Citrus Sinensis ID: 014833

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------
Protein Sequence
MEAVTSAVEKVKGFIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSNLRWAVTISDIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEEEEEEcccccccccccccccccccccEEEEEEEEccccccEEEEEEEEcccccccccccccccEEEEEEEEEEEccccEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHcccccccccccccccccccEEEEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEEEcccccEEEEEEcccccccccccEEEEcccccccccccccEEEEEEcccccccEEEEEcEEEEEccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEEHHHHHcccccHHHHcHHHHccccccccEEEEEEEccccccEEEEEEEccccccccccccccccEEEEHEEEEHcccccEEEEEEEccccccccccccccccccccccccccccccHHHHccccEEEEEEEcccHHHHHHHHHHcccccccccccccccccEEEEEEEcccccEEEEHHHHccccccccccccccEEEEHHHcccccccccccccccccccccccccccccEEEEEEEEccccccEEEEEEEEEcccccEEEEEEEccccccccccEEEEccccccccccccEEEEEEEEEEcccccEEccEEEEEEcccccccEEEEEEcccc
Coil and Loop (DISEMBL)
MEAVTSAVEKVKGFIDSLFhrsqnsysrnpIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKlskgspfqeastHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVACqeggknvgnisgRSLSLAKLSYVANVGDWFYAIAvpvgaqcrdfdiarnyshkakglttissldppllsqhnggaigfTVRKSNVVASLAQSVSglgvqlgsdgighclSTFGQVVCQLsrgvnlslmglhqvpksrnhrvslrpltipigflkqrnasensvgasasslgmntqEIVSTGSIALKLETeldenakvggwfemqnsnsnlRWAVTISDIFnedlewgvtfsgmhdgskgwnQYQLESFLDLclgkrfslklgtsyvadgdaqIPALMLRCIWSL
Flexible Loop (DISEMBL)
MEAVTSAVEKVKGfidslfhrsqnsysrnpIEILKRLqresfseqmkqrdrldKVERLLSFYKLskgspfqeasthVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTrftfettmrqnDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHqvpksrnhrvslrPLTIPIGFLKQRNASENSVGasasslgmnTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSNLRWAVTISDIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL
Low Complexity Region (SEG)
MEAVTSAVEKVKGFIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSNLRWAVTISDIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL
Disordered region (IsUnstruct)
***********KGFIDSLF*************************************RLLSFYKLS*******ASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFL***********************IVSTGSIALKLETELDENAKVGGWFEMQNSNSNLRWAVTISDIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIW**
Disordered Region (DISOPRED)
********EKVKG********************LKRLQRESFSEQMKQRDRLDKVERLLSF***********ASTHVRAEVDVLGAVLMMGDIDQQ****LDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEG******ISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSH********SSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSV************GHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNH*VSLRPLTIPIGFLK**************SLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSNLRWAVTISDIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL
Disordered Region (DISEMBL)
********EKVKGFIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRN************LGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSNLRWAVTISDIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL
Disordered Region (DISPRO)
*****S*********DS*F****NSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQ**********************VSTGSIALKLETELDENAKVGGWFEMQNSNSNLRWAVTISDIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAVTSAVEKVKGFIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSNLRWAVTISDIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	417
317106592	417	JHL20J20.7 [Jatropha curcas]	0.988	0.988	0.575	1e-132
225457885	420	PREDICTED: uncharacterized protein LOC10	0.995	0.988	0.561	1e-126
255539020	423	conserved hypothetical protein [Ricinus	0.992	0.978	0.549	1e-126
224083115	427	predicted protein [Populus trichocarpa]	1.0	0.976	0.543	1e-122
449500363	426	PREDICTED: uncharacterized LOC101215602	0.997	0.976	0.519	1e-108
449450498	426	PREDICTED: uncharacterized protein LOC10	0.997	0.976	0.519	1e-108
15220346	424	uncharacterized protein [Arabidopsis tha	0.997	0.981	0.458	1e-101
297843962	422	hypothetical protein ARALYDRAFT_471268 [	0.988	0.976	0.451	9e-97
388503352	412	unknown [Lotus japonicus]	0.932	0.944	0.471	1e-95
357466997	408	hypothetical protein MTR_3g114130 [Medic	0.949	0.970	0.469	1e-92

