Citrus Sinensis ID: 014790

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
MQSENNTSAPTTPRLRHRRRSNEAIPDATKANGSHLLVHDRNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
cccccccccccccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccc
ccccccccccccccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccccccccEEcccccccccccccEEEEcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHEEccccccccccccccccccHHHHHHHHHHHHHHHHEccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccc
mqsenntsapttprlrhrrrsneaipdatkangshllvhdrNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAheerdlpgfrmlnWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGfffgrtpliklspkktwegFIGASVATITSAFVLANIMGRfqwltcprkdlatgwlhcdpgplfkpesfplpgwlpwkeitilPVQWHALCLGLFAsiiapfggffasgFKRAFKikdfgdsipghggitdrmDCQMVMAVFAYIYhqsfivpqSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
mqsenntsapttprlrhrrrsneaipdatkangshllvhdRNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
MQSENNTSAPTTPRLRHRRRSNEAIPDATKANGSHLLVHDRNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
**********************************HLLVHDRNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERL****
*********************************************SFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEIL********
*******************RSNEAIPDATKANGSHLLVHDRNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
*********************************SHLLVHDRNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERL****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MQSENNTSAPTTPRLRHRRRSNEAIPDATKANGSHLLVHDRNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query418 2.2.26 [Sep-21-2011]
O04928421 Phosphatidate cytidylyltr no no 0.990 0.983 0.804 0.0
O04940424 Phosphatidate cytidylyltr N/A no 1.0 0.985 0.794 0.0
Q92903461 Phosphatidate cytidylyltr yes no 0.947 0.859 0.404 7e-85
O35052461 Phosphatidate cytidylyltr yes no 0.947 0.859 0.402 1e-84
P98191461 Phosphatidate cytidylyltr yes no 0.947 0.859 0.402 1e-84
Q9P381439 Putative phosphatidate cy yes no 0.925 0.881 0.384 3e-81
A0JNC1445 Phosphatidate cytidylyltr no no 0.964 0.905 0.386 4e-81
Q99L43444 Phosphatidate cytidylyltr no no 0.916 0.862 0.393 4e-81
O95674445 Phosphatidate cytidylyltr no no 0.885 0.831 0.410 2e-80
Q91XU8443 Phosphatidate cytidylyltr no no 0.966 0.911 0.387 2e-79
>sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase OS=Arabidopsis thaliana GN=CDS1 PE=2 SV=1 Back     alignment and function desciption
 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/420 (80%), Positives = 373/420 (88%), Gaps = 6/420 (1%)

Query: 1   MQSENNTSAPTTP--RLRHRRRSNEAIPDATKANGSHLLVHDRNKYKSFLVRAYSTVWMI 58
           M+ EN TS+P+TP  RLRHRRRSNE + D  K N S LLV+DRNKYKSF+VR YST+WMI
Sbjct: 1   MEEENVTSSPSTPVHRLRHRRRSNEVVTDGDKVNASPLLVNDRNKYKSFMVRTYSTLWMI 60

Query: 59  AGFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFV 118
            GFVL+VYMGHLYITAMVVVIQIFMA+ELFNLLRKA E++ LP  + LNWHFFFTAMLFV
Sbjct: 61  GGFVLVVYMGHLYITAMVVVIQIFMAKELFNLLRKAPEDKCLPYIKQLNWHFFFTAMLFV 120

Query: 119 YGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQ 178
           YGRILSQRL NT+T+D+F Y+ VS LIKYHM ICY LYI GF+WFILTLKKKMYKYQF Q
Sbjct: 121 YGRILSQRLANTMTADQFFYRLVSGLIKYHMAICYLLYIIGFMWFILTLKKKMYKYQFGQ 180

Query: 179 YAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSP 238
           YAWTHMILIVVF QSSFTVA+IFEGIFWFLLPASLI+INDI AYIFGFFFGRTPLIKLSP
Sbjct: 181 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIIINDIFAYIFGFFFGRTPLIKLSP 240

