Citrus Sinensis ID: 014782

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
MLTLNLIPSPSPVAFSKSNPINASNPNLLSRAQNQRNLNCAFAFLNKPTSHFSKVPNFSRIHGYPLGFYSSITSQIQDSGVSSSKSRSFLAKAAAESNPEPEGETTEVSKPNKTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATAKKKVEGEKKN
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccEEEcccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHEEHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mltlnlipspspvafsksnpinasnpnlLSRAQNQRNLNCafaflnkptshfskvpnfsrihgyplgfyssitsqiqdsgvssskSRSFLAKAaaesnpepegettevskpnkTLKLALVFGFWYFQNIVFNIynkkalnvfpfpwLLASFQLFAGSVWMLVLWSlklqpcpkiskpfIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSsflgdiyplkVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYskkslgdfkevnglnlYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHlynqssyqalddispltfsvgNTMKRVVVIVASILVfrnpvrplnALGSAIAIFGTFLYSQATAKKKVEGEKKN
mltlnlipspspvafsksnpINASNPNLLSRAQNQRNLNCAFAFLNKPTSHFSKVPNFSRIHGYPLGFYSSITSQIQDSGVSSSKSRSFLAKAaaesnpepegettevskpnkTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATakkkvegekkn
MLTLNLIPSPSPVAFSKSNPINASNPNLLSRAQNQRNLNCAFAFLNKPTSHFSKVPNFSRIHGYPLGFYSSITSQIQDSGVSSSKSRSFLAKAAAESNPEPEGETTEVSKPNKTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATAKKKVEGEKKN
************************************NLNCAFAFLNKPTSHFSKVPNFSRIHGYPLGFYSSIT****************************************TLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQ*************
*****************************************************************************************************************TLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLG***EVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLY***************
MLTLNLIPSPSPVAFSKSNPINASNPNLLSRAQNQRNLNCAFAFLNKPTSHFSKVPNFSRIHGYPLGFYSSITS************************************PNKTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATA**********
*LTLNLIPSPSPVAFSKSNPINA*************************************************************************************SKPNKTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATAKKKVE*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiii
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MLTLNLIPSPSPVAFSKSNPINASNPNLLSRAQNQRNLNCAFAFLNKPTSHFSKVPNFSRIHGYPLGFYSSITSQIQDSGVSSSKSRSFLAKAAAESNPEPEGETTEVSKPNKTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATAKKKVEGEKKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query419 2.2.26 [Sep-21-2011]
Q9LF61417 Xylulose 5-phosphate/phos yes no 0.964 0.968 0.692 1e-158
Q9M5A9388 Glucose-6-phosphate/phosp no no 0.749 0.809 0.529 8e-86
Q94B38388 Glucose-6-phosphate/phosp no no 0.844 0.912 0.464 4e-84
P11869404 Triose phosphate/phosphat N/A no 0.799 0.829 0.419 8e-65
P52177407 Triose phosphate/phosphat N/A no 0.761 0.783 0.434 6e-64
Q84QU8407 Phosphoenolpyruvate/phosp no no 0.742 0.764 0.446 2e-63
Q9FTT3417 Triose phosphate/phosphat no no 0.744 0.748 0.432 3e-63
P29463414 Triose phosphate/phosphat N/A no 0.715 0.724 0.445 4e-63
Q9ZSR7410 Triose phosphate/phosphat no no 0.799 0.817 0.411 9e-63
P49131408 Triose phosphate/phosphat N/A no 0.699 0.718 0.453 3e-62
>sp|Q9LF61|XPT_ARATH Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=2 SV=1 Back     alignment and function desciption
 Score =  557 bits (1435), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 299/432 (69%), Positives = 338/432 (78%), Gaps = 28/432 (6%)