>gi|317106592|dbj|BAJ53100.1| JHL20J20.7 [Jatropha curcas]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/422 (57%), Positives = 296/422 (70%), Gaps = 10/422 (2%)

Query: 1   MEAVTSAVEKV----KGFIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVE 56
           ME V + ++++    + F+D   HR   S  RNPIEILKRLQRESFS+ MK RDR DK E
Sbjct: 1   MELVVNKIKELAKSSQEFVDGFLHRCDKSARRNPIEILKRLQRESFSDLMKLRDRQDKFE 60

Query: 57  RLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTF 116
           R+LSFYK SK SPFQE+STHVR EVD LGA+L++G+ DQQH DALDRA ++TGI +RFTF
Sbjct: 61  RMLSFYKTSKASPFQESSTHVRGEVDALGAILLLGNDDQQHYDALDRAGIKTGIRSRFTF 120

Query: 117 ETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRD 176
           ETT+R  D L+A+ VA    G  V   SG +LSLAK+SYVANV DWF AIA+P+GAQ RD
Sbjct: 121 ETTIRVKDMLLAELVASTRDGDEV---SGSALSLAKVSYVANVSDWFSAIAIPIGAQSRD 177

Query: 177 FDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSD 236
            +I +N S + KGLT +SS  PPLL QHNG  IG TVRKSNV+AS+AQSVSGLG+Q  SD
Sbjct: 178 IEITKNSSDQRKGLTDLSSFGPPLLYQHNGSTIGLTVRKSNVIASMAQSVSGLGLQPFSD 237

Query: 237 GIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSV 296
           GI  C STFGQ+  Q  RG+  SL+GLHQVPKS +H   L  L IP+   K R A E   
Sbjct: 238 GISQCFSTFGQIAFQFPRGIKFSLLGLHQVPKSSSHHTKLGSLIIPLA--KHRRAPEAPF 295

Query: 297 GASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSN-LRWAVTISDIFNE 355
            ASA  +  +  ++VSTGSIA+KLETELDEN K+GGW EM+NSN   L+WAV + D    
Sbjct: 296 EASAPLMETDILQMVSTGSIAMKLETELDENTKIGGWIEMKNSNPKQLQWAVNMFDDSEN 355

Query: 356 DLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIW 415
           +  WG+  SG+ +GS      Q ES+L L  G +FSLK G +Y  DGDA+I ALMLR  W
Sbjct: 356 ESGWGMCVSGITEGSGNRAHLQAESYLKLNFGTKFSLKPGITYAVDGDARIFALMLRSNW 415

Query: 416 SL 417
           S 
Sbjct: 416 SF 417

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457885|ref|XP_002279280.1| PREDICTED: uncharacterized protein LOC100260855 [Vitis vinifera] gi|302142713|emb|CBI19916.3| unnamed protein product [Vitis vinifera]

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/422 (56%), Positives = 299/422 (70%), Gaps = 7/422 (1%)

Query: 1   MEAVTSAVEKVKGFIDSLFHRSQNSY----SRNPIEILKRLQRESFSEQMKQRDRLDKVE 56
           ME +TS V+K+KGF  S  H   N       RNPIEILKRLQRE+FS+ MK RDR DKVE
Sbjct: 1   MEPITSVVDKLKGFAKS-SHEFVNGLVPRRDRNPIEILKRLQREAFSDLMKLRDRQDKVE 59

Query: 57  RLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTF 116
           R+LS YK S GSPF+EA+THV  EVDVLGA+LM  ++DQQ  DA +RA +RTGI +RFTF
Sbjct: 60  RILS-YKSSTGSPFKEANTHVMGEVDVLGALLMKDNVDQQDYDAFNRAGMRTGIDSRFTF 118

Query: 117 ETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRD 176
           +TT+RQ+DTLVA+F A Q+G   +G+  G  LSLAK+ YVANV DWF A+AVPVGAQCRD
Sbjct: 119 KTTIRQSDTLVAEFAASQKGQGYLGHDFGSPLSLAKVLYVANVSDWFSAVAVPVGAQCRD 178

Query: 177 FDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSD 236
              A + +H+ KGLT  SS  PP+L+QHNG AIG  VRKS +VASLAQ  SGLGV+  +D
Sbjct: 179 VGFATDSAHQGKGLTDFSSFGPPILNQHNGSAIGLMVRKSKLVASLAQFASGLGVEPCTD 238

Query: 237 GIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSV 296
           GI  C STFGQVVCQLS G  LSLMGLHQVP+  + +  L  LT+P+  LK R A + SV
Sbjct: 239 GIRDCFSTFGQVVCQLSEGTKLSLMGLHQVPRPLSQQFRLGALTMPVSILKLRKAPKTSV 298

Query: 297 GASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNS-NLRWAVTISDIFNE 355
            AS   LG + +E VS GS A+ LE++LD++ ++GGW EM+NS   +L+WA+++SD    
Sbjct: 299 EASDRLLGTDMEERVSAGSFAVMLESKLDDSTRIGGWIEMKNSGPQHLQWALSVSDSPEN 358

Query: 356 DLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIW 415
           +  W ++  G+      W+ +Q E+ L   LGKRFSL+ G  YV DG+AQIP +MLR  W
Sbjct: 359 EFGWSLSLGGIIKRPTSWDHFQAEASLKFNLGKRFSLQPGLIYVMDGNAQIPVVMLRSSW 418

Query: 416 SL 417
           SL
Sbjct: 419 SL 420

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539020|ref|XP_002510575.1| conserved hypothetical protein [Ricinus communis] gi|223551276|gb|EEF52762.1| conserved hypothetical protein [Ricinus communis]

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/426 (54%), Positives = 303/426 (71%), Gaps = 12/426 (2%)

Query: 1   MEAVTSAVEKVKG-------FIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLD 53
           ME V   V+K+KG       F+D L HR ++  SRNPIEILKRLQRE+FS+ MK RDR D
Sbjct: 1   MEPVGFVVDKIKGLTKSGQEFVDGLLHRRRSPTSRNPIEILKRLQREAFSDIMKLRDRQD 60

Query: 54  KVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTR 113
           KVER+LSF K SKGSPF+EAST VR EVD LGA+L++GD+DQ+H DAL RA ++TG+ +R
Sbjct: 61  KVERILSFSKASKGSPFKEASTRVRGEVDALGAILLLGDVDQKHYDALGRAGIKTGVDSR 120

Query: 114 FTFETTMRQNDTLVADFVACQEGGKNVG-NISGRSLSLAKLSYVANVGDWFYAIAVPVGA 172
           FTFETT+R+ DTL+A+FVA Q   +  G + SG  LSLAK+ Y+AN+ DWF   A+PVGA
Sbjct: 121 FTFETTIREKDTLLAEFVANQNSTRYGGDDASGSGLSLAKVLYMANICDWFSLTAIPVGA 180

Query: 173 QCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQ 232
           QCRDF I+ + S++ KGLT +SS  PPLL+QH+G  IG +VRKSNV+AS+AQS+SGLGV 
Sbjct: 181 QCRDFGISTSSSNQRKGLTDLSSTGPPLLNQHSGSTIGLSVRKSNVIASMAQSISGLGVH 240