Query: 239 KKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPG 298
           KKTWEGFIGASV TI SAFVLANI+GRF WLTCPR+DL+TGWL CD  PLFKPE F LP 
Sbjct: 241 KKTWEGFIGASVTTIISAFVLANILGRFPWLTCPRQDLSTGWLQCDADPLFKPEPFALPA 300

Query: 299 WL----PWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGI 354
           W+    PWKE+TILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGI
Sbjct: 301 WIPEWFPWKEMTILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGI 360

Query: 355 TDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERL 414
           TDRMDCQMVMAVFAYIY QSFIV QS  V+ IL+QILT LT+EEQ+AL++KLG++L+++L
Sbjct: 361 TDRMDCQMVMAVFAYIYLQSFIVSQSVSVDKILDQILTNLTFEEQQALFVKLGQMLKDKL 420
May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 4EC: 1
>sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solanum tuberosum GN=CDS1 PE=2 SV=1 Back     alignment and function description
>sp|Q92903|CDS1_HUMAN Phosphatidate cytidylyltransferase 1 OS=Homo sapiens GN=CDS1 PE=2 SV=2 Back     alignment and function description
>sp|O35052|CDS1_RAT Phosphatidate cytidylyltransferase 1 OS=Rattus norvegicus GN=Cds1 PE=1 SV=2 Back     alignment and function description
>sp|P98191|CDS1_MOUSE Phosphatidate cytidylyltransferase 1 OS=Mus musculus GN=Cds1 PE=2 SV=2 Back     alignment and function description
>sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13A2.03 PE=1 SV=1 Back     alignment and function description
>sp|A0JNC1|CDS2_BOVIN Phosphatidate cytidylyltransferase 2 OS=Bos taurus GN=CDS2 PE=1 SV=1 Back     alignment and function description
>sp|Q99L43|CDS2_MOUSE Phosphatidate cytidylyltransferase 2 OS=Mus musculus GN=Cds2 PE=1 SV=1 Back     alignment and function description
>sp|O95674|CDS2_HUMAN Phosphatidate cytidylyltransferase 2 OS=Homo sapiens GN=CDS2 PE=1 SV=1 Back     alignment and function description
>sp|Q91XU8|CDS2_RAT Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus GN=Cds2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query418
255554719423 phosphatidate cytidylyltransferase, puta 1.0 0.988 0.825 0.0
356576511424 PREDICTED: phosphatidate cytidylyltransf 0.968 0.955 0.841 0.0
356535384424 PREDICTED: phosphatidate cytidylyltransf 0.954 0.941 0.848 0.0
297799782423 hypothetical protein ARALYDRAFT_492631 [ 0.997 0.985 0.810 0.0
357447853426 Phosphatidate cytidylyltransferase [Medi 0.954 0.936 0.836 0.0
224118188422 predicted protein [Populus trichocarpa] 0.985 0.976 0.808 0.0
79325225447 cytidinediphosphate diacylglycerol synth 0.997 0.932 0.801 0.0
15235611423 cytidinediphosphate diacylglycerol synth 0.997 0.985 0.801 0.0
30696710421 phosphatidate cytidylyltransferase [Arab 0.990 0.983 0.804 0.0
449434016422 PREDICTED: phosphatidate cytidylyltransf 0.995 0.985 0.793 0.0
>gi|255554719|ref|XP_002518397.1| phosphatidate cytidylyltransferase, putative [Ricinus communis] gi|223542242|gb|EEF43784.1| phosphatidate cytidylyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/423 (82%), Positives = 383/423 (90%), Gaps = 5/423 (1%)

Query: 1   MQSENNTSAPTTP-RLRHRRRSNEAIPDATKANGSHLLVHDRNKYKSFLVRAYSTVWMIA 59
           MQ ++N++ P+T  RLRHR+RSNE +P+A K NG HLLV D+NKYKS  +R  STVWMI 
Sbjct: 1   MQKDHNSTVPSTSSRLRHRKRSNEVVPEAAKENGGHLLVDDQNKYKSMWIRTCSTVWMIG 60

Query: 60  GFVLIVYMGHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVY 119
            F LIVYMGHLYITAMVVVIQI+MA+ELFNLLRKAHE+R LPGFR+LNWHFFFTAMLFVY
Sbjct: 61  SFALIVYMGHLYITAMVVVIQIYMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFVY 120

Query: 120 GRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQY 179
           GRILSQRLVNTVTSDKFL+Q V+SLIKYHM +CYFLYI+GF+WFILTLKKKMYKYQF QY
Sbjct: 121 GRILSQRLVNTVTSDKFLFQLVNSLIKYHMAMCYFLYIAGFMWFILTLKKKMYKYQFGQY 180

Query: 180 AWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPK 239
           AWTHMILIVVF QSSFTVA+IFEGIFWFLLPASLIVINDI AYI GFFFGRTPLIKLSPK
Sbjct: 181 AWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPK 240

Query: 240 KTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGW 299
           KTWEGFIGASV T+ SAFVLAN+MGRFQWLTCPRKDL++GWL CDPGPLFKPE F LP W
Sbjct: 241 KTWEGFIGASVTTMISAFVLANMMGRFQWLTCPRKDLSSGWLQCDPGPLFKPEYFILPEW 300

Query: 300 L----PWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGIT 355
           +    PWKEI+ILPVQWHAL LGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGIT
Sbjct: 301 VPQWFPWKEISILPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGIT 360

Query: 356 DRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLF 415
           DRMDCQMVMAVFAYIYHQSF+VPQS  VEMIL+QIL  LT+EEQ ALYMKLGE+++ER+ 
Sbjct: 361 DRMDCQMVMAVFAYIYHQSFVVPQSISVEMILDQILANLTFEEQYALYMKLGEMVRERVV 420

Query: 416 GQS 418
           G+S
Sbjct: 421 GRS 423

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356576511|ref|XP_003556374.1| PREDICTED: phosphatidate cytidylyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|356535384|ref|XP_003536226.1| PREDICTED: phosphatidate cytidylyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|297799782|ref|XP_002867775.1| hypothetical protein ARALYDRAFT_492631 [Arabidopsis lyrata subsp. lyrata] gi|297313611|gb|EFH44034.1| hypothetical protein ARALYDRAFT_492631 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357447853|ref|XP_003594202.1| Phosphatidate cytidylyltransferase [Medicago truncatula] gi|87241162|gb|ABD33020.1| Phosphatidate cytidylyltransferase [Medicago truncatula] gi|355483250|gb|AES64453.1| Phosphatidate cytidylyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224118188|ref|XP_002331579.1| predicted protein [Populus trichocarpa] gi|222873803|gb|EEF10934.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|79325225|ref|NP_001031697.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] gi|332659197|gb|AEE84597.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15235611|ref|NP_193965.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] gi|4455156|emb|CAA16784.1| CDP-diacylglycerol synthetase-like protein [Arabidopsis thaliana] gi|7269080|emb|CAB79189.1| CDP-diacylglycerol synthetase-like protein [Arabidopsis thaliana] gi|17644177|gb|AAL38786.1| putative CDP-diacylglycerol synthetase [Arabidopsis thaliana] gi|20259077|gb|AAM14254.1| putative CDP-diacylglycerol synthetase [Arabidopsis thaliana] gi|21536804|gb|AAM61136.1| CDP-diacylglycerol synthetase-like protein [Arabidopsis thaliana] gi|332659195|gb|AEE84595.1| cytidinediphosphate diacylglycerol synthase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30696710|ref|NP_176433.2| phosphatidate cytidylyltransferase [Arabidopsis thaliana] gi|3121836|sp|O04928.1|CDS1_ARATH RecName: Full=Phosphatidate cytidylyltransferase; AltName: Full=CDP-DAG synthase; AltName: Full=CDP-DG synthase; AltName: Full=CDP-diacylglycerol synthase; Short=CDS; AltName: Full=CDP-diglyceride pyrophosphorylase; AltName: Full=CDP-diglyceride synthase; AltName: Full=CTP:phosphatidate cytidylyltransferase gi|7940286|gb|AAF70845.1|AC003113_12 F24O1.17 [Arabidopsis thaliana] gi|2181182|emb|CAA63969.1| CDP-diacylglycerol synthetase [Arabidopsis thaliana] gi|332195846|gb|AEE33967.1| phosphatidate cytidylyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449434016|ref|XP_004134792.1| PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis sativus] gi|449516305|ref|XP_004165187.1| PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query418
TAIR|locus:2132026447 CDS2 "cytidinediphosphate diac 0.976 0.912 0.818 1.9e-186
TAIR|locus:2027144421 CDS1 "CDP-diacylglycerol synth 0.990 0.983 0.804 1.3e-185
TAIR|locus:2116272471 AT4G26770 [Arabidopsis thalian 0.988 0.876 0.733 6.2e-172
ASPGD|ASPL0000030062450 AN5166 [Emericella nidulans (t 0.873 0.811 0.44 2.4e-85
UNIPROTKB|F6Z956467 CDS1 "Phosphatidate cytidylylt 0.870 0.779 0.428 3.9e-83
UNIPROTKB|G1LAF9459 CDS1 "Phosphatidate cytidylylt 0.873 0.795 0.432 5e-83
UNIPROTKB|G3MZU2461 LOC100336936 "Phosphatidate cy 0.873 0.791 0.432 6.4e-83
UNIPROTKB|F6SYW0461 CDS1 "Phosphatidate cytidylylt 0.873 0.791 0.430 8.2e-83
UNIPROTKB|Q5R9Z3461 DKFZp459A2126 "Putative unchar 0.873 0.791 0.427 1e-82
ZFIN|ZDB-GENE-070705-78431 si:ch211-168m18.1 "si:ch211-16 0.873 0.846 0.427 1e-82
TAIR|locus:2132026 CDS2 "cytidinediphosphate diacylglycerol synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
 Identities = 338/413 (81%), Positives = 373/413 (90%)

Query:     8 SAPTTPRLRHRRRSNEAIPDATKANGSHLLVHDRNKYKSFLVRAYSTVWMIAGFVLIVYM 67
             SAPTT R+RHR+R+++    A K NG+HLLV+D  KYKSFL+RAYST WMI GF LIVY+
Sbjct:    35 SAPTT-RVRHRKRNSDVGAGAGKPNGNHLLVNDSKKYKSFLIRAYSTFWMIGGFALIVYL 93

Query:    68 GHLYITAMVVVIQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRL 127
             GHLYITAMVVVIQIFMARELFNLLRK HE++ LPGFR+LNWHFFFTAMLFVYGRILSQRL
Sbjct:    94 GHLYITAMVVVIQIFMARELFNLLRKTHEDKQLPGFRLLNWHFFFTAMLFVYGRILSQRL 153

Query:   128 VNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILI 187
             VNTVT DK LY+ V+SLIKYHM ICY LYISGFVWFILTLKKKMYKYQFSQYAWTHMILI
Sbjct:   154 VNTVTPDKVLYRLVTSLIKYHMAICYSLYISGFVWFILTLKKKMYKYQFSQYAWTHMILI 213

Query:   188 VVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIG 247
             VVF QSSFTVA+IFEGIFWFLLPASLIVINDI AYI GFFFGRTPLIKLSPKKTWEGFIG
Sbjct:   214 VVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPKKTWEGFIG 273

Query:   248 ASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGW----LPWK 303
             AS+ T+ SAF+LANIMGRF WLTCPR+DL+TGWL CDPGPLFK E+  LPGW    LPWK
Sbjct:   274 ASITTVISAFLLANIMGRFLWLTCPREDLSTGWLLCDPGPLFKQETHALPGWISDWLPWK 333

Query:   304 EITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMV 363
             EI+ILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMV
Sbjct:   334 EISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMV 393

Query:   364 MAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFG 416
             MAVFAYIYHQSF+VP+   V+ +L+QI+T+LT EEQ+AL +KLG++LQE++ G
Sbjct:   394 MAVFAYIYHQSFVVPEVLSVDKLLDQIITSLTLEEQQALLVKLGQMLQEKVIG 446
GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=IEA;ISS;IMP
GO:0016020 "membrane" evidence=IEA
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0019408 "dolichol biosynthetic process" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2027144 CDS1 "CDP-diacylglycerol synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116272 AT4G26770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000030062 AN5166 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|F6Z956 CDS1 "Phosphatidate cytidylyltransferase" [Monodelphis domestica (taxid:13616)] Back     alignment and assigned GO terms
UNIPROTKB|G1LAF9 CDS1 "Phosphatidate cytidylyltransferase" [Ailuropoda melanoleuca (taxid:9646)] Back     alignment and assigned GO terms
UNIPROTKB|G3MZU2 LOC100336936 "Phosphatidate cytidylyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F6SYW0 CDS1 "Phosphatidate cytidylyltransferase" [Equus caballus (taxid:9796)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R9Z3 DKFZp459A2126 "Putative uncharacterized protein DKFZp459A2126" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070705-78 si:ch211-168m18.1 "si:ch211-168m18.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P38221CDS1_YEAST2, ., 7, ., 7, ., 4, 10.37340.93540.8555yesno
P56079CDSA_DROME2, ., 7, ., 7, ., 4, 10.43790.86840.8120yesno
Q92903CDS1_HUMAN2, ., 7, ., 7, ., 4, 10.40470.94730.8590yesno
P98191CDS1_MOUSE2, ., 7, ., 7, ., 4, 10.40230.94730.8590yesno
Q9P381CDSH_SCHPO2, ., 7, ., 7, ., 4, 10.38400.92580.8815yesno
O04940CDS1_SOLTU2, ., 7, ., 7, ., 4, 10.79481.00.9858N/Ano
O04928CDS1_ARATH2, ., 7, ., 7, ., 4, 10.80470.99040.9833nono
P53439CDSA_CAEEL2, ., 7, ., 7, ., 4, 10.38720.91860.8439yesno
O35052CDS1_RAT2, ., 7, ., 7, ., 4, 10.40230.94730.8590yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.7.410.979
3rd Layer2.7.70.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query418
PLN02594342 PLN02594, PLN02594, phosphatidate cytidylyltransfe 0.0
pfam01148259 pfam01148, CTP_transf_1, Cytidylyltransferase fami 1e-63
COG0575265 COG0575, CdsA, CDP-diglyceride synthetase [Lipid m 4e-33
COG4589303 COG4589, COG4589, Predicted CDP-diglyceride synthe 3e-13
PLN02953403 PLN02953, PLN02953, phosphatidate cytidylyltransfe 3e-12
PRK11624285 PRK11624, cdsA, CDP-diglyceride synthase; Provisio 4e-11
>gnl|CDD|215322 PLN02594, PLN02594, phosphatidate cytidylyltransferase Back     alignment and domain information 
 Score =  640 bits (1653), Expect = 0.0
 Identities = 286/342 (83%), Positives = 306/342 (89%), Gaps = 4/342 (1%)

Query: 81  IFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQF 140
           I MARELFNL RKA EER LPGFR+LNWHFFFTAM FVYGR L Q+LVNTVTSDKFLY+ 
Sbjct: 1   ILMARELFNLARKAREERQLPGFRLLNWHFFFTAMFFVYGRFLKQQLVNTVTSDKFLYRL 60

Query: 141 VSSLIKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASI 200
           VS LIKYHM ICY LYI+GFVWFILTLKK MYKYQF QYAWTHMILIVVF QSSFTVA+I
Sbjct: 61  VSGLIKYHMAICYSLYIAGFVWFILTLKKGMYKYQFGQYAWTHMILIVVFTQSSFTVANI 120

Query: 201 FEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLA 260
           FEGIFWFLLPASLIVINDIAAY+FGFFFGRTPLIKLSPKKTWEGFIGASV T+ SAF LA
Sbjct: 121 FEGIFWFLLPASLIVINDIAAYLFGFFFGRTPLIKLSPKKTWEGFIGASVTTLISAFYLA 180

Query: 261 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGW----LPWKEITILPVQWHALC 316
           NIMG+FQWLTCPRKDL+TGWL CDP PLFKPE++PLPGW     PWKE+++LPVQWHAL 
Sbjct: 181 NIMGKFQWLTCPRKDLSTGWLECDPDPLFKPETYPLPGWIPRWFPWKEVSVLPVQWHALS 240

Query: 317 LGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFI 376
           LGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIY+QSFI
Sbjct: 241 LGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYYQSFI 300

Query: 377 VPQSFRVEMILEQILTALTYEEQKALYMKLGEILQERLFGQS 418
           VPQS  V  +L+QILT LT EEQK LY+KLG++LQER  G  
Sbjct: 301 VPQSVSVGKLLDQILTLLTDEEQKELYVKLGQMLQERGLGLG 342

Length = 342
>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family Back     alignment and domain information
>gnl|CDD|223648 COG0575, CdsA, CDP-diglyceride synthetase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|226955 COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|178539 PLN02953, PLN02953, phosphatidate cytidylyltransferase Back     alignment and domain information
>gnl|CDD|183240 PRK11624, cdsA, CDP-diglyceride synthase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 418
KOG1440432 consensus CDP-diacylglycerol synthase [Lipid trans 100.0
PLN02594342 phosphatidate cytidylyltransferase 100.0
PRK11624285 cdsA CDP-diglyceride synthase; Provisional 100.0
PLN02953403 phosphatidate cytidylyltransferase 100.0
COG4589303 Predicted CDP-diglyceride synthetase/phosphatidate 100.0
COG0575265 CdsA CDP-diglyceride synthetase [Lipid metabolism] 100.0
PF01148259 CTP_transf_1: Cytidylyltransferase family; InterPr 100.0
PRK04032159 hypothetical protein; Provisional 99.95
PF01864175 DUF46: Putative integral membrane protein DUF46; I 98.94
KOG4453269 consensus Predicted ER membrane protein [Function 97.85
COG0170216 SEC59 Dolichol kinase [Lipid metabolism] 97.43
KOG2468510 consensus Dolichol kinase [Lipid transport and met 94.03
>KOG1440 consensus CDP-diacylglycerol synthase [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.7e-96  Score=731.35  Aligned_cols=403  Identities=52%  Similarity=0.956  Sum_probs=377.0

Q ss_pred             CCCCCCCch--hhhccc----cCCCCCccccccCCCccccCChhhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 014790            5 NNTSAPTTP--RLRHRR----RSNEAIPDATKANGSHLLVHDRNKYKSFLVRAYSTVWMIAGFVLIVYMGHLYITAMVVV   78 (418)
Q Consensus         5 ~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~is~ivli~~~i~ii~~G~~~~~~lv~~   78 (418)
                      |++.+++++  ++++|+    +++|.+++.+.....+.+++.+++|+|+.+|.+++++|+..+.+++++||.|...++..
T Consensus        18 ~~~~~~s~~~~~l~~~~~~~~~~~~~s~~~~p~~~~~~l~~~~~~~~n~~~R~i~t~~mi~~f~~i~~~g~~~~~~lv~~   97 (432)
T KOG1440|consen   18 NATESESTPSGELQLRDRTRKIRPPVSKDRTPVRLKPLLSALRSRWKNFFRRGILTLAMISGFFLIIYMGHKYLMALVLV   97 (432)
T ss_pred             cCCCCCCCcccccchhhcccccCCCCCCCCCcccchhhhhhCCCCceeeehHHHHHHHHHhccEEEEecCcchhhhhhhh
Confidence            344445444  666666    66677777788888888899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 014790           79 IQIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYIS  158 (418)
Q Consensus        79 i~~~~~~E~~~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~l~~~  158 (418)
                      +++.+.+|.+++.++..+++++|+++.++||+++++++++|++.+..++......|..+.    .+.++|+++++.+|+.
T Consensus        98 iQi~~~~Eii~i~~~~~~~k~lp~f~~l~w~fl~t~~yf~yg~~~~~yf~~v~~~~~~l~----~LV~yh~fi~f~lYi~  173 (432)
T KOG1440|consen   98 IQIKCFKEIIAIGRKVSREKDLPWFRLLNWYFLLTVNYFVYGEILVAYFAAVFIRDRFLF----FLVRYHRFICFALYLI  173 (432)
T ss_pred             HHHHHHHHHHHHhhccccccCCceeehhhhHHHHHHHHHHhHHHHHHHHHHHHhhhHHHH----HHHHhcccccHHHHHH
Confidence            999999999999999999999999999999999999999999999888887776665543    4566999999999999


Q ss_pred             HHHHHHHHHhccccchhhhhHHHHHHHHHHHHHhhhhHHhhhhhhhHHHHHhhHHHHhhhHHHHHHhhhcCCCCCcccCC
Q 014790          159 GFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSP  238 (418)
Q Consensus       159 ~~v~fvl~L~~~~~~~~~~~~~~~~~~l~~v~~~s~~~i~~~~~G~~w~i~~~~~V~~nDi~AY~~G~~fGK~kL~~iSP  238 (418)
                      ++++|+++|+|+.|++||++++|+|+++++++.++++++.|+++|++|+++|+.+|+|||++||.+|..||||||+++||
T Consensus       174 gf~~FV~sL~k~~yk~QFg~fawtH~sll~Vv~qs~l~i~N~feG~fWFl~P~~lvicnDi~AY~~Gf~fGktPLiklSP  253 (432)
T KOG1440|consen  174 GFVSFVLSLRKGIYKLQFGLFAWTHMSLLLVVTQSHLVIQNLFEGLFWFLVPAGLVICNDIFAYLFGFFFGKTPLIKLSP  253 (432)
T ss_pred             HHHHHHHHhhhhhhHHHHHhHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHhHhheeCchHHHHHhhhhcCCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCC-ccccCCCCCCCCCCCCCCCC----CCccccccchhHHH
Q 014790          239 KKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATG-WLHCDPGPLFKPESFPLPGW----LPWKEITILPVQWH  313 (418)
Q Consensus       239 kKTwEGfIGG~i~t~i~~~i~~~~l~~~~~~~cp~~~~~~~-~~~c~~~~~f~~~~~~~~~~----~~~~~i~i~~~~~~  313 (418)
                      ||||||||||.++|++.+.++++.+++++|++||..|+++. +++||+++.|.+++|.+|.+    .+++++++.|.++|
T Consensus       254 KKTwEGFiGg~~~tvv~~i~~s~vL~~~~~~~cp~~d~~t~~~~~c~p~~~F~~~~y~lp~~i~~~i~~k~is~~p~~~H  333 (432)
T KOG1440|consen  254 KKTWEGFIGGTFGTVVFGILFSYVLGHYTFFTCPVKDFSTTPLLSCEPKPLFEPQTYGLPGVISITIRLKSISLPPFQFH  333 (432)
T ss_pred             CCccchhhchhHHHHHHHHHHHHHhccCeEEEecccccCCCCccccCcccccCcceecCCceeeeeccccccccchHHHH
Confidence            99999999999999999999999999999999999999987 79999999999999999987    45578899999999


Q ss_pred             HHHHHHHHHHhhhhhhHHHHHhhhcCCCCccCCCcCCCcchhhhhhhhhhHHHHHHHHHHHhccCCCCCHHHHHHHHHHc
Q 014790          314 ALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTA  393 (418)
Q Consensus       314 ~lil~l~asl~a~fGDL~eS~~KR~~gIKDsG~lIPGHGGiLDRfDsll~~~~f~y~y~~~fi~~~~~~~~~~~~~~~~~  393 (418)
                      ++.+|+++|++||||||+||++||++||||||+.|||||||+||||||++||.|+|.|+++|++.+.+|  +++++|+. 
T Consensus       334 sial~~faS~iaPFGGFfASgfKRafKiKDFG~~IPGHGGI~DR~DCQ~lma~Fay~Yi~SFI~~~~~s--~ll~qi~~-  410 (432)
T KOG1440|consen  334 SIALGLFASFIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQILMATFAYVYIQSFIRLPGVS--KLLDQILT-  410 (432)
T ss_pred             HHHHHHHHHhhccchhHHHHHhHHhhcCCcccccCCCCCCcchhhHHHHHHHHHHHHHHHHHhccCCHH--HHHHHHHh-
Confidence            999999999999999999999999999999999999999999999999999999999999999988765  99999998 


Q ss_pred             CCHHHHHHHHHHHHHHHhhcc
Q 014790          394 LTYEEQKALYMKLGEILQERL  414 (418)
Q Consensus       394 l~~~~~~~l~~~l~~~~~~~~  414 (418)
                      |++|||++|+|+|+++++++.
T Consensus       411 l~~~qq~~l~~~L~~~l~~~~  431 (432)
T KOG1440|consen  411 LTPEQQLNLFEKLQRRLSSKG  431 (432)
T ss_pred             CCHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999864

>PLN02594 phosphatidate cytidylyltransferase Back     alignment and domain information
>PRK11624 cdsA CDP-diglyceride synthase; Provisional Back     alignment and domain information
>PLN02953 phosphatidate cytidylyltransferase Back     alignment and domain information
>COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only] Back     alignment and domain information
>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism] Back     alignment and domain information
>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2 Back     alignment and domain information
>PRK04032 hypothetical protein; Provisional Back     alignment and domain information
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function Back     alignment and domain information
>KOG4453 consensus Predicted ER membrane protein [Function unknown] Back     alignment and domain information
>COG0170 SEC59 Dolichol kinase [Lipid metabolism] Back     alignment and domain information
>KOG2468 consensus Dolichol kinase [Lipid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query418
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.4 bits (122), Expect = 5e-07
 Identities = 60/410 (14%), Positives = 104/410 (25%), Gaps = 147/410 (35%)

Query: 80  QIFMARELFNLLRKAHEERDLPGFRMLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQ 139
            I    E+ +++          G   L W       L      + Q+ V  V      Y+
Sbjct: 44  SILSKEEIDHIIMSKDAVS---GTLRLFW------TLLSKQEEMVQKFVEEVLRIN--YK 92

Query: 140 FVSSLIKYHMV---ICYFLYIS--------------GFVW---FILTLKKKMYKYQFSQY 179
           F+ S IK       +   +YI                 V      L L++ + + + ++ 
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152

Query: 180 AWTH-M------ILIVVFAQSSFTVASIFEGIFWFLL-----PASLI------------- 214
                +       + +    S      +   IFW  L     P +++             
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 215 -------------VINDIAAYIFGFFFGR---TPLIKL---SPKKTWEGF-IG------- 247
                         I+ I A +      +     L+ L      K W  F +        
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272

Query: 248 --ASVATITSAFVLANI-MGRFQW-LTCPR-KDLATGWLHCDPGPLFKPESFPLPGWLPW 302
               V    SA    +I +      LT    K L   +L C P              LP 
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD------------LPR 320

Query: 303 KEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 362
           + +T  P       L + A                   I+D               D   
Sbjct: 321 EVLTTNP-----RRLSIIAE-----------------SIRDG----------LATWD--- 345

Query: 363 VMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQE 412
                    H         ++  I+E  L  L   E + ++ +L  +   
Sbjct: 346 ------NWKH-----VNCDKLTTIIESSLNVLEPAEYRKMFDRLS-VFPP 383
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00