Query: 1   MLTLNLIPSPSPVAFSKSNPINASNPNLLSRAQNQRNLNCAFAFLNKPTSH-----FSKV 55
           M++LNL PS +P    K+              Q    L+       KP +H      S +
Sbjct: 1   MISLNLSPSLNPGLLHKTR-----------TCQQPTRLSALLVTNPKPFNHRHPLGLSPI 49

Query: 56  PNFS--RIHGYPLGFYSSITSQIQDSGVSSSKSRSFLAKAAAESNPEPE---GETTEVSK 110
           PN     +   PL    S+T+    SG S  K RS  A  +++SNP+ +   GE  +  K
Sbjct: 50  PNLQIRDVSAKPL---LSLTNPESSSGFSR-KPRSIAAVGSSDSNPDEKSDLGEAEKKEK 105

Query: 111 PNKTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQP 170
             KTL+L +VFG WYFQNIVFNI+NKKALNVFP+PWLLASFQLFAGS+WMLVLWS KL P
Sbjct: 106 KAKTLQLGIVFGLWYFQNIVFNIFNKKALNVFPYPWLLASFQLFAGSIWMLVLWSFKLYP 165

Query: 171 CPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIY 230
           CPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVF+V+FSS LGD Y
Sbjct: 166 CPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSLLGDSY 225

Query: 231 PLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGL 290
           PL VWLSILPIV+GCSLAAVTEVSFN GGL GAMISN+GFVLRNIYSK+SL  FKE++GL
Sbjct: 226 PLAVWLSILPIVMGCSLAAVTEVSFNLGGLSGAMISNVGFVLRNIYSKRSLQSFKEIDGL 285

Query: 291 NLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQS 350
           NLYG I+I+SL YLFPVAIFVEGS W+ GYH AIA+VG PSTFYFWVLLSG+FYHLYNQS
Sbjct: 286 NLYGCISILSLLYLFPVAIFVEGSHWVPGYHKAIASVGTPSTFYFWVLLSGVFYHLYNQS 345

Query: 351 SYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATAK 410
           SYQALD+ISPLTFSVGNTMKRVVVI++++LVFRNPVRPLNALGSAIAIFGTFLYSQATAK
Sbjct: 346 SYQALDEISPLTFSVGNTMKRVVVIISTVLVFRNPVRPLNALGSAIAIFGTFLYSQATAK 405

Query: 411 KK---VEGEKKN 419
           KK   V G+KKN
Sbjct: 406 KKKIEVGGDKKN 417
Sugar phosphate/phosphate translocator that transports inorganic phosphate, triose phosphate, 3-phosphoglycerate, xylulose 5-phosphate (Xul-5-P) and to a lesser extent ribulose 5-phosphate. Does not transport ribose 5-phosphate or hexose phosphates. Provides cytosolic Xul-5-P to the chloroplast, where it is used as an intermediate in the plastidic pentose phosphate pathways.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1 Back     alignment and function description
>sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2 Back     alignment and function description
>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Back     alignment and function description
>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|Q84QU8|PPT2_ORYSJ Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1 Back     alignment and function description
>sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
359489082427 PREDICTED: xylulose 5-phosphate/phosphat 0.968 0.950 0.738 1e-173
255565998435 Glucose-6-phosphate/phosphate translocat 0.983 0.947 0.760 1e-173
224126073316 predicted protein [Populus trichocarpa] 0.749 0.993 0.866 1e-157
356537276419 PREDICTED: xylulose 5-phosphate/phosphat 0.959 0.959 0.715 1e-156
15238003417 Nucleotide/sugar transporter family prot 0.964 0.968 0.692 1e-156
13937218417 AT5g17630/K10A8_110 [Arabidopsis thalian 0.964 0.968 0.687 1e-155
12060553417 phosphate/pentose phosphate translocator 0.964 0.968 0.687 1e-154
297807785417 hypothetical protein ARALYDRAFT_909761 [ 0.947 0.952 0.681 1e-153
255565996515 Glucose-6-phosphate/phosphate translocat 0.961 0.782 0.700 1e-151
356555325419 PREDICTED: LOW QUALITY PROTEIN: xylulose 0.926 0.926 0.692 1e-149
>gi|359489082|ref|XP_002264736.2| PREDICTED: xylulose 5-phosphate/phosphate translocator, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 322/436 (73%), Positives = 358/436 (82%), Gaps = 30/436 (6%)

Query: 1   MLTLNLIPSPSPVAFSKSNPINASNPNLLSRAQNQRNLNCAFAFLNKPTSHFSKVPNFSR 60
           MLTLNL+P  S +  SK    +  + N L RAQNQ + +      NKP S    + N SR
Sbjct: 1   MLTLNLVPC-SNITLSKPKS-HQYSINALHRAQNQGDFHLPRGLFNKPKSQV--ISNLSR 56

Query: 61  IHGYPLGFYSSITSQIQD---------------SGVSSSKSRSFLAKAAAESNPEPEGET 105
           IHGYP GF +  +SQI D               SGV + K RS++AKAA     E EGE+
Sbjct: 57  IHGYPFGFCAKPSSQIHDTSAKIKSLDTTGEHPSGVGA-KPRSWVAKAA-----EFEGES 110

Query: 106 TEVSKPNKTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWS 165
            EVSKPNKTL+L +VFG WYFQNIVFNIYNKK LN+FPFPWLLASFQLF GSVWML+LWS
Sbjct: 111 -EVSKPNKTLQLGIVFGMWYFQNIVFNIYNKKVLNLFPFPWLLASFQLFVGSVWMLILWS 169

Query: 166 LKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSF 225
            KLQPCPKISKPFI+ALLGPALFHTIGHISACVSFSKVAVSFTHVIKS+EPVF+V+FS+ 
Sbjct: 170 FKLQPCPKISKPFIVALLGPALFHTIGHISACVSFSKVAVSFTHVIKSSEPVFSVIFSTI 229

Query: 226 LGD-IYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDF 284
           LGD  YPL+VWLSILPIVLGCSLAAVTEVSFN  GLWGA+ISN+GFVLRNIYSK+SL  F
Sbjct: 230 LGDNTYPLRVWLSILPIVLGCSLAAVTEVSFNLQGLWGALISNVGFVLRNIYSKRSLESF 289

Query: 285 KEVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFY 344
           KEVNGLNLYGWI+IISL YLFPVAIFVEG+QWI+GYH AI AVGKP+TFY WV+LSG+FY
Sbjct: 290 KEVNGLNLYGWISIISLLYLFPVAIFVEGTQWIEGYHRAIQAVGKPTTFYIWVMLSGVFY 349

Query: 345 HLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLY 404
           HLYNQSSYQALDDISPLTFSVGNTMKRVVVIVA+ILVFRNPV+PLNALGSAIAIFGTFLY
Sbjct: 350 HLYNQSSYQALDDISPLTFSVGNTMKRVVVIVATILVFRNPVKPLNALGSAIAIFGTFLY 409

