~~~----~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd  132 (419)
                      ..+.+++.+....    +  ....|+. .|..+|++.+|+++      +  .+..++   ++|+++++..++.+++++||
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~------g--~e~alv~p~~~sGt~Ai~~al~all~~GD  102 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVF------K--TEAALVRPQIISGTHAISTVLFGILRPDD  102 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHH------T--CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHh------C--CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence            4566777664311    1  1224555 35688999999988      2  244555   88999999999999999999


Q ss_pred             eEEeeC-CCCCCcHH----------HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC----CCCccccCC
Q 014769          133 NVLLPR-PGWPYYEG----------IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN----PGNPCGNVF  197 (419)
Q Consensus       133 ~vlv~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~----p~nptG~~~  197 (419)
                      +|+++. |.|..+..          .++..|.+++.+++++  ++.+|++.+++++++++++|++++    |+||||.+.
T Consensus       103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~  180 (409)
T 3jzl_A          103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIE  180 (409)
T ss_dssp             EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHH
T ss_pred             EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccc
Confidence            999998 99998763          4466788888887653  467999999999998899999999    999999875


Q ss_pred             CHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccc
Q 014769          198 TYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQ  274 (419)
Q Consensus       198 ~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~  274 (419)
                      +   +++|+++|++  +|+++++|++|+.+.+...+   . ..+.   .++++|+||.++.+| ...||++++.      
T Consensus       181 ~---l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~g~---Div~~S~sK~lgg~~~~~GG~v~~~~------  244 (409)
T 3jzl_A          181 K---IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EVGA---DIIAGSLIKNPGGGLAKTGGYIAGKE------  244 (409)
T ss_dssp             H---HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GGTC---SEEEEETTSGGGTTTCSSCEEEEECH------
T ss_pred             c---HHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-ccCC---eEEEECccccCCccCCceEEEEEeCH------
Confidence            5   9999999999  99999999999876543221   1 2222   388999999987766 4569998864      


Q ss_pred             hhhHHHHHHhhhc-----cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc-----
Q 014769          275 KSGIIDSIKDCLS-----IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG-----  344 (419)
Q Consensus       275 ~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~-----  344 (419)
                        ++++.++....     ...++......++...+.     ....+.++..+++..+.+.|+++ ++. + .|..     
T Consensus       245 --~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~~~a~~la~~L~~~-g~~-v-~p~~~~~~~  314 (409)
T 3jzl_A          245 --ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAIKGARFTAAMLAEF-GVE-A-DPVWDAPRT  314 (409)
T ss_dssp             --HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTSCCS
T ss_pred             --HHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cCCCCCCCc
Confidence              67887776421     112222211233333332     34556777888899999999987 555 3 2222     


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEE  374 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  374 (419)
                      ...+.+.++..     .....+++.| ++.
T Consensus       315 ~~i~~i~l~~~-----~~~~~~~~~L-~~~  338 (409)
T 3jzl_A          315 DLIQSVSFHNK-----EKMVAFAQAI-QAA  338 (409)
T ss_dssp             SSCCEEECSCH-----HHHHHHHHHH-HHT
T ss_pred             cEEEEEEeCCH-----HHHHHHHHHH-Hhc
Confidence            22445556421     1345666666 444

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.90  E-value=1.9e-22  Score=191.07  Aligned_cols=266  Identities=16%  Similarity=0.148  Sum_probs=184.3

Q ss_pred             HHHHHHHHHHHhC------CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCC
Q 014769           62 VEAEDAIVDAVRS------GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGA  132 (419)
Q Consensus        62 ~~v~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd  132 (419)
                      +.+.+++.+....      .....|+.. |..+|++.+++++      +  .+..++   ++|+++|+..++.++++|||
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~------g--~e~alv~p~~~sGt~A~~~al~all~pGD  117 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIF------N--TESAFVRPHFVNGTHAIGAALFGNLRPND  117 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHH------T--CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHh------C--CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence            5677777664321      112345553 6788999999988      2  344466   78899999999999999999


Q ss_pred             eEEeeC-CCCCCcH-----------HHHhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeC----CCCccc
Q 014769          133 NVLLPR-PGWPYYE-----------GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIIN----PGNPCG  194 (419)
Q Consensus       133 ~vlv~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~----p~nptG  194 (419)
                      +|++++ |.|.++.           ..++..|++++.+++   .++.+|++.++++++  +++++|++++    |+||||
T Consensus       118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg  194 (427)
T 3hvy_A          118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL  194 (427)
T ss_dssp             EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred             EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence            999999 9998775           345667888888876   346799999999998  7899999999    999998


Q ss_pred             cCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCC
Q 014769          195 NVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNG  271 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~  271 (419)
                      .+.   ++++|+++|++  +|+++++|++|+.+.+...+   + ..+.   .++++|+||.++.+| .+.||++++.   
T Consensus       195 ~v~---dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~-~~ga---Div~~S~sK~lgg~g~~~GG~i~~~~---  261 (427)
T 3hvy_A          195 RIA---EIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---T-DVGA---DIIAGSLIKNIGGGIATTGGYIAGKE---  261 (427)
T ss_dssp             CHH---HHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---G-GGTC---SEEEEETTSGGGTTTCCSCEEEEECH---
T ss_pred             cHH---HHHHHHHHHHHhCCCCEEEEECCccccccCCCC---c-ccCC---eEEEECCcccccccccceEEEEEECH---
Confidence            765   49999999999  89999999999876543221   1 2222   388999999987655 5679998864   


Q ss_pred             ccchhhHHHHHHhhhc---cc--cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--
Q 014769          272 IFQKSGIIDSIKDCLS---IY--SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG--  344 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~~---~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--  344 (419)
                           ++++.++....   ..  .+++......+...+     .....+.++..+++..+.+.|+++ ++. + .|..  
T Consensus       262 -----~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~  328 (427)
T 3hvy_A          262 -----EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-----FMAPHVTIEAVKGAVFCARIMELA-GFD-V-LPKYND  328 (427)
T ss_dssp             -----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred             -----HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-----hHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence                 68888876431   11  112111123333333     224456677888888999999887 455 3 2322  


Q ss_pred             ---eEEEEeecCcccccCCCCHHHHHHHH
Q 014769          345 ---SMVTMVKLNPWLLEDINDDIEFALKL  370 (419)
Q Consensus       345 ---g~~~~~~~~~~~~~~~~~~~~~~~~l  370 (419)
                         ...+.+.+...     ....++++.+
T Consensus       329 ~~~~li~~~~l~~~-----~~~~~f~~~l  352 (427)
T 3hvy_A          329 KRTDIIQAIKFNDE-----KKLIDFIKGI  352 (427)
T ss_dssp             CCSSSEEEEECSSH-----HHHHHHHHHH
T ss_pred             CCceEEEEEeCCCH-----HHHHHHHHHh
Confidence               22556666421     1234566665

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.90  E-value=2.1e-22  Score=190.80  Aligned_cols=267  Identities=16%  Similarity=0.151  Sum_probs=184.2

Q ss_pred             HHHHHHHHHHHhC------CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCC
Q 014769           62 VEAEDAIVDAVRS------GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGA  132 (419)
Q Consensus        62 ~~v~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd  132 (419)
                      +.+++++.+....      .....|+. .|..+|++.+++++      +.  +..++   ++|+++++..++.++++|||
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~-~~~~~Le~~lA~l~------g~--e~alv~p~~~sGt~Ai~~al~all~pGD  116 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYGD-IGRDSLDAVYARVF------NT--ESALVRPHFVNGTHALGAALFGNLRPGN  116 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHH------TC--SEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCCH-HHHHHHHHHHHHHh------CC--cceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence            4566666654211      11123554 36788999999988      33  33355   88889999999999999999


Q ss_pred             eEEeeC-CCCCCcH-----------HHHhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeC----CCCccc
Q 014769          133 NVLLPR-PGWPYYE-----------GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIIN----PGNPCG  194 (419)
Q Consensus       133 ~vlv~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~----p~nptG  194 (419)
                      +|++++ |.|.++.           ..++..|++++.+++++  ++.+|++.++++++  +++++|++++    |+||||
T Consensus       117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg  194 (427)
T 3i16_A          117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRAL  194 (427)
T ss_dssp             EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCC
T ss_pred             EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcc
Confidence            999999 9998776           34566788888887653  34689999999998  7899999999    999998


Q ss_pred             cCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCC
Q 014769          195 NVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNG  271 (419)
Q Consensus       195 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~  271 (419)
                      .+.   ++++|+++|++  +|+++++|++|..+.+...+   . ..+.   .++++|+||.++.+| .+.||++++.   
T Consensus       195 ~i~---dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~-~~ga---Div~~S~sK~lgg~g~~~gG~i~~~~---  261 (427)
T 3i16_A          195 LIE---DIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---T-DVGA---DLIAGSLIKNIGGGIAPTGGYLAGTK---  261 (427)
T ss_dssp             CHH---HHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---G-GGTC---SEEEEETTSGGGTTTCCSCEEEEECH---
T ss_pred             cHH---HHHHHHHHHHHhCCCCEEEEECCCccccccCCc---c-ccCC---eEEEecCcccCCCCCCceEEEEEECH---
Confidence            775   49999999999  99999999999876543221   1 2222   388999999987766 6789999865   


Q ss_pred             ccchhhHHHHHHhhhc---cccCCch-HH-HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce-
Q 014769          272 IFQKSGIIDSIKDCLS---IYSDIPT-FI-QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS-  345 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~~---~~~~~~~-~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g-  345 (419)
                           ++++.++....   ......+ .. ...+...+     ..+..+.++..+++..+.+.|+++ ++. + .|..+ 
T Consensus       262 -----~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~  328 (427)
T 3i16_A          262 -----DCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGL-----FLAPHISMEALKGAILCSRIMELA-GFE-V-MPKYDE  328 (427)
T ss_dssp             -----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred             -----HHHHHHHHhcccCccCccCCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence                 68888876421   1111111 11 22222222     335566778888889999999987 455 3 33222 


Q ss_pred             ----EEEEeecCcccccCCCCHHHHHHHH
Q 014769          346 ----MVTMVKLNPWLLEDINDDIEFALKL  370 (419)
Q Consensus       346 ----~~~~~~~~~~~~~~~~~~~~~~~~l  370 (419)
                          ..+.+.+...     .....|++.|
T Consensus       329 ~~~~~i~~i~l~~~-----~~~~~f~~~l  352 (427)
T 3i16_A          329 KRSDIIQSIKFNDK-----DKLIEFCKGI  352 (427)
T ss_dssp             CCSSSCEEEECSSH-----HHHHHHHHHH
T ss_pred             CCccEEEEEEECCH-----HHHHHHHHHH
Confidence                2555666421     1244666666

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.90  E-value=3.1e-22  Score=190.68  Aligned_cols=255  Identities=16%  Similarity=0.185  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC-CCCCCcHHHH----------hhcCCEEEE
Q 014769           89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR-PGWPYYEGIA----------QRKQVEVRH  157 (419)
Q Consensus        89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~-p~~~~~~~~~----------~~~g~~~~~  157 (419)
                      .++.+.+.+.+.+|......+++++ |+++|+..++.+++++||+|+++. |.|..+...+          +..|.+++.
T Consensus        66 ~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~  144 (431)
T 3ht4_A           66 GRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA  144 (431)
T ss_dssp             HHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred             hHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence            3555555555545543322333455 668999999999999999999998 9999877544          457889888


Q ss_pred             EeccCCCCcccChHHHHHhhcCCccEEEEe-CCCCccccCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCC
Q 014769          158 FDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTP  234 (419)
Q Consensus       158 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~  234 (419)
                      +++++  ++.+|++.+++++++++++|+++ +|+||+|...+.+++++|+++|++  +|+++|+|++|+.+.++..+.  
T Consensus       145 v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~--  220 (431)
T 3ht4_A          145 VPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC--  220 (431)
T ss_dssp             CCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG--
T ss_pred             eCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc--
Confidence            88754  46799999999999889999999 589999999999999999999999  999999999999877543321  


Q ss_pred             ccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhcc-----ccCCchHHHHHHHHHHcccc
Q 014769          235 MGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-----YSDIPTFIQGAIPQILEKTK  308 (419)
Q Consensus       235 ~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~a~~~~l~~~~  308 (419)
                        .++.   .++++|+||.++. .++..||+++++        ++++.++.....     ..+++.....++...+.   
T Consensus       221 --~~g~---Di~~~S~sK~lgg~~~~~GG~v~~~~--------~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~---  284 (431)
T 3ht4_A          221 --HVGA---DLMAGSLIKNPGGGIVKTGGYIVGKE--------QYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF---  284 (431)
T ss_dssp             --GTTC---SEEEEETTSGGGTTTCSSCEEEEECH--------HHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH---
T ss_pred             --ccCC---eEEEcCccccCCCCCCCceEEEEecH--------HHHHHHHHHhccCCcccccCccHHHHHHHHhHhh---
Confidence              2222   3889999998543 223349999865        677777664321     11121111222333332   


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC---CCCCceEEEEeecCcccccCCCCHHHHHHHHHH
Q 014769          309 EDFFCKLIDTLRESAEICYDGVKEIPCISCP---NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAK  372 (419)
Q Consensus       309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~  372 (419)
                        ....+.++..++...+.+.|+++ ++.+.   ..+..+..+.+.++..     ....+++..+..
T Consensus       285 --~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~~-----~~~~~~~~~l~~  343 (431)
T 3ht4_A          285 --LAPHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDDK-----DRMIAFCQAIQY  343 (431)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCCH-----HHHHHHHHHHHH
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCCH-----HHHHHHHHHHHh
Confidence              24556667778888888888876 44421   1122333555666531     124566666633

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.90  E-value=1.5e-21  Score=197.91  Aligned_cols=308  Identities=10%  Similarity=-0.008  Sum_probs=197.2

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN  165 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  165 (419)
                      ..++++.+++++      +.+ +.+++++|+++++..++.+++++||.|+++.|+|.++...+...|+.+++++...+ +
T Consensus       207 v~~~ee~la~l~------G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~  278 (755)
T 2vyc_A          207 FGESEKYAARVF------GAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-R  278 (755)
T ss_dssp             HHHHHHHHHHHH------TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-T
T ss_pred             HHHHHHHHHHHh------CCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-c
Confidence            357777777776      332 45888999999999999999999999999999999988888889999998886533 2


Q ss_pred             cc----c-----ChHHHHHhhcC--Ccc--------EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-
Q 014769          166 WE----V-----DLDAVEALADK--NTA--------AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-  225 (419)
Q Consensus       166 ~~----~-----~~~~l~~~~~~--~~~--------~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-  225 (419)
                      ++    +     |++.+++++++  +++        ++++++| ||+|.+.+   +++|+++|+++|+++++|++|+.. 
T Consensus       279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~  354 (755)
T 2vyc_A          279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYA  354 (755)
T ss_dssp             TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred             cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhc
Confidence            22    4     89999998864  333        8899998 79999998   899999999999999999999753 


Q ss_pred             ccCCC--CCCCccc--cC-CCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHH
Q 014769          226 TFGSI--PYTPMGL--FG-SIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA  299 (419)
Q Consensus       226 ~~~~~--~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a  299 (419)
                      .+++.  +..++..  .+ ...+++++.|+||.  ++|++ .|++++++.........+.+.+..  ..+.+++.+...+
T Consensus       355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~--~~s~sp~~~~iaa  430 (755)
T 2vyc_A          355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMM--HATTSPLYAICAS  430 (755)
T ss_dssp             GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECCBTCCCHHHHHHHHHH--TSCSSCCHHHHHH
T ss_pred             ccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCcccccCHHHHHHHHHH--hCCCCHHHHHHHH
Confidence            23321  1122211  12 23467899999998  45665 577777653101110112222211  1234566665555


Q ss_pred             HHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC---------CCCCCCCC---------------------------
Q 014769          300 IPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC---------ISCPNKPE---------------------------  343 (419)
Q Consensus       300 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---------~~~~~~p~---------------------------  343 (419)
                      +..+++.......++..+++.++.+.+++.|+++++         +.++ .|.                           
T Consensus       431 l~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (755)
T 2vyc_A          431 NDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTTVQDC  509 (755)
T ss_dssp             HHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHHCGGG
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccchhhh
Confidence            555554322222334445555555555555554433         3211 110                           


Q ss_pred             ----------------ce------EEEEeecCcccccC-----CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769          344 ----------------GS------MVTMVKLNPWLLED-----INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--  394 (419)
Q Consensus       344 ----------------~g------~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--  394 (419)
                                      .+      .-+.+.++.....+     ..+..++...| +++||.+...    ....+|+.+  
T Consensus       510 ~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L-~~~gI~~e~~----~~~~v~~~~~~  584 (755)
T 2vyc_A          510 WVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL-GRHGIVPTRT----TDFQIMFLFSM  584 (755)
T ss_dssp             TBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHH-HTTTCCCSEE----CSSEEEEECCT
T ss_pred             hccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHH-HHCCCEEeec----CCCeEEEEECC
Confidence                            11      12333343211111     12345665555 7799877442    257889998  


Q ss_pred             ecCHHHHHHHHHHHHHHHHHH
Q 014769          395 CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       395 ~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +.++++++.+++.|.++.+.+
T Consensus       585 g~t~~~~~~l~~al~~~~~~~  605 (755)
T 2vyc_A          585 GVTRGKWGTLVNTLCSFKRHY  605 (755)
T ss_dssp             TCCTTTTHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhh
Confidence            468899999999999887765

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.90  E-value=6.1e-22  Score=184.23  Aligned_cols=327  Identities=13%  Similarity=0.034  Sum_probs=219.2

Q ss_pred             CCCChHHHHHHHHHHHhCCCCC---CC-----CC--CCCCHHHHHHHHHHHHhhCCCCCCC-CcEEE-cccHHHHHHHHH
Q 014769           57 CFRTAVEAEDAIVDAVRSGKFN---CY-----AT--NSGIPPARRAIADYLSRDLPYKLSA-DDVYV-TLGCKQAVEVIL  124 (419)
Q Consensus        57 ~~~~~~~v~~a~~~~~~~~~~~---~Y-----~~--~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~-t~g~~~al~~~~  124 (419)
                      ..+.|+.|.+++.+.+.+...+   .+     ++  ..-+.+.|+.+++++      ++++ .+|++ |+|+|++++.++
T Consensus        21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~a~   94 (377)
T 3e77_A           21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL------AVPDNYKVIFLQGGGCGQFSAVP   94 (377)
T ss_dssp             SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEEEESSHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEEEEcCchHHHHHHHH
Confidence            4678999999999877531100   00     00  112356777788887      4443 57888 689999999999


Q ss_pred             HHhcCC--CCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          125 SVLARP--GANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       125 ~~l~~~--gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..+..+  ||+|++..-++++.  ...++..|..+..++.+  .++..+++.++..+++++++|.+++..|.||++.|. 
T Consensus        95 ~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-  171 (377)
T 3e77_A           95 LNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-  171 (377)
T ss_dssp             HHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-
T ss_pred             HhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEchh-
Confidence            998865  89998776666543  33455667666665543  334566677777788889999999888999999994 


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc---chhh
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF---QKSG  277 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~---~~~~  277 (419)
                             +|+++|+++++|.+++.    +..+..+..++     +++.|.+|.+|.+|  +|++++++.....   ..+.
T Consensus       172 -------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~  233 (377)
T 3e77_A          172 -------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPS  233 (377)
T ss_dssp             -------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCG
T ss_pred             -------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCc
Confidence                   36788999999999987    33333344333     35678999987777  7888887542100   0011


Q ss_pred             HHH--HHHhhhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CC--CceEEEEee
Q 014769          278 IID--SIKDCLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPN-KP--EGSMVTMVK  351 (419)
Q Consensus       278 ~~~--~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p--~~g~~~~~~  351 (419)
                      +.+  .........++++....+++.++++..... .++.+.++.+++.+++++.|+++|++.... .+  ..+..+.+.
T Consensus       234 ~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~  313 (377)
T 3e77_A          234 VLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR  313 (377)
T ss_dssp             GGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEE
T ss_pred             hhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEE
Confidence            111  111111234677888888888888765445 688999999999999999999988776211 12  234445556


Q ss_pred             cCcccccCCCC-HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          352 LNPWLLEDIND-DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       352 ~~~~~~~~~~~-~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ++....  ..+ +..++..+ .++||.+.+|..  ..+.+|+|+.  .++++++.+++.|+++++++
T Consensus       314 ~~~~~~--~~~~~~~~l~~l-~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~  375 (377)
T 3e77_A          314 IGNAKG--DDALEKRFLDKA-LELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH  375 (377)
T ss_dssp             ESSTTC--CHHHHHHHHHHH-HHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCC--chhHHHHHHHHH-HHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence            653100  001 13455555 567999988753  3467999994  58999999999999998875

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.89  E-value=5.6e-22  Score=185.58  Aligned_cols=332  Identities=14%  Similarity=0.034  Sum_probs=216.0

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCC--CCCCCHHHHHHHHHHHHhhCCCCCCC-CcEE
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYA--TNSGIPPARRAIADYLSRDLPYKLSA-DDVY  111 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~  111 (419)
                      +++.++.|.      .+.++.|++++.+.+.+..        ....+  -..-+.+.|+.+++++      +++. .+|+
T Consensus        27 ~~yl~~agp------t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll------~~~~~~evi   94 (386)
T 3qm2_A           27 QVFNFSSGP------AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL------NIPSNYKVL   94 (386)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH------TCCTTEEEE
T ss_pred             cCccccCCC------CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEE
Confidence            345555552      3678999999876653210        00111  1356789999999999      5543 4788


Q ss_pred             E-cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEecc-CCCCcccChHHHHHhhcCCccEEEEe
Q 014769          112 V-TLGCKQAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALADKNTAAMVII  187 (419)
Q Consensus       112 ~-t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~i~  187 (419)
                      + |+|+|++++.++..+..+||+|++..-++.+.  ...++..| .+..++.+ +..+..++++.++.++++++++|.++
T Consensus        95 f~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~  173 (386)
T 3qm2_A           95 FCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYC  173 (386)
T ss_dssp             EEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEEC
T ss_pred             EEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEE
Confidence            8 69999999999999999999987655544432  33456668 88888865 12333367778888888889999999


Q ss_pred             CCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          188 NPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       188 ~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      +..|.||++ .|   +++|.     +|+++++|.+++.    |..+..+..++     +.+.|.+|++|.+|  +|++++
T Consensus       174 h~et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v  234 (386)
T 3qm2_A          174 PNETIDGIAIDE---TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIV  234 (386)
T ss_dssp             SEETTTTEECCC---CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEE
T ss_pred             CCcCCcCEecCc---hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEE
Confidence            888899996 77   55553     7999999999986    33334444442     35578999987666  888888


Q ss_pred             eCCCC--cc-chhhHH--HHHHhhhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCC-CCC
Q 014769          267 NDPNG--IF-QKSGII--DSIKDCLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCI-SCP  339 (419)
Q Consensus       267 ~~~~~--~~-~~~~~~--~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~  339 (419)
                      ++...  .. ..+.+.  ..........++++.....++.++++..... .+++..++.+++++++++.|+++ ++ ...
T Consensus       235 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~  313 (386)
T 3qm2_A          235 REDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRND  313 (386)
T ss_dssp             EGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECC
T ss_pred             CHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence            75320  00 001111  1111111223567777777777777764444 68888999999999999999987 44 211


Q ss_pred             CCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          340 NKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       340 ~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ..+  .....+.+.++...     -+.+++.. |.++||.+.+|...  .+.+|+|+.  .++++++.+++.|+++.+++
T Consensus       314 ~~~~~rs~~iv~f~~~~~~-----~~~~~~~~-L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~  385 (386)
T 3qm2_A          314 VAQANRSRMNVPFQLADNT-----LDKVFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH  385 (386)
T ss_dssp             BCGGGBCSSEEEEEESSGG-----GHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHcCceEEEEECCCcc-----ccHHHHHH-HHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            122  22335555665311     13456555 47789998887543  355999994  58999999999999998764

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.89  E-value=3.7e-21  Score=178.37  Aligned_cols=323  Identities=13%  Similarity=0.077  Sum_probs=216.4

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC---C--CC-----CCCCHHHHHHHHHHHHhhCCCCCC-CCcE
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC---Y--AT-----NSGIPPARRAIADYLSRDLPYKLS-ADDV  110 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---Y--~~-----~~g~~~lr~~ia~~l~~~~~~~~~-~~~i  110 (419)
                      .++++|+.|.      .+.++.|++++.+.+.+...+.   |  ..     ..-+.+.|+.+++++      +++ +.+|
T Consensus         4 ~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll------~~~~~~~v   71 (361)
T 3m5u_A            4 MRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY------ELNDDYEV   71 (361)
T ss_dssp             CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH------TCCTTEEE
T ss_pred             cceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceE
Confidence            4678888883      3678999999998765311000   1  11     122456777788887      444 4578


Q ss_pred             EE-cccHHHHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEe
Q 014769          111 YV-TLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII  187 (419)
Q Consensus       111 ~~-t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~  187 (419)
                      ++ |+|+|++++.++..+. +||++++..-+..+  +...++..|.++..++.+....+.++++.  + +++++++|.++
T Consensus        72 ~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~  147 (361)
T 3m5u_A           72 LFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYIC  147 (361)
T ss_dssp             EEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEE
T ss_pred             EEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEe
Confidence            87 9999999999999998 88876433322322  23445677999999987654322244555  3 77889999999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      +..|.||++++.        +++ +|+++++|.+++.    +..+..+..+     .+++.|.+|.+|.+|  +|+++++
T Consensus       148 ~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~~  207 (361)
T 3m5u_A          148 SNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFSNI-----ALFYGGVQKNAGISG--LSCIFIR  207 (361)
T ss_dssp             SEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCTTE-----EEEEEETTTTSSCTT--CEEEEEE
T ss_pred             CCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcccC-----CEEEEechhccCCCc--cEEEEEc
Confidence            888999998772        233 4999999999987    3233333322     267779999987667  8888886


Q ss_pred             CCCCccchhhHHHHHHh--------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhc
Q 014769          268 DPNGIFQKSGIIDSIKD--------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~--------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      +        ++.+.+..              .....++++....+++.++++..... .++...++.+++.+++++.|++
T Consensus       208 ~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~  279 (361)
T 3m5u_A          208 K--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL  279 (361)
T ss_dssp             H--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             H--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence            5        23333321              11223577878778888887754444 5888889999999999999999


Q ss_pred             CCCC-CCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHH
Q 014769          333 IPCI-SCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGR  407 (419)
Q Consensus       333 ~~~~-~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~  407 (419)
                      ++++ .....+.  ....+.+.++..    ..-+.++... |.++||.+.+|...  .+.+|+|+.  .++++++.+++.
T Consensus       280 ~~g~~~~~~~~~~rs~~ivsf~~~~~----~~~~~~~~~~-L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~a  352 (361)
T 3m5u_A          280 SNGFYKGHADKKDRSLMNVSFNIAKN----KDLEPLFVKE-AEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCEF  352 (361)
T ss_dssp             STTSEEESSCGGGBCSSEEEEEESSC----TTHHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHH
T ss_pred             CCCeeeccCCHHHcCCeEEEEECCCc----hhhhHHHHHH-HHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHHH
Confidence            8766 3222221  233455556530    0012355544 47789999887542  356999994  589999999999


Q ss_pred             HHHHHHHH
Q 014769          408 MKAFCQRH  415 (419)
Q Consensus       408 l~~~~~~~  415 (419)
                      |+++.+++
T Consensus       353 l~~~~~~~  360 (361)
T 3m5u_A          353 MKEFQGKY  360 (361)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            99998774

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.85  E-value=1.3e-19  Score=172.17  Aligned_cols=336  Identities=14%  Similarity=0.068  Sum_probs=206.2

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..|.-... .-.-+|.|.+++.+++...... ..+.....++.+.|++.+    +   ..+.|++++++++
T Consensus        84 ~dG~~ylD~~~g~~~~~-lGH~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsE  154 (454)
T 4ao9_A           84 ADGHRYADFIAEYTAGV-YGHSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERF----P---QIEQLRFTNSGTE  154 (454)
T ss_dssp             TTCCEEEESSGGGGTTT-TCSCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred             CCCCEEEEccccHHhhc-ccCCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHH
Confidence            45888999988743221 1235799999999999875331 222233356666666665    1   4689999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc------CCEEEEEeccCCCCcccChHHHHHhhcCC--ccEEEEeC
Q 014769          119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK------QVEVRHFDLLPERNWEVDLDAVEALADKN--TAAMVIIN  188 (419)
Q Consensus       119 al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~i~~  188 (419)
                      |++.+++....  ..++|+....+|++....+...      ......+|.       -|++.+++.+...  ..+.+|+.
T Consensus       155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvE  227 (454)
T 4ao9_A          155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVE  227 (454)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEEC
T ss_pred             HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEec
Confidence            99999988653  3378999999998753222111      112222221       2677887777542  34556667


Q ss_pred             C-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          189 P-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       189 p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      | ....|. ..++++|++|.++|++||+++|+||++.+  ..|... ....++..+.++   +++|.+ ..|+++|.+++
T Consensus       228 Pv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~-a~e~~gv~PDi~---t~gK~l-ggG~Piga~~~  300 (454)
T 4ao9_A          228 PMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHG-LANKLGIRSDLT---TLGKYI-GGGMSFGAFGG  300 (454)
T ss_dssp             SEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTC-HHHHHTCCCSEE---EEEGGG-GTTSSCEEEEE
T ss_pred             cccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcccc-chhccCCCCcEE---Eecccc-CCCCcceeeee
Confidence            7 455665 46789999999999999999999999984  223221 112233333344   577995 56899999998


Q ss_pred             eCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh----cCCCCC
Q 014769          267 NDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK----EIPCIS  337 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~  337 (419)
                      +.        ++++.+...     ...+++.++++..++.+.|+....+.   ..+++.++.+++++.|+    +.+ +.
T Consensus       301 ~~--------ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~-~~  368 (454)
T 4ao9_A          301 RA--------DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPE---AAGALAERGEALRARLNALCANEG-VA  368 (454)
T ss_dssp             CH--------HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHH---HHHHHHHHHHHHHHHHHHHHHHHT-BS
T ss_pred             HH--------HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccC---hhHHHHHHHHHHHHHHHHHHhhCC-CC
Confidence            76        566666432     12355678888888888887644222   22333444444444443    332 21


Q ss_pred             CCCCCCceEEEEeecCcccccCC-----CCH---HHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 014769          338 CPNKPEGSMVTMVKLNPWLLEDI-----NDD---IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       338 ~~~~p~~g~~~~~~~~~~~~~~~-----~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                       .....-|.++.+.+........     .+.   ..+...+ .++||++.|..      .+.+++..++++|+++++.|+
T Consensus       369 -~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-l~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~  440 (454)
T 4ao9_A          369 -MQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHL-LNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIG  440 (454)
T ss_dssp             -CEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHH-HHTTEECCTTC------EEECCTTCCHHHHHHHHHHHH
T ss_pred             -EEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHH-HHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHH
Confidence             1111224344444432111000     011   2344455 45699998743      455566679999999999999


Q ss_pred             HHHHHHhc
Q 014769          410 AFCQRHTK  417 (419)
Q Consensus       410 ~~~~~~~~  417 (419)
                      +++.++..
T Consensus       441 ~~l~~~~a  448 (454)
T 4ao9_A          441 SFIGGHGA  448 (454)
T ss_dssp             HHHHHSGG
T ss_pred             HHHHhccc
Confidence            99988753

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.84  E-value=4.9e-19  Score=176.34  Aligned_cols=304  Identities=13%  Similarity=0.042  Sum_probs=189.2

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER  164 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~  164 (419)
                      -..++++.+|+++      +. ...+++++|++.++..++.+++++||.|+++.++|.++...+...|+.+++++...+ 
T Consensus       196 ~i~eaE~~lA~~f------Ga-~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~-  267 (715)
T 3n75_A          196 PHKEAEQYIARVF------NA-DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRN-  267 (715)
T ss_dssp             HHHHHHHHHHHHH------TC-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBC-
T ss_pred             HHHHHHHHHHHHh------CC-CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccc-
Confidence            3568999999998      22 235677888899999999999999999999999999999999999999998886532 


Q ss_pred             Cccc---------ChHHHHHhhcC--Ccc---EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc-cCC
Q 014769          165 NWEV---------DLDAVEALADK--NTA---AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGS  229 (419)
Q Consensus       165 ~~~~---------~~~~l~~~~~~--~~~---~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~  229 (419)
                      .+++         |++.+++++++  +++   ++++++| ||+|.+.+   +++|.++|++++  +++||+|+... +++
T Consensus       268 ~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~~  341 (715)
T 3n75_A          268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSP  341 (715)
T ss_dssp             TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGSG
T ss_pred             ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccccCC
Confidence            3443         89999998864  233   7999999 99999999   778888887663  79999998653 332


Q ss_pred             CCCCCccccCC---CCc-EEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHH
Q 014769          230 IPYTPMGLFGS---IVP-VITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL  304 (419)
Q Consensus       230 ~~~~~~~~~~~---~~~-~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l  304 (419)
                      . .+....+..   .+. ++++.|+||++  +|+ ..|++.+++.-  .  ...++..... ..+++++.+..+++..++
T Consensus       342 ~-~~~~~al~~g~~aD~vii~~~S~hKtL--~gltqgs~i~v~~~i--~--~~~~~~~~~~-~~STSpsy~~~AsldaA~  413 (715)
T 3n75_A          342 I-YEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDV--N--EETFNEAYMM-HTTTSPHYGIVASTETAA  413 (715)
T ss_dssp             G-GTTSSTTSSSCCTTCEEEEEECHHHHS--SCCTTCEEEEEESCC--C--HHHHHHHHHH-TSCSSCCHHHHHHHHHHH
T ss_pred             c-cccccccccCcCCCEEEEEEecccccc--cCCCCeeEEEeCchh--h--HHHHHHHHHh-hcCCCchHHHHHHHHHHH
Confidence            1 111111211   123 36699999994  444 35888887631  1  1122222222 224566776666666555


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCC------------C----------CceE------EEEe
Q 014769          305 EKTKEDFFCKLIDTLRESAEICYDGVKEIPC------ISCPNK------------P----------EGSM------VTMV  350 (419)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~------------p----------~~g~------~~~~  350 (419)
                      +......-.+..+++.++.+.+++.|+++++      +.++..            |          ..+.      -+.+
T Consensus       414 ~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i  493 (715)
T 3n75_A          414 AMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTL  493 (715)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEE
T ss_pred             HHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEE
Confidence            4322122334556666666666666654432      121110            0          0011      1222


Q ss_pred             ecCcccccC-----CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEE--EeecCHHHHHHHHHHHHHHHHHH
Q 014769          351 KLNPWLLED-----INDDIEFALKLAKEESVIVTPGIYVGLKNWLRI--AFCAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       351 ~~~~~~~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ri--s~~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ..+.....|     ..+...+.+. |+++||.+--..    ...+-+  +++.++++++.+++.|.++-+.+
T Consensus       494 ~~~~~~~~G~~~~~Gi~g~~~~~~-L~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~  560 (715)
T 3n75_A          494 LTPGMEKDGTMSDFGIPASIVAKY-LDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRAF  560 (715)
T ss_dssp             ECSCBCTTSCBCSSCCCHHHHHHH-HHHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCCCccccCCCcHHHHHHH-HHHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence            222211101     1234455544 478899875433    233333  33668889999988888776544

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.82  E-value=3e-18  Score=164.21  Aligned_cols=352  Identities=11%  Similarity=0.035  Sum_probs=212.6

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCC-CHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSG-IPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ..+|+.+|||..|.-.... -.-+|.+.+++.+++....  .|....+ ..+....+|+.|.+..  +.+.+.|++++++
T Consensus        63 D~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sG  137 (473)
T 4e3q_A           63 DVNGRRYLDANSGLWNMVA-GFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVS--PFDSGRVFYTNSG  137 (473)
T ss_dssp             ETTCCEEEETTTTTTTCTT-CSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHS--SCSSCEEEEESSH
T ss_pred             eCCCCEEEEcccCHHHhhc-cCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhC--CCCccEEEEeCch
Confidence            3468899999888543221 2357999999999987632  1222111 1233444555554432  3345789999999


Q ss_pred             HHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC------------EEEEEeccCC---CCcccC----
Q 014769          117 KQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV------------EVRHFDLLPE---RNWEVD----  169 (419)
Q Consensus       117 ~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~~---~~~~~~----  169 (419)
                      ++|++.+++....       ++ .+|+....+|++....+.....            ....++.+..   ......    
T Consensus       138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  217 (473)
T 4e3q_A          138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF  217 (473)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence            9999999987531       33 5788899999875433322111            1222222100   000011    


Q ss_pred             ----hHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          170 ----LDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       170 ----~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                          .+++++.+.   .+..+.+|..| +.-.|. ..+.++++++.++|+++|+++|.||++.+|...|..+ ....++.
T Consensus       218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv  296 (473)
T 4e3q_A          218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDF  296 (473)
T ss_dssp             HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTC
T ss_pred             HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCC
Confidence                123333332   23456677777 455665 4678899999999999999999999999987666433 2233343


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccchHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKEDFF  312 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~  312 (419)
                      .+.++   +++|.++..++++|.+++++        ++.+.+...        ...+++.++++..++.+.|+...++.+
T Consensus       297 ~PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l  365 (473)
T 4e3q_A          297 TPDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGL  365 (473)
T ss_dssp             CCSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSH
T ss_pred             CCChH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccH
Confidence            33444   56799654449999999876        576666432        123567788888888888775332222


Q ss_pred             HHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCcccc-----c-CCCCHHHHHHHHHHhcCeEeecCCC
Q 014769          313 CKLIDTLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLL-----E-DINDDIEFALKLAKEESVIVTPGIY  383 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~-----~-~~~~~~~~~~~ll~~~gv~v~~g~~  383 (419)
                         .+++++..+++.+.|++   .|.+..+  -.-|+++-+.+.....     . .......+...+ .++||++.|.  
T Consensus       366 ---~~~~~~~g~~l~~~L~~l~~~~~v~~v--RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~--  437 (473)
T 4e3q_A          366 ---AENVRRLAPRFEERLKHIAERPNIGEY--RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTC-TDLGLICRPL--  437 (473)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHTTSTTEEEE--EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEEE--
T ss_pred             ---HHHHHHHHHHHHHHHHHHhcCCCeeEE--eecceEEEEEEecCccccccccccHHHHHHHHHHH-HHCCcEEEec--
Confidence               23344444555555544   3333211  1234555555422110     0 001123455555 6679999875  


Q ss_pred             CCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769          384 VGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       384 ~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                         .+.+|+++  ..+++++++++++|++++++..+
T Consensus       438 ---g~~i~l~PPL~it~~eid~~~~~l~~al~~v~a  470 (473)
T 4e3q_A          438 ---GQSVVLCPPFILTEAQMDEMFDKLEKALDKVFA  470 (473)
T ss_dssp             ---TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence               35789887  46899999999999999988765

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.82  E-value=6.8e-18  Score=161.12  Aligned_cols=351  Identities=15%  Similarity=0.114  Sum_probs=209.0

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC--CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC--YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      +|+.+|||..|.-... .-.-+|.+.+++.+++.......  +.+.....++.+.+++..    + .-..+.++++++++
T Consensus        62 dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~sGs  135 (456)
T 4atq_A           62 DGNSFIDLGSGIAVTS-VGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNSGA  135 (456)
T ss_dssp             TSCEEEESSHHHHTCT-TCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESSHH
T ss_pred             CCCEEEEccccHHHHh-cCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCChH
Confidence            4778899988732211 12357999999999887643211  122222234444444443    2 11346799999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-C-------------CEEEEEeccCC----CCcccChHHHH---
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-Q-------------VEVRHFDLLPE----RNWEVDLDAVE---  174 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~~----~~~~~~~~~l~---  174 (419)
                      +|++.+++....  ...+|+....+|++....+... +             ..+..+|....    .....+.+.++   
T Consensus       136 EA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  215 (456)
T 4atq_A          136 EAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAI  215 (456)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHH
Confidence            999999987643  3478999999999865433221 1             12333332110    00011222222   


Q ss_pred             ----HhhcCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEe
Q 014769          175 ----ALADKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG  248 (419)
Q Consensus       175 ----~~~~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  248 (419)
                          ..+..+..+.+|+.| +.-.|. ..++++++++.++|++||+++|+||++.++...|..+ ....++..+.++   
T Consensus       216 ~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---  291 (456)
T 4atq_A          216 TMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPDII---  291 (456)
T ss_dssp             HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCSEE---
T ss_pred             HHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCchh---
Confidence                222334556677777 444565 5678999999999999999999999999976666433 233344333444   


Q ss_pred             cCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Q 014769          249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICY  327 (419)
Q Consensus       249 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  327 (419)
                      +++|.+ ..|+++|.+++++        ++.+.+.... ..+++.++++..++.+.|+...++.+.   ++.++..+++.
T Consensus       292 t~gK~l-ggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~---~~~~~~g~~l~  359 (456)
T 4atq_A          292 TMAKGI-AGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLN---GRARHIEELAL  359 (456)
T ss_dssp             EECGGG-GTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHH
T ss_pred             hhhhcc-cCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHH---HHHHHHHHHHH
Confidence            567994 5789999999876        5666554432 346778888888888888764333222   23333333333


Q ss_pred             HHhh----cCCC--CCCCCC-CCceEEEEeecCccccc--CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ec
Q 014769          328 DGVK----EIPC--ISCPNK-PEGSMVTMVKLNPWLLE--DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CA  396 (419)
Q Consensus       328 ~~l~----~~~~--~~~~~~-p~~g~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~  396 (419)
                      +.|+    +++.  ..++.. -.-|+++-+.+......  .......+...+ .++|+++.++..+  .+.+||.+  ..
T Consensus       360 ~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~-~~~Gvl~~~~g~~--~~~irl~PpL~i  436 (456)
T 4atq_A          360 GKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAAC-LKEGVIILTCGTY--GNVIRLLPPLVI  436 (456)
T ss_dssp             HHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECEEECTT--SCEEEECCCTTC
T ss_pred             HHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHH-HHCCCEEEecCCC--CCEEEEECCCCC
Confidence            3333    2321  111111 12355666666321100  000123455555 5679998875432  46899997  46


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 014769          397 EPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       397 ~~~~l~~~l~~l~~~~~~~  415 (419)
                      +++++++++++|+++++.+
T Consensus       437 t~~~id~~l~~l~~al~a~  455 (456)
T 4atq_A          437 SDELLIDGLEVLAAAIKAH  455 (456)
T ss_dssp             CHHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHhh
Confidence            8999999999999999865

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.76  E-value=1.2e-16  Score=148.19  Aligned_cols=305  Identities=12%  Similarity=0.056  Sum_probs=192.8

Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC----CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCccc
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP----GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEV  168 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~  168 (419)
                      .+|++. .|++ .....++++|+|.++..++.+.+++    +|.|+++..+|.++...+...|+.+++++... ++...+
T Consensus       123 ld~L~~-~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~i  200 (501)
T 3hl2_A          123 LDIIKL-AGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRT  200 (501)
T ss_dssp             HHHHHH-TTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEE
T ss_pred             HHHHHH-cCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCC
Confidence            344444 4655 3346899999998887777777663    49999999999999999999999999887522 235789


Q ss_pred             ChHHHHHhhcC---CccEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccC-CCC
Q 014769          169 DLDAVEALADK---NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFG-SIV  242 (419)
Q Consensus       169 ~~~~l~~~~~~---~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~-~~~  242 (419)
                      |++.+++++++   +..++++++| .|..+.+-+   +++|+++|++||+++++|+||+... +....+.....++ .+ 
T Consensus       201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD-  276 (501)
T 3hl2_A          201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID-  276 (501)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC-
T ss_pred             CHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc-
Confidence            99999998865   2344455554 443445566   9999999999999999999998633 1111111112233 32 


Q ss_pred             cEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCC-chHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI-PTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                        +++.|.+|.+..+ +..|.+..++       +++++++....  .+.. ..++.......+. ...+.+++..++..+
T Consensus       277 --~vVqS~HK~llvp-IGG~ii~~~d-------~e~l~~~~~~y--PGr~S~Spsldl~~tLL~-lGr~Gy~~ll~e~~e  343 (501)
T 3hl2_A          277 --AFVQSLDKNFMVP-VGGAIIAGFN-------DSFIQEISKMY--PGRASASPSLDVLITLLS-LGSNGYKKLLKERKE  343 (501)
T ss_dssp             --EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHHTS--CSCBCSHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             --EEEecccccceee-cCceEEEeCC-------HHHHHHHHHhC--CCCCCCcHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence              6777999996554 3334444544       24555553322  1222 2222222222333 234667788888888


Q ss_pred             HHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCe----EeecCC----------CC
Q 014769          322 SAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV----IVTPGI----------YV  384 (419)
Q Consensus       322 ~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv----~v~~g~----------~~  384 (419)
                      +.+++++.|+++   -+-.....|....-+-+.+.....+.. .....+..+|...+|    .|.+|.          .|
T Consensus       344 la~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~-~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~  422 (501)
T 3hl2_A          344 MFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD-KAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGF  422 (501)
T ss_dssp             HHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTS-CHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESST
T ss_pred             HHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccccc-ccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCc
Confidence            888888888763   234434456555555555653211111 123333444455566    244555          45


Q ss_pred             CC------CCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          385 GL------KNWLRIAF--CAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       385 ~~------~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                      +.      ..|+-++.  +.+++|++.++++|++++.++.++
T Consensus       423 g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~  464 (501)
T 3hl2_A          423 MSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE  464 (501)
T ss_dssp             TTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             ccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            43      35777776  579999999999999999998765

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.75  E-value=5.6e-18  Score=172.92  Aligned_cols=346  Identities=13%  Similarity=0.059  Sum_probs=205.1

Q ss_pred             CeeeccCCCCCCCCCCC-C-hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHH
Q 014769           43 PVVPLGYGDPTAFPCFR-T-AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQA  119 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~-~-~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~a  119 (419)
                      .++|+..|.-+..  ++ - +|++.+|+.+++.......+..  ...+....+++.|.+..+  -+ .+.+++++++++|
T Consensus       381 ~ylD~~sg~~~~~--lGh~~~p~i~~Ai~~Q~~~l~h~~~~~--~~~~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA  454 (831)
T 4a0g_A          381 QQFDACASWWTQG--PDPTFQAELAREMGYTAARFGHVMFPE--NVYEPALKCAELLLDGVG--KGWASRVYFSDNGSTA  454 (831)
T ss_dssp             EEEETTHHHHTCC--CCHHHHHHHHHHHHHHHHHHSSCCCTT--EECHHHHHHHHHHHHTTT--TTTCCEEEEESSHHHH
T ss_pred             heeeecccHhhcC--CCCCCCHHHHHHHHHHHhhcccccccc--cCCHHHHHHHHHHHHhCC--CCCCCEEEECCChhHH
Confidence            6788887732222  23 3 7999999999986522111111  112333455555544222  12 4689999999999


Q ss_pred             HHHHHHHhc-----CCC------------CeEEeeCCCCCCcHHHHhhc-CC---------------EE-----------
Q 014769          120 VEVILSVLA-----RPG------------ANVLLPRPGWPYYEGIAQRK-QV---------------EV-----------  155 (419)
Q Consensus       120 l~~~~~~l~-----~~g------------d~vlv~~p~~~~~~~~~~~~-g~---------------~~-----------  155 (419)
                      ++.+++...     .+|            .+|+....+|++....+... |.               .+           
T Consensus       455 ~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  534 (831)
T 4a0g_A          455 IEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSN  534 (831)
T ss_dssp             HHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEET
T ss_pred             HHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccC
Confidence            999988762     122            36888899998753332222 11               00           


Q ss_pred             --EEEeccCC------CCccc-C------------------hHHHHHhhc-------CCccEEEEeCC--CCccccC-CC
Q 014769          156 --RHFDLLPE------RNWEV-D------------------LDAVEALAD-------KNTAAMVIINP--GNPCGNV-FT  198 (419)
Q Consensus       156 --~~~~~~~~------~~~~~-~------------------~~~l~~~~~-------~~~~~v~i~~p--~nptG~~-~~  198 (419)
                        ..++.+..      +.... +                  .+.|++.+.       ....+.+++.|  ++..|.. +|
T Consensus       535 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~  614 (831)
T 4a0g_A          535 GSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD  614 (831)
T ss_dssp             TEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred             CceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence              11122110      00000 1                  245666664       23455677777  5777764 68


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhh
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~  277 (419)
                      .+++++|.++|++||+++|+||++.++...|..+ ....++..++++   +++|.++. | +++|++++++        +
T Consensus       615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~--------~  681 (831)
T 4a0g_A          615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD--------A  681 (831)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------H
T ss_pred             HHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------H
Confidence            9999999999999999999999999987766544 233333333333   68999654 6 8999999976        5


Q ss_pred             HHHHHHhh-------hccccCCchHHHHHHHHHHcccchHHHHHHH----HHHHH-HHHHHHHHhhcCCCCCCCCCCCce
Q 014769          278 IIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLI----DTLRE-SAEICYDGVKEIPCISCPNKPEGS  345 (419)
Q Consensus       278 ~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~----~~~~~-~~~~l~~~l~~~~~~~~~~~p~~g  345 (419)
                      +++.+...       ...+++.+++++.++.+.|+....+.+.++.    +++++ ..+.+.+.+.+.|.+..+ . ..|
T Consensus       682 i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~v-r-g~G  759 (831)
T 4a0g_A          682 VFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRV-V-VIG  759 (831)
T ss_dssp             HHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEE-E-EET
T ss_pred             HHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeE-e-ecc
Confidence            77766532       2245677888888888777642211111111    11111 012344445555544422 2 335


Q ss_pred             EEEEeecCccccc-C--CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          346 MVTMVKLNPWLLE-D--INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       346 ~~~~~~~~~~~~~-~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .+..+.+...... .  .....++...+ .++||++.|+     .+.+|+++  ..++++|++++++|.++++++
T Consensus       760 l~~~iel~~~~~~~~~~~~~a~~~~~~l-~e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l  828 (831)
T 4a0g_A          760 TLFALELKADASNSGYASLYAKSLLIML-REDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF  828 (831)
T ss_dssp             TEEEEEEC---------CHHHHHHHHHH-HHTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred             cEEEEEEecCccccccchHHHHHHHHHH-HHCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5666666421000 0  00133555555 5689999886     36899996  579999999999999998764

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.74  E-value=7.7e-16  Score=142.05  Aligned_cols=365  Identities=12%  Similarity=0.033  Sum_probs=218.4

Q ss_pred             hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHH
Q 014769           19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRA   92 (419)
Q Consensus        19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~   92 (419)
                      ......|.+++++-..+.     ..-|+|=-..      --.++.+.+++...+.+....+      |+..+-+.+++..
T Consensus        36 ~~~Dpei~~~i~~E~~RQ-----~~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~l  104 (490)
T 3ou5_A           36 SDSDPEMWELLQREKDRQ-----CRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELL  104 (490)
T ss_dssp             HHHCHHHHHHHHHHHHHH-----HHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHHHHH-----HcCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHH
Confidence            344556677776544432     2335543332      2357888888776665533223      3334444567766


Q ss_pred             HHHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH--------HhhcC--CEEEEEecc
Q 014769           93 IADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI--------AQRKQ--VEVRHFDLL  161 (419)
Q Consensus        93 ia~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~--------~~~~g--~~~~~~~~~  161 (419)
                      ..+..++.+|.....-.| +--.+++.|+..++.++++|||+|+..+..+.++..-        ....|  .+...++++
T Consensus       105 a~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd  184 (490)
T 3ou5_A          105 CQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN  184 (490)
T ss_dssp             HHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEE
T ss_pred             HHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccC
Confidence            666776666643211112 3346778899999999999999999988877654211        11112  234445555


Q ss_pred             CCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccC
Q 014769          162 PERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFG  239 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~  239 (419)
                      ++ +..+|.|.+++.... +|++|+.-.-.+|  ..++   ++++.++|++.|.++++|.+|-.. +-+|..+.|+ .+ 
T Consensus       185 ~~-t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~-~~-  256 (490)
T 3ou5_A          185 PK-TGLIDYNQLALTARLFRPRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-KH-  256 (490)
T ss_dssp             TT-TTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG-GT-
T ss_pred             CC-CCcccHHHHHHHHhhcCCCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcc-cc-
Confidence            44 457999999887655 5666655433343  3455   888999999999999999999654 3344333333 33 


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc-------hhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ-------KSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKED  310 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-------~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~  310 (419)
                      .+   ++.+|++|+  ++|.|.|.+.+++...-..       ..++.+++.....  ..+++......+.+.++.+-...
T Consensus       257 AD---vVTtTTHKT--LrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p  331 (490)
T 3ou5_A          257 AD---IVTTTTHKT--LRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP  331 (490)
T ss_dssp             CS---EEEEESSST--TCSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSH
T ss_pred             ce---EEecccccc--ccCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhH
Confidence            22   778899998  6899999999876310000       0035566666532  23344433444444444443345


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cCCC-CC
Q 014769          311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PGIY-VG  385 (419)
Q Consensus       311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~-~~  385 (419)
                      .+.+...++.++.+.|.+.|.+. |+.++........+++++.....    + -..++++|++.||.+.    |+.. ..
T Consensus       332 ~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlvLvDl~~~g~----t-G~~ae~~Le~agItvNkN~iP~D~sp~  405 (490)
T 3ou5_A          332 MFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGL----D-GARAERVLELVSITANKNTCPGDRSAI  405 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC----C-HHHHHHHHHHTTEECEEECCTTCCCSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEEEEeccccCC----C-HHHHHHHHHHcCcEECCCCCCCCCCCC
Confidence            67788889999999999999987 88866445556677777754321    2 3445677789999885    3331 11


Q ss_pred             CCCeEEEEe------ecCHHHHHHHHHHHHHHHH
Q 014769          386 LKNWLRIAF------CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       386 ~~~~~Ris~------~~~~~~l~~~l~~l~~~~~  413 (419)
                      .+..|||+.      +..++++++..+.|.+++.
T Consensus       406 ~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~  439 (490)
T 3ou5_A          406 TPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             SCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            256899998      2467889888888887764

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.69  E-value=2.5e-15  Score=141.28  Aligned_cols=316  Identities=11%  Similarity=0.010  Sum_probs=187.9

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC----CCeEEeeCCCCCCcHHHHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP----GANVLLPRPGWPYYEGIAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~  160 (419)
                      +...+.+.+..++.+..|.+ +....++++|+|.+...++.+.+++    ++.|+++..+|.++...+...|+.+++++.