Query: 233 LGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNAS 292
               GI    STFGQ+VCQL RGV LSL+GLHQVPKS  H ++   LTIP+  +K   A 
Sbjct: 241 C---GICQYFSTFGQIVCQLPRGVKLSLLGLHQVPKSSGHNINFGSLTIPLVLMKGHKAP 297

Query: 293 ENSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSN-SNLRWAVTISD 351
                ++A  +  ++ +I STG IALKLE+ELDE+ K+GGW EM+NS+   ++WAV + D
Sbjct: 298 TIMSESAAPLMETDSLQIPSTGFIALKLESELDEDTKIGGWIEMKNSSVKQMQWAVNMFD 357

Query: 352 IFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALML 411
              ++  WGV+ SGM  G   W   Q ES+L + LGK+ SLK G +Y  +G+A+I  LML
Sbjct: 358 DSEDESGWGVSVSGMVVGGNNWTHLQAESYLKINLGKKLSLKPGIAYAVEGNARIFGLML 417

Query: 412 RCIWSL 417
           R  WS 
Sbjct: 418 RSNWSF 423

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083115|ref|XP_002306949.1| predicted protein [Populus trichocarpa] gi|222856398|gb|EEE93945.1| predicted protein [Populus trichocarpa]

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/427 (54%), Positives = 301/427 (70%), Gaps = 10/427 (2%)

Query: 1   MEAVTSAVEKVKG-------FIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLD 53
           ME V S V+K+KG       F+D L  R +NS  RNPIEILKRLQRE+FS+ MK RDR D
Sbjct: 1   MEPVASVVDKIKGVAKSGQDFVDGLLRRRENSSRRNPIEILKRLQREAFSDLMKLRDRQD 60

Query: 54  KVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTR 113
           KVER+LSFYK  KGSPFQE ST VR EVD  GA+LM+GDIDQ+H DA+ RA ++TGI +R
Sbjct: 61  KVERVLSFYKTFKGSPFQENSTLVRGEVDASGAILMVGDIDQEHGDAVGRAGIKTGISSR 120

Query: 114 FTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQ 173
            +FET +R  D+L+A+FVA Q+G   +G +S  +L+LAK+SY ANV DWF AI +PVGAQ
Sbjct: 121 LSFETIVRHKDSLLAEFVASQKGIVEIGGVSEGALTLAKVSYTANVSDWFSAIVIPVGAQ 180

Query: 174 CRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQL 233
            RD D+  N S++  G+T +SS+ PPLL+QHN  AIG TVRKSNV+A +AQS+SGL  Q 
Sbjct: 181 FRDLDMTANSSNQRHGVTDLSSVGPPLLNQHNDAAIGLTVRKSNVIAMMAQSISGLRRQP 240

Query: 234 GSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASE 293
             DGIGH   TFGQ++CQL +G+  SLMGL QV KS +H  +L  L IP+GFLK   + E
Sbjct: 241 LFDGIGHDFGTFGQIICQLPKGIKFSLMGLQQVAKSSSHHSNLGALAIPVGFLKHHESPE 300

Query: 294 NSVGASASSLGMNTQEIVS--TGSIALKLETELDENAKVGGWFEMQNSNS-NLRWAVTIS 350
            S   SA  +G ++QEI++  TG IALKLE+ELDE+ ++GGW EM+NSN  +L+WA+   
Sbjct: 301 ISFQDSALPVGASSQEIITSRTGYIALKLESELDESTRIGGWIEMKNSNPKHLQWALNAF 360

Query: 351 DIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALM 410
           D   ++  WG+  SG+        + Q ES++ L +GK+F LK G +Y  DG+A+I ALM
Sbjct: 361 DDAEDEFGWGLCLSGVFVDPTNHGRLQAESYVKLNIGKKFCLKPGITYSRDGNAKILALM 420

Query: 411 LRCIWSL 417
           LR  WS 
Sbjct: 421 LRSNWSF 427

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449500363|ref|XP_004161076.1| PREDICTED: uncharacterized LOC101215602 [Cucumis sativus]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/427 (51%), Positives = 290/427 (67%), Gaps = 11/427 (2%)

Query: 1   MEAVTSAVEKVKGF-------IDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLD 53
           ME VTS V+K+KGF        D L HR + S  R+PIEILKRLQRE+FS+ M+ RDR D
Sbjct: 1   MEPVTSVVDKLKGFGTATQNFFDGLVHRREKSARRSPIEILKRLQREAFSDLMRLRDRQD 60

Query: 54  KVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTR 113
           KVE++LS Y   + SPFQE  THV+ EV+VLGA+L M  ID     AL RA + TGIH+R
Sbjct: 61  KVEKVLSLYNTQRSSPFQENVTHVKGEVNVLGALLFMSVIDNHSFKALHRAGISTGIHSR 120

Query: 114 FTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQ 173
            TFETT+R++D+LVA+FVA Q+   + G  SG  L+L+K+ Y A+VGDW  A  VPVGA+
Sbjct: 121 LTFETTVRESDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASVGDWMSATVVPVGAR 180

Query: 174 CRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQL 233
           CRD  I  N SH+ KGLT  SS  PPLL Q NGGAIG TVRKSN+ ASLAQ +S   +Q 
Sbjct: 181 CRDVSIIANPSHQEKGLTDASSFGPPLLDQPNGGAIGLTVRKSNLTASLAQFISTERIQP 240

Query: 234 GSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPK-SRNHRVSLRPLTIPIGFLKQRNAS 292
             D I H L TFGQ+VCQL RG+ LSL+GL QVPK S N  V+L  LTIP+  L +R + 
Sbjct: 241 SFDRIQHHLGTFGQLVCQLPRGMKLSLLGLLQVPKLSSNQHVNLGALTIPV-CLSRRKSP 299

Query: 293 ENSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSN-LRWAVTISD 351
           E   G     L ++ +E +S  S+AL LE+ELDE  ++ GW E+  SNS  LRWAV++SD
Sbjct: 300 ETVDGPDPRLLTVSGEEAISRRSVALLLESELDEETRIAGWVELSQSNSKYLRWAVSVSD 359

Query: 352 IFNED-LEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALM 410
             +ED L WG++ SG+   +   + +Q+ES++ L + K+F+LK G +YV DG+A++ A +
Sbjct: 360 NNSEDALGWGMSLSGILGSAIDRDHFQVESYVKLNVSKKFNLKPGIAYVTDGNAKMMAFL 419

Query: 411 LRCIWSL 417
           +R  WSL
Sbjct: 420 VRSKWSL 426

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450498|ref|XP_004142999.1| PREDICTED: uncharacterized protein LOC101215602 [Cucumis sativus]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/427 (51%), Positives = 289/427 (67%), Gaps = 11/427 (2%)

Query: 1   MEAVTSAVEKVKGF-------IDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLD 53
           ME VT  V+K+KGF        D L HR + S  R+PIEILKRLQRE+FS+ M+ RDR D
Sbjct: 1   MEPVTFVVDKLKGFGTATQNFFDGLVHRREKSARRSPIEILKRLQREAFSDLMRLRDRQD 60

Query: 54  KVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTR 113
           KVE++LS Y   + SPFQE  THV+ EV+VLGA+L M  ID     AL RA + TGIH+R
Sbjct: 61  KVEKVLSLYNTQRSSPFQENVTHVKGEVNVLGALLFMSVIDNHSFKALHRAGISTGIHSR 120

Query: 114 FTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQ 173
            TFETT+R++D+LVA+FVA Q+   + G  SG  L+L+K+ Y A+VGDW  A  VPVGA+
Sbjct: 121 LTFETTVRESDSLVAEFVANQKAKVDFGVDSGSELTLSKVLYKASVGDWMSATVVPVGAR 180

Query: 174 CRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQL 233
           CRD  I  N SH+ KGLT  SS  PPLL Q NGGAIG TVRKSN+ ASLAQ +S   +Q 
Sbjct: 181 CRDVSIIANPSHQEKGLTDASSFGPPLLDQPNGGAIGLTVRKSNLTASLAQFISTERIQP 240

Query: 234 GSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPK-SRNHRVSLRPLTIPIGFLKQRNAS 292
             D I H L TFGQ+VCQL RG+ LSL+GL QVPK S N  V+L  LTIP+  L +R + 
Sbjct: 241 SFDRIQHHLGTFGQLVCQLPRGMKLSLLGLLQVPKLSSNQHVNLGALTIPV-CLSRRKSP 299

Query: 293 ENSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSN-LRWAVTISD 351
           E   G     L ++ +E +S  SIAL LE+ELDE  ++ GW E+  SNS  LRWAV++SD
Sbjct: 300 ETVDGPDPRLLTVSGEEAISRRSIALLLESELDEETRIAGWVELSQSNSKYLRWAVSVSD 359

Query: 352 IFNED-LEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALM 410
             +ED L WG++ SG+   +   + +Q+ES++ L + K+F+LK G +YV DG+A++ A +
Sbjct: 360 NNSEDALGWGMSLSGILGSAIDRDHFQVESYVKLNVSKKFNLKPGIAYVTDGNAKMMAFL 419

Query: 411 LRCIWSL 417
           +R  WSL
Sbjct: 420 VRSKWSL 426

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220346|ref|NP_172599.1| uncharacterized protein [Arabidopsis thaliana] gi|5734725|gb|AAD49990.1|AC007259_3 Hypothetical protein [Arabidopsis thaliana] gi|28973661|gb|AAO64150.1| unknown protein [Arabidopsis thaliana] gi|29824235|gb|AAP04078.1| unknown protein [Arabidopsis thaliana] gi|110737193|dbj|BAF00545.1| hypothetical protein [Arabidopsis thaliana] gi|332190596|gb|AEE28717.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/425 (45%), Positives = 275/425 (64%), Gaps = 9/425 (2%)

Query: 1   MEAVTSAVEKVKGFIDS-------LFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLD 53
           M+ + S +EKVK F  S        F   +N    NPI+ILKRLQRE+FS+ MK R+R +
Sbjct: 1   MDPIASVLEKVKSFTKSSQDLVSRHFGFHENPSRLNPIDILKRLQRETFSDLMKLRERQE 60

Query: 54  KVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTR 113
           KVER++S  KLSKG PFQE STHVR EVDVLGA+L+MG+ D++  + L++  VR G+ +R
Sbjct: 61  KVERIISSQKLSKGGPFQETSTHVRGEVDVLGAILLMGNTDEESFNGLNKEGVRPGLLSR 120

Query: 114 FTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQ 173
           F FET++R+ D LVA+ VA   G  +  +  G  LSLAK+ Y A++ DWF AIA+PVGA 
Sbjct: 121 FVFETSLRETDRLVAELVAGYNGAGSHRDFLGGELSLAKVFYKADINDWFSAIAIPVGAH 180

Query: 174 CRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQL 233
            RD + +   S++   LT +S L PPLLSQHNG AIG T RKSN+ ASLAQS+S + V+ 
Sbjct: 181 FRDIEASTVSSYQGMSLTEVSELGPPLLSQHNGSAIGLTFRKSNITASLAQSMSNVEVEQ 240

Query: 234 GSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASE 293
           G      C  TFGQV C + R + LSL+G HQV  S ++  S+  +T+P+ FL++  A+E
Sbjct: 241 GLTAPNRCFRTFGQVTCHILRSLKLSLLGCHQVLTSSSNLHSVGAITVPVSFLRRHTATE 300

Query: 294 NSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNS-NSNLRWAVTISDI 352
               A    +  N    VS+ SIALKL++ +DE+ K+GGW E+QNS    ++W+V+I+D 
Sbjct: 301 PEPSAPPLEMSRNMNH-VSSSSIALKLDSLMDESTKLGGWIEIQNSREKQVKWSVSITDN 359

Query: 353 FNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLR 412
             +++ WG++  G+ DGS+  +Q+Q+ES+L   +G RF L     Y  + D +   LML+
Sbjct: 360 PEDEVGWGMSVGGVVDGSRNHDQFQVESYLKFNIGDRFRLSPCLVYHTNSDGRTIGLMLK 419

Query: 413 CIWSL 417
             WSL
Sbjct: 420 SHWSL 424

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843962|ref|XP_002889862.1| hypothetical protein ARALYDRAFT_471268 [Arabidopsis lyrata subsp. lyrata] gi|297335704|gb|EFH66121.1| hypothetical protein ARALYDRAFT_471268 [Arabidopsis lyrata subsp. lyrata]

 Score =  360 bits (923), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 193/427 (45%), Positives = 279/427 (65%), Gaps = 15/427 (3%)

Query: 1   MEAVTSAVEKVKGFIDS-------LFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLD 53
           M+ + S +EKVK F  S        F   +N   +NPI+ILKRLQRE+FS+ MK RDR +
Sbjct: 1   MDPIASVLEKVKSFTKSSQDLVSRHFGFHENPSRQNPIDILKRLQREAFSDLMKLRDRQE 60

Query: 54  KVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTR 113
           KVER++S  KLSK  PFQE STHVR EVDVLGA+L+MG+ D +  + L +  VR G+ +R
Sbjct: 61  KVERIISSQKLSKSGPFQETSTHVRGEVDVLGAILLMGNTDDESFNGLHKEGVRPGLLSR 120

Query: 114 FTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQ 173
           F FET++R+ D LVA+ VA  +G  N  + SGR LSLAK+ Y A++ DWF A+A+PVGA 
Sbjct: 121 FVFETSLRETDRLVAELVAGYKGEGNHCDFSGRELSLAKVFYEADINDWFSAVAIPVGAH 180

Query: 174 CRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQL 233
            RD + +   S++   LT +S L PPLL+QHNG AIG  VRKSN+ ASLAQS+S + V+ 
Sbjct: 181 FRDIEASTVSSYQGMSLTEVSELGPPLLNQHNGSAIGLIVRKSNITASLAQSMSNVEVEQ 240

Query: 234 GSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQV--PKSRNHRVSLRPLTIPIGFLKQRNA 291
           G+   G    TFGQV C + R + +SL+G HQV  P S  H V    +T+P+ FL++  A
Sbjct: 241 GAPNRG--FRTFGQVTCHILRSLKISLLGCHQVLTPSSNLHSVG--AITLPVSFLRRHTA 296

Query: 292 SENSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNS-NSNLRWAVTIS 350
           +E    A    +  +   ++S+ +IALKL++ +DE+ K+GGW E+QNS    ++W+V+I+
Sbjct: 297 TEPEPPAPPLEMSRSMNHVLSS-AIALKLDSLMDESTKLGGWIEIQNSREKQVKWSVSIT 355

Query: 351 DIFNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALM 410
           D   +++ WG++  G+ D S+  +++Q+ES+L   +G RFSL+ G  Y  + + +   LM
Sbjct: 356 DNPEDEVGWGMSVGGVVDSSRNHDRFQVESYLKFNIGDRFSLRPGLVYHTNSNGRTIGLM 415

Query: 411 LRCIWSL 417
           L+  WSL
Sbjct: 416 LQSHWSL 422

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503352|gb|AFK39742.1| unknown [Lotus japonicus]

 Score =  356 bits (913), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 192/407 (47%), Positives = 258/407 (63%), Gaps = 18/407 (4%)

Query: 14  FIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEA 73
           F D +F R      RNPIEILKRLQRESFS+ MK RDR +KVE++LSFYK S   PF EA
Sbjct: 21  FFDGVFRR------RNPIEILKRLQRESFSDLMKLRDRQEKVEKILSFYKSSNEGPFHEA 74

Query: 74  STHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVAC 133
           +T VR +VD+LGA+L M +++QQ+ DA +R+ +R G+++ F FETT+RQ DTL A+FVA 
Sbjct: 75  TTRVRGQVDLLGALLFMDNLNQQNVDATNRSGIRGGVNSNFIFETTIRQKDTLSAEFVAT 134

Query: 134 QEGGKNVGNISGR-SLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARN-YSHKAKGLT 191
           ++G + + +      LSL K+ Y ANV D+   +A+P+GAQCRD  +A N      KGLT
Sbjct: 135 KKGKEVLDDHDVEVPLSLRKVCYTANVNDFLSLMAIPMGAQCRDVAVASNSVDQLGKGLT 194

Query: 192 TISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQ 251
             SS  PPLL+ HNG  IG TVRKSN +ASLAQ V GL    GS+ + +  STFGQ+VCQ
Sbjct: 195 DFSSFGPPLLNLHNGSGIGITVRKSNFIASLAQFVVGLRSSSGSNTMENISSTFGQLVCQ 254

Query: 252 LSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGMNTQEIV 311
            ++G  LS++GLHQVP S     +   L  PI    Q   +E         L       V
Sbjct: 255 FTKGTKLSVLGLHQVPFSSKQHRNFGALAFPIVLSNQDEETE---------LVRERTTQV 305

Query: 312 STGSIALKLETELDENAKVGGWFEMQNSN-SNLRWAVTISDIFNEDLEWGVTFSGMHDGS 370
           S GSIA+ +E+ELD   K+GGW EM   N  +++WA+T+SD+  +   WG++  GM   S
Sbjct: 306 SAGSIAVMVESELDGFTKIGGWVEMNKLNPKSIQWAITMSDVSEDSFGWGMSLGGMIGDS 365

Query: 371 KGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL 417
              + +Q E++L   LG +F LK G +YV DG ++I ALM+R  WSL
Sbjct: 366 ASSDHFQAETYLKFNLGDKFCLKPGFAYVMDGSSKIGALMIRSNWSL 412

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466997|ref|XP_003603783.1| hypothetical protein MTR_3g114130 [Medicago truncatula] gi|355492831|gb|AES74034.1| hypothetical protein MTR_3g114130 [Medicago truncatula]

 Score =  346 bits (888), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 193/411 (46%), Positives = 249/411 (60%), Gaps = 15/411 (3%)

Query: 8   VEKVKGFIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKG 67
            E    F DS+F R      R   EILKRLQRESFS+ MK RDR DKVER++SFYK SKG
Sbjct: 12  AESSHDFFDSIFGR------RKSTEILKRLQRESFSDLMKLRDRQDKVERMISFYKSSKG 65

Query: 68  SPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLV 127
            PFQEASTHVR  +D  GA+L+ GD +QQ+ D + R+ ++TGI +RF F+T + + + L 
Sbjct: 66  GPFQEASTHVRGHMDFTGALLIKGDFNQQNLDIISRSGIKTGIDSRFVFQTAIGEENALA 125

Query: 128 ADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKA 187
           A+FVA Q+G ++  +     LSLAKLSY ANV D    +AVPVGAQCRD  +  N   + 
Sbjct: 126 AEFVATQKGKEHHSDALEMPLSLAKLSYKANVNDSLSLMAVPVGAQCRDVAVGSNSFDQE 185

Query: 188 KGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQ 247
           KGLT  SS  PPLL  HNG A G  +RKS  +ASLAQ V+GLG   GS+   +  STF Q
Sbjct: 186 KGLTDFSSFGPPLLKLHNGSