Citrus Sinensis ID: 014822
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 418 | 2.2.26 [Sep-21-2011] | |||||||
| Q1RJT3 | 418 | Dihydrolipoyllysine-resid | yes | no | 0.942 | 0.942 | 0.345 | 2e-58 | |
| Q4ULG1 | 412 | Dihydrolipoyllysine-resid | yes | no | 0.937 | 0.951 | 0.353 | 4e-58 | |
| Q92HK7 | 412 | Dihydrolipoyllysine-resid | yes | no | 0.937 | 0.951 | 0.348 | 2e-57 | |
| Q5M729 | 539 | Dihydrolipoyllysine-resid | no | no | 0.964 | 0.747 | 0.351 | 1e-56 | |
| O66119 | 440 | Dihydrolipoyllysine-resid | yes | no | 0.949 | 0.902 | 0.353 | 2e-56 | |
| Q8RWN9 | 539 | Dihydrolipoyllysine-resid | no | no | 0.961 | 0.745 | 0.350 | 5e-55 | |
| Q9ZD20 | 408 | Dihydrolipoyllysine-resid | yes | no | 0.913 | 0.936 | 0.322 | 2e-51 | |
| Q68WK6 | 404 | Dihydrolipoyllysine-resid | yes | no | 0.916 | 0.948 | 0.338 | 2e-51 | |
| Q19749 | 507 | Dihydrolipoyllysine-resid | yes | no | 0.971 | 0.800 | 0.359 | 4e-51 | |
| O59816 | 483 | Dihydrolipoyllysine-resid | yes | no | 0.971 | 0.840 | 0.333 | 8e-49 |
| >sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia bellii (strain RML369-C) GN=pdhC PE=3 SV=1 | Back alignment and function desciption |
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Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 229/423 (54%), Gaps = 29/423 (6%)
Query: 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV 60
MPALS TMTEG + W++ EGDK+ GE + +E+DKA M+VE +G LAKI++ +G
Sbjct: 7 MPALSPTMTEGNLARWLKKEGDKINPGEVIAEIETDKATMEVEAVDEGTLAKIIIPQGSQ 66
Query: 61 -ASVGSAIALLAESEDEIAEAQAKAAASGSPSSPASETSNSAAVVAAVPHPQPEKVKLAE 119
V S IA+L E +E++ + A + S S E S A +A P+ VK
Sbjct: 67 NVPVNSLIAVLIEEGEELSGIEEFIAKNNSNSPKKEEISKPAETIA------PQNVK--- 117
Query: 120 PAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAAA 179
+T S + ++ ASP AK+LA V + + GSGP GRI+ +DV +
Sbjct: 118 EENITTAS-----DQNNIKVFASPLAKRLAKIQNVRIEEIKGSGPHGRIIKQDVLSHKGG 172
Query: 180 AGPAAS-VAAAGPAGIELASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALDALY 237
+ ++ + + P LA P ++ +++ ++ES VP F + D L +
Sbjct: 173 SKALSNKIVSRNPEEYRLA---PNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIR 229
Query: 238 KKI-------KSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAVD 290
+ I KS +++ + A A AL + P N+S D ++ Y ++++I+VAVA++
Sbjct: 230 EDINKSFGDDKSAKISVNDFIILAVAKALQEVPNANASWGD-DAIRYYNNVDISVAVAIE 288
Query: 291 GGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDA 350
GL+TP++++AD+ +I LS + K L+ KAR L P E+ G FT+SNLGM+G+ F+A
Sbjct: 289 NGLVTPIIRNADQKNIVDLSSEMKGLIKKARENKLTPEEFQGGGFTISNLGMYGIKNFNA 348
Query: 351 ILPPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKII 410
I+ P IM VG+S + D +I + M V ++ADHRV+ GA A FL + I
Sbjct: 349 IINPPQSCIMGVGSSSKRAIVKND-QISIATIMDVTLSADHRVVDGAVGAEFLAAFKRFI 407
Query: 411 EDP 413
E P
Sbjct: 408 ESP 410
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The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). Rickettsia bellii (strain RML369-C) (taxid: 336407) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q4ULG1|ODP2_RICFE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhC PE=3 SV=1 | Back alignment and function description |
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| >sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=pdhC PE=3 SV=1 | Back alignment and function description |
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| >sp|Q5M729|OPD23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1 | Back alignment and function description |
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| >sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=pdhC PE=3 SV=2 | Back alignment and function description |
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| >sp|Q8RWN9|OPD22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia prowazekii (strain Madrid E) GN=pdhC PE=3 SV=1 | Back alignment and function description |
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| >sp|Q68WK6|ODP2_RICTY Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=pdhC PE=3 SV=1 | Back alignment and function description |
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| >sp|Q19749|ODP2_CAEEL Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Caenorhabditis elegans GN=F23B12.5 PE=1 SV=1 | Back alignment and function description |
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| >sp|O59816|ODP2_SCHPO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lat1 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 418 | ||||||
| 21536525 | 464 | dihydrolipoamide S-acetyltransferase, pu | 0.995 | 0.896 | 0.815 | 1e-180 | |
| 224135495 | 414 | predicted protein [Populus trichocarpa] | 0.971 | 0.980 | 0.809 | 1e-179 | |
| 225460716 | 477 | PREDICTED: dihydrolipoyllysine-residue a | 0.995 | 0.872 | 0.805 | 1e-179 | |
| 224146411 | 471 | predicted protein [Populus trichocarpa] | 0.976 | 0.866 | 0.780 | 1e-177 | |
| 15218630 | 465 | pyruvate dehydrogenase E2 component [Ara | 0.997 | 0.896 | 0.803 | 1e-176 | |
| 8778253 | 467 | F12K21.24 [Arabidopsis thaliana] | 0.997 | 0.892 | 0.8 | 1e-175 | |
| 255571796 | 473 | dihydrolipoamide acetyltransferase compo | 0.980 | 0.866 | 0.798 | 1e-175 | |
| 356576165 | 465 | PREDICTED: dihydrolipoyllysine-residue a | 1.0 | 0.898 | 0.801 | 1e-174 | |
| 297851884 | 461 | EMB3003 [Arabidopsis lyrata subsp. lyrat | 0.985 | 0.893 | 0.799 | 1e-174 | |
| 449465366 | 464 | PREDICTED: dihydrolipoyllysine-residue a | 0.995 | 0.896 | 0.791 | 1e-171 |
| >gi|21536525|gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 345/423 (81%), Positives = 367/423 (86%), Gaps = 7/423 (1%)
Query: 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV 60
MPALSSTMTEGKIVSWV+SEGDKL KGESVVVVESDKADMDVETFYDGYLA IMV+EGGV
Sbjct: 44 MPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIMVEEGGV 103
Query: 61 ASVGSAIALLAESEDEIAEAQAKAAASGSPSSPASETSNSAAVVAAVPHPQPEKVKLAEP 120
A VGSAIALLAE+EDEIA+A+AKA+ G S S A V A P +K+ A P
Sbjct: 104 APVGSAIALLAETEDEIADAKAKASGGGGDSKAPPPASPPTATVVA-PVAVEKKIA-APP 161
Query: 121 AAV--TVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAA 178
A+ SAVHPASEGGKRIVASPYAKKLA EL VELA +VGSGP GRIVAKDVEA AA
Sbjct: 162 VAIKAVAASAVHPASEGGKRIVASPYAKKLAKELNVELAGLVGSGPMGRIVAKDVEAVAA 221
Query: 179 AAGPAASVAAAGPA---GIELASVVPFTTMQGAVSRNMVESLAVPTFRVGYTITTDALDA 235
G A+VA G+EL SVVPFTTMQGAVSRNMVESLAVPTFRVGYTI+TDALDA
Sbjct: 222 GGGVQAAVAVKEVVAVPGVELGSVVPFTTMQGAVSRNMVESLAVPTFRVGYTISTDALDA 281
Query: 236 LYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAVDGGLIT 295
LYKKIKSKGVTMTALLAKATALAL +HPVVNSSCRDGNSF+YNSSIN+AVAVA+DGGLIT
Sbjct: 282 LYKKIKSKGVTMTALLAKATALALAKHPVVNSSCRDGNSFVYNSSINVAVAVAIDGGLIT 341
Query: 296 PVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAILPPG 355
PVLQ+ADK DIY+LSRKWKELVDKARAK LQP EYNTGTFTLSNLGMFGVDRFDAILPPG
Sbjct: 342 PVLQNADKVDIYSLSRKWKELVDKARAKQLQPQEYNTGTFTLSNLGMFGVDRFDAILPPG 401
Query: 356 TGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRD 415
TGAIMAVGAS+P+VVATKDGRIGMKNQMQVNVTADHRVIYGADLA FLQTLA IIEDP+D
Sbjct: 402 TGAIMAVGASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKD 461
Query: 416 LTF 418
LTF
Sbjct: 462 LTF 464
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135495|ref|XP_002327232.1| predicted protein [Populus trichocarpa] gi|222835602|gb|EEE74037.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225460716|ref|XP_002271286.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224146411|ref|XP_002325998.1| predicted protein [Populus trichocarpa] gi|222862873|gb|EEF00380.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|15218630|ref|NP_174703.1| pyruvate dehydrogenase E2 component [Arabidopsis thaliana] gi|12323852|gb|AAG51893.1|AC023913_1 dihydrolipoamide S-acetyltransferase, putative; 19109-21166 [Arabidopsis thaliana] gi|22135832|gb|AAM91102.1| At1g34430/F7P12_2 [Arabidopsis thaliana] gi|24111345|gb|AAN46796.1| At1g34430/F7P12_2 [Arabidopsis thaliana] gi|332193592|gb|AEE31713.1| pyruvate dehydrogenase E2 component [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|8778253|gb|AAF79262.1|AC023279_11 F12K21.24 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|255571796|ref|XP_002526841.1| dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase, putative [Ricinus communis] gi|223533845|gb|EEF35576.1| dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356576165|ref|XP_003556204.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297851884|ref|XP_002893823.1| EMB3003 [Arabidopsis lyrata subsp. lyrata] gi|297339665|gb|EFH70082.1| EMB3003 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449465366|ref|XP_004150399.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 418 | ||||||
| TAIR|locus:2009273 | 465 | EMB3003 "AT1G34430" [Arabidops | 0.997 | 0.896 | 0.739 | 3.5e-155 | |
| TAIR|locus:2092070 | 480 | LTA2 "AT3G25860" [Arabidopsis | 0.968 | 0.843 | 0.599 | 4.4e-123 | |
| GENEDB_PFALCIPARUM|PF10_0407 | 640 | PF10_0407 "dihydrolipoamide ac | 0.5 | 0.326 | 0.369 | 2.2e-51 | |
| UNIPROTKB|Q8IJJ4 | 640 | PF10_0407 "Dihydrolipoamide ac | 0.5 | 0.326 | 0.369 | 2.2e-51 | |
| TIGR_CMR|NSE_0953 | 403 | NSE_0953 "pyruvate dehydrogena | 0.655 | 0.679 | 0.352 | 1.6e-49 | |
| TIGR_CMR|SPO_2242 | 437 | SPO_2242 "pyruvate dehydrogena | 0.5 | 0.478 | 0.353 | 8.7e-49 | |
| FB|FBgn0031912 | 512 | CG5261 [Drosophila melanogaste | 0.985 | 0.804 | 0.311 | 1.4e-48 | |
| TAIR|locus:2088247 | 539 | AT3G13930 [Arabidopsis thalian | 0.966 | 0.749 | 0.311 | 1.8e-46 | |
| TIGR_CMR|GSU_2435 | 418 | GSU_2435 "dehydrogenase comple | 0.959 | 0.959 | 0.307 | 2.3e-46 | |
| WB|WBGene00009082 | 507 | dlat-1 [Caenorhabditis elegans | 0.978 | 0.806 | 0.313 | 2.3e-46 |
| TAIR|locus:2009273 EMB3003 "AT1G34430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
Identities = 313/423 (73%), Positives = 331/423 (78%)
Query: 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV 60
MPALSSTMTEGKIVSWV+SEGDKL KGESVVVVESDKADMDVETFYDGYLA IMV+EGGV
Sbjct: 44 MPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIMVEEGGV 103
Query: 61 ASVGSAIALLAESEDEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHPQPEKVKLAEP 120
A VGSAIALLAE+EDEI P +KV A P
Sbjct: 104 APVGSAIALLAETEDEIADAKAKASGGGGGGDSKAPPASPPTAAVEAPVSVEKKVAAA-P 162
Query: 121 AAV--TVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDXXXXXX 178
++ SAVHPASEGGKRIVASPYAKKLA ELKVELA +VGSGP GRIVAKD
Sbjct: 163 VSIKAVAASAVHPASEGGKRIVASPYAKKLAKELKVELAGLVGSGPMGRIVAKDVEAVAA 222
Query: 179 XXXXXXXXXXX---XXXGIELASVVPFTTMQGAVSRNMVESLAVPTFRVGYTITTDALDA 235
G+EL SVVPFTTMQGAVSRNMVESL VPTFRVGYTI+TDALDA
Sbjct: 223 GGGVQAAVAVKEVVAAPGVELGSVVPFTTMQGAVSRNMVESLGVPTFRVGYTISTDALDA 282
Query: 236 LYKKIKSKGVTMXXXXXXXXXXXXVQHPVVNSSCRDGNSFIYNSSINIAVAVAVDGGLIT 295
LYKKIKSKGVTM +HPVVNSSCRDGNSF+YNSSIN+AVAVA+DGGLIT
Sbjct: 283 LYKKIKSKGVTMTALLAKATALALAKHPVVNSSCRDGNSFVYNSSINVAVAVAIDGGLIT 342
Query: 296 PVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAILPPG 355
PVLQ+ADK DIY+LSRKWKELVDKARAK LQP EYNTGTFTLSNLGMFGVDRFDAILPPG
Sbjct: 343 PVLQNADKVDIYSLSRKWKELVDKARAKQLQPQEYNTGTFTLSNLGMFGVDRFDAILPPG 402
Query: 356 TGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRD 415
TGAIMAVGAS+P+VVATKDGRIGMKNQMQVNVTADHRVIYGADLA FLQTLA IIEDP+D
Sbjct: 403 TGAIMAVGASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKD 462
Query: 416 LTF 418
LTF
Sbjct: 463 LTF 465
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| TAIR|locus:2092070 LTA2 "AT3G25860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| GENEDB_PFALCIPARUM|PF10_0407 PF10_0407 "dihydrolipoamide acetyltransferase, putative" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8IJJ4 PF10_0407 "Dihydrolipoamide acyltransferase, putative" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
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| TIGR_CMR|NSE_0953 NSE_0953 "pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] | Back alignment and assigned GO terms |
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| TIGR_CMR|SPO_2242 SPO_2242 "pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
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| FB|FBgn0031912 CG5261 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| TAIR|locus:2088247 AT3G13930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TIGR_CMR|GSU_2435 GSU_2435 "dehydrogenase complex E2 component, dihydrolipamide acetyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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| WB|WBGene00009082 dlat-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q19749 | ODP2_CAEEL | 2, ., 3, ., 1, ., 1, 2 | 0.3594 | 0.9712 | 0.8007 | yes | no |
| O31550 | ACOC_BACSU | 2, ., 3, ., 1, ., 1, 2 | 0.3046 | 0.9090 | 0.9547 | yes | no |
| Q4ULG1 | ODP2_RICFE | 2, ., 3, ., 1, ., 1, 2 | 0.3530 | 0.9377 | 0.9514 | yes | no |
| Q68WK6 | ODP2_RICTY | 2, ., 3, ., 1, ., 1, 2 | 0.3380 | 0.9162 | 0.9480 | yes | no |
| Q9ZD20 | ODP2_RICPR | 2, ., 3, ., 1, ., 1, 2 | 0.3224 | 0.9138 | 0.9362 | yes | no |
| Q9R9N3 | ODP2_RHIME | 2, ., 3, ., 1, ., 1, 2 | 0.34 | 0.9545 | 0.8926 | yes | no |
| O66119 | ODP2_ZYMMO | 2, ., 3, ., 1, ., 1, 2 | 0.3536 | 0.9497 | 0.9022 | yes | no |
| Q1RJT3 | ODP2_RICBR | 2, ., 3, ., 1, ., 1, 2 | 0.3451 | 0.9425 | 0.9425 | yes | no |
| O59816 | ODP2_SCHPO | 2, ., 3, ., 1, ., 1, 2 | 0.3333 | 0.9712 | 0.8405 | yes | no |
| P12695 | ODP2_YEAST | 2, ., 3, ., 1, ., 1, 2 | 0.3178 | 0.9688 | 0.8402 | yes | no |
| Q92HK7 | ODP2_RICCN | 2, ., 3, ., 1, ., 1, 2 | 0.3483 | 0.9377 | 0.9514 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.766 |
| 3rd Layer | 2.3.1.12 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 418 | |||
| PRK11856 | 411 | PRK11856, PRK11856, branched-chain alpha-keto acid | 1e-140 | |
| COG0508 | 404 | COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogena | 3e-96 | |
| TIGR01349 | 436 | TIGR01349, PDHac_trf_mito, pyruvate dehydrogenase | 2e-88 | |
| PLN02744 | 539 | PLN02744, PLN02744, dihydrolipoyllysine-residue ac | 3e-76 | |
| pfam00198 | 212 | pfam00198, 2-oxoacid_dh, 2-oxoacid dehydrogenases | 7e-70 | |
| PRK11855 | 547 | PRK11855, PRK11855, dihydrolipoamide acetyltransfe | 2e-64 | |
| PRK11854 | 633 | PRK11854, aceF, pyruvate dehydrogenase dihydrolipo | 1e-53 | |
| TIGR01347 | 403 | TIGR01347, sucB, 2-oxoglutarate dehydrogenase comp | 6e-47 | |
| PRK14843 | 347 | PRK14843, PRK14843, dihydrolipoamide acetyltransfe | 5e-46 | |
| TIGR01348 | 546 | TIGR01348, PDHac_trf_long, pyruvate dehydrogenase | 2e-43 | |
| TIGR02927 | 579 | TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogena | 3e-42 | |
| PRK05704 | 407 | PRK05704, PRK05704, dihydrolipoamide succinyltrans | 2e-40 | |
| PLN02528 | 416 | PLN02528, PLN02528, 2-oxoisovalerate dehydrogenase | 2e-34 | |
| PTZ00144 | 418 | PTZ00144, PTZ00144, dihydrolipoamide succinyltrans | 4e-32 | |
| PRK11857 | 306 | PRK11857, PRK11857, dihydrolipoamide acetyltransfe | 6e-28 | |
| PLN02226 | 463 | PLN02226, PLN02226, 2-oxoglutarate dehydrogenase E | 2e-25 | |
| cd06849 | 74 | cd06849, lipoyl_domain, Lipoyl domain of the dihyd | 6e-22 | |
| PRK11892 | 464 | PRK11892, PRK11892, pyruvate dehydrogenase subunit | 3e-20 | |
| PRK12270 | 1228 | PRK12270, kgd, alpha-ketoglutarate decarboxylase; | 6e-19 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 4e-14 | |
| PRK11854 | 633 | PRK11854, aceF, pyruvate dehydrogenase dihydrolipo | 2e-12 | |
| PRK11855 | 547 | PRK11855, PRK11855, dihydrolipoamide acetyltransfe | 4e-12 | |
| pfam02817 | 39 | pfam02817, E3_binding, e3 binding domain | 2e-10 | |
| pfam00364 | 73 | pfam00364, Biotin_lipoyl, Biotin-requiring enzyme | 1e-09 | |
| cd06663 | 73 | cd06663, Biotinyl_lipoyl_domains, Biotinyl_lipoyl_ | 1e-09 | |
| PRK11854 | 633 | PRK11854, aceF, pyruvate dehydrogenase dihydrolipo | 1e-08 | |
| TIGR01348 | 546 | TIGR01348, PDHac_trf_long, pyruvate dehydrogenase | 2e-08 | |
| TIGR02927 | 579 | TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogena | 2e-08 | |
| PRK09282 | 592 | PRK09282, PRK09282, pyruvate carboxylase subunit B | 0.002 | |
| cd06850 | 67 | cd06850, biotinyl_domain, The biotinyl-domain or b | 0.003 |
| >gnl|CDD|237001 PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed | Back alignment and domain information |
|---|
Score = 406 bits (1046), Expect = e-140
Identities = 172/424 (40%), Positives = 244/424 (57%), Gaps = 30/424 (7%)
Query: 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV 60
MP L MTEG+IV W+ GD + +G+ + VE+DKA +++ + G +AK++V+EG V
Sbjct: 7 MPDLGEGMTEGEIVEWLVKVGDTVKEGQPLAEVETDKATVEIPSPVAGTVAKLLVEEGDV 66
Query: 61 ASVGSAIALLAESEDEIAEAQAKAAASGSPSSPASETSNSAAVVAAVPHPQPEKVKLAEP 120
VGS IA++ E + A A A+AA PA + +AA A
Sbjct: 67 VPVGSVIAVIEEEGEAEAAAAAEAAPEAPAPEPAPAAAAAAAAAPAAAAA---------- 116
Query: 121 AAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAAAA 180
PA+ ASP +KLA EL V+L+ V GSGP GRI +DVEA AAAA
Sbjct: 117 ----------PAAPAAAAAKASPAVRKLARELGVDLSTVKGSGPGGRITKEDVEAAAAAA 166
Query: 181 GPAASVAAAGPAGIELAS-----VVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALD 234
PAA+ AAA A A+ VP + M+ A+++ MVES +P F + + AL
Sbjct: 167 APAAAAAAAAAAAPPAAAAEGEERVPLSGMRKAIAKRMVESKREIPHFTLTDEVDVTALL 226
Query: 235 ALYKKIKS--KGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAVDGG 292
AL K++K+ +T+T L KA ALAL + P +N+S D ++ + +NI +AVA DGG
Sbjct: 227 ALRKQLKAIGVKLTVTDFLIKAVALALKKFPELNASW-DDDAIVLKKYVNIGIAVATDGG 285
Query: 293 LITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAIL 352
LI PV++DADK ++ L+R+ K+L +KAR L+P E GTFT+SNLGMFG D F I+
Sbjct: 286 LIVPVIRDADKKSLFELAREIKDLAEKAREGKLKPEELQGGTFTISNLGMFGGDYFTPII 345
Query: 353 PPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIED 412
P AI+ VGA V DG I ++ M ++++ DHRVI GAD A FL+ L +++E+
Sbjct: 346 NPPEVAILGVGAIVERPVV-VDGEIVVRKVMPLSLSFDHRVIDGADAARFLKALKELLEN 404
Query: 413 PRDL 416
P L
Sbjct: 405 PALL 408
|
Length = 411 |
| >gnl|CDD|223582 COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|233367 TIGR01349, PDHac_trf_mito, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form | Back alignment and domain information |
|---|
| >gnl|CDD|215397 PLN02744, PLN02744, dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | Back alignment and domain information |
|---|
| >gnl|CDD|215782 pfam00198, 2-oxoacid_dh, 2-oxoacid dehydrogenases acyltransferase (catalytic domain) | Back alignment and domain information |
|---|
| >gnl|CDD|237000 PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|236999 PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|233365 TIGR01347, sucB, 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) | Back alignment and domain information |
|---|
| >gnl|CDD|184847 PRK14843, PRK14843, dihydrolipoamide acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233366 TIGR01348, PDHac_trf_long, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form | Back alignment and domain information |
|---|
| >gnl|CDD|200219 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|235571 PRK05704, PRK05704, dihydrolipoamide succinyltransferase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|215289 PLN02528, PLN02528, 2-oxoisovalerate dehydrogenase E2 component | Back alignment and domain information |
|---|
| >gnl|CDD|240289 PTZ00144, PTZ00144, dihydrolipoamide succinyltransferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237002 PRK11857, PRK11857, dihydrolipoamide acetyltransferase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|177871 PLN02226, PLN02226, 2-oxoglutarate dehydrogenase E2 component | Back alignment and domain information |
|---|
| >gnl|CDD|133458 cd06849, lipoyl_domain, Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases | Back alignment and domain information |
|---|
| >gnl|CDD|237011 PRK11892, PRK11892, pyruvate dehydrogenase subunit beta; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236999 PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237000 PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|202412 pfam02817, E3_binding, e3 binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|201182 pfam00364, Biotin_lipoyl, Biotin-requiring enzyme | Back alignment and domain information |
|---|
| >gnl|CDD|133456 cd06663, Biotinyl_lipoyl_domains, Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS) | Back alignment and domain information |
|---|
| >gnl|CDD|236999 PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|233366 TIGR01348, PDHac_trf_long, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form | Back alignment and domain information |
|---|
| >gnl|CDD|200219 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|236449 PRK09282, PRK09282, pyruvate carboxylase subunit B; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|133459 cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 418 | |||
| PRK05704 | 407 | dihydrolipoamide succinyltransferase; Validated | 100.0 | |
| TIGR01347 | 403 | sucB 2-oxoglutarate dehydrogenase complex dihydrol | 100.0 | |
| PLN02744 | 539 | dihydrolipoyllysine-residue acetyltransferase comp | 100.0 | |
| PLN02528 | 416 | 2-oxoisovalerate dehydrogenase E2 component | 100.0 | |
| TIGR02927 | 590 | SucB_Actino 2-oxoglutarate dehydrogenase, E2 compo | 100.0 | |
| TIGR01349 | 435 | PDHac_trf_mito pyruvate dehydrogenase complex dihy | 100.0 | |
| TIGR01348 | 546 | PDHac_trf_long pyruvate dehydrogenase complex dihy | 100.0 | |
| KOG0557 | 470 | consensus Dihydrolipoamide acetyltransferase [Ener | 100.0 | |
| PRK11856 | 411 | branched-chain alpha-keto acid dehydrogenase subun | 100.0 | |
| PRK11854 | 633 | aceF pyruvate dehydrogenase dihydrolipoyltransacet | 100.0 | |
| PRK11855 | 547 | dihydrolipoamide acetyltransferase; Reviewed | 100.0 | |
| COG0508 | 404 | AceF Pyruvate/2-oxoglutarate dehydrogenase complex | 100.0 | |
| PLN02226 | 463 | 2-oxoglutarate dehydrogenase E2 component | 100.0 | |
| PTZ00144 | 418 | dihydrolipoamide succinyltransferase; Provisional | 100.0 | |
| KOG0558 | 474 | consensus Dihydrolipoamide transacylase (alpha-ket | 100.0 | |
| PRK14843 | 347 | dihydrolipoamide acetyltransferase; Provisional | 100.0 | |
| PRK11857 | 306 | dihydrolipoamide acetyltransferase; Reviewed | 100.0 | |
| KOG0559 | 457 | consensus Dihydrolipoamide succinyltransferase (2- | 100.0 | |
| PF00198 | 231 | 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransfe | 100.0 | |
| PRK12270 | 1228 | kgd alpha-ketoglutarate decarboxylase; Reviewed | 100.0 | |
| PF00302 | 206 | CAT: Chloramphenicol acetyltransferase; InterPro: | 100.0 | |
| PRK13757 | 219 | chloramphenicol acetyltransferase; Provisional | 100.0 | |
| COG4845 | 219 | Chloramphenicol O-acetyltransferase [Defense mecha | 99.95 | |
| PF00364 | 74 | Biotin_lipoyl: Biotin-requiring enzyme; InterPro: | 99.73 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.7 | |
| PRK06748 | 83 | hypothetical protein; Validated | 99.68 | |
| PRK05889 | 71 | putative acetyl-CoA carboxylase biotin carboxyl ca | 99.57 | |
| cd06663 | 73 | Biotinyl_lipoyl_domains Biotinyl_lipoyl_domains ar | 99.53 | |
| PRK11892 | 464 | pyruvate dehydrogenase subunit beta; Provisional | 99.5 | |
| COG0511 | 140 | AccB Biotin carboxyl carrier protein [Lipid metabo | 99.5 | |
| PRK08225 | 70 | acetyl-CoA carboxylase biotin carboxyl carrier pro | 99.48 | |
| PF02817 | 39 | E3_binding: e3 binding domain; InterPro: IPR004167 | 99.41 | |
| PRK11854 | 633 | aceF pyruvate dehydrogenase dihydrolipoyltransacet | 99.39 | |
| PRK06549 | 130 | acetyl-CoA carboxylase biotin carboxyl carrier pro | 99.39 | |
| TIGR02927 | 590 | SucB_Actino 2-oxoglutarate dehydrogenase, E2 compo | 99.36 | |
| PRK05641 | 153 | putative acetyl-CoA carboxylase biotin carboxyl ca | 99.34 | |
| PRK07051 | 80 | hypothetical protein; Validated | 99.31 | |
| cd06850 | 67 | biotinyl_domain The biotinyl-domain or biotin carb | 99.29 | |
| PLN02983 | 274 | biotin carboxyl carrier protein of acetyl-CoA carb | 99.27 | |
| PRK11855 | 547 | dihydrolipoamide acetyltransferase; Reviewed | 99.25 | |
| TIGR00531 | 156 | BCCP acetyl-CoA carboxylase, biotin carboxyl carri | 99.25 | |
| TIGR01348 | 546 | PDHac_trf_long pyruvate dehydrogenase complex dihy | 99.22 | |
| PRK06302 | 155 | acetyl-CoA carboxylase biotin carboxyl carrier pro | 99.19 | |
| PRK14042 | 596 | pyruvate carboxylase subunit B; Provisional | 99.16 | |
| cd06849 | 74 | lipoyl_domain Lipoyl domain of the dihydrolipoyl a | 99.15 | |
| TIGR02712 | 1201 | urea_carbox urea carboxylase. Members of this fami | 99.04 | |
| TIGR01108 | 582 | oadA oxaloacetate decarboxylase alpha subunit. Thi | 99.01 | |
| PRK14040 | 593 | oxaloacetate decarboxylase; Provisional | 98.98 | |
| TIGR01235 | 1143 | pyruv_carbox pyruvate carboxylase. This enzyme pla | 98.95 | |
| PRK09282 | 592 | pyruvate carboxylase subunit B; Validated | 98.88 | |
| COG4770 | 645 | Acetyl/propionyl-CoA carboxylase, alpha subunit [L | 98.86 | |
| PRK12999 | 1146 | pyruvate carboxylase; Reviewed | 98.77 | |
| COG1038 | 1149 | PycA Pyruvate carboxylase [Energy production and c | 98.65 | |
| KOG0369 | 1176 | consensus Pyruvate carboxylase [Energy production | 98.47 | |
| cd06848 | 96 | GCS_H Glycine cleavage H-protein. Glycine cleavage | 98.32 | |
| KOG0238 | 670 | consensus 3-Methylcrotonyl-CoA carboxylase, biotin | 98.14 | |
| TIGR03077 | 110 | not_gcvH glycine cleavage protein H-like protein, | 98.13 | |
| PRK00624 | 114 | glycine cleavage system protein H; Provisional | 98.01 | |
| PRK09783 | 409 | copper/silver efflux system membrane fusion protei | 97.93 | |
| PRK13380 | 144 | glycine cleavage system protein H; Provisional | 97.93 | |
| KOG0368 | 2196 | consensus Acetyl-CoA carboxylase [Lipid transport | 97.92 | |
| TIGR00998 | 334 | 8a0101 efflux pump membrane protein (multidrug res | 97.87 | |
| PRK01202 | 127 | glycine cleavage system protein H; Provisional | 97.86 | |
| PRK10559 | 310 | p-hydroxybenzoic acid efflux subunit AaeA; Provisi | 97.83 | |
| TIGR01730 | 322 | RND_mfp RND family efflux transporter, MFP subunit | 97.76 | |
| PRK10476 | 346 | multidrug resistance protein MdtN; Provisional | 97.75 | |
| PRK14843 | 347 | dihydrolipoamide acetyltransferase; Provisional | 97.61 | |
| PRK15136 | 390 | multidrug efflux system protein EmrA; Provisional | 97.6 | |
| TIGR00527 | 127 | gcvH glycine cleavage system H protein. The genome | 97.58 | |
| PRK03598 | 331 | putative efflux pump membrane fusion protein; Prov | 97.56 | |
| PRK09578 | 385 | periplasmic multidrug efflux lipoprotein precursor | 97.54 | |
| PF13533 | 50 | Biotin_lipoyl_2: Biotin-lipoyl like | 97.52 | |
| PRK15030 | 397 | multidrug efflux system transporter AcrA; Provisio | 97.51 | |
| PRK09859 | 385 | multidrug efflux system protein MdtE; Provisional | 97.42 | |
| PF13533 | 50 | Biotin_lipoyl_2: Biotin-lipoyl like | 97.38 | |
| PRK11556 | 415 | multidrug efflux system subunit MdtA; Provisional | 97.29 | |
| PF01597 | 122 | GCV_H: Glycine cleavage H-protein; InterPro: IPR00 | 97.29 | |
| PRK11578 | 370 | macrolide transporter subunit MacA; Provisional | 97.25 | |
| COG0509 | 131 | GcvH Glycine cleavage system H protein (lipoate-bi | 97.18 | |
| PF12700 | 328 | HlyD_2: HlyD family secretion protein; PDB: 3LNN_B | 97.09 | |
| TIGR02971 | 327 | heterocyst_DevB ABC exporter membrane fusion prote | 97.06 | |
| PRK12784 | 84 | hypothetical protein; Provisional | 97.05 | |
| TIGR03309 | 256 | matur_yqeB selenium-dependent molybdenum hydroxyla | 97.04 | |
| PRK05889 | 71 | putative acetyl-CoA carboxylase biotin carboxyl ca | 96.61 | |
| TIGR00999 | 265 | 8a0102 Membrane Fusion Protein cluster 2 (function | 96.35 | |
| PF13375 | 101 | RnfC_N: RnfC Barrel sandwich hybrid domain | 96.3 | |
| PRK06748 | 83 | hypothetical protein; Validated | 96.15 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 96.06 | |
| COG1566 | 352 | EmrA Multidrug resistance efflux pump [Defense mec | 96.04 | |
| cd06253 | 298 | M14_ASTE_ASPA_like_3 A functionally uncharacterize | 95.92 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 95.87 | |
| cd06250 | 359 | M14_PaAOTO_like An uncharacterized subgroup of the | 95.59 | |
| PRK08225 | 70 | acetyl-CoA carboxylase biotin carboxyl carrier pro | 95.55 | |
| cd06251 | 287 | M14_ASTE_ASPA_like_1 A functionally uncharacterize | 95.45 | |
| cd06850 | 67 | biotinyl_domain The biotinyl-domain or biotin carb | 95.44 | |
| COG0511 | 140 | AccB Biotin carboxyl carrier protein [Lipid metabo | 95.44 | |
| cd06252 | 316 | M14_ASTE_ASPA_like_2 A functionally uncharacterize | 95.43 | |
| TIGR02994 | 325 | ectoine_eutE ectoine utilization protein EutE. Mem | 95.22 | |
| PF13437 | 105 | HlyD_3: HlyD family secretion protein | 94.99 | |
| PF05896 | 257 | NQRA: Na(+)-translocating NADH-quinone reductase s | 94.73 | |
| PRK06549 | 130 | acetyl-CoA carboxylase biotin carboxyl carrier pro | 94.61 | |
| cd06254 | 288 | M14_ASTE_ASPA_like_4 A functionally uncharacterize | 94.39 | |
| PRK07051 | 80 | hypothetical protein; Validated | 94.15 | |
| PF00364 | 74 | Biotin_lipoyl: Biotin-requiring enzyme; InterPro: | 93.85 | |
| TIGR01936 | 447 | nqrA NADH:ubiquinone oxidoreductase, Na(+)-translo | 93.83 | |
| PF09891 | 150 | DUF2118: Uncharacterized protein conserved in arch | 93.8 | |
| PF00529 | 305 | HlyD: HlyD family secretion protein the correspond | 93.72 | |
| PRK05641 | 153 | putative acetyl-CoA carboxylase biotin carboxyl ca | 93.72 | |
| COG3608 | 331 | Predicted deacylase [General function prediction o | 93.55 | |
| PRK11556 | 415 | multidrug efflux system subunit MdtA; Provisional | 93.22 | |
| TIGR00998 | 334 | 8a0101 efflux pump membrane protein (multidrug res | 93.11 | |
| PRK10476 | 346 | multidrug resistance protein MdtN; Provisional | 93.1 | |
| TIGR02971 | 327 | heterocyst_DevB ABC exporter membrane fusion prote | 92.82 | |
| TIGR01235 | 1143 | pyruv_carbox pyruvate carboxylase. This enzyme pla | 92.64 | |
| PRK11578 | 370 | macrolide transporter subunit MacA; Provisional | 92.58 | |
| PRK09859 | 385 | multidrug efflux system protein MdtE; Provisional | 92.55 | |
| PRK05352 | 448 | Na(+)-translocating NADH-quinone reductase subunit | 92.51 | |
| PRK09578 | 385 | periplasmic multidrug efflux lipoprotein precursor | 92.34 | |
| PF00529 | 305 | HlyD: HlyD family secretion protein the correspond | 91.94 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 91.87 | |
| TIGR01730 | 322 | RND_mfp RND family efflux transporter, MFP subunit | 91.68 | |
| PF12700 | 328 | HlyD_2: HlyD family secretion protein; PDB: 3LNN_B | 91.51 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 91.4 | |
| COG1726 | 447 | NqrA Na+-transporting NADH:ubiquinone oxidoreducta | 91.32 | |
| TIGR01945 | 435 | rnfC electron transport complex, RnfABCDGE type, C | 91.31 | |
| PRK10559 | 310 | p-hydroxybenzoic acid efflux subunit AaeA; Provisi | 91.08 | |
| PRK15136 | 390 | multidrug efflux system protein EmrA; Provisional | 91.03 | |
| PRK15030 | 397 | multidrug efflux system transporter AcrA; Provisio | 90.84 | |
| TIGR03794 | 421 | NHPM_micro_HlyD NHPM bacteriocin system secretion | 90.84 | |
| PF00668 | 301 | Condensation: Condensation domain; InterPro: IPR00 | 90.77 | |
| PRK03598 | 331 | putative efflux pump membrane fusion protein; Prov | 90.67 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 90.65 | |
| PF07831 | 75 | PYNP_C: Pyrimidine nucleoside phosphorylase C-term | 90.43 | |
| KOG0559 | 457 | consensus Dihydrolipoamide succinyltransferase (2- | 89.7 | |
| PRK05035 | 695 | electron transport complex protein RnfC; Provision | 89.64 | |
| KOG3373 | 172 | consensus Glycine cleavage system H protein (lipoa | 89.42 | |
| PF13437 | 105 | HlyD_3: HlyD family secretion protein | 88.68 | |
| PRK09439 | 169 | PTS system glucose-specific transporter subunit; P | 88.37 | |
| TIGR00531 | 156 | BCCP acetyl-CoA carboxylase, biotin carboxyl carri | 88.2 | |
| PF00358 | 132 | PTS_EIIA_1: phosphoenolpyruvate-dependent sugar ph | 88.12 | |
| PLN02983 | 274 | biotin carboxyl carrier protein of acetyl-CoA carb | 88.11 | |
| COG4656 | 529 | RnfC Predicted NADH:ubiquinone oxidoreductase, sub | 88.05 | |
| cd06255 | 293 | M14_ASTE_ASPA_like_5 A functionally uncharacterize | 88.02 | |
| cd00210 | 124 | PTS_IIA_glc PTS_IIA, PTS system, glucose/sucrose s | 87.93 | |
| PRK09783 | 409 | copper/silver efflux system membrane fusion protei | 87.79 | |
| PRK14042 | 596 | pyruvate carboxylase subunit B; Provisional | 87.75 | |
| PF04952 | 292 | AstE_AspA: Succinylglutamate desuccinylase / Aspar | 87.39 | |
| TIGR03794 | 421 | NHPM_micro_HlyD NHPM bacteriocin system secretion | 87.03 | |
| TIGR00830 | 121 | PTBA PTS system, glucose subfamily, IIA component. | 86.83 | |
| COG4072 | 161 | Uncharacterized protein conserved in archaea [Func | 86.71 | |
| PLN02226 | 463 | 2-oxoglutarate dehydrogenase E2 component | 86.06 | |
| TIGR01108 | 582 | oadA oxaloacetate decarboxylase alpha subunit. Thi | 85.78 | |
| COG4770 | 645 | Acetyl/propionyl-CoA carboxylase, alpha subunit [L | 85.73 | |
| PF02749 | 88 | QRPTase_N: Quinolinate phosphoribosyl transferase, | 85.59 | |
| COG2190 | 156 | NagE Phosphotransferase system IIA components [Car | 85.55 | |
| PRK06302 | 155 | acetyl-CoA carboxylase biotin carboxyl carrier pro | 85.53 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 85.43 | |
| TIGR00164 | 189 | PS_decarb_rel phosphatidylserine decarboxylase pre | 85.4 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 85.17 | |
| PRK12784 | 84 | hypothetical protein; Provisional | 84.04 | |
| PRK14040 | 593 | oxaloacetate decarboxylase; Provisional | 83.69 | |
| COG0845 | 372 | AcrA Membrane-fusion protein [Cell envelope biogen | 83.69 | |
| COG2190 | 156 | NagE Phosphotransferase system IIA components [Car | 83.57 | |
| PRK05305 | 206 | phosphatidylserine decarboxylase; Provisional | 83.51 | |
| COG1566 | 352 | EmrA Multidrug resistance efflux pump [Defense mec | 83.41 | |
| PRK09282 | 592 | pyruvate carboxylase subunit B; Validated | 82.22 | |
| cd00210 | 124 | PTS_IIA_glc PTS_IIA, PTS system, glucose/sucrose s | 80.77 | |
| TIGR00830 | 121 | PTBA PTS system, glucose subfamily, IIA component. | 80.4 | |
| cd06663 | 73 | Biotinyl_lipoyl_domains Biotinyl_lipoyl_domains ar | 80.25 | |
| COG0845 | 372 | AcrA Membrane-fusion protein [Cell envelope biogen | 80.04 |
| >PRK05704 dihydrolipoamide succinyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-86 Score=667.95 Aligned_cols=384 Identities=31% Similarity=0.480 Sum_probs=327.0
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccChhhHHHH
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESEDEIAEA 80 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~~~~~~~ 80 (418)
||+||++|+||+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+.|++|++|++|++.+++...
T Consensus 7 ~P~lg~~~~eg~i~~w~v~~Gd~V~~Gd~l~~vEtdK~~~ei~a~~~G~v~~i~v~~G~~V~~G~~l~~i~~~~~~~~~- 85 (407)
T PRK05704 7 VPTLPESVTEATIATWHKKPGDAVKRDEVLVEIETDKVVLEVPAPAAGVLSEILAEEGDTVTVGQVLGRIDEGAAAGAA- 85 (407)
T ss_pred cCCCCCCCceEEEEEEEeCCcCEeCCCCEEEEEEecCceeEEecCCCEEEEEEEeCCCCEeCCCCEEEEEecCCccccc-
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999754432110
Q ss_pred HhhhhcCCCCCCCCCCCCcccccccCCCCCCCCcccccCccccccCCccCCCCCCCCccccChhHHHHHHHcCCCccccc
Q 014822 81 QAKAAASGSPSSPASETSNSAAVVAAVPHPQPEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVV 160 (418)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~ar~la~e~gidl~~v~ 160 (418)
..+ +...++ ....+. +.. . .+... ...+.+||+||+||+||||||++|+
T Consensus 86 -----~~~----~~~~~~-----~~~~~~--~~~---~-----------~~~~~-~~~~~asP~aR~lA~e~gidl~~v~ 134 (407)
T PRK05704 86 -----AAA----AAAAAA-----AAAAPA--QAQ---A-----------AAAAE-QSNDALSPAARKLAAENGLDASAVK 134 (407)
T ss_pred -----CCC----CCCCCC-----CCCCCC--CCC---C-----------CccCC-CccccCCchhhhHHhhcCCChhhCC
Confidence 000 000000 000000 000 0 00000 1135799999999999999999999
Q ss_pred cCCCCCccchhhHHHHHHhcCCCcc-cccC---CCC---CCCCceeccCCchhHHHHHHhhhc-CCcceEEEEEEEEchH
Q 014822 161 GSGPKGRIVAKDVEAEAAAAGPAAS-VAAA---GPA---GIELASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDA 232 (418)
Q Consensus 161 gtG~~Gri~~~DV~~~~~~~~~~~~-~~~~---~~~---~~~~~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~vDvt~ 232 (418)
|||++|||+++||++|+.+....+. +++. ..+ .....+.+|++++||.|+++|++| +++||||++.++|+|+
T Consensus 135 gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpls~~rk~ia~~m~~S~~~iPh~~~~~evd~~~ 214 (407)
T PRK05704 135 GTGKGGRVTKEDVLAALAAAAAAPAAPAAAAPAAAPAPLGARPEERVPMTRLRKTIAERLLEAQNTTAMLTTFNEVDMTP 214 (407)
T ss_pred CCCCCCcccHHHHHHHhhcccccCCCCCCCCCcCCCccccCCcceEeeChHHHHHHHHHHHHHhhcCCeEEEEEEEeHHH
Confidence 9999999999999999753211100 0000 000 011235689999999999999999 8999999999999999
Q ss_pred HHHHHHHHhcC-------CCCHHHHHHHHHHHHHhhCCcCcccccCCCeEEEcCceeEEEEEEeCCCeEEeEEeCCCCCC
Q 014822 233 LDALYKKIKSK-------GVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAVDGGLITPVLQDADKAD 305 (418)
Q Consensus 233 l~~~~~~~k~~-------~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~ 305 (418)
|+++|+++++. ++||++||+||+++||.+||.||++|+ ++++++|+++|||+||++++||++|||+++++++
T Consensus 215 l~~~r~~~~~~~~~~~~~kls~~~~likA~a~AL~~~P~~Na~~~-~~~i~~~~~~nIgiAv~~~~GLivPVI~~a~~~s 293 (407)
T PRK05704 215 VMDLRKQYKDAFEKKHGVKLGFMSFFVKAVVEALKRYPEVNASID-GDDIVYHNYYDIGIAVGTPRGLVVPVLRDADQLS 293 (407)
T ss_pred HHHHHHHHHhhhHhhcCCCcCHHHHHHHHHHHHHHhCcHhhcEEc-CCeEEEcCCCCeEEEEECCCceEeCcCCCcccCC
Confidence 99999998741 699999999999999999999999996 4689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCeEecCCCCCceEEEeccceeEEEEccCCeEEEEeEEEE
Q 014822 306 IYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASEPTVVATKDGRIGMKNQMQV 385 (418)
Q Consensus 306 l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~~pii~~p~~~il~iG~~~~~~v~~~~g~i~~r~~m~l 385 (418)
+.+|+++++++.+++|+|+|+++|++||||||||+|++|+.+|+||||+||++||++|++.++|++. ||++++|++|+|
T Consensus 294 l~eIa~~~~~l~~~ar~g~L~~~d~~ggTfTiSNlG~~G~~~~tpiIn~pq~aILgvG~i~~~pv~~-~g~i~~r~~~~l 372 (407)
T PRK05704 294 FAEIEKKIAELAKKARDGKLSIEELTGGTFTITNGGVFGSLMSTPIINPPQSAILGMHKIKERPVAV-NGQIVIRPMMYL 372 (407)
T ss_pred HHHHHHHHHHHHHHHHcCCCChHHcCCceEEEecCCcccccceeccccCCcEEEEEcccceEEeEEE-CCEEEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999986 799999999999
Q ss_pred EEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 386 NVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 386 slt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
||+||||+|||+++++||++|+++||+|+.||+
T Consensus 373 sls~DHRviDGa~aa~Fl~~l~~~le~p~~ll~ 405 (407)
T PRK05704 373 ALSYDHRIIDGKEAVGFLVTIKELLEDPERLLL 405 (407)
T ss_pred EEEechhhhCcHHHHHHHHHHHHHhhCHHHHhh
Confidence 999999999999999999999999999998764
|
|
| >TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) | Back alignment and domain information |
|---|
| >PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | Back alignment and domain information |
|---|
| >PLN02528 2-oxoisovalerate dehydrogenase E2 component | Back alignment and domain information |
|---|
| >TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase | Back alignment and domain information |
|---|
| >TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form | Back alignment and domain information |
|---|
| >TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form | Back alignment and domain information |
|---|
| >KOG0557 consensus Dihydrolipoamide acetyltransferase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed | Back alignment and domain information |
|---|
| >PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated | Back alignment and domain information |
|---|
| >PRK11855 dihydrolipoamide acetyltransferase; Reviewed | Back alignment and domain information |
|---|
| >COG0508 AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] | Back alignment and domain information |
|---|
| >PLN02226 2-oxoglutarate dehydrogenase E2 component | Back alignment and domain information |
|---|
| >PTZ00144 dihydrolipoamide succinyltransferase; Provisional | Back alignment and domain information |
|---|
| >KOG0558 consensus Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit) [Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK14843 dihydrolipoamide acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK11857 dihydrolipoamide acetyltransferase; Reviewed | Back alignment and domain information |
|---|
| >KOG0559 consensus Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit) [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2 | Back alignment and domain information |
|---|
| >PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2 | Back alignment and domain information |
|---|
| >PRK13757 chloramphenicol acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF00364 Biotin_lipoyl: Biotin-requiring enzyme; InterPro: IPR000089 The biotin / lipoyl attachment domain has a conserved lysine residue that binds biotin or lipoic acid | Back alignment and domain information |
|---|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK06748 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK05889 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Provisional | Back alignment and domain information |
|---|
| >cd06663 Biotinyl_lipoyl_domains Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS) | Back alignment and domain information |
|---|
| >PRK11892 pyruvate dehydrogenase subunit beta; Provisional | Back alignment and domain information |
|---|
| >COG0511 AccB Biotin carboxyl carrier protein [Lipid metabolism] | Back alignment and domain information |
|---|
| >PRK08225 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | Back alignment and domain information |
|---|
| >PF02817 E3_binding: e3 binding domain; InterPro: IPR004167 A small domain of the E2 subunit of 2-oxo-acid dehydrogenases that is responsible for the binding of the E3 subunit | Back alignment and domain information |
|---|
| >PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated | Back alignment and domain information |
|---|
| >PRK06549 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | Back alignment and domain information |
|---|
| >TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase | Back alignment and domain information |
|---|
| >PRK05641 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | Back alignment and domain information |
|---|
| >PRK07051 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >cd06850 biotinyl_domain The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase | Back alignment and domain information |
|---|
| >PLN02983 biotin carboxyl carrier protein of acetyl-CoA carboxylase | Back alignment and domain information |
|---|
| >PRK11855 dihydrolipoamide acetyltransferase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00531 BCCP acetyl-CoA carboxylase, biotin carboxyl carrier protein | Back alignment and domain information |
|---|
| >TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form | Back alignment and domain information |
|---|
| >PRK06302 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | Back alignment and domain information |
|---|
| >PRK14042 pyruvate carboxylase subunit B; Provisional | Back alignment and domain information |
|---|
| >cd06849 lipoyl_domain Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases | Back alignment and domain information |
|---|
| >TIGR02712 urea_carbox urea carboxylase | Back alignment and domain information |
|---|
| >TIGR01108 oadA oxaloacetate decarboxylase alpha subunit | Back alignment and domain information |
|---|
| >PRK14040 oxaloacetate decarboxylase; Provisional | Back alignment and domain information |
|---|
| >TIGR01235 pyruv_carbox pyruvate carboxylase | Back alignment and domain information |
|---|
| >PRK09282 pyruvate carboxylase subunit B; Validated | Back alignment and domain information |
|---|
| >COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] | Back alignment and domain information |
|---|
| >PRK12999 pyruvate carboxylase; Reviewed | Back alignment and domain information |
|---|
| >COG1038 PycA Pyruvate carboxylase [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0369 consensus Pyruvate carboxylase [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd06848 GCS_H Glycine cleavage H-protein | Back alignment and domain information |
|---|
| >KOG0238 consensus 3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03077 not_gcvH glycine cleavage protein H-like protein, Chlamydial | Back alignment and domain information |
|---|
| >PRK00624 glycine cleavage system protein H; Provisional | Back alignment and domain information |
|---|
| >PRK09783 copper/silver efflux system membrane fusion protein CusB; Provisional | Back alignment and domain information |
|---|
| >PRK13380 glycine cleavage system protein H; Provisional | Back alignment and domain information |
|---|
| >KOG0368 consensus Acetyl-CoA carboxylase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00998 8a0101 efflux pump membrane protein (multidrug resistance protein A) | Back alignment and domain information |
|---|
| >PRK01202 glycine cleavage system protein H; Provisional | Back alignment and domain information |
|---|
| >PRK10559 p-hydroxybenzoic acid efflux subunit AaeA; Provisional | Back alignment and domain information |
|---|
| >TIGR01730 RND_mfp RND family efflux transporter, MFP subunit | Back alignment and domain information |
|---|
| >PRK10476 multidrug resistance protein MdtN; Provisional | Back alignment and domain information |
|---|
| >PRK14843 dihydrolipoamide acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK15136 multidrug efflux system protein EmrA; Provisional | Back alignment and domain information |
|---|
| >TIGR00527 gcvH glycine cleavage system H protein | Back alignment and domain information |
|---|
| >PRK03598 putative efflux pump membrane fusion protein; Provisional | Back alignment and domain information |
|---|
| >PRK09578 periplasmic multidrug efflux lipoprotein precursor; Reviewed | Back alignment and domain information |
|---|
| >PF13533 Biotin_lipoyl_2: Biotin-lipoyl like | Back alignment and domain information |
|---|
| >PRK15030 multidrug efflux system transporter AcrA; Provisional | Back alignment and domain information |
|---|
| >PRK09859 multidrug efflux system protein MdtE; Provisional | Back alignment and domain information |
|---|
| >PF13533 Biotin_lipoyl_2: Biotin-lipoyl like | Back alignment and domain information |
|---|
| >PRK11556 multidrug efflux system subunit MdtA; Provisional | Back alignment and domain information |
|---|
| >PF01597 GCV_H: Glycine cleavage H-protein; InterPro: IPR002930 This is a family of glycine cleavage H-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes | Back alignment and domain information |
|---|
| >PRK11578 macrolide transporter subunit MacA; Provisional | Back alignment and domain information |
|---|
| >COG0509 GcvH Glycine cleavage system H protein (lipoate-binding) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF12700 HlyD_2: HlyD family secretion protein; PDB: 3LNN_B 4DK0_A 4DK1_C 3FPP_B 2K32_A 2K33_A 3OW7_B 3OOC_A 3T53_B 4DNT_C | Back alignment and domain information |
|---|
| >TIGR02971 heterocyst_DevB ABC exporter membrane fusion protein, DevB family | Back alignment and domain information |
|---|
| >PRK12784 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03309 matur_yqeB selenium-dependent molybdenum hydroxylase system protein, YqeB family | Back alignment and domain information |
|---|
| >PRK05889 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00999 8a0102 Membrane Fusion Protein cluster 2 (function with RND porters) | Back alignment and domain information |
|---|
| >PF13375 RnfC_N: RnfC Barrel sandwich hybrid domain | Back alignment and domain information |
|---|
| >PRK06748 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >COG1566 EmrA Multidrug resistance efflux pump [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
| >cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases | Back alignment and domain information |
|---|
| >PRK08225 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | Back alignment and domain information |
|---|
| >cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases | Back alignment and domain information |
|---|
| >cd06850 biotinyl_domain The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase | Back alignment and domain information |
|---|
| >COG0511 AccB Biotin carboxyl carrier protein [Lipid metabolism] | Back alignment and domain information |
|---|
| >cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases | Back alignment and domain information |
|---|
| >TIGR02994 ectoine_eutE ectoine utilization protein EutE | Back alignment and domain information |
|---|
| >PF13437 HlyD_3: HlyD family secretion protein | Back alignment and domain information |
|---|
| >PF05896 NQRA: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); InterPro: IPR008703 This family consists of several bacterial Na+-translocating NADH-quinone reductase subunit A (NQRA) proteins | Back alignment and domain information |
|---|
| >PRK06549 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | Back alignment and domain information |
|---|
| >cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases | Back alignment and domain information |
|---|
| >PRK07051 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF00364 Biotin_lipoyl: Biotin-requiring enzyme; InterPro: IPR000089 The biotin / lipoyl attachment domain has a conserved lysine residue that binds biotin or lipoic acid | Back alignment and domain information |
|---|
| >TIGR01936 nqrA NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit | Back alignment and domain information |
|---|
| >PF09891 DUF2118: Uncharacterized protein conserved in archaea (DUF2118); InterPro: IPR019217 This entry represents a family of hypothetical proteins of unknown function | Back alignment and domain information |
|---|
| >PF00529 HlyD: HlyD family secretion protein the corresponding Prosite entry | Back alignment and domain information |
|---|
| >PRK05641 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | Back alignment and domain information |
|---|
| >COG3608 Predicted deacylase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK11556 multidrug efflux system subunit MdtA; Provisional | Back alignment and domain information |
|---|
| >TIGR00998 8a0101 efflux pump membrane protein (multidrug resistance protein A) | Back alignment and domain information |
|---|
| >PRK10476 multidrug resistance protein MdtN; Provisional | Back alignment and domain information |
|---|
| >TIGR02971 heterocyst_DevB ABC exporter membrane fusion protein, DevB family | Back alignment and domain information |
|---|
| >TIGR01235 pyruv_carbox pyruvate carboxylase | Back alignment and domain information |
|---|
| >PRK11578 macrolide transporter subunit MacA; Provisional | Back alignment and domain information |
|---|
| >PRK09859 multidrug efflux system protein MdtE; Provisional | Back alignment and domain information |
|---|
| >PRK05352 Na(+)-translocating NADH-quinone reductase subunit A; Provisional | Back alignment and domain information |
|---|
| >PRK09578 periplasmic multidrug efflux lipoprotein precursor; Reviewed | Back alignment and domain information |
|---|
| >PF00529 HlyD: HlyD family secretion protein the corresponding Prosite entry | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >TIGR01730 RND_mfp RND family efflux transporter, MFP subunit | Back alignment and domain information |
|---|
| >PF12700 HlyD_2: HlyD family secretion protein; PDB: 3LNN_B 4DK0_A 4DK1_C 3FPP_B 2K32_A 2K33_A 3OW7_B 3OOC_A 3T53_B 4DNT_C | Back alignment and domain information |
|---|
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
|---|
| >COG1726 NqrA Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01945 rnfC electron transport complex, RnfABCDGE type, C subunit | Back alignment and domain information |
|---|
| >PRK10559 p-hydroxybenzoic acid efflux subunit AaeA; Provisional | Back alignment and domain information |
|---|
| >PRK15136 multidrug efflux system protein EmrA; Provisional | Back alignment and domain information |
|---|
| >PRK15030 multidrug efflux system transporter AcrA; Provisional | Back alignment and domain information |
|---|
| >TIGR03794 NHPM_micro_HlyD NHPM bacteriocin system secretion protein | Back alignment and domain information |
|---|
| >PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics | Back alignment and domain information |
|---|
| >PRK03598 putative efflux pump membrane fusion protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF07831 PYNP_C: Pyrimidine nucleoside phosphorylase C-terminal domain; InterPro: IPR013102 This domain is found at the C-terminal end of the large alpha/beta domain making up various pyrimidine nucleoside phosphorylases [, ] | Back alignment and domain information |
|---|
| >KOG0559 consensus Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit) [Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK05035 electron transport complex protein RnfC; Provisional | Back alignment and domain information |
|---|
| >KOG3373 consensus Glycine cleavage system H protein (lipoate-binding) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF13437 HlyD_3: HlyD family secretion protein | Back alignment and domain information |
|---|
| >PRK09439 PTS system glucose-specific transporter subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00531 BCCP acetyl-CoA carboxylase, biotin carboxyl carrier protein | Back alignment and domain information |
|---|
| >PF00358 PTS_EIIA_1: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; InterPro: IPR001127 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria | Back alignment and domain information |
|---|
| >PLN02983 biotin carboxyl carrier protein of acetyl-CoA carboxylase | Back alignment and domain information |
|---|
| >COG4656 RnfC Predicted NADH:ubiquinone oxidoreductase, subunit RnfC [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases | Back alignment and domain information |
|---|
| >cd00210 PTS_IIA_glc PTS_IIA, PTS system, glucose/sucrose specific IIA subunit | Back alignment and domain information |
|---|
| >PRK09783 copper/silver efflux system membrane fusion protein CusB; Provisional | Back alignment and domain information |
|---|
| >PRK14042 pyruvate carboxylase subunit B; Provisional | Back alignment and domain information |
|---|
| >PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3 | Back alignment and domain information |
|---|
| >TIGR03794 NHPM_micro_HlyD NHPM bacteriocin system secretion protein | Back alignment and domain information |
|---|
| >TIGR00830 PTBA PTS system, glucose subfamily, IIA component | Back alignment and domain information |
|---|
| >COG4072 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
| >PLN02226 2-oxoglutarate dehydrogenase E2 component | Back alignment and domain information |
|---|
| >TIGR01108 oadA oxaloacetate decarboxylase alpha subunit | Back alignment and domain information |
|---|
| >COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] | Back alignment and domain information |
|---|
| >PF02749 QRPTase_N: Quinolinate phosphoribosyl transferase, N-terminal domain; InterPro: IPR022412 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2 | Back alignment and domain information |
|---|
| >COG2190 NagE Phosphotransferase system IIA components [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06302 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >TIGR00164 PS_decarb_rel phosphatidylserine decarboxylase precursor-related protein | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >PRK12784 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK14040 oxaloacetate decarboxylase; Provisional | Back alignment and domain information |
|---|
| >COG0845 AcrA Membrane-fusion protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG2190 NagE Phosphotransferase system IIA components [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05305 phosphatidylserine decarboxylase; Provisional | Back alignment and domain information |
|---|
| >COG1566 EmrA Multidrug resistance efflux pump [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK09282 pyruvate carboxylase subunit B; Validated | Back alignment and domain information |
|---|
| >cd00210 PTS_IIA_glc PTS_IIA, PTS system, glucose/sucrose specific IIA subunit | Back alignment and domain information |
|---|
| >TIGR00830 PTBA PTS system, glucose subfamily, IIA component | Back alignment and domain information |
|---|
| >cd06663 Biotinyl_lipoyl_domains Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS) | Back alignment and domain information |
|---|
| >COG0845 AcrA Membrane-fusion protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 418 | ||||
| 3b8k_A | 239 | Structure Of The Truncated Human Dihydrolipoyl Acet | 2e-23 | ||
| 3duf_I | 428 | Snapshots Of Catalysis In The E1 Subunit Of The Pyr | 7e-21 | ||
| 1c4t_A | 233 | Catalytic Domain From Trimeric Dihydrolipoamide Suc | 2e-17 | ||
| 1b5s_A | 242 | Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalyt | 1e-15 | ||
| 3l60_A | 250 | Crystal Structure Of Branched-Chain Alpha-Keto Acid | 1e-14 | ||
| 2ihw_A | 262 | Crystal Structure Of A Cubic Core Of The Dihydrolip | 2e-12 | ||
| 3mae_A | 256 | Crystal Structure Of Probable Dihydrolipamide Acety | 3e-12 | ||
| 3rqc_A | 224 | Crystal Structure Of The Catalytic Core Of The 2-Ox | 1e-10 | ||
| 1zy8_L | 229 | The Crystal Structure Of Dihydrolipoamide Dehydroge | 3e-10 | ||
| 1y8n_B | 128 | Crystal Structure Of The Pdk3-L2 Complex Length = 1 | 2e-09 | ||
| 2dnc_A | 98 | Solution Structure Of Rsgi Ruh-054, A Lipoyl Domain | 3e-09 | ||
| 1fyc_A | 106 | Inner Lipoyl Domain From Human Pyruvate Dehydrogena | 3e-09 | ||
| 3crk_C | 87 | Crystal Structure Of The Pdhk2-L2 Complex. Length = | 1e-08 | ||
| 2dne_A | 108 | Solution Structure Of Rsgi Ruh-058, A Lipoyl Domain | 2e-08 | ||
| 1eaa_A | 243 | Atomic Structure Of The Cubic Core Of The Pyruvate | 2e-07 | ||
| 1dpc_A | 243 | Crystallographic And Enzymatic Investigations On Th | 3e-07 | ||
| 1dpd_A | 243 | Crystallographic And Enzymatic Investigations On Th | 5e-07 | ||
| 1dpb_A | 243 | Crystallographic And Enzymatic Investigations On Th | 4e-06 | ||
| 2xt6_A | 1113 | Crystal Structure Of Mycobacterium Smegmatis Alpha- | 1e-04 | ||
| 2l5t_A | 77 | Solution Nmr Structure Of E2 Lipoyl Domain From The | 2e-04 | ||
| 1lab_A | 80 | Three-Dimensional Structure Of The Lipoyl Domain Fr | 2e-04 |
| >pdb|3B8K|A Chain A, Structure Of The Truncated Human Dihydrolipoyl Acetyltransferase (E2) Length = 239 | Back alignment and structure |
|
| >pdb|3DUF|I Chain I, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex Length = 428 | Back alignment and structure |
| >pdb|1C4T|A Chain A, Catalytic Domain From Trimeric Dihydrolipoamide Succinyltransferase Length = 233 | Back alignment and structure |
| >pdb|1B5S|A Chain A, Dihydrolipoyl Transacetylase (E.C.2.3.1.12) Catalytic Domain (Residues 184-425) From Bacillus Stearothermophilus Length = 242 | Back alignment and structure |
| >pdb|3L60|A Chain A, Crystal Structure Of Branched-Chain Alpha-Keto Acid Dehydrogenase Subunit E2 From Mycobacterium Tuberculosis Length = 250 | Back alignment and structure |
| >pdb|2IHW|A Chain A, Crystal Structure Of A Cubic Core Of The Dihydrolipoamide Acyltransferase (E2b) Component In The Branched-Chain Alpha-Ketoacid Dehydrogenase Complex (Bckdc), Apo Form Length = 262 | Back alignment and structure |
| >pdb|3MAE|A Chain A, Crystal Structure Of Probable Dihydrolipamide Acetyltransferase From Listeria Monocytogenes 4b F2365 Length = 256 | Back alignment and structure |
| >pdb|3RQC|A Chain A, Crystal Structure Of The Catalytic Core Of The 2-Oxoacid Dehydrogenase Multienzyme Complex From Thermoplasma Acidophilum Length = 224 | Back alignment and structure |
| >pdb|1Y8N|B Chain B, Crystal Structure Of The Pdk3-L2 Complex Length = 128 | Back alignment and structure |
| >pdb|2DNC|A Chain A, Solution Structure Of Rsgi Ruh-054, A Lipoyl Domain From Human 2-Oxoacid Dehydrogenase Length = 98 | Back alignment and structure |
| >pdb|1FYC|A Chain A, Inner Lipoyl Domain From Human Pyruvate Dehydrogenase (Pdh) Complex, Nmr, 1 Structure Length = 106 | Back alignment and structure |
| >pdb|3CRK|C Chain C, Crystal Structure Of The Pdhk2-L2 Complex. Length = 87 | Back alignment and structure |
| >pdb|2DNE|A Chain A, Solution Structure Of Rsgi Ruh-058, A Lipoyl Domain Of Human 2-Oxoacid Dehydrogenase Length = 108 | Back alignment and structure |
| >pdb|1EAA|A Chain A, Atomic Structure Of The Cubic Core Of The Pyruvate Dehydrogenase Multienzyme Complex Length = 243 | Back alignment and structure |
| >pdb|1DPC|A Chain A, Crystallographic And Enzymatic Investigations On The Role Of Ser558, His610 And Asn614 In The Catalytic Mechanism Of Azotobacter Vinelandii Dihydrolipoamide Acetyltransferase (E2p) Length = 243 | Back alignment and structure |
| >pdb|1DPD|A Chain A, Crystallographic And Enzymatic Investigations On The Role Of Ser558, His610 And Asn614 In The Catalytic Mechanism Of Azotobacter Vinelandii Dihydrolipoamide Acetyltransferase (E2p) Length = 243 | Back alignment and structure |
| >pdb|1DPB|A Chain A, Crystallographic And Enzymatic Investigations On The Role Of Ser558, His610 And Asn614 In The Catalytic Mechanism Of Azotobacter Vinelandii Dihydrolipoamide Acetyltransferase (E2p) Length = 243 | Back alignment and structure |
| >pdb|2XT6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase Homodimer (Orthorhombic Form) Length = 1113 | Back alignment and structure |
| >pdb|2L5T|A Chain A, Solution Nmr Structure Of E2 Lipoyl Domain From Thermoplasma Acidophilum Length = 77 | Back alignment and structure |
| >pdb|1LAB|A Chain A, Three-Dimensional Structure Of The Lipoyl Domain From Bacillus Stearothermophilus Pyruvate Dehydrogenase Multienzyme Complex Length = 80 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A Length = 428 | Back alignment and structure |
|---|
Score = 247 bits (633), Expect = 4e-78
Identities = 107/441 (24%), Positives = 190/441 (43%), Gaps = 48/441 (10%)
Query: 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV 60
+P + + EG+IV W GD++ + + + V++DKA +++ + G + +I+V EG V
Sbjct: 7 LPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTV 66
Query: 61 ASVGSAIALLAESEDEIAEAQAKAAASGSPSSPASETSNSAAVVAAVPHPQPEKVKLAEP 120
A+VG + L E + + S V A P+ +
Sbjct: 67 ATVGQTLITLDAPGYENMTFKGQEQEEAKKEEKTETVSKEEKVDAVAPNAPAAE------ 120
Query: 121 AAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEA--EAA 178
+ +R++A P +K A E V++ V G+G GR++ +D++A
Sbjct: 121 ----------AEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGG 170
Query: 179 AAGPAASVAAAGPAGIELASV---------VPFTTMQGAVSRNMVESLA-VPTFRVGYTI 228
A A+ + + ++ A+++ MV S P
Sbjct: 171 AKPAPAAAEEKAAPAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHV------ 224
Query: 229 TT------DALDALYKKIKS----KGV--TMTALLAKATALALVQHPVVNSSC-RDGNSF 275
T L A KK K+ KG+ T + KA AL ++PV+N+S +
Sbjct: 225 TLMDEADVTKLVAHRKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEI 284
Query: 276 IYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTF 335
I NI +A D GL+ PV++ AD+ I+ L+++ EL +KAR L P E +
Sbjct: 285 IQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMKGASC 344
Query: 336 TLSNLGMFGVDRFDAILPPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIY 395
T++N+G G F ++ AI+ +G + +DG I + ++++ DHR+I
Sbjct: 345 TITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIV-RDGEIVAAPMLALSLSFDHRMID 403
Query: 396 GADLASFLQTLAKIIEDPRDL 416
GA L + +++ DP L
Sbjct: 404 GATAQKALNHIKRLLSDPELL 424
|
| >3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
| >3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} Length = 250 | Back alignment and structure |
|---|
| >2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A* Length = 262 | Back alignment and structure |
|---|
| >1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A Length = 243 | Back alignment and structure |
|---|
| >3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728} Length = 224 | Back alignment and structure |
|---|
| >3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes} Length = 256 | Back alignment and structure |
|---|
| >1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A* Length = 219 | Back alignment and structure |
|---|
| >3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* Length = 213 | Back alignment and structure |
|---|
| >1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A Length = 128 | Back alignment and structure |
|---|
| >2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens} Length = 108 | Back alignment and structure |
|---|
| >2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98 | Back alignment and structure |
|---|
| >1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A Length = 233 | Back alignment and structure |
|---|
| >2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron} Length = 217 | Back alignment and structure |
|---|
| >3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C* Length = 87 | Back alignment and structure |
|---|
| >2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Length = 1113 | Back alignment and structure |
|---|
| >1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A Length = 62 | Back alignment and structure |
|---|
| >1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A Length = 93 | Back alignment and structure |
|---|
| >2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum} Length = 77 | Back alignment and structure |
|---|
| >1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C* Length = 49 | Back alignment and structure |
|---|
| >3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} PDB: 1zwv_A Length = 58 | Back alignment and structure |
|---|
| >2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus} Length = 41 | Back alignment and structure |
|---|
| >2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus} Length = 40 | Back alignment and structure |
|---|
| >2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens} Length = 70 | Back alignment and structure |
|---|
| >1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A Length = 79 | Back alignment and structure |
|---|
| >1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1 Length = 80 | Back alignment and structure |
|---|
| >1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A Length = 51 | Back alignment and structure |
|---|
| >2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli} Length = 85 | Back alignment and structure |
|---|
| >2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus} Length = 40 | Back alignment and structure |
|---|
| >2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens} Length = 84 | Back alignment and structure |
|---|
| >1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A Length = 79 | Back alignment and structure |
|---|
| >1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1 Length = 80 | Back alignment and structure |
|---|
| >1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1 Length = 81 | Back alignment and structure |
|---|
| >2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 100 | Back alignment and structure |
|---|
| >3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} Length = 1236 | Back alignment and structure |
|---|
| >1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A* Length = 72 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 418 | |||
| 3dva_I | 428 | Dihydrolipoyllysine-residue acetyltransferase comp | 100.0 | |
| 3l60_A | 250 | Branched-chain alpha-keto acid dehydrogenase; stru | 100.0 | |
| 1scz_A | 233 | E2, dihydrolipoamide succinyltransferase; COA-depe | 100.0 | |
| 1dpb_A | 243 | Dihydrolipoyl-transacetylase; dihydrolipoamide ace | 100.0 | |
| 2ii3_A | 262 | Lipoamide acyltransferase component of branched-C | 100.0 | |
| 3mae_A | 256 | 2-oxoisovalerate dehydrogenase E2 component, dihyd | 100.0 | |
| 3b8k_A | 239 | PDCE2;, dihydrolipoyllysine-residue acetyltransfer | 100.0 | |
| 3rqc_A | 224 | Probable lipoamide acyltransferase; alpha beta fol | 100.0 | |
| 1q23_A | 219 | Chloramphenicol acetyltransferase; CAT I, trimer, | 100.0 | |
| 3cla_A | 213 | Type III chloramphenicol acetyltransferase; transf | 100.0 | |
| 2xt6_A | 1113 | 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET | 100.0 | |
| 2i9d_A | 217 | Chloramphenicol acetyltransferase; structural geno | 100.0 | |
| 1zy8_K | 229 | Pyruvate dehydrogenase protein X component, mitoch | 99.96 | |
| 2dne_A | 108 | Dihydrolipoyllysine-residue acetyltransferase comp | 99.77 | |
| 1y8o_B | 128 | Dihydrolipoyllysine-residue acetyltransferase COM | 99.75 | |
| 3crk_C | 87 | Dihydrolipoyllysine-residue acetyltransferase COM | 99.74 | |
| 2dnc_A | 98 | Pyruvate dehydrogenase protein X component; lipoic | 99.72 | |
| 1k8m_A | 93 | E2 component of branched-chain ahpha-ketoacid dehy | 99.71 | |
| 1ghj_A | 79 | E2, E2, the dihydrolipoamide succinyltransferase c | 99.68 | |
| 2l5t_A | 77 | Lipoamide acyltransferase; E2 lipoyl domain; NMR { | 99.63 | |
| 1pmr_A | 80 | Dihydrolipoyl succinyltransferase; 2-oxoglutarate | 99.62 | |
| 1qjo_A | 80 | Dihydrolipoamide acetyltransferase; lipoyl domain, | 99.61 | |
| 1iyu_A | 79 | E2P, dihydrolipoamide acetyltransferase component | 99.58 | |
| 1gjx_A | 81 | Pyruvate dehydrogenase; oxidoreductase, lipoyl dom | 99.55 | |
| 1z6h_A | 72 | Biotin/lipoyl attachment protein; solution structu | 99.41 | |
| 2kcc_A | 84 | Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, | 99.39 | |
| 2k7v_A | 85 | Dihydrolipoyllysine-residue acetyltransferase comp | 99.37 | |
| 2dn8_A | 100 | Acetyl-COA carboxylase 2; biotin required enzyme, | 99.34 | |
| 2d5d_A | 74 | Methylmalonyl-COA decarboxylase gamma chain; bioti | 99.3 | |
| 1dcz_A | 77 | Transcarboxylase 1.3S subunit; antiparallel beta s | 99.29 | |
| 2jku_A | 94 | Propionyl-COA carboxylase alpha chain, mitochondri | 99.28 | |
| 1bdo_A | 80 | Acetyl-COA carboxylase; BCCPSC, carboxyl transfera | 99.27 | |
| 2eq9_C | 41 | Pyruvate dehydrogenase complex, dihydrolipoamide a | 99.27 | |
| 3rnm_E | 58 | Lipoamide acyltransferase component of branched-C | 99.25 | |
| 2ejm_A | 99 | Methylcrotonoyl-COA carboxylase subunit alpha; bio | 99.24 | |
| 2eq8_C | 40 | Pyruvate dehydrogenase complex, dihydrolipoamide a | 99.23 | |
| 2eq7_C | 40 | 2-oxoglutarate dehydrogenase E2 component; protein | 99.2 | |
| 3n6r_A | 681 | Propionyl-COA carboxylase, alpha subunit; protein | 99.15 | |
| 1w85_I | 49 | Dihydrolipoyllysine-residue acetyltransferase comp | 99.13 | |
| 1w4i_A | 62 | Pyruvate dehydrogenase E2; transferase, peripheral | 99.12 | |
| 3va7_A | 1236 | KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A | 99.08 | |
| 1bal_A | 51 | Dihydrolipoamide succinyltransferase; glycolysis; | 99.07 | |
| 2f60_K | 64 | Pyruvate dehydrogenase protein X component; protei | 99.07 | |
| 3hbl_A | 1150 | Pyruvate carboxylase; TIM barrel, ligase; HET: BTI | 99.06 | |
| 3u9t_A | 675 | MCC alpha, methylcrotonyl-COA carboxylase, alpha-s | 99.06 | |
| 2coo_A | 70 | Lipoamide acyltransferase component of branched- c | 99.05 | |
| 2k32_A | 116 | A; NMR {Campylobacter jejuni} PDB: 2k33_A* | 98.86 | |
| 1zko_A | 136 | Glycine cleavage system H protein; TM0212, structu | 98.83 | |
| 3bg3_A | 718 | Pyruvate carboxylase, mitochondrial; TIM barrel, A | 98.81 | |
| 2qf7_A | 1165 | Pyruvate carboxylase protein; multi-domain, multi- | 98.75 | |
| 1hpc_A | 131 | H protein of the glycine cleavage system; transit | 98.42 | |
| 1onl_A | 128 | Glycine cleavage system H protein; hybrid barrel-s | 98.41 | |
| 3a7l_A | 128 | H-protein, glycine cleavage system H protein; lipo | 98.38 | |
| 3ne5_B | 413 | Cation efflux system protein CUSB; transmembrane h | 97.98 | |
| 2f1m_A | 277 | Acriflavine resistance protein A; helical hairpin, | 97.95 | |
| 3lnn_A | 359 | Membrane fusion protein (MFP) heavy metal cation Z | 97.94 | |
| 3fpp_A | 341 | Macrolide-specific efflux protein MACA; hexameric | 97.91 | |
| 3klr_A | 125 | Glycine cleavage system H protein; antiparallel be | 97.88 | |
| 3mxu_A | 143 | Glycine cleavage system H protein; seattle structu | 97.75 | |
| 3tzu_A | 137 | GCVH, glycine cleavage system H protein 1; ssgcid, | 97.71 | |
| 1vf7_A | 369 | Multidrug resistance protein MEXA; alpha hairpin, | 97.66 | |
| 3hgb_A | 155 | Glycine cleavage system H protein; ssgcid, niaid, | 97.48 | |
| 4dk0_A | 369 | Putative MACA; alpha-hairpin, lipoyl, beta-barrel, | 97.29 | |
| 3na6_A | 331 | Succinylglutamate desuccinylase/aspartoacylase; st | 96.68 | |
| 2dn8_A | 100 | Acetyl-COA carboxylase 2; biotin required enzyme, | 96.62 | |
| 3cdx_A | 354 | Succinylglutamatedesuccinylase/aspartoacylase; str | 96.49 | |
| 3fmc_A | 368 | Putative succinylglutamate desuccinylase / aspart; | 96.44 | |
| 1z6h_A | 72 | Biotin/lipoyl attachment protein; solution structu | 96.02 | |
| 2d5d_A | 74 | Methylmalonyl-COA decarboxylase gamma chain; bioti | 95.9 | |
| 1dcz_A | 77 | Transcarboxylase 1.3S subunit; antiparallel beta s | 95.89 | |
| 1f3z_A | 161 | EIIA-GLC, glucose-specific phosphocarrier; phospho | 95.73 | |
| 2k32_A | 116 | A; NMR {Campylobacter jejuni} PDB: 2k33_A* | 95.56 | |
| 2gpr_A | 154 | Glucose-permease IIA component; phosphotransferase | 95.37 | |
| 2kcc_A | 84 | Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, | 95.22 | |
| 1ax3_A | 162 | Iiaglc, glucose permease IIA domain; phosphotransf | 95.11 | |
| 2qj8_A | 332 | MLR6093 protein; structural genomics, joint center | 94.78 | |
| 2f1m_A | 277 | Acriflavine resistance protein A; helical hairpin, | 94.54 | |
| 2jku_A | 94 | Propionyl-COA carboxylase alpha chain, mitochondri | 94.46 | |
| 2xha_A | 193 | NUSG, transcription antitermination protein NUSG; | 94.42 | |
| 2ejm_A | 99 | Methylcrotonoyl-COA carboxylase subunit alpha; bio | 94.29 | |
| 1bdo_A | 80 | Acetyl-COA carboxylase; BCCPSC, carboxyl transfera | 93.83 | |
| 3fpp_A | 341 | Macrolide-specific efflux protein MACA; hexameric | 93.32 | |
| 3lnn_A | 359 | Membrane fusion protein (MFP) heavy metal cation Z | 92.89 | |
| 2l5t_A | 77 | Lipoamide acyltransferase; E2 lipoyl domain; NMR { | 92.55 | |
| 3d4r_A | 169 | Domain of unknown function from the PFAM-B_34464; | 92.27 | |
| 1gjx_A | 81 | Pyruvate dehydrogenase; oxidoreductase, lipoyl dom | 91.92 | |
| 1qjo_A | 80 | Dihydrolipoamide acetyltransferase; lipoyl domain, | 91.82 | |
| 2xhc_A | 352 | Transcription antitermination protein NUSG; 2.45A | 91.82 | |
| 4hvm_A | 493 | Tlmii; PSI-biology, midwest center for structural | 91.79 | |
| 2k7v_A | 85 | Dihydrolipoyllysine-residue acetyltransferase comp | 91.72 | |
| 1k8m_A | 93 | E2 component of branched-chain ahpha-ketoacid dehy | 91.68 | |
| 1ghj_A | 79 | E2, E2, the dihydrolipoamide succinyltransferase c | 91.54 | |
| 3crk_C | 87 | Dihydrolipoyllysine-residue acetyltransferase COM | 91.51 | |
| 2dnc_A | 98 | Pyruvate dehydrogenase protein X component; lipoic | 90.9 | |
| 3ne5_B | 413 | Cation efflux system protein CUSB; transmembrane h | 90.7 | |
| 1vf7_A | 369 | Multidrug resistance protein MEXA; alpha hairpin, | 90.41 | |
| 1l5a_A | 436 | Amide synthase, VIBH; nonribosomal peptide synthet | 89.86 | |
| 1iyu_A | 79 | E2P, dihydrolipoamide acetyltransferase component | 89.57 | |
| 4dk0_A | 369 | Putative MACA; alpha-hairpin, lipoyl, beta-barrel, | 89.42 | |
| 2dne_A | 108 | Dihydrolipoyllysine-residue acetyltransferase comp | 88.98 | |
| 2auk_A | 190 | DNA-directed RNA polymerase beta' chain; sandwich- | 88.9 | |
| 1y8o_B | 128 | Dihydrolipoyllysine-residue acetyltransferase COM | 88.9 | |
| 2xha_A | 193 | NUSG, transcription antitermination protein NUSG; | 88.23 | |
| 1pmr_A | 80 | Dihydrolipoyl succinyltransferase; 2-oxoglutarate | 88.12 | |
| 3fot_A | 519 | 15-O-acetyltransferase; fusarium head blight, tric | 88.04 | |
| 3our_B | 183 | EIIA, phosphotransferase system IIA component; exh | 87.66 | |
| 3n6r_A | 681 | Propionyl-COA carboxylase, alpha subunit; protein | 87.49 | |
| 3bg3_A | 718 | Pyruvate carboxylase, mitochondrial; TIM barrel, A | 82.45 | |
| 3hbl_A | 1150 | Pyruvate carboxylase; TIM barrel, ligase; HET: BTI | 82.19 | |
| 3va7_A | 1236 | KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A | 82.13 |
| >3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-91 Score=705.51 Aligned_cols=401 Identities=27% Similarity=0.404 Sum_probs=39.6
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccChhhHHHH
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESEDEIAEA 80 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~~~~~~~ 80 (418)
||+||++|+||+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+.|.+|++|+.|.+++++....
T Consensus 7 mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~~~~~~~~ 86 (428)
T 3dva_I 7 LPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLDAPGYENMTF 86 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecCCcccccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998765443211
Q ss_pred HhhhhcCCCCCCCCCCCCcccccccCCCCCCCCcccccCccccccCCccCCCCCCCCccccChhHHHHHHHcCCCccccc
Q 014822 81 QAKAAASGSPSSPASETSNSAAVVAAVPHPQPEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVV 160 (418)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~ar~la~e~gidl~~v~ 160 (418)
.... ... ++....+..+ .. ..+.+.+.+..... ..+. ....++++||+||+||+|+||||++|+
T Consensus 87 ~~~~-~~~---~~~~~~~~~~-~~-~~~~~~~~~~~~~~---------~~~~-~~~~~~~asP~~R~lA~e~gvdl~~v~ 150 (428)
T 3dva_I 87 KGQE-QEE---AKKEEKTETV-SK-EEKVDAVAPNAPAA---------EAEA-GPNRRVIAMPSVRKYAREKGVDIRLVQ 150 (428)
T ss_dssp ---------------------------------------------------------CCCCCHHHHHHHHHTTCCGGGSC
T ss_pred cccc-ccc---cccCCCcccC-Cc-cccccCCCcccccc---------cccc-ccccccccCHHHHHHHHHcCCCHHHCC
Confidence 1000 000 0000000000 00 00000000000000 0000 112367899999999999999999999
Q ss_pred cCCCCCccchhhHHHHHHhcCCC---ccc--cc-CCCC-----CCCCceeccCCchhHHHHHHhhhc-CCcceEEEEEEE
Q 014822 161 GSGPKGRIVAKDVEAEAAAAGPA---ASV--AA-AGPA-----GIELASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTI 228 (418)
Q Consensus 161 gtG~~Gri~~~DV~~~~~~~~~~---~~~--~~-~~~~-----~~~~~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~v 228 (418)
|||++|||+++||++|+...... +.+ .. .+.. .....+.+|+++|||.|+++|.+| +++||||++.+|
T Consensus 151 gtG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~Rk~ia~~m~~S~~~~P~~~~~~ev 230 (428)
T 3dva_I 151 GTGKNGRVLKEDIDAFLAGGAKPAPAAAEEKAAPAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEA 230 (428)
T ss_dssp CCSTTSCCCTTTTTTTSCC-------------------------------------------------------------
T ss_pred CCCCCCceeHHHHHHHhhccccccccccccccccCCCCccccccCCccccccCcHHHHHHHHHHHHhcccCCeEEEEEEE
Confidence 99999999999999997532111 000 00 0000 011256899999999999999999 799999999999
Q ss_pred EchHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhhCCcCcccccCC-CeEEEcCceeEEEEEEeCCCeEEeEEeCC
Q 014822 229 TTDALDALYKKIKS------KGVTMTALLAKATALALVQHPVVNSSCRDG-NSFIYNSSINIAVAVAVDGGLITPVLQDA 301 (418)
Q Consensus 229 Dvt~l~~~~~~~k~------~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~-~~i~~~~~i~i~~av~~~~gl~~pvi~~~ 301 (418)
|+|+|+++|+++|+ .++||++||+||+++||++||+||++|+++ +++++|+++|+|+||++++||++|+|+++
T Consensus 231 Dvt~l~~~rk~~~~~~~~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a 310 (428)
T 3dva_I 231 DVTKLVAHRKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHA 310 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eHHHHHHHHHHhhhhHhhcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCceEEeeeccC
Confidence 99999999999874 269999999999999999999999999642 69999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCeEecCCCCCceEEEeccceeEEEEccCCeEEEEe
Q 014822 302 DKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASEPTVVATKDGRIGMKN 381 (418)
Q Consensus 302 ~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~~pii~~p~~~il~iG~~~~~~v~~~~g~i~~r~ 381 (418)
++++|.+|+++++++.+++|+|+|.++|+++|||+|||+||+|+++|+||+|+||++||++|+++++|++. +|++++|+
T Consensus 311 ~~~sl~eia~~~~~l~~~ar~gkL~~~e~~ggtftISnlG~~G~~~ftpIin~pq~aIl~vG~i~~~pv~~-~g~i~~r~ 389 (428)
T 3dva_I 311 DRKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVR-DGEIVAAP 389 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCccceEeecCCCCceEEEccccEEEEEEE-CCEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995 89999999
Q ss_pred EEEEEEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 382 QMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 382 ~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
+|||||+||||+|||+|+++||+.|+++||+|+.|||
T Consensus 390 ~m~lsls~DHRviDG~~aa~Fl~~lk~~Le~P~~lll 426 (428)
T 3dva_I 390 MLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM 426 (428)
T ss_dssp -------------------------------------
T ss_pred eEEEEEEecccccchHHHHHHHHHHHHHHhCHHHHhh
Confidence 9999999999999999999999999999999998875
|
| >3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0 | Back alignment and structure |
|---|
| >1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A | Back alignment and structure |
|---|
| >1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A | Back alignment and structure |
|---|
| >2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A* | Back alignment and structure |
|---|
| >3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
| >3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
| >1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A* | Back alignment and structure |
|---|
| >3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* | Back alignment and structure |
|---|
| >2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A | Back alignment and structure |
|---|
| >3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C* | Back alignment and structure |
|---|
| >2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A | Back alignment and structure |
|---|
| >1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A | Back alignment and structure |
|---|
| >2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum} | Back alignment and structure |
|---|
| >1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1 | Back alignment and structure |
|---|
| >1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1 | Back alignment and structure |
|---|
| >1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A | Back alignment and structure |
|---|
| >1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1 | Back alignment and structure |
|---|
| >1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A* | Back alignment and structure |
|---|
| >2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli} | Back alignment and structure |
|---|
| >2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A | Back alignment and structure |
|---|
| >1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A | Back alignment and structure |
|---|
| >2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A | Back alignment and structure |
|---|
| >2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A | Back alignment and structure |
|---|
| >2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
| >1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C* | Back alignment and structure |
|---|
| >1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A | Back alignment and structure |
|---|
| >3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} | Back alignment and structure |
|---|
| >1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A | Back alignment and structure |
|---|
| >2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K | Back alignment and structure |
|---|
| >3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A* | Back alignment and structure |
|---|
| >2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A* | Back alignment and structure |
|---|
| >1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A | Back alignment and structure |
|---|
| >3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A | Back alignment and structure |
|---|
| >2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* | Back alignment and structure |
|---|
| >1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A* | Back alignment and structure |
|---|
| >1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1 | Back alignment and structure |
|---|
| >3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E* | Back alignment and structure |
|---|
| >3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B | Back alignment and structure |
|---|
| >2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli} | Back alignment and structure |
|---|
| >3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans} | Back alignment and structure |
|---|
| >3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli} | Back alignment and structure |
|---|
| >3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A | Back alignment and structure |
|---|
| >3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae} | Back alignment and structure |
|---|
| >3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum} | Back alignment and structure |
|---|
| >1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A | Back alignment and structure |
|---|
| >3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A | Back alignment and structure |
|---|
| >4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A | Back alignment and structure |
|---|
| >3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP} | Back alignment and structure |
|---|
| >2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2} | Back alignment and structure |
|---|
| >3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A* | Back alignment and structure |
|---|
| >1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A* | Back alignment and structure |
|---|
| >2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A | Back alignment and structure |
|---|
| >1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A | Back alignment and structure |
|---|
| >1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A | Back alignment and structure |
|---|
| >2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A* | Back alignment and structure |
|---|
| >2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1 | Back alignment and structure |
|---|
| >2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A | Back alignment and structure |
|---|
| >2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti} | Back alignment and structure |
|---|
| >2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli} | Back alignment and structure |
|---|
| >2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima} | Back alignment and structure |
|---|
| >2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A | Back alignment and structure |
|---|
| >3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli} | Back alignment and structure |
|---|
| >3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans} | Back alignment and structure |
|---|
| >2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum} | Back alignment and structure |
|---|
| >3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1 | Back alignment and structure |
|---|
| >1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1 | Back alignment and structure |
|---|
| >2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima} | Back alignment and structure |
|---|
| >4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} | Back alignment and structure |
|---|
| >2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli} | Back alignment and structure |
|---|
| >1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A | Back alignment and structure |
|---|
| >1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A | Back alignment and structure |
|---|
| >3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C* | Back alignment and structure |
|---|
| >2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B | Back alignment and structure |
|---|
| >1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A | Back alignment and structure |
|---|
| >1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A | Back alignment and structure |
|---|
| >4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A | Back alignment and structure |
|---|
| >2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A | Back alignment and structure |
|---|
| >2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1 | Back alignment and structure |
|---|
| >3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* | Back alignment and structure |
|---|
| >3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1 | Back alignment and structure |
|---|
| >3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
| >3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A | Back alignment and structure |
|---|
| >3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A* | Back alignment and structure |
|---|
| >3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 418 | ||||
| d1scza_ | 233 | c.43.1.1 (A:) Dihydrolipoamide succinyltransferase | 3e-51 | |
| d1q23a_ | 214 | c.43.1.1 (A:) Chloramphenicol acetyltransferase, C | 5e-46 | |
| d3claa_ | 213 | c.43.1.1 (A:) Chloramphenicol acetyltransferase, C | 3e-44 | |
| d1b5sa_ | 242 | c.43.1.1 (A:) Dihydrolipoamide acetyltransferase { | 5e-38 | |
| d1dpba_ | 243 | c.43.1.1 (A:) Dihydrolipoamide acetyltransferase { | 2e-33 | |
| d1y8ob1 | 102 | b.84.1.1 (B:128-229) Lipoyl domain of dihydrolipoa | 2e-19 | |
| d1pmra_ | 80 | b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate | 3e-18 | |
| d1k8ma_ | 87 | b.84.1.1 (A:) Lipoyl domain of the mitochondrial b | 1e-16 | |
| d1ghja_ | 79 | b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate | 2e-16 | |
| d1laba_ | 80 | b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide ac | 1e-15 | |
| d1w85i_ | 42 | a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl | 4e-11 | |
| d1iyua_ | 79 | b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide ac | 6e-11 | |
| d1gjxa_ | 81 | b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide ac | 1e-10 | |
| d1qjoa_ | 80 | b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide ac | 2e-09 | |
| d2cyua1 | 39 | a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoa | 6e-09 | |
| d1dcza_ | 77 | b.84.1.1 (A:) Biotin carboxyl carrier domain of tr | 5e-07 |
| >d1scza_ c.43.1.1 (A:) Dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]} Length = 233 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: CAT-like domain: Dihydrolipoamide succinyltransferase species: Escherichia coli [TaxId: 562]
Score = 170 bits (431), Expect = 3e-51
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Query: 200 VPFTTMQGAVSRNMVESLA-VPTFRVGYTITTDALDALYKKIKSK-------GVTMTALL 251
VP T ++ V+ ++E+ + + L K+ + +
Sbjct: 7 VPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFY 66
Query: 252 AKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSR 311
KA AL ++P VN+S DG+ +Y++ ++++AV+ GL+TPVL+D D + + +
Sbjct: 67 VKAVVEALKRYPEVNASI-DGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEK 125
Query: 312 KWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASEPTVVA 371
K KEL K R L + G FT++N G+FG I+ P AI+ + A +
Sbjct: 126 KIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIK-DRPM 184
Query: 372 TKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDL 416
+G++ + M + ++ DHR+I G + FL T+ +++EDP L
Sbjct: 185 AVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRL 229
|
| >d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Length = 214 | Back information, alignment and structure |
|---|
| >d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Length = 213 | Back information, alignment and structure |
|---|
| >d1b5sa_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
| >d1dpba_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]} Length = 243 | Back information, alignment and structure |
|---|
| >d1y8ob1 b.84.1.1 (B:128-229) Lipoyl domain of dihydrolipoamide acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 102 | Back information, alignment and structure |
|---|
| >d1pmra_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Escherichia coli [TaxId: 562]} Length = 80 | Back information, alignment and structure |
|---|
| >d1k8ma_ b.84.1.1 (A:) Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
| >d1ghja_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Azotobacter vinelandii [TaxId: 354]} Length = 79 | Back information, alignment and structure |
|---|
| >d1laba_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Length = 80 | Back information, alignment and structure |
|---|
| >d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Length = 42 | Back information, alignment and structure |
|---|
| >d1iyua_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]} Length = 79 | Back information, alignment and structure |
|---|
| >d1gjxa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Neisseria meningitidis [TaxId: 487]} Length = 81 | Back information, alignment and structure |
|---|
| >d1qjoa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Escherichia coli [TaxId: 562]} Length = 80 | Back information, alignment and structure |
|---|
| >d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]} Length = 39 | Back information, alignment and structure |
|---|
| >d1dcza_ b.84.1.1 (A:) Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} Length = 77 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 418 | |||
| d1scza_ | 233 | Dihydrolipoamide succinyltransferase {Escherichia | 100.0 | |
| d1b5sa_ | 242 | Dihydrolipoamide acetyltransferase {Bacillus stear | 100.0 | |
| d1dpba_ | 243 | Dihydrolipoamide acetyltransferase {Azotobacter vi | 100.0 | |
| d1q23a_ | 214 | Chloramphenicol acetyltransferase, CAT {Escherichi | 100.0 | |
| d3claa_ | 213 | Chloramphenicol acetyltransferase, CAT {Escherichi | 100.0 | |
| d1y8ob1 | 102 | Lipoyl domain of dihydrolipoamide acetyltransferas | 99.87 | |
| d1ghja_ | 79 | Lipoyl domain of the 2-oxoglutarate dehydrogenase | 99.86 | |
| d1laba_ | 80 | Lipoyl domain of dihydrolipoamide acetyltransferas | 99.85 | |
| d1k8ma_ | 87 | Lipoyl domain of the mitochondrial branched-chain | 99.84 | |
| d1pmra_ | 80 | Lipoyl domain of the 2-oxoglutarate dehydrogenase | 99.81 | |
| d1gjxa_ | 81 | Lipoyl domain of dihydrolipoamide acetyltransferas | 99.78 | |
| d1qjoa_ | 80 | Lipoyl domain of dihydrolipoamide acetyltransferas | 99.77 | |
| d1iyua_ | 79 | Lipoyl domain of dihydrolipoamide acetyltransferas | 99.76 | |
| d1dcza_ | 77 | Biotin carboxyl carrier domain of transcarboxylase | 99.63 | |
| d1w85i_ | 42 | E3/E1 binding domain of dihydrolipoyl acetyltransf | 99.56 | |
| d2cyua1 | 39 | E3-binding domain of dihydrolipoamide succinyltran | 99.5 | |
| d1bdoa_ | 80 | Biotinyl domain of acetyl-CoA carboxylase {Escheri | 99.47 | |
| d1onla_ | 127 | Protein H of glycine cleavage system {Thermus ther | 97.32 | |
| d1hpca_ | 131 | Protein H of glycine cleavage system {Pea (Pisum s | 97.27 | |
| d1vf7a_ | 237 | Multidrug resistance protein MexA domain {Pseudomo | 96.8 | |
| d1dcza_ | 77 | Biotin carboxyl carrier domain of transcarboxylase | 96.61 | |
| d1bdoa_ | 80 | Biotinyl domain of acetyl-CoA carboxylase {Escheri | 95.43 | |
| d1k8ma_ | 87 | Lipoyl domain of the mitochondrial branched-chain | 95.3 | |
| d1iyua_ | 79 | Lipoyl domain of dihydrolipoamide acetyltransferas | 95.29 | |
| d1qjoa_ | 80 | Lipoyl domain of dihydrolipoamide acetyltransferas | 95.19 | |
| d1vf7a_ | 237 | Multidrug resistance protein MexA domain {Pseudomo | 94.79 | |
| d1ghja_ | 79 | Lipoyl domain of the 2-oxoglutarate dehydrogenase | 94.0 | |
| d1gjxa_ | 81 | Lipoyl domain of dihydrolipoamide acetyltransferas | 92.27 | |
| d1l5aa1 | 174 | VibH {Vibrio cholerae [TaxId: 666]} | 92.05 | |
| d1y8ob1 | 102 | Lipoyl domain of dihydrolipoamide acetyltransferas | 91.79 | |
| d1laba_ | 80 | Lipoyl domain of dihydrolipoamide acetyltransferas | 91.75 | |
| d1pmra_ | 80 | Lipoyl domain of the 2-oxoglutarate dehydrogenase | 90.98 | |
| d2f3ga_ | 150 | Glucose-specific factor III (glsIII) {Escherichia | 88.64 | |
| d1gpra_ | 158 | Glucose permease IIa domain, IIa-glc {Bacillus sub | 88.04 | |
| d2gpra_ | 154 | Glucose permease IIa domain, IIa-glc {Mycoplasma c | 86.18 | |
| d1brwa3 | 103 | Pyrimidine nucleoside phosphorylase {Bacillus stea | 86.11 | |
| d2gpra_ | 154 | Glucose permease IIa domain, IIa-glc {Mycoplasma c | 85.2 | |
| d1brwa3 | 103 | Pyrimidine nucleoside phosphorylase {Bacillus stea | 84.25 | |
| d1qpoa2 | 115 | Quinolinic acid phosphoribosyltransferase (Nicotin | 83.94 | |
| d1gpra_ | 158 | Glucose permease IIa domain, IIa-glc {Bacillus sub | 82.88 | |
| d1uoua3 | 105 | Thymidine phosphorylase {Human (Homo sapiens) [Tax | 82.58 | |
| d1uoua3 | 105 | Thymidine phosphorylase {Human (Homo sapiens) [Tax | 82.26 | |
| d2tpta3 | 105 | Thymidine phosphorylase {Escherichia coli [TaxId: | 81.68 | |
| d1qapa2 | 122 | Quinolinic acid phosphoribosyltransferase (Nicotin | 80.48 |
| >d1scza_ c.43.1.1 (A:) Dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: CAT-like domain: Dihydrolipoamide succinyltransferase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.2e-58 Score=426.00 Aligned_cols=220 Identities=28% Similarity=0.451 Sum_probs=211.7
Q ss_pred ceeccCCchhHHHHHHhhhc-CCcceEEEEEEEEchHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHhhCCcCccc
Q 014822 197 ASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALDALYKKIKS-------KGVTMTALLAKATALALVQHPVVNSS 268 (418)
Q Consensus 197 ~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~vDvt~l~~~~~~~k~-------~~~s~~~~~~~Av~~Al~~~P~ln~~ 268 (418)
.+.+|++++||.|+++|.+| +++||||++.++|+|+|.++|+++++ .++|+++|++||+++||.+||+||++
T Consensus 4 ee~vpls~~rk~ia~~m~~S~~~iP~~~~~~evd~t~l~~~r~~~~~~~~~~~~~klt~~~~likA~a~aL~~~P~~Na~ 83 (233)
T d1scza_ 4 EKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 83 (233)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCE
T ss_pred CcccCCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHHHHHHHHhhHhhcCCccCHHHHHHHHHHHHHHhCchhheE
Confidence 56789999999999999999 79999999999999999999988753 27999999999999999999999999
Q ss_pred ccCCCeEEEcCceeEEEEEEeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCe
Q 014822 269 CRDGNSFIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRF 348 (418)
Q Consensus 269 ~~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~ 348 (418)
|+ ++++++|+++|||+||++++||++|||++++++++.+|+++++++.+++|+|+|.++|++||||||||+|++|.++|
T Consensus 84 ~~-~~~i~~~~~vnIgiAv~~~~GL~vPvI~~a~~~sl~eia~~~~~l~~~ar~~~L~~~d~~ggTfTISNlG~~g~~~~ 162 (233)
T d1scza_ 84 ID-GDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS 162 (233)
T ss_dssp EE-TTEEECCSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCSEEEEEGGGGTCCCC
T ss_pred Ec-CCeEEEeccceEEEEEEcCCCeEEeEeeccccCCHHHHHHHHHHHHHHhhcCCCCHHHhCCCcEEEEcCccccceee
Confidence 96 57999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCceEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 349 DAILPPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 349 ~pii~~p~~~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
+||+||||++||++|+++++|++. +|++++|++|+|||+||||++||+++|+||++|+++||||+.|||
T Consensus 163 tpii~ppq~aIl~vG~i~~~pv~~-~g~i~~r~~~~lsls~DHRviDGa~aa~Fl~~l~~~lE~P~~lll 231 (233)
T d1scza_ 163 TPIINPPQSAILGMHAIKDRPMAV-NGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 231 (233)
T ss_dssp CCCCCTTCSEEEEEEEEEEEEEEE-TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred eeecCCCCceEEecccceeecccc-CCeEEEEEEeEEEEEhhcchhccHHHHHHHHHHHHHHhCHHHHhh
Confidence 999999999999999999999986 899999999999999999999999999999999999999998874
|
| >d1b5sa_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1dpba_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
| >d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y8ob1 b.84.1.1 (B:128-229) Lipoyl domain of dihydrolipoamide acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ghja_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
| >d1laba_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1k8ma_ b.84.1.1 (A:) Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pmra_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1gjxa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
| >d1qjoa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1iyua_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1dcza_ b.84.1.1 (A:) Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
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| >d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1bdoa_ b.84.1.1 (A:) Biotinyl domain of acetyl-CoA carboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1onla_ b.84.1.1 (A:) Protein H of glycine cleavage system {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1hpca_ b.84.1.1 (A:) Protein H of glycine cleavage system {Pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
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| >d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1dcza_ b.84.1.1 (A:) Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
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| >d1bdoa_ b.84.1.1 (A:) Biotinyl domain of acetyl-CoA carboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1k8ma_ b.84.1.1 (A:) Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1iyua_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1qjoa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1ghja_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1gjxa_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
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| >d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
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| >d1y8ob1 b.84.1.1 (B:128-229) Lipoyl domain of dihydrolipoamide acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1laba_ b.84.1.1 (A:) Lipoyl domain of dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1pmra_ b.84.1.1 (A:) Lipoyl domain of the 2-oxoglutarate dehydrogenase complex {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2f3ga_ b.84.3.1 (A:) Glucose-specific factor III (glsIII) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d2gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Mycoplasma capricolum [TaxId: 2095]} | Back information, alignment and structure |
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| >d1brwa3 d.41.3.1 (A:331-433) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d2gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Mycoplasma capricolum [TaxId: 2095]} | Back information, alignment and structure |
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| >d1brwa3 d.41.3.1 (A:331-433) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1qpoa2 d.41.2.1 (A:2-116) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1uoua3 d.41.3.1 (A:374-480) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1uoua3 d.41.3.1 (A:374-480) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2tpta3 d.41.3.1 (A:336-440) Thymidine phosphorylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1qapa2 d.41.2.1 (A:8-129) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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