T Consensus        95 ~~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~  173 (450)
T 3bc8_A           95 LLNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN  173 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence            35567777777777766653 2345688888875554444444443    899999999999999999999999988875


Q ss_pred             cC-CCCcccChHHHHHhhcC---CccEEEEeCCC-CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-C
Q 014769          161 LP-ERNWEVDLDAVEALADK---NTAAMVIINPG-NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-P  234 (419)
Q Consensus       161 ~~-~~~~~~~~~~l~~~~~~---~~~~v~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~  234 (419)
                      .+ +....+|++.|++++.+   +.+++++.+|+ +.+|.+-+   +++|+++|++||+++++|++|+.........+ .
T Consensus       174 ~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~  250 (450)
T 3bc8_A          174 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ  250 (450)
T ss_dssp             EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHH
T ss_pred             eecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHH
Confidence            33 23568999999999865   24566777774 45667777   99999999999999999999986321100000 1


Q ss_pred             cccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHH
Q 014769          235 MGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       235 ~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                      .... ..+   .++.|.+|++ ......+++.++++       +..+.+....... ..++++......++.. ..+.+.
T Consensus       251 a~~~~~AD---~~v~S~HK~l-~a~~~~~~l~~rd~-------~~~~~~~~~~~g~-~s~SpsL~l~~~l~~~-G~~g~~  317 (450)
T 3bc8_A          251 GARVGRID---AFVQSLDKNF-MVPVGGAIIAGFNE-------PFIQDISKMYPGR-ASASPSLDVLITLLSL-GCSGYR  317 (450)
T ss_dssp             HHHHSCCC---EEEEEHHHHH-SCCSSCEEEEESCH-------HHHHHHHHHSCSC-BCSHHHHHHHHHHHHH-HHHHHH
T ss_pred             HhcccCCC---EEEECCccCC-CchhccEEEEecCH-------HHHHHHHHHhhcC-CcccHHHHHHHHHHHH-HHHHHH
Confidence            0111 122   5667999994 44555677776542       3455544332111 1122333333333332 245566


Q ss_pred             HHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcC---eEeec-------
Q 014769          314 KLIDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES---VIVTP-------  380 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g---v~v~~-------  380 (419)
                      +..++..++.+++++.|++++   ++.+...+..+.-..+.++........|...+...+ ...|   ..+.+       
T Consensus       318 ~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~  396 (450)
T 3bc8_A          318 KLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTV  396 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccch
Confidence            666666677777777776655   665433332211111222211000001334444444 3333   33331       


Q ss_pred             -CC---CCC------CCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769          381 -GI---YVG------LKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       381 -g~---~~~------~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                       |.   .|+      ...++-+.+  +.+++++++++++|+++++++.++
T Consensus       397 ~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~  446 (450)
T 3bc8_A          397 SGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE  446 (450)
T ss_dssp             TTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence             01   111      134555555  578999999999999998877654

>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*

Probab=84.68  E-value=5  Score=38.41  Aligned_cols=114  Identities=16%  Similarity=0.280  Sum_probs=69.8

Q ss_pred             CCCCCCCCcEEEcccHHHHHHHHHHHhcC---C---------C-C-----eEEeeCCCCCC-------------------
Q 014769          101 LPYKLSADDVYVTLGCKQAVEVILSVLAR---P---------G-A-----NVLLPRPGWPY-------------------  143 (419)
Q Consensus       101 ~~~~~~~~~i~~t~g~~~al~~~~~~l~~---~---------g-d-----~vlv~~p~~~~-------------------  143 (419)
                      +.+.++++.|.|+.++..++.-.+++|.+   .         | .     ..+...|.|.-                   
T Consensus       124 Y~L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~  203 (525)
T 3gh5_A          124 YDLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKR  203 (525)
T ss_dssp             EEEEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHH
T ss_pred             eEEEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHH
Confidence            33456677898988877777766666532   1         1 1     13455666641                   


Q ss_pred             cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769          144 YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA  218 (419)
Q Consensus       144 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  218 (419)
                      +.+.+..+++++..+.+..+.+|.+..+...++-.....    .....+.|-.++.+++++|++.|+++++-||-
T Consensus       204 ~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP  274 (525)
T 3gh5_A          204 QIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP  274 (525)
T ss_dssp             HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred             HHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence            134455567777777777666777665544332211110    00112345679999999999999999987663

>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22

Probab=83.93  E-value=12  Score=29.31  Aligned_cols=102  Identities=9%  Similarity=0.032  Sum_probs=63.9

Q ss_pred             cEEEcccHHHHHHHHHHH---hcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          109 DVYVTLGCKQAVEVILSV---LAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       109 ~i~~t~g~~~al~~~~~~---l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      +|+....+...+..++-.   +..  .+..|+...|-+..+...+...|++...+-+....+..-.+..++++++.....
T Consensus        48 Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~~~  127 (161)
T 1oft_A           48 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH  127 (161)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTCEE
T ss_pred             EEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCCcc
Confidence            566554444444433333   332  567788888888889999999997643222221112122356678889888877


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVM  215 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~  215 (419)
                      +++..+..     ++..+++++---++..+..
T Consensus       128 aVl~Wl~~-----l~~~~~RRLqlAAe~g~~~  154 (161)
T 1oft_A          128 TVVSWLEP-----LSRAARKQLSRAAQLGQAQ  154 (161)
T ss_dssp             EEEECCSS-----CCHHHHHHHHHHHHHTTCE
T ss_pred             EEEECCCc-----CChHHHHHHHHHHHhCCCe
Confidence            78877542     6777788888777776654

>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22

Probab=82.23  E-value=8.4  Score=28.56  Aligned_cols=102  Identities=9%  Similarity=0.015  Sum_probs=63.9

Q ss_pred             cEEEcccHHHHHHHHHH---HhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          109 DVYVTLGCKQAVEVILS---VLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       109 ~i~~t~g~~~al~~~~~---~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      +++....+...+..++-   .+.+  .+..|+...|.+..+...+...|++...+-+....+..-.+..++++++.....
T Consensus         6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~   85 (119)
T 1ofu_X            6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH   85 (119)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred             EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCcc
Confidence            44554444444444443   3443  567788888888889999998997643322222222122356678888887777


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVM  215 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~  215 (419)
                      +++..+..     ++..+.+++--.+++.+..
T Consensus        86 aVl~wl~~-----l~~~~~RRLqlAA~~g~~~  112 (119)
T 1ofu_X           86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQ  112 (119)
T ss_dssp             EEEECCSS-----CCHHHHHHHHHHHHHHTCE
T ss_pred             EEEECCCc-----CChHHHHHHHHHHHhCCCe
Confidence            77777543     6777788888777776654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	419
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	2e-68
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	8e-64
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	9e-59
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	5e-51
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	2e-46
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	7e-40
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	1e-39
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	8e-35
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	7e-34
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	2e-32
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-31
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	9e-31
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	5e-30
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	2e-28
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	2e-28
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	5e-27
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	1e-26
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	2e-26
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	1e-25
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	9e-25
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	1e-23
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	5e-23
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	5e-23
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	2e-17
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	1e-16
d1fg7a_	354	c.67.1.1 (A:) Histidinol-phosphate aminotransferas	2e-08
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	0.002

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  219 bits (559), Expect = 2e-68
 Identities = 85/377 (22%), Positives = 156/377 (41%), Gaps = 20/377 (5%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
           K +   V     G+P     F T     +A   A+  GK   Y   +G P  R AIA  L
Sbjct: 26  KAEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQGKTR-YGPAAGEPRLREAIAQKL 80

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
            RD      AD++ VT G KQ++  ++  +  PG  V++P P W  Y  + +  +     
Sbjct: 81  QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVI 140

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
                E  ++V  + +       T  +V   P NP G V+T   ++ IA++A +  + V+
Sbjct: 141 LPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVL 200

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275
           +DE+Y  + +    +  +G          +     +K + + GWR G+L    P      
Sbjct: 201 SDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPL----- 255

Query: 276 SGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC 335
             +  + K      S++ TF Q       E + +D   +++    E      D +  +P 
Sbjct: 256 --VKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPG 312

Query: 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC 395
           + CP KP+G+      +     +     ++F  +L  +  V   PG   G  + +R+++ 
Sbjct: 313 LECP-KPDGAFYMFPSIA----KTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA 367

Query: 396 AEPSALKDGLGRMKAFC 412
            +   +K G+ R++ F 
Sbjct: 368 TDLDTIKRGMERLEKFL 384

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  207 bits (528), Expect = 8e-64
 Identities = 79/375 (21%), Positives = 146/375 (38%), Gaps = 21/375 (5%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
           +     +V L  G+P     F T    ++A   A+  GK   YA  +GIP  R A+A+  
Sbjct: 27  RRQGVDLVALTAGEPD----FDTPEHVKEAARRALAQGKTK-YAPPAGIPELREALAEKF 81

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
            R+    ++ ++  VT+G  QA+  +   +  PG  V++  P W  Y  + +     V  
Sbjct: 82  RRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVE 141

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
            + LPE  +  D + V       T A+V+ +P NP G V+    L+ +A +A +    +V
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
           +DE+Y HL +    ++P  +       +T+   +K + + GWR G+              
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPE--HTLTVNGAAKAFAMTGWRIGYACGPKE-------- 251

Query: 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337
           +I ++       +  P  I           +E     +              ++ +  + 
Sbjct: 252 VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALG 311

Query: 338 CP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCA 396
               +P G+   ++  +P     I  D   A +   E  V V PG        +R+++  
Sbjct: 312 LKAVRPSGAFYVLMDTSP-----IAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYAT 366

Query: 397 EPSALKDGLGRMKAF 411
               L+  L R    
Sbjct: 367 SEENLRKALERFARV 381

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  194 bits (494), Expect = 9e-59
 Identities = 82/378 (21%), Positives = 149/378 (39%), Gaps = 21/378 (5%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
           + V+ LG G+P     F T    ++   +A+  G    Y  N G+   R AIA+ L +  
Sbjct: 25  KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQN 79

Query: 102 PYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL 160
             +     ++ V LG  QA  + LS   + G  VL+P P +  Y         +      
Sbjct: 80  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139

Query: 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220
             E  + +++D ++      T A++I +P NP G V T   L+EIA+   +  ++V++DE
Sbjct: 140 YEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDE 199

Query: 221 VYGHLTFGSIPYTPM-GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279
           VY H  +    +  +  L G     IT+   SK + + GWR G++          +  + 
Sbjct: 200 VYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSW---IIERMVK 256

Query: 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP 339
             + +     + I      A+         +   K  D             +        
Sbjct: 257 FQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYD-----RRRKLVWKRLNEMGLPT 311

Query: 340 NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAE 397
            KP+G+     ++    L       +F+  + KE  V V PG   G   + ++RI++   
Sbjct: 312 VKPKGAFYIFPRIRDTGL----TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATA 367

Query: 398 PSALKDGLGRMKAFCQRH 415
              L++ + RM+   +  
Sbjct: 368 YEKLEEAMDRMERVLKER 385

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  174 bits (442), Expect = 5e-51
 Identities = 99/378 (26%), Positives = 169/378 (44%), Gaps = 12/378 (3%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
           +     V+ L  GDP  F  F+     ++A   A++ G  N Y  + G+P  R+AI +  
Sbjct: 26  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVERE 83

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
            R     ++ DDV VT    +A+++I   L  PG  +L+P P +P Y G+ +    +   
Sbjct: 84  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 143

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
           +  + E +W+ D+D +       T A+ +INP NP G ++    L+EI  +A +  + V+
Sbjct: 144 YRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 203

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
           +DE+Y  +T+     +P       VPVI +  +SK +   GWR G++   DP     +  
Sbjct: 204 SDEIYDLMTYEGEHISPG-SLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE-- 260

Query: 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337
           + ++I     I     T  Q A    L     D+  + +  L+E  +  Y  + EIP IS
Sbjct: 261 VREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGIS 319

Query: 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC 395
              KP+G+     K+    +    +D EF L +     V+   G   G       R  F 
Sbjct: 320 T-TKPQGAFYIFPKIE---VGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 375

Query: 396 AEPSALKDGLGRMKAFCQ 413
                L++ + R + F +
Sbjct: 376 PPIEILEEAMDRFEKFMK 393

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  163 bits (413), Expect = 2e-46
 Identities = 53/453 (11%), Positives = 122/453 (26%), Gaps = 81/453 (17%)

Query: 9   WGFEDKQEHKAAPAVTVKTSLASIIDSVNKND-------------------PRPVVPLGY 49
           W  +  +E +A   +       + +D +                             +  
Sbjct: 4   WTMKAAEEAEAVANINCSEHGRAFLDGIISEGSPKCECNTCYTGPDCSEKIQGCSADVAS 63

Query: 50  GDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI--PPARRAIADYLSRDLPYKLSA 107
           GD      +    +   A++ +        +   S        + I +          +A
Sbjct: 64  GDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVV--GNAAA 121

Query: 108 DDVYVTLGC--KQAVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVEVRH 157
            D Y+  G    Q +  ++  L+         P + V+   P +P +    +        
Sbjct: 122 KDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTK-------- 173

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
           +       W  +      +++      ++ +P NP G +   H + +            +
Sbjct: 174 YFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLL--RHAVIKG--------CKSI 223

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
            D VY    +  I Y            I L ++SK     G RFGW +  D +       
Sbjct: 224 YDMVYYWPHYTPIKYKAD-------EDILLFTMSKFTGHSGSRFGWALIKDESVYNNL-- 274

Query: 278 IIDSIKDCLSIYSDIPTFIQGAIPQILE----------KTKEDFFCKLIDTLRESAEICY 327
               +          P   Q    ++L+           T  D        LRE      
Sbjct: 275 ----LNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNIT 330

Query: 328 DGVKEIPCISCPNKPEGSMVTMVKL------NPWLLEDINDDIEFALKLAKEESVIVTPG 381
             + +    S    P+       +       +   ++   ++ +   +  +   +    G
Sbjct: 331 ALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNG 390

Query: 382 IYVGL-KNWLRIAFCAEPSALKDGLGRMKAFCQ 413
           +       ++R++           +  +K   +
Sbjct: 391 VGFEASSRYVRLSLIKTQDDFDQLMYYLKDMVK 423

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score =  144 bits (363), Expect = 7e-40
 Identities = 78/375 (20%), Positives = 146/375 (38%), Gaps = 25/375 (6%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
                 V+ L  G+P     F T     +  V  ++ G+   Y    GI   R  IA  +
Sbjct: 24  IKKGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGEVK-YTDPRGIYELREGIAKRI 78

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
                  +S D V VT G KQA+      L  PG  V++  P W  Y          V  
Sbjct: 79  GERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNV 138

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
            +    +N++  L+ VE L    T A++I +P NP G V+    L+ +  +A+K    ++
Sbjct: 139 VETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYII 198

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
           +DEVY  L +     + + +      ++ +   SK   + GWR G+L++++         
Sbjct: 199 SDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVS-- 256

Query: 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337
                   +  ++            +     ++ +       R++  +       +  + 
Sbjct: 257 -------KIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFV- 308

Query: 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE 397
              +PEG+     K+         DD++F  +L +E+ V + PG       ++R++F   
Sbjct: 309 ---EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATS 358

Query: 398 PSALKDGLGRMKAFC 412
              L + L R++ F 
Sbjct: 359 IERLTEALDRIEDFL 373

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  144 bits (363), Expect = 1e-39
 Identities = 111/398 (27%), Positives = 198/398 (49%), Gaps = 14/398 (3%)

Query: 29  LASIIDSVNKN-DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87
           + ++ D+   +  P+P++ L  GDPT      T+      + +A+ S + N Y    G P
Sbjct: 16  IRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP 75

Query: 88  PARRAIADYLSR------DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW 141
            AR A+A +         +L   +  D+V +  G    + + ++ +   G   L+P+PG+
Sbjct: 76  EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGF 135

Query: 142 PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201
           P+YE + +   + +  ++  PE +WE DLD +  L D  T  +++ NP NPCG+ F+  H
Sbjct: 136 PHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKH 195

Query: 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL----FGSIVPVITLGSISKRWLVP 257
           +++I  +A +LR+ + +DE+Y  + F              F + VP + LG  +K  +VP
Sbjct: 196 VEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVP 255

Query: 258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317
           GWR GWL+  DP+G       ++ +K    +     T +Q A+ + L  T ++   +++ 
Sbjct: 256 GWRLGWLLYVDPHGNGPS--FLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVA 313

Query: 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVI 377
            + ESA   Y+ + E   ++    P G+M  M +++     DI  D+EF  KL +EE+V 
Sbjct: 314 KIEESAMYLYNHIGECIGLAP-TMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQ 372

Query: 378 VTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415
           V PG       + R+         ++ + R+KAFCQRH
Sbjct: 373 VLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRH 410

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 8e-35
 Identities = 71/398 (17%), Positives = 133/398 (33%), Gaps = 35/398 (8%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-KFNCYATNSGIPPARRAIADYLSRD 100
             VV LG G P     F     A +A   AV      N Y    G PP  + +A +    
Sbjct: 25  HDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 80

Query: 101 LPYKLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD 159
           L  ++     V VT+G   A+      L   G  V++  P +  YE +            
Sbjct: 81  LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVS 140

Query: 160 LLP----------ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
           L P            NW++D   +       T A+V+  P NP G VF+   L+ +A + 
Sbjct: 141 LKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLC 200

Query: 210 RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTND 268
           ++  V+ + DEVY  + +    +  +     +    +T+GS  K +   GW+ GW     
Sbjct: 201 QQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGW---VL 257

Query: 269 PNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328
                 K              +     +  +  +     ++     +           + 
Sbjct: 258 GPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHM 317

Query: 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLE--------DINDDIEFALKLAKEESVIVTP 380
                     P  P+GS   +  ++ +  +        D   D  F   + K + ++  P
Sbjct: 318 IRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIP 377

Query: 381 GIYVG-------LKNWLRIAFCAEPSALKDGLGRMKAF 411
                         +++R  F  + + L+    +++ +
Sbjct: 378 VSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKW 415

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score =  128 bits (323), Expect = 7e-34
 Identities = 66/359 (18%), Positives = 126/359 (35%), Gaps = 31/359 (8%)

Query: 80  YATNSGIPPARRAIADYLS--RDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137
           +    G+P  ++A+ D+++  R        + + +T G   A E  +  LA PG  VL+P
Sbjct: 80  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIP 139

Query: 138 RPGWP-YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPG 190
            P +P +   +  R  VE+          +++   A+E    +          +++ NP 
Sbjct: 140 TPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPS 199

Query: 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM----------GLFGS 240
           NP G   T + L  +        + +++DE+Y    F S  +  +               
Sbjct: 200 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 259

Query: 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAI 300
              V  + S+SK   +PG+R G + +ND   +              S             
Sbjct: 260 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAA-------ATKMSSFGLVSSQTQHLLS 312

Query: 301 PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED- 359
             + +K     +        +  +       +   ISC       +   V +   L  + 
Sbjct: 313 AMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCL-NGNAGLFCWVDMRHLLRSNT 371

Query: 360 INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSA-LKDGLGRMKAFCQRH 415
              ++E   K+  E  + ++PG         W R+ F   P   L   + R+KAF   +
Sbjct: 372 FEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 430

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score =  124 bits (311), Expect = 2e-32
 Identities = 84/405 (20%), Positives = 149/405 (36%), Gaps = 34/405 (8%)

Query: 30  ASIIDSVNKNDPRP-VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNS 84
           AS +  + K      V+ L  G   P  FP        +   V+ +     K   Y T  
Sbjct: 16  ASEVRELLKLVETSDVISLAGGLPAPETFP----VETIKKIAVEVLEEHADKALQYGTTK 71

Query: 85  GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY 144
           G  P R A+A ++ +     +S  ++    G +QA+++I  V   PG  +++  P +   
Sbjct: 72  GFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAA 131

Query: 145 EGIAQRKQVEVRHFDLLPE----RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200
               +    E     L  +       E  L+ +     +      +    NP G   +  
Sbjct: 132 IQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVD 191

Query: 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260
             +++ E+A +   ++V D  Y  L +   P  P+  F     VI LG+ SK  L PG+R
Sbjct: 192 RRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFR 250

Query: 261 FGWLVTNDP--NGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT 318
            GW+  +      +      ID   +             G + + + K  E +  +    
Sbjct: 251 IGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAM 310

Query: 319 LRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIV 378
           L    E   +GV+         KPEG M   V L   +      D +  ++ A  + V  
Sbjct: 311 LEALEEYMPEGVE-------WTKPEGGMFVRVTLPEGI------DTKLMMERAVAKGVAY 357

Query: 379 TPGIYVGL----KNWLRIAFCAEPSA-LKDGLGRMKAFCQRHTKK 418
            PG    +    KN +R+ F   P   +++G+ R+    +   K+
Sbjct: 358 VPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMKR 402

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  121 bits (304), Expect = 2e-31
 Identities = 59/384 (15%), Positives = 105/384 (27%), Gaps = 41/384 (10%)

Query: 38  KNDPRP-VVPLGYG----DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92
           K DPR   V L  G    +    P  +   EAE  +    +    + Y    G+   R A
Sbjct: 21  KEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNA--QPHGASLYLPMEGLNCYRHA 78

Query: 93  IADYLSRDLPYKLSADDVYVTLGCKQAVEV----ILSVLARPGANVLLPRPGWPYYEGIA 148
           IA  L       L    V        +  +           P + V +  P W  +  I 
Sbjct: 79  IAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIF 138

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEAL---ADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
                EV  +    E    V  + + A        +  ++     NP G   T      +
Sbjct: 139 AGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAV 198

Query: 206 AEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263
            E+ +   ++   D  Y     G     Y    +  + +P +   S SK + + G R G 
Sbjct: 199 IEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGG 258

Query: 264 LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILE-----KTKEDFFCKLIDT 318
           L     +       +          YS  P F    +  +L       +      ++   
Sbjct: 259 LSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTR 318

Query: 319 LRESAEICYDGVKEIPCISC--PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV 376
           +    +     +              +  M +   L+               +L +E  V
Sbjct: 319 ILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA----------AQVDRLREEFGV 368

Query: 377 IVTPGIYVGLKNWLRIAFCAEPSA 400
            +            R+      +A
Sbjct: 369 YLIASG--------RMCVAGLNTA 384

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  120 bits (300), Expect = 9e-31
 Identities = 52/408 (12%), Positives = 107/408 (26%), Gaps = 56/408 (13%)

Query: 38  KNDPRP-VVPLGYG----DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92
           + DP P  V LG G    D           + E  I  A  S   + Y    G+   R  
Sbjct: 25  REDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRI--ANNSSLNHEYLPILGLAEFRTC 82

Query: 93  IADYLSRDLPYKLSAD---------DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY 143
            +     D    L                     + +    +        V +  P W  
Sbjct: 83  ASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWEN 142

Query: 144 YEGIAQRKQVEVRHFDLLPERNWEV----DLDAVEALADKNTAAMVIINPGNPCGNVFTY 199
           + G+      +        +            +    A + +  ++     NP G   T 
Sbjct: 143 HNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTP 202

Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---GSIVPVITLGSISKRWLV 256
              ++IA + ++  +    D  Y     G++      +         +    S SK + +
Sbjct: 203 EQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGL 262

Query: 257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQI-----LEKTKEDF 311
              R G L             +    K     +S+ P      + +      L       
Sbjct: 263 YNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGN 322

Query: 312 FCKLIDTLRESAEICYDGVKEIPCISCPN--KPEGSMVTMVKLNPWLLEDINDDIEFALK 369
              + D +          ++ +      N    +  M +   LNP          +    
Sbjct: 323 VKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNP----------KQVEY 372

Query: 370 LAKEESVIVTPGIYVGLKNWLRIAFCAEPS--------ALKDGLGRMK 409
           L  ++ + + P          RI  C   +        ++ + + +++
Sbjct: 373 LINQKHIYLLPSG--------RINMCGLTTKNLDYVATSIHEAVTKIQ 412

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score =  118 bits (295), Expect = 5e-30
 Identities = 60/357 (16%), Positives = 123/357 (34%), Gaps = 29/357 (8%)

Query: 80  YATNSGIPPARRAIADYLSR--DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137
           +    G+P  R+AIA ++ +      +   + V +  G   A E I+  LA PG   L+P
Sbjct: 79  FQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVP 138

Query: 138 RPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM---VIINPG 190
            P +P +          + + +        +     +      A K+   +   ++ NP 
Sbjct: 139 SPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPS 198

Query: 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP------- 243
           NP G       L+ +     +  + +V DE+Y    F +  +  +               
Sbjct: 199 NPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKD 258

Query: 244 -VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQ 302
            V  + S+SK   +PG+R G + + + +       +++  +   S               
Sbjct: 259 LVHIVYSLSKDMGLPGFRVGIIYSFNDD-------VVNCARKMSSFGLVSTQTQYFLAAM 311

Query: 303 ILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED-IN 361
           + ++   D F +            +    E+  I C  K    +   + L P L E   +
Sbjct: 312 LSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCL-KNNAGLFCWMDLRPLLRESTFD 370

Query: 362 DDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCA-EPSALKDGLGRMKAFCQRH 415
            ++     +  +  + V+PG         W R+ F   +   +   L R++ F    
Sbjct: 371 SEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score =  113 bits (283), Expect = 2e-28
 Identities = 78/397 (19%), Positives = 148/397 (37%), Gaps = 33/397 (8%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDL 101
            + LG G P     +     A +A+  A  S     N Y    G P   +A++   S+ +
Sbjct: 28  PLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLV 83

Query: 102 PYKLS-ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL 160
              ++   +V VT+G  +A+   +      G  V++  P +  YE + +      R   L
Sbjct: 84  DRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPL 143

Query: 161 LPERN--------WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212
            P +         W +D + +EAL ++ T  ++I  P NP G V     L+ +A + +K 
Sbjct: 144 KPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW 203

Query: 213 RVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271
            V+ V+DEVY H+ F    +  +    G     IT+GS  K + + GW+ GW    +   
Sbjct: 204 NVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALL 263

Query: 272 IFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331
              +    + +  C +   +          +   K+ E +F  +   L    +     + 
Sbjct: 264 KNLQMVHQNCVYTCATPIQEAIAVGFETELKR-LKSPECYFNSISGELMAKRDYMASFLA 322

Query: 332 EIPCISCPNKPEGSMVTMV-------KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV 384
           E+     P  P+G    +        K++     D   D  F   + K   +   P    
Sbjct: 323 EVGM--NPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAF 380

Query: 385 GL-------KNWLRIAFCAEPSALKDGLGRMKAFCQR 414
                    ++++R  F  +   L+     ++ +   
Sbjct: 381 YSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 417

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  113 bits (283), Expect = 2e-28
 Identities = 57/392 (14%), Positives = 110/392 (28%), Gaps = 49/392 (12%)

Query: 38  KNDPRP-VVPLGYG----DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92
             D R   V LG G    D        +   AE  I +   S   + Y   +G+P     
Sbjct: 24  GQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHND--SSYNHEYLGITGLPSLTSN 81

Query: 93  IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA----RPGANVLLPRPGWPYYEGIA 148
            A  +       L  D V           + +S        P   V L +P W  +  I 
Sbjct: 82  AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIF 141

Query: 149 QRKQVEVRHFDLLPERNWEVDLDAVEALA---DKNTAAMVIINPGNPCGNVFTYHHLQEI 205
           + + ++   +         +DL+          + +  ++     NP G   T     +I
Sbjct: 142 ENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQI 201

Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTP------MGLFGSIVPVITLGSISKRWLVPGW 259
            +       + + D  Y     G +          +    ++ PV    S +K   + G 
Sbjct: 202 VDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGE 261

Query: 260 RFGWLVTNDP----NGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILE-----KTKED 310
           R G           N   + +      K   S  S+ P +    + ++LE     +    
Sbjct: 262 RVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHK 321

Query: 311 FFCKLIDTLRESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFAL 368
               +   + +      D + ++  P        +  M +   L P          +   
Sbjct: 322 DMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTP----------QMVK 371

Query: 369 KLAKEESVIVTPGIYVGLKNWLRIAFCAEPSA 400
           +L +  +V +            R +       
Sbjct: 372 RLEETHAVYLVASG--------RASIAGLNQG 395

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  109 bits (272), Expect = 5e-27
 Identities = 63/377 (16%), Positives = 113/377 (29%), Gaps = 39/377 (10%)

Query: 38  KNDPRP-VVPLGYG----DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92
           + DPR   + LG G         P  R    AE  +++   +     YA  SG P  ++A
Sbjct: 21  RADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLE---TETTKTYAGLSGEPEFQKA 77

Query: 93  IADYLSRD-LPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRK 151
           + + +  D L  + +A    V         + L+ +A P   V +  P WP +  I    
Sbjct: 78  MGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFM 137

Query: 152 QVEVRHFDLLPERNWEV---DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208
            + V+ +         V    + A  A A K    ++     NP G   T     EIA +
Sbjct: 138 GLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASI 197

Query: 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI--VPVITLGSISKRWLVPGWRFGWLVT 266
             K   + + D  Y     G           +     V+   S SK + +   R G L+ 
Sbjct: 198 LEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLA 257

Query: 267 NDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQI-----LEKTKEDFFCKLIDTLRE 321
              +   ++             YS  P      +  +     L          +   +  
Sbjct: 258 LCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLR 317

Query: 322 SAEICYDGVKEIPCISC--PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379
             E     ++++              M + +   P          E   ++ +E  + + 
Sbjct: 318 LREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATP----------EQVKRIKEEFGIYMV 367

Query: 380 PGIYVGLKNWLRIAFCA 396
                      RI    
Sbjct: 368 GDS--------RINIAG 376

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  108 bits (270), Expect = 1e-26
 Identities = 54/383 (14%), Positives = 104/383 (27%), Gaps = 42/383 (10%)

Query: 38  KNDPRP-VVPLGYG----DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92
           + D RP  + LG G    +    P   +  +AE  +++   +     Y    GIP   R 
Sbjct: 21  RADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLE---NETTKNYLGIDGIPEFGRC 77

Query: 93  IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN----VLLPRPGWPYYEG-- 146
             + L       ++               + ++            V +  P WP ++   
Sbjct: 78  TQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVF 137

Query: 147 -IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205
             A  +  E  ++D          L      A      +      NP G   T    Q +
Sbjct: 138 NSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTL 197

Query: 206 AEMARKLRVMVVADEVYGHLTFGSIPYTP--MGLFGSIVPVITLGSISKRWLVPGWRFGW 263
           A+++ +   + + D  Y     G                 +I   S SK + +   R G 
Sbjct: 198 AQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257

Query: 264 LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDT 318
                 +                + YS+ P      +  IL         E     +   
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQR 317

Query: 319 LRESAEICYDGVKEIPCISCPN--KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV 376
           ++   ++  + ++E       +    +  M +   L            E  L+L +E  V
Sbjct: 318 IQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTK----------EQVLRLREEFGV 367

Query: 377 IVTPGIYVGLKNWLRIAFCAEPS 399
                         R+       
Sbjct: 368 YAVASG--------RVNVAGMTP 382

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  107 bits (268), Expect = 2e-26
 Identities = 60/386 (15%), Positives = 107/386 (27%), Gaps = 44/386 (11%)

Query: 38  KNDPRP-VVPLGYG----DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92
           K D     + LG G    D           +AE  I           Y   +G+    RA
Sbjct: 23  KRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK---KMDKEYLPIAGLADFTRA 79

Query: 93  IADYLSRDLPYKLSADDVYVTLG-----CKQAVEVILSVLARPGANVLLPRPGWPYYEGI 147
            A+    +      +       G       +     L    +   +V LP+P W  +  I
Sbjct: 80  SAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPI 139

Query: 148 AQRKQVEVRHFDLLPERNWEVDLDAVEALA---DKNTAAMVIINPGNPCGNVFTYHHLQE 204
            +   ++++ +     +   +D            + +  ++     NP G        +E
Sbjct: 140 FRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKE 199

Query: 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMG---LFGSIVPVITLGSISKRWLVPGWRF 261
           +A + +K  ++   D  Y     G I              + V+   S +K   + G R 
Sbjct: 200 LASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERA 259

Query: 262 GWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILE-----KTKEDFFCKLI 316
           G       +    K            +YS+ P         IL      K        + 
Sbjct: 260 GAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMA 319

Query: 317 DTLRESAEICYDGVKEIPCISCPN--KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374
           D +          +K+            +  M     L P          E   +L KE 
Sbjct: 320 DRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKP----------EQVERLTKEF 369

Query: 375 SVIVTPGIYVGLKNWLRIAFCAEPSA 400
           S+ +T           RI+     S+
Sbjct: 370 SIYMTKDG--------RISVAGVASS 387

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score =  105 bits (261), Expect = 1e-25
 Identities = 57/382 (14%), Positives = 121/382 (31%), Gaps = 19/382 (4%)

Query: 37  NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY 96
           N      VVPL   D      F+   E  + +   +       Y         ++ +  +
Sbjct: 26  NPEVGNEVVPLSVADME----FKNPPELIEGLKKYLDETVLG-YT--GPTEEYKKTVKKW 78

Query: 97  LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL-LPRPGWPYYEGIAQRKQVEV 155
           +     + +  D +  T G   AV   +    +PG  V+ +    +P++  I  +++  +
Sbjct: 79  MKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKII 138

Query: 156 RHFDLLPERNWEV-DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214
               L  +  + +      +   DKN  A++  +P NP G V+    LQ+I ++  K  +
Sbjct: 139 ECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDL 198

Query: 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274
           M+ +DE++  L      +T        +   T+   +          G       N   +
Sbjct: 199 MLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIR 258

Query: 275 KSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334
           +             ++ +         +   K  +     +    R    +        P
Sbjct: 259 ERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRI---VKDFFEVNHP 315

Query: 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRI 392
            I  P   EG+ +  +           D       +  +  +    G   G     + RI
Sbjct: 316 EIKAP-LIEGTYLQWIDFRAL----KMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERI 370

Query: 393 AFCAEPSALKDGLGRMKAFCQR 414
              A  S +++ L R+    + 
Sbjct: 371 NLAAPSSVIQESLERLNKALKD 392

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score =  102 bits (254), Expect = 9e-25
 Identities = 64/373 (17%), Positives = 118/373 (31%), Gaps = 23/373 (6%)

Query: 42  RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101
              + L  G    FP F      ++ +   V  G  N YA  +G+   R AIA    R  
Sbjct: 26  HQAINLSQG----FPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLY 80

Query: 102 PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161
            Y+  AD                        + ++           A      +     L
Sbjct: 81  GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMAL 140

Query: 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEV 221
              ++ VD     AL  + T  +++  P NP   V+       + +      + V++DEV
Sbjct: 141 QPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEV 200

Query: 222 YGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280
           Y H+ F    +  +     +    + + S  K + + GW+ G+ V   P     +     
Sbjct: 201 YEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQY 260

Query: 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN 340
                 +        +  A P+      + +  K    +     +    ++ +P      
Sbjct: 261 LTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVN---ALNESRLEILP------ 311

Query: 341 KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCA 396
             EG+   +V  +        DD+EF   L +E  V   P             +R+ F  
Sbjct: 312 -CEGTYFLLVDYSAV---STLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK 367

Query: 397 EPSALKDGLGRMK 409
           + S L     R++
Sbjct: 368 KESTLLAAAERLR 380

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 99.5 bits (246), Expect = 1e-23
 Identities = 80/389 (20%), Positives = 145/389 (37%), Gaps = 38/389 (9%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
           K     +  L  G P      +T     + I +     +   Y+ ++GI   R A A Y 
Sbjct: 24  KKRGVRIHHLNIGQPD----LKTPEVFFERIYENKP--EVVYYSHSAGIWELREAFASYY 77

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
            R     +  ++V VT G  +A+    +V+A PG  +L+  P +  Y   A+   V++  
Sbjct: 78  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIP 137

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
                E  + +    +E+  ++ T  +V+ NP NP G V+    ++ + E+A +  + ++
Sbjct: 138 VTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLI 196

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
            DEVY  + F     + + +    V VI   S+SK++   G R G L+T +   I     
Sbjct: 197 VDEVYSEIVFRGEFASALSIESDKVVVID--SVSKKFSACGARVGCLITRNEELISHAMK 254

Query: 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337
           +         +       +        +  +E +  +                 E   + 
Sbjct: 255 LAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRER---------VETVLKKLEEHGLK 305

Query: 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE-----ESVIVTPGIYVGL-----K 387
              KP G+     +L       + D  EFA  +  +     E+ +V P     L     K
Sbjct: 306 RFTKPSGAFYITAEL------PVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGK 359

Query: 388 NWLRIAFCAEPSALKDGLGRM----KAFC 412
             +RIA   E   L   +  +    K FC
Sbjct: 360 KEIRIACVLEKDLLSRAIDVLMEGLKMFC 388

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 97.6 bits (241), Expect = 5e-23
 Identities = 64/373 (17%), Positives = 127/373 (34%), Gaps = 20/373 (5%)

Query: 46  PLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKL 105
           P    D      F TA    +A+   +  G F  Y+          AIA + S      +
Sbjct: 3   PFTISDMD----FATAPCIIEALNQRLMHGVFG-YSRWKN-DEFLAAIAHWFSTQHYTAI 56

Query: 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH--FDLLPE 163
            +  V         V  ++   +  G  V++  P +  +    +  Q  V     +   +
Sbjct: 57  DSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQAD 116

Query: 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223
             +         LA      M++ +P NP G V+T   L+ +A++  +  V V++DE++ 
Sbjct: 117 GWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHM 176

Query: 224 HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK 283
            + +G  P+ P          +   S SK + +P     + +  + +        +    
Sbjct: 177 DMVWGEQPHIPWSNVARGDWALL-TSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRD 235

Query: 284 DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE 343
              S      T    A  Q        +   L   L+++     D +           P+
Sbjct: 236 GLSSPSVLALTAHIAAYQQG-----APWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQ 290

Query: 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSAL 401
            + +  + L P  +    DD      L ++E V + PG   G   + ++R+      S L
Sbjct: 291 STYLAWLDLRPLNI----DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKL 346

Query: 402 KDGLGRMKAFCQR 414
           + G+  +    + 
Sbjct: 347 EKGVAGLINAIRA 359

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 97.5 bits (241), Expect = 5e-23
 Identities = 88/373 (23%), Positives = 140/373 (37%), Gaps = 37/373 (9%)

Query: 44  VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103
            V LG G P+            +A+  A+  G+ + YA  +G+P  R A+A+       +
Sbjct: 27  AVNLGQGFPS----NPPPPFLLEAVRRAL--GRQDQYAPPAGLPALREALAEE------F 74

Query: 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163
            +  + V VT G  +A+ V+L  L  PG  V++  P +  Y   A     + R   L   
Sbjct: 75  AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLT 134

Query: 164 RNWEV-DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222
                 DL A+E      T A+++  P NP G VF    L+ IA +AR   + +++DEVY
Sbjct: 135 PEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVY 194

Query: 223 GHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI 282
             L +G  P             +       R    G+R GW+V                 
Sbjct: 195 DELYYGERPRRLREFAPERTFTVGSAGK--RLEATGYRVGWIVGPKEFMPRLA------G 246

Query: 283 KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342
               + +S       G    +    +E F+  L +  R   ++   G++ +        P
Sbjct: 247 MRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGL--RVYVP 304

Query: 343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEP 398
           EG+   M +L  W           A +L +E  V + P     L    K+  R AFC   
Sbjct: 305 EGTYFLMAELPGW----------DAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTE 354

Query: 399 SALKDGLGRMKAF 411
             L   L R+   
Sbjct: 355 EELHLALERLGRV 367

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 81.1 bits (199), Expect = 2e-17
 Identities = 45/339 (13%), Positives = 94/339 (27%), Gaps = 29/339 (8%)

Query: 61  AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120
               ++     +         ++            +L  D       D          A+
Sbjct: 31  GFLIDEKDKALLN----TYIGSSYFAEKVNEYGLKHLGGD-----ENDKCVGFNRTSSAI 81

Query: 121 EVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK 179
              +  L      + L   PG P  E   +   V  ++F+          +  +    DK
Sbjct: 82  LATILALKPKKVIHYLPELPGHPSIERSCK--IVNAKYFESD-------KVGEILNKIDK 132

Query: 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239
           +T  ++  +  +    V    + +++   A+    +V  D+  G          P    G
Sbjct: 133 DTLVIITGSTMDL--KVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG 190

Query: 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299
           + + V +   + +            + +       K G+         IY  +  F    
Sbjct: 191 ADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLER 250

Query: 300 IPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359
           I +  E+ K         +  E        + +   I     P G +  + ++      +
Sbjct: 251 IRKAFERAK-----NFDLSKIEKLNKELKAIDDNINIVYERTPTGFV--IKRVYKDDTIN 303

Query: 360 INDDIEFALKLAKEESVIVTPGIYV-GLKNWLRIAFCAE 397
           I   IE    L K   +I      + G    LRI   + 
Sbjct: 304 IKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSR 342

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 79.0 bits (193), Expect = 1e-16
 Identities = 69/405 (17%), Positives = 129/405 (31%), Gaps = 27/405 (6%)

Query: 30  ASIIDSVNKNDPRP-VVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86
           +SII  + K       +  G G  DP  FP  +   E    I++         Y+T  G 
Sbjct: 25  SSIIREILKFAADKDAISFGGGVPDPETFP-RKELAEIAKEIIEKEYHYTLQ-YSTTEGD 82

Query: 87  PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG 146
           P  ++ I   L R        +D  +     Q    ++  L     +  +          
Sbjct: 83  PVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI 142

Query: 147 IAQRKQVEVRHFDLLPERNWEVDL-------DAVEALADKNTAAMVIINPGNPCGNVFTY 199
            A R+ +       L +   ++++               +     V+ N  NP G   + 
Sbjct: 143 NAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSL 202

Query: 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259
              + + E+A K  + +V D+ YG L +      P+   G    V+ L +   + L PG 
Sbjct: 203 EKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLL-NTFSKVLAPGL 261

Query: 260 RFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319
           R   +V      I +      S   C    +            +  +  +          
Sbjct: 262 R-IGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDL-LEQLKPTIELYRRKR 319

Query: 320 RESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379
                   +   +IP +    K EG +   + L          D     + AK + V   
Sbjct: 320 TVMLNALEEYFSDIPGVKW-VKSEGGLFIWLTLPEGF------DTWEMFEYAKRKKVFYV 372

Query: 380 PGIYVGL----KNWLRIAFCAEPSA-LKDGLGRMKAFCQRHTKKH 419
           PG    +       +R++FC  P   + +G+ R++     + K+ 
Sbjct: 373 PGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKEK 417

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Length = 354

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

 Score = 53.6 bits (127), Expect = 2e-08
 Identities = 40/308 (12%), Positives = 86/308 (27%), Gaps = 30/308 (9%)

Query: 90  RRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ 149
               A Y        +  + V V+ G  + +E+++   A             P Y   + 
Sbjct: 62  IENYAQY------AGVKPEQVLVSRGADEGIELLIR--AFCEPGKDAILYCPPTYGMYSV 113

Query: 150 RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209
             +        +P  +         +        + + +P NP G +      + + E+ 
Sbjct: 114 SAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELT 173

Query: 210 RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269
           R   ++V  +         S+           +    L ++SK + + G R G+ + N+ 
Sbjct: 174 RGKAIVVADEAYIEFCPQASLAGWLAEYPHLAI----LRTLSKAFALAGLRCGFTLANEE 229

Query: 270 NGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329
                           +     + T +     Q L         + +  +    E     
Sbjct: 230 VINLL---------MKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAA 280

Query: 330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNW 389
           +KEIPC+        +         ++L            L  +  ++        L   
Sbjct: 281 LKEIPCVEQV-FDSETN--------YILARFKASSAVFKSLWDQGIILRDQNKQPSLSGC 331

Query: 390 LRIAFCAE 397
           LRI     
Sbjct: 332 LRITVGTR 339

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.8 bits (86), Expect = 0.002
 Identities = 48/374 (12%), Positives = 105/374 (28%), Gaps = 54/374 (14%)

Query: 38  KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97
           + + R    L   +      F    +  D +   + S     Y  +S        I  YL
Sbjct: 15  ETEKRDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKILSYL 69

Query: 98  SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRH 157
                  LS ++V V  G  + + V++ +  R             + + +  +       
Sbjct: 70  D---TDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLT 126

Query: 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217
            DL                       + I NP NP G+VF    ++ I +    +     
Sbjct: 127 KDLRIPEVN-----------VGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVA---- 171

Query: 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277
                    +     + +        +  + + SK + +   R G++V ++         
Sbjct: 172 ----LDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKF------- 220

Query: 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337
               I     +           +   +     + F +    + E  E     ++E+    
Sbjct: 221 ----IDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGY-- 274

Query: 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE 397
                 G        N   +    ++ E  L+  + ++V V        +  +RI    +
Sbjct: 275 RITDSRG--------NFVFVFMEKEEKERLLEHLRTKNVAVR-----SFREGVRITI-GK 320

Query: 398 PSALKDGLGRMKAF 411
                  L  ++ F
Sbjct: 321 REENDMILRELEVF 334

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	419
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	100.0
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.97
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.96
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.96
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.95
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.95
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.95
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.95
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.94
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.93
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.93
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.91
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.91
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.9
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.89
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.88
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.87
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.86
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.86
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.86
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.85
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.85
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.85
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.85
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.85
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.84
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.84
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.84
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.84
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.83
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.83
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.83
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.83
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.82
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.82
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.82
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.82
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.82
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.82
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.81
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.8
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.8
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.8
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.8
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.79
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.78
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.77
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.76
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.76
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.76
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.73
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.72
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.71
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.71
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.7
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.68
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.61
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.56
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.37
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.22
d1ofux_	119	Hypothetical protein PA3008 {Pseudomonas aeruginos	92.09

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=3.3e-60  Score=447.41  Aligned_cols=382  Identities=21%  Similarity=0.372  Sum_probs=332.7

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA   92 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   92 (419)
                      .+++....+++.+..+.+. .+.+ +..|.++|||+.|+|    .+++|+.+++++.++++.+. ++|+++.|.+++|++
T Consensus         3 ~~~~~~~~~~s~~~~i~~~-a~~~-~~~g~~vi~l~~G~p----~~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lR~a   75 (388)
T d1j32a_           3 LAARVESVSPSMTLIIDAK-AKAM-KAEGIDVCSFSAGEP----DFNTPKHIVEAAKAALEQGK-TRYGPAAGEPRLREA   75 (388)
T ss_dssp             CCHHHHTSCCCSSTTTHHH-HHHH-HTTTCCCEECCCSSC----SSCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred             hhhHhhcCCcCHHHHHHHH-HHHH-HHCCCCeEECCCCCC----CCCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence            3455666666665555543 3334 345889999999986    46788999999999988754 589999999999999


Q ss_pred             HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      |++++.+.+|..+++++|++|+|+++++..+++++++|||+|++++|+|+.|...++..|..++.++...+++|.+|+++
T Consensus        76 ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~  155 (388)
T d1j32a_          76 IAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQ  155 (388)
T ss_dssp             HHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHH
T ss_pred             HHHHHHHhcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998888889999999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSI  250 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~  250 (419)
                      ++++++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++.....  .+++++++||
T Consensus       156 l~~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~  235 (388)
T d1j32a_         156 IRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGF  235 (388)
T ss_dssp             HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEES
T ss_pred             HHHhCCCCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCC
Confidence            99999988999999999999999999999999999999999999999999999998777666654432  2478999999


Q ss_pred             CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769          251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      ||.|++||+|+||+++++        ++++.+.... .....++...|.++...+... .+++++.+..++++++.+.+.
T Consensus       236 SK~~~~~GlRvG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  306 (388)
T d1j32a_         236 AKTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDA  306 (388)
T ss_dssp             TTTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhcchhHeEEEEECH--------HHHHHHHHhhhhccccccHHHHHHHhhcccch-HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999865        5777766554 335677888888888888754 578999999999999999999


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      |++++++. +..|++|+|+|++++...    .++.+++.++++++||.+.||+.|+.++|+|++++.++++|++++++|+
T Consensus       307 l~~~~g~~-~~~p~gg~~l~~~l~~~~----~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~e~l~~al~rl~  381 (388)
T d1j32a_         307 LNAMPGLE-CPKPDGAFYMFPSIAKTG----RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLE  381 (388)
T ss_dssp             HHTCTTCB-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHH
T ss_pred             HHhCCCCE-ecCCCceEEEEEECCCCC----CCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEeCCHHHHHHHHHHHH
Confidence            99988888 558999999999987532    3678899999999999999999999999999999989999999999999


Q ss_pred             HHHHHH
Q 014769          410 AFCQRH  415 (419)
Q Consensus       410 ~~~~~~  415 (419)
                      ++++.+
T Consensus       382 ~~l~~l  387 (388)
T d1j32a_         382 KFLHGI  387 (388)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999875

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.5e-58  Score=440.24  Aligned_cols=402  Identities=28%  Similarity=0.535  Sum_probs=335.2

Q ss_pred             ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHH
Q 014769            9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP   88 (419)
Q Consensus         9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~   88 (419)
                      |.-+++.. ++-.-..|+.+.+.+..   ...+.++|+|++|+|...+..++++.+++++.+.+.....++|++..|.++
T Consensus         1 ~~~~~~~~-~~~~~~pir~~~~~~~~---~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~   76 (412)
T d1bw0a_           1 WDVSMSNH-AGLVFNPIRTVSDNAKP---SPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPE   76 (412)
T ss_dssp             CCCCCCHH-HHTCCCHHHHHHHTCCC---CCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHH
T ss_pred             CCCChhhc-ccCCccHHHHHHHhcCC---CCCCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHH
Confidence            55555543 44445677777653211   223568999999999876666778899999999888777779999999999


Q ss_pred             HHHHHHHHHHhhC------CCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC
Q 014769           89 ARRAIADYLSRDL------PYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP  162 (419)
Q Consensus        89 lr~~ia~~l~~~~------~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~  162 (419)
                      ||++||+|+++++      +..+++++|++|+|+++++..++++++++||+|++++|+|+.|...++..|.+++.+++++
T Consensus        77 LReaia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~  156 (412)
T d1bw0a_          77 AREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRP  156 (412)
T ss_dssp             HHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEG
T ss_pred             HHHHHHHHHHHhcCcccccCCCCCCCeEEEecccccchhhhhhhhhccccceeeeeccchhhhhhhhccCcccccccccc
Confidence            9999999998865      3457889999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc----cc
Q 014769          163 ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG----LF  238 (419)
Q Consensus       163 ~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~----~~  238 (419)
                      +++|.++++.+++...+.++++++++|+||||.+++.+++++|+++|++++++||+||+|..+.|++....+..    ..
T Consensus       157 ~~~~~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~  236 (412)
T d1bw0a_         157 ENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF  236 (412)
T ss_dssp             GGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS
T ss_pred             ccccchhhHHHHhhhhccccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCcccccccccc
Confidence            88899999999999988899999999999999999999999999999999999999999999999875433322    23


Q ss_pred             CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                      ....++++++|+||.++++|+|+||++++++...  .+.++...........+++...|.++...+.....+++.+++++
T Consensus       237 ~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (412)
T d1bw0a_         237 ETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGN--GPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAK  314 (412)
T ss_dssp             CCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCS--CHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred             ccccccccccccCccCccCCCCcccccccchhhc--chhhhhhhccccccccCCchhhhhhcccccccccccccccccch
Confidence            3445689999999999999999999999764321  12344444444444455666666666666655457889999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCH
Q 014769          319 LRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEP  398 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~  398 (419)
                      ++++++.+.+.|.+.+++. +..|++|+|+|++++.....+..++.+++.+|++++||.+.||+.|+.++|+||+++.++
T Consensus       315 ~~~~r~~~~~~l~~~~g~~-~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~  393 (412)
T d1bw0a_         315 IEESAMYLYNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPV  393 (412)
T ss_dssp             HHHHHHHHHHHHTTSTTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH
T ss_pred             hHHHHHHHHHHHHHhcCce-ecCCCCceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcCCH
Confidence            9999999999998877888 558999999999998655555567899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 014769          399 SALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       399 ~~l~~~l~~l~~~~~~~~~  417 (419)
                      +++++++++|++++++++.
T Consensus       394 e~l~eal~Rl~~~l~~~~~  412 (412)
T d1bw0a_         394 EVYREAVERIKAFCQRHAA  412 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHBC
T ss_pred             HHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999863

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-58  Score=436.17  Aligned_cols=376  Identities=23%  Similarity=0.386  Sum_probs=321.1

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA   92 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   92 (419)
                      ++++..+.+++.++.+.+.. ++++ ..|.++|+|+.|+|    ++++++.+++++.+++.++. .+|+++.|.++||++
T Consensus         4 ~~~r~~~~~~s~~~~i~~~a-~~~~-~~G~~vi~l~~g~p----~~~~p~~i~~a~~~~~~~~~-~~Y~~~~G~~~lR~~   76 (382)
T d1b5pa_           4 LSRRVQAMKPSATVAVNAKA-LELR-RQGVDLVALTAGEP----DFDTPEHVKEAARRALAQGK-TKYAPPAGIPELREA   76 (382)
T ss_dssp             CCHHHHHCCCCHHHHHHHHH-HHHH-HTTCCCEECCCSSC----SSCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred             HHHHHHhCCCCHHHHHHHHH-HHHH-hCCCCeEECCCCCC----CCCCCHHHHHHHHHHHhcCC-cCCCCCCCCHHHHHH
Confidence            45677788888998888643 3343 44899999999996    47889999999999988764 489999999999999


Q ss_pred             HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      |++++.+.++..+++++|++|+|+++++..++++++++||.|++++|+|+.+...++..|..+..+++++++++.+|++.
T Consensus        77 ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~  156 (382)
T d1b5pa_          77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPER  156 (382)
T ss_dssp             HHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred             HHhhhhhhcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998888889999999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      ++++++++++++++++||||||.+++.+++++|+++|+++|++||+||+|+++.|++....+...  ..+++++++|+||
T Consensus       157 l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~s~SK  234 (382)
T d1b5pa_         157 VRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVNGAAK  234 (382)
T ss_dssp             HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEEESTT
T ss_pred             HHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHc--CCCCEEEEecchh
Confidence            99999888999999999999999999999999999999999999999999999998776555433  2358999999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHH
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      .|++||+|+||+++++        ++++.+.... .....++...|.++..++....  ..++...++.++.+++.+.+.
T Consensus       235 ~~~~~GlR~G~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (382)
T d1b5pa_         235 AFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEG  306 (382)
T ss_dssp             TTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCcHhheEEEEECH--------HHHHHHHHHHHhcccCcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHH
Confidence            9999999999999865        5777776554 3345667777777766665422  456777788889999999998


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                      +... ++. +..|++|+|+|++++...    .+...+...+ .++||.+.||+.|+.++++||+++.++++|++++++|+
T Consensus       307 l~~~-g~~-~~~p~gg~~~~~~~~~~~----~~~~~~~~~l-~e~gV~v~PG~~F~~~~~iRis~~~~~e~l~~al~rl~  379 (382)
T d1b5pa_         307 LTAL-GLK-AVRPSGAFYVLMDTSPIA----PDEVRAAERL-LEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFA  379 (382)
T ss_dssp             HHHH-TCC-BCCCSBTTEEEEECTTTC----SSHHHHHHHH-HHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGG
T ss_pred             Hhhc-CCe-EecCCceEEEeEeCCCCC----CCHHHHHHHH-HHCCEEEEeCcccCCCCeEEEEEcCCHHHHHHHHHHHH
Confidence            8876 777 558999999999986421    2455555554 67899999999999999999999989999999999998


Q ss_pred             HHH
Q 014769          410 AFC  412 (419)
Q Consensus       410 ~~~  412 (419)
                      +++
T Consensus       380 ~~L  382 (382)
T d1b5pa_         380 RVL  382 (382)
T ss_dssp             GGC
T ss_pred             HhC
Confidence            763

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=7.7e-58  Score=432.25  Aligned_cols=377  Identities=23%  Similarity=0.376  Sum_probs=325.0

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      .+....+++.|+.+.+...+      .+++|+|+.|+|    ++++++.+++++.++++++. ++|+++.|.++||++|+
T Consensus         4 ~~~~~~~~s~ir~~~~~~~~------~~dvi~l~~g~p----~~~~p~~v~~~~~~a~~~~~-~~Y~~~~G~~~lr~aia   72 (388)
T d1gdea_           4 DRLELVSASEIRKLFDIAAG------MKDVISLGIGEP----DFDTPQHIKEYAKEALDKGL-THYGPNIGLLELREAIA   72 (388)
T ss_dssp             HHHHHSCCCHHHHHHHHHHH------CTTCEECCCCSC----CSCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHH
T ss_pred             hhhhhCCccHHHHHHHHHhC------CCCeEECCCCCC----CCCCCHHHHHHHHHHHhcCc-cCCCCCcCCHHHHHHHH
Confidence            45566778889988863322      578999999996    46788999999999988754 58999999999999999


Q ss_pred             HHHHhhCCC-CCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           95 DYLSRDLPY-KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        95 ~~l~~~~~~-~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      +|+.+..+. ...+++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++++++|.+|+++|
T Consensus        73 ~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  152 (388)
T d1gdea_          73 EKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDEL  152 (388)
T ss_dssp             HHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHH
T ss_pred             HHHHhhccccCCChheeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHH
Confidence            999875554 4566789999999999999999999999999999999999999999999999999998888899999999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCC
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISK  252 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK  252 (419)
                      ++.++++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++....++..+.. .+++|+++||||
T Consensus       153 ~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  232 (388)
T d1gdea_         153 KKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSK  232 (388)
T ss_dssp             HHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTT
T ss_pred             HHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChh
Confidence            9999989999999999999999999999999999999999999999999999888777666665544 357999999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGV  330 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l  330 (419)
                      .|+++|+|+||+++++        ++++.+.... .....++...|.++..++.... .+++...+..+++++..+.+.|
T Consensus       233 ~~~~~GlR~G~ii~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  304 (388)
T d1gdea_         233 TFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRL  304 (388)
T ss_dssp             TTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCccccEEEEEeec--------cchhhhhhccccccccccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhh
Confidence            9999999999999975        5677776654 3456778888888888887633 4567777888889999999999


Q ss_pred             hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769          331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM  408 (419)
Q Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l  408 (419)
                      ... ++. +..|++|+|+|++++...    .++.++++++++++||.+.||+.|+.  ++|+||+++.++++|++++++|
T Consensus       305 ~~~-~~~-~~~p~gg~fl~~~l~~~~----~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~~~e~l~~al~rL  378 (388)
T d1gdea_         305 NEM-GLP-TVKPKGAFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRM  378 (388)
T ss_dssp             HHT-TCC-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHH
T ss_pred             hhc-ccc-ccCCCceEEEEEECCCCC----CCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEecCCHHHHHHHHHHH
Confidence            876 566 448999999999987532    36788999999999999999999975  6899999998999999999999


Q ss_pred             HHHHHHHh
Q 014769          409 KAFCQRHT  416 (419)
Q Consensus       409 ~~~~~~~~  416 (419)
                      ++++++++
T Consensus       379 ~~~l~e~k  386 (388)
T d1gdea_         379 ERVLKERK  386 (388)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhcC
Confidence            99999874

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=8.7e-58  Score=431.85  Aligned_cols=389  Identities=26%  Similarity=0.468  Sum_probs=325.8

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA   92 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   92 (419)
                      .+.+..+.+ ..|+++... +.++.+ .|.++|+|+.|+|... ++++++.+++++.+++..+. ++|+++.|.++||++
T Consensus         4 ~s~r~~~~~-~~ir~i~~~-a~~l~~-~G~~vi~l~~G~P~~~-df~~p~~i~~a~~~a~~~~~-~~Y~~~~G~~~LR~a   78 (395)
T d1xi9a_           4 ASKRALSVE-YAIRDVVLP-ARELEK-KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKA   78 (395)
T ss_dssp             CCHHHHTCC-C-------C-HHHHHH-TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred             chhccccCc-HHHHHHHHH-HHHHHH-CCCCeEECCCCCCCCC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence            345556665 469998753 444543 4899999999998643 57889999999999997653 589999999999999


Q ss_pred             HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769           93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA  172 (419)
Q Consensus        93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  172 (419)
                      |++++++++|..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|..++.++....++|.+|++.
T Consensus        79 ia~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~  158 (395)
T d1xi9a_          79 IVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDD  158 (395)
T ss_dssp             HHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHH
T ss_pred             HHHhhhhcccccccccccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998878889999999


Q ss_pred             HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      ++..+.++++++++++||||||.+++.+++++|+++|+++++++|.||+|.++.|++... +........++|+++||||
T Consensus       159 ~~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~vi~~~S~SK  237 (395)
T d1xi9a_         159 IRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI-SPGSLTKDVPVIVMNGLSK  237 (395)
T ss_dssp             HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC-CHHHHCSSSCEEEEEESTT
T ss_pred             HHHhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEecccccccccccccc-chhhcCCCCCEEEEeCcch
Confidence            999998899999999999999999999999999999999999999999999998876543 3334455668999999999


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      .|+++|+|+||+++..+.....  .+.+...........++.++|.++..++... .+++++.++.++++++.+.+.|++
T Consensus       238 ~~~~~GlRvG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~  314 (395)
T d1xi9a_         238 VYFATGWRLGYMYFVDPENKLS--EVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNE  314 (395)
T ss_dssp             TTCCGGGCCEEEEEECTTCTTH--HHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hcccchhhcEeeEecCHHHHHH--HHHHHHHHhhcCCCCcCHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999998876543331  1223222233445677888999988888753 578999999999999999999999


Q ss_pred             CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                      ++++. +..|++|+|+|++++...   ..++.+++.++++++||.+.||+.|+.  ++|+||+++.+++++++++++|++
T Consensus       315 ~~~~~-~~~p~gg~~~~~~l~~~~---~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~e~l~eal~rl~~  390 (395)
T d1xi9a_         315 IPGIS-TTKPQGAFYIFPKIEVGP---WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEK  390 (395)
T ss_dssp             STTEE-CCCCCBSSEECCEECSCS---CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHH
T ss_pred             CCCce-ecCCCeeEEEeEECCCCC---CCCHHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEecCCHHHHHHHHHHHHH
Confidence            86666 558999999999987532   236788999999999999999999976  689999999899999999999999


Q ss_pred             HHHH
Q 014769          411 FCQR  414 (419)
Q Consensus       411 ~~~~  414 (419)
                      ++++
T Consensus       391 ~l~e  394 (395)
T d1xi9a_         391 FMKE  394 (395)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            9876

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.7e-55  Score=411.10  Aligned_cols=372  Identities=24%  Similarity=0.377  Sum_probs=315.5

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      ++|....+.+....+.+ ..+.+.+ .|.++|||+.|+|.    +++++.+++++.+.+.++. .+|+++.|.++||+++
T Consensus         2 ~~r~~~~~~~~~~~~~~-~a~~~~~-~G~~vI~l~~G~p~----~~~p~~i~~~~~~~~~~~~-~~Y~~~~G~~~lR~ai   74 (375)
T d1o4sa_           2 SRRISEIPISKTMELDA-KAKALIK-KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGI   74 (375)
T ss_dssp             CHHHHHSCCCSSHHHHH-HHHHHHH-TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHH
T ss_pred             chhhhhCCCCHHHHHHH-HHHHHHH-CCCCeEECCCcCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCcCCHHHHHHH
Confidence            34555555555555543 3333433 38899999999964    6778999999999887655 4799999999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++++.+.++...++++|++|+|+++++..++++++++||+|++++|+|+.+...+...+.....++.+..+++.++.+.+
T Consensus        75 a~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (375)
T d1o4sa_          75 AKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEV  154 (375)
T ss_dssp             HHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHH
T ss_pred             HhhhhhccccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999988888899999999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR  253 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  253 (419)
                      +....++++++++++|+||||.+++.+++++|+++|++|+++||+||+|.++.+++.....+...+..+++++++|+||.
T Consensus       155 ~~~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~  234 (375)
T d1o4sa_         155 EGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKS  234 (375)
T ss_dssp             HHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTT
T ss_pred             HHhhccCccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhh
Confidence            99888889999999999999999999999999999999999999999999988876665555455666789999999999


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE  332 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  332 (419)
                      |++||+|+||+++++        +.++.+..... .....+...+......++.    +.....+.++++++.+.+.|++
T Consensus       235 ~~l~G~R~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~r~~~~~~~l~~  302 (375)
T d1o4sa_         235 HSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKALEV----DNSYMVQTFKERKNFVVERLKK  302 (375)
T ss_dssp             TTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCccccccccccc--------cchhhhhhhhccccccccccchhhhhhhccc----chhhhHHHHHHHHHHHHHHHHh
Confidence            999999999999875        56666655542 3445566666666655554    2344566788889999999988


Q ss_pred             CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      . ++. +..|++|+|+|++++.       ++.+++.++++++||.+.||+.|+.++|+||+++.++++|++++++|++++
T Consensus       303 ~-g~~-~~~p~gg~f~~~~~~~-------~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~e~l~~al~rl~~~l  373 (375)
T d1o4sa_         303 M-GVK-FVEPEGAFYLFFKVRG-------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFL  373 (375)
T ss_dssp             T-TCC-CCCCSBSSEEEEECSS-------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             c-Cce-EecCCccEEEEEECCC-------CHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            7 888 5589999999999974       578899999999999999999999999999999989999999999999987


Q ss_pred             H
Q 014769          413 Q  413 (419)
Q Consensus       413 ~  413 (419)
                      +
T Consensus       374 ~  374 (375)
T d1o4sa_         374 N  374 (375)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=5.2e-54  Score=409.28  Aligned_cols=381  Identities=21%  Similarity=0.338  Sum_probs=319.5

Q ss_pred             cCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHH
Q 014769           12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPA   89 (419)
Q Consensus        12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~l   89 (419)
                      ....+.+..+++...++. ++.+      +.++|||+.|+|.    +++++.+++++.+++.+..  .++|+++.|.++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~-~~~~------~~~~I~L~~G~Pd----~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~l   71 (418)
T d2r5ea1           3 DLPKRYQGSTKSVWVEYI-QLAA------QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRL   71 (418)
T ss_dssp             CCCGGGTTCCCCHHHHHH-HHHH------HHCCEECSSSCCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHH
T ss_pred             chhhhhcCCCCCHHHHHH-HHhc------CCCCEEccCCCCC----CCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHH
Confidence            344455555666666665 3443      3478999999964    6678999999999987643  4589999999999


Q ss_pred             HHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC----
Q 014769           90 RRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER----  164 (419)
Q Consensus        90 r~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~----  164 (419)
                      |++||+++.+++|..+++ ++|++|+|+++++..++++++++||.|++++|+|+.+...+...|..++.++++++.    
T Consensus        72 ReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  151 (418)
T d2r5ea1          72 VQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT  151 (418)
T ss_dssp             HHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSC
T ss_pred             HHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEEEecccccccc
Confidence            999999999999988885 899999999999999999999999999999999999999999999999999986543    


Q ss_pred             ----CcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-
Q 014769          165 ----NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-  239 (419)
Q Consensus       165 ----~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-  239 (419)
                          .+..+.+.+......+++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.+++....++..+. 
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~  231 (418)
T d2r5ea1         152 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG  231 (418)
T ss_dssp             EEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT
T ss_pred             hhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCcccccccccc
Confidence                356788888888888889999999999999999999999999999999999999999999999876655554443 


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcc------cchHHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEK------TKEDFF  312 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~------~~~~~~  312 (419)
                      ...+++++.|+||.+++||+|+||+++++        ++++.+.... ....+++.+.|.++...+..      ...+++
T Consensus       232 ~~~~~i~~~S~SK~~~~pGlRiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~  303 (418)
T d2r5ea1         232 MWERTITIGSAGKTFSLTGWKIGWAYGPE--------ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYF  303 (418)
T ss_dssp             TGGGEEEEEEHHHHTTCGGGCCEEEESCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHH
T ss_pred             ccceeeeeecCCccccCCCcccccccccc--------hhhhhhhhcccccccccccchhhhccccccccccccccchhhH
Confidence            34589999999999999999999999875        6777777664 34567788888877766643      124688


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc-------ccCCCCHHHHHHHHHHhcCeEeecCCCCC
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL-------LEDINDDIEFALKLAKEESVIVTPGIYVG  385 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~~g~~~~  385 (419)
                      .+.++.++.+++.+.+.|+++ ++. +..|++|+|+|++++...       .....++.+++.+|++++||.+.||+.|+
T Consensus       304 ~~~~~~~~~~r~~l~~~L~~~-g~~-~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~  381 (418)
T d2r5ea1         304 NSISGELMAKRDYMASFLAEV-GMN-PTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFY  381 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TCE-EEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGS
T ss_pred             HHHHHHHHHhhhhHHhhHhhc-CCc-ccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhC
Confidence            899999999999999999998 887 568999999999886421       11223578899999999999999999997


Q ss_pred             C-------CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769          386 L-------KNWLRIAFCAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       386 ~-------~~~~Ris~~~~~~~l~~~l~~l~~~~~  413 (419)
                      .       .+|+|||++.++++|++++++|++++.
T Consensus       382 ~~~~~~~g~~~iRis~~~~~e~l~~a~~rl~~~lg  416 (418)
T d2r5ea1         382 SEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKG  416 (418)
T ss_dssp             CGGGHHHHTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             CCCCccCCCCEEEEEecCCHHHHHHHHHHHHHHHc
Confidence            5       479999998899999999999999874

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-54  Score=407.58  Aligned_cols=378  Identities=21%  Similarity=0.368  Sum_probs=318.3

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-CCCCCCCCCCHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-FNCYATNSGIPPARRA   92 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~   92 (419)
                      ++|+..-+.....++.. +.+      ++++|||++|+|.    +++++.+++++.+++.++. .++|+++.|+++||++
T Consensus         4 ~~r~~~~~~~~~~~~~~-~~~------~~dvI~l~~G~p~----~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LRea   72 (418)
T d1w7la_           4 ARRLDGIDYNPWVEFVK-LAS------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKI   72 (418)
T ss_dssp             CGGGTTCCCCTHHHHHH-HHH------TSCCEECCCCSCS----SCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHH
T ss_pred             CccccCCCCCHHHHHHH-HhC------CCCCEECCCCCCC----CCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHH
Confidence            34555666666666654 332      7789999999964    6778999999999988653 4579999999999999


Q ss_pred             HHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC---------
Q 014769           93 IADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP---------  162 (419)
Q Consensus        93 ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~---------  162 (419)
                      |++++++.+|..+++ ++|++|+|+++++..++++++.+||.|++++|+|+.|...+...|.+++.++..+         
T Consensus        73 ia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~  152 (418)
T d1w7la_          73 LASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELG  152 (418)
T ss_dssp             HHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSE
T ss_pred             HHHHHHHHhCCCCCcccceeeccCcHHHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccc
Confidence            999999988988885 6899999999999999999999999999999999999999999999988887654         


Q ss_pred             -CCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-
Q 014769          163 -ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-  240 (419)
Q Consensus       163 -~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-  240 (419)
                       +.++.+|.+++.....+.++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....++..+.. 
T Consensus       153 ~~~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~  232 (418)
T d1w7la_         153 SSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGM  232 (418)
T ss_dssp             EGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT
T ss_pred             cccCcccchhhhhccccccccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHcccc
Confidence             235667888888888878899999999999999999999999999999999999999999999998877777666644 


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc------hHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK------EDFFC  313 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~------~~~~~  313 (419)
                      .++++++.|+||.+++||+|+||+++++        +++..++.... ...+++.+.|.++..++....      .+++.
T Consensus       233 ~~~~i~~~S~SK~~~~pG~RvG~~v~~~--------~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~  304 (418)
T d1w7la_         233 WERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFV  304 (418)
T ss_dssp             GGGEEEEEEHHHHTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHH
T ss_pred             ccccceecccCccccCCCCcccccccch--------hhhhhhccccccccccccchhhHHHHHHhhhccccccccccccc
Confidence            3579999999999999999999999975        67777777653 356778888888887776421      36788


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc--------cCCCCHHHHHHHHHHhcCeEeecCCCCC
Q 014769          314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL--------EDINDDIEFALKLAKEESVIVTPGIYVG  385 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gv~v~~g~~~~  385 (419)
                      ..+..++++++.+.+.|+++ |+. +..|++|+|+|++++....        .+..++.+++.+||+++||.|.||+.|+
T Consensus       305 ~~~~~~~~~r~~l~~~L~~~-g~~-~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~  382 (418)
T d1w7la_         305 QFPQAMQRCRDHMIRSLQSV-GLK-PLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFY  382 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TCE-EEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGS
T ss_pred             cchhhhhhhhhhhhhhhhhc-CCc-ccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhc
Confidence            88999999999999999987 887 5589999999999864211        1112467899999999999999999996


Q ss_pred             C-------CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          386 L-------KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       386 ~-------~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                      .       ++|||||++.+++++++++++|+++.
T Consensus       383 ~~~~~~~~~~~iRis~~~~~~~l~~a~~rl~~~~  416 (418)
T d1w7la_         383 SVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWK  416 (418)
T ss_dssp             CHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEEEcCCHHHHHHHHHHHHHHh
Confidence            4       57999999889999999999998764

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=4.2e-53  Score=399.88  Aligned_cols=359  Identities=18%  Similarity=0.248  Sum_probs=297.6

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      ..|.++|+|++|+|    ++|+|+.+++++.++++.+. ++|++  |.++||++|++|+++++|..+++++|++|+|+++
T Consensus        28 ~~g~~vi~l~~g~p----df~~p~~v~~al~~~~~~~~-~~Y~~--g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~  100 (394)
T d1c7na_          28 EVGNEVVPLSVADM----EFKNPPELIEGLKKYLDETV-LGYTG--PTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVP  100 (394)
T ss_dssp             TCCTTCCCCCSSSC----SSCCCHHHHHHHHHHHHHCC-CSSBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHH
T ss_pred             hcCCCeEEccCCCC----CCCCCHHHHHHHHHHHhCCC-cCCCC--CCHHHHHHHHHHHHHhcCCCCCCcceEeeccchh
Confidence            45889999999996    58899999999999988654 47864  7899999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCcccChHHHHHhhc-CCccEEEEeCCCCccccC
Q 014769          119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNV  196 (419)
Q Consensus       119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~  196 (419)
                      ++..+++++++|||.|+++.|.|+.+...+...|...+.++... +..+.+|.+.++.+.. ++++++++++||||||.+
T Consensus       101 al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPTG~v  180 (394)
T d1c7na_         101 AVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRV  180 (394)
T ss_dssp             HHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBC
T ss_pred             hhhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEeccccccccee
Confidence            99999999999999999999999999999999998888776543 3456788888887764 468899999999999999


Q ss_pred             CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC--CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769          197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG--SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ  274 (419)
Q Consensus       197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  274 (419)
                      ++.+++++|+++|++++++||+||+|.++.|++....+.....  ...+++++.|+||.|+++|+|+||++++++     
T Consensus       181 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~-----  255 (394)
T d1c7na_         181 WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-----  255 (394)
T ss_dssp             CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-----
T ss_pred             ccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccCh-----
Confidence            9999999999999999999999999999999876554433322  235789999999999999999999999762     


Q ss_pred             hhhHHHHHHhhhccc-cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeec
Q 014769          275 KSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKL  352 (419)
Q Consensus       275 ~~~~~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~  352 (419)
                        .+.+.+....... ..+....+.++.........++.++.+..++++++.+.+.++. .+++. +..|++|+|+|+++
T Consensus       256 --~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~p~g~~~~~~~~  332 (394)
T d1c7na_         256 --DIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDF  332 (394)
T ss_dssp             --HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEEC
T ss_pred             --hhhhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhcccccee-ecCCCceeEEEEEC
Confidence              4556666554332 2333333333333333334678888888899999999988875 56777 45899999999998


Q ss_pred             CcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          353 NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       353 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      +...    .++.+++.+|++++||.+.||+.|+.  ++|+|||++.++++|++++++|++++++++
T Consensus       333 ~~~~----~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~eal~rl~~~l~~Lk  394 (394)
T d1c7na_         333 RALK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLK  394 (394)
T ss_dssp             GGGC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCC----CCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHHhcC
Confidence            7532    36889999999999999999999985  689999999899999999999999999863

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.3e-52  Score=396.27  Aligned_cols=377  Identities=22%  Similarity=0.288  Sum_probs=313.4

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI   93 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i   93 (419)
                      +.+....+.+.|+.++. +.+.. +..|.++|+|+.|+|.    +++++.+.+++.+...  ...+|+++.|.++||+++
T Consensus         2 ~~r~~~~~~~~i~~l~~-~a~~~-~~~g~~vi~l~~G~p~----~~~p~~~~~al~~~~~--~~~~Y~~~~G~~~LR~ai   73 (389)
T d2gb3a1           2 SDRVLLTEESPIRKLVP-FAEMA-KKRGVRIHHLNIGQPD----LKTPEVFFERIYENKP--EVVYYSHSAGIWELREAF   73 (389)
T ss_dssp             CHHHHSCCCCTTGGGHH-HHHHH-HHTTCEEEECSSCCCC----SCCCTHHHHHHHHTCC--SSCCCCCTTCCHHHHHHH
T ss_pred             ChhhhcCCCCHHHHHHH-HHHHH-HHcCCCEEECCCCCCC----CCCCHHHHHHHHhcCC--CCCCCCCCcCCHHHHHHH
Confidence            34556677788988876 33333 3458899999999974    6778889998877543  356899999999999999


Q ss_pred             HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      ++|+.+.+|..+++++|++|+|+++++..++.+++++||.|+++.|+|+.+...+...|.....++.+... +..+.+.+
T Consensus        74 a~~~~~~~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~  152 (389)
T d2gb3a1          74 ASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEE-GFAIPQNL  152 (389)
T ss_dssp             HHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGG-TSCCCTTG
T ss_pred             HHHHHHhcCCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCcccccccccccc-ccchhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999888875443 34445666


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR  253 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  253 (419)
                      .....++++++++++|+||||.+++.+++++|+++|++++++||+||+|..+.+++.......  ...++++++.|+||.
T Consensus       153 ~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~--~~~~~~~v~~s~sK~  230 (389)
T d2gb3a1         153 ESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALS--IESDKVVVIDSVSKK  230 (389)
T ss_dssp             GGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGG--SCCTTEEEEEESTTT
T ss_pred             hhhcccCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccc--ccccccccccccccc
Confidence            667777889999999999999999999999999999999999999999999998875543332  234578889999999


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      ++++|+|+||++++++       .+.............++...+.++..++.. ...+++++++.++++++.+.+.|+++
T Consensus       231 ~~~~GlRiG~~~~~~~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~  302 (389)
T d2gb3a1         231 FSACGARVGCLITRNE-------ELISHAMKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEH  302 (389)
T ss_dssp             TTCGGGCCEEEECSCH-------HHHHHHHHHHHHSCCCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCcccceeeeeccch-------hHHHHHhhhhhccccccccccccccccccc-cchhcccccccccccchhhhhhhhhh
Confidence            9999999999998762       344444444444556677777777777754 46789999999999999999999998


Q ss_pred             CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHh-----cCeEeecCCCCCC-----CCeEEEEeecCHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE-----ESVIVTPGIYVGL-----KNWLRIAFCAEPSALKD  403 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~  403 (419)
                      +... +..|++|+|+|++++.      .++.+++.+|+++     +||.+.||+.|+.     .+|+||+++.+++++++
T Consensus       303 ~~~~-~~~p~~g~~~~~~lp~------~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~~~l~~  375 (389)
T d2gb3a1         303 GLKR-FTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSR  375 (389)
T ss_dssp             TCCC-BCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHH
T ss_pred             cccc-ccCCCceEEEEEeCCC------CCHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEcCCHHHHHH
Confidence            5554 5589999999999975      2678899888876     4788999998864     47999999989999999


Q ss_pred             HHHHHHHHHHHHh
Q 014769          404 GLGRMKAFCQRHT  416 (419)
Q Consensus       404 ~l~~l~~~~~~~~  416 (419)
                      ++++|+++++++.
T Consensus       376 a~~~L~~~lk~f~  388 (389)
T d2gb3a1         376 AIDVLMEGLKMFC  388 (389)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999999875

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.3e-52  Score=391.30  Aligned_cols=350  Identities=23%  Similarity=0.347  Sum_probs=304.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA  119 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a  119 (419)
                      +.++|||+.|+|.    +++|+.+++++.+++.++ .++|+++.|.++||++||+|+++.+|...+++ +|++|+|++++
T Consensus        25 ~~~~i~l~~G~Pd----~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~a   99 (382)
T d1u08a_          25 QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA   99 (382)
T ss_dssp             HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHH
T ss_pred             cCCCEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHH
Confidence            4688999999974    677899999999998865 45899999999999999999999999888876 59999999999


Q ss_pred             HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      +..++++++++||.|++++|+|+.+...+...|.....++.+ ..++.+|+++++..+.++++++++++||||||.+++.
T Consensus       100 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~~  178 (382)
T d1u08a_         100 LYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQ-PPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQ  178 (382)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECC-TTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHhhcccccceEEEecccccchhhhhhhccccceecccc-cccccCCHHHHhhhhccCccEEEECCCCccccccccc
Confidence            999999999999999999999999999999999888877764 4567899999999999899999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      +++++|+++|.+++++++.|++|..+.+.+......... ...+++|++.|+||.+++||+|+||+++++        ++
T Consensus       179 ~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~--------~~  250 (382)
T d1u08a_         179 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PI  250 (382)
T ss_dssp             HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HH
T ss_pred             ccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccc--------hh
Confidence            999999999999999999999999988776443333222 234578999999999999999999999865        57


Q ss_pred             HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      ++.+..... ...+++.+.|.++..+++.. .+++..++..++++++.+.+.+... ++. +..|+||+|+|++++... 
T Consensus       251 ~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-g~~-~~~p~gg~~~~~~~~~~~-  326 (382)
T d1u08a_         251 SAEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS-  326 (382)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC-
T ss_pred             HHHHHhhhcccccccccccccccccccccc-hHHHHHHHHHHHhhhhhhhhhhccC-CcE-EecCCceEEEEEecCCCC-
Confidence            777766653 35778999999999999864 5789999999999999999998765 787 558999999999998532 


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHH
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                        ..++.+++.+|++++||.+.||+.|+.    .+|+|||++.++|+|++++++|++
T Consensus       327 --~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~~~e~l~~al~RL~~  381 (382)
T d1u08a_         327 --TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ  381 (382)
T ss_dssp             --CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred             --CCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHhC
Confidence              247889999999999999999999974    468999998899999999999875

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=3.3e-52  Score=395.41  Aligned_cols=384  Identities=21%  Similarity=0.289  Sum_probs=313.0

Q ss_pred             cccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCH
Q 014769           10 GFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIP   87 (419)
Q Consensus        10 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~   87 (419)
                      .+..+++.+..+.+.||+++. +.      .++++|||+.|.|+..  ..+.+.+.+++.+.+...  ...+|+++.|.+
T Consensus         4 ~~~~~~~~~~~~~s~ire~~~-~~------~~~~~i~l~~G~P~~~--~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~   74 (403)
T d1wsta1           4 DSFFSEKAMLMKASEVRELLK-LV------ETSDVISLAGGLPAPE--TFPVETIKKIAVEVLEEHADKALQYGTTKGFT   74 (403)
T ss_dssp             GGGCCHHHHHCCCHHHHHHHH-HH------TSSSCEECCCCCCCGG--GSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCH
T ss_pred             HHHHHHHHhcCCCcHHHHHHH-Hh------CCCCcEECCCCCCCcc--ccCHHHHHHHHHHHHHhCcccccCCCCCcCCH
Confidence            456778888888899998876 22      2678999999998742  335678888888876543  234799999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE  167 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  167 (419)
                      +||++||+|+++++|..+++++|++|+|+++++..++.+++++||.|++++|+|+.+...+...|.++..++.+....+.
T Consensus        75 ~lR~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~  154 (403)
T d1wsta1          75 PLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRV  154 (403)
T ss_dssp             HHHHHHHHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECH
T ss_pred             HHHHHHHHHHHHHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeecccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999876543322


Q ss_pred             cChHHHH-H---hhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769          168 VDLDAVE-A---LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP  243 (419)
Q Consensus       168 ~~~~~l~-~---~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  243 (419)
                      ....... .   ..+.....+++++|+||||.++|.+++++|+++|++|+++||+||+|..+.+++....++...+..++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~  234 (403)
T d1wsta1         155 DLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGR  234 (403)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSC
T ss_pred             ccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCc
Confidence            2222211 1   22234456778899999999999999999999999999999999999999999888777777777789


Q ss_pred             EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHH
Q 014769          244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRE  321 (419)
Q Consensus       244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~  321 (419)
                      +++++|+||.+ ++|+|+||+++++        ++++.+.... .....++...|.+...++.... ..++.+.++.++.
T Consensus       235 ~i~~~S~SK~~-~~G~RiG~~i~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (403)
T d1wsta1         235 VIYLGTFSKIL-APGFRIGWVAAHP--------HLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKP  305 (403)
T ss_dssp             EEEEEESTTTT-CGGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             EEEEcccccee-cCcccccccccch--------HHHHHHHHHHhhhccccccchhhhHHhhhhccccchhHHHHHHHHHH
Confidence            99999999997 5999999999965        5777776654 3345677777777777766543 5678888899999


Q ss_pred             HHHHHHHHhhcC--CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEee
Q 014769          322 SAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFC  395 (419)
Q Consensus       322 ~~~~l~~~l~~~--~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~  395 (419)
                      +++.+.+.|.+.  .++. +..|.+|+|+|+++++.     .+...++..| .++||.+.||+.|+.    ++++||+++
T Consensus       306 ~~~~~~~~L~~~~~~~~~-~~~p~gg~~~~~~~~~~-----~~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~~iRi~~~  378 (403)
T d1wsta1         306 RRDAMLEALEEYMPEGVE-WTKPEGGMFVRVTLPEG-----IDTKLMMERA-VAKGVAYVPGEAFFVHRDKKNTMRLNFT  378 (403)
T ss_dssp             HHHHHHHHHHHHCCTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHHHH-HHTTEECEEGGGGSTTCCCCSEEEEECS
T ss_pred             HHHHHHHHHHhhccCCeE-EeCCCceeEEEEECCCC-----CCHHHHHHHH-HHCCEEEEechhhcCCCCCCCEEEEEec
Confidence            999999999873  3455 55899999999999863     2344555554 677999999998864    579999996


Q ss_pred             -cCHHHHHHHHHHHHHHHHHHhcc
Q 014769          396 -AEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       396 -~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                       .+++++++++++|+++++++.||
T Consensus       379 ~~~~~~l~~al~rl~~~l~~~~k~  402 (403)
T d1wsta1         379 YVPEETIREGVRRLAETIKEEMKR  402 (403)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhc
Confidence             68999999999999999998875

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-51  Score=386.05  Aligned_cols=354  Identities=19%  Similarity=0.261  Sum_probs=293.4

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI  123 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~  123 (419)
                      +|+|++|+|    +||+|+.+++++.+.+..+.+ +|++..| +++|++|++++.+++|..+++++|++|+|+++++..+
T Consensus         1 ~~~~~~~~~----df~~p~~i~eal~~~~~~~~~-~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~   74 (361)
T d1d2fa_           1 LLPFTISDM----DFATAPCIIEALNQRLMHGVF-GYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL   74 (361)
T ss_dssp             CEECCSSSC----SSCCCHHHHHHHHHHHTTCCC-CCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHH
T ss_pred             CcCcCCCCC----CCCCCHHHHHHHHHHHhCCCC-CCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHH
Confidence            589999996    588999999999999877654 7998877 7899999999999999999999999999999999999


Q ss_pred             HHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHH
Q 014769          124 LSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHH  201 (419)
Q Consensus       124 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~  201 (419)
                      +.+++++||+|++++|+|..+...++..|..++.++.+. .+++.+|++.++..+.. +++++++++|+||||.+++.++
T Consensus        75 ~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~  154 (361)
T d1d2fa_          75 IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDE  154 (361)
T ss_dssp             HHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTH
T ss_pred             hhhccccccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhh
Confidence            999999999999999999999999999999998888764 34577999999988854 6789999999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769          202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS  281 (419)
Q Consensus       202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  281 (419)
                      +++|+++|+++++++|+||+|..+.|++....++.... .++++++.|+||.++++|+|+||++++++.      .....
T Consensus       155 ~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~------~~~~~  227 (361)
T d1d2fa_         155 LEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA-RGDWALLTSGSKSFNIPALTGAYGIIENSS------SRDAY  227 (361)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTC-CSSEEEEECSHHHHTCGGGCCEEEEECSHH------HHHHH
T ss_pred             hhhhhhhhhhhheeeeeccccccccccccccccccccc-ccccccccccccccccccccceeeecchhH------HHHHH
Confidence            99999999999999999999999998876666655544 357889999999999999999999886521      12222


Q ss_pred             HHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCccccc
Q 014769          282 IKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       282 l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      +......  ..+++...+.+....+.. ..++.++.+..++++++.+.+.+.+ .+++. +..|++|+|+|++++...  
T Consensus       228 ~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~p~gg~~~~~~l~~~~--  303 (361)
T d1d2fa_         228 LSALKGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRPLN--  303 (361)
T ss_dssp             HHHHHTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGGGC--
T ss_pred             hhhcccccccccchhhhHHHHHHHhhc-cchhhhcccccchhhHHHHHHHhhhhccccc-ccccCceeEEEEEccCCC--
Confidence            2222221  233444444444334433 3567788888888888888887765 56777 558999999999886432  


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~  416 (419)
                        .++.+++.+|++++||.|.||+.|+.  ++|+|||++.+++++++++++|++++++++
T Consensus       304 --~~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis~~~~~e~l~~al~rl~~~l~~lr  361 (361)
T d1d2fa_         304 --IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR  361 (361)
T ss_dssp             --CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             --CCHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHHhcC
Confidence              37889999999999999999999985  579999999899999999999999999864

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.5e-52  Score=395.75  Aligned_cols=379  Identities=20%  Similarity=0.286  Sum_probs=307.0

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPAR   90 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr   90 (419)
                      +++..+..+++.|++++.     +  ..++++|+|+.|.|..  ...+.+.+.+++.++++..  ...+|+++.|.++||
T Consensus        16 ~s~~~~~~~~s~ir~~~~-----~--~~~~~~I~l~~G~Pd~--~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR   86 (420)
T d1vp4a_          16 ISKIGQNMKSSIIREILK-----F--AADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLK   86 (420)
T ss_dssp             CCHHHHTCCCCCHHHHTT-----T--TTSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHH
T ss_pred             HhHHHHhCCCcHHHHHHH-----H--hCCCCcEecCCcCCCC--ccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHH
Confidence            555556667788888764     1  2478999999998863  2334577778877776543  235899999999999


Q ss_pred             HHHHHHHHhhCCCC-CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccC
Q 014769           91 RAIADYLSRDLPYK-LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVD  169 (419)
Q Consensus        91 ~~ia~~l~~~~~~~-~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  169 (419)
                      ++||+|+++.+|.. +++++|++|+|+++++..++.+++++||.|++++|+|+.+...++..|..+..++.++.   +++
T Consensus        87 ~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~---~~~  163 (420)
T d1vp4a_          87 QQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMD  163 (420)
T ss_dssp             HHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EEC
T ss_pred             HHHHHHHHHHhCCCCCCHHHeEeccchhhhHHHHHHhhhccccccccccccccchhHHHHHHhhhccccccccc---ccc
Confidence            99999999988875 78999999999999999999999999999999999999999999999999999987643   467


Q ss_pred             hHHHHHhhc---------CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          170 LDAVEALAD---------KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       170 ~~~l~~~~~---------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      ++.+...+.         ..+.++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.|++....+......
T Consensus       164 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~  243 (420)
T d1vp4a_         164 LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG  243 (420)
T ss_dssp             HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHC
T ss_pred             cchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCccccccccccc
Confidence            776654321         12334567799999999999999999999999999999999999999998776666656666


Q ss_pred             CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDT  318 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~  318 (419)
                      .+++++++|+||. +++|+|+||+++++        ++++.+..... ....++...|.+++.++.... .+++++.++.
T Consensus       244 ~~~~i~~~s~sk~-~~~G~RiG~~~~~~--------~~i~~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~  314 (420)
T d1vp4a_         244 PERVVLLNTFSKV-LAPGLRIGMVAGSK--------EFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIEL  314 (420)
T ss_dssp             TTTEEEEEESTTT-TCGGGCEEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHH
T ss_pred             ccceeEEeccccc-cccccccccccccc--------hhhhhhhhhhhhccccCchhhhhhhhhhcccccccccchhHHHH
Confidence            6788999999998 57999999999865        68888776643 345677888888888887644 4667777788


Q ss_pred             HHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeE
Q 014769          319 LRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWL  390 (419)
Q Consensus       319 ~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~  390 (419)
                      ++++++.+.+.|++    .+++. +..|++|+|+|+++++.     .++.++++. ++++||.+.||+.|+.    .+++
T Consensus       315 ~~~~~~~~~~~L~~~~~~~~g~~-~~~p~gg~f~~~~~~~~-----~d~~~~~~~-l~~~gV~v~PG~~F~~~~~~~~~i  387 (420)
T d1vp4a_         315 YRRKRTVMLNALEEYFSDIPGVK-WVKSEGGLFIWLTLPEG-----FDTWEMFEY-AKRKKVFYVPGRVFKVYDEPSPSM  387 (420)
T ss_dssp             HHHHHHHHHHHHHHHSTTSTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHHH-HHHHTEECEEGGGGCTTCCCCSEE
T ss_pred             hhhhcccchhhhhhhhccCCCcE-EecCCceEEEEEECCCC-----CCHHHHHHH-HHHCCeEEEechhhCCCCCCCCEE
Confidence            88888877777764    46787 55899999999999753     245566554 4778999999999975    4699


Q ss_pred             EEEee-cCHHHHHHHHHHHHHHHHHHhccC
Q 014769          391 RIAFC-AEPSALKDGLGRMKAFCQRHTKKH  419 (419)
Q Consensus       391 Ris~~-~~~~~l~~~l~~l~~~~~~~~~~~  419 (419)
                      |||++ .+++++++++++|+++++++.|+|
T Consensus       388 Rls~~~~~~e~l~~a~~rL~~~l~~~~~~~  417 (420)
T d1vp4a_         388 RLSFCLPPDEKIVEGIKRLREVVLEYGKEK  417 (420)
T ss_dssp             EEECSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCcCCHHHHHHHHHHHHHHHHHhhHhh
Confidence            99996 578999999999999999998875

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=1.6e-50  Score=386.17  Aligned_cols=359  Identities=19%  Similarity=0.344  Sum_probs=286.8

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHh------CC-----CCCCCCCCCCCHHHHHHHHHHHHhhCC--CCCCCC
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR------SG-----KFNCYATNSGIPPARRAIADYLSRDLP--YKLSAD  108 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~------~~-----~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~  108 (419)
                      ..+|+|+++.+.     ...+.+.+.+.+...      ..     ....|+++.|.++||++||+|+++.+|  +.++++
T Consensus        36 ~G~i~l~~~en~-----l~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~pe  110 (431)
T d1m7ya_          36 NGIIQMGLAENQ-----LCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN  110 (431)
T ss_dssp             TSBEECSSCCCC-----SCHHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG
T ss_pred             CcEEEeeccccc-----ccHHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCcc
Confidence            348999999743     234445444443111      00     123699999999999999999999877  456789


Q ss_pred             cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh-cCCEEEEEeccCCCCcccChHHHHHhhcC------Cc
Q 014769          109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADK------NT  181 (419)
Q Consensus       109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~  181 (419)
                      +|++|+|+++++..++.++++|||+|++++|+|+.+...+.. .|++++.++++.++++.+|++.++..+.+      ++
T Consensus       111 ~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  190 (431)
T d1m7ya_         111 HLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRV  190 (431)
T ss_dssp             GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCE
T ss_pred             eEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCcc
Confidence            999999999999999999999999999999999988777764 57899999998888889999988876642      56


Q ss_pred             cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC----------CCCcEEEEecCC
Q 014769          182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG----------SIVPVITLGSIS  251 (419)
Q Consensus       182 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~----------~~~~~i~~~s~s  251 (419)
                      +++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.|++..+.++..+.          ..+++++++|+|
T Consensus       191 ~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~S  270 (431)
T d1m7ya_         191 KGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLS  270 (431)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESS
T ss_pred             eEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCc
Confidence            7889999999999999999999999999999999999999999999876655543221          234799999999


Q ss_pred             CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHH
Q 014769          252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      |.|+++|+|+||+++++        +++.............+...+.++.+.+....  .+++++++.+++++++.+.+.
T Consensus       271 K~~~~~G~RiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~  342 (431)
T d1m7ya_         271 KDLGLPGFRVGAIYSND--------DMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSG  342 (431)
T ss_dssp             SSSCCGGGCEEEEEESC--------HHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCccceeccch--------hhhHHHHHHHhccccccccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhh
Confidence            99999999999999876        44444433333344556666666666654422  467888999999999999999


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCccccc-CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeec-CHHHHHHHH
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWLLE-DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCA-EPSALKDGL  405 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~-~~~~l~~~l  405 (419)
                      |++. |+. +..|++|+|+|++++..... ...++.+++.++++++||.+.||+.|+.  ++|+||+++. ++++|++++
T Consensus       343 L~~~-gi~-~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a~~~e~~l~~al  420 (431)
T d1m7ya_         343 LQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM  420 (431)
T ss_dssp             HHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHH
T ss_pred             hhcC-CcE-EecCCceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeCcCCHHHHHHHH
Confidence            9886 888 55899999999999753211 1124567889999999999999999976  6899999974 778999999


Q ss_pred             HHHHHHHHHH
Q 014769          406 GRMKAFCQRH  415 (419)
Q Consensus       406 ~~l~~~~~~~  415 (419)
                      ++|++++++|
T Consensus       421 ~rL~~~l~~~  430 (431)
T d1m7ya_         421 QRLKAFVGEY  430 (431)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999987

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=1.6e-49  Score=379.05  Aligned_cols=360  Identities=20%  Similarity=0.359  Sum_probs=287.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----------CCCCCCCCCCCHHHHHHHHHHHHhhCCC--CCCCC
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----------KFNCYATNSGIPPARRAIADYLSRDLPY--KLSAD  108 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----------~~~~Y~~~~g~~~lr~~ia~~l~~~~~~--~~~~~  108 (419)
                      +..+|+|+++.+.     ..+..+.+.+.+.....          ...+|+++.|.++||++||+|+++.+|.  .++++
T Consensus        35 p~G~i~l~~aen~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e  109 (428)
T d1iaya_          35 PNGVIQMGLAENQ-----LCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE  109 (428)
T ss_dssp             TTSBEECSSCCCC-----SSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT
T ss_pred             CCceEEeecccCc-----cchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChh
Confidence            3459999999742     23455555444322110          1247999999999999999999998874  46789


Q ss_pred             cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh-cCCEEEEEeccCCCCcccChHHHHHhh------cCCc
Q 014769          109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALA------DKNT  181 (419)
Q Consensus       109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~  181 (419)
                      +|++|+|+++++..++.+++++||.|++++|+|+.+...+.. .|++++.++++..+++.+|.+.+..++      ..++
T Consensus       110 ~Ivit~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  189 (428)
T d1iaya_         110 RVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKV  189 (428)
T ss_dssp             SCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCE
T ss_pred             hEEEcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCc
Confidence            999999999999999999999999999999999998776654 588999999888888999998876543      3457


Q ss_pred             cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc--------CCCCcEEEEecCCCc
Q 014769          182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--------GSIVPVITLGSISKR  253 (419)
Q Consensus       182 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~s~sK~  253 (419)
                      +++++++|+||||.+++.+++++|+++|++|+++||+||+|..+.|++..+.++..+        ...+++++++||||.
T Consensus       190 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~  269 (428)
T d1iaya_         190 KGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD  269 (428)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTT
T ss_pred             eEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCc
Confidence            789999999999999999999999999999999999999999999987766554322        234578999999999


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhh
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      |+++|+|+||+++.++       .+.+.++.... ....+...+.++.+.+....  .+++++.++.++++++.+.+.|+
T Consensus       270 ~~~~GlRiG~~~~~~~-------~l~~~~~~~~~-~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~  341 (428)
T d1iaya_         270 MGLPGFRVGIIYSFND-------DVVNCARKMSS-FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLE  341 (428)
T ss_dssp             SSCGGGCEEEEEESCH-------HHHHHHHHHHT-TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCccccccccccc-------chhhhhhhhhc-ccccccccccchhhhhhhhccccccccccccccchhHHHHHHHHH
Confidence            9999999999998652       45565555444 34556666666666665422  45778888899999999999998


Q ss_pred             cCCCCCCCCCCCceEEEEeecCccccc-CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeec-CHHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLE-DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCA-EPSALKDGLGR  407 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~-~~~~l~~~l~~  407 (419)
                      .. |+. +..|++|+|+|++++..... ...++.+++.+|++++||.+.||..|+.  ++|+||+++. ++++|++++++
T Consensus       342 ~~-gi~-~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~~~l~~al~R  419 (428)
T d1iaya_         342 VV-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALAR  419 (428)
T ss_dssp             HT-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHH
T ss_pred             hC-CCE-EecCCcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCHHHHHHHHHH
Confidence            76 888 55899999999999753211 1123457888999999999999999975  6899999964 67789999999


Q ss_pred             HHHHHHHH
Q 014769          408 MKAFCQRH  415 (419)
Q Consensus       408 l~~~~~~~  415 (419)
                      |++++...
T Consensus       420 l~~~l~~~  427 (428)
T d1iaya_         420 IRRFVGVE  427 (428)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhhc
Confidence            99999754

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.7e-50  Score=374.43  Aligned_cols=357  Identities=27%  Similarity=0.414  Sum_probs=296.3

Q ss_pred             hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769           15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA   94 (419)
Q Consensus        15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia   94 (419)
                      .+....+. .+...+..+.+.      .++|||+.|+|    .+|+++.+++++.+++..  .++|+++.|.++||++||
T Consensus         5 ~~~~~~~~-~~~~~~~~la~~------~~~I~ls~g~p----~~~~p~~i~~al~~~l~~--~~~Y~~~~G~~elr~aiA   71 (368)
T d1v2da_           5 PRTEAAKE-SIFPRMSGLAQR------LGAVNLGQGFP----SNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALA   71 (368)
T ss_dssp             GGGGGC----CHHHHHHHHHH------HTCEECCCCSC----SSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHH
T ss_pred             hhhhhcCC-CHHHHHHHHhcc------CCCEEecCCCC----CCCCCHHHHHHHHHHhhc--ccCCCCCcCCHHHHHHHH
Confidence            33444444 555555555542      35899999996    467889999999998865  358999999999999999


Q ss_pred             HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCcccChHHH
Q 014769           95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEVDLDAV  173 (419)
Q Consensus        95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l  173 (419)
                      +++      ++++++|++|+|+++++..++.+++.+||.|++++|+|..+...+...|..++.++++. .+++.+|++.+
T Consensus        72 ~~~------~~~~~~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l  145 (368)
T d1v2da_          72 EEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSAL  145 (368)
T ss_dssp             HHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHH
T ss_pred             hhc------ccCCcceeeccchHHHHHHHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHH
Confidence            998      68899999999999999999999999999999999999999999999999998888754 34678999999


Q ss_pred             HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc
Q 014769          174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR  253 (419)
Q Consensus       174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  253 (419)
                      +++++++++.+++++||||||.+++.+++++|+++|+++++++|+|++|..+.+.......  .....++.+++.|+||.
T Consensus       146 ~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~sk~  223 (368)
T d1v2da_         146 EKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRL--REFAPERTFTVGSAGKR  223 (368)
T ss_dssp             HTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCH--HHHCTTTEEEEEEHHHH
T ss_pred             HHhhccCceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhccccccccc--ccccccccceeeccccc
Confidence            9999989999999999999999999999999999999999999999999987665443322  22233467888899999


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhh
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      ++++|+|+||+++++        ++++.+..... ...+++.+.|.++..++.... .+++++.++.++++++.+.+.|+
T Consensus       224 ~~~~G~R~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~  295 (368)
T d1v2da_         224 LEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLR  295 (368)
T ss_dssp             TTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccc--------cccchhhhhhhccccccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHH
Confidence            999999999999876        46666666543 356778888888888886533 46788889999999999999999


Q ss_pred             cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGR  407 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~  407 (419)
                      ++ |+. +..|++|+|+|++++..      +.    .++++++||.+.||+.|+.    ++++|||++.+++++++++++
T Consensus       296 ~~-g~~-~~~p~g~~~~~~~l~~~------~~----~~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~~~e~i~~ai~r  363 (368)
T d1v2da_         296 AM-GLR-VYVPEGTYFLMAELPGW------DA----FRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALER  363 (368)
T ss_dssp             HT-TCC-EECCSBSSEEEEECTTC------CH----HHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHH
T ss_pred             hc-CcE-EecCCceeEEEEeCCcc------HH----HHHHHhCCEEEEechhhCCCCCCCCEEEEEecCCHHHHHHHHHH
Confidence            88 888 55899999999999742      33    2457889999999999864    589999998889999999999


Q ss_pred             HHHHH
Q 014769          408 MKAFC  412 (419)
Q Consensus       408 l~~~~  412 (419)
                      |++++
T Consensus       364 L~~~l  368 (368)
T d1v2da_         364 LGRVV  368 (368)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            99874

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=1.1e-48  Score=370.45  Aligned_cols=374  Identities=14%  Similarity=0.095  Sum_probs=295.7

Q ss_pred             cCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHH
Q 014769           12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPAR   90 (419)
Q Consensus        12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr   90 (419)
                      ++++.+.++++++|+.++++..+    ...+++|||++|.+. ..+..+..+.|+++..+.+.++...+|+++.|.++||
T Consensus         2 ~~~~~~~~~p~d~i~~~~~~~~~----d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr   77 (401)
T d7aata_           2 SWWSHVEMGPPDPILGVTEAFKR----DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFT   77 (401)
T ss_dssp             CSSTTCCCCCCCHHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHH
T ss_pred             CccccCCCCCCChHHHHHHHHhC----CCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHH
Confidence            56677788899999998876543    446778999999421 1233456789999988888777666899999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCcEEEcccHH-----HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769           91 RAIADYLSRDLPYKLSADDVYVTLGCK-----QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN  165 (419)
Q Consensus        91 ~~ia~~l~~~~~~~~~~~~i~~t~g~~-----~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  165 (419)
                      ++|++++.+.++....+++|+++.++.     .++..+++.+++|||+|++++|+|+.|...+...|.+++.+++.++++
T Consensus        78 ~aia~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~  157 (401)
T d7aata_          78 RASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKT  157 (401)
T ss_dssp             HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTT
T ss_pred             HHHHHHHhccCCcccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEecccccc
Confidence            999999998888777888887764433     567778888999999999999999999999999999999999988888


Q ss_pred             cccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc---cccC
Q 014769          166 WEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM---GLFG  239 (419)
Q Consensus       166 ~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~---~~~~  239 (419)
                      +..+.+.+.+.+.   ++++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.|++....+.   ....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~  237 (401)
T d7aata_         158 CSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIE  237 (401)
T ss_dssp             TEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred             ccccHHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhh
Confidence            8899988877663   467888999999999999999999999999999999999999999999876432221   1122


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH----hh-hccccCCchHHHHHHHHHHcccc-----h
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK----DC-LSIYSDIPTFIQGAIPQILEKTK-----E  309 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~----~~-~~~~~~~~~~~~~a~~~~l~~~~-----~  309 (419)
                      ...+++++.|+||.++++|+|+||++++...  .   +....+.    .. ......++...|.++..++....     .
T Consensus       238 ~~~~~~~~~s~sk~~~~~G~RiG~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~  312 (401)
T d7aata_         238 QGIDVVLSQSYAKNMGLYGERAGAFTVICRD--A---EEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWL  312 (401)
T ss_dssp             TTCCCEEEEECTTTSCCGGGCEEEEEEECSS--H---HHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHH
T ss_pred             hhcccceeEeccccceeeccccceeecchHH--H---HHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHH
Confidence            3346788899999999999999999997631  1   1111111    11 12345667788888888776522     2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCC---CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769          310 DFFCKLIDTLRESAEICYDGVKEIPC---ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL  386 (419)
Q Consensus       310 ~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~  386 (419)
                      .++++++++++++++.+.+.|+++..   +. +..|++|||+|+.++          .+++++|++++||.+.||+    
T Consensus       313 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~ls----------~e~~~~L~~e~gV~~~pg~----  377 (401)
T d7aata_         313 VEVKGMADRIISMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKDG----  377 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCCcc-eECCCCeEEEecCCC----------HHHHHHHHHhCCEEECCCc----
Confidence            45677888899999999999988521   33 337899999997653          4568899999999999985    


Q ss_pred             CCeEEEEee-cCHHHHHHHHHHHHHHHH
Q 014769          387 KNWLRIAFC-AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       387 ~~~~Ris~~-~~~~~l~~~l~~l~~~~~  413 (419)
                          |||++ .++++|+.+.++|.++++
T Consensus       378 ----Ris~a~~~~~~i~~la~ai~~v~k  401 (401)
T d7aata_         378 ----RISVAGVASSNVGYLAHAIHQVTK  401 (401)
T ss_dssp             ----EEEGGGCCTTTHHHHHHHHHHHHC
T ss_pred             ----EEEeccCCHHHHHHHHHHHHHHhC
Confidence                99994 788999998888888763

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=2.1e-45  Score=342.41  Aligned_cols=333  Identities=17%  Similarity=0.285  Sum_probs=273.5

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      +.++|||+.|.+    .+++++.+++++.+.+..  ...|++ .+..+||++||+++      ++++++|++++|+++++
T Consensus        21 p~~~idls~~~n----p~~~p~~~~~a~~~~~~~--~~~Yp~-~~~~~Lr~aia~~~------~v~~~~I~~~~g~~~~~   87 (355)
T d1lc5a_          21 PDQLLDFSANIN----PLGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESI   87 (355)
T ss_dssp             GGGSEECSSCCC----TTCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred             hhheEEccCCCC----CCCCCHHHHHHHHHHHHH--hccCCC-CChHHHHHHHHHHh------CCCHHHEEecccHHHHH
Confidence            457999999953    245678899999887654  457865 47799999999998      68899999999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH  200 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  200 (419)
                      ..++..+.  ++.+++..|.|..|.......+..+..++++.++++.++ +.+.+.+.++++++++++||||||.+++.+
T Consensus        88 ~~~~~~~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~l~nP~NPtG~~~~~e  164 (355)
T d1lc5a_          88 FTVASGLK--PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERP  164 (355)
T ss_dssp             HHHHHHHC--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHhhhc--cccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccccccceeeeecccCcccccchhh
Confidence            99888774  566777889999898889999999999998877777766 456667778899999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769          201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID  280 (419)
Q Consensus       201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  280 (419)
                      ++++|+++|+++++++|+||+|..+.+.+.....  .....++++++.|+||.|+++|+|+||++++++       .+.+
T Consensus       165 ~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~-------~~~~  235 (355)
T d1lc5a_         165 LLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD-------AAMA  235 (355)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGG--GCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH-------HHHH
T ss_pred             hhhhhhhhccccccccccccceeeeeeecccccc--cccccccceeecccccccccccccccceeccch-------hhhH
Confidence            9999999999999999999999998766544332  234456899999999999999999999998751       2334


Q ss_pred             HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769          281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI  360 (419)
Q Consensus       281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~  360 (419)
                      .++... .++..+.+++.++..+++.  ..++.+.+++++++++++.+.|.+++++. + .|.+|+|+|++++.      
T Consensus       236 ~~~~~~-~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~p~~~~f~~~~~~~------  304 (355)
T d1lc5a_         236 RMRRQQ-MPWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER------  304 (355)
T ss_dssp             HHHHHS-CTTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC------
T ss_pred             HHHhhc-CCccccccccccccccccc--cchhHHHHHHHHHHHHHHHHHHhhcCCcE-E-CCCCCEEEEEECCC------
Confidence            444333 3467788899998888875  57788889999999999999999987776 5 68889999999874      


Q ss_pred             CCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769          361 NDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       361 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~  412 (419)
                       ++.+++..| .++||.|+||..|..  ++|+||+++ +++++++++++|++++
T Consensus       305 -~~~~~~~~L-~~~gv~vr~~~~f~~~~~~~iRis~~-~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         305 -EDIDLQRRL-LTQRILIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVL  355 (355)
T ss_dssp             -TTCCHHHHH-HTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC
T ss_pred             -CHHHHHHHH-HHCCcEEEeCccCCCCCCCEEEEEeC-CHHHHHHHHHHHHHhC
Confidence             455677676 567999999998864  689999997 5788899999988764

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=3.4e-45  Score=347.44  Aligned_cols=376  Identities=14%  Similarity=0.103  Sum_probs=282.0

Q ss_pred             chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHHHHhCC-CCCCCCCCCCCHHH
Q 014769           14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVDAVRSG-KFNCYATNSGIPPA   89 (419)
Q Consensus        14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~g~~~l   89 (419)
                      .+.+.+.+++.|..++.++.    +...+++|||++|   ++.  +..++.|.|+++......+. ..++|++..|.++|
T Consensus         6 ~~~~~~~~~~~i~~l~~~~~----~d~~~~~Inl~iG~~~d~~--g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~l   79 (412)
T d1ajsa_           6 FAEVPQAQPVLVFKLIADFR----EDPDPRKVNLGVGAYRTDD--CQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEF   79 (412)
T ss_dssp             TTTCCCCCCCHHHHHHHHHH----TCCCTTCEECCSCCCCCTT--SCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHH
T ss_pred             hhhCCcCCCChHHHHHHHHh----cCCCCCcEEeeCCCCcCCC--CCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHH
Confidence            34467788888988887654    3456788999999   432  23456688888876655443 34579999999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCcE--EEcccHHHHHHHHHHHh-------cCCCCeEEeeCCCCCCcHHHHhhcCCEEEE-Ee
Q 014769           90 RRAIADYLSRDLPYKLSADDV--YVTLGCKQAVEVILSVL-------ARPGANVLLPRPGWPYYEGIAQRKQVEVRH-FD  159 (419)
Q Consensus        90 r~~ia~~l~~~~~~~~~~~~i--~~t~g~~~al~~~~~~l-------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~-~~  159 (419)
                      |+++++++.+.++..++.+++  +.|.|++.++..+..++       .+|||+|++++|+|+.|...++..|.+.+. .+
T Consensus        80 reaia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~  159 (412)
T d1ajsa_          80 RTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYR  159 (412)
T ss_dssp             HHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEE
T ss_pred             HHHHHHHHhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeec
Confidence            999999998877766667765  44666666665554443       689999999999999999999999987554 44


Q ss_pred             ccCCCCcccChHHHHHhh---cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC--
Q 014769          160 LLPERNWEVDLDAVEALA---DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP--  234 (419)
Q Consensus       160 ~~~~~~~~~~~~~l~~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~--  234 (419)
                      ...++.+..|++.+++.+   .++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.|++.....  
T Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~  239 (412)
T d1ajsa_         160 YWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWA  239 (412)
T ss_dssp             CEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred             ccccccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhh
Confidence            444556678888776653   456778889999999999999999999999999999999999999999987643211  


Q ss_pred             -ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc----
Q 014769          235 -MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK----  308 (419)
Q Consensus       235 -~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~----  308 (419)
                       .........++++.|+||.++++|+|+||++++.... .....+...+... .....+++...|.++..++....    
T Consensus       240 ~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (412)
T d1ajsa_         240 IRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEP-DSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHE  318 (412)
T ss_dssp             HHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSH-HHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHH
T ss_pred             hhhhhhhcccccccccccccccCCCCCccccccchhHH-HHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHH
Confidence             1222334567889999999999999999999976321 0000111122222 23345677888888887776421    


Q ss_pred             -hHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC
Q 014769          309 -EDFFCKLIDTLRESAEICYDGVKEIP--C-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV  384 (419)
Q Consensus       309 -~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~  384 (419)
                       .++++.++++++++++.+.+.|+++.  + +. +..+.+|||.|+.++          .+++.+|++++||++.||+  
T Consensus       319 ~~~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~-~i~~~~G~F~~~~ls----------~~~v~~L~~e~gV~~vpg~--  385 (412)
T d1ajsa_         319 WTGNVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPSG--  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTTS--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCee-eecCCCeEEEecCCC----------HHHHHHHHHhCCEEEeCCC--
Confidence             34567788899999999999998862  1 22 236789999997653          4567889999999999985  


Q ss_pred             CCCCeEEEEe-ecCHHHHHHHHHHHHHHHHHH
Q 014769          385 GLKNWLRIAF-CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       385 ~~~~~~Ris~-~~~~~~l~~~l~~l~~~~~~~  415 (419)
                            ||++ +.++++++.+.++|+++++++
T Consensus       386 ------Ri~~ag~~~~~i~~~a~aI~~av~~~  411 (412)
T d1ajsa_         386 ------RINMCGLTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             ------EEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             ------eEEeccCCHHHHHHHHHHHHHHHHhc
Confidence                  9999 578999999999999999875

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=1.6e-44  Score=342.35  Aligned_cols=377  Identities=14%  Similarity=0.130  Sum_probs=286.6

Q ss_pred             CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHHHHhCC-CCCCCCCCCCCHH
Q 014769           13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVDAVRSG-KFNCYATNSGIPP   88 (419)
Q Consensus        13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~g~~~   88 (419)
                      ..+++...+++.|..+++...    +++.+++|||++|   ++.  +..++.+.|+++......+. ..++|++..|.++
T Consensus         4 ~~~~~~~~~~d~i~~~~~~~~----~d~~~~kInL~iG~~~d~~--g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~   77 (412)
T d1yaaa_           4 LFNNIELLPPDALFGIKQRYG----QDQRATKVDLGIGAYRDDN--GKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPS   77 (412)
T ss_dssp             TTTTCCCCCCCTTHHHHHHHH----TCCCSSCEECSSCCCBCTT--SCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHH
T ss_pred             hhhcCCcCCCChHHHHHHHHh----cCCCCCcEEeecCCCcCCC--CCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHH
Confidence            445567788889988776543    4456778999999   332  23455688888765544333 3457999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCcEEE--cccHHHHHHHHH--HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC
Q 014769           89 ARRAIADYLSRDLPYKLSADDVYV--TLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER  164 (419)
Q Consensus        89 lr~~ia~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~  164 (419)
                      ||+++++++.+.++.....+.+++  +.|+..++..++  ..+..+||.|++++|+|+.|...+...|..+..++...++
T Consensus        78 lr~aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~  157 (412)
T d1yaaa_          78 LTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANE  157 (412)
T ss_dssp             HHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETT
T ss_pred             HHHHHHHHHhcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecccccccc
Confidence            999999999887775555555444  344555544443  3456799999999999999999999999999999988778


Q ss_pred             CcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc------
Q 014769          165 NWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM------  235 (419)
Q Consensus       165 ~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~------  235 (419)
                      ++..+.+.+...+.   +.++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....+.      
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~  237 (412)
T d1yaaa_         158 TKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGV  237 (412)
T ss_dssp             TTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHH
T ss_pred             cccccchhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhh
Confidence            88888888777654   345678889999999999999999999999999999999999999999976433221      


Q ss_pred             cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh----h-hccccCCchHHHHHHHHHHcccc--
Q 014769          236 GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD----C-LSIYSDIPTFIQGAIPQILEKTK--  308 (419)
Q Consensus       236 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~~~a~~~~l~~~~--  308 (419)
                      ......++++++.|+||.++++|+|+||++++.+.. .......+.+..    . .....+++...|.++..++....  
T Consensus       238 ~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~  316 (412)
T d1yaaa_         238 EKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQ-AQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELT  316 (412)
T ss_dssp             HHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSC-TTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHH
T ss_pred             hccccCCCeEEEEecCCccccCcCceEEEEEchhhh-hhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHH
Confidence            223445678999999999999999999999986421 111112222221    1 23456778889999988887632  


Q ss_pred             ---hHHHHHHHHHHHHHHHHHHHHhhcC--CC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC
Q 014769          309 ---EDFFCKLIDTLRESAEICYDGVKEI--PC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI  382 (419)
Q Consensus       309 ---~~~~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~  382 (419)
                         .++++.++.+++++++.+.+.|+++  ++ +. +..|++|||+|+.++          .+++++|++++||.+.||+
T Consensus       317 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~~~~gG~F~~~~ls----------~e~~~~L~~e~~V~~~~g~  385 (412)
T d1yaaa_         317 EQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT----------PQMVKRLEETHAVYLVASG  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc-eeCCCceEEEecCcC----------HHHHHHHHHhCCEEECCCC
Confidence               2457778889999999999999875  22 33 447899999997653          4578899999999999875


Q ss_pred             CCCCCCeEEEEe-ecCHHHHHHHHHHHHHHHHHH
Q 014769          383 YVGLKNWLRIAF-CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       383 ~~~~~~~~Ris~-~~~~~~l~~~l~~l~~~~~~~  415 (419)
                              ||++ +.++++++.+.++|+++++.+
T Consensus       386 --------Ris~~g~~~~~i~~l~~ai~~v~k~~  411 (412)
T d1yaaa_         386 --------RASIAGLNQGNVEYVAKAIDEVVRFY  411 (412)
T ss_dssp             --------EEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             --------EEEeccCCHHHHHHHHHHHHHHHHhh
Confidence                    9999 578899999999999988865

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-45  Score=345.89  Aligned_cols=368  Identities=17%  Similarity=0.137  Sum_probs=269.1

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD   95 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   95 (419)
                      +.+++++.|+.+++.+.    ++..+++|||++|.+. ..+..+..+.|++++.+.+.++..+.|++..|+++||+++++
T Consensus         5 ~~~~p~d~i~~~~~~~~----~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~   80 (396)
T d2q7wa1           5 ITAAPADPILGLADLFR----ADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE   80 (396)
T ss_dssp             CCCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred             cccCCCChHHHHHHHHh----ccCCCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHH
Confidence            34567778888876543    3346678999999321 123356678999999888877766789999999999999999


Q ss_pred             HHHhhCCCCCCCCcE--EEcccHHHHHHHHHH--HhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChH
Q 014769           96 YLSRDLPYKLSADDV--YVTLGCKQAVEVILS--VLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLD  171 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i--~~t~g~~~al~~~~~--~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  171 (419)
                      |+.++++....++.+  +++.|++.++..++.  ....+||.|++++|+|+.|...+...|.+++.++...++++..+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~  160 (396)
T d2q7wa1          81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD  160 (396)
T ss_dssp             HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred             HHHhhcCCcccccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEecccccccccccccc
Confidence            998877766666554  456666666555544  4468999999999999999999999999999999888777777777


Q ss_pred             HHHHhh---cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc--cCCCCcEEE
Q 014769          172 AVEALA---DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL--FGSIVPVIT  246 (419)
Q Consensus       172 ~l~~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~~~i~  246 (419)
                      .+....   .++++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.|++........  ....+++++
T Consensus       161 ~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~  240 (396)
T d2q7wa1         161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV  240 (396)
T ss_dssp             HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred             hHHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccc
Confidence            666543   346778889999999999999999999999999999999999999999987543322211  122346788


Q ss_pred             EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccc-----hHHHHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTK-----EDFFCKLI  316 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~  316 (419)
                      +.|+||.++++|+|+||++++...  .   +........     .....+++...|.++..++....     .+++++++
T Consensus       241 ~~s~sk~~~~~G~R~G~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~  315 (396)
T d2q7wa1         241 ASSYSKNFGLYNERVGACTLVAAD--S---ETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMR  315 (396)
T ss_dssp             EEECTTTTTCGGGCCEEEEEECSS--H---HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-
T ss_pred             cccccccccccCCCccccccchhH--H---HHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence            889999999999999999997632  1   111121111     23345677778888877776421     35677888


Q ss_pred             HHHHHHHHHHHHHhhcCC-C--CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEE
Q 014769          317 DTLRESAEICYDGVKEIP-C--ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA  393 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~-~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris  393 (419)
                      ++++++++.+.+.|+++. .  +. +..+.+|+|.|+.++          .+++.+|++++||.+.||+        ||+
T Consensus       316 ~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~l~----------~e~~~~L~~e~gV~~~~g~--------Ri~  376 (396)
T d2q7wa1         316 QRIQRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLT----------KEQVLRLREEFGVYAVASG--------RVN  376 (396)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTC--------EEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCcc-eecCCCeEEEeeCCC----------HHHHHHHHHhCCEEECCCC--------EEE
Confidence            999999999999998862 1  33 336788999997663          3568899999999999986        999


Q ss_pred             e-ecCHHHHHHHHHHHHHHH
Q 014769          394 F-CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       394 ~-~~~~~~l~~~l~~l~~~~  412 (419)
                      + +.++++|+.+.++|++++
T Consensus       377 ~a~l~~~~i~~~~~ai~~v~  396 (396)
T d2q7wa1         377 VAGMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             GGGCCTTTHHHHHHHHHHHC
T ss_pred             ecCCCHHHHHHHHHHHHHhC
Confidence            9 468899999999988763

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-45  Score=348.24  Aligned_cols=369  Identities=15%  Similarity=0.095  Sum_probs=279.3

Q ss_pred             CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHH
Q 014769           20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRS-GKFNCYATNSGIPPARRAIADYL   97 (419)
Q Consensus        20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l   97 (419)
                      .+.++|..+++.+.    +...+++|||++|.+. ..+..|..+.|++|....... .....|+|..|+++||+++++++
T Consensus         8 ~~~dpi~~~~~~~~----~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~~   83 (397)
T d3tata_           8 YAGDPILTLMERFK----EDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLL   83 (397)
T ss_dssp             CCCCTTTTHHHHHH----HSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHh----cCCCCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHHH
Confidence            34556777776543    3446678999999422 112345678888887655433 23457999999999999999999


Q ss_pred             HhhCCCCCCCCcEEEcccHHHH----HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769           98 SRDLPYKLSADDVYVTLGCKQA----VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV  173 (419)
Q Consensus        98 ~~~~~~~~~~~~i~~t~g~~~a----l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  173 (419)
                      .+.++..+++++|+++.+++++    +..++..+..|||+|++++|+|+.|...++..|.+++.+++..++++..+.+.+
T Consensus        84 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~~  163 (397)
T d3tata_          84 FGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDL  163 (397)
T ss_dssp             TCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHHHH
T ss_pred             hhccCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccchHHH
Confidence            9888888888999887766654    556666678899999999999999999999999999999998888888888887


Q ss_pred             HHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc--cccCCCCcEEEEe
Q 014769          174 EALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM--GLFGSIVPVITLG  248 (419)
Q Consensus       174 ~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~~~i~~~  248 (419)
                      .+.+.   ++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....+.  .......+++++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~  243 (397)
T d3tata_         164 LATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSN  243 (397)
T ss_dssp             HHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECB
T ss_pred             HHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEe
Confidence            76654   456788899999999999999999999999999999999999999999875432221  1123345789999


Q ss_pred             cCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc-----hHHHHHHHHHHHHH
Q 014769          249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDTLRES  322 (419)
Q Consensus       249 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~  322 (419)
                      |+||.++++|+|+||++++...... ...+...+... .....+++...|.++..++....     .++++.++++++++
T Consensus       244 s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (397)
T d3tata_         244 SFSKIFSLYGERVGGLSVMCEDAEA-AGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAM  322 (397)
T ss_dssp             CCHHHHTBTTTCCBCCEEECSSTTH-HHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcccccccCccccccccchhHHHH-HHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999987632111 00111112111 23345667778888777776522     24556667788888


Q ss_pred             HHHHHHHhhcC-CC--CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCH
Q 014769          323 AEICYDGVKEI-PC--ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEP  398 (419)
Q Consensus       323 ~~~l~~~l~~~-~~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~  398 (419)
                      ++.+.+.|..+ +.  +. +..|++|+|+|+.++          .+++++|++++||.+.||+        ||++ +.++
T Consensus       323 r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~ls----------~e~~~~L~~e~~V~l~~g~--------Ri~~a~~~~  383 (397)
T d3tata_         323 RQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS----------AAQVDRLREEFGVYLIASG--------RMCVAGLNT  383 (397)
T ss_dssp             HHHHHHTTTTTCTTSCTT-HHHHCCSSBCCCCCC----------HHHHHHHTTTTCEECCSSS--------CCBTTSCCT
T ss_pred             HHHHHHHHHHhCCCCceE-EEcCCCceEEecCcC----------HHHHHHHHHhCCEEeCCCC--------EEEeccCCH
Confidence            88888888764 22  44 347899999998763          4567899999999999985        9998 6788


Q ss_pred             HHHHHHHHHHHHHH
Q 014769          399 SALKDGLGRMKAFC  412 (419)
Q Consensus       399 ~~l~~~l~~l~~~~  412 (419)
                      ++|+.+.++|++++
T Consensus       384 ~~i~~~~~ai~~v~  397 (397)
T d3tata_         384 ANVQRVAKAFAAVM  397 (397)
T ss_dssp             TTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999988888763

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=8.9e-44  Score=336.01  Aligned_cols=371  Identities=15%  Similarity=0.118  Sum_probs=276.0

Q ss_pred             hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769           17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD   95 (419)
Q Consensus        17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~   95 (419)
                      ++.++++.|..++.++.+    +..+++|||++|.+. ..+..++.|.|++++.+.+++...++|++..|+++||+++++
T Consensus         5 ~~~~~~d~i~~l~~~~~~----d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~   80 (394)
T d2ay1a_           5 LKPQAPDKILALMGEFRA----DPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE   80 (394)
T ss_dssp             CCCCCCCSHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHhC----CCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHH
Confidence            456677889888876543    456778999999421 123345678999999888877665689999999999999999


Q ss_pred             HHHhhCCCCCCCCcEEEcccH-HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769           96 YLSRDLPYKLSADDVYVTLGC-KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i~~t~g~-~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  174 (419)
                      ++.+..+....++.+++++|+ ..++...+..+.++||.|++++|+|+.|...++..|.+++.++...+.++..+.+.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  160 (394)
T d2ay1a_          81 LILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMK  160 (394)
T ss_dssp             HHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHH
T ss_pred             HHhccccccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHH
Confidence            998766654444444444443 4446666677788999999999999999999999999999999877767777766665


Q ss_pred             Hhh---cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc--cCCCCcEEEEec
Q 014769          175 ALA---DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL--FGSIVPVITLGS  249 (419)
Q Consensus       175 ~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~~~i~~~s  249 (419)
                      ...   .++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....+...  .....+++++.|
T Consensus       161 ~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s  240 (394)
T d2ay1a_         161 ADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAAS  240 (394)
T ss_dssp             HHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred             HHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhccccccccc
Confidence            543   345667778899999999999999999999999999999999999999987643322211  122346788999


Q ss_pred             CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc-----hHHHHHHHHHHHHHH
Q 014769          250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDTLRESA  323 (419)
Q Consensus       250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~  323 (419)
                      +||.++++|+|+||++++...... .......+... ......++...|..+..++....     .++++.++.++++++
T Consensus       241 ~sk~~~~~G~R~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r  319 (394)
T d2ay1a_         241 CSKNFGIYRERTGCLLALCADAAT-RELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLR  319 (394)
T ss_dssp             CTTTTTCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCcccccchhhchhHHHH-HHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997632100 00011111111 12345566667777766665421     355667788899999


Q ss_pred             HHHHHHhhcC--CC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHH
Q 014769          324 EICYDGVKEI--PC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPS  399 (419)
Q Consensus       324 ~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~  399 (419)
                      +.+.+.|+++  ++ +. +..|++|||+|+.++          .+++++|++++||++.||.        ||++ +.+++
T Consensus       320 ~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~ls----------~~~~~~L~~~~~V~~~~g~--------Ri~~a~l~~~  380 (394)
T d2ay1a_         320 EQLAGELRDLSGSDRFG-FVAEHRGMFSRLGAT----------PEQVKRIKEEFGIYMVGDS--------RINIAGLNDN  380 (394)
T ss_dssp             HHHHHHHHHHHTSSTTT-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTT
T ss_pred             HHHHHHHHHhCCCCcee-eECCCceeEEecCcC----------HHHHHHHHHhCCEEecCCC--------EEEecCCCHH
Confidence            9999999874  22 33 447899999998663          4567899999999999985        9999 57888


Q ss_pred             HHHHHHHHHHHH
Q 014769          400 ALKDGLGRMKAF  411 (419)
Q Consensus       400 ~l~~~l~~l~~~  411 (419)
                      +|+.+.++|.++
T Consensus       381 ~i~~l~~ai~~v  392 (394)
T d2ay1a_         381 TIPILARAIIEV  392 (394)
T ss_dssp             THHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            998888888765

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.6e-42  Score=318.26  Aligned_cols=324  Identities=19%  Similarity=0.302  Sum_probs=256.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA  119 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a  119 (419)
                      .+...|.|+.+...    +++++.+        ....+++|+++ +..+||++||+++      ++++++|++|+|++++
T Consensus        25 ~~~~~i~L~~ne~p----~~~~~~~--------~~~~l~rYPd~-~~~~Lr~~ia~~~------gv~pe~I~it~Gs~ea   85 (354)
T d1fg7a_          25 GGNGDVWLNANEYP----TAVEFQL--------TQQTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEG   85 (354)
T ss_dssp             TTTCSEECSSCCCS----SCCCCCC--------CCCCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred             CCCCCEEeeCCCCC----CCCCHHH--------HHHHHhcCCCC-cHHHHHHHHHHHh------CCChHHeeeccCchHH
Confidence            35678999988421    2222222        22345689765 5689999999999      7899999999999999


Q ss_pred             HHHHHHHhcCCCC-eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          120 VEVILSVLARPGA-NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       120 l~~~~~~l~~~gd-~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      +..+++++++||| .|+++.|+|..+...++..|.++..++.+  ++|.+|++.++..+. +++++++++||||||.+++
T Consensus        86 i~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~--~~~~~d~~~l~~~~~-~~~~v~~~~pnNPtG~~~~  162 (354)
T d1fg7a_          86 IELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLIN  162 (354)
T ss_dssp             HHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHhhccccccccccccccccchhhhhccCceeeccccc--cccccchhhhhhccc-ccceeeccCCCccceeEee
Confidence            9999999999998 58889999999999999999998887764  568899999988775 7899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                      .++++.+.+.++ ++.++|+||+|.++.++....   ......+++++++||||.|+++|+|+||++++.        ++
T Consensus       163 ~~~~~~~~~~~~-~~~~~iidd~~~~f~~~~~~~---~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~~--------~~  230 (354)
T d1fg7a_         163 PQDFRTLLELTR-GKAIVVADEAYIEFCPQASLA---GWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EV  230 (354)
T ss_dssp             HHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSG---GGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HH
T ss_pred             eccccccccccc-ccccccccccchhhccccccc---hhhcccccceEEeCCccccCCCccccccccccc--------hh
Confidence            999999888776 567888899888876543222   223445678999999999999999999999865        68


Q ss_pred             HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769          279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE  358 (419)
Q Consensus       279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~  358 (419)
                      ++.+..... .+..+.+.+.++..++......+.....+++.++++.+.+.+.+++++..+ .|.+|+|+|++++     
T Consensus       231 i~~l~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~-~p~~~~f~~~~~~-----  303 (354)
T d1fg7a_         231 INLLMKVIA-PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFK-----  303 (354)
T ss_dssp             HHHHHHHSC-SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEET-----
T ss_pred             hhhhhhhcC-ccchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCccee-CCCCceEEEEeCC-----
Confidence            888877654 356677777777666665334556677778888999999999988766534 7889999999986     


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCCC-CCCCeEEEEeecCHHHHHHHHHHHH
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIYV-GLKNWLRIAFCAEPSALKDGLGRMK  409 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~~-~~~~~~Ris~~~~~~~l~~~l~~l~  409 (419)
                         ++.+++..| .++||+|.+++.| +.++|+|||+++ +++.+.+++.|+
T Consensus       304 ---~~~~~~~~L-~~~gIlvr~~~~~~~~~~~lRisigt-~ee~~~~l~aLk  350 (354)
T d1fg7a_         304 ---ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVGT-REESQRVIDALR  350 (354)
T ss_dssp             ---THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECCC-HHHHHHHHHHHH
T ss_pred             ---CHHHHHHHH-HHCCcEEecCCCCCCCCCEEEEEeCC-HHHHHHHHHHHh
Confidence               466777776 5679999998876 458999999974 567777777775

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-41  Score=312.35  Aligned_cols=319  Identities=18%  Similarity=0.226  Sum_probs=252.9

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      +..++++|.|+.|.+    .+++++.+.+++.+.+....+..| |..|.++||++|++|+.+.   ++++++|++|+|++
T Consensus        15 ~~~~~d~~~l~~~en----p~~~p~~i~~~~~~~~~~~~~~~y-p~~g~~~Lr~aia~~~~~~---~v~~d~I~it~G~~   86 (334)
T d2f8ja1          15 ETEKRDKTYLALNEN----PFPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKILSYLDTD---FLSKNNVSVGNGAD   86 (334)
T ss_dssp             CCCCCCSEECSSCCC----SSCCCHHHHHHHHHHCCTTGGGSC-CCSSCHHHHHHHHHHHTCS---SCCGGGEEEEEHHH
T ss_pred             cccCCCceEEECCCC----CCCCCHHHHHHHHHHhhcchhcCC-CCCCcHHHHHHHHHHhccc---CCCcceEEecCcch
Confidence            345889999999963    257789999999999877666556 5579999999999999653   36889999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769          118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      ++++.+++.    ||+|++++|+|..+...++..|.+++.++++++..  .+     ....++++++++++|+||||.++
T Consensus        87 ~~l~~l~~~----~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~--~~-----~~~~~~~~~l~l~nP~NPtG~~~  155 (334)
T d2f8ja1          87 EIIYVMMLM----FDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLR--IP-----EVNVGEGDVVFIPNPNNPTGHVF  155 (334)
T ss_dssp             HHHHHHHHH----SSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSC--CC-----CCCCCTTEEEEEESSCTTTCCCC
T ss_pred             hHHHHHhhh----ccccccccccccccccchhccCCcccccccccccc--cc-----ccccccceEEEecccccccceee
Confidence            999887664    59999999999999999999999999999865432  11     12334788999999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      +.+++.++    .++++++|+||+|.++.+....    ......+++++++|+||.++++|+|+||++++.        +
T Consensus       156 s~~~l~~~----~~~~~~ii~Dd~~~~~~~~~~~----~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~--------~  219 (334)
T d2f8ja1         156 EREEIERI----LKTGAFVALDEAYYEFHGESYV----DFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------K  219 (334)
T ss_dssp             CHHHHHHH----HTTTCEEEEECTTGGGTCCCCG----GGGGTCSSEEEEEESTTTSSCTTTCEEEEEECH--------H
T ss_pred             cHHHhhcc----ccceeEEeecccchhhcccccc----cccccCceEEEEecCccccchhhhhhhhcccch--------H
Confidence            96665543    4679999999999876543322    223345689999999999999999999999965        6


Q ss_pred             HHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769          278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL  357 (419)
Q Consensus       278 ~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~  357 (419)
                      +++.++.... .++.+..+|.++..++..  .+++++.++.++++++.+.+.|+++ |+. +.+|+++ |+|+.++..  
T Consensus       220 ~i~~l~~~~~-~~~~s~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~g~-f~~~~~~~~--  291 (334)
T d2f8ja1         220 FIDAYNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDSRGN-FVFVFMEKE--  291 (334)
T ss_dssp             HHHHHHHHSC-TTCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCE-ECCCCSS-EEEEECCHH--
T ss_pred             HHHHHHHhhc-ccccchhhhhhccccccc--ccchhhHHHHHHHHHHHHHHHHHHC-CCe-ECCCCce-EEEEECCCC--
Confidence            8888877654 456788888888888875  6788889999999999999999998 777 4366554 789888752  


Q ss_pred             cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769          358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA  410 (419)
Q Consensus       358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~  410 (419)
                          +..++.+.| .++||.|.++     ++|+|||+++ ++++++++++|++
T Consensus       292 ----~~~~~~~~L-~~~GI~vr~~-----~~~vRis~g~-~ee~~~l~~~l~~  333 (334)
T d2f8ja1         292 ----EKERLLEHL-RTKNVAVRSF-----REGVRITIGK-REENDMILRELEV  333 (334)
T ss_dssp             ----HHHHHHHHH-HHTTEECEEE-----TTEEEEECCC-HHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHH-HHCCCEECCC-----CCeEEEEcCC-HHHHHHHHHHHhc
Confidence                456666666 5679998763     5799999975 5677888888775

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=100.00  E-value=1.3e-38  Score=298.97  Aligned_cols=330  Identities=15%  Similarity=0.128  Sum_probs=245.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHH-HHHHHh-CC-CCCCCCCCC----CCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDA-IVDAVR-SG-KFNCYATNS----GIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a-~~~~~~-~~-~~~~Y~~~~----g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      +..++|++.|+|..+     .|..++. -..++- .+ ....|.-..    -.++|++.|++++....+...+..+|+++
T Consensus        55 ~~~~~~~~~gdp~~~-----~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG  129 (425)
T d2hoxa1          55 QGCSADVASGDGLFL-----EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFG  129 (425)
T ss_dssp             TTCCEECCSCCCGGG-----HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEE
T ss_pred             CCceeeCCCCCCCCC-----CHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEEC
Confidence            556899999998632     2323222 222211 22 122343322    23899999999987766655666789999


Q ss_pred             ccHHHHHHHHHHHh--------cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEE
Q 014769          114 LGCKQAVEVILSVL--------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV  185 (419)
Q Consensus       114 ~g~~~al~~~~~~l--------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  185 (419)
                      +|++++|+.++.+|        ..|||+|+++.|+|+.|...++..+.+..        .|.+|.+.+++++++++++++
T Consensus       130 ~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~--------~~~~D~~~~~~~~~~~~~ii~  201 (425)
T d2hoxa1         130 VGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGY--------VWAGNAANYVNVSNPEQYIEM  201 (425)
T ss_dssp             SHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTE--------EEEEEGGGGTTCSCGGGEEEE
T ss_pred             CCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCC--------ccCCCHHHHHhhCCCCceEEE
Confidence            99999999999999        46899999999999999998888876543        345677888888888899999


Q ss_pred             EeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE
Q 014769          186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV  265 (419)
Q Consensus       186 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  265 (419)
                      +++||||||.+..          +..+++.+|.||+|....|     .++.  ...+++|++.||||.|+++|+|+||++
T Consensus       202 l~sPnNPtG~l~~----------~v~~~~~~I~DEaY~~~~f-----~~~~--~~~~~~Ivl~S~SK~fglaGlRiGw~i  264 (425)
T d2hoxa1         202 VTSPNNPEGLLRH----------AVIKGCKSIYDMVYYWPHY-----TPIK--YKADEDILLFTMSKFTGHSGSRFGWAL  264 (425)
T ss_dssp             EESSCTTTCCCCC----------CSSTTCEEEEECTTCSTTT-----SCCC--SCBCCSEEEEEHHHHTSCGGGCCEEEE
T ss_pred             EECCCCCCcchhh----------hhhhCCEEEEeccccCccc-----cchh--hhcCCeEEEEeCHHhccCcchheeeEE
Confidence            9999999998742          2346899999999975333     2222  223568999999999999999999998


Q ss_pred             eeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccc----------hHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          266 TNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTK----------EDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       266 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                      ++++       .+++++...... +.+++.++|.++..+|+...          .++++..++.++++++.+.+.|.+.+
T Consensus       265 ~~~~-------~i~~~~~~~~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~  337 (425)
T d2hoxa1         265 IKDE-------SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSD  337 (425)
T ss_dssp             ECCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             eCCH-------HHHHHHHHhhccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            8752       466777766533 56789999998888886421          34677778899999999999998764


Q ss_pred             CCCCCCC-------------CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeecCHHH
Q 014769          335 CISCPNK-------------PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCAEPSA  400 (419)
Q Consensus       335 ~~~~~~~-------------p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~~~~~  400 (419)
                      .+.....             +..+.|.|+++..       +..+++.++|+++||.+.||+.|+. ++|+|||+..++++
T Consensus       338 ~~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~-------~~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~~~~e~  410 (425)
T d2hoxa1         338 RFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDD  410 (425)
T ss_dssp             SEECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHH
T ss_pred             CceeeccCCccceeeeeeccCCCcceeeeeCCC-------ChHHHHHHHHHhCCEEEEechhcCCCCCEEEEEecCCHHH
Confidence            3321112             2334467877653       2344566778999999999999986 68999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 014769          401 LKDGLGRMKAFCQR  414 (419)
Q Consensus       401 l~~~l~~l~~~~~~  414 (419)
                      +++++++|++++++
T Consensus       411 ld~~l~rL~~~v~a  424 (425)
T d2hoxa1         411 FDQLMYYLKDMVKA  424 (425)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999998863

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.97  E-value=1.5e-29  Score=234.97  Aligned_cols=333  Identities=14%  Similarity=0.068  Sum_probs=221.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ...++++.....    .++..+...+++    ..    .+++..+.+++++..++.+.     ....+++++++|+++|+
T Consensus        19 ~~~i~~~~gl~~----~~~~~~~~~~~~----~~----~~~~~~~~~~l~~~~~~~~~-----~~~~e~~~~~~~~~~a~   81 (366)
T d2aeua1          19 RDALYDLSGLSG----GFLIDEKDKALL----NT----YIGSSYFAEKVNEYGLKHLG-----GDENDKCVGFNRTSSAI   81 (366)
T ss_dssp             GGGCEECSSCCC----CCCCCHHHHHHH----TS----TTHHHHHHHHHHHHHHHHHT-----CCTTEEEEEESSHHHHH
T ss_pred             cchHhhhccCCC----CCCccHHHHHHH----HH----hcCchhhHHHHHHHHHHHcc-----CCCccEEEEeCCHHHHH
Confidence            345677764432    345555554443    21    23343455788888888773     23457899999999999


Q ss_pred             HHHHHHhcCCCCeEEee-CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          121 EVILSVLARPGANVLLP-RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~-~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                      ..++.++..+++.|+++ .|+|..+...++..|++++  +.       -|+++++.+++++++++++++|+||+  +++.
T Consensus        82 ~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v--~~-------~d~e~l~~~i~~~tk~i~~~~p~n~~--~~~~  150 (366)
T d2aeua1          82 LATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYF--ES-------DKVGEILNKIDKDTLVIITGSTMDLK--VIEL  150 (366)
T ss_dssp             HHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEE--EE-------SCHHHHHTTCCTTEEEEEECBCTTSC--BCCH
T ss_pred             HHHHHHhCCCCEEEEecCCCcchhHHHHHHhcCCeEE--CC-------CCHHHHHHhcCCCceEEEEEecCCCC--cCCH
Confidence            99999987544444554 5899999999999998753  22       17899999999999999999999985  4677


Q ss_pred             HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769          200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII  279 (419)
Q Consensus       200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  279 (419)
                      +++++|+++|+++|+++++||+|+...+.....+.....+.   .+++.|+||.  ++|+|+||++++.        +++
T Consensus       151 ~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~---di~~~S~sK~--~~g~~~G~i~~~~--------~~i  217 (366)
T d2aeua1         151 ENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGA---DLVVTSTDKL--MEGPRGGLLAGKK--------ELV  217 (366)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTC---SEEEEETTSS--SSSCSCEEEEEEH--------HHH
T ss_pred             HHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcCc---eEEEeccccc--ccccceeEEEecH--------HHH
Confidence            88999999999999999999999977665333322223333   3888899997  5689999999986        688


Q ss_pred             HHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH----HHHHHHHHhhcCCCCCC-CCCCCceEEEEeecC
Q 014769          280 DSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE----SAEICYDGVKEIPCISC-PNKPEGSMVTMVKLN  353 (419)
Q Consensus       280 ~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~  353 (419)
                      +.++... .+.++++++.|.++...|+......+++..+..++    ..+.+......++++.. ...+.++.+++....
T Consensus       218 ~~~~~~~~~~g~~~~~~~~~a~~~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (366)
T d2aeua1         218 DKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVY  297 (366)
T ss_dssp             HHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEE
T ss_pred             HHHHHHHhcccccCCHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCC
Confidence            8888765 34566778888888887765332222222222222    22333333333333220 113345666666543


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeecCCCC-CCCCeEEEEeec-CHH--HHHHHHHHHHHHHHH
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTPGIYV-GLKNWLRIAFCA-EPS--ALKDGLGRMKAFCQR  414 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-~~~~~~Ris~~~-~~~--~l~~~l~~l~~~~~~  414 (419)
                      ........++.+++.+|++++||.+.||..| +..+++||+++. +.+  +.+.+++.|.+.++.
T Consensus       298 ~~~~~~~~~~~~~a~~Ll~~~gV~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK~  362 (366)
T d2aeua1         298 KDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKM  362 (366)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHH
T ss_pred             cceeecccCHHHHHHHHHHhCCEEEEECCCCCCCCCEEEEeccccchhhCCHHHHHHHHHHHHHH
Confidence            3211111235678899999999999999887 446899999964 222  234455555555543

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5.8e-27  Score=219.96  Aligned_cols=328  Identities=14%  Similarity=0.146  Sum_probs=221.4

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCC--C----------CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHH
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNS--G----------IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILS  125 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~--g----------~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~  125 (419)
                      .|+++.++++|.+.+....  .|+++.  .          +.++|+.+|+++      ++++++|++|+|+|++++.++.
T Consensus        12 ~p~~~~v~ea~~~~~~~~~--~~~np~~~~~~~~~~~~~~~~~~R~~iA~~l------g~~~~~I~~~~~~t~~l~~~~~   83 (391)
T d1p3wa_          12 TPVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPREIVFTSGATESDNLAIK   83 (391)
T ss_dssp             CCCCHHHHHHHHTTTSTTS--CCCCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESSHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHhcc--ccCCCchhhhHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEEECCHHHHHHHHHh
Confidence            4678999999988876432  343321  1          236788999998      7889999999999999999988


Q ss_pred             Hhc----CCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769          126 VLA----RPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       126 ~l~----~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  198 (419)
                      ++.    ++||.|++.++.|+++...   ++..|+++..++.+.  .+.+|++.++++++++|++|++++|+||||.++|
T Consensus        84 ~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~~  161 (391)
T d1p3wa_          84 GAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD  161 (391)
T ss_dssp             HHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBCC
T ss_pred             hhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCC--CCeEcHHHHHHhCCCCcEEEEEECCCCCCeeECC
Confidence            754    6999999999999876443   445699999998753  4568999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                         +++|.++|+++|+++++|.+|+...    .+..+..++.+   +++.|.+|++|.+|  +|+++++........+..
T Consensus       162 ---~~~I~~~~~~~~~~~ivD~~~~~g~----~~~d~~~~~~D---~~~~s~~k~~g~~g--~g~~~~~~~~~~~~~~~~  229 (391)
T d1p3wa_         162 ---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLSQLKVD---LMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQM  229 (391)
T ss_dssp             ---HHHHHHHHHHHTCEEEEECTTTBTT----BCCCTTTSCCS---EEEEESTTTTSCSS--CEEEEECBTTBCCCCCSS
T ss_pred             ---HHHHHHHhccCCcEEEEeeccccCC----ccccchhcccc---ccccccccccCCCc--eEEEEEecchhcccCCcc
Confidence               8899999999999999999998633    22333344433   77789999977666  677777653211100000


Q ss_pred             HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC--CCCceEEEEeecCccc
Q 014769          279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN--KPEGSMVTMVKLNPWL  356 (419)
Q Consensus       279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~p~~g~~~~~~~~~~~  356 (419)
                      ...........++.+.....++...+... .+......+++++....+.+.|..+++.....  .......+.+.++.  
T Consensus       230 ~gg~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--  306 (391)
T d1p3wa_         230 HGGGHERGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNY--  306 (391)
T ss_dssp             CSSCTTTTTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETT--
T ss_pred             cCCccccCcccCcchhhhhhhhhhhhhHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEEEEeCC--
Confidence            00000000112334444444444444432 23445556677888888888888765432111  11122233333432  


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                          .+..++...+   +++.+..|..+..                   .+++|+|++  ++++|++.+++.|+++++++
T Consensus       307 ----~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~l  379 (391)
T d1p3wa_         307 ----VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRL  379 (391)
T ss_dssp             ----SCHHHHHHHT---TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ----CChHHHHHHh---CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence                2455565544   4677766654321                   257999996  48999999999999999987


Q ss_pred             hc
Q 014769          416 TK  417 (419)
Q Consensus       416 ~~  417 (419)
                      ++
T Consensus       380 r~  381 (391)
T d1p3wa_         380 RD  381 (391)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.96  E-value=7.3e-28  Score=224.01  Aligned_cols=296  Identities=13%  Similarity=0.134  Sum_probs=195.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW  166 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  166 (419)
                      ..+++.+|+++        +.+++++|+|+++|+..++.++++|||.|+++.++|++....++..|.+++.++++...++
T Consensus        50 ~~~~~~~A~~~--------g~e~~~~t~g~t~a~~~~~~al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~  121 (364)
T d2e7ja1          50 DFIHNQLPKFL--------GCDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDY  121 (364)
T ss_dssp             HHHHTHHHHHT--------TSSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTC
T ss_pred             HHHHHHHHHHh--------CcCEEEEECcHHHHHHHHHHHHhCCCcEEEeecccccccchHHHhccceEEEeeecccccc
Confidence            55788888887        3478999999999999999999999999999999999888888999999999998776778


Q ss_pred             ccChHHHHHhhcCC-----ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769          167 EVDLDAVEALADKN-----TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI  241 (419)
Q Consensus       167 ~~~~~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  241 (419)
                      .+|++.+++++++.     +++|++++|+||||.+.|   +++|+++|+++|+++++|++|+...+    ...+..++.+
T Consensus       122 ~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~I~~ia~~~~i~livD~a~~~g~~----~~~~~~~g~D  194 (364)
T d2e7ja1         122 AITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRM----PVSLKEIGAD  194 (364)
T ss_dssp             CCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTB----CCCHHHHTCS
T ss_pred             ccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chhheeccccccchhhccccchhhhh----hhcccccccc
Confidence            89999999988543     357888999999999999   88999999999999999999986332    2233333333


Q ss_pred             CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh--------cc-ccCCchHHHHHHHHHHcccchHHH
Q 014769          242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL--------SI-YSDIPTFIQGAIPQILEKTKEDFF  312 (419)
Q Consensus       242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~--------~~-~~~~~~~~~~a~~~~l~~~~~~~~  312 (419)
                         ++++|+||.++.+| ++||++++++        +++.+....        .. ..........++...++.. .+.+
T Consensus       195 ---~~~~S~~K~~~~~g-~~g~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~  261 (364)
T d2e7ja1         195 ---FIVGSGHKSMAASG-PIGVMGMKEE--------WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHV-RERI  261 (364)
T ss_dssp             ---EEEEEHHHHSSCCS-SCEEEEECTT--------TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHH-HHHG
T ss_pred             ---eeeeccccccCCCC-CEEEEEECHH--------HHHHHHhhccccCcccccccccccchhHHHHHHHHHHHH-HHHH
Confidence               78889999987766 7999998763        222221110        00 1112222223333333221 1222


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCccc--ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCe
Q 014769          313 CKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWL--LEDINDDIEFALKLAKEESVIVTPGIYVGLKNW  389 (419)
Q Consensus       313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~  389 (419)
                      +...+. .++.+.+.+.|.++ ++.+. ..|......++..+...  .........+....+...++..   ...+....
T Consensus       262 ~~~~~~-~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~g~~~~  336 (364)
T d2e7ja1         262 KRWDEE-VEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHG---IKPGLTRY  336 (364)
T ss_dssp             GGHHHH-HHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHHHHHTTEEC---SCTTCCSE
T ss_pred             HHHHHH-HHHHHHHHHHHHHc-CCeecCCCCCCcceEEEeccchHHHHHHhhccchHHHHHHHhcCCce---ecCCCcce
Confidence            222222 23455666667665 43321 12333323333332110  0000112223344456667653   22344567


Q ss_pred             EEEEe-ecCHHHHHHHHHHHHHHHHHH
Q 014769          390 LRIAF-CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       390 ~Ris~-~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +|++. +.+++++++++++|++++++|
T Consensus       337 ~~~~~~~~t~edid~~~~~l~ei~~~y  363 (364)
T d2e7ja1         337 FKLSTYGLSDEEVDYVLNAFKEIIEKY  363 (364)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            88876 678999999999999999886

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.95  E-value=5.5e-27  Score=219.40  Aligned_cols=326  Identities=16%  Similarity=0.169  Sum_probs=220.3

Q ss_pred             eeccCCCCCCCCCCCChHHHHHHHHHHHhC----CCCCCCCCC----CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----GKFNCYATN----SGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~----~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      +-|..+..     .+.|+.+++++.+.++.    +.. .+...    .-+.++|+.+++++      ++++++|++|+|+
T Consensus         9 ~yld~~~~-----~~~p~~v~ea~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~------~~~~~~i~~~~g~   76 (381)
T d1elua_           9 TYFNFGGQ-----GILPTVALEAITAMYGYLQENGPF-SIAANQHIQQLIAQLRQALAETF------NVDPNTITITDNV   76 (381)
T ss_dssp             EECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSS-SHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEESSH
T ss_pred             EEeeCCcc-----cCCCHHHHHHHHHHHHHhhcCCCc-cchhhHHHHHHHHHHHHHHHHHh------CCCcccEEEECCh
Confidence            45666542     24567778888776642    211 11111    12346788888888      6788999999999


Q ss_pred             HHHHHHHHHHh-cCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCC
Q 014769          117 KQAVEVILSVL-ARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGN  191 (419)
Q Consensus       117 ~~al~~~~~~l-~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~n  191 (419)
                      |++++.++.++ .++||+|+++++.|++..    ...+..|+.+..++.+.........+.++++++++++++++++++|
T Consensus        77 t~a~~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n  156 (381)
T d1elua_          77 TTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLW  156 (381)
T ss_dssp             HHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCT
T ss_pred             HHHhhhcchhhhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhcccccccccccccc
Confidence            99999999998 578999999999997643    3455679999998875443333335677788888999999999999


Q ss_pred             ccccCCCHHHHHHHHHHHHhC----CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          192 PCGNVFTYHHLQEIAEMARKL----RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~----~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      |||.++|   +++|.++|+++    ++++++|.+++..    ..+..+..++.   .+++.|++|+++.| .++|++.++
T Consensus       157 ~tG~~~~---~~~I~~l~~~~~~~~~~~~~vD~~~~~g----~~~~~~~~~~~---D~~~~s~~K~~~~p-~G~g~l~~~  225 (381)
T d1elua_         157 NTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAG----SLPLDFSRLEV---DYYAFTGHKWFAGP-AGVGGLYIH  225 (381)
T ss_dssp             TTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBT----TBCCCTTTSCC---SEEEEESSSTTCCC-TTCEEEEEC
T ss_pred             cccccch---hhHHHHHHhhcccccccccccccccccc----ccccccccccc---cccccccccccccc-chhhHHHhh
Confidence            9999999   77788888774    6899999999863    23333444433   38888999996443 457888876


Q ss_pred             CCCCccchhhHHHHHHh-----------------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHH
Q 014769          268 DPNGIFQKSGIIDSIKD-----------------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESA  323 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~-----------------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~  323 (419)
                      +.        ..+.+..                       .....++++.....++.++++..... ..+...++.++++
T Consensus       226 ~~--------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~  297 (381)
T d1elua_         226 GD--------CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRS  297 (381)
T ss_dssp             TT--------TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred             HH--------HHHhcCcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHH
Confidence            52        1111110                       00012345555555655555542222 2344557788888


Q ss_pred             HHHHHHhhcCCCCCCCC--CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHH
Q 014769          324 EICYDGVKEIPCISCPN--KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPS  399 (419)
Q Consensus       324 ~~l~~~l~~~~~~~~~~--~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~  399 (419)
                      +++.+.|+++|++.++.  .|.++ ++.+.++..     .+..++. +.|+++||.+..   ++.++++|+|++  ++++
T Consensus       298 ~~l~~~L~~~~~~~~~~~~~~~~~-~vsf~~~~~-----~~~~~i~-~~L~~~gi~v~~---~~~~~~lRis~~~~nt~e  367 (381)
T d1elua_         298 EFLWRGLNQLPHVHCLATSAPQAG-LVSFTVDSP-----LGHRAIV-QKLEEQRIYLRT---IADPDCIRACCHYITDEE  367 (381)
T ss_dssp             HHHHHHHHHSTTEEESCSSCCSSS-EEEEEECSS-----SCHHHHH-HHHHHTTEECEE---ETTTTEEEEECCTTCCHH
T ss_pred             HHHHHHHhcCCCeEecCCCCcccc-EEEEEcCCC-----CCHHHHH-HHHHhCCcEEEe---cCCCCEEEEecCCCCCHH
Confidence            99999999988876442  24455 444555431     2344554 455889998864   334789999995  5889


Q ss_pred             HHHHHHHHHHHH
Q 014769          400 ALKDGLGRMKAF  411 (419)
Q Consensus       400 ~l~~~l~~l~~~  411 (419)
                      ||+++++.|+++
T Consensus       368 did~ll~~l~e~  379 (381)
T d1elua_         368 EINHLLARLADF  379 (381)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhh
Confidence            999999998764

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.95  E-value=5.6e-26  Score=209.92  Aligned_cols=332  Identities=16%  Similarity=0.120  Sum_probs=235.6

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      +.+++||+..+   +..+..+|.++++..++++....      .-++...-..+|++.+|+|+        ..+..++.+
T Consensus        44 ~~~~~~FsSnd---YLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~--------g~e~all~~  112 (396)
T d2bwna1          44 KQDITVWCGND---YLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH--------QKEAALVFS  112 (396)
T ss_dssp             EEEEEECSCSC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT--------TCSEEEEES
T ss_pred             CeEEEEEEccc---ccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHh--------CCCceeeee
Confidence            46789999998   45677889999999998874211      11222223467888888887        346788888


Q ss_pred             cHHHHHHHHHHHh--cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh---cCC-ccEEEEeC
Q 014769          115 GCKQAVEVILSVL--ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA---DKN-TAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l--~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~---~~~-~~~v~i~~  188 (419)
                      ++..++..++.++  ..++|.|+...-.|.+....++..+.++..+++.       |.+.+++.+   .+. ++.|++..
T Consensus       113 sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-------d~~~l~~l~~~~~~~~~~~iv~eg  185 (396)
T d2bwna1         113 SAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  185 (396)
T ss_dssp             CHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cchHHHHHHHHHHhcccCCCceeehhhhhhccchhhhccccCceEeecc-------hHHHhhhHHhhhcccCceeEEEEe
Confidence            8999999989887  4688999999999988889999999988877642       445554443   333 34555566


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      ..+.+|.+.|   +++|+++|++||+++++||+|+...++..+......++. ....++++||||++|..|   |+++++
T Consensus       186 vySmdGd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~  259 (396)
T d2bwna1         186 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  259 (396)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             eccCcccccc---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchh
Confidence            6888999999   999999999999999999999998887544332222221 223588999999999888   998886


Q ss_pred             CCCCccchhhHHHHHHhhh-c--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769          268 DPNGIFQKSGIIDSIKDCL-S--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG  344 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  344 (419)
                      .        ++++.++... .  ++...+++...++.+.++-...+..++.+..++.+.+.+++.+..+ ++. + .+..
T Consensus       260 ~--------~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~-~~~~  328 (396)
T d2bwna1         260 A--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-I-IDHG  328 (396)
T ss_dssp             H--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCS
T ss_pred             H--------HHHHHHHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc-CCC-c-CCCC
Confidence            5        6888887663 2  2333344444444444443333445666778888888898888876 665 3 2333


Q ss_pred             eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      +..+.+.+.+.     ....++..+||+++||.+.+..++..   ...+|+++.  .++++|+++++.|++++
T Consensus       329 spIvpv~ig~~-----~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~iw  396 (396)
T d2bwna1         329 SHIVPVVIGDP-----VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW  396 (396)
T ss_dssp             SSCEEEECCCH-----HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHhC
Confidence            33433444321     12456777888889999988777654   356999993  68999999999999864

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.6e-25  Score=210.54  Aligned_cols=335  Identities=13%  Similarity=0.128  Sum_probs=237.0

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--C------CCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--N------SGIPPARRAIADYLSRDLPYKLSADDVYV  112 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~  112 (419)
                      +.+++-|..+..     .+.++.+.+++.+.+.+...+....  .      .-+.+.|+.++++++     ...+++|++
T Consensus        20 ~~~~iYld~a~~-----~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~-----~~~~~~i~~   89 (405)
T d1jf9a_          20 GLPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN-----ARSAEELVF   89 (405)
T ss_dssp             TEECEECCTTTC-----CCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT-----CSCGGGEEE
T ss_pred             CCCeEEEeCccc-----cCCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcC-----CCCcccccc
Confidence            445566766642     3678899999988876532111100  0      124567788888872     134589999


Q ss_pred             cccHHHHHHHHHHHh----cCCCCeEEeeCCCCCCc----HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769          113 TLGCKQAVEVILSVL----ARPGANVLLPRPGWPYY----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM  184 (419)
Q Consensus       113 t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  184 (419)
                      ++|+|++++.++.++    ..+||.|++.+..|++.    ...++..|++++.++++++  ..++++.++.+++++++++
T Consensus        90 ~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~--g~~~~~~~~~~i~~~t~lv  167 (405)
T d1jf9a_          90 VRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPTLFDEKTRLL  167 (405)
T ss_dssp             ESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT--SCBCGGGHHHHCCTTEEEE
T ss_pred             cCcHHHHHHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCC--CcCCHHHHHHhccCCcEEE
Confidence            999999999888763    46899999999999874    3445677999999998653  4689999999999999999


Q ss_pred             EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769          185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL  264 (419)
Q Consensus       185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  264 (419)
                      ++++.+|.||.++|   +++|.++|+++|+++++|.+++.    |..+..+..++.+   +++.|++|++|.+|  +|++
T Consensus       168 ~~~~v~~~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~----g~~~id~~~~~~D---~~~~s~hK~~Gp~G--~g~l  235 (405)
T d1jf9a_         168 AITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAV----MHHPVDVQALDCD---FYVFSGHKLYGPTG--IGIL  235 (405)
T ss_dssp             EEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EEEEEGGGTTSCSS--CEEE
T ss_pred             EEecCCCcccccCc---hHHhhhHHHHcCCeeecccceec----cccccchhhcCCc---eeeccccccccCCC--ceee
Confidence            99999999999999   99999999999999999999987    3333344455554   88889999976666  7888


Q ss_pred             EeeCCCCccchhhHHHHHHhh-----------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          265 VTNDPNGIFQKSGIIDSIKDC-----------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       265 ~~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                      ++++        +..+.+...                       ....++++..+..++..+++.......+...++...
T Consensus       236 ~v~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  307 (405)
T d1jf9a_         236 YVKE--------ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQN  307 (405)
T ss_dssp             EECH--------HHHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             eech--------hhhcccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence            8764        222221100                       001246677777777777765333445666667777


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCCeEEEE
Q 014769          322 SAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKNWLRIA  393 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~~Ris  393 (419)
                      ..+.+.+.++.++......+...+..+.+.++.      .+..++... |.++||.++.|+.+        +.++++|+|
T Consensus       308 L~~~~~~~l~~~~~~~~~~~~~r~~ivsf~~~~------~~~~~~~~~-L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS  380 (405)
T d1jf9a_         308 LMHYALSQLESVPDLTLYGPQNRLGVIAFNLGK------HHAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMCRAS  380 (405)
T ss_dssp             HHHHHHHHHTTSTTEEEESCTTCCSEEEEEETT------CCHHHHHHH-HHHTTEECEEECTTCHHHHHHTTCSCEEEEE
T ss_pred             HHHHHHhhhhcCCcccccCCcCcCcEEEEEcCC------CCHHHHHHH-HHHCCcEEEccchhhhhHHHhcCCCCEEEEE
Confidence            778888888877554422122222244455653      245565554 47899999988765        336889999


Q ss_pred             ee--cCHHHHHHHHHHHHHHHHH
Q 014769          394 FC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       394 ~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                      ++  .+++||+.+++.|+++.+-
T Consensus       381 ~~~ynt~eDid~l~~~l~~i~r~  403 (405)
T d1jf9a_         381 LAMYNTHEEVDRLVTGLQRIHRL  403 (405)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHh
Confidence            95  5889999999999988764

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.1e-25  Score=209.23  Aligned_cols=329  Identities=13%  Similarity=0.105  Sum_probs=235.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL  114 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~  114 (419)
                      |++++||+..+   +..+..+|.++++..+++++...      ..++...-+.+|++.+|+|+        ..+..++++
T Consensus        37 g~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~--------g~e~al~~~  105 (383)
T d1bs0a_          37 DRQYLNFSSND---YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL--------GYSRALLFI  105 (383)
T ss_dssp             TEEEEECSCCC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH--------TCSEEEEES
T ss_pred             CeEEEEEEccc---ccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhc--------CCCceEEec
Confidence            67789999887   34566789999999999874211      12223334478899999988        356889999


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---CCccEEEEeCCCC
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---KNTAAMVIINPGN  191 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~n  191 (419)
                      ++..++..++.++..++|.|++....|..+...++..+.+++.++.       .|.+.+++.+.   ++.++|++..+.+
T Consensus       106 SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~h-------nd~~~le~~l~~~~~~~~~vv~e~v~s  178 (383)
T d1bs0a_         106 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS  178 (383)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             ccchhhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEecc-------hHHHHHHHHhcccCCCceEEEecCCCC
Confidence            9999999999999999999999999999888888888888887764       26677766653   3456777778899


Q ss_pred             ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769          192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG  271 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  271 (419)
                      ++|.+.|   +++|.++|++||+++++||+|+.+.++.........++. ...+++.|++|.++.+|   |++.++.   
T Consensus       179 ~~G~i~p---l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~-~~~~~~~t~~ka~g~~G---g~v~~~~---  248 (383)
T d1bs0a_         179 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSS---  248 (383)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECH---
T ss_pred             CCCcccc---hhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCC-ccccccccccccccccc---cccccch---
Confidence            9999999   888899999999999999999998776543322222222 33466779999998887   8888865   


Q ss_pred             ccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769          272 IFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT  348 (419)
Q Consensus       272 ~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  348 (419)
                           +.++.++...   .++...+++...++.+.++.......+..+.++.++..++.+.|.++ ++. + .+..+.++
T Consensus       249 -----~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~-~-~~~~s~Ii  320 (383)
T d1bs0a_         249 -----TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSAIQ  320 (383)
T ss_dssp             -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSSBC
T ss_pred             -----hHHHHHHhhchhhhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc-CCc-c-CCCCCCEE
Confidence                 5777777553   12333344444444445443223455667788889999999999887 554 2 22323232


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~  411 (419)
                      .+.+.+.     ....++.++| .++||++.+..++..   ...+|+++.  .++|+|+++++.|..+
T Consensus       321 ~v~~g~~-----~~a~~~~~~L-~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         321 PLIVGDN-----SRALQLAEKL-RQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             CEEEESH-----HHHHHHHHHH-HHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEECCH-----HHHHHHHHHH-HHCCceEEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence            2333211     1244666666 567999988766543   346999994  6899999999998754

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=4.2e-25  Score=206.24  Aligned_cols=334  Identities=14%  Similarity=0.135  Sum_probs=231.7

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC------CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY------ATNSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      +|+.+|||+..+   +..+..+|.+++++.++++.......      +...-..++++.+++++        ..+.++++
T Consensus        43 dG~~~l~f~s~d---YLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~--------g~e~al~~  111 (401)
T d1fc4a_          43 DGSHVINFCANN---YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL--------GMEDAILY  111 (401)
T ss_dssp             TSCEEEECCCSC---TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH--------TCSEEEEE
T ss_pred             CCCEEEEEEccc---cccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhh--------cCCceEEe
Confidence            478899998876   34456789999999998865322111      12233458899999988        35789999


Q ss_pred             ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh---hcC---CccEEEEe
Q 014769          114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL---ADK---NTAAMVII  187 (419)
Q Consensus       114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~---~~~---~~~~v~i~  187 (419)
                      ++++.++..++.+++.++|.|++....|.++...+...+.++..++.       .|.+.++..   .+.   ...++++.
T Consensus       112 ~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~-------~d~~~le~~~~~~~~~~~~~~liv~e  184 (401)
T d1fc4a_         112 SSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             cchhhhhHHHHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcC-------CChHHHHHHHHHhhhcccCceEEEEc
Confidence            99999999999999999999999999999988888888888777653       244444443   322   22344444


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEe
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVT  266 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~  266 (419)
                      ...+..|...+   ++++.++|+++|+++|+||+|+.+.++..+......++. .+..++++|++|.++  |...|++.+
T Consensus       185 gv~s~~G~~~~---L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~g--g~~Gg~v~g  259 (401)
T d1fc4a_         185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTAA  259 (401)
T ss_dssp             SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEEE
T ss_pred             CCCCCCCchhh---hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccc--cCCcccccC
Confidence            55667888888   999999999999999999999998887543322222221 123478999999964  334588887


Q ss_pred             eCCCCccchhhHHHHHHhhh-c--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769          267 NDPNGIFQKSGIIDSIKDCL-S--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE  343 (419)
Q Consensus       267 ~~~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  343 (419)
                      +.        ++++.++... .  .+...++....++...++.  .....+.+++++++.+.+++.+... ++... ...
T Consensus       260 ~~--------~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~--~~~~~~~~~~l~~~~~~~~~~l~~~-g~~~~-~~~  327 (401)
T d1fc4a_         260 RK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEM--VEAGSELRDRLWANARQFREQMSAA-GFTLA-GAD  327 (401)
T ss_dssp             CH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSS
T ss_pred             CH--------HHHHHHHcCChhhhhcCCCCHHHHHHHHhhhcc--cccCHHHHHHHHHHHHHHHhhhccc-CCccC-CCC
Confidence            65        6777776553 2  2344455555555555553  2234566788899999999998876 55522 333


Q ss_pred             ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .. .+.+.+.+.     ....++..+| .++||++.+-.++..   ...+|+++.  .++|+|+++++.|+++.+++
T Consensus       328 ~p-Iv~v~~~~~-----~~a~~~~~~L-~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~l  397 (401)
T d1fc4a_         328 HA-IIPVMLGDA-----VVAQKFAREL-QKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             SS-EEEEEEECH-----HHHHHHHHHH-HHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CC-EEEEEECCH-----HHHHHHHHHH-HHCCceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            33 333334321     1234666666 567999987655443   345999994  69999999999999998875

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.93  E-value=5.4e-24  Score=200.24  Aligned_cols=335  Identities=12%  Similarity=0.129  Sum_probs=238.8

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--C------CCCHHHHHHHHHHHHhhCCCCCC-CCcEE
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--N------SGIPPARRAIADYLSRDLPYKLS-ADDVY  111 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~------~g~~~lr~~ia~~l~~~~~~~~~-~~~i~  111 (419)
                      ++++|=|..+.-     .++++.+++++.+.+.+...+....  .      .-+.+.|+.+++++      +++ ++.++
T Consensus        20 ~~~~iYld~a~~-----~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~ll------ga~~~~~i~   88 (408)
T d1t3ia_          20 GHPLVYLDNAAT-----SQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI------NARSPREIV   88 (408)
T ss_dssp             TEECEECBTTTC-----CCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGEE
T ss_pred             CCCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCcccEE
Confidence            456777877753     3578899999988876432110110  0      12235788888887      565 57899


Q ss_pred             EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      ++++++++++.++..+    .++||+|++.+-.|++..    ..++..|..+..++.+.  ....+.+.++.++++++++
T Consensus        89 ~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~l~~~~~~~t~l  166 (408)
T d1t3ia_          89 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSEKTKL  166 (408)
T ss_dssp             EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCTTEEE
T ss_pred             eecchHHHHHHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccc--cccccHHHhhhccCCCceE
Confidence            9999999999988763    458999999999998653    34456689998888654  3457899999999999999


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW  263 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  263 (419)
                      |.+++.+|-||..+|   +++|.++|+++|+++++|.+++.    |..+..+..++.+   +++.|.+|+++.+|  +|+
T Consensus       167 v~i~~~~~~tG~~~p---~~~i~~~~~~~g~~~ivDa~q~~----g~~~id~~~~~~D---~~~~s~hK~~gp~G--~g~  234 (408)
T d1t3ia_         167 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSA----PHYPLDVQLIDCD---WLVASGHKMCAPTG--IGF  234 (408)
T ss_dssp             EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EEEEEGGGTTSCTT--CEE
T ss_pred             EEEecccccccccCc---HHHHhhhhhccCceeeeccceec----ccccccccccCCc---eEEeccccccCCCC--ccc
Confidence            999999999999999   88899999999999999999987    3334445455554   88889999865555  788


Q ss_pred             EEeeCCCCccchhhHHHHHHhh----------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769          264 LVTNDPNGIFQKSGIIDSIKDC----------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE  321 (419)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  321 (419)
                      ++.++        +....+...                      .-..++++.+...++..+++.......++...+...
T Consensus       235 l~v~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  306 (408)
T d1t3ia_         235 LYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE  306 (408)
T ss_dssp             EEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             cccch--------hhhhcCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            88765        333322210                      001346677777777777765433456667777788


Q ss_pred             HHHHHHHHhhcCCCCCCCCC----CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCe
Q 014769          322 SAEICYDGVKEIPCISCPNK----PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNW  389 (419)
Q Consensus       322 ~~~~l~~~l~~~~~~~~~~~----p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~  389 (419)
                      +.+++.+.+.+.++...+..    ...+..+.+.++.      .+..++...| .++||.+..|..+.        .+++
T Consensus       307 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~------~~~~~v~~~L-~~~gI~v~~G~~c~~~~~~~~~~~g~  379 (408)
T d1t3ia_         307 LTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG------LHASDVATMV-DQDGIAIRSGHHCTQPLHRLFDASGS  379 (408)
T ss_dssp             HHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT------BCHHHHHHHH-HTTTEECBCSCTTCHHHHHHTTCCCC
T ss_pred             HHhHHhhhhccCccccccCCCccccCcceEEEEEeCC------CCHHHHHHHH-hhCCcEEecCcccccHHHHhhcCCcc
Confidence            88888888888766553321    1123344445553      2456666555 78899999887653        3678


Q ss_pred             EEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          390 LRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       390 ~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +|+|++  .+++||+.+++.|+++++.+
T Consensus       380 vRiS~~~ynt~~did~li~~L~~~~~~f  407 (408)
T d1t3ia_         380 ARASLYFYNTKEEIDLFLQSLQATIRFF  407 (408)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            999995  58999999999999998864

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=7.9e-26  Score=207.76  Aligned_cols=329  Identities=13%  Similarity=0.108  Sum_probs=208.6

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI  123 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~  123 (419)
                      +|||..-+.+     .++|++++|+.++.. + ...|++.+...+|++.+|+++      +  .+++++++||++|+..+
T Consensus         1 ~~~~~~~~~t-----~p~p~v~~A~~~a~~-g-~~~yg~~p~~~~le~~lA~~~------G--~~~~~~~~sGt~A~~~a   65 (343)
T d1m6sa_           1 MIDLRSDTVT-----KPTEEMRKAMAQAEV-G-DDVYGEDPTINELERLAAETF------G--KEAALFVPSGTMGNQVS   65 (343)
T ss_dssp             CEECSCGGGC-----CCCHHHHHHHHTCCC-C-CGGGTCCHHHHHHHHHHHHHT------T--CSEEEEESCHHHHHHHH
T ss_pred             CcccccccCC-----CCCHHHHHHHHhhhc-C-CcccCCCHHHHHHHHHHHHHH------C--CCeEEEeCCHHHHHHHH
Confidence            4777655432     236789999876542 2 235777667889999999987      2  35789999999999999


Q ss_pred             HHHhcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC------ccEE-EEeCCCCcc
Q 014769          124 LSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------TAAM-VIINPGNPC  193 (419)
Q Consensus       124 ~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v-~i~~p~npt  193 (419)
                      +.++..+||.+++..+.+..+..   .....+..+..++.   .....+++.++..+...      +..+ +.+.++|++
T Consensus        66 l~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  142 (343)
T d1m6sa_          66 IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPG---KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSG  142 (343)
T ss_dssp             HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECE---ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTT
T ss_pred             HHHHhccCCceeccccccceeeecccccccccceeecccc---ccCccCHHHHHHhhhhhhcccccccccccccccccCC
Confidence            99999999999999998864432   33333444444432   23356888888877642      2333 444567899


Q ss_pred             ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769          194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF  273 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  273 (419)
                      |.+.+.+++.+|.++|+++++++++|+++..+.......... ..... ....+.+.+|  +..|...|+++...     
T Consensus       143 ~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~--~~~g~~~~~~~~~~-----  213 (343)
T d1m6sa_         143 GRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVK-EYAGY-ADSVMFCLSK--GLCAPVGSVVVGDR-----  213 (343)
T ss_dssp             SBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHH-HHHHT-CSEEEEESSS--TTCCSSCEEEEECH-----
T ss_pred             ceecCHHHHHHHHHHHHhcCeEEEeccccccccccccccchh-hhccc-cccccccccc--cccccccccccccH-----
Confidence            999999999999999999999999999998755432111111 11111 1233333333  45566677777644     


Q ss_pred             chhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeec
Q 014769          274 QKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL  352 (419)
Q Consensus       274 ~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~  352 (419)
                         +.+........ ...+.+.....++......   ....+......++...+.+.+.++.+.. ...|..++++++.+
T Consensus       214 ---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~  286 (343)
T d1m6sa_         214 ---DFIERARKARKMLGGGMRQAGVLAAAGIIAL---TKMVDRLKEDHENARFLALKLKEIGYSV-NPEDVKTNMVILRT  286 (343)
T ss_dssp             ---HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHH---HHSSTTHHHHHHHHHHHHHHHHHHTCBC-CGGGCCSSEEEEEC
T ss_pred             ---HHHhhhHhhCcccccccchhHHHHHhhhhhh---hhhHHHHHHHHHHHHHhhhHHHHhccCc-cCCCCCceEEEEEe
Confidence               44444444432 1222222222222222111   1111112233344444445554443443 33566677889888


Q ss_pred             CcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          353 NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       353 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      +...    .+..++..+| .++||.+.|..    ++++|++++  .++|+|+++++.|+++++++
T Consensus       287 ~~~~----~~a~~l~~~L-~~~Gi~v~~~~----~~~iRi~~~~~~t~edid~~v~~l~~v~~~~  342 (343)
T d1m6sa_         287 DNLK----VNAHGFIEAL-RNSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  342 (343)
T ss_dssp             TTSS----SCHHHHHHHH-HHHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCc----ccHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            6432    2467787776 56799998753    578999984  68999999999999999987

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-23  Score=196.30  Aligned_cols=332  Identities=16%  Similarity=0.106  Sum_probs=223.5

Q ss_pred             eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHHHH
Q 014769           45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVE  121 (419)
Q Consensus        45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~al~  121 (419)
                      +-|+-| |     .+.++.|+++|..    ...+..++  ...+.+.|+.+++++      +++ +..|+++.|+|++++
T Consensus        21 ~l~~pG-P-----~~~~~~Vl~am~~----~~i~HRs~~f~~i~~ea~~~l~~ll------g~~~~~~ii~~gsgT~a~~   84 (388)
T d1h0ca_          21 LLLGPG-P-----SNLPPRIMAAGGL----QMIGSMSKDMYQIMDEIKEGIQYVF------QTRNPLTLVISGSGHCALE   84 (388)
T ss_dssp             EECSSS-C-----CCCCHHHHHHHTC----CCCCTTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHHHHHH
T ss_pred             ccccCC-C-----CCCCHHHHHHhCc----CCCCCCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHHHHHH
Confidence            556666 3     2567888877642    22222221  123456666676666      343 336899999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhh-cCCccEEEEeCCCCccccCCC
Q 014769          122 VILSVLARPGANVLLPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFT  198 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~  198 (419)
                      .++..+..+|+++++...++++..  ..+...+..+..+..  .....++.+.++..+ ..+++++++++.+|.||.+.|
T Consensus        85 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~p  162 (388)
T d1h0ca_          85 AALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTK--DPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQP  162 (388)
T ss_dssp             HHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBC--CTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred             HHHHHhhccCCceeeecccceeeeecccccccccccccccc--CCccccchHHHHHHhccCCcceEEEeeeeeccccccC
Confidence            999999999999999998887543  333445555544443  334457777776654 447899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769          199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI  278 (419)
Q Consensus       199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  278 (419)
                         +++|.++|+++|+++++|.+++..    .....+..++.+   +++.|..|.++.++ .+|+++.+.        ..
T Consensus       163 ---i~~i~~~~~~~g~~~~vD~~qs~g----~~~~d~~~~~~D---~~~~s~~K~~~gp~-g~~~~~~~~--------~~  223 (388)
T d1h0ca_         163 ---LDGFGELCHRYKCLLLVDSVASLG----GTPLYMDRQGID---ILYSGSQKALNAPP-GTSLISFSD--------KA  223 (388)
T ss_dssp             ---CTTHHHHHHTTTCEEEEECTTTTT----TSCCCTTTTTCS---EEEEESSSTTCCCT-TCEEEEECH--------HH
T ss_pred             ---HHHHHHHhhcccccceeccccccc----cccccccccccc---eecccccccccCCC-ceEEEeecH--------HH
Confidence               999999999999999999999863    233334444443   77888999865443 356666543        22


Q ss_pred             HHHHHh--------------------h----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769          279 IDSIKD--------------------C----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP  334 (419)
Q Consensus       279 ~~~l~~--------------------~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  334 (419)
                      .+.+..                    .    ..+..+++.....++..++.......++....+.++..+.+++.+... 
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~-  302 (388)
T d1h0ca_         224 KKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQAL-  302 (388)
T ss_dssp             HHHHTTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHhhhhccccccccccccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhc-
Confidence            222211                    0    012334555566666666654334456777777788888888888775 


Q ss_pred             CCCCCC-CCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEE-ee--cCHHHHHHHHHHH
Q 014769          335 CISCPN-KPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA-FC--AEPSALKDGLGRM  408 (419)
Q Consensus       335 ~~~~~~-~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris-~~--~~~~~l~~~l~~l  408 (419)
                      ++.... .+.  ....+.+.+|+.     .+..+++..|++++||.+..|......+.|||| ++  .+.++|+.+++.|
T Consensus       303 g~~~~~~~~~~rs~~i~~~~~p~~-----~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL  377 (388)
T d1h0ca_         303 GLQLFVKDPALRLPTVTTVAVPAG-----YDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEAL  377 (388)
T ss_dssp             TCCBSSCSGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred             CcccccCCHHHcCCeEEEEECCCC-----CCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHH
Confidence            333221 111  122445566642     267888899988899999998766567899999 54  5789999999999


Q ss_pred             HHHHHHHhccC
Q 014769          409 KAFCQRHTKKH  419 (419)
Q Consensus       409 ~~~~~~~~~~~  419 (419)
                      +++++++.|+|
T Consensus       378 ~~~L~~l~k~~  388 (388)
T d1h0ca_         378 RAALQHCPKKK  388 (388)
T ss_dssp             HHHHHHSCCC-
T ss_pred             HHHHHHhcccC
Confidence            99999999886

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=2.2e-22  Score=187.50  Aligned_cols=320  Identities=12%  Similarity=0.093  Sum_probs=204.5

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCC-----------CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHH
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSG-----------IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSV  126 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g-----------~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~  126 (419)
                      .++++.+++++.+.+.+.    |..+.+           +.+.|+++++++      ++++++|++++|+|+++..++.+
T Consensus        11 ~~~p~~v~ea~~~~~~~~----~~np~~~~~~~~~~~~~~~~aR~~ia~l~------~~~~~~i~~~~~~T~~l~~~~~~   80 (376)
T d1eg5a_          11 TRVDDRVLEEMIVFYREK----YGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCATESINWILKT   80 (376)
T ss_dssp             CCCCHHHHHHHHHHHHTC----CCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHc----CCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEEECCHHHHHHhhhhc
Confidence            366788999999888753    222221           245688999998      78999999999999999998864


Q ss_pred             ----hcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769          127 ----LARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY  199 (419)
Q Consensus       127 ----l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  199 (419)
                          ...+|+.|++....|+.+..   .++..|.+++.+|+++  ++.+|+++++++++++++++++++++|+||..++ 
T Consensus        81 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~-  157 (376)
T d1eg5a_          81 VAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQP-  157 (376)
T ss_dssp             HHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC-
T ss_pred             ccccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCC--CCeECHHHHHHhcCCCceEEEEECCccccceeee-
Confidence                34577888888888876543   3455699999998764  4579999999999999999999999999999999 


Q ss_pred             HHHHHHHHHH--HhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          200 HHLQEIAEMA--RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       200 ~~l~~i~~~~--~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                        ++++.+++  ...++++++|.+++.    |..+..+..++.   .+++.|++|+++.+|..+.|+  +......  |.
T Consensus       158 --~~~i~~~~~~~~~~~~~~vD~~q~~----g~~~~d~~~~~~---D~~~~s~~K~~gp~G~~~l~~--~~~~~~~--p~  224 (376)
T d1eg5a_         158 --VEDVTRIVKKKNKETLVHVDAVQTI----GKIPFSLEKLEV---DYASFSAHKFHGPKGVGITYI--RKGVPIR--PL  224 (376)
T ss_dssp             --HHHHHHHHHHHCTTCEEEEECTTTT----TTSCCCCTTTCC---SEEEEEGGGGTSCTTCEEEEE--CTTSCCC--CS
T ss_pred             --ehhhhhhhhhcccCceeEEEeeecc----ccccccccccCc---cceecccceeecCCCceeEEe--ccCcccC--Cc
Confidence              55555554  444899999999986    333333444443   388899999988788655554  3321111  00


Q ss_pred             HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--CCCCCceEEEEeecCc
Q 014769          278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISC--PNKPEGSMVTMVKLNP  354 (419)
Q Consensus       278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~p~~g~~~~~~~~~  354 (419)
                      ... ...... ..+..+......+....... ................++.+.|........  ....... .+.+.++.
T Consensus       225 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~  301 (376)
T d1eg5a_         225 IHG-GGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPN-TLSVSFPN  301 (376)
T ss_dssp             BCS-SCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTT-EEEEECTT
T ss_pred             ccC-CCCcccccCCcccchhhhhHHHHhhcc-ccchhhhhhhhhhhhhhhccccccccccccccccccccc-eeeeccCC
Confidence            000 000011 12233444444443333321 122333444555566667777765422110  1111222 22333442


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~  413 (419)
                            .+...+. ..|.++||.+++|..+..                   .+++|+|++  ++++||+.+++.|++++.
T Consensus       302 ------~~~~~~~-~~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~  374 (376)
T d1eg5a_         302 ------IRGSTLQ-NLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS  374 (376)
T ss_dssp             ------CCHHHHH-HHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             ------CCHHHHH-HHHhhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence                  1345554 455889999988765421                   246999995  589999999999999876

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=1.5e-22  Score=185.53  Aligned_cols=330  Identities=10%  Similarity=0.021  Sum_probs=210.3

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE  121 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~  121 (419)
                      ++..||+..++     .+.+|++++|+.++.... ...|.......++|+.+++++      +. +..+++|+|+|+++.
T Consensus         2 ~~~~~f~s~n~-----~g~~P~v~~A~~~a~~~~-~~~~~~~~~~~~l~~~la~~~------g~-~~~v~f~~sGt~An~   68 (345)
T d1v72a1           2 PPALGFSSDNI-----AGASPEVAQALVKHSSGQ-AGPYGTDELTAQVKRKFCEIF------ER-DVEVFLVPTGTAANA   68 (345)
T ss_dssp             CCCCBCSCGGG-----CCCCHHHHHHHHHTTSSC-CCSTTCSHHHHHHHHHHHHHH------TS-CCEEEEESCHHHHHH
T ss_pred             CCCcCcCCCCC-----CCCCHHHHHHHHHHhccC-ccccCCCHHHHHHHHHHHHHH------CC-CcEEEECCchHHHHH
Confidence            46778887653     356899999998875433 346666667789999999998      33 357999999999999


Q ss_pred             HHHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCc------c-EEEEeCCCC
Q 014769          122 VILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT------A-AMVIINPGN  191 (419)
Q Consensus       122 ~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~-~v~i~~p~n  191 (419)
                      .++..++.+++.+++....+..+.   ......+..+..+.  +..+...+++.++..+....      . .++.+.+.|
T Consensus        69 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  146 (345)
T d1v72a1          69 LCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV--DGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQAT  146 (345)
T ss_dssp             HHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC--CCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC
T ss_pred             HHHHHHHhcCCccccccccceeeechhhHHHhcCccccccc--ccccccccHHHhhhhhcccccccccccceeeeeeccc
Confidence            999999998888887776654432   23344455554443  33455688999988876532      2 345566788


Q ss_pred             ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769          192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN  270 (419)
Q Consensus       192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  270 (419)
                      ++|...+.++++++.++|+++|+++++|+++....+...... ....... .......+.+|. +..+.  +........
T Consensus       147 ~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~--~~~~~~~~~  222 (345)
T d1v72a1         147 EVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKA-GVDALSFGATKN-GVLAA--EAIVLFNTS  222 (345)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGG-TCCEEEECCGGG-TCSSC--EEEEESSGG
T ss_pred             cccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccc-cccccccCcccc-ccccc--cccccchhh
Confidence            899999999999999999999999999999986544322111 1111111 122334445554 23332  333332211


Q ss_pred             CccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769          271 GIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV  350 (419)
Q Consensus       271 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  350 (419)
                            ................+.....++.. ..........+...+..++...+.+.+.+++++. +..|..++++++
T Consensus       223 ------~~~~~~~~~~~~~~~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~p~~~niv~~  294 (345)
T d1v72a1         223 ------LATEMSYRRKRAGHLSSKMRFLSAQI-DAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVE-VLGGTEANILFC  294 (345)
T ss_dssp             ------GHHHHHHHHHHTTCCCSSTHHHHHHH-HHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEE-EESCCCSSEEEE
T ss_pred             ------hhhhccccccccccccchhhHHhhhh-HHHHHHhhhhhhccchhhHHHHHHHHHHhcCCcE-eccCCCccEEEE
Confidence                  11111121122222222222222222 2211234445556666777788888898888887 446777888888


Q ss_pred             ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769          351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~  411 (419)
                      +++          .+.++.| .++|+.+.++.  ..++.+||+++  +++|+|+.+++.|+++
T Consensus       295 ~~~----------~~~~~~L-~~~gi~v~~~~--~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         295 RLD----------SAMIDAL-LKAGFGFYHDR--WGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             EEC----------HHHHHHH-HHTTCBCBCSS--SSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             EcC----------HHHHHHH-HHcCCCccccC--CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            875          2345566 55699875543  23679999984  6899999999999874

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=3.9e-22  Score=181.55  Aligned_cols=318  Identities=13%  Similarity=0.088  Sum_probs=192.7

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR  138 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~  138 (419)
                      +.+|++++|+.++.... ...|++..+..++|+.+++++      +.++++|++|+|+|++++.++..+..+++.+++..
T Consensus        11 g~~P~v~eAl~~~~~~~-~~~y~~~~~~~~lr~~ia~~~------g~~~~~v~~tsggtean~~a~~~~~~~~~~~~~~~   83 (340)
T d1svva_          11 GMHPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELL------ERPDADVHFISGGTQTNLIACSLALRPWEAVIATQ   83 (340)
T ss_dssp             CCCHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHH------TCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEET
T ss_pred             CCCHHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHh------CCCcceEEEcCCHHHHHHHHHHHHhhhcccccccc
Confidence            56899999999876543 346877777789999999999      67888999999999999999999999999999998


Q ss_pred             CCCCCcHHHH--hhcCCEEEEEeccCCCCcccChHHHHHhhc------CCccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769          139 PGWPYYEGIA--QRKQVEVRHFDLLPERNWEVDLDAVEALAD------KNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR  210 (419)
Q Consensus       139 p~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~  210 (419)
                      +.+..+....  ...+.......  .... ..+.+...+...      ..+..++++.+.|++|.+.+.+++..+.+.|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (340)
T d1svva_          84 LGHISTHETGAIEATGHKVVTAP--CPDG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCK  160 (340)
T ss_dssp             TSHHHHSSTTHHHHTTCCEEEEC--CTTS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHH
T ss_pred             ccceeeeecccccccceeeeecc--cccc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhcccc
Confidence            8876543222  22232322222  2222 223333222211      12344555555566778888899999999999


Q ss_pred             hCCCeEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc
Q 014769          211 KLRVMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY  289 (419)
Q Consensus       211 ~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~  289 (419)
                      +++.++++|++|.......... ........ ...+...+..|..  .+.+.++.......  .   .............
T Consensus       161 ~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~  232 (340)
T d1svva_         161 EHGLYLFLDGARLASALSSPVNDLTLADIAR-LTDMFYIGATKAG--GMFGEALIILNDAL--K---PNARHLIKQRGAL  232 (340)
T ss_dssp             HHTCEEEEECTTHHHHHTSTTCCCCHHHHHH-HCSEEEEECTTTT--CSSCEEEEECSGGG--C---TTHHHHHHHTTCC
T ss_pred             cccceeeeeccceeeeecccccccccccccc-cceeeecCCcccc--ccccccccccchhh--h---hhhhhhcccccCc
Confidence            9999999999997644332221 11111111 1224444555543  33334444432211  1   0111111111111


Q ss_pred             cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHH
Q 014769          290 SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALK  369 (419)
Q Consensus       290 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~  369 (419)
                      .........++...++   ........++...++..+.+.|+.. |+. +..|..++++++.++.          +...+
T Consensus       233 ~~~~~~~~aa~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~-g~~-~~~p~~~~~v~~~~~~----------~~~~~  297 (340)
T d1svva_         233 MAKGWLLGIQFEVLMK---DNLFFELGAHSNKMAAILKAGLEAC-GIR-LAWPSASNQLFPILEN----------TMIAE  297 (340)
T ss_dssp             CTTTHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCCSSSEECBEEEH----------HHHHH
T ss_pred             cchhhHHHHHHHHHhh---hhHHHHHHHHHHHHHhhhHHHHhcC-CCe-eecCCCceEEEEeCCH----------HHHHH
Confidence            1222222333333333   3445555667778888888888887 787 4467778888877642          34455


Q ss_pred             HHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769          370 LAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKA  410 (419)
Q Consensus       370 ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~  410 (419)
                      ++++..+...+... ..++++|++++  +++++|+++++.|++
T Consensus       298 l~~~~~~~~~~~~~-~~~~~vR~s~~~~~t~edid~~l~~l~~  339 (340)
T d1svva_         298 LNNDFDMYTVEPLK-DGTCIMRLCTSWATEEKECHRFVEVLKR  339 (340)
T ss_dssp             HTTTEECEEEEEET-TTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             HHHhhhhhcccccC-CCCcEEEEECCCCCCHHHHHHHHHHHhc
Confidence            54442222222221 23678999884  689999999999986

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=2.5e-20  Score=170.09  Aligned_cols=216  Identities=20%  Similarity=0.232  Sum_probs=165.9

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~  160 (419)
                      ....|++.|++.-        ..+..++++++++|+..++.+++++||.|++++..|.+....    +...|+++.+++.
T Consensus        60 T~~~LE~~la~LE--------g~~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~  131 (392)
T d1gc0a_          60 TLNLLEARMASLE--------GGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM  131 (392)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCcceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCc
Confidence            4568888888876        346788999999999999999999999999999999976544    4556888887753


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             .|.+.+++++++++++|++.+|.||+..+.+   +++|+++|+++|+++++|..+..-.+.    .++ .++.
T Consensus       132 -------~d~~~~~~ai~~~t~lv~~Esp~NP~l~v~D---i~~i~~ia~~~g~~~vvDnT~atP~~~----~Pl-~~Ga  196 (392)
T d1gc0a_         132 -------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ----RPL-ELGA  196 (392)
T ss_dssp             -------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC----CGG-GGTC
T ss_pred             -------cCHHHHHHhCCCCCeEEEecccccceeeecc---hHHHHHHHHhcCCEEEEecCccCcccc----ChH-HhCC
Confidence                   3789999999999999999999999999999   999999999999999999999753221    122 3444


Q ss_pred             CCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHH--hhhc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIK--DCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~--~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                      +   |++.|.+|.++..| .-.|.++++.        +.+.+++  ..+. .....++...+.+..-++.     +..+.
T Consensus       197 D---ivihS~TKyi~Ghsd~~~G~v~~~~--------~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~T-----L~lRm  260 (392)
T d1gc0a_         197 D---LVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNLRM  260 (392)
T ss_dssp             S---EEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             C---EEEEecceeecCCcccccccccchh--------HHHHHHHHHHHHHccCCcCChhhHHHHHhcccc-----HHHHH
Confidence            4   89999999976655 4456666644        4554443  3333 3456677777776666655     66667


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCC
Q 014769          317 DTLRESAEICYDGVKEIPCISCP  339 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~  339 (419)
                      ++..++...+.+.|+++|.+..|
T Consensus       261 ~~~~~nA~~lA~~L~~hp~V~~V  283 (392)
T d1gc0a_         261 DRHCANAQVLAEFLARQPQVELI  283 (392)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCccEE
Confidence            77888888999999887655433

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.87  E-value=1.9e-19  Score=164.34  Aligned_cols=279  Identities=15%  Similarity=0.185  Sum_probs=194.4

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~  160 (419)
                      ....|++.+++.-        ..+..+++++|++|+..++.+++++||.|+++...|.+...    .+...|+++..++.
T Consensus        64 T~~~LE~~la~LE--------gg~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~  135 (397)
T d1y4ia1          64 TTDALEKKLAVLE--------RGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA  135 (397)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCccceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCceEeeccCC
Confidence            3457777777765        34568889999999999999999999999999999986543    45677999888753


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             .|.+.+++++++++++|++.+|.||+..+.+   +++|+++|+++|+++++|..+..-.    ...++ .++.
T Consensus       136 -------~d~~~~~~~i~~~Tklv~~Esp~NP~l~v~D---i~~i~~iA~~~gi~~vvDnT~atP~----~~~Pl-~~Ga  200 (397)
T d1y4ia1         136 -------GKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPY----CQQPL-QLGA  200 (397)
T ss_dssp             -------TSHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTT----TCCGG-GGTC
T ss_pred             -------CCHHHHHHhcCCCCcEEEecCCcccceeecc---cHHHHHHhhcCCceEEecCcccCcc----cCcch-hcCC
Confidence                   3689999999999999999999999999999   9999999999999999999987522    11222 3344


Q ss_pred             CCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHH--hhhcc-ccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIK--DCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~--~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                      +   |++.|++|.++..+--+ |.+++++        +.+...+  ..+.. ...+++...+.+..-|+.     +.-+.
T Consensus       201 D---ivihS~TKyi~Ghsdvl~G~v~~~~--------~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~T-----L~lRm  264 (397)
T d1y4ia1         201 D---IVVHSVTKYINGHGDVIGGIIVGKQ--------EFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRM  264 (397)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEECH--------HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             C---EEEEehhhhcCCCcceeeeccCCCH--------HHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCc-----HHHHH
Confidence            4   99999999977766444 5555443        3444333  33332 455667766666666654     55666


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCC-----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769          317 DTLRESAEICYDGVKEIPCISCPNKP-----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT  379 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~~p-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  379 (419)
                      ++..++...+.+.|+++|.+..|..|                 .+|++. +.+..        ..+.+.+++..-.+.. 
T Consensus       265 ~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~s-f~~~~--------~~~~~~~f~~~L~l~~-  334 (397)
T d1y4ia1         265 ERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIIS-FEIAG--------GLEAGRRMINSVELCL-  334 (397)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEE-EEETT--------HHHHHHHHHHTCSSSE-
T ss_pred             HHHHHHHHHHHHHHHhCCCcCeEeCCCCCCCccccccccccCCCCeEEE-EEecC--------CHHHHHHHHHcCCccc-
Confidence            77788888999999987766544444                 355554 45542        3333344444333321 


Q ss_pred             cCCCCC---------------------------CCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769          380 PGIYVG---------------------------LKNWLRIAFCAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       380 ~g~~~~---------------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+..+|                           .++.+|||+|.  |+.+.+++.|++++++
T Consensus       335 ~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlsvGl--Ed~~DLi~Dl~~AL~~  394 (397)
T d1y4ia1         335 LAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGL--EDPEDIINDLEHAIRK  394 (397)
T ss_dssp             ECSCCSCSSCEEECTTTTTTSSSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred             eeeccCcccceeeCccccccccCCHHHHHHcCCCcCEEEEEecc--CCHHHHHHHHHHHHHH
Confidence            122221                           14689999997  3556667777777765

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=3e-19  Score=162.64  Aligned_cols=220  Identities=18%  Similarity=0.220  Sum_probs=163.5

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~  160 (419)
                      ....|++.+++.-        ..+..+++++|++|+..++.+++++||.|++....|.+..    ..+...|..+.++..
T Consensus        51 t~~~le~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~  122 (384)
T d1cs1a_          51 TRDVVQRALAELE--------GGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ  122 (384)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCCceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccccccccC
Confidence            4467888888876        3467899999999999999999999999999999997653    334445666666542


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             .|.+.++.++.+++++|++.+|.||+..+.+   +++|+++|+++|+++|+|..+....+    ..++ .++.
T Consensus       123 -------~d~~~~~~~~~~~t~~v~~EspsNP~l~v~D---i~~i~~ia~~~g~~~vVDNT~atP~~----~~Pl-~~Ga  187 (384)
T d1cs1a_         123 -------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPAL----QNPL-ALGA  187 (384)
T ss_dssp             -------TCHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCGG-GGTC
T ss_pred             -------CCHHHHHhhccccccEEEEeccccccceecc---HHHHhhhhhhcCcEEEEeccccCccc----cccc-ccCC
Confidence                   3778899999999999999999999999999   99999999999999999999964221    1222 3344


Q ss_pred             CCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                      +   |++.|++|.++..|- =.|.++++++       ++.+.++... ......++...+.+..-|+.     +.-+.++
T Consensus       188 D---iVvhS~TKyi~Ghsdv~~G~vv~~~~-------~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~T-----L~lRm~~  252 (384)
T d1cs1a_         188 D---LVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPRMEL  252 (384)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHHHHH
T ss_pred             C---EEEEccccccccCCCcccccccCCch-------hhhhhhhhhhhhhhhccccccHHHHhhccch-----hHHHHHH
Confidence            4   999999999876653 3455665442       3555555443 33455666666666665554     6666677


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          319 LRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ..++...+.+.|+.+|.+..|..|
T Consensus       253 ~~~nA~~lA~~L~~hp~V~~V~yP  276 (384)
T d1cs1a_         253 AQRNAQAIVKYLQTQPLVKKLYHP  276 (384)
T ss_dssp             HHHHHHHHHHHHTTCTTEEEEECT
T ss_pred             HHHHHHHHHHhcccCCceeeeeec
Confidence            788899999999987665444444

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.86  E-value=1.1e-20  Score=177.61  Aligned_cols=330  Identities=11%  Similarity=0.025  Sum_probs=211.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-CC----C--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-YA----T--NSGIPPARRAIADYLSRDLPYKLSADDVYVT  113 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-Y~----~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t  113 (419)
                      .+++|-|+.+.-     .+++..+.+++.+.+.+...+. ..    .  ..-..++|+.+++++      ++++++|++|
T Consensus        25 ~~~~iYLd~as~-----g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~ll------ga~~~ei~~~   93 (404)
T d1qz9a_          25 PEGVIYLDGNSL-----GARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVT   93 (404)
T ss_dssp             CTTCEECCTTTS-----CCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEEC
T ss_pred             CCCCEEcCCccc-----ccCCHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHh------CCCCCcEEEe
Confidence            456788888753     3567788888888876532111 10    0  122346888888888      7899999999


Q ss_pred             ccHHHHHHHHHHHh------cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEe
Q 014769          114 LGCKQAVEVILSVL------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII  187 (419)
Q Consensus       114 ~g~~~al~~~~~~l------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~  187 (419)
                      +++|++++.++...      ..+++.|++.+..++.........+.++......  .....+.+.+++++++++++|.++
T Consensus        94 ~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~T~lV~i~  171 (404)
T d1qz9a_          94 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYT--LRLVDSPEELPQAIDQDTAVVMLT  171 (404)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCE--EEEESSGGGHHHHCSTTEEEEEEE
T ss_pred             cCchHHHHHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeecee--ccccccchhHHHhcCCCceEEEEe
Confidence            99999998876532      3578999988887775433333333222222221  122457788999999999999999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769          188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN  267 (419)
Q Consensus       188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  267 (419)
                      +.+|.||..+|   +++|+++|+++++.+++|.+++..    .....+..++.+   +++.|.+|.++.+...+|+++.+
T Consensus       172 ~v~~~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~g----~~~~~~~~~~~d---~~~~s~~K~~~~~~g~~g~~~~~  241 (404)
T d1qz9a_         172 HVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAG----AVPVDLHQAGAD---YAIGCTYKYLNGGPGSQAFVWVS  241 (404)
T ss_dssp             SBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCHHHHTCS---EEEECSSSTTCCCTTCCCEEEEC
T ss_pred             cccccccceec---HHHHhccccccccceeEEeecccc----ccccccccccce---EEEEechhhcccCCceEEEEEec
Confidence            99999999999   999999999999999999999873    233334444443   77788999865544446777765


Q ss_pred             CCCCccchhhHHHHHHh------------------------hhccccCCchHHHHHHHH---HHcccchHHHHHHHHHHH
Q 014769          268 DPNGIFQKSGIIDSIKD------------------------CLSIYSDIPTFIQGAIPQ---ILEKTKEDFFCKLIDTLR  320 (419)
Q Consensus       268 ~~~~~~~~~~~~~~l~~------------------------~~~~~~~~~~~~~~a~~~---~l~~~~~~~~~~~~~~~~  320 (419)
                      ...        .+.+..                        ......+.+......+..   .+.....+..++....+.
T Consensus       242 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (404)
T d1qz9a_         242 PQL--------CDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALT  313 (404)
T ss_dssp             TTT--------TTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             hhh--------hhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhH
Confidence            421        110000                        000112333333333333   333333345555555555


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCc----eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-
Q 014769          321 ESAEICYDGVKEIPCISCPNKPEG----SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-  395 (419)
Q Consensus       321 ~~~~~l~~~l~~~~~~~~~~~p~~----g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-  395 (419)
                      .....+.+.+...+++.++ .|..    +.++.+.++        +..++...| .++||.+...    .++.||||++ 
T Consensus       314 ~~~~~l~~~~~~~~~~~i~-~p~~~~~r~~~vsf~~~--------~~~~v~~~L-~~~gi~~~~r----~~~~lRiS~~h  379 (404)
T d1qz9a_         314 DLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPRIMRFGFTP  379 (404)
T ss_dssp             HHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTTEEEEECCT
T ss_pred             HHHHHHHHhhccCCCEEEE-CCCCccceeeEEEEecC--------CHHHHHHHH-HHCCCEEeec----CCCeEEEECCC
Confidence            5555555566566677644 3321    234455554        456666666 6789975321    2478999984 


Q ss_pred             --cCHHHHHHHHHHHHHHHHHH
Q 014769          396 --AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       396 --~~~~~l~~~l~~l~~~~~~~  415 (419)
                        ++++||+++++.|++++++.
T Consensus       380 ~ynt~~did~~~~~L~~vl~~~  401 (404)
T d1qz9a_         380 LYTTFTEVWDAVQILGEILDRK  401 (404)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHhC
Confidence              47899999999999999863

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=4e-19  Score=161.81  Aligned_cols=219  Identities=16%  Similarity=0.133  Sum_probs=162.4

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~  160 (419)
                      ....|++.|+++-        ..+..+++++|++|+.. +..++++||.|++..+.|.+....+    ...|+.+.++..
T Consensus        50 t~~~le~~la~LE--------~~~~a~~fsSGMaAisa-ll~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~  120 (380)
T d1ibja_          50 TRDALESLLAKLD--------KADRAFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT  120 (380)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT
T ss_pred             HHHHHHHHHHHHc--------CCceEEehhhHHHHHHH-HHHhhCCCCEEEEEecccccccchhhhhhccccccccccCc
Confidence            3457778887775        34678889999999975 5678889999999999998765544    445777776642


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                             .+.+.++.++++++++|++.+|.||+..+.+   +++|+++|+++|+++|+|..+.....    ..++ .++.
T Consensus       121 -------~~~~~~~~ai~~~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vVDnT~atP~~----~~Pl-~~Ga  185 (380)
T d1ibja_         121 -------TKLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVL----SRPL-ELGA  185 (380)
T ss_dssp             -------TSHHHHHHHCCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT----CCGG-GTTC
T ss_pred             -------chHHHHHHHhccCccEEEecccccccccccc---HHHHHHHHHHcCCeEEeecccccccc----cccc-ccCC
Confidence                   3688999999999999999999999999999   99999999999999999999975221    1222 3344


Q ss_pred             CCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                      +   +++.|++|.++..|-- .|.+++++.       .+.+.++.... .....++...+.+..-++.     +..+.++
T Consensus       186 D---iVvhS~TKyi~GhsDv~~G~v~~~~~-------~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----l~lRm~~  250 (380)
T d1ibja_         186 D---IVMHSATKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT-----MALRIEK  250 (380)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEECSH-------HHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT-----HHHHHHH
T ss_pred             C---EEEecccceeccccCccccccccchh-------hHHHHHHhhccccCCcCCHHHHHHHHhcchh-----hhhhHHH
Confidence            4   9999999998776643 455555431       35555555543 3445677776776666655     6677778


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          319 LRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ..++...+.+.|+++|.+..|..|
T Consensus       251 ~~~nA~~lA~~L~~hp~V~~V~yP  274 (380)
T d1ibja_         251 QQENARKIAMYLSSHPRVKKVYYA  274 (380)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEECT
T ss_pred             HHHHHHHHHHHHHhCCCeeEEecc
Confidence            888899999999987766544443

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.85  E-value=5e-19  Score=163.50  Aligned_cols=327  Identities=14%  Similarity=0.111  Sum_probs=208.2

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCc--EEEcccHHHHHHHHHHHhcCCCCe
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVLARPGAN  133 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l~~~gd~  133 (419)
                      .++++.|++++.+.    ..+.+++  ..-..+.|+.+++++      ++++++  +++|+|+|++++.++..+..+++.
T Consensus         9 ~~~~~~V~~A~~~~----~~~~~~~~~~~~~~~~r~~l~~l~------~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~   78 (361)
T d1m32a_           9 LTTSRTVKEAMLFD----SCTWDDDYNIGVVEQIRQQLTALA------TASEGYTSVLLQGSGSYAVEAVLGSALGPQDK   78 (361)
T ss_dssp             CCCCHHHHHTTCCC----CCTTSHHHHTTTHHHHHHHHHHHH------CSSSSEEEEEEESCHHHHHHHHHHHSCCTTCC
T ss_pred             CCCCHHHHHHhhhh----ccCCCcHHHHHHHHHHHHHHHHHh------CCCCCCEEEEECCCHHHHHHHHHHHhhhhccc
Confidence            35677777765432    2222221  345678999999998      666665  788899999999999999998888


Q ss_pred             EEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769          134 VLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK  211 (419)
Q Consensus       134 vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  211 (419)
                      +++....+..  ........+.....+..........+.+.......++++.+.+++.+|.||...|   +++|.++|++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~---i~~i~~~~~~  155 (361)
T d1m32a_          79 VLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAHR  155 (361)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHH
T ss_pred             cceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhccCccceEEEeeecccccchh---hhhhhhhhcc
Confidence            8877766543  2333445555655555443333223344445556678999999999999999999   8999999999


Q ss_pred             CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCC---------CccchhhHH-H
Q 014769          212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPN---------GIFQKSGII-D  280 (419)
Q Consensus       212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~---------~~~~~~~~~-~  280 (419)
                      +|+++++|.+++...    .+..+..++.   .+++.|.+|+++. +|  +|+++.+++.         ......... .
T Consensus       156 ~g~~~~vDa~qs~G~----~~~d~~~~~~---D~~~~s~~K~l~gp~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T d1m32a_         156 YGKTYIVDAMSSFGG----IPMDIAALHI---DYLISSANKCIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWR  226 (361)
T ss_dssp             HTCEEEEECTTTTTT----SCCCTTTTTC---SEEEEESSSTTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHH
T ss_pred             cceeeEeecccccCc----cccccccccc---ceEEeeecccccCCCC--ceEEEechhhhhhhccccccccccchhhhc
Confidence            999999999999732    3333444444   4888899998644 35  7888776410         000000011 1


Q ss_pred             HHHhh-hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCccc
Q 014769          281 SIKDC-LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWL  356 (419)
Q Consensus       281 ~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~  356 (419)
                      ..... .....+++.....++...+..... ........+.+...+.+.+.++.. +......+.  +...+.+.+|+..
T Consensus       227 ~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~rs~~v~~~~~p~~~  305 (361)
T d1m32a_         227 CMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDP  305 (361)
T ss_dssp             HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCT
T ss_pred             cccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhc-CCcccCChhhcCCcEEEEECCCCC
Confidence            11111 122356666666666666654332 234455556666677777777766 443222221  1223344555321


Q ss_pred             ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHH
Q 014769          357 LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~  412 (419)
                         ..+..+++..| .++||.+.+|.. ...+.+||++ + .+++||+++++.|++++
T Consensus       306 ---~~~~~~~~~~l-~~~gi~i~~G~~-~~~~~~Ris~~g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         306 ---QYRFSEFYRRL-KEQGFVIYPGKV-SQSDCFRIGNIGEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             ---TCCHHHHHHHH-HHTTEECEECCC-SSSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             ---CCCHHHHHHHH-HHCCcEEECCCc-CCCCEEEEeCCCCCCHHHHHHHHHHHHHHc
Confidence               12456666665 778999988753 3467899996 3 68899999999999875

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=1.6e-19  Score=165.06  Aligned_cols=319  Identities=14%  Similarity=0.102  Sum_probs=209.2

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL  135 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl  135 (419)
                      .+.+++|+++|.+..    .+.+++  ..-+.+.++.+++.+    +  .+.+.+++++|+|++++.++..+..+||+|+
T Consensus         9 ~~v~~~V~~am~~~~----~~hr~~~f~~i~~~~~~~l~~ll----~--~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vl   78 (348)
T d1iuga_           9 VRLHPKALEALARPQ----LHHRTEAAREVFLKARGLLREAF----R--TEGEVLILTGSGTLAMEALVKNLFAPGERVL   78 (348)
T ss_dssp             CCCCHHHHHHHHSCC----CCTTSHHHHHHHHHHHHHHHHHH----T--CSSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCCHHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHh----C--CCCCEEEEeCchHHHHHHHHHhcccccccce
Confidence            357788888775432    222332  011234444455544    3  4556789999999999999999999999999


Q ss_pred             eeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769          136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR  213 (419)
Q Consensus       136 v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  213 (419)
                      +...++++  +...++.++..+..+.....  ..++++.   ....+.+.+++++..+.||+..|   +++|.++|++++
T Consensus        79 v~~~G~f~~~~~~~a~~~~~~~~~~~~~~g--~~~~~~~---~~~~~~~~v~~~h~eTstG~~~~---i~~i~~~~~~~~  150 (348)
T d1iuga_          79 VPVYGKFSERFYEIALEAGLVVERLDYPYG--DTPRPED---VAKEGYAGLLLVHSETSTGALAD---LPALARAFKEKN  150 (348)
T ss_dssp             EEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCTTT---SCCSSCSEEEEESEETTTTEECC---HHHHHHHHHHHC
T ss_pred             eecchHHHHHHHHHHHhcCcccccccccCC--Ccccccc---ccccCCCeeEEEecchhhhhhcc---HHHHHHHHHhhh
Confidence            98877654  35667778888887775432  2334333   23457889999999999999999   788888887774


Q ss_pred             --CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCC--------CccchhhHHHHH
Q 014769          214 --VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPN--------GIFQKSGIIDSI  282 (419)
Q Consensus       214 --~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~--------~~~~~~~~~~~l  282 (419)
                        .++++|.+.+...    .+.++..++.+   +++.|..|.+ +.||  +|+++.++..        ..+   ++...+
T Consensus       151 ~~~l~~vDavss~g~----~~i~~d~~~iD---~~~~~sqK~l~gppG--~~~v~~s~~~le~~~~~~~~~---dl~~~~  218 (348)
T d1iuga_         151 PEGLVGADMVTSLLV----GEVALEAMGVD---AAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYL---DLAREL  218 (348)
T ss_dssp             TTCEEEEECTTTBTT----BCCCSGGGTCS---EEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTT---CHHHHH
T ss_pred             ccceeechhhhcccc----cccccccccCC---EEEeccccceecCCc--eeeeeechHHHhhhccccccc---chhhhh
Confidence              7889999988632    33344444433   7788899987 5566  7888886420        011   222223


Q ss_pred             Hhh--hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCceEEEEeecCcccccC
Q 014769          283 KDC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-PEGSMVTMVKLNPWLLED  359 (419)
Q Consensus       283 ~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~~g~~~~~~~~~~~~~~  359 (419)
                      +..  ..+.++++....+++.++|+....+ ..+..++.+...+.++..++.. ++..... ...+ ...+.+|+.    
T Consensus       219 ~~~~~~~~~~Tp~v~~i~~l~~aL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-gl~~~~~~~s~~-v~~~~~P~g----  291 (348)
T d1iuga_         219 KAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPA-VAAFYLPEG----  291 (348)
T ss_dssp             HHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTT-CEEEECCTT----
T ss_pred             hhhccCcccccccchHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhhhhhhh-hhccChhhcCCe-EEEEECCCC----
Confidence            222  2335677888888888888764433 3333334344445555555444 5542211 1122 345666642    


Q ss_pred             CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHHHH
Q 014769          360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~~~  415 (419)
                       .+..++...| +++|+.+.+|........|||+. + .+.++++.+++.|++++++.
T Consensus       292 -~~~~~~~~~l-~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l~~~  347 (348)
T d1iuga_         292 -VPYARVKEAF-AQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  347 (348)
T ss_dssp             -CCHHHHHHHH-HTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHH-HHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence             2567776655 78899999987655567899997 4 58899999999999999875

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.85  E-value=9.4e-20  Score=169.48  Aligned_cols=327  Identities=14%  Similarity=0.123  Sum_probs=212.2

Q ss_pred             eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCC-CCCcEEEcccHHHHH
Q 014769           44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKL-SADDVYVTLGCKQAV  120 (419)
Q Consensus        44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~g~~~al  120 (419)
                      .+-|+.| |     .+.++.|+++|.    ....+.++.  ..-+.+.|+.+++++      ++ +...|++++|+|+++
T Consensus        19 ~~l~~PG-P-----~~v~~~Vl~am~----~~~~~hr~~ef~~i~~~~r~~l~~ll------~~~~~~~i~~~g~gT~~~   82 (377)
T d1vjoa_          19 RLLLGPG-P-----SNAHPSVLQAMN----VSPVGHLDPAFLALMDEIQSLLRYVW------QTENPLTIAVSGTGTAAM   82 (377)
T ss_dssp             CEECSSS-C-----CCCCHHHHHHHS----SCCCCTTSHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHH
T ss_pred             ceeecCC-C-----CCCCHHHHHHhC----cCCCCCCCHHHHHHHHHHHHHHHHHh------CCCCCeEEEEcCcHHHHH
Confidence            3555655 2     356788877763    222333432  123456666666666      33 345788889999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHH-hhcCCccEEEEeCCCCccccCC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGNPCGNVF  197 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~nptG~~~  197 (419)
                      +.++..+..+|+++++....+...  .......+.....+.....  ...+.+.... ....+++.+.+++.+|.||...
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~  160 (377)
T d1vjoa_          83 EATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWG--EVFSLEELRTALETHRPAILALVHAETSTGARQ  160 (377)
T ss_dssp             HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred             HHHHHhccccccccceeeechhhhhhhhhhhhhcccccccccCCC--CcccchhhhhhhhcCcceeeeeeeeeccceeee
Confidence            999999999999999888777643  3344555666665554322  2344444443 3445788899999999999999


Q ss_pred             CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769          198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG  277 (419)
Q Consensus       198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  277 (419)
                      +   ++++.++|+++|.++++|.+++..    .....+..++.+   +++.|.+|.++.|+ .+|+++.+.        .
T Consensus       161 ~---i~~i~~~~~~~g~~~~vDa~~~~g----~~~~~~~~~~~d---~~~~s~~K~~~gp~-g~~~~~~~~--------~  221 (377)
T d1vjoa_         161 P---LEGVGELCREFGTLLLVDTVTSLG----GVPIFLDAWGVD---LAYSCSQKGLGCSP-GASPFTMSS--------R  221 (377)
T ss_dssp             C---CTTHHHHHHHHTCEEEEECTTTTT----TSCCCTTTTTCS---EEECCSSSTTCSCS-SCEEEEECH--------H
T ss_pred             c---hhhhhhhhhhccceEEEecchhhh----hhhhcccccccc---eeeecccccccCCC-EEEEecchh--------h
Confidence            9   999999999999999999999862    233334444443   77888899854432 356655543        2


Q ss_pred             HHHHHHhh---------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769          278 IIDSIKDC---------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCI  336 (419)
Q Consensus       278 ~~~~l~~~---------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  336 (419)
                      .++.....                     .....+++.....++..++........+....+.+++...+.+.+... ++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~-~~  300 (377)
T d1vjoa_         222 AIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GL  300 (377)
T ss_dssp             HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             HHhhhhccCCCCcceeeccchhhhccCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhcc-Cc
Confidence            22221110                     112233344444444444443334456677777888888888888775 44


Q ss_pred             CCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHH
Q 014769          337 SCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAF  411 (419)
Q Consensus       337 ~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~  411 (419)
                      ..+..+.  ....+.+.+++.     .+..+++..|++++||.+..|......+.||+|+ +  .++|+|+++++.|+++
T Consensus       301 ~~~~~~~~rs~~v~~~~~p~~-----~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~  375 (377)
T d1vjoa_         301 SLHVEKEYRLPTLTTVCIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQV  375 (377)
T ss_dssp             CBSSCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             eeecChHhcCCeEEEEECCCC-----CCHHHHHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHH
Confidence            4232221  122334456542     2578888888889999999988765678999995 5  4689999999999988


Q ss_pred             HH
Q 014769          412 CQ  413 (419)
Q Consensus       412 ~~  413 (419)
                      ++
T Consensus       376 l~  377 (377)
T d1vjoa_         376 LR  377 (377)
T ss_dssp             HC
T ss_pred             hC
Confidence            74

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.85  E-value=9.6e-19  Score=159.86  Aligned_cols=220  Identities=13%  Similarity=0.107  Sum_probs=160.5

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~  160 (419)
                      ....|++.|+++-        ..+..+++++|+.|+..++.+++++||.|++....|.+...    .+...|+.+..+..
T Consensus        68 t~~~LE~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~  139 (398)
T d1qgna_          68 TTVVLEEKISALE--------GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP  139 (398)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred             HHHHHHHHHHHHh--------CCceEEEecCcchHHHHHHhhcccccccccccccccchhhhhhcccccccccccccccc
Confidence            4467888888875        34678999999999999999999999999999999987544    44556777777642


Q ss_pred             cCCCCcccChHH-HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769          161 LPERNWEVDLDA-VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG  239 (419)
Q Consensus       161 ~~~~~~~~~~~~-l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  239 (419)
                             .+.+. .+....+++++|++.+|.||+..+.+   +++|+++|+++|+++|+|..+..-..    ..++ .++
T Consensus       140 -------~~~~~~~~~~~~~~t~~v~~EspsNP~l~v~D---i~~ia~ia~~~g~~~vVDnT~atP~~----~~Pl-~~G  204 (398)
T d1qgna_         140 -------ADVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN----QKAL-ALG  204 (398)
T ss_dssp             -------SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCTT-TTT
T ss_pred             -------cchhhhhhhhccccceEEEccCccccccccch---HHHHHHHHhhcCCEEEecceeecccc----CCch-hhC
Confidence                   13333 34456678999999999999999999   99999999999999999999874221    1222 334


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                      .+   |++.|++|.++..|--+|-+++.+       .++...++.... .....++...+.+..-++.     +.-+.++
T Consensus       205 aD---iVihS~TKy~~Ghsdv~~G~v~~~-------~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----L~lRm~~  269 (398)
T d1qgna_         205 AD---LVLHSATKFLGGHNDVLAGCISGP-------LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQQ  269 (398)
T ss_dssp             CS---EEEECTTTTTTCSSSCCCEEEEEC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHHH
T ss_pred             CC---EEEEechhhcCcccceeehhhcch-------hhhhhhhhhhcccCCCcCCHHHHHHHHhcchH-----HHHHHHH
Confidence            44   899999999877664444444433       146666666543 3455676666666666654     6666777


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          319 LRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ..++...+.+.|+++|.+..|..|
T Consensus       270 ~~~nA~~lA~~L~~hp~V~~V~yP  293 (398)
T d1qgna_         270 QNSTALRMAEILEAHPKVRHVYYP  293 (398)
T ss_dssp             HHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHhCCCeeecCCC
Confidence            888889999999987765534344

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=1.2e-19  Score=169.14  Aligned_cols=322  Identities=13%  Similarity=0.093  Sum_probs=207.8

Q ss_pred             CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCC--CCCCCcEEEcccHHHHHHHHHHHhc---CCCC
Q 014769           58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY--KLSADDVYVTLGCKQAVEVILSVLA---RPGA  132 (419)
Q Consensus        58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~--~~~~~~i~~t~g~~~al~~~~~~l~---~~gd  132 (419)
                      .+.++.|+++|.    ......+++  ...++-+.+.+.+++..+.  +.+++.|++|+|+|++++.++..+.   ++||
T Consensus        12 ~~v~~~V~~Am~----~~~~~hr~~--~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd   85 (382)
T d2bkwa1          12 IILSGAVQKALD----VPSLGHTSP--EFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNK   85 (382)
T ss_dssp             CCCCHHHHHTTS----CCCCCTTSH--HHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCC
T ss_pred             CCCCHHHHHHhC----cccCCCCcH--HHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCC
Confidence            356788877652    222223332  1223333344444444442  3466789999999999999999986   5799


Q ss_pred             eEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCHHHHHHHHHHH
Q 014769          133 NVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMA  209 (419)
Q Consensus       133 ~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~  209 (419)
                      +|++....+++.  ...++..+.....+...+ .+...+.+.++..+. .+++.+++++.+|.||...+   +.++.+.|
T Consensus        86 ~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---~~~~~~~~  161 (382)
T d2bkwa1          86 NVLVVSTGTFSDRFADCLRSYGAQVDVVRPLK-IGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQAI  161 (382)
T ss_dssp             EEEEECSSHHHHHHHHHHHHTTCEEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHH
T ss_pred             ceEEEEechhhhhhhhhccccccccccccccC-CCCccchhHHHHHhhhccchheeeeecccccccccc---chhhhhhc
Confidence            999998777653  345566787777665332 334567777776654 46789999999999999999   66666666


Q ss_pred             HhC--CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHH---
Q 014769          210 RKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIK---  283 (419)
Q Consensus       210 ~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~---  283 (419)
                      +++  ++++++|.+++.    |..+..+..++.+   +++.|.+|.+ +.+|  +|+++.++        +..+.+.   
T Consensus       162 ~~~~~~~~~~vDa~qs~----g~~pid~~~~giD---~~~~s~~K~l~gP~G--~g~l~vs~--------~~~~~~~~~~  224 (382)
T d2bkwa1         162 KQTSPETFFVVDAVCSI----GCEEFEFDEWGVD---FALTASQKAIGAPAG--LSISLCSS--------RFMDYALNDS  224 (382)
T ss_dssp             HHHCTTSEEEEECTTTT----TTSCCCTTTTTCS---EEEEESSSTTCCCSC--EEEEEECH--------HHHHHHTCHH
T ss_pred             cccccceeeeeeccccc----ccccccccccCee---EEeecccccCcCCCc--hhhhhccH--------HHHhhhhhcc
Confidence            655  599999999987    3344444444444   7888999987 4456  88888865        2222111   


Q ss_pred             --------------------hh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769          284 --------------------DC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP  339 (419)
Q Consensus       284 --------------------~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  339 (419)
                                          ..    ..+.++++....+++..+|+....+..+....+.+++.+.+++.+....++...
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~  304 (382)
T d2bkwa1         225 KNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSV  304 (382)
T ss_dssp             HHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEES
T ss_pred             cCCCcccchhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhccccccc
Confidence                                11    123457777777888888876555667777777778888888888764332211


Q ss_pred             C--CC---CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEE-ee--cCHHHHHHHHHHHHH
Q 014769          340 N--KP---EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIA-FC--AEPSALKDGLGRMKA  410 (419)
Q Consensus       340 ~--~p---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris-~~--~~~~~l~~~l~~l~~  410 (419)
                      .  .+   ..+. +.+.++        +..++.. +|+++||.+.+|.... ..+.|||+ ++  .++++++.+++.|+.
T Consensus       305 ~~~~~~~~s~~v-~~~~~~--------~~~~~~~-~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~  374 (382)
T d2bkwa1         305 SRYPSNMSAHGL-TAVYVA--------DPPDVIA-FLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDL  374 (382)
T ss_dssp             SCSSSTTBCSSC-EEEECS--------CHHHHHH-HHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHH
T ss_pred             ccCchhccCCcE-EEEcCC--------CHHHHHH-HHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHH
Confidence            1  11   1232 234444        4566654 4588999999885532 35789999 55  346777777777765


Q ss_pred             HHHHHh
Q 014769          411 FCQRHT  416 (419)
Q Consensus       411 ~~~~~~  416 (419)
                      +...++
T Consensus       375 i~~~L~  380 (382)
T d2bkwa1         375 IKLALQ  380 (382)
T ss_dssp             HHHHTT
T ss_pred             HHHHHC
Confidence            444443

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.84  E-value=9.3e-19  Score=162.58  Aligned_cols=310  Identities=13%  Similarity=0.077  Sum_probs=203.1

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP  139 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p  139 (419)
                      .++-++++.+.++.+.+. +++  ...++++.+++++.        .+++++++++|+|+..++.++ .++||+|++++.
T Consensus        11 ~~~~~~~~~~~~~~~~~~-~G~--~v~~~E~~la~~~g--------~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~   79 (376)
T d1mdoa_          11 GAEELAAVKTVLDSGWIT-TGP--KNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSM   79 (376)
T ss_dssp             CHHHHHHHHHHHHHTCCS-SSH--HHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHhcCCCc-CCH--HHHHHHHHHHHHHC--------cCeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecc
Confidence            355567888888765432 233  46899999999982        357888999999999999998 789999999999


Q ss_pred             CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      +|......+...|..++.++++++ .+.+|++.|++++++++++|++++   ..|...+   +.+|.++|+++|+++|+|
T Consensus        80 ~~~~~~~ai~~~g~~pv~~d~~~~-~~~~d~~~l~~~i~~~tkaIi~~h---~~G~~~~---~~~i~~i~~~~~i~vIeD  152 (376)
T d1mdoa_          80 TWVSTLNMIVLLGANPVMVDVDRD-TLMVTPEHIEAAITPQTKAIIPVH---YAGAPAD---LDAIYALGERYGIPVIED  152 (376)
T ss_dssp             SCHHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEECCBC---GGGCCCC---HHHHHHHHHHHTCCBCEE
T ss_pred             cccccccchhccccceeeeccccc-ccCCCHHHHHHhcCCCCeEEEEeC---CCCCccc---hhHHHHHHHhcCceEEec
Confidence            999999999999999999998764 568999999999999999888764   5787777   888999999999999999


Q ss_pred             ccccccccCCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc--------
Q 014769          220 EVYGHLTFGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY--------  289 (419)
Q Consensus       220 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~--------  289 (419)
                      .+++.+..-..  ......   +  +.+.||  +|.+.  ....|.+++.++       ++.+.++......        
T Consensus       153 ~a~a~g~~~~~--~~~g~~---g--~~~~Sf~~~K~l~--~g~GG~i~t~~~-------~l~~~~~~~~~~g~~~~~~~~  216 (376)
T d1mdoa_         153 AAHATGTSYKG--RHIGAR---G--TAIFSFHAIKNIT--CAEGGIVVTDNP-------QFADKLRSLKFHGLGVDAWDR  216 (376)
T ss_dssp             CTTCTTCEETT--EETTSS---S--EEEEECCTTSSSC--SSSCEEEEESCH-------HHHHHHHHHTBTTEECC----
T ss_pred             cchhccCeeCC--eecccc---c--CccccCCCcCCCC--CCCCCEEEEech-------hHHHHHHhhcccCCccccccc
Confidence            99987432111  111122   2  223355  57743  333577777652       4555555443211        


Q ss_pred             -----------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eE-EE
Q 014769          290 -----------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG---SM-VT  348 (419)
Q Consensus       290 -----------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~-~~  348 (419)
                                       ...+....+.....|     ..+++..++.++..+.+.+.|++++..........   .+ ..
T Consensus       217 ~~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL-----~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  291 (376)
T d1mdoa_         217 QSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL-----QKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLF  291 (376)
T ss_dssp             -------CCEESSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCE
T ss_pred             ccccccccccchhcccccccchhhhhhhhhhh-----hhhhHHHHHHhhhhhhhhhhccccccccccccccccccccccc
Confidence                             111222222222222     33555666677777888888887654431211111   11 11


Q ss_pred             EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC-----------CC----------CCeEEEEe--ecCHHHHHHHH
Q 014769          349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV-----------GL----------KNWLRIAF--CAEPSALKDGL  405 (419)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~----------~~~~Ris~--~~~~~~l~~~l  405 (419)
                      .+.++....  ..+..++.+.| +++||.+.+....           ..          ...+.|.+  ..+++++++.+
T Consensus       292 ~~~~~~~~~--~~~Rd~l~~~L-~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~  368 (376)
T d1mdoa_         292 IIRVDEARC--GITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVI  368 (376)
T ss_dssp             EEECCHHHH--SSCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHH
T ss_pred             ccccccccc--hhhHHHHHHHH-HHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHH
Confidence            222221110  01234566666 7789987643211           00          34577766  35889999999


Q ss_pred             HHHHHHH
Q 014769          406 GRMKAFC  412 (419)
Q Consensus       406 ~~l~~~~  412 (419)
                      +.|++++
T Consensus       369 ~~i~~i~  375 (376)
T d1mdoa_         369 TALHQIA  375 (376)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999876

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=3.4e-19  Score=167.98  Aligned_cols=365  Identities=13%  Similarity=-0.011  Sum_probs=236.1

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC---cEEEcccHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD---DVYVTLGCK  117 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~---~i~~t~g~~  117 (419)
                      |++..||...-.+     ..+|.+.+.+.+.+..+. ..+...+...++++.+.+++.+.+|.+....   .=.+|+|+|
T Consensus        52 g~~~~n~asf~~t-----~~~~~~~~l~~~~~~~N~-~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgS  125 (450)
T d1pmma_          52 GNARQNLATFCQT-----WDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSS  125 (450)
T ss_dssp             CCGGGBCSCCSCC-----CCCHHHHHHHHHTTTCBT-TCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHH
T ss_pred             CCccccccccccC-----CCCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchH
Confidence            6666677665322     345778888887765432 2333333457899999999999888653222   248999999


Q ss_pred             HHHHHHHHHhcC-----------C-CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEE
Q 014769          118 QAVEVILSVLAR-----------P-GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV  185 (419)
Q Consensus       118 ~al~~~~~~l~~-----------~-gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  185 (419)
                      +|+..++.+...           + ...+++....|.++..+++..|++++.+++++. ++.+|++.|++++++++.+|+
T Consensus       126 eA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~~-~~~~d~~~L~~~i~~~t~~Vv  204 (450)
T d1pmma_         126 EACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPG-QLFMDPKRMIEACDENTIGVV  204 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTT-BCSCCHHHHHHHCCTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecCC-CCcCcHHHHHHHhhhCceEEE
Confidence            999988876532           1 245777888899999999999999999988653 578999999999999999999


Q ss_pred             EeCCCCccccCCCHHHHHHHHH---HHHhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769          186 IINPGNPCGNVFTYHHLQEIAE---MARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR  260 (419)
Q Consensus       186 i~~p~nptG~~~~~~~l~~i~~---~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  260 (419)
                      .+.+++.||.+-|.+++.+|++   .|+++|+++++|.+|+++..  ........  .+...-..+..|.+|. +.....
T Consensus       205 ~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~--~~~~~aDSi~~s~HK~-~~~p~g  281 (450)
T d1pmma_         205 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWD--FRLPRVKSISASGHKF-GLAPLG  281 (450)
T ss_dssp             CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS--TTSTTEEEEEEETTTT-TCCCSS
T ss_pred             eeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhh--hcccceeEeecChhhc-cCCCCC
Confidence            9999999999999776655554   46789999999999987532  21111111  1111123556689998 555566


Q ss_pred             eEEEEeeCCCCccchhhH-HHHHH-hhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769          261 FGWLVTNDPNGIFQKSGI-IDSIK-DCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCI  336 (419)
Q Consensus       261 ~G~~~~~~~~~~~~~~~~-~~~l~-~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  336 (419)
                      +||++.+++..+...... ...+. ....  ..++-+.....++...+.....+.+++..++..++.+++.+.|++.+++
T Consensus       282 ~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~  361 (450)
T d1pmma_         282 CGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPY  361 (450)
T ss_dssp             CEEEEESSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCE
T ss_pred             eeEEEecChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            999999874322100000 00000 0001  1111122222223333333335788899999999999999999998877


Q ss_pred             CCCC--CCCce-EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC---CCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769          337 SCPN--KPEGS-MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV---GLKNWLRIAF--CAEPSALKDGLGRM  408 (419)
Q Consensus       337 ~~~~--~p~~g-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---~~~~~~Ris~--~~~~~~l~~~l~~l  408 (419)
                      +++.  .|..+ ..+.+++.+....+. +..++...| +++|..|......   .....+|+.+  ..+++.++.+++.|
T Consensus       362 el~~~~~p~~~l~~V~Fr~~~~~~~~~-~~~~l~~~L-~~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~d~lv~dl  439 (450)
T d1pmma_         362 EFICTGRPDEGIPAVCFKLKDGEDPGY-TLYDLSERL-RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDY  439 (450)
T ss_dssp             EEEEECCTTTBSSEEEEEECTTCCCSS-CHHHHHHHH-HTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred             EEEeCCCCCCceEEEEEecCCcccCCC-CHHHHHHHH-HHcCCeeeccCcCCCcCCcEEEEEEccCCCCHHHHHHHHHHH
Confidence            6432  22222 234455543222122 345665555 7789766321111   1135799999  46889999999999


Q ss_pred             HHHHHHHhc
Q 014769          409 KAFCQRHTK  417 (419)
Q Consensus       409 ~~~~~~~~~  417 (419)
                      +++++++.+
T Consensus       440 ~~~v~~l~~  448 (450)
T d1pmma_         440 KASLKYLSD  448 (450)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998865

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.5e-19  Score=164.52  Aligned_cols=337  Identities=13%  Similarity=0.067  Sum_probs=218.1

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      .+|+.+|||..|..+.. .-.-+|++.+++.++++...... +....-...+.+.+++..        ..+.++++++++
T Consensus        38 ~dG~~ylD~~~g~~~~~-lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~sGs  108 (404)
T d2byla1          38 VEGRKYFDFLSSISAVN-QGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLF--------NYHKVLPMNTGV  108 (404)
T ss_dssp             TTCCEEEESSHHHHTCT-TCBTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred             CCCCEEEEecCCHHHHh-hcCCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcc--------cccccccccCcc
Confidence            45889999998843321 12357899999999998654221 112222234455555543        447899999999


Q ss_pred             HHHHHHHHHhcC----------CCCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCcccChHHHH
Q 014769          118 QAVEVILSVLAR----------PGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEVDLDAVE  174 (419)
Q Consensus       118 ~al~~~~~~l~~----------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~  174 (419)
                      +|+..+++....          ....++...-+|++..........             .+..++       -.|+++++
T Consensus       109 eA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p-------~~d~~~l~  181 (404)
T d2byla1         109 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP-------YNDLPALE  181 (404)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEEC-------TTCHHHHH
T ss_pred             ccchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEec-------ccCHHHHH
Confidence            999999987631          235777778888764333222211             111222       13788899


Q ss_pred             HhhcCCccEEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769          175 ALADKNTAAMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK  252 (419)
Q Consensus       175 ~~~~~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  252 (419)
                      +.+.++..+.++..| ....| ...+++++++|.++|+++|+++|+||++.+|...|..+ ....++-.+.++   +++|
T Consensus       182 ~~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-a~~~~gv~PDi~---~~gK  257 (404)
T d2byla1         182 RALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLGK  257 (404)
T ss_dssp             HHHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECG
T ss_pred             HhcCCCCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccc-hhhhcCCCCCEE---EECc
Confidence            988766666677788 44456 46789999999999999999999999999876655433 233333333334   6789


Q ss_pred             cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769          253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      .++..++++|.+++++        ++.+.+.... ..+++.++++..++.+.|+...++.   ..++.++..+++.+.|.
T Consensus       258 ~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~l~  326 (404)
T d2byla1         258 ALSGGLYPVSAVLCDD--------DIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEEN---LAENADKLGIILRNELM  326 (404)
T ss_dssp             GGGTTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHH
T ss_pred             hhhCCCccceeeeech--------hhhhccCCCCCCcCCCcCHHHHHHHHHHHHHHHhcC---chhhhhHhhHHHHHHHH
Confidence            9654448999999865        4555554433 2356778888888888887643322   34455556666777777


Q ss_pred             cCCCCCCCCC-CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769          332 EIPCISCPNK-PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM  408 (419)
Q Consensus       332 ~~~~~~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l  408 (419)
                      ++.. ..+.. ...|++.-+.+.+..   ......+..++ .++||++.+..    .+.+|+++  ..++++|++++++|
T Consensus       327 ~l~~-~~i~~vRg~Gl~~~i~~~~~~---~~~~~~~~~~l-~~~Gvl~~~~~----~~~i~l~PpL~it~~~id~~~~~l  397 (404)
T d2byla1         327 KLPS-DVVTAVRGKGLLNAIVIKETK---DWDAWKVCLRL-RDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEII  397 (404)
T ss_dssp             TSCT-TTEEEEEEETTEEEEEECCCS---SCCHHHHHHHH-HHTTEECEEEE----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             hhcc-ccceeeeecccEEEEEEecCC---chhHHHHHHHH-HhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHH
Confidence            6521 11111 123444445554321   12456677777 56799987642    46899997  46899999999999


Q ss_pred             HHHHHHH
Q 014769          409 KAFCQRH  415 (419)
Q Consensus       409 ~~~~~~~  415 (419)
                      ++++.++
T Consensus       398 ~~al~~f  404 (404)
T d2byla1         398 NKTILSF  404 (404)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHcC
Confidence            9999764

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.84  E-value=5.8e-19  Score=164.72  Aligned_cols=322  Identities=13%  Similarity=0.116  Sum_probs=206.0

Q ss_pred             CChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769           59 RTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVL  135 (419)
Q Consensus        59 ~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vl  135 (419)
                      ..++.|++||.    ....+.++.  ..-+.++|+.+++++      +++. +.|+++.|+|++++.++..+..+|++++
T Consensus        27 ~~~~~V~~Am~----~~~~~hr~~ef~~i~~~~r~~L~~ll------~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl   96 (388)
T d2ch1a1          27 NCSKRVLTAMT----NTVLSNFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRVL   96 (388)
T ss_dssp             CCCHHHHHHTT----SCCCCTTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCHHHHHHhC----cCCCCCCCHHHHHHHHHHHHHHHHHh------CCCCCeEEEEcCcHHHHHHHHHHHhcccccccc
Confidence            46788877753    322334443  223356666666666      3333 4567788999999999999999999999


Q ss_pred             eeCCCCCCcH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhh-cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769          136 LPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL  212 (419)
Q Consensus       136 v~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  212 (419)
                      +..-.+++..  ..++..+.....+...+.  ...+.+..+... ..+++.+++++.+|.||...+   ++++.++|+++
T Consensus        97 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~---~~~i~~~~~~~  171 (388)
T d2ch1a1          97 IAVNGIWAERAVEMSERYGADVRTIEGPPD--RPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQH  171 (388)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCTT--SCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred             ccccccccccchhhhhhhcccccccccccc--cccchhhhhhhhccCCcceeeeeecccccccccc---hhhhcchhccc
Confidence            9887776543  445667777777765443  345655555544 347889999999999999999   88889999999


Q ss_pred             CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh--------
Q 014769          213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD--------  284 (419)
Q Consensus       213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~--------  284 (419)
                      +.++++|.+++...    .+..+..++.   .+++.|-.|.++.+ ..+|+++.+.        ...+.+..        
T Consensus       172 ~~~~~vD~~ss~g~----~pid~~~~~~---d~~~~s~~K~~~gp-~G~g~~~~~~--------~~~~~~~~~~~~~~~~  235 (388)
T d2ch1a1         172 DCLLIVDAVASLCG----VPFYMDKWEI---DAVYTGAQKVLGAP-PGITPISISP--------KALDVIRNRRTKSKVF  235 (388)
T ss_dssp             TCEEEEECTTTBTT----BCCCTTTTTC---CEEECCCC-CCCCC-SSCEEEEECH--------HHHHHHHTCSSCCSCG
T ss_pred             cceeeeeeeecccc----cccchhccCc---eEEEEccccccCCC-CeEEEEeccH--------HHHHhhhcccCccccc
Confidence            99999999998732    3333444443   47888889975332 2366666643        12222211        


Q ss_pred             ----------h------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceE
Q 014769          285 ----------C------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP--EGSM  346 (419)
Q Consensus       285 ----------~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~  346 (419)
                                .      ..+..+++.....++..++.............+.+.........+........+..+  ....
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~  315 (388)
T d2ch1a1         236 YWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPT  315 (388)
T ss_dssp             GGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTT
T ss_pred             cccchhhhhhhcccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhcccccccCCHHHhCCe
Confidence                      0      012344555555565555554322334444444444444455555443111111122  1222


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEE-ee--cCHHHHHHHHHHHHHHHHHHh
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA-FC--AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris-~~--~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .+.+.+|+.     .+..++...|++++||.+.+|......+.|||+ ++  .++|+|+.+++.|+++++...
T Consensus       316 v~~~~~p~g-----~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~~  383 (388)
T d2ch1a1         316 VTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH  383 (388)
T ss_dssp             EEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEECCCC-----CCHHHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHhhC
Confidence            445667642     257788888888899999998766567899999 55  368999999999999998753

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.83  E-value=5.7e-18  Score=155.04  Aligned_cols=281  Identities=17%  Similarity=0.158  Sum_probs=193.5

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEecc
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLL  161 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~  161 (419)
                      ...|++.|++.-        ..+..+++++|++|+..++.+++.+||.|++.+..|.+..    ..+...|+.+.+++. 
T Consensus        61 ~~~le~~la~LE--------g~~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~-  131 (394)
T d1e5ea_          61 VSNLEGKIAFLE--------KTEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINT-  131 (394)
T ss_dssp             HHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-
T ss_pred             HHHHHHHHHHHh--------CCcceeeeccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeeccCC-
Confidence            456777777765        3467899999999999999999999999999999997643    445677888888763 


Q ss_pred             CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHH-hCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR-KLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                            .|.+.+++++++++++|++..|.||+..+.+   ++++++.+. ++++++|+|..+..-..    ..++ .++.
T Consensus       132 ------~d~~~~~~~i~~~t~lv~~Etp~NP~l~v~D---i~~~~~~~~~~~g~~vvvDnT~atP~~----~~Pl-~~Ga  197 (394)
T d1e5ea_         132 ------AIPGEVKKHMKPNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMI----TNPV-DFGV  197 (394)
T ss_dssp             ------TSTTHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTT----CCGG-GGTC
T ss_pred             ------CCHHHHHHhhcccccEEEEeccCCcceeeeh---hhhhhhccccccCeEEEecCcccCccc----CCch-hcCC
Confidence                  2667899999999999999999999999999   778887665 46899999999875221    1122 3444


Q ss_pred             CCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh--hhc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          241 IVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD--CLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~--~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                      +   |++.|++|.++..+ .-.|.+++++        +.....+.  ... .....++...+.+..-|+.     +.-+.
T Consensus       198 D---iVvhS~TKy~~GhsDv~~G~v~~~~--------~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~T-----L~lRm  261 (394)
T d1e5ea_         198 D---VVVHSATKYINGHTDVVAGLICGKA--------DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRM  261 (394)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEECH--------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             C---EEEechhhhcCCCcccccccccchh--------hHHHHHHHHHHHHhhCCCCChHHHHHHHhhchh-----HHHHH
Confidence            4   99999999977665 4456666543        34444332  222 2445666666666666654     66677


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCC-----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769          317 DTLRESAEICYDGVKEIPCISCPNKP-----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT  379 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~~p-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  379 (419)
                      ++..++...+.+.|+++|.++.|..|                 .+|++.+ .+.        +..+.+.++++.-.+. .
T Consensus       262 ~r~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf-~~~--------~~~~~a~~f~~~l~l~-~  331 (394)
T d1e5ea_         262 KAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILK--------SGFEGAKKLLDNLKLI-T  331 (394)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EET--------THHHHHHHHHHTCSSS-E
T ss_pred             HHHHHHHHHHHHHHhhcCCccEEeCCCcccccchhhhhcccccCCCeeee-ecc--------CCHHHHHHHHHhCCcc-c
Confidence            78888999999999988765434333                 2454443 343        2333344444443432 2


Q ss_pred             cCCCCCC---------------------------CCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769          380 PGIYVGL---------------------------KNWLRIAFCAEPSALKDGLGRMKAFCQRHTK  417 (419)
Q Consensus       380 ~g~~~~~---------------------------~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~  417 (419)
                      .+..+|.                           ++.||||+|.  |+.+.+++.|+++++.+.|
T Consensus       332 ~a~SlGg~eSLi~~p~~~th~~~~~~~r~~~Gi~~~liRlSVGl--Ed~eDLi~Dl~qAl~~l~~  394 (394)
T d1e5ea_         332 LAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQGLDALLR  394 (394)
T ss_dssp             ESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHHC
T ss_pred             eeeccCCccceeECccccccccCCHHHHHhcCCCcCEEEEEecc--CCHHHHHHHHHHHHHHhhC
Confidence            2332321                           3579999997  4666777777777776643

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=6.5e-18  Score=154.51  Aligned_cols=219  Identities=14%  Similarity=0.139  Sum_probs=158.7

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~  160 (419)
                      ....|++.+++.-        +.+..+++++|++|+..++.+++++||.|++....|.+....    +...|+.+..+..
T Consensus        59 t~~~le~~la~LE--------g~~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~  130 (391)
T d1cl1a_          59 THFSLQQAMCELE--------GGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP  130 (391)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred             hHHHHHHHHHHHh--------CCccEEEeccccceeeehhhcccCCCCeEEEecccccchhhhhhhcccccccccccccC
Confidence            3457777777765        346899999999999999999999999999999999875444    4556777777642


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCcccc
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLF  238 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~  238 (419)
                             .|.+.+++++++++++|++.+|.||+..+.+   +++++++|++  +|+++|+|..+.....    ..++ .+
T Consensus       131 -------~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~~----~~Pl-~~  195 (391)
T d1cl1a_         131 -------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL----FKAL-DF  195 (391)
T ss_dssp             -------TCGGGGGGTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS----SCGG-GG
T ss_pred             -------ccccccccccccccceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchhh----hccc-cc
Confidence                   2678888999999999999999999999999   7788888765  5999999999975321    1222 33


Q ss_pred             CCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769          239 GSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLI  316 (419)
Q Consensus       239 ~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  316 (419)
                      +.+   |++.|++|.++..|-- .|.++.+.        ++...+.... ......++...+.+..-++.     +.-+.
T Consensus       196 GaD---ivvhS~TKy~~GhsdvlgG~vv~~~--------~~~~~~~~~~~~~G~~~~p~~a~ll~rgl~T-----L~lR~  259 (391)
T d1cl1a_         196 GID---VSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYITSRGLRT-----LGVRL  259 (391)
T ss_dssp             TCS---EEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             ccc---eEEeecchhccccccccccceeccc--------cccccchhhhhcccccCCchhhhhhhccchh-----HHHHH
Confidence            444   8999999997766543 45555433        2334444333 23445566666665555554     66667


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          317 DTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       317 ~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ++..++...+.+.|+++|.+..+..|
T Consensus       260 ~~~~~nA~~vA~~L~~hp~V~~V~yP  285 (391)
T d1cl1a_         260 RQHHESSLKVAEWLAEHPQVARVNHP  285 (391)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHHHhcccccccccc
Confidence            77888888999999987765544333

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=4.1e-18  Score=156.60  Aligned_cols=228  Identities=19%  Similarity=0.166  Sum_probs=159.4

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEec
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~  160 (419)
                      ....|++.|+++-        ..+..+++++|++|+..++.+++++||.|++....|.+...    .+...|+.+.++..
T Consensus        59 T~~~LE~~la~LE--------~~~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~  130 (421)
T d2ctza1          59 TVDVLEKRLAALE--------GGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR  130 (421)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred             HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceeccc
Confidence            4467788888775        34678899999999999999999999999999999987544    44667888877642


Q ss_pred             cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769          161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS  240 (419)
Q Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  240 (419)
                      .      -..+..+..+++++++|++.+|.|||..+.+   +++|+++|+++|+++|+|..++..   +-...|+ .++.
T Consensus       131 ~------~~~~~~~~~~~~~t~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vvDnT~a~t---P~~~~Pl-~~Ga  197 (421)
T d2ctza1         131 E------ERPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMG---GYLLRPL-AWGA  197 (421)
T ss_dssp             T------CCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGG---GTSCCGG-GGTC
T ss_pred             c------cCcchhccccCCCceEEEEcCCCcceeEecc---hHHHHHHHHhcCCceEeccccccc---ceecccc-ccCC
Confidence            1      1345666777889999999999999999999   999999999999999999998631   0011122 3444


Q ss_pred             CCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccc------------------------hhhHHHHHHhh--hccccCCc
Q 014769          241 IVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQ------------------------KSGIIDSIKDC--LSIYSDIP  293 (419)
Q Consensus       241 ~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~------------------------~~~~~~~l~~~--~~~~~~~~  293 (419)
                      +   |++.|++|.++..|--+ |.++..+ +..+.                        +..++.+.+..  .......+
T Consensus       198 D---iVvhS~TKyl~GHsD~l~G~vv~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~s  273 (421)
T d2ctza1         198 A---LVTHSLTKWVGGHGAVIAGAIVDGG-NFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALG  273 (421)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEECS-CSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCC
T ss_pred             c---EEEEechhhccCCCCeEEEEEEcCC-cchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCC
Confidence            4   99999999987766544 5555433 21110                        00112222111  12345566


Q ss_pred             hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          294 TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       294 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      +...+.+..-|+.     +.-+.++..++...+.+.|+++|.+..|..|
T Consensus       274 P~~a~l~~rgl~T-----L~lRm~~~~~nA~~vA~~L~~hp~V~~V~yP  317 (421)
T d2ctza1         274 PFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYP  317 (421)
T ss_dssp             HHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHhcCCcc-----hhhHHHHHHHHHHHHHhhhccCCCeeEEecC
Confidence            6666666666654     6666777788888999999987765434333

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1e-18  Score=164.21  Aligned_cols=357  Identities=13%  Similarity=0.076  Sum_probs=214.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..|..+.. .-.-+|.+.+++.+++.........  ....+.+..+++.+.+..+ +-..+.+++++++++
T Consensus        37 ~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse  112 (425)
T d1sffa_          37 VEGREYLDFAGGIAVLN-TGHLHPKVVAAVEAQLKKLSHTCFQ--VLAYEPYLELCEIMNQKVP-GDFAKKTLLVTTGSE  112 (425)
T ss_dssp             TTCCEEEESSHHHHTCT-TCBTCHHHHHHHHHHTTTCSCCCTT--TEECHHHHHHHHHHHHHSS-CSSCEEEEEESSHHH
T ss_pred             CCCCEEEEcCcCHHhhc-ccCCcHHHHHHHHHHHhhcCCcccc--cccCcHHHHHHHHHHhhhh-hcccceeeeeccccc
Confidence            45899999999843321 1125799999999998764321111  1123444555666555332 112357999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC--------------EEEEEecc--CCCCcccC----hHHHHH-
Q 014769          119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLL--PERNWEVD----LDAVEA-  175 (419)
Q Consensus       119 al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~--~~~~~~~~----~~~l~~-  175 (419)
                      |.+.+++....  .-.+|+....+|++....+.....              .....+.+  ........    .+.+.. 
T Consensus       113 A~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (425)
T d1sffa_         113 AVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN  192 (425)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHh
Confidence            99999887643  237789999999986554433211              11111111  00000000    111111 


Q ss_pred             hhcCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc
Q 014769          176 LADKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR  253 (419)
Q Consensus       176 ~~~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  253 (419)
                      ....+..+.++..| +...|. ..++++++.|.++|+++|+++|+||++.++...|..+ ....++-.+.++   +++|.
T Consensus       193 ~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~-a~~~~gv~PDi~---~~gK~  268 (425)
T d1sffa_         193 DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVAPDLT---TFAKS  268 (425)
T ss_dssp             TCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSCCSEE---EECGG
T ss_pred             cccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhh-HHHhcCCCccce---ecccc
Confidence            11223456677777 333554 6799999999999999999999999999865555432 223333333334   57899


Q ss_pred             CCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhh
Q 014769          254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVK  331 (419)
Q Consensus       254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~  331 (419)
                      + ..|+++|.+++++        ++.+.+.... ..+++.++++..++.+.|+...+ +..+.....-....+.+.+.++
T Consensus       269 l-~gG~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~  339 (425)
T d1sffa_         269 I-AGGFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAE  339 (425)
T ss_dssp             G-GTSSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCcceEEEEEcH--------HHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHh
Confidence            6 5589999999976        4555554432 34677888888888888876443 2333333333344444555555


Q ss_pred             cCCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHH
Q 014769          332 EIPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLG  406 (419)
Q Consensus       332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~  406 (419)
                      +.+.+..+  ...|.+..+.+.........+   ...+..++ .++||++.++...  .+.+|+++  ..++++|+++++
T Consensus       340 ~~~~v~~v--rg~Gl~~~i~f~~~~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~g~~--~n~i~~~PpL~it~~eid~~l~  414 (425)
T d1sffa_         340 KHPEIGDV--RGLGAMIAIELFEDGDHNKPDAKLTAEIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLE  414 (425)
T ss_dssp             TCTTEEEE--EEETTEEEEEEBGGGCTTSBCHHHHHHHHHHH-HHTTEECEEESTT--SCEEEECCCTTCCHHHHHHHHH
T ss_pred             hCCceEEE--EccccEEEEEEeccCccCCccHHHHHHHHHHH-HHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHHHH
Confidence            55432212  233444455553221111112   23455555 5679998875432  46789997  469999999999


Q ss_pred             HHHHHHHHHhc
Q 014769          407 RMKAFCQRHTK  417 (419)
Q Consensus       407 ~l~~~~~~~~~  417 (419)
                      ++++++++..+
T Consensus       415 ~l~~al~eikk  425 (425)
T d1sffa_         415 IISQCFDEAKQ  425 (425)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhcC
Confidence            99999998753

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1.9e-18  Score=161.95  Aligned_cols=348  Identities=12%  Similarity=0.014  Sum_probs=214.4

Q ss_pred             hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ...+|+.+|||..|.-... .-.-+|.+.+++.+++.......+.. ... +-...+++.+....  +...+.+++++++
T Consensus        38 ~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~-~~~-~~~~~l~~~l~~~~--~~~~~~v~f~~sG  112 (429)
T d1s0aa_          38 ILSDGRRLVDGMSSWWAAI-HGYNHPQLNAAMKSQIDAMSHVMFGG-ITH-APAIELCRKLVAMT--PQPLECVFLADSG  112 (429)
T ss_dssp             EETTSCEEEESSTTTTTCT-TCBSCHHHHHHHHHHHHHCSCCCCSS-EEC-HHHHHHHHHHHHHS--CTTCCEEEEESSH
T ss_pred             EECCCCEEEECcccHHHHh-hcCCcHHHHHHHHHHHHhcCCcccCC-ccc-hHHHHHHHHHHhhh--ccCcceeeecccc
Confidence            3446899999988854322 12258999999999987643211111 111 22233333333322  3345789999999


Q ss_pred             HHHHHHHHHHhcC-------CCCeEEeeCCCCCCcHHHHhhcC--------------CEEEEEeccCC-CCc---ccChH
Q 014769          117 KQAVEVILSVLAR-------PGANVLLPRPGWPYYEGIAQRKQ--------------VEVRHFDLLPE-RNW---EVDLD  171 (419)
Q Consensus       117 ~~al~~~~~~l~~-------~gd~vlv~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~-~~~---~~~~~  171 (419)
                      ++|++.+++....       +..+|+....+|++....+....              ......+.... ...   .-+++
T Consensus       113 seA~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (429)
T d1s0aa_         113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV  192 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred             ccchhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhh
Confidence            9999999877642       33689999999987533222221              01111221111 111   12344


Q ss_pred             HHHHhhc--CCccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769          172 AVEALAD--KNTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT  246 (419)
Q Consensus       172 ~l~~~~~--~~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (419)
                      .+++.+.  .+..+.++..|  ++-.|. ..|++.+++|.++|+++|+++|.||++.++...|..+ ....++..+.++ 
T Consensus       193 ~~~~~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-~~~~~~v~PDi~-  270 (429)
T d1s0aa_         193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL-  270 (429)
T ss_dssp             HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE-
T ss_pred             hhhhhhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccccccccccc-ccccceeccccc-
Confidence            4444332  24556677777  354554 5789999999999999999999999999986655432 333344333444 


Q ss_pred             EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHH
Q 014769          247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLR  320 (419)
Q Consensus       247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  320 (419)
                        +++|.++..+.++|.+++++        ++.+.+....      ..+++.++++..++.+.|+....+.   ..++++
T Consensus       271 --~~gK~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~~~---~~~~~~  337 (429)
T d1s0aa_         271 --CLGKALTGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGD---WQQQVA  337 (429)
T ss_dssp             --EECGGGGTSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCH---HHHHHH
T ss_pred             --ccccccccccccccchhhHH--------HHHhccCCCCCcceeecCCCCCCcccchhhhcccccccccc---ccchhh
Confidence              46799666668999999875        5777665421      2356778888888888887643332   334455


Q ss_pred             HHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecC
Q 014769          321 ESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAE  397 (419)
Q Consensus       321 ~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~  397 (419)
                      +..+++.+.|+++.....+. ...-|++..+.+...     .....+...+ .++|+++.|.     .+.+|+++  ..+
T Consensus       338 ~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~~e~~~~-----~~~~~~~~~~-~~~Gl~~~~~-----g~~i~~~Ppl~it  406 (429)
T d1s0aa_         338 DIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHP-----VNMAALQKFF-VEQGVWIRPF-----GKLIYLMPPYIIL  406 (429)
T ss_dssp             HHHHHHHHHHGGGGGCTTEEEEEEETTEEEEEESSC-----BCHHHHHHHH-HHTTEECCCB-----TTEEEECCCTTCC
T ss_pred             HHHHHHHHHHHHhccCCceEEEeecccEEEEEecCc-----ccHHHHHHHH-HHCCcEEEec-----CCEEEEeCCcCCC
Confidence            55556666665431111111 122355655666532     1355666555 5679998774     36899997  469


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 014769          398 PSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       398 ~~~l~~~l~~l~~~~~~~  415 (419)
                      +++|++++++|++++++.
T Consensus       407 ~~eid~~~~~l~~al~e~  424 (429)
T d1s0aa_         407 PQQLQRLTAAVNRAVQDE  424 (429)
T ss_dssp             HHHHHHHHHHHHHHTSSG
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999998764

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.82  E-value=5.3e-18  Score=152.11  Aligned_cols=216  Identities=17%  Similarity=0.146  Sum_probs=159.0

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCC
Q 014769           88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPE  163 (419)
Q Consensus        88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~  163 (419)
                      .|++.+|++-        +.+..+++++|++|+..++.+++++||.|++..+.|.+..    ..+...|+++.+++.   
T Consensus         2 aLE~~la~Le--------g~~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~---   70 (331)
T d1pffa_           2 ALEGKIAKLE--------HAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             HHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecc---
Confidence            5788888886        3567899999999999999999999999999999997643    445678999888753   


Q ss_pred             CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHH-HhCCCeEEEcccccccccCCCCCCCccccCCCC
Q 014769          164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA-RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV  242 (419)
Q Consensus       164 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  242 (419)
                          .|.+.++.+++++++.|++.+|.||+..+.+   ++++++++ +++++++|+|..+.....-    .++ .++.+ 
T Consensus        71 ----~d~~~~~~~i~~~t~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~~----~pl-~~GaD-  137 (331)
T d1pffa_          71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-DLGVD-  137 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-GGTCS-
T ss_pred             ----cchhhHhhhcccccceeeeeccccccccccc---chhhhhhhhcccCceEEeeccccccccc----ccc-ccCCC-
Confidence                2778899999999999999999999999999   77777775 5689999999999753321    122 33333 


Q ss_pred             cEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHh--hhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          243 PVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKD--CLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~--~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                        |++.|++|.++..|-- .|.++++.        +.....+.  .... ....++...+.+..-++.     +..+.++
T Consensus       138 --iVv~S~TKy~~Gh~d~~~G~v~~~~--------~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----l~~Rm~~  202 (331)
T d1pffa_         138 --IVVHSATKYINGHTDVVAGLVCSRA--------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKR  202 (331)
T ss_dssp             --EEEEETTTTTSSSSSCCCEEEEECH--------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHH
T ss_pred             --EEEecchhhcCCCCccccccccccc--------cchhhhhhhhhhhccCCCCCHHHHHHHHHHHHH-----HHHHHHH
Confidence              8999999997765544 45555543        23333322  2222 344565555555554443     6667778


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCC
Q 014769          319 LRESAEICYDGVKEIPCISCPNKP  342 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~~~~~~~~~p  342 (419)
                      ..++...+.+.|+++|.+..|..|
T Consensus       203 ~~~nA~~lA~~L~~hp~V~~V~yP  226 (331)
T d1pffa_         203 AAENAQKVAEFLHEHKAVKKVYYP  226 (331)
T ss_dssp             HHHHHHHHHHHHHHCTTCCCEECT
T ss_pred             HHHHHHHHHHhhhhCCcEEeeccc
Confidence            888899999999988777655554

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.82  E-value=8.2e-19  Score=165.78  Aligned_cols=340  Identities=13%  Similarity=0.081  Sum_probs=211.2

Q ss_pred             CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769           41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV  120 (419)
Q Consensus        41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al  120 (419)
                      ..-+|||-.-..+    .+..+..    ..++.-++ ..|+..+...+|++.+++++        +.+.++++++|+.|+
T Consensus        41 ~~v~iDl~sDs~t----~am~~~~----~aa~~~GD-d~Y~~dpt~~~lE~~~a~l~--------G~e~al~~~SGt~An  103 (456)
T d1c7ga_          41 KDIYIDLLTDSGT----NAMSDKQ----WAGMMIGD-EAYAGSENFYHLEKTVKELF--------GFKHIVPTHQGRGAE  103 (456)
T ss_dssp             GGCSEECSCSSSC----CCEEHHH----HHHTTSCC-CCSSSCHHHHHHHHHHHHHH--------CCSEEEEESSHHHHH
T ss_pred             cceeeEcccCCCc----ccchHHH----HHHHhccc-hhccCCchHHHHHHHHHHHh--------CCCeEEECCCHHHHH
Confidence            4457787765533    1223333    33333333 26888788899999999998        456889999999999


Q ss_pred             HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC--------CCCcccChHHHHHhhcCC----ccEEEEeC
Q 014769          121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP--------ERNWEVDLDAVEALADKN----TAAMVIIN  188 (419)
Q Consensus       121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~----~~~v~i~~  188 (419)
                      .+++++++++||.|+.... +..........|..+..+..+.        ...+.+|++.|++.+++.    ...+++.+
T Consensus       104 ~~a~~~l~~~Gd~Vi~~~~-f~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~  182 (456)
T d1c7ga_         104 NLLSQLAIKPGQYVAGNMY-FTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAV  182 (456)
T ss_dssp             HHHHHHHCCTTEEEEESSC-CHHHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEES
T ss_pred             HHHHHHhcCCCCeEecCcc-hHHHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeee
Confidence            9999999999999886654 3333344556677766554321        123568999999988653    34678889


Q ss_pred             CCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEcccccccc--cC---CCC--CCCccc----cCCCCcEEEEecCCCcCCC
Q 014769          189 PGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT--FG---SIP--YTPMGL----FGSIVPVITLGSISKRWLV  256 (419)
Q Consensus       189 p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~---~~~--~~~~~~----~~~~~~~i~~~s~sK~~~~  256 (419)
                      |+|+. |++++.+++++|.++|++||+.+++|+++....  +.   ...  ..++..    ...... ++..|++|.++.
T Consensus       183 ~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad-~~s~s~~K~~~~  261 (456)
T d1c7ga_         183 TVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYAD-GCTMSGKKDCLV  261 (456)
T ss_dssp             SBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTCC
T ss_pred             cccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccc-cEEEeccccccc
Confidence            98875 688999999999999999999999999975321  00   000  011110    000111 555689999655


Q ss_pred             CCceeEEEEeeCCCCccchhhHHHHHHhhhc------cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769          257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS------IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG  329 (419)
Q Consensus       257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~  329 (419)
                      ++  .|++++++       .++.++.+....      ..+..+.....++...+.+.. .++++    +..++.+++.+.
T Consensus       262 ~~--GG~i~~~~-------~~l~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~~~~l~----~r~~~~~~L~e~  328 (456)
T d1c7ga_         262 NI--GGFLCMND-------EEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIE----HRVKQVRYLGDK  328 (456)
T ss_dssp             SS--CEEEEESC-------HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTCHHHHH----HHHHHHHHHHHH
T ss_pred             cc--eeEEEcCC-------HHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcCHHHHH----HHHHHHHHHHHH
Confidence            43  37777654       245565554321      112233333333333333311 23333    334455677777


Q ss_pred             hhcCCCCCCCCCCCceEEEEeecCccc---ccCCCCHHHHHHHHHHhcCeEeecCCCC-------------CCCCeEEEE
Q 014769          330 VKEIPCISCPNKPEGSMVTMVKLNPWL---LEDINDDIEFALKLAKEESVIVTPGIYV-------------GLKNWLRIA  393 (419)
Q Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~v~~g~~~-------------~~~~~~Ris  393 (419)
                      |.+. ++. +..|.++...++......   ........++..+++.+.||...+...+             .....+|++
T Consensus       329 L~~~-g~~-vv~p~g~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLa  406 (456)
T d1c7ga_         329 LREA-GVP-IVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLT  406 (456)
T ss_dssp             HHHT-TCC-BCSSCCSSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEE
T ss_pred             HHhc-cCC-cccCCCCcceeEechhhccCCCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEe
Confidence            7776 666 336777776665432110   0001134567778888889976543221             112469999


Q ss_pred             ee---cCHHHHHHHHHHHHHHHHH
Q 014769          394 FC---AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       394 ~~---~~~~~l~~~l~~l~~~~~~  414 (419)
                      +.   .++++|+.+++.|+++.++
T Consensus       407 ip~~~~T~e~iD~Vae~i~~v~~~  430 (456)
T d1c7ga_         407 IPRRVYTYAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHHHTT
T ss_pred             cCcccCCHHHHHHHHHHHHHHHhh
Confidence            84   3889999999999988754

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=2.7e-18  Score=158.83  Aligned_cols=332  Identities=15%  Similarity=0.126  Sum_probs=215.8

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..|.-+.. .-.-+|++.+++.++++......+   .-..+.+..+++.+.....  ...+.+++++++++
T Consensus        34 ~dG~~ylD~~~g~~~~~-lGh~hp~v~~a~~~~~~~~~~~~~---~~~~~~~~~la~~l~~~~~--~~~~~v~f~~sGse  107 (387)
T d1vefa1          34 AEGNEYIDCVGGYGVAN-LGHGNPEVVEAVKRQAETLMAMPQ---TLPTPMRGEFYRTLTAILP--PELNRVFPVNSGTE  107 (387)
T ss_dssp             TTSCEEEESSHHHHTCT-TCBTCHHHHHHHHHHHHHCCCCCT---TSCCHHHHHHHHHHHHTSC--TTEEEEEEESSHHH
T ss_pred             CCCCEEEEcchhHHhhh-hcCCcHHHHHHHHHHHHhhccccc---ccCCchHHHHHHHhhhhcc--ccceeeccccCchH
Confidence            45899999988633221 112579999999999876432111   1123566666666654322  23357999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       119 al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      |++.+++....  ....|+....+|++....+.....             ++..+|.       .|++.|++.+.++. +
T Consensus       108 A~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~~~~~~i-A  179 (387)
T d1vefa1         108 ANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEET-A  179 (387)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTTE-E
T ss_pred             HHHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-------CCHHHHHHhcCCCe-E
Confidence            99999988642  337888999999876443333221             1222221       26889999887654 4


Q ss_pred             EEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee
Q 014769          184 MVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF  261 (419)
Q Consensus       184 v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  261 (419)
                      .+|..| ....|. ..++++++++.++|+++|+++|.||++.++...|..+ ....++..+.++   +++|.+ ..|..+
T Consensus       180 avi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-~~~~~~v~PDi~---~~gK~l-~gG~~~  254 (387)
T d1vefa1         180 AVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKAL-GGGVPL  254 (387)
T ss_dssp             EEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGG-GTTSSC
T ss_pred             EEEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCc-ccccCCcCCcee---eecccC-CCCccc
Confidence            456677 444565 5889999999999999999999999999886555432 222333333344   467995 567888


Q ss_pred             EEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014769          262 GWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN  340 (419)
Q Consensus       262 G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  340 (419)
                      +.++...        ++.+.+.... ..+++.++++..++.+.|+....   ....+++++..+++.+.|+++.. ..+.
T Consensus       255 ~~~~~~~--------~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~---~~~~~~v~~~g~~l~~~L~~l~~-~~v~  322 (387)
T d1vefa1         255 GVAVMRE--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIR  322 (387)
T ss_dssp             EEEEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEE
T ss_pred             cccccce--------eeeeccccCCccccCCCCcchhhhcccchhhccc---ccccchHhhhhHHHHHHHHhcCC-CceE
Confidence            8888765        4555444332 34567788988888888876322   23345566667777788876521 1121


Q ss_pred             C-CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769          341 K-PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC  412 (419)
Q Consensus       341 ~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~  412 (419)
                      . ..-|++..+.++.       +....+.+++.+.|+.+.+..    .+.+|+++  ..++++|++++++|++++
T Consensus       323 ~vrg~Gl~~~ie~~~-------~~~~~~~~~~~~~g~l~~~~g----~~~ir~~Ppl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         323 EVRGMGLMVGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             EEEEETTEEEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEeecceEEEEEEeC-------CchHHHHHHHHHCCCeEEecC----CCEEEEECCccCCHHHHHHHHHHHHHHh
Confidence            1 1235555666654       223344555567788877643    46789987  469999999999999886

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.82  E-value=1.7e-18  Score=161.40  Aligned_cols=345  Identities=14%  Similarity=0.085  Sum_probs=208.7

Q ss_pred             CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769           39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ  118 (419)
Q Consensus        39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~  118 (419)
                      .+|+.+|||..|..+... -.-+|.+.+++.+++.+...   ..........+..++.+...    ...+.+.++.++++
T Consensus        36 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~sgs~  107 (404)
T d1z7da1          36 VNDKRYYDFLSAYSSVNQ-GHCHPNILNAMINQAKNLTI---CSRAFFSVPLGICERYLTNL----LGYDKVLMMNTGAE  107 (404)
T ss_dssp             TTCCEEEESSHHHHTTTT-CBTCHHHHHHHHHHHTTCSC---CCTTSEEHHHHHHHHHHHHH----HTCSEEEEESSHHH
T ss_pred             CCCCEEEEccccHHHHhh-hcCcHHHHHHHHHHHHhCCC---cccccchHHHHHHHHhhhhc----cccceeeeeccccc
Confidence            358899999888332211 12589999999999876432   11111122233334434332    23568999999999


Q ss_pred             HHHHHHHHhcC----------CCCeEEeeCCCCCCcHHHHhhcCCEEE----EEeccCCCCc---ccChHHHHHhhcCCc
Q 014769          119 AVEVILSVLAR----------PGANVLLPRPGWPYYEGIAQRKQVEVR----HFDLLPERNW---EVDLDAVEALADKNT  181 (419)
Q Consensus       119 al~~~~~~l~~----------~gd~vlv~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~~---~~~~~~l~~~~~~~~  181 (419)
                      +...+++....          ....++....+|++.............    ..+..+ ...   .-+.+.+...+.+..
T Consensus       108 a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~  186 (404)
T d1z7da1         108 ANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAP-QFSKVPYDDLEALEEELKDPN  186 (404)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------CEEEECTTCHHHHHHHHTSTT
T ss_pred             hHHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCc-cccccccchHHHHHHHhcCCC
Confidence            99998876531          224677788888765333222211100    111000 000   125667777776666


Q ss_pred             cEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCc
Q 014769          182 AAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW  259 (419)
Q Consensus       182 ~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  259 (419)
                      .+.+++.| +...|. ..|++++++|.++|+++|+++|+||++.++...|..+ ....++..+.++   +++|.++..++
T Consensus       187 iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~-~~e~~gv~PDiv---t~gK~l~gG~~  262 (404)
T d1z7da1         187 VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---LLGKALSGGHY  262 (404)
T ss_dssp             EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGGTTSS
T ss_pred             EEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccc-cccccCCCCCEE---EEcccccCCCC
Confidence            67777788 445565 5688899999999999999999999999876555432 333444433344   67899655448


Q ss_pred             eeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769          260 RFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEIPCIS  337 (419)
Q Consensus       260 r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~  337 (419)
                      .+|.+++++        ++.+.++... ..+++.++++..|+.+.|+.... +..+...+.-....+.+.+.+++.+.+.
T Consensus       263 p~~~v~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~  334 (404)
T d1z7da1         263 PISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVR  334 (404)
T ss_dssp             CCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred             CcccccchH--------HHHccCCCCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeE
Confidence            999999875        5655555443 33567788888888888875332 3333333334444555555565554332


Q ss_pred             CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .+  ..-|++..+.+....    ....++..++ .++||.+.+..    .+.+|+.+  ..++++|++++++|+++++++
T Consensus       335 ~v--rg~Gl~~~i~~~~~~----~~~~~~~~~l-~~~Gl~~~~~~----~~~ir~~Ppl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         335 DV--RGKGLLCAIEFKNEL----VNVLDICLKL-KENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             EE--EEETTEEEEEECTTT----CCHHHHHHHH-HHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EE--EeeCcEEEEEEcCCc----ccHHHHHHHH-HhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHHhh
Confidence            12  223555566665421    2345666666 56799987643    46789987  468999999999999999876

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.82  E-value=6.7e-19  Score=168.17  Aligned_cols=316  Identities=12%  Similarity=0.055  Sum_probs=192.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCe-------EEeeCCCCCCcHHHHhhc
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN-------VLLPRPGWPYYEGIAQRK  151 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~-------vlv~~p~~~~~~~~~~~~  151 (419)
                      .|+...+..+|++.+++++        ..++++++++|++|++.++++++++|+.       ++...+.+..+.......
T Consensus        70 ~y~~~~~~~~le~~~a~l~--------g~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~~  141 (465)
T d1ax4a_          70 AYAGSRNYYDLKDKAKELF--------NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELN  141 (465)
T ss_dssp             CSSSCHHHHHHHHHHHHHH--------CCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHT
T ss_pred             hhccChHHHHHHHHHHHHH--------CCCEEEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHHHHc
Confidence            6888788889999999998        3478999999999999999999765433       445544444455556667


Q ss_pred             CCEEEEEecc--------CCCCcccChHHHHHhhcC---CccE-EEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769          152 QVEVRHFDLL--------PERNWEVDLDAVEALADK---NTAA-MVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVA  218 (419)
Q Consensus       152 g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~---~~~~-v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~  218 (419)
                      |..+......        ....+.+|++.+++++++   .... +++..++|.. |..+|.+++++|.++|++||+++|+
T Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~  221 (465)
T d1ax4a_         142 GCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVM  221 (465)
T ss_dssp             TCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEE
Confidence            8777655421        223456899999988864   2233 4444445544 3578999999999999999999999


Q ss_pred             cccccccccC----------CCCCCCcc-ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--
Q 014769          219 DEVYGHLTFG----------SIPYTPMG-LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--  285 (419)
Q Consensus       219 De~~~~~~~~----------~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--  285 (419)
                      |+++......          +.....+. .+... ..+...|.+|.  +.+++.|++++++..      .+.......  
T Consensus       222 D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~k~--~~~~~~g~l~~~~~~------~~~~~~~~~~~  292 (465)
T d1ax4a_         222 DSARFCENAYFIKARDPKYKNATIKEVIFDMYKY-ADALTMSAKKD--PLLNIGGLVAIRDNE------EIFTLARQRCV  292 (465)
T ss_dssp             ECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGG-CSEEEEETTST--TCCSSCEEEEESSCH------HHHHHHHHHHH
T ss_pred             ECcchhhhhcccccccccccccchhhhccccccc-cceeEeecccC--cccccceeEeecchH------HHHHhhhcccc
Confidence            9998642210          00000000 00000 11444456665  556668998886532      122222211  


Q ss_pred             --h--ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc---c
Q 014769          286 --L--SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL---E  358 (419)
Q Consensus       286 --~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~---~  358 (419)
                        .  ............++...+.+..   .+...++..++.+++.+.|++. ++.++ .+.++.++++.......   .
T Consensus       293 ~~~~~~~~~~~~~~~~~a~~~~~~e~~---~~~~~~~~~~~~~~l~~~L~~~-g~~~v-~~~~~~~~~~~~~~~~~~~~~  367 (465)
T d1ax4a_         293 PMEGFVTYGGLAGRDMAAMVQGLEEGT---EEEYLHYRIGQVKYLGDRLREA-GIPIQ-YPTGGHAVFVDCKKLVPQIPG  367 (465)
T ss_dssp             HHTCSTTTTTCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHT-TCCBC-SSCCSSEEEEESTTTCTTSCG
T ss_pred             ccccCCCcchhhHHHHHHHhhhhHHhh---hHHHHHHHHHHHHHHHHHHHhh-cCccc-cCCCcceeeeehhhhcCCCcc
Confidence              1  1112223333333333333211   1223344455667788888876 66634 66677666655432110   0


Q ss_pred             CCCCHHHHHHHHHHhcCeEeecCCC-------------CCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769          359 DINDDIEFALKLAKEESVIVTPGIY-------------VGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       359 ~~~~~~~~~~~ll~~~gv~v~~g~~-------------~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .......+..+++.+.||.......             +...+.+|+++.   .++|+++.+++.|++++++..
T Consensus       368 ~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~~~~  441 (465)
T d1ax4a_         368 DQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA  441 (465)
T ss_dssp             GGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred             ccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            0012455677778888997653321             112458999873   489999999999999887643

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.81  E-value=3.7e-17  Score=151.59  Aligned_cols=313  Identities=15%  Similarity=0.136  Sum_probs=205.4

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP  139 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p  139 (419)
                      ..+-.+++.+.++.+.+. +..-.-..++++.+++|+        +..+++.++++|.|+.++++++ .++||+|+++..
T Consensus        12 ~~~~~~~~~~~l~~g~~~-~~~g~~v~~fE~~~a~~~--------g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~~   82 (384)
T d1b9ha_          12 DDAERNGLVRALEQGQWW-RMGGDEVNSFEREFAAHH--------GAAHALAVTNGTHALELALQVMGVGPGTEVIVPAF   82 (384)
T ss_dssp             CHHHHHHHHHHHHTSCCB-TTTCSHHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHHcCCee-ecCCHHHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCCCEEEEecc
Confidence            455577888888876431 122224579999999997        3468899999999999999998 689999999999


Q ss_pred             CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769          140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD  219 (419)
Q Consensus       140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  219 (419)
                      +|......+...|..++.+++++ ..+.+|++.+++.+.+++++|+++   +..|...+   +.++.++|+++++++|+|
T Consensus        83 t~~a~~~ai~~~g~~p~~~d~~~-~~~~~d~~~~~~~i~~~tk~i~~~---~~~g~~~d---~~~i~~~~~~~~i~lieD  155 (384)
T d1b9ha_          83 TFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIMPV---HMAGLMAD---MDALAKISADTGVPLLQD  155 (384)
T ss_dssp             SCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCEE
T ss_pred             ccccccccccccccccccccccc-cccccchhhhcccccccccccccc---cccccccc---cccchhhhhhhhhhhhhh
Confidence            99999999999999999998864 356899999999999888887654   55666666   889999999999999999


Q ss_pred             cccccccc-CCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc---------
Q 014769          220 EVYGHLTF-GSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS---------  287 (419)
Q Consensus       220 e~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~---------  287 (419)
                      .+++.+.. .|..   +..++.    +.+.||  +|.+  .....|.+++.++       ++.+.++....         
T Consensus       156 ~a~a~ga~~~g~~---~g~~g~----~~~~Sf~~~K~i--~~g~GG~i~t~~~-------~~~~~~~~~~~~g~~~~~~~  219 (384)
T d1b9ha_         156 AAHAHGARWQGKR---VGELDS----IATFSFQNGKLM--TAGEGGAVVFPDG-------ETEKYETAFLRHSCGRPRDD  219 (384)
T ss_dssp             CTTCTTCEETTEE---GGGSSS----CEEEECCTTSSS--CSSSCEEEEECTT-------CHHHHHHHHHHTBTTCCTTC
T ss_pred             hceecccccCCEe---cCcccc----cceecccccccc--cccccchhhhhhH-------HHHHHHHHHHhcCCCCcccc
Confidence            99987442 2221   223332    334344  6764  3334688888764       34444443321         


Q ss_pred             ---------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----CceEEEEeecC
Q 014769          288 ---------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-----EGSMVTMVKLN  353 (419)
Q Consensus       288 ---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----~~g~~~~~~~~  353 (419)
                               ..+.++.+....+...|+     .+++..++-+++.+.+.+.|++++++.....+     ...++..+.++
T Consensus       220 ~~~~~~~~G~n~rms~l~Aaig~~qL~-----~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~  294 (384)
T d1b9ha_         220 RRYFHKIAGSNMRLNEFSASVLRAQLA-----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIP  294 (384)
T ss_dssp             SSCCCCSCCCBCBCBHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECT
T ss_pred             ccccccccccccccccchhhhhhhhhh-----hcccchhhhhhhhhhhhhhhhcccccccccccccccccccccccceec
Confidence                     112233333222333333     35555666677777888888877665311111     11223333443


Q ss_pred             cccccCCCCHHHHHHHHHHhcCeEeecCCCC----------CC-------------------CCeEEEEee--cC-HHHH
Q 014769          354 PWLLEDINDDIEFALKLAKEESVIVTPGIYV----------GL-------------------KNWLRIAFC--AE-PSAL  401 (419)
Q Consensus       354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------~~-------------------~~~~Ris~~--~~-~~~l  401 (419)
                      ....   ..-.+++..| +++||.+.+....          +.                   +..+.|.+.  .+ ++++
T Consensus       295 ~~~~---~~Rd~l~~~L-~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei  370 (384)
T d1b9ha_         295 GLTE---ERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPEL  370 (384)
T ss_dssp             TCCH---HHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHH
T ss_pred             cccc---ccHHHHHHHH-HHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEEEccCCCCCCCHHHH
Confidence            2100   0123466666 7789987654321          10                   135777763  34 6799


Q ss_pred             HHHHHHHHHHHHH
Q 014769          402 KDGLGRMKAFCQR  414 (419)
Q Consensus       402 ~~~l~~l~~~~~~  414 (419)
                      +..++.|++++.+
T Consensus       371 ~~I~~~i~~~l~~  383 (384)
T d1b9ha_         371 HATAEIIADAVAR  383 (384)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998875

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.3e-18  Score=165.36  Aligned_cols=314  Identities=13%  Similarity=0.034  Sum_probs=189.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEcccHH-HHHHHHHHHh---cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC
Q 014769           87 PPARRAIADYLSRDLPYKLSADDVYVTLGCK-QAVEVILSVL---ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP  162 (419)
Q Consensus        87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~-~al~~~~~~l---~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~  162 (419)
                      ..+...+.+++.+..|.+... ..++|+|++ .++.+++.++   ..+++.|+++...|.++...+...|.+++.+...+
T Consensus        93 ~~le~~~~~~~~~l~g~~~~~-~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~  171 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSVA-SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  171 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCC-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhCCCccc-CccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeec
Confidence            467777888877766755433 344555554 4555555544   34668999999999999999999999988886433


Q ss_pred             -CCCcccChHHHHHhhcC----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-cc
Q 014769          163 -ERNWEVDLDAVEALADK----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MG  236 (419)
Q Consensus       163 -~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~  236 (419)
                       ++.+.+|+++|++++.+    ++.+|+++.|+|++|.+-+   +++|.++|+++|+++++|++|+.+......... ..
T Consensus       172 ~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~  248 (445)
T d3bc8a1         172 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA  248 (445)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             cCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehh---HHHHHHHHHHhCCcEEEEccchhhhhhccccchhcc
Confidence             34578999999988853    5678888999999999988   999999999999999999999863311000000 01


Q ss_pred             ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcccc-CCchHHHHHHHHHHcccchHHHHHH
Q 014769          237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYS-DIPTFIQGAIPQILEKTKEDFFCKL  315 (419)
Q Consensus       237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~  315 (419)
                      .++.  -.++..|.+|.++.| ...|+++.++.       .+.+.+........ ......+.+....+.   ...+.+.
T Consensus       249 ~~~~--vd~~~~s~hK~~~~p-~g~~~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~  315 (445)
T d3bc8a1         249 RVGR--IDAFVQSLDKNFMVP-VGGAIIAGFNE-------PFIQDISKMYPGRASASPSLDVLITLLSLG---CSGYRKL  315 (445)
T ss_dssp             HHSC--CCEEEEEHHHHHSCC-SSCEEEEESCH-------HHHHHHHHHSCSCBCSHHHHHHHHHHHHHH---HHHHHHH
T ss_pred             CcCC--cceEEecCccccccC-CCCceeeeCCh-------HHHHHHHHHHhhcccCcchHHHHHHHHHHh---hhcchhh
Confidence            1111  126677889975544 33567766542       34555544322211 112222222222222   2334444


Q ss_pred             HHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cCC------
Q 014769          316 IDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PGI------  382 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~------  382 (419)
                      ......+.+++.+.|.++   .+..+...+......++.+.........+..++...| .+.||...    ++.      
T Consensus       316 ~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L-~~~gI~~~~~~~~~~~~~i~~  394 (445)
T d3bc8a1         316 LKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVSG  394 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEETT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHHHHHHH-HHcCCCcceeeccccccchhh
Confidence            444555555555555432   1333233455555555544332111112334455544 56676311    111      


Q ss_pred             ----CCCC------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhcc
Q 014769          383 ----YVGL------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTKK  418 (419)
Q Consensus       383 ----~~~~------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~~  418 (419)
                          .|+.      ..++|++++  .+++||+.+++.|++++++++|+
T Consensus       395 ~~~~~~g~~~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kilk~~rk~  442 (445)
T d3bc8a1         395 HTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE  442 (445)
T ss_dssp             EEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhcCCCCccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence                0111      356899884  68899999999999999998765

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.80  E-value=6.8e-18  Score=158.41  Aligned_cols=347  Identities=14%  Similarity=0.090  Sum_probs=206.2

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.++||..|.-...- -.-+|++.+++.++++....  +..   .......+++.+....+   ..+.++++++++
T Consensus        48 D~~G~~ylD~~~~~~~~~l-Gh~hp~i~~ai~~~~~~~~~--~~~---~~~~~~~la~~~~~~~~---~~~~v~f~~sGs  118 (427)
T d2gsaa_          48 DVDGNRYIDYVGTWGPAIC-GHAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGT  118 (427)
T ss_dssp             ETTSCEEEESSGGGTTTTT-CBTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHH
T ss_pred             ECCCCEEEEechhHHHHhc-cCCcHHHHHHHHHHHHhcCc--ccc---chhHHHHHHHHHHhhCC---ccccccccCCcH
Confidence            3468999999887433221 12579999999999976433  111   12455666776665433   347899999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc--------CCEEEE---EeccCC--CCcccChHHHHHhhcC--C
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK--------QVEVRH---FDLLPE--RNWEVDLDAVEALADK--N  180 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~--------g~~~~~---~~~~~~--~~~~~~~~~l~~~~~~--~  180 (419)
                      +|++.+++....  ...+|+....+|++....+...        +.....   .+..+.  .....|++.+++.+++  .
T Consensus       119 eA~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~  198 (427)
T d2gsaa_         119 EACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPG  198 (427)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEECTTCHHHHHHHHTTSTT
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccCcchHHHHHHHHHhCCC
Confidence            999999987643  3378899999998754332211        111000   000000  0002378888888875  3


Q ss_pred             ccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769          181 TAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG  258 (419)
Q Consensus       181 ~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  258 (419)
                      ..+.+++.| ..-.|. ..|++.+++|.++|++||+++|+||++.++. .|.. .....++..+.++   +++|.+ ..|
T Consensus       199 ~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r-~g~~-~~~~~~gi~PDi~---~~gK~l-ggG  272 (427)
T d2gsaa_         199 EIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFR-IAYG-GVQEKFGVTPDLT---TLGKII-GGG  272 (427)
T ss_dssp             TEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTT-TBTT-CHHHHTTCCCSEE---EECGGG-GTT
T ss_pred             CeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccce-eccc-chHHhcCCCHHHH---hhhhcc-CCC
Confidence            445667777 333454 6788999999999999999999999999873 3332 2223344333444   467985 568


Q ss_pred             ceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcC
Q 014769          259 WRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEI  333 (419)
Q Consensus       259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~  333 (419)
                      +.+|.+++++        ++++.+...    ...+++.++++..++.+.|+...+ +..++..+.-...++.+.+..++.
T Consensus       273 ~p~~a~~~~~--------~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~  344 (427)
T d2gsaa_         273 LPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQET  344 (427)
T ss_dssp             SCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cceeeeeehH--------HHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhc
Confidence            8999988865        566655432    123567788888888888776443 222332222233333333333344


Q ss_pred             CCCCCCCCCCceEEEEeecCccccc-----CCCCH---HHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHH
Q 014769          334 PCISCPNKPEGSMVTMVKLNPWLLE-----DINDD---IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGL  405 (419)
Q Consensus       334 ~~~~~~~~p~~g~~~~~~~~~~~~~-----~~~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l  405 (419)
                      +....+ ...++++.+. +......     ...+.   ..+...+ .++||++.|+..   ..+ -+++..++++|++++
T Consensus       345 ~~~~~v-~~~ggm~~i~-~~~~~v~~~~~~~~~d~~~~~~~~~~l-l~~Gv~l~p~~~---~~~-~~~l~~Te~dId~~l  417 (427)
T d2gsaa_         345 GHAACG-GQVSGMFGFF-FTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF---EAG-FTSLAHTEEDIDATL  417 (427)
T ss_dssp             TCCCEE-EEETTEEEEE-SSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT---SCE-ECCTTCCHHHHHHHH
T ss_pred             CCCcEE-cccCCeEEEE-EeccCCCCHHHhhcccHHHHHHHHHHH-HHCCEEECCCCC---cce-eCCCCCCHHHHHHHH
Confidence            222112 2233443222 2111000     00011   2344455 457999988542   222 255678999999999


Q ss_pred             HHHHHHHHH
Q 014769          406 GRMKAFCQR  414 (419)
Q Consensus       406 ~~l~~~~~~  414 (419)
                      +.+++++++
T Consensus       418 ~al~~al~~  426 (427)
T d2gsaa_         418 AAARTVMSA  426 (427)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHHh
Confidence            999999865

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=7.6e-17  Score=145.64  Aligned_cols=339  Identities=12%  Similarity=0.019  Sum_probs=222.4

Q ss_pred             CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC---CCCC---HHHHHHHHHHHHhhCCCCCCCCcE-EEcc
Q 014769           42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT---NSGI---PPARRAIADYLSRDLPYKLSADDV-YVTL  114 (419)
Q Consensus        42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~l~~~~~~~~~~~~i-~~t~  114 (419)
                      .+.|+|--..      -..++.+++++...+.+....+|+.   ..|.   .++++...+..++.++    .+.+ +-..
T Consensus        26 ~~~i~LiaSE------N~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~----a~~anVqp~   95 (416)
T d1dfoa_          26 EEHIELIASE------NYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFG----ADYANVQPH   95 (416)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSEEECCCS
T ss_pred             HcCceEecCc------ccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhC----CCcceeecc
Confidence            4557775553      1356888888776665432223332   1233   4555545555555444    2333 2257


Q ss_pred             cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH-----HhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeC
Q 014769          115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGI-----AQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIIN  188 (419)
Q Consensus       115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~  188 (419)
                      +++.|+..++.++++|||+|+..++.+.++...     +.....+...+++++  +..+|.|++++.... +++++++..
T Consensus        96 SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~--~~~IDyd~l~~~a~~~kPklIi~G~  173 (416)
T d1dfoa_          96 SGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDA--TGHIDYADLEKQAKEHKPKMIIGGF  173 (416)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCS--SSSBCHHHHHHHHHHHCCSEEEEEC
T ss_pred             cCccHHHHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCC--ccCccHHHHHHHHHHhccceEEecc
Confidence            788999999999999999999999888775321     222335667777754  345999999887654 677776654


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      -.+  ...++   ++++.++|++.|.++++|.+|......+..+++...+. +   ++.+|++|+  ++|.|.|.++++.
T Consensus       174 S~y--~r~~d---~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~a-D---vvt~tThKt--lrGPrggiI~~~~  242 (416)
T d1dfoa_         174 SAY--SGVVD---WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHA-H---VVTTTTHKT--LAGPRGGLILAKG  242 (416)
T ss_dssp             SSC--CSCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTS-S---EEEEESSST--TCCCSCEEEEESS
T ss_pred             ccc--ccccC---HHHHHHHHHhcCceEEcchhhhhcceeccccCCccccc-c---eeeeehhhc--ccCCCceEEEecc
Confidence            333  34556   88999999999999999999975443333332222232 2   888899998  6888999999864


Q ss_pred             CCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 014769          269 PNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM  346 (419)
Q Consensus       269 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  346 (419)
                      ..     .++.+++.....  ..+++......+.+.++.+.....+.+..+++.++.+.|.+.|.+. |+.++.......
T Consensus       243 ~~-----~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~-G~~iv~ggTdnH  316 (416)
T d1dfoa_         243 GS-----EELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLER-GYKVVSGGTDNH  316 (416)
T ss_dssp             CC-----HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSS
T ss_pred             ch-----HhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC-CcccccCCCCCc
Confidence            32     256667765532  2334444444444555555444667888889999999999999988 888554445556


Q ss_pred             EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC------CCCCeEEEEe------ecCHHHHHHHHHHHHHHHHH
Q 014769          347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV------GLKNWLRIAF------CAEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~------~~~~~~Ris~------~~~~~~l~~~l~~l~~~~~~  414 (419)
                      .+++++....     -....++..|++.||.+.--.-+      ..+..+||+.      +..++++++..+.|.++++.
T Consensus       317 lvlvdl~~~~-----~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~  391 (416)
T d1dfoa_         317 LFLVDLVDKN-----LTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS  391 (416)
T ss_dssp             EEEEECGGGT-----CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             eeEEEecccC-----CCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHHc
Confidence            7788875432     12344567779999988532222      1257899998      24679999999998888753

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.80  E-value=3.3e-17  Score=155.15  Aligned_cols=372  Identities=10%  Similarity=0.042  Sum_probs=232.3

Q ss_pred             chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCC---CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Q 014769           22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTA---FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLS   98 (419)
Q Consensus        22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~   98 (419)
                      +....++++++.+.+...    ....+  .|..   .+..+.++.+...+...+-+.....|...+...++++.+.+|+.
T Consensus        50 g~~~~~~l~~~~~~i~~~----~~~~~--~P~f~~~~~~~~~~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v~~wl~  123 (476)
T d1js3a_          50 PDTFEDILQDVEKIIMPG----VTHWH--SPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLG  123 (476)
T ss_dssp             CCCHHHHHHHHHHTTGGG----CCCTT--STTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhCC----CCCCC--CCCeeEeCCCCCCHHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHH
Confidence            446677777776655322    11111  1211   11123455555555444444443344444566899999999999


Q ss_pred             hhCCCCC-------CCCcEEEcccHHHHHHHHHHHhcC----------CC---------CeEEeeCCCCCCcHHHHhhcC
Q 014769           99 RDLPYKL-------SADDVYVTLGCKQAVEVILSVLAR----------PG---------ANVLLPRPGWPYYEGIAQRKQ  152 (419)
Q Consensus        99 ~~~~~~~-------~~~~i~~t~g~~~al~~~~~~l~~----------~g---------d~vlv~~p~~~~~~~~~~~~g  152 (419)
                      +..|.+-       ....-++|+|+++++..++.+...          +|         -.|++.+-+|+++...+...|
T Consensus       124 ~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lG  203 (476)
T d1js3a_         124 KMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGG  203 (476)
T ss_dssp             HHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHT
T ss_pred             HHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEecccccHHHHHHHHhcC
Confidence            9888753       223568999999998888765432          11         147788899999999999999


Q ss_pred             CEEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769          153 VEVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT  226 (419)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  226 (419)
                      +.+..++++  .++.+|+++|++.+++.      +.+|+.+..++.||.+-|   +++|.++|+++++|+++|.+|+++.
T Consensus       204 l~~~~v~~d--~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDp---l~~I~~i~~~~~~wlHVDAA~Gg~~  278 (476)
T d1js3a_         204 VKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSA  278 (476)
T ss_dssp             CEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGG
T ss_pred             ceEEEeccC--CCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeecc---HHHHHHHHHhcCcEEEEecccchhh
Confidence            999888875  45689999999988642      234566677899999999   9999999999999999999998765


Q ss_pred             cCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc----chhhHHHHHHhh-------hccc--cC-
Q 014769          227 FGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF----QKSGIIDSIKDC-------LSIY--SD-  291 (419)
Q Consensus       227 ~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~----~~~~~~~~l~~~-------~~~~--~~-  291 (419)
                      .-.... ..+..+... . -+..+++|.+ .....+|.+.+++...+.    ..+.........       ...+  .+ 
T Consensus       279 ~~~~~~~~~~~gi~~a-D-Sit~d~HK~l-~~P~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr  355 (476)
T d1js3a_         279 FICPEFRHLLNGVEFA-D-SFNFNPHKWL-LVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGR  355 (476)
T ss_dssp             GGSTTTGGGGTTGGGC-S-EEEECHHHHS-SCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCC
T ss_pred             hhhcchhhhhcCCccc-c-eeeecCcccc-ccCCcceeecccchHHHHHHHhcChhhhccccccccccccccccccccch
Confidence            332221 112222211 1 3344799984 455568888887632100    000001000000       0000  01 


Q ss_pred             -CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHH
Q 014769          292 -IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKL  370 (419)
Q Consensus       292 -~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~l  370 (419)
                       ...+..+++   +.....+.+++..++..+..+++.+.|++.|+++++.+|.-+. +.+++....    .-..++.+++
T Consensus       356 ~~~al~lw~~---l~~~G~~g~~~~i~~~~~lA~~l~~~l~~~~~fel~~~p~l~i-V~Fr~~~~d----~~n~~l~~~l  427 (476)
T d1js3a_         356 RFRSLKMWFV---FRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGL-VCFRLKGSD----GLNEALLERI  427 (476)
T ss_dssp             CCTHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSE-EEEEESSCH----HHHHHHHHHH
T ss_pred             hhHHHHHHHH---HHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCceEE-EEEEccCCh----HHHHHHHHHH
Confidence             112222233   3322357888889999999999999999998998665666664 445654311    0124566666


Q ss_pred             HHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769          371 AKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT  416 (419)
Q Consensus       371 l~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~  416 (419)
                      .++..+.+.+.. .....++|++++   +++++|+.+++.|++..+++.
T Consensus       428 ~~~G~~~~s~t~-~~g~~~lR~~i~n~~Tt~~did~~~~~i~~~a~~ll  475 (476)
T d1js3a_         428 NSARKIHLVPCR-LRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELL  475 (476)
T ss_dssp             HHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCEEEeeee-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            555445555432 222458999984   578999999999999988764

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.79  E-value=2.8e-17  Score=147.78  Aligned_cols=350  Identities=13%  Similarity=0.066  Sum_probs=226.8

Q ss_pred             chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC------CCCCCHHHHHHHHH
Q 014769           22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPARRAIAD   95 (419)
Q Consensus        22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~   95 (419)
                      ...|..++++=..+     ..+.|+|--..      -..++.+++++...+.+....+|+      ..+-+.++++...+
T Consensus         8 D~ei~~~i~~e~~r-----q~~~l~LiaSE------N~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~   76 (405)
T d1kl1a_           8 DPQVFAAIEQERKR-----QHAKIELIASE------NFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARE   76 (405)
T ss_dssp             CHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-----HHcCceEeccC------CcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHH
Confidence            34455555543222     34557775553      135688888877666543322333      22233455544555


Q ss_pred             HHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH-----HHhhcCCEEEEEeccCCCCcccC
Q 014769           96 YLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG-----IAQRKQVEVRHFDLLPERNWEVD  169 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~  169 (419)
                      ..++.++    .+.+ +-..+++.|...++.+|++|||+|+..++...++..     .......+...++++++ ++.+|
T Consensus        77 ra~~lF~----a~~anVqp~SGs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~ID  151 (405)
T d1kl1a_          77 RAKQLFG----AEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPE-THVID  151 (405)
T ss_dssp             HHHHHHC----CSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTT-TCSBC
T ss_pred             HHHHHhC----CCcceeeccCchHHHHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccchh-ccccc
Confidence            5555444    2333 335677888899999999999999999877665432     12233467778887754 45899


Q ss_pred             hHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCcEEEE
Q 014769          170 LDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVPVITL  247 (419)
Q Consensus       170 ~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~  247 (419)
                      .|++++.++. +|++|++-.-.+|  ..++   ++++.++|++.|.++++|.+|... +.++..+.|+ .+. +   ++.
T Consensus       152 ~d~l~~~a~~~kPklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~-~~a-D---vvt  221 (405)
T d1kl1a_         152 YDDVREKARLHRPKLIVAAASAYP--RIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV-PYA-H---FVT  221 (405)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTC-S---EEE
T ss_pred             HHHHHHHHHhhCcceEEecccccc--cccC---hHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChh-hhh-h---hee
Confidence            9999988765 5666555433333  3345   889999999999999999999654 3344333333 332 2   778


Q ss_pred             ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769          248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI  325 (419)
Q Consensus       248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  325 (419)
                      +|++|+  ++|.|.|.+++++        ++.+++.....  ..+++......+.+.++.+-....+++..+++.++.+.
T Consensus       222 ~tThKt--lrGPrgg~I~~~~--------~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAka  291 (405)
T d1kl1a_         222 TTTHKT--LRGPRGGMILCQE--------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKR  291 (405)
T ss_dssp             EESSST--TCCCSCEEEEECH--------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             cccccc--ccCCCCceEEecc--------hhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence            899998  6888999999864        57777776542  22334434444444445442245667888899999999


Q ss_pred             HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cCCC--CCCCCeEEEEe-----
Q 014769          326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PGIY--VGLKNWLRIAF-----  394 (419)
Q Consensus       326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~--~~~~~~~Ris~-----  394 (419)
                      |.+.|.+. |+.++..-.....+++++.....    + ...++++|++.||.+.    |+..  ...+..+||+.     
T Consensus       292 La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~----~-g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~Tt  365 (405)
T d1kl1a_         292 LASALQNE-GFTLVSGGTDNHLLLVDLRPQQL----T-GKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTT  365 (405)
T ss_dssp             HHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC----C-HHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHH
T ss_pred             HHHHHhcC-CceeecCCCccceeeccccccCC----c-HHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHh
Confidence            99999987 88755333456677888754321    2 3445677799999886    3321  11247899998     


Q ss_pred             -ecCHHHHHHHHHHHHHHHH
Q 014769          395 -CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       395 -~~~~~~l~~~l~~l~~~~~  413 (419)
                       +..++++.++.+.|.++++
T Consensus       366 rG~~e~dm~~ia~~I~~~l~  385 (405)
T d1kl1a_         366 RGFGLEEMDEIAAIIGLVLK  385 (405)
T ss_dssp             TTCCHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHh
Confidence             2468999999999998884

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.78  E-value=1.4e-17  Score=157.58  Aligned_cols=294  Identities=13%  Similarity=0.127  Sum_probs=186.3

Q ss_pred             HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCC
Q 014769           89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERN  165 (419)
Q Consensus        89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~  165 (419)
                      +...+..++.+..|.  +.....+..|+++++..++.++..  +++.|+++.-.|+++...+...|..+..++..+ +..
T Consensus       114 ~~~~~~~~~~~~~g~--~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~  191 (434)
T d2z67a1         114 LTNKILESFFKQLGL--NVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDR  191 (434)
T ss_dssp             HHHHHHHHHHHHTTC--CCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred             HHHHHHHHHHHhcCC--CcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCc
Confidence            333333444443442  334556667777777777777643  789999999999999899999999988887533 334


Q ss_pred             cccChHHHHHhhcC-----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccccc-CCCCCCCccccC
Q 014769          166 WEVDLDAVEALADK-----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF-GSIPYTPMGLFG  239 (419)
Q Consensus       166 ~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~  239 (419)
                      +.+|+++|++++.+     ++.+|+++.|++++|.+-+   +++|.++|+++|+++++|++|+.+.. .+........++
T Consensus       192 ~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~---l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~~  268 (434)
T d2z67a1         192 VYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYR  268 (434)
T ss_dssp             EECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSC
T ss_pred             cCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccC---HHHHHHHHHHhCCeEEEeccchhhhhhccccccccccCC
Confidence            67999999998864     5667888899999999988   99999999999999999999975321 111111112222


Q ss_pred             CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcccc-CCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769          240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYS-DIPTFIQGAIPQILEKTKEDFFCKLIDT  318 (419)
Q Consensus       240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~  318 (419)
                      .   .+++.|++|.++.+ ...|++.+++       .++++.+........ ..+.....+....+.   .+.+.+..++
T Consensus       269 ~---D~~~~s~hK~l~~~-~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~---~~g~~~~~~~  334 (434)
T d2z67a1         269 V---DAVVSSSDKNLLTP-IGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVSLLSMG---SKNYLELVKN  334 (434)
T ss_dssp             C---SEEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred             c---ceEEEcCccccccC-CCccccccCc-------HHHHHHHHhhcccccccchHHHHHHHHHHHH---HhcchhHHHH
Confidence            2   26788999985543 3456666654       246666655433221 222222223322222   3455666666


Q ss_pred             HHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC-----------CCC
Q 014769          319 LRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG-----------IYV  384 (419)
Q Consensus       319 ~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g-----------~~~  384 (419)
                      ..++.+++.+.|+++   .+.... .+.....+.+.++.       +..++...| .+.||....+           ..+
T Consensus       335 ~~~~a~~l~~~L~~l~~~~g~~ll-~~~~~~~~~~~~~~-------~~~~l~~~L-~~~gI~g~~v~~~l~~~g~~~~~~  405 (434)
T d2z67a1         335 QKNSKKLLDELLNDLSKKTGGKFL-DVESPIASCISVNS-------DPVEIAAKL-YNLRVTGPRGIKKTDHFGNCYLGT  405 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCBC-CCCCSSEEEEECSS-------CHHHHHHHH-HHTTEESCEEECTTCHHHHTCSSC
T ss_pred             HHHHHHHHHHHHHHhhhhcCceec-CCCCCceeeeecCC-------CHHHHHHHH-HHcCCeeeehhhhccccCeeeecc
Confidence            667777777766653   244423 22222233333432       566676665 6678854211           112


Q ss_pred             CCCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769          385 GLKNWLRIAFC--AEPSALKDGLGRMKA  410 (419)
Q Consensus       385 ~~~~~~Ris~~--~~~~~l~~~l~~l~~  410 (419)
                      +..+++|++++  .++|||+.+++.|++
T Consensus       406 ~~~~~l~~~~s~~~T~edID~~i~~L~k  433 (434)
T d2z67a1         406 YTHDYIVMNAAIGVRTEDIVNSVSKLEK  433 (434)
T ss_dssp             CSCCEEEEECCTTCCHHHHHHHHHHHHT
T ss_pred             cCCCeEEEecCCCCCHHHHHHHHHHHhc
Confidence            23678999984  689999999999985

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=7.9e-17  Score=147.18  Aligned_cols=208  Identities=18%  Similarity=0.120  Sum_probs=148.2

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEecc
Q 014769           86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLL  161 (419)
Q Consensus        86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~  161 (419)
                      ...|++.|+++-        ..+..+++++|++|+..++ .++.+||.|++....|.+....+    ...|..+..+.  
T Consensus        57 ~~~lE~~la~LE--------~~~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~--  125 (393)
T d1n8pa_          57 RENLERAVAALE--------NAQYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN--  125 (393)
T ss_dssp             HHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES--
T ss_pred             HHHHHHHHHHHh--------CCceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee--
Confidence            346666666654        3456788888899997665 56678999999999998765444    44566665543  


Q ss_pred             CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHH----hCCCeEEEcccccccccCCCCCCCccc
Q 014769          162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR----KLRVMVVADEVYGHLTFGSIPYTPMGL  237 (419)
Q Consensus       162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~~  237 (419)
                            .+.+++++++++++++|++-+|.||+..+.+   +++++++++    ++|+++|+|..+..-...    .++ .
T Consensus       126 ------~~~~~~~~~i~~~t~lv~~EspsNP~l~v~D---i~~ia~~a~~~~~~~g~~lvVDnT~atP~~~----~Pl-~  191 (393)
T d1n8pa_         126 ------DLLNDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS----NPL-N  191 (393)
T ss_dssp             ------SHHHHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC----CGG-G
T ss_pred             ------cchHHHHHHhhhhcceeEecCcchhhhhccc---hhhhhhhhhhhcccCCceEEEecCccCcccC----Cch-h
Confidence                  2457899999999999999999999999999   777777777    789999999999753211    122 3


Q ss_pred             cCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHH
Q 014769          238 FGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKL  315 (419)
Q Consensus       238 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~  315 (419)
                      ++.+   |++.|++|.++..| .-.|.++..+       .++.+.++.... .....++...+.+..-++.     +.-+
T Consensus       192 ~GAD---iVvhS~TKyi~GhsDv~~G~v~~~~-------~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T-----l~lR  256 (393)
T d1n8pa_         192 FGAD---IVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LHLR  256 (393)
T ss_dssp             GTCS---EEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred             hCCC---EEEEccccccCCCCccccceeeecc-------hhHHHHHHHHHhhcCCCCChHHHHHHHhCCcc-----hhhH
Confidence            4444   99999999977655 4556666543       145666766543 3455677666666666654     5666


Q ss_pred             HHHHHHHHHHHHHHhhcC
Q 014769          316 IDTLRESAEICYDGVKEI  333 (419)
Q Consensus       316 ~~~~~~~~~~l~~~l~~~  333 (419)
                      .++..++...+.+.|+..
T Consensus       257 ~~~~~~nA~~lA~~L~~~  274 (393)
T d1n8pa_         257 VRQAALSANKIAEFLAAD  274 (393)
T ss_dssp             HHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            677777888888888653

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.76  E-value=5.8e-17  Score=152.44  Aligned_cols=356  Identities=12%  Similarity=0.039  Sum_probs=208.1

Q ss_pred             cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769           38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK  117 (419)
Q Consensus        38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~  117 (419)
                      ..+|+.+|||..|.-... .-.-+|.+.+++.++++....   .......+.+..+++.|.+...  ...+.++++++++
T Consensus        37 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~~~la~~L~~~~~--~~~~~v~f~~sGs  110 (431)
T d1zoda1          37 DADGRAILDFTSGQMSAV-LGHCHPEIVSVIGEYAGKLDH---LFSEMLSRPVVDLATRLANITP--PGLDRALLLSTGA  110 (431)
T ss_dssp             CTTCCEEEETTHHHHTCT-TCBTCHHHHHHHHHHHHHCCC---CCTTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHH
T ss_pred             ECCCCEEEEcccCHHhhh-hcCCCHHHHHHHHHHHhhccc---cccccccHHHHHHHHHHHHhCC--cccceeeeccccc
Confidence            346899999988732211 112579999999999876432   1111223344456665554332  2457899999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC------------EEEEEeccCCCC-------cccC---hHHH
Q 014769          118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV------------EVRHFDLLPERN-------WEVD---LDAV  173 (419)
Q Consensus       118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~~-------~~~~---~~~l  173 (419)
                      +|++.+++....  ..+.|+....+|++....+...+.            ....++......       ...+   ++.+
T Consensus       111 eA~e~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (431)
T d1zoda1         111 ESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYA  190 (431)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHH
T ss_pred             chHHHHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHH
Confidence            999999987532  347888889999886544433221            112222111000       0011   2222


Q ss_pred             HHhh---cCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEe
Q 014769          174 EALA---DKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG  248 (419)
Q Consensus       174 ~~~~---~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  248 (419)
                      ...+   ..+..+.++..| ....|. ..|++++++|.++|+++|+++|.||++.++...|..+ ....++..+.++   
T Consensus       191 ~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~-~~~~~gv~PDi~---  266 (431)
T d1zoda1         191 FDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPDIL---  266 (431)
T ss_dssp             HHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---
T ss_pred             HHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEecccccccccccccc-ccccCCCCcchh---
Confidence            2222   234566778888 333444 5799999999999999999999999999876655433 222333333344   


Q ss_pred             cCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHH
Q 014769          249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAE  324 (419)
Q Consensus       249 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~  324 (419)
                      +++|.+ ..|+.++.+++.+        +..+.+...   ...+++.++++..++.+.++.... +.+++..+.-....+
T Consensus       267 ~~gK~l-~gG~p~~av~~~~--------~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~  337 (431)
T d1zoda1         267 TLSKTL-GAGLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRR  337 (431)
T ss_dssp             EECHHH-HTTSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             cccccc-ccccccceeeeee--------cchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Confidence            467984 5678888888764        355544332   233567788888887777765332 233333333333444


Q ss_pred             HHHHHhhcCCCCCCCCCCCceEEEEeecCccc---ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHH
Q 014769          325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL---LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPS  399 (419)
Q Consensus       325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~  399 (419)
                      .+.+.+.+.+-+..+  ..-|.+.-+.+....   .........+...+ .++|+....-......+.+|+++  ..+++
T Consensus       338 ~l~~~~~~~~~i~~v--rG~Glm~~ie~~~~~~~~~~~~~~~~~i~~~~-~~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~  414 (431)
T d1zoda1         338 GLLDLMERFDCIGDV--RGRGLLLGVEIVKDRRTKEPADGLGAKITREC-MNLGLSMNIVQLPGMGGVFRIAPPLTVSED  414 (431)
T ss_dssp             HHHHHHHHCTTEEEE--EEETTEEEEEEEEETTTTEECTTHHHHHHHHH-HHTTEECCEECCTTSCCEEEECCCTTCCHH
T ss_pred             hhhhhhhcCCCeEEE--eecceEEEEEEecCCcccCccHHHHHHHHHHH-HHhCcccCeeeecCCCCEEEEECCCCCCHH
Confidence            455555555422211  222444444442110   00000124455555 55788642212222367899997  46899


Q ss_pred             HHHHHHHHHHHHHHHH
Q 014769          400 ALKDGLGRMKAFCQRH  415 (419)
Q Consensus       400 ~l~~~l~~l~~~~~~~  415 (419)
                      +|++++++|++++++.
T Consensus       415 eid~~~~~l~~al~~v  430 (431)
T d1zoda1         415 EIDLGLSLLGQAIERA  430 (431)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999875

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.76  E-value=4.1e-16  Score=143.02  Aligned_cols=362  Identities=11%  Similarity=0.010  Sum_probs=233.3

Q ss_pred             chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHH
Q 014769           22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAIAD   95 (419)
Q Consensus        22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~   95 (419)
                      ...|..++++-..+     ....|+|--..      -..++.+++++...+.+....      .|+...-+.+++....+
T Consensus        16 D~ei~~~i~~e~~r-----q~~~l~LIaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~   84 (470)
T d1rv3a_          16 DAEVYDIIKKESNR-----QRVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQK   84 (470)
T ss_dssp             CHHHHHHHHHHHHH-----HHSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-----HHcCceEecCC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHH
Confidence            34555555533222     34557765553      235788888877666543222      23333344566666667


Q ss_pred             HHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----------HhhcCCEEEEEeccCCC
Q 014769           96 YLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----------AQRKQVEVRHFDLLPER  164 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----------~~~~g~~~~~~~~~~~~  164 (419)
                      ...+.++...+...+ +-..+++.|...++.++++|||+|+..+....++..-          +.....+...++++++ 
T Consensus        85 ra~~lF~~~~~~~~anVqp~SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~-  163 (470)
T d1rv3a_          85 RALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD-  163 (470)
T ss_dssp             HHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT-
T ss_pred             HHHHHhCCChhhccccccccCCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecc-
Confidence            667767654333344 3357889999999999999999999987666544211          1122356778888765 


Q ss_pred             CcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCC
Q 014769          165 NWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIV  242 (419)
Q Consensus       165 ~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~  242 (419)
                      .+.+|.+++++..+. +|++|++-.-.+|  ..++   ++++.++|.+.|.++++|.+|.... -+|.-..|+ .+. + 
T Consensus       164 ~~~IDyd~l~~~a~~~kPklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl-~~a-D-  235 (470)
T d1rv3a_         164 TGYIDYDRLEENARLFHPKLIIAGTSCYS--RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF-EHC-H-  235 (470)
T ss_dssp             TCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG-GTC-S-
T ss_pred             cCcccHHHHHHHHHhhCcceEeechhhcc--ccCC---HHHHHHHHhccCCeEEecchhhhhhccccccCChh-hee-e-
Confidence            357999999887765 5666665443333  3345   8899999999999999999996543 334333343 332 2 


Q ss_pred             cEEEEecCCCcCCCCCceeEEEEeeCCCCcc-------chhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHH
Q 014769          243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIF-------QKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-------~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                        ++.+|++|+  ++|.|.|.+.++++..-.       ...++.+++.....  +.+++......+.+.++.+.....+.
T Consensus       236 --vvt~tTHKt--lrGPrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk  311 (470)
T d1rv3a_         236 --VVTTTTHKT--LRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFK  311 (470)
T ss_dssp             --EEEEESSGG--GCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHH
T ss_pred             --eeeeehhhh--ccCCcceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHH
Confidence              888899998  689999999987631000       00136677766542  23444444444555555543345678


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cCCCC-CCCC
Q 014769          314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PGIYV-GLKN  388 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~~-~~~~  388 (419)
                      +..+++.++.+.|.+.|.+. |+.++........+++++....   . +. ..+++.|++.||.+.    |+... ..+.
T Consensus       312 ~Ya~qvv~NAk~La~~L~~~-G~~v~~ggTdnHlvlvdl~~~g---~-~g-~~ae~~Le~~gI~~Nkn~iP~D~~~~~~s  385 (470)
T d1rv3a_         312 EYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSKG---T-DG-GRAEKVLEACSIACNKNTCPGDKSALRPS  385 (470)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGGT---C-CH-HHHHHHHHHTTEECEEECCSSCSCTTSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CceeccCCCCCceEEEeecccC---C-cH-HHHHHHHHHcCcEECCCcCCCCCCCCCCC
Confidence            88899999999999999987 7775544555677787775432   1 33 345677799999875    43321 1257


Q ss_pred             eEEEEe------ecCHHHHHHHHHHHHHHHH
Q 014769          389 WLRIAF------CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       389 ~~Ris~------~~~~~~l~~~l~~l~~~~~  413 (419)
                      .+||+.      +..++++.++.+.|.++++
T Consensus       386 GiRiGT~alTtrG~~e~dm~~iA~~I~~~l~  416 (470)
T d1rv3a_         386 GLRLGTPALTSRGLLEKDFQKVAHFIHRGIE  416 (470)
T ss_dssp             EEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             eeEecCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            899998      2467899988888888774

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.76  E-value=1.3e-16  Score=152.03  Aligned_cols=315  Identities=12%  Similarity=0.015  Sum_probs=178.3

Q ss_pred             CCHHHHHHHHHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh-cCCEEEEEe--c
Q 014769           85 GIPPARRAIADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFD--L  160 (419)
Q Consensus        85 g~~~lr~~ia~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~--~  160 (419)
                      -+.++++.+|+++      +  .++. ++++|+++++.+++.++++|||.|+++..+|.+....... .+..+.+..  +
T Consensus        67 ~i~eae~~~A~~~------g--a~~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~~  138 (462)
T d1c4ka2          67 PAVAAEKHAARVY------N--ADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR  138 (462)
T ss_dssp             HHHHHHHHHHHHT------T--CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred             HHHHHHHHHHHHh------C--CCeEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeeccc
Confidence            3468899999987      3  3454 5567777888888999999999999999999887654433 344444333  3


Q ss_pred             cCCCC-c-----ccChHH---------HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc
Q 014769          161 LPERN-W-----EVDLDA---------VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL  225 (419)
Q Consensus       161 ~~~~~-~-----~~~~~~---------l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~  225 (419)
                      ++... .     .++.+.         ++.+...+++.+++++.+|-.|.+.+   +++|+++|+++|+++++|++|+..
T Consensus       139 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~d---l~~I~~ia~~~g~~l~vD~A~~~~  215 (462)
T d1c4ka2         139 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGY  215 (462)
T ss_dssp             CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCG
T ss_pred             ccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhh---HHHHHHHHHHcCCEEEEechhhcc
Confidence            22111 1     122222         23334446666777777777999999   999999999999999999999864


Q ss_pred             ccC-CCCCCCccccC-----CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh--HHHHHHhhh--ccccCCchH
Q 014769          226 TFG-SIPYTPMGLFG-----SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG--IIDSIKDCL--SIYSDIPTF  295 (419)
Q Consensus       226 ~~~-~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~--~~~~l~~~~--~~~~~~~~~  295 (419)
                      ... +.........+     ..+..+++.|++|.++.++  .|.++..+...+.....  -...++...  ..+.+++..
T Consensus       216 ~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~sp~~~  293 (462)
T d1c4ka2         216 EQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYP  293 (462)
T ss_dssp             GGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHH
T ss_pred             ccccCcCCcchhhccccccccCCccEEEEecCccccccc--ceEEEEeccccccccchhhhHHHHHHhhhhcccCCchHH
Confidence            322 11111111111     1122588999999976554  34444433221110000  011122211  113445555


Q ss_pred             HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC---------------------------C------
Q 014769          296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK---------------------------P------  342 (419)
Q Consensus       296 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---------------------------p------  342 (419)
                      ....+..+.........++..++..++.+.+++.+.++++......                           |      
T Consensus       294 ~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (462)
T d1c4ka2         294 MYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHA  373 (462)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTC
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhcc
Confidence            4444444333322344555566666777777777665432210000                           0      


Q ss_pred             ----CceEE------EEeecCcccc------cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHH
Q 014769          343 ----EGSMV------TMVKLNPWLL------EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDG  404 (419)
Q Consensus       343 ----~~g~~------~~~~~~~~~~------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~  404 (419)
                          ....+      +.+..+....      .......++. +.|+++||.+.-.    ....+|++++  .++++++.+
T Consensus       374 ~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~-~~L~~~gI~~e~~----~~~~i~~~~s~~~T~edid~l  448 (462)
T d1c4ka2         374 YEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVA-NYLRDHGIIPEKS----DLNSILFLMTPAETPAKMNNL  448 (462)
T ss_dssp             CTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHH-HHHHHTTCCCSEE----CSSEEEEECCTTCCHHHHHHH
T ss_pred             ccccCccceecccceeEEecCCccccccchhhcCCcHHHHH-HHHHHcCCeeecc----CCCeEEEEecCCCCHHHHHHH
Confidence                00001      1222211100      0011244554 4558899965322    2467899984  689999999


Q ss_pred             HHHHHHHHHHHhc
Q 014769          405 LGRMKAFCQRHTK  417 (419)
Q Consensus       405 l~~l~~~~~~~~~  417 (419)
                      ++.|+++.+.+.+
T Consensus       449 i~aL~ei~r~~~~  461 (462)
T d1c4ka2         449 ITQLLQLQRLIEE  461 (462)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999887754

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.73  E-value=9.3e-17  Score=151.88  Aligned_cols=340  Identities=11%  Similarity=0.002  Sum_probs=195.8

Q ss_pred             CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      +|+.+|||..|..+.. .-.-+|++.+++.+++....+   ..+.. .....+.+.+++.+....+  .+.+.+++++++
T Consensus        51 dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~~~~~-~~~~~~a~~lae~l~~~~~--~~~~~v~f~~sG  126 (461)
T d1ohwa_          51 DGNRMLDLYSQISSIP-IGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACG  126 (461)
T ss_dssp             TSCEEEESSHHHHTCS-SCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSH
T ss_pred             CCCEEEEcccCHHHHh-hcCCcHHHHHHHHHHHhhhhhcccccccc-cchHHHHHHHHHHHHhhhc--cCcceeeeecch
Confidence            5888999987733221 112478899999887653211   01111 1123456667776644322  245689999999


Q ss_pred             HHHHHHHHHHhc----------------------------CCCCeEEeeCCCCCCcHHHHhhcCCE------------EE
Q 014769          117 KQAVEVILSVLA----------------------------RPGANVLLPRPGWPYYEGIAQRKQVE------------VR  156 (419)
Q Consensus       117 ~~al~~~~~~l~----------------------------~~gd~vlv~~p~~~~~~~~~~~~g~~------------~~  156 (419)
                      ++|++.+++...                            .+...|+....+|++....+......            ..
T Consensus       127 seAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~  206 (461)
T d1ohwa_         127 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP  206 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCC
T ss_pred             hhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCc
Confidence            999999987652                            12347899999999854333322211            01


Q ss_pred             EEeccCC-CCc-----------ccChHHHHHhhc-----CCccEEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEE
Q 014769          157 HFDLLPE-RNW-----------EVDLDAVEALAD-----KNTAAMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       157 ~~~~~~~-~~~-----------~~~~~~l~~~~~-----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li  217 (419)
                      ..+.... ...           ..+.+.+++.+.     .+..+.+++.| +...| ...|.+.+++|.++|++||+++|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI  286 (461)
T d1ohwa_         207 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL  286 (461)
T ss_dssp             EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             ccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCccee
Confidence            1111000 000           011334444332     24456677777 44445 46899999999999999999999


Q ss_pred             EcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCch
Q 014769          218 ADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPT  294 (419)
Q Consensus       218 ~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~  294 (419)
                      +||++.++...|..+ ....++.  .+.++   +++|.++  |   |+.....         .+...... ...+++.++
T Consensus       287 ~DEV~tG~gRtG~~~-~~e~~gi~~~PDiv---~~gK~l~--~---g~~~~~~---------~~~~~~~~~~~~T~~g~p  348 (461)
T d1ohwa_         287 VDEVQTGGGSTGKFW-AHEHWGLDDPADVM---TFSKKMM--T---GGFFHKE---------EFRPNAPYRIFNTWLGDP  348 (461)
T ss_dssp             EECTTTCSSTTSSSS-GGGGGCCSSCCSEE---EECGGGS--S---EEEEECG---------GGSCSSTTSSCCSCSSCH
T ss_pred             ccccccccccccccc-cccccccccCchhh---hhhhccc--c---ccccccc---------cccccccccccccccccc
Confidence            999999987666432 3333332  22334   5779843  2   4443321         11111111 223566778


Q ss_pred             HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHH
Q 014769          295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKL  370 (419)
Q Consensus       295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~l  370 (419)
                      ++..++.+.|+...++.   ..++.++..+++.+.|+    +.|.+. -....-|++.-+.+++..     ...++...+
T Consensus       349 ~~~aaa~a~l~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~~~i-~~vrG~Gl~~~ie~~~~~-----~~~~i~~~~  419 (461)
T d1ohwa_         349 SKNLLLAEVINIIKRED---LLSNAAHAGKVLLTGLLDLQARYPQFI-SRVRGRGTFCSFDTPDES-----IRNKLISIA  419 (461)
T ss_dssp             HHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTTC-EEEEEETTEEEEECSSHH-----HHHHHHHHH
T ss_pred             ccchhhcccchhhhhhh---HHHHHHHHHHHHHHHHHHHHhhCCCce-EEeeeeeEEEEEEcCCHH-----HHHHHHHHH
Confidence            88777777777533222   22333333344444443    344321 101233666667776431     134555555


Q ss_pred             HHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769          371 AKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       371 l~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~  415 (419)
                       .++||++.+..    ++.||+.+  ..++++++.++++|++++.++
T Consensus       420 -~~~Gll~~~~~----~~~ir~~PpL~it~~eid~~~~~l~~~l~ef  461 (461)
T d1ohwa_         420 -RNKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADF  461 (461)
T ss_dssp             -HHTTEECEEET----TTEEECCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             -HHCCeEEeeCC----CCEEEEeCCcCCCHHHHHHHHHHHHHHHhcC
Confidence             56799998743    47899987  468999999999999999864

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.72  E-value=1.1e-15  Score=139.64  Aligned_cols=362  Identities=12%  Similarity=0.031  Sum_probs=214.6

Q ss_pred             chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHH
Q 014769           22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAIAD   95 (419)
Q Consensus        22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~   95 (419)
                      ...|..++++=.++     ....|+|--..      -..++.+++++...+.+....      .|+..+-+.+++....+
T Consensus        12 D~ei~~~i~~e~~r-----q~~~l~LiaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~   80 (463)
T d2a7va1          12 DPEMWELLQREKDR-----QCRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQR   80 (463)
T ss_dssp             CHHHHHHHHHHHHH-----HHHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-----HhcCeeEeccC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHH
Confidence            34455555543322     23446665553      235788888877666542222      23444446677776666


Q ss_pred             HHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH--------HhhcC--CEEEEEeccCCC
Q 014769           96 YLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI--------AQRKQ--VEVRHFDLLPER  164 (419)
Q Consensus        96 ~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~--------~~~~g--~~~~~~~~~~~~  164 (419)
                      ..++.++.....-.| +-..+++.|+..++.+|++|||+|+..++...++..-        ....|  .+...+.++++ 
T Consensus        81 ra~~lF~~~~a~w~vNVqp~SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~-  159 (463)
T d2a7va1          81 RALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-  159 (463)
T ss_dssp             HHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTT-
T ss_pred             HHHHHhCCCchhccCCccccccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCC-
Confidence            666666643221112 3456778899999999999999999888776654211        11122  23444444443 


Q ss_pred             CcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCC
Q 014769          165 NWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIV  242 (419)
Q Consensus       165 ~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~  242 (419)
                      +..+|.+++++.+.. +|++|++-.-.+|  ..++   ++++.++|++.|.++++|.+|.... -++..+.|+ .+. + 
T Consensus       160 ~~~IDyd~~~~~a~~~kPklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~-~~a-D-  231 (463)
T d2a7va1         160 TGLIDYNQLALTARLFRPRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-KHA-D-  231 (463)
T ss_dssp             TCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG-GTC-S-
T ss_pred             CCcCcHHHHHHHHhhcCCceEEecccccc--cccC---HHHHHHHhhcccceEEechhhhhHHhhhhhhcChh-hhh-h-
Confidence            457999999887765 5666665443343  2345   8899999999999999999996543 344333333 332 2 


Q ss_pred             cEEEEecCCCcCCCCCceeEEEEeeCCCCccc-------hhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHH
Q 014769          243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ-------KSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFC  313 (419)
Q Consensus       243 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-------~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~  313 (419)
                        ++.+|++|+  ++|.|.|.+.+++...-..       ..++.+++....  ...+++......+.+.++.+.....++
T Consensus       232 --vvt~tTHKT--lrGPrgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk  307 (463)
T d2a7va1         232 --IVTTTTHKT--LRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFR  307 (463)
T ss_dssp             --EEEEESSGG--GCSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHH
T ss_pred             --hhhchhhhh--hcCCCceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHH
Confidence              788899998  6899999999876310000       003556666553  222344444444444444443345677


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----CCC
Q 014769          314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----LKN  388 (419)
Q Consensus       314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~  388 (419)
                      +...++.++.+.|.+.|.+. |+.++........+++++....    .+ -..+++.|++.||.+.--..++     .+.
T Consensus       308 ~Ya~qVv~NAk~La~~L~~~-G~~vv~ggTdnHlvlvdl~~~~----~~-G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~s  381 (463)
T d2a7va1         308 EYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKG----LD-GARAERVLELVSITANKNTCPGDRSAITPG  381 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTT----CC-HHHHHHHHHHTTEECEEECCTTCCCSSSCS
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CCeeecCCCCCceeeeeccccC----CC-HHHHHHHHHhccCccCCccCCCCCCCCCCC
Confidence            88889999999999999987 8875655556677788875432    13 3445666789999886322221     256


Q ss_pred             eEEEEe------ecCHHHHHHHHHHHHHHHH
Q 014769          389 WLRIAF------CAEPSALKDGLGRMKAFCQ  413 (419)
Q Consensus       389 ~~Ris~------~~~~~~l~~~l~~l~~~~~  413 (419)
                      .|||+.      +..++++.++.+.|.+++.
T Consensus       382 GiRiGT~a~TtrG~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         382 GLRLGAPALTSRQFREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             EEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             ceEeCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            899998      2367889988888888774

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.71  E-value=2.5e-15  Score=138.71  Aligned_cols=312  Identities=11%  Similarity=0.074  Sum_probs=201.4

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-CC--CeEEee
Q 014769           61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PG--ANVLLP  137 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~g--d~vlv~  137 (419)
                      .++-.+++.+.++.+.+. .++  -..++++.+++++        +.+++++++++|.|+.++++++.. +|  |+|+++
T Consensus        11 ~~~~~~~v~~~l~~~~~~-~G~--~v~~fE~~~~~~~--------g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p   79 (371)
T d2fnua1          11 DKEDKKAVLEVLNSKQLT-QGK--RSLLFEEALCEFL--------GVKHALVFNSATSALLTLYRNFSEFSADRNEIITT   79 (371)
T ss_dssp             CHHHHHHHHHHHTSSCCS-SSH--HHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred             CHHHHHHHHHHHcCCCcc-CCH--HHHHHHHHHHHHH--------CcCeEEEEecHHHHHHHHHHHhcccCCCCCeeecc
Confidence            355567888888776542 233  4689999999998        345889999999999999999853 34  589999


Q ss_pred             CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769          138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  217 (419)
                      ..+|......+...|+.++.++++++.  ..+.+.++..+.+++++|++++   ..|...+   +.+|.++|+++++++|
T Consensus        80 ~~t~~a~~~ai~~~G~~pv~vDi~~~~--~~~~~~~~~~~~~~t~avi~vh---~~G~~~~---~~~i~~~~~~~~i~lI  151 (371)
T d2fnua1          80 PISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVD---YAGKSVE---VESVQKLCKKHSLSFL  151 (371)
T ss_dssp             SSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEEC---GGGCCCC---HHHHHHHHHHHTCEEE
T ss_pred             cccccccceeeeccCcccccccccccc--cccchhhhhhccchhhcccccc---ccccccc---cccccccccccchhhc
Confidence            999998888899999999999887553  3556778888888899888775   4577777   7889999999999999


Q ss_pred             EcccccccccCCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-------
Q 014769          218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-------  288 (419)
Q Consensus       218 ~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-------  288 (419)
                      +|.+++.+..-...  ....++.    +.+.||  +|.+...+  .|.+++.++       ++.+.++.....       
T Consensus       152 EDaaqa~Ga~~~~~--~~G~~g~----~~~~Sf~~~K~l~~g~--GG~i~t~~~-------~~~~~~~~~~~~g~~~~~~  216 (371)
T d2fnua1         152 SDSSHALGSEYQNK--KVGGFAL----ASVFSFHAIKPITTAE--GGAVVTNDS-------ELHEKMKLFRSHGMLKKDF  216 (371)
T ss_dssp             EECTTCTTCEETTE--ETTSSSS----EEEEECCTTSSSCCSS--CEEEEESCH-------HHHHHHHHHTBTTEEESSS
T ss_pred             cchhhccCceeccc--cCCcccc----cccccccccccccccc--ceEEEeech-------hhhhhcccccccccccccc
Confidence            99999875422111  1222222    444455  67754433  688877652       566666654321       


Q ss_pred             ----------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----CceEEEEeecCc
Q 014769          289 ----------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP----EGSMVTMVKLNP  354 (419)
Q Consensus       289 ----------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----~~g~~~~~~~~~  354 (419)
                                .+..+.+....+...|+     .+++..++-++..+.+.+.|.+.+++.....+    .....+.+.++.
T Consensus       217 ~~~~~~~~G~n~r~sel~Aaigl~qL~-----~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  291 (371)
T d2fnua1         217 FEGEVKSIGHNFRLNEIQSALGLSQLK-----KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQ  291 (371)
T ss_dssp             SCEEESSCCCBCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECG
T ss_pred             cccccccccccccccchhhhhhhhhhh-----hccchhhhhhhhhhhhcccccccccccccccccccccccccccccccc
Confidence                      11123333233333333     24455555556666777778776554422111    111112222332


Q ss_pred             ccccCCCCHHHHHHHHHHhcCeEeecCCCC-----------CC----------CCeEEEEe--ecCHHHHHHHHHHHHHH
Q 014769          355 WLLEDINDDIEFALKLAKEESVIVTPGIYV-----------GL----------KNWLRIAF--CAEPSALKDGLGRMKAF  411 (419)
Q Consensus       355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~----------~~~~Ris~--~~~~~~l~~~l~~l~~~  411 (419)
                      ...   ....++...| +++||.+.+....           ..          ...+.|.+  ..+.++++..++.|.++
T Consensus       292 ~~~---~~r~~~~~~L-~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~  367 (371)
T d2fnua1         292 KFF---TCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKT  367 (371)
T ss_dssp             GGG---GGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             cch---hHHHHHHHHH-HHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHHH
Confidence            110   1234566555 7789988765321           00          13566655  35889999999999999


Q ss_pred             HHHH
Q 014769          412 CQRH  415 (419)
Q Consensus       412 ~~~~  415 (419)
                      ++++
T Consensus       368 ~~~~  371 (371)
T d2fnua1         368 FESF  371 (371)
T ss_dssp             HHHH
T ss_pred             HHcC
Confidence            8864

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.71  E-value=2.6e-15  Score=138.83  Aligned_cols=309  Identities=12%  Similarity=0.055  Sum_probs=192.4

Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCCCCCC
Q 014769           65 EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPGWPY  143 (419)
Q Consensus        65 ~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p~~~~  143 (419)
                      ++++.+.++.+.++..++  -...+++.+++++        +...+++++++|.|+.++++++ .++||+|++|+.+|..
T Consensus         4 ~~~~~~~l~~~~~~~~G~--~~~~fE~~~~~~~--------~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a   73 (374)
T d1o69a_           4 LKYIEEVFKSNYIAPLGE--FVNRFEQSVKDYS--------KSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIA   73 (374)
T ss_dssp             HHHHHHHHHHTTTSCTTH--HHHHHHHHHHHHH--------CCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGG
T ss_pred             HHHHHHHHhcCCcCCCCH--HHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHh
Confidence            366777777665544454  3589999999998        3358999999999999999998 6789999999999999


Q ss_pred             cHHHHhhcCCEEEEEeccCCCCcccChH--HHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccc
Q 014769          144 YEGIAQRKQVEVRHFDLLPERNWEVDLD--AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEV  221 (419)
Q Consensus       144 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~  221 (419)
                      ....+...|..++.+++++... ..+.+  .+.....++++++++++.   .|...+   +.++.++|+++|++||+|.+
T Consensus        74 ~~~~~~~~g~~pv~~Di~~~~~-~~~~~~~~~~~~~~~~~~aii~~~~---~G~~~d---~~~i~~~~~~~~i~vIED~a  146 (374)
T d1o69a_          74 SVAPICYLKAKPVFIDCDETYN-IDVDLLKLAIKECEKKPKALILTHL---YGNAAK---MDEIVEICKENDIVLIEDAA  146 (374)
T ss_dssp             GTHHHHHTTCEEEEECBCTTSS-BCHHHHHHHHHHCSSCCCEEEEECG---GGCCCC---HHHHHHHHHHTTCEEEEECT
T ss_pred             hHHHHhhccceeEecccccccc-cccccccccchhccccccccccccc---ccchhh---hHHHHHHhhccCcchhhhhh
Confidence            9899999999999998875322 23333  344566667888887765   455556   88999999999999999999


Q ss_pred             cccccc-CCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc----------
Q 014769          222 YGHLTF-GSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI----------  288 (419)
Q Consensus       222 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~----------  288 (419)
                      ++.+.. .+.   .+..+++    +.+.||+  |.+...|  .|.+++.++       ++.+.++.....          
T Consensus       147 ~a~g~~~~~~---~~G~~gd----~~~fSf~~~K~l~tge--GG~i~tnn~-------~~~~~~~~~~~~g~~~~~~~~~  210 (374)
T d1o69a_         147 EALGSFYKNK---ALGTFGE----FGVYSYNGNKIITTSG--GGMLIGKNK-------EKIEKARFYSTQARENCLHYEH  210 (374)
T ss_dssp             TCTTCEETTE---ETTSSSS----EEEEECCTTSSSCCSS--CEEEEESCH-------HHHHHHHHHTBTCCCSSSSCCC
T ss_pred             hhhcceECCe---ecCCCCc----eEEEeccCcccccccc--ceeehhhhH-------HHHHhhcccccccccccccccc
Confidence            987432 222   1233332    5566775  7654433  577777652       566666544321          


Q ss_pred             -----ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----CceEEEEeecCcccc-
Q 014769          289 -----YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-----EGSMVTMVKLNPWLL-  357 (419)
Q Consensus       289 -----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----~~g~~~~~~~~~~~~-  357 (419)
                           .+.++.+..+....-|+.     +.+..++-++..+...+.|.+...+. ...+     ..-++..+..+.... 
T Consensus       211 ~~~G~N~rm~ei~Aaig~~qL~~-----l~~~i~~r~~i~~~y~~~L~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~  284 (374)
T d1o69a_         211 LDYGYNYRLSNVLGAIGVAQMEV-----LEQRVLKKREIYEWYKEFLGEYFSFL-DELENSRSNRWLSTALINFDKNELN  284 (374)
T ss_dssp             SSCCCBCBCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHTTTEECC-CCCTTEECCCSSEEEEESCCGGGSC
T ss_pred             ccCCccccccchhhhhhHHHHhh-----hhhhcchhHHHHHHHHhhcccccccc-ccccCCCCChhheeeeecccccccc
Confidence                 112333333333333332     44444444556666677776542221 1011     111222222111000 


Q ss_pred             -------------cCCCCHHHHHHHHHHhcCeEeecCCCCC-------C-------------CCeEEEEe--ecCHHHHH
Q 014769          358 -------------EDINDDIEFALKLAKEESVIVTPGIYVG-------L-------------KNWLRIAF--CAEPSALK  402 (419)
Q Consensus       358 -------------~~~~~~~~~~~~ll~~~gv~v~~g~~~~-------~-------------~~~~Ris~--~~~~~~l~  402 (419)
                                   ........+...| +++||.+.+....-       .             ...+.|.+  ..++++++
T Consensus       285 ~~~~~~~~~~~~~~~~~~r~~l~~~L-~~~gI~~r~~y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~  363 (374)
T d1o69a_         285 ACQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVY  363 (374)
T ss_dssp             CCCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred             ccccccccchhhccchhhHHHHHHHH-HHCCCCEEEeCcchhhChhhhcCCCCCCHHHHHHHhCEEECcCCCCCCHHHHH
Confidence                         0001234455555 78899887643210       0             13466655  35899999


Q ss_pred             HHHHHHHHHHH
Q 014769          403 DGLGRMKAFCQ  413 (419)
Q Consensus       403 ~~l~~l~~~~~  413 (419)
                      ..++.|.++++
T Consensus       364 ~I~~~I~~~lk  374 (374)
T d1o69a_         364 EISKLILKSIK  374 (374)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHHC
Confidence            99999998763

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=3.6e-16  Score=149.01  Aligned_cols=315  Identities=14%  Similarity=0.092  Sum_probs=184.4

Q ss_pred             CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeE---------EeeCCCCCCcHHHHh
Q 014769           79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV---------LLPRPGWPYYEGIAQ  149 (419)
Q Consensus        79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~v---------lv~~p~~~~~~~~~~  149 (419)
                      .|+..++..+|++.+++++        ..+.+++++++++|+..++.+++++||.+         ...+..|........
T Consensus        69 ~Y~~~~~~~~le~~~a~l~--------G~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~  140 (467)
T d2v1pa1          69 AFSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQ  140 (467)
T ss_dssp             CSSSCHHHHHHHHHHHHHT--------CCSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHH
T ss_pred             hhcCCchHHHHHHHHHHHH--------CCCEEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHHH
Confidence            6887778899999999987        34678999999999999999998766543         333444444455667


Q ss_pred             hcCCEEEEEeccCC--------CCcccChHHHHHhhcC----CccEEEEeCCCCc-cccCCCHHHHHHHHHHHHhCCCeE
Q 014769          150 RKQVEVRHFDLLPE--------RNWEVDLDAVEALADK----NTAAMVIINPGNP-CGNVFTYHHLQEIAEMARKLRVMV  216 (419)
Q Consensus       150 ~~g~~~~~~~~~~~--------~~~~~~~~~l~~~~~~----~~~~v~i~~p~np-tG~~~~~~~l~~i~~~~~~~~~~l  216 (419)
                      ..|..+..++.+..        ....+|++.+++.+++    .+.++++...+|. .|.+++.+++++|.++|++||+++
T Consensus       141 ~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l  220 (467)
T d2v1pa1         141 INGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPV  220 (467)
T ss_dssp             HTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCE
T ss_pred             HcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEE
Confidence            77888887765432        1346789999988753    2455666666654 467889999999999999999999


Q ss_pred             EEcccccccc----------cCCCCCCCcc-ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh
Q 014769          217 VADEVYGHLT----------FGSIPYTPMG-LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC  285 (419)
Q Consensus       217 i~De~~~~~~----------~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~  285 (419)
                      ++|+++....          +.+.....+. .+... ..++..|.+|.++.  ...|++++++ +.+.   ......+..
T Consensus       221 ~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~K~~~~--~~gg~i~~~~-~~~~---~~~~~~~~~  293 (467)
T d2v1pa1         221 VMDSARFAENAYFIKQREAEYKDWTIEQITRETYKY-ADMLAMSAKKDAMV--PMGGLLCMKD-DSFF---DVYTECRTL  293 (467)
T ss_dssp             EEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGG-CSEEEEESSSTTCC--SSCEEEEECS-GGGH---HHHHHHHHH
T ss_pred             EEechhhhccccccccccccccCCcccccchhhccc-CCEEEecCCCCCCC--CCceeEEecc-hhhh---hHHHhhccc
Confidence            9999985321          1111110000 01111 12555678887543  3456666544 2211   122222222


Q ss_pred             h------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEee----cCcc
Q 014769          286 L------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVK----LNPW  355 (419)
Q Consensus       286 ~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~----~~~~  355 (419)
                      .      ............++...+....   ..+..++..++.+++.+.|.+. +.. + .+..+....+.    ++..
T Consensus       294 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~-v-~~~~~~~~~~~~~~~~~~~  367 (467)
T d2v1pa1         294 CVVQEGFPTYGGLEGGAMERLAVGLYDGM---NLDWLAYRIAQVQYLVDGLEEI-GVV-C-QQAGGHAAFVDAGKLLPHI  367 (467)
T ss_dssp             HHHTTSSCCCCCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHT-TCC-E-EEECSSCEEEEHHHHSTTS
T ss_pred             ccccccCcchhhhHHHHHHHHHHHhHHhh---hHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCccceeecchhhcCCc
Confidence            1      1112223333333333333221   1223334455667777777775 443 2 12222121111    1111


Q ss_pred             cccCCCCHHHHHHHHHHhcCeEeecCCC-------------CCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHH
Q 014769          356 LLEDINDDIEFALKLAKEESVIVTPGIY-------------VGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------------~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~  415 (419)
                      .... .....+..+++.+.||.......             +.....+|+++.   .++|+|+++++.|++++++.
T Consensus       368 ~~~~-~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~~~~  442 (467)
T d2v1pa1         368 PADQ-FPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA  442 (467)
T ss_dssp             CGGG-CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred             chhh-hhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            1111 12345667777888986432211             112468999873   38899999999999998643

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.68  E-value=2.6e-15  Score=138.22  Aligned_cols=339  Identities=12%  Similarity=0.017  Sum_probs=185.0

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-----CCCCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-----FNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC  116 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~  116 (419)
                      ...||+.| |     .+.+++|+++|.+.+.+..     ....+. +.-..++-+.+.+.+++.++.+ +...|++++|+
T Consensus         3 ~~~~F~pG-P-----~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~-~~~~i~~~~gs   75 (361)
T d2c0ra1           3 RAYNFNAG-P-----AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNP-TGYKVLFIQGG   75 (361)
T ss_dssp             CCEECCSS-S-----CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCC-SSEEEEEESSH
T ss_pred             CCcccCCC-C-----cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEECCC
Confidence            45788777 2     3578999999998764311     000111 1112344444444444445533 33467776665


Q ss_pred             -HHHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769          117 -KQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC  193 (419)
Q Consensus       117 -~~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt  193 (419)
                       +.++.++...+..+|+.+++.......  +...++..|..+..+..+..  ...+++.+++.+...+ .+.   .+|.|
T Consensus        76 ~t~~~ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~---v~~~t  149 (361)
T d2c0ra1          76 ASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEAS--NYMTLPKLQEIQLQDN-AAY---LHLTS  149 (361)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGG--TTCSCCCGGGCCCCTT-EEE---EEEES
T ss_pred             chHHHHHHHhccccCCCceEEEeechhhhhhhhhhhhcCceeeeeccccc--cccchhhhhhhcccCc-ceE---EEEec
Confidence             455567677788888988877654432  45667888888888776433  2456666666655443 322   35678


Q ss_pred             ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc-
Q 014769          194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI-  272 (419)
Q Consensus       194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-  272 (419)
                      |...+   +.++.++|+++|+++++|.+.+.    +..+..+..++     +.+.|.+|.++.+|.-..++....-... 
T Consensus       150 g~~~~---~~~i~~~~~~~~al~~vDavss~----g~~~id~~~~d-----i~~~s~~k~~~~~~~~~~~~~~~~~~~~~  217 (361)
T d2c0ra1         150 NETIE---GAQFKAFPDTGSVPLIGDMSSDI----LSRPFDLNQFG-----LVYAGAQKNLGPSGVTVVIVREDLVAESP  217 (361)
T ss_dssp             EETTT---TEECSSCCCCTTSCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCSSCEEEEEEGGGSSSCC
T ss_pred             cccee---cceEEEeeccCCceEEEEeeccc----cccccccccce-----eEEEecccccccccCcEEEEEhHHhhhCc
Confidence            88888   67788899999999999999986    32333333332     5556789998777643333332211000 


Q ss_pred             ---cchhhHHHHHHhhhccccCCchHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCCC--ce
Q 014769          273 ---FQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEK-TKEDFFCKLIDTLRESAEICYDGVKEIPCIS-CPNKPE--GS  345 (419)
Q Consensus       273 ---~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~p~--~g  345 (419)
                         .....+.. .........++.+.....+...+.. ...........+.+..+..+........... ....++  +.
T Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~  296 (361)
T d2c0ra1         218 KHLPTMLRYDT-YVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSD  296 (361)
T ss_dssp             TTSCGGGCHHH-HHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCS
T ss_pred             ccccccccccc-ccccccccccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccc
Confidence               00001111 1112111222222222222222211 1122333444444445555555444321111 111111  12


Q ss_pred             EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                      ..+.+.+++.     .+..++. ..|+++||.+.+|...  -+.|||++.  .+.|+++++++.|+++.++.
T Consensus       297 ~~~~~~~~~~-----~~~~~~~-~~L~~~GI~~~~G~~~--~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~~  360 (361)
T d2c0ra1         297 MNITFRLASE-----ELEKEFV-KASEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRSR  360 (361)
T ss_dssp             SEEEEECSCH-----HHHHHHH-HHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCc-----ccHHHHH-HHHHHCCCEEecCCCc--CCeEEEEecCCCCHHHHHHHHHHHHHHHHhc
Confidence            2344455532     1334555 5558899999887532  235999993  58999999999999877653

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=1.2e-14  Score=133.51  Aligned_cols=336  Identities=10%  Similarity=-0.067  Sum_probs=182.7

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-----CCC-C----CCCHHHHHHHHHHHHhhCCCCCC-CCcEE
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-----YAT-N----SGIPPARRAIADYLSRDLPYKLS-ADDVY  111 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-----Y~~-~----~g~~~lr~~ia~~l~~~~~~~~~-~~~i~  111 (419)
                      ++.||+-|-      ...|++|+++|.+.+.+....+     .+. .    .-+.+.|+.|++++      +.+ +..|+
T Consensus         1 ~~~nF~pGP------~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~------~~~~~~~v~   68 (360)
T d1bjna_           1 QIFNFSSGP------AMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLL------NVPSNYKVL   68 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEE
T ss_pred             CeEEeCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHh------CCCCCCEEE
Confidence            367887772      3578999999998775321100     011 0    11456777777777      333 34678


Q ss_pred             EcccHHHHHHHHH-HHhcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC
Q 014769          112 VTLGCKQAVEVIL-SVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN  188 (419)
Q Consensus       112 ~t~g~~~al~~~~-~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~  188 (419)
                      +++|++++...+. ..+..+++.+++....+...  ...++..|...........  ...+.+.++..+..+++.+.+++
T Consensus        69 ~~~gs~t~~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~v~~  146 (360)
T d1bjna_          69 FCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTV--DGLRAVKPMREWQLSDNAAYMHY  146 (360)
T ss_dssp             EESSHHHHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEE--TTEEEECCGGGCCCCSSCSCEEE
T ss_pred             EECCchHHHHhhhhhcccccccccceecccchhhhhHHHHhhcCccceeeccccC--CCcchhhhhhhhccCCceeEEEe
Confidence            8777766655554 45566778888777666543  3444555555544443222  23455555666677788888888


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      .+|-||...+   .+.+.  ++.+++.+++|.+.+...      .++....   ..+.+.|.+|.++.|+.-.+++....
T Consensus       147 ~~~~t~~~~~---~~~i~--~~~~~~~v~vDa~~~~~~------~~vd~~~---~dv~~~ss~k~~~~~~~~~~~~~~~~  212 (360)
T d1bjna_         147 CPNETIDGIA---IDETP--DFGADVVVAADFSSTILS------RPIDVSR---YGVIYAGAQKNIGPAGLTIVIVREDL  212 (360)
T ss_dssp             CSEETTTTEE---CCCCC--CCCTTCCEEEECTTTTTS------SCCCGGG---CSEEEEETTTTTSSTTCEEEEEEGGG
T ss_pred             cccccccCcc---cccee--cccccceeeeeeeccccc------eeeeecc---ceeEEEEcccccccCCCceeEeeehh
Confidence            8899998876   33333  466788999998887622      1222222   22677788999766554444433322


Q ss_pred             CCCcc----chhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--
Q 014769          269 PNGIF----QKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP--  342 (419)
Q Consensus       269 ~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--  342 (419)
                      .....    .................+.......+....+........+....+.++....+...+...........+  
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (360)
T d1bjna_         213 LGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRN  292 (360)
T ss_dssp             CSCCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGG
T ss_pred             hhhccccCCcchhhHHHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCccc
Confidence            11100    000111111111121222222222222222221112334444444555555555554443222111111  


Q ss_pred             -CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769          343 -EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH  415 (419)
Q Consensus       343 -~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~  415 (419)
                       ..+ .+.+.+++.     .+..++... ++++||.+..|...  -+.||+|+.  .++|+++++++.|+++.+++
T Consensus       293 rs~~-v~~f~~~~~-----~~~~~~~~~-l~~~Gi~~~~G~~~--~g~~Ris~~~~~t~edV~~li~~l~e~~~~~  359 (360)
T d1bjna_         293 RSRM-NVPFQLADS-----ALDKLFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPLEGVKALTDFMVEFERRH  359 (360)
T ss_dssp             BCSS-EEEEEESSG-----GGHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccce-EEEEEcCCc-----ccHHHHHHH-HHHCCCEeecCCCc--cCeEEEEecCCCCHHHHHHHHHHHHHHHHHc
Confidence             223 333456542     234556554 57889998887422  245999993  58999999999999977664

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.56  E-value=2.1e-13  Score=125.06  Aligned_cols=331  Identities=14%  Similarity=0.018  Sum_probs=173.2

Q ss_pred             CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-----CCCC-----CCCCHHHHHHHHHHHHhhCCCCCCCC-cEE
Q 014769           43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-----CYAT-----NSGIPPARRAIADYLSRDLPYKLSAD-DVY  111 (419)
Q Consensus        43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~Y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~  111 (419)
                      .+.||+.|-      .+.|++|++++.+.+-+....     ..+.     ..-+.+.|+.|++++      +.+.+ .|+
T Consensus         3 ~~~nF~pGP------~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~------~~~~~~~i~   70 (360)
T d1w23a_           3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL------QIPNDYQIL   70 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEE
T ss_pred             ceeEeCCCC------cCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHh------CCCCCCEEE
Confidence            567888883      356899999998876331000     0000     112356777788877      44444 678


Q ss_pred             EcccHHHHHHHHHHH-hcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC
Q 014769          112 VTLGCKQAVEVILSV-LARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN  188 (419)
Q Consensus       112 ~t~g~~~al~~~~~~-l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~  188 (419)
                      +++|++++...+... +..+++.+++....+..  +...+...+............  ...++.+...... ..   +++
T Consensus        71 ~~~gt~~~~~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~---~~~  144 (360)
T d1w23a_          71 FLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANS--YQSIPDFSEFQLN-EN---DAY  144 (360)
T ss_dssp             EESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGT--SCSCCCGGGCCCC-TT---EEE
T ss_pred             EeCCcHHHHHHHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeecccccc--ccchhhhhhcccc-cc---cce
Confidence            888887777655554 45577888887765543  334455556555554432211  2233444333332 22   233


Q ss_pred             CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769          189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND  268 (419)
Q Consensus       189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  268 (419)
                      ..|.||...+   +.+|.++|+++|+++|+|.+++...    ....+..++     +.+.+++|.++.+|. .|+++.+.
T Consensus       145 ~~~~tg~~~~---~~~i~~~~~~~g~l~ivDavqs~g~----~~id~~~~~-----vd~~~~~~~k~~~~~-~~~~~~~~  211 (360)
T d1w23a_         145 LHITSNNTIY---GTQYQNFPEINHAPLIADMSSDILS----RPLKVNQFG-----MIYAGAQKNLGPSGV-TVVIVKKD  211 (360)
T ss_dssp             EEEESEETTT---TEECSSCCCCCSSCEEEECTTTTTS----SCCCGGGCS-----EEEEETTTTTSCTTC-EEEEEEHH
T ss_pred             eEecCCcccc---ceeeeeccccceeeEEeeccccccc----ccccccccc-----ceEEeeccccccCCc-ceeeEech
Confidence            3567899888   7888999999999999999999733    333343332     445577777655543 34443321


Q ss_pred             C----CCcc-chhhHHHHHHhhhccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CCCC
Q 014769          269 P----NGIF-QKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCIS-CPNK  341 (419)
Q Consensus       269 ~----~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~  341 (419)
                      .    .... .......... ......++......+....+.... .........+.+................. ....
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (360)
T d1w23a_         212 LLNTKVEQVPTMLQYATHIK-SDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAE  290 (360)
T ss_dssp             HHCSCCTTCCGGGCHHHHHH-TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSC
T ss_pred             hhhcccccCCcchhhhhhhh-hhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCC
Confidence            0    0000 0001111111 111122232222222222211111 11122222233333333333333321111 0111


Q ss_pred             C---CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769          342 P---EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       342 p---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                      +   ..+ .+.+.+++.     .++.++.. .|.++||.+..|....  +.+|+|+.  .+.|+++.+++.++++.+.
T Consensus       291 ~~~rS~~-vvsf~i~~~-----~~~~~~~~-~l~~~GI~~~~G~~~~--ggiRiS~~~~~t~e~V~~Li~~~~~~~~~  359 (360)
T d1w23a_         291 KGSRSLM-NVTFNLRNE-----ELNQQFLA-KAKEQGFVGLNGHRSV--GGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             GGGBCSS-EEEEECSSH-----HHHHHHHH-HHHHTTEESCBCCTTT--CSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             hhhccee-EEEEEcCCC-----ccHHHHHH-HHHHCCCeeeeCCCcc--CcEEEEeeCCCCHHHHHHHHHHHHHHHhc
Confidence            1   122 344556532     13456654 4578899988875432  45999983  4899999999999887653

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.37  E-value=4.2e-10  Score=103.41  Aligned_cols=304  Identities=18%  Similarity=0.138  Sum_probs=184.5

Q ss_pred             CCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-CCCeEEeeCCCCCCcH----HHHhhc
Q 014769           79 CYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPYYE----GIAQRK  151 (419)
Q Consensus        79 ~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~vlv~~p~~~~~~----~~~~~~  151 (419)
                      .|.|  ++|.-++.-.+..++.+.-|  .+.-+.-.-.|+++....++.+... ..+++++..-.++...    ..++..
T Consensus        97 PyqpE~sQG~Lq~l~e~q~~l~eltG--md~~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~  174 (437)
T d1wyua1          97 PYQPEVSQGVLQATFEYQTMIAELAG--LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAV  174 (437)
T ss_dssp             CCSGGGCHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhC--CCccccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccc
Confidence            4444  56665555555555555444  4445556667888888777766543 4578999988887543    345677


Q ss_pred             CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC
Q 014769          152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP  231 (419)
Q Consensus       152 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  231 (419)
                      |++++.++.+..   ..+.++    +.+++.++++.+||. .|..-+   ++++.+++++.|.+++.|..-..  ..+  
T Consensus       175 g~~vv~v~~~~~---~~~~~~----~~~~~Aavmi~~Pnt-~G~~ed---~~~i~~~~h~~G~l~~~~ad~~a--l~~--  239 (437)
T d1wyua1         175 GAKLLTLPLEGG---RTPLPE----VGEEVGAVVVQNPNF-LGALED---LGPFAEAAHGAGALFVAVADPLS--LGV--  239 (437)
T ss_dssp             TCEEEEECCBTT---BCCCCC----CCTTEEEEEEESSCT-TSBCCC---HHHHHHHHHHTTCEEEEECCTTG--GGT--
T ss_pred             eeeEEeeecccc---cchhhh----hccceeEEEEccccc-cccccc---hHHHHHHhhhccceEEeeechhh--hhc--
Confidence            999998876432   223222    456788899999976 687754   88999999999998776643221  111  


Q ss_pred             CCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC------Cccc---h-----------hhHHHHHHhhhc
Q 014769          232 YTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN------GIFQ---K-----------SGIIDSIKDCLS  287 (419)
Q Consensus       232 ~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~------~~~~---~-----------~~~~~~l~~~~~  287 (419)
                      ..+...++.|   |++++ +|.|+.|    |...|++.+++.-      .+..   +           ..--+.++....
T Consensus       240 l~~Pg~~GaD---i~~g~-~q~fg~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrReka  315 (437)
T d1wyua1         240 LKPPGAYGAD---IAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKA  315 (437)
T ss_dssp             BCCHHHHTCS---EEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGS
T ss_pred             cccccccccc---eEeec-cceeccccCCCcCccccccccchhhccccccccccccccCCcccceeeccccccccccccc
Confidence            1222344444   66666 6665543    5668898887521      0000   0           000122222221


Q ss_pred             c--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE-EEeecCcccccCCCCHH
Q 014769          288 I--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV-TMVKLNPWLLEDINDDI  364 (419)
Q Consensus       288 ~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~-~~~~~~~~~~~~~~~~~  364 (419)
                      .  ..+.+.+....+..++.....+.+++..++...+.+++.+.|.+++++. ...+...+. +.++++       .+..
T Consensus       316 tsnict~q~l~a~~a~~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~~~g~~-~~~~~~~f~ef~v~~~-------~~~~  387 (437)
T d1wyua1         316 KSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVR-PFTPKPFFNEFALALP-------KDPE  387 (437)
T ss_dssp             SCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCE-ECSCSSBCSEEEEECS-------SCHH
T ss_pred             ccchhhHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHHHHHHhhhcCCee-ccCCCCeeeEEEEECC-------CCHH
Confidence            1  1223333333334444444468899999999999999999999987876 323332221 233443       2566


Q ss_pred             HHHHHHHHhcCeEeec-CCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769          365 EFALKLAKEESVIVTP-GIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC  412 (419)
Q Consensus       365 ~~~~~ll~~~gv~v~~-g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~  412 (419)
                      ++.++| .++|+.... -..+..++.+.+++.  .+.++|+.+++.|++++
T Consensus       388 ~i~k~L-~d~G~~~~~~~~~~~~~~~lli~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         388 AVRRAL-AERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             HHHHHH-HHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHH-HhCCCCCCcccccCCCCCeEEEecCCCCCHHHHHHHHHHHHHhC
Confidence            777776 567985311 111223678999994  57899999999998864

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.22  E-value=7.5e-09  Score=96.17  Aligned_cols=317  Identities=16%  Similarity=0.064  Sum_probs=188.3

Q ss_pred             hHHHHHHHHHHHhCCCCCCCCC---CCCC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---CC
Q 014769           61 AVEAEDAIVDAVRSGKFNCYAT---NSGI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA---RP  130 (419)
Q Consensus        61 ~~~v~~a~~~~~~~~~~~~Y~~---~~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---~~  130 (419)
                      +|.+.+.+.+-.  -.++.|.|   ++|.    -++...|++..      +.+..+.-.-.|+++.-..++.+..   +.
T Consensus        78 ~P~v~~~~~~~~--TaYTPYQPaEiSQG~LQalfEfQtmi~eLT------GMdvaNaS~yDGatA~aeA~~ma~r~~~~~  149 (471)
T d1wyub1          78 NPKLHEEAARLF--ADLHPYQDPRTAQGALRLMWELGEYLKALT------GMDAITLEPAAGAHGELTGILIIRAYHEDR  149 (471)
T ss_dssp             CCHHHHHHHHTT--SSCCTTSCGGGCHHHHHHHHHHHHHHHHHH------TCSEEECCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             CcchhhhHHHHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHh------CCCccccccchHHHHHHHHHHHHHHHhhhc
Confidence            456666554321  12334554   3443    45666666666      5555566667788777666655542   12


Q ss_pred             C----CeEEeeCCCCCC-cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHH
Q 014769          131 G----ANVLLPRPGWPY-YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI  205 (419)
Q Consensus       131 g----d~vlv~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  205 (419)
                      +    ..+++..+.+.. ........+..++.++..  .....+.+.+......+...+++.+|++..+..-.   .+++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~v~v~~p~~~g~~e~~---~~~~  224 (471)
T d1wyub1         150 GEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNPNTLGLFERR---ILEI  224 (471)
T ss_dssp             TCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCCTT---HHHH
T ss_pred             ccccccccccCCcccccceeeeeecccceeeccccc--ccccccchhhhhhhhccccceeeccCCCcccccch---hhhh
Confidence            2    344555555554 344455566666666643  34467888888888777888899999886655444   6788


Q ss_pred             HHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC----CCceeEEEEeeCCCCccchhhHHHH
Q 014769          206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV----PGWRFGWLVTNDPNGIFQKSGIIDS  281 (419)
Q Consensus       206 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~  281 (419)
                      .+++++.+..+++|.+-......-..+   ...+.+   +++.+.++.+|.    .|.-+|++.+++        ++++.
T Consensus       225 ~~~~h~~g~~~~~~~~~~~~~~~l~~p---~~~g~d---iv~vg~~q~~G~P~~~GGP~~G~~a~~~--------~~~R~  290 (471)
T d1wyub1         225 SRLCKEAGVQLYYDGANLNAIMGWARP---GDMGFD---VVHLNLHKTFTVPHGGGGPGSGPVGVKA--------HLAPY  290 (471)
T ss_dssp             HHHHHHHTCEEEEEGGGGGGTTTTCCH---HHHTCS---EEECCTTTTTCCCCTTSCCCCCCEEECG--------GGGGG
T ss_pred             HHHHHhccccccccccchhhhhhcccc---Cccccc---ccccccccccccccccccccccceeehh--------hhhcc
Confidence            888889888888776544322111111   111222   444455665544    356689998865        23322


Q ss_pred             HHh----------------hhc----cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769          282 IKD----------------CLS----IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK  341 (419)
Q Consensus       282 l~~----------------~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  341 (419)
                      +-.                ..+    ...+.+.+...++..++.....+.+++..++..++..++.+.|+. +|++.. .
T Consensus       291 ~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~-~G~~~~-~  368 (471)
T d1wyub1         291 LPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE-KGYRVP-Y  368 (471)
T ss_dssp             CCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCBCS-S
T ss_pred             CCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhh-cCceec-c
Confidence            210                000    112233344444444555555789999999999999999999976 487733 2


Q ss_pred             CCceEE--EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769          342 PEGSMV--TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFC--AEPSALKDGLGRMKAFCQR  414 (419)
Q Consensus       342 p~~g~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~  414 (419)
                      + +.+|  +.++++..     .+..++.++|+ ++|+.- +...|-  ..+.+-+++.  .++++||.+++.|++++++
T Consensus       369 ~-~~ff~EFvv~~~~~-----~~~~~i~k~L~-~~G~~~-~~~~~p~~~~~~llv~vTE~~tkedID~lv~aL~~i~~e  439 (471)
T d1wyub1         369 D-GPSMHEFVAQPPEG-----FRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK  439 (471)
T ss_dssp             C-SSCCSCEEEBCSTT-----CCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred             C-cceeeEEeecCCCC-----CCHHHHHHHHH-HcCCCC-CcccCcCCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            2 2222  23444421     24567777775 568853 222222  2567888884  6889999999999998875

>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Bacterial cell division inhibitor SulA
domain: Hypothetical protein PA3008
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.09  E-value=0.6  Score=33.07  Aligned_cols=104  Identities=9%  Similarity=0.034  Sum_probs=66.9

Q ss_pred             cEEEcccHHHHHHHHHHHh---cCC--CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769          109 DVYVTLGCKQAVEVILSVL---ARP--GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA  183 (419)
Q Consensus       109 ~i~~t~g~~~al~~~~~~l---~~~--gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  183 (419)
                      ++.....+.+.+..++-.+   ...  +.-|+..+|-+..|...+...|++...+-+....+..-....++++++.....
T Consensus         6 el~~~~~~~~~l~LL~P~L~~l~~~~~~rwi~wI~Pp~~p~a~~L~~~Gi~~~rll~v~~~~~~d~lwa~EqaL~sg~~~   85 (119)
T d1ofux_           6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH   85 (119)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred             eecccCCcHHHHHHHHHHHHHHHhcCCCcEEEEEcCCCccCHHHHHHcCCCCCeEEEEeCCChHHHHHHHHHHHhcCCcc
Confidence            3455555555555555444   332  34588889889999999999998754333322222122345567888878878


Q ss_pred             EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769          184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV  217 (419)
Q Consensus       184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  217 (419)
                      .++..+.+     ++...++++--.|++.+...+
T Consensus        86 aVl~w~~~-----l~~~~~RRLqlAA~~g~t~~~  114 (119)
T d1ofux_          86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQSL  114 (119)
T ss_dssp             EEEECCSS-----CCHHHHHHHHHHHHHHTCEEE
T ss_pred             EEEEcCCC-----CChHHHHHHHHHHHhcCCEEE
Confidence            88887743     567778888877888776544