Query: 405 SQATAK---KKVEGEK 417
           SQAT+K   KK+EGEK
Sbjct: 410 SQATSKKSPKKIEGEK 425

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255565998|ref|XP_002523987.1| Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor, putative [Ricinus communis] gi|223536714|gb|EEF38355.1| Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224126073|ref|XP_002319749.1| predicted protein [Populus trichocarpa] gi|222858125|gb|EEE95672.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356537276|ref|XP_003537155.1| PREDICTED: xylulose 5-phosphate/phosphate translocator, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|15238003|ref|NP_197265.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana] gi|75174059|sp|Q9LF61.1|XPT_ARATH RecName: Full=Xylulose 5-phosphate/phosphate translocator, chloroplastic; Short=Xul-5-P/phosphate translocator; Flags: Precursor gi|9755788|emb|CAC01907.1| glucose 6 phosphate/phosphate translocator-like protein [Arabidopsis thaliana] gi|332005067|gb|AED92450.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|13937218|gb|AAK50101.1|AF372964_1 AT5g17630/K10A8_110 [Arabidopsis thaliana] gi|23308371|gb|AAN18155.1| At5g17630/K10A8_110 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|12060553|gb|AAG48163.1|AF209211_1 phosphate/pentose phosphate translocator [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297807785|ref|XP_002871776.1| hypothetical protein ARALYDRAFT_909761 [Arabidopsis lyrata subsp. lyrata] gi|297317613|gb|EFH48035.1| hypothetical protein ARALYDRAFT_909761 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255565996|ref|XP_002523986.1| Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis] gi|223536713|gb|EEF38354.1| Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356555325|ref|XP_003545984.1| PREDICTED: LOW QUALITY PROTEIN: xylulose 5-phosphate/phosphate translocator, chloroplastic [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
TAIR|locus:2151381417 AT5G17630 "AT5G17630" [Arabido 0.971 0.976 0.696 4.2e-150
TAIR|locus:2036778388 GPT2 "glucose-6-phosphate/phos 0.847 0.914 0.485 2.6e-86
TAIR|locus:2160175388 GPT1 "glucose 6-phosphate/phos 0.749 0.809 0.532 2.6e-86
TAIR|locus:2161423415 APE2 "ACCLIMATION OF PHOTOSYNT 0.797 0.804 0.415 2e-63
UNIPROTKB|Q84QU8407 PPT2 "Phosphoenolpyruvate/phos 0.742 0.764 0.446 3e-62
TAIR|locus:2084203383 PPT2 "phosphoenolpyruvate (pep 0.751 0.822 0.421 9.9e-62
UNIPROTKB|Q69VR7408 PPT1 "Phosphoenolpyruvate/phos 0.732 0.752 0.432 2.4e-60
UNIPROTKB|Q5VQL3393 PPT3 "Phosphoenolpyruvate/phos 0.775 0.826 0.407 7.3e-59
TAIR|locus:2145944408 CUE1 "CAB UNDEREXPRESSED 1" [A 0.937 0.963 0.379 1.7e-57
GENEDB_PFALCIPARUM|PFE0410w342 PFE0410w "triose or hexose pho 0.684 0.839 0.374 7.4e-50
TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1465 (520.8 bits), Expect = 4.2e-150, P = 4.2e-150
 Identities = 299/429 (69%), Positives = 339/429 (79%)

Query:     1 MLTLNLIPSPSPVAFSKSNPINASNPNLLSR--AQNQRNLNCAFAFLNKPTSHFSKVPNF 58
             M++LNL PS +P    K+       P  LS     N +  N      ++     S +PN 
Sbjct:     1 MISLNLSPSLNPGLLHKTR--TCQQPTRLSALLVTNPKPFN------HRHPLGLSPIPNL 52

Query:    59 S--RIHGYPLGFYSSITSQIQDSGVSSSKSRSFLAKAAAESNPEPE---GETTEVSKPNK 113
                 +   PL    S+T+    SG S  K RS  A  +++SNP+ +   GE  +  K  K
Sbjct:    53 QIRDVSAKPL---LSLTNPESSSGFSR-KPRSIAAVGSSDSNPDEKSDLGEAEKKEKKAK 108

Query:   114 TLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPK 173
             TL+L +VFG WYFQNIVFNI+NKKALNVFP+PWLLASFQLFAGS+WMLVLWS KL PCPK
Sbjct:   109 TLQLGIVFGLWYFQNIVFNIFNKKALNVFPYPWLLASFQLFAGSIWMLVLWSFKLYPCPK 168

Query:   174 ISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSSFLGDIYPLK 233
             ISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVF+V+FSS LGD YPL 
Sbjct:   169 ISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSLLGDSYPLA 228

Query:   234 VWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLY 293
             VWLSILPIV+GCSLAAVTEVSFN GGL GAMISN+GFVLRNIYSK+SL  FKE++GLNLY
Sbjct:   229 VWLSILPIVMGCSLAAVTEVSFNLGGLSGAMISNVGFVLRNIYSKRSLQSFKEIDGLNLY 288

Query:   294 GWITIISLFYLFPVAIFVEGSQWIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSYQ 353
             G I+I+SL YLFPVAIFVEGS W+ GYH AIA+VG PSTFYFWVLLSG+FYHLYNQSSYQ
Sbjct:   289 GCISILSLLYLFPVAIFVEGSHWVPGYHKAIASVGTPSTFYFWVLLSGVFYHLYNQSSYQ 348

Query:   354 ALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATAKKK- 412
             ALD+ISPLTFSVGNTMKRVVVI++++LVFRNPVRPLNALGSAIAIFGTFLYSQATAKKK 
Sbjct:   349 ALDEISPLTFSVGNTMKRVVVIISTVLVFRNPVRPLNALGSAIAIFGTFLYSQATAKKKK 408

Query:   413 --VEGEKKN 419
               V G+KKN
Sbjct:   409 IEVGGDKKN 417
GO:0005355 "glucose transmembrane transporter activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0015297 "antiporter activity" evidence=ISS
GO:0015712 "hexose phosphate transport" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA
GO:0015713 "phosphoglycerate transport" evidence=IDA
GO:0035436 "triose phosphate transmembrane transport" evidence=IDA
GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0006863 "purine nucleobase transport" evidence=RCA
GO:0009536 "plastid" evidence=IDA
TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2145944 CUE1 "CAB UNDEREXPRESSED 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFE0410w PFE0410w "triose or hexose phosphate / phosphate translocator, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LF61XPT_ARATHNo assigned EC number0.69210.96420.9688yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
TIGR00817302 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate 2e-97
PTZ00343350 PTZ00343, PTZ00343, triose or hexose phosphate/pho 1e-76
pfam03151149 pfam03151, TPT, Triose-phosphate Transporter famil 1e-36
COG0697292 COG0697, RhaT, Permeases of the drug/metabolite tr 3e-08
pfam00892126 pfam00892, EamA, EamA-like transporter family 5e-04
pfam08449303 pfam08449, UAA, UAA transporter family 0.002
>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information 
 Score =  293 bits (751), Expect = 2e-97
 Identities = 147/300 (49%), Positives = 192/300 (64%), Gaps = 3/300 (1%)

Query: 115 LKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKI 174
           L+  L+FG WYF N+ FNIYNKK LNVFP+P+      L  GS++ L+ WS  L    KI
Sbjct: 1   LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKI 60

Query: 175 SKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSS-FLGDIYPLK 233
           S   +  LL  A+ HTIGH+++ VS SKVAVSFTH IK+ EP F+VV S+ FLG  +P  
Sbjct: 61  SSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST 120

Query: 234 VWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIGFVLRNIYSKKSLGDFKEVNGLNLY 293
           +WLS+LPIV G +LA+ TE+SFN+ G   AMISNI FV RNI+SKK++   K ++  NLY
Sbjct: 121 LWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAM-TIKSLDKTNLY 179

Query: 294 GWITIISLFYLFPVAIFVEGSQ-WIQGYHNAIAAVGKPSTFYFWVLLSGIFYHLYNQSSY 352
            +I+I+SLF L P A   EG      G+  AI+ V     +   ++ +  F+H Y Q ++
Sbjct: 180 AYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF 239

Query: 353 QALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQATAKKK 412
             L  +SPLT SVGN MKRVVVIV SIL F   + P    G+ IAI G FLYS+  A+K 
Sbjct: 240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302
>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family Back     alignment and domain information
>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family Back     alignment and domain information
>gnl|CDD|219846 pfam08449, UAA, UAA transporter family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 419
PTZ00343350 triose or hexose phosphate/phosphate translocator; 100.0
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 100.0
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 100.0
PLN00411358 nodulin MtN21 family protein; Provisional 99.97
PRK11689295 aromatic amino acid exporter; Provisional 99.96
PF08449303 UAA: UAA transporter family; InterPro: IPR013657 T 99.96
PRK11272292 putative DMT superfamily transporter inner membran 99.96
KOG1444314 consensus Nucleotide-sugar transporter VRG4/SQV-7 99.95
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 99.95
PRK15430296 putative chloramphenical resistance permease RarD; 99.95
KOG1443349 consensus Predicted integral membrane protein [Fun 99.95
PRK10532293 threonine and homoserine efflux system; Provisiona 99.95
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 99.94
PF06027334 DUF914: Eukaryotic protein of unknown function (DU 99.94
TIGR03340281 phn_DUF6 phosphonate utilization associated putati 99.9
KOG1581327 consensus UDP-galactose transporter related protei 99.89
KOG1442347 consensus GDP-fucose transporter [Carbohydrate tra 99.88
COG0697292 RhaT Permeases of the drug/metabolite transporter 99.87
TIGR00688256 rarD rarD protein. This uncharacterized protein is 99.86
KOG1580337 consensus UDP-galactose transporter related protei 99.86
KOG2765416 consensus Predicted membrane protein [Function unk 99.85
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 99.84
KOG1582367 consensus UDP-galactose transporter related protei 99.84
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 99.82
KOG3912372 consensus Predicted integral membrane protein [Gen 99.79
KOG4510346 consensus Permease of the drug/metabolite transpor 99.79
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 99.78
COG2962293 RarD Predicted permeases [General function predict 99.73
KOG1583330 consensus UDP-N-acetylglucosamine transporter [Car 99.73
PF04142244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 99.72
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 99.7
KOG2234345 consensus Predicted UDP-galactose transporter [Car 99.68
KOG2766336 consensus Predicted membrane protein [Function unk 99.54
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.23
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 99.19
KOG4314290 consensus Predicted carbohydrate/phosphate translo 99.12
COG2510140 Predicted membrane protein [Function unknown] 99.12
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.04
PF13536113 EmrE: Multidrug resistance efflux transporter 99.02
PF06800269 Sugar_transport: Sugar transport protein; InterPro 99.01
COG2510140 Predicted membrane protein [Function unknown] 99.0
PRK15430 296 putative chloramphenical resistance permease RarD; 98.76
TIGR03340 281 phn_DUF6 phosphonate utilization associated putati 98.69
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 98.68
TIGR00688 256 rarD rarD protein. This uncharacterized protein is 98.67
PLN00411 358 nodulin MtN21 family protein; Provisional 98.46
PF05653300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 98.4
PRK10532293 threonine and homoserine efflux system; Provisiona 98.37
PRK11689295 aromatic amino acid exporter; Provisional 98.36
PRK11272292 putative DMT superfamily transporter inner membran 98.32
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.31
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.3
PRK13499345 rhamnose-proton symporter; Provisional 98.24
COG2962 293 RarD Predicted permeases [General function predict 98.09
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 98.08
TIGR00776 290 RhaT RhaT L-rhamnose-proton symporter family prote 98.05
PTZ00343 350 triose or hexose phosphate/phosphate translocator; 98.04
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 98.03
TIGR00817 302 tpt Tpt phosphate/phosphoenolpyruvate translocator 97.94
PF13536113 EmrE: Multidrug resistance efflux transporter 97.91
KOG2922335 consensus Uncharacterized conserved protein [Funct 97.87
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 97.8
COG0697292 RhaT Permeases of the drug/metabolite transporter 97.77
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.73
PF08449 303 UAA: UAA transporter family; InterPro: IPR013657 T 97.72
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.6
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.44
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 97.39
PF06027 334 DUF914: Eukaryotic protein of unknown function (DU 97.37
PRK13499 345 rhamnose-proton symporter; Provisional 97.33
PRK09541110 emrE multidrug efflux protein; Reviewed 97.28
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.27
PRK11431105 multidrug efflux system protein; Provisional 97.21
PRK10650109 multidrug efflux system protein MdtI; Provisional 97.21
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 97.19
PF04142 244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 97.18
COG2076106 EmrE Membrane transporters of cations and cationic 97.15
PF06800269 Sugar_transport: Sugar transport protein; InterPro 97.08
PRK09541110 emrE multidrug efflux protein; Reviewed 97.07
PRK10650109 multidrug efflux system protein MdtI; Provisional 96.96
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 96.74
PRK11431105 multidrug efflux system protein; Provisional 96.68
COG2076106 EmrE Membrane transporters of cations and cationic 96.49
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 96.36
KOG4510346 consensus Permease of the drug/metabolite transpor 96.26
KOG2234 345 consensus Predicted UDP-galactose transporter [Car 96.19
PF07857 254 DUF1632: CEO family (DUF1632); InterPro: IPR012435 96.08
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 96.01
PF05653 300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 96.0
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 95.93
COG4975 288 GlcU Putative glucose uptake permease [Carbohydrat 95.6
COG3238150 Uncharacterized protein conserved in bacteria [Fun 95.58
COG3238150 Uncharacterized protein conserved in bacteria [Fun 95.49
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 95.09
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 94.77
KOG1581327 consensus UDP-galactose transporter related protei 94.67
KOG1580 337 consensus UDP-galactose transporter related protei 94.48
PF06379 344 RhaT: L-rhamnose-proton symport protein (RhaT); In 94.05
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 89.5
KOG2765416 consensus Predicted membrane protein [Function unk 87.53
KOG1444 314 consensus Nucleotide-sugar transporter VRG4/SQV-7 87.19
KOG4314 290 consensus Predicted carbohydrate/phosphate translo 85.67
PF06379344 RhaT: L-rhamnose-proton symport protein (RhaT); In 82.42
PRK02237109 hypothetical protein; Provisional 80.71
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.3e-38  Score=306.42  Aligned_cols=295  Identities=39%  Similarity=0.713  Sum_probs=253.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhCcCCCCCCC--HHHHHHHHHHHHHHH
Q 014782          113 KTLKLALVFGFWYFQNIVFNIYNKKALNVFPFPWLLASFQLFAGSVWMLVLWSLKLQPCPKIS--KPFIIALLGPALFHT  190 (419)
Q Consensus       113 ~~l~~~~~~~~w~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~  190 (419)
                      ..++...+++.||+++...++.||++++.+|+|++++++|++++++++.+++..+.++.++.+  +++++.+++.|+++.
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999998877766655544444442  457899999999998


Q ss_pred             HHHHHhhhHhcccchhHHHHHHHhHHHHHHHHHH-HhCCccChhHHHHHHHHHhhhheeecccccccHHhHHHHHHHHHH
Q 014782          191 IGHISACVSFSKVAVSFTHVIKSAEPVFAVVFSS-FLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGAMISNIG  269 (419)
Q Consensus       191 ~~~~~~~~al~~~~~~~~~li~~~~Pi~~~lls~-~l~er~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~  269 (419)
                      ..+...+.|+++++++.++++++++|++++++++ ++|||++++++++++++++|+.+++.+|.++++.|++++++|+++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~  205 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG  205 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence            8888888999999999999999999999999999 999999999999999999999999988888889999999999999


Q ss_pred             HHHHHHHHHhhcCCCC----CCChhhHHHHHHHHHHHHHHHHHHHhcChhhhhhhhhh---hhhcCCchHHHHHHHHHHH
Q 014782          270 FVLRNIYSKKSLGDFK----EVNGLNLYGWITIISLFYLFPVAIFVEGSQWIQGYHNA---IAAVGKPSTFYFWVLLSGI  342 (419)
Q Consensus       270 ~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  342 (419)
                      +|+|+++.||.+++.+    ++++.++..++.+.+.++++|+....|+..+...+...   ...+.... ++..++.+++
T Consensus       206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~s~l  284 (350)
T PTZ00343        206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGI-IIFKIFFSGV  284 (350)
T ss_pred             HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHH-HHHHHHHHHH
Confidence            9999999999876532    46777788888999999999998767754333222110   01111111 3456777888


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhhcccccchhhhhHHHHHHHHHHHHhhh
Q 014782          343 FYHLYNQSSYQALDDISPLTFSVGNTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQAT  408 (419)
Q Consensus       343 ~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~~il~~l~fge~ls~~~~iG~~lil~Gv~l~~~~~  408 (419)
                      .++++|.+.|.++++++|+++++.++++|++++++|++++||++++.+++|++++++|+++|++.|
T Consensus       285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            888999999999999999999999999999999999999999999999999999999999998763

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>KOG1443 consensus Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2766 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>KOG2922 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information
>PRK02237 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.0 bits (121), Expect = 6e-07
 Identities = 40/274 (14%), Positives = 85/274 (31%), Gaps = 61/274 (22%)

Query: 150 SFQLFAGSVWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVS-FT 208
              L    +       L  +     + P  ++++  ++   +       ++  V     T
Sbjct: 303 VKSLLLKYLDCRPQ-DLPREVL-TTN-PRRLSIIAESIRDGLATWD---NWKHVNCDKLT 356

Query: 209 HVIKSA----EPV-FAVVFSSFLGDIYPLKVWLSILPIVLGCSLAAVTEVSFNFGGLWGA 263
            +I+S+    EP  +  +F      ++P      I  I+L                +W  
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLS--VFPPSAH--IPTILLSL--------------IWFD 398

Query: 264 MISNIGFVLRNIYSKKSL--GDFKEVNGLNLYGWITIISLFYLFPV-------AIFVEGS 314
           +I +   V+ N   K SL     KE + +++      I L     +          V+  
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKE-STISIPS----IYLELKVKLENEYALHRSIVDHY 453

Query: 315 QWIQGYHNAIAAVGKPSTF-YFWVLLSGIFYHLYNQSSYQALDDISPLTFSVGNTMKRVV 373
              + + +    +  P    YF+   S I +HL N    + +     +       +++ +
Sbjct: 454 NIPKTFDS--DDLIPPYLDQYFY---SHIGHHLKNIEHPERMTLFRMVFLDF-RFLEQKI 507

Query: 374 VIVASILVFRNPVRPLNALGSAIAIFGTF-LYSQ 406
                    R+     NA GS +        Y  
Sbjct: 508 ---------RHDSTAWNASGSILNTLQQLKFYKP 532

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query419
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.39
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.3
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.21
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.01
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
Probab=98.39  E-value=6.2e-07  Score=74.41  Aligned_cols=63  Identities=13%  Similarity=-0.004  Sum_probs=44.7

Q ss_pred             HHHHHHHHHhhccChhHHHHH-HHHHHHHHHHHHHHhhcccccchhhhhHHHHHHHHHHHHhhh
Q 014782          346 LYNQSSYQALDDISPLTFSVG-NTMKRVVVIVASILVFRNPVRPLNALGSAIAIFGTFLYSQAT  408 (419)
Q Consensus       346 ~~~~~~~~~l~~~sa~~~sv~-~~l~~v~~~il~~l~fge~ls~~~~iG~~lil~Gv~l~~~~~  408 (419)
                      +..+++..++++.++..+..+ ..+.|++++++|+++|||++++.+++|++++++|+++.+..+
T Consensus        42 ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           42 ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344566678999999988777 899999999999999999999999999999999999988654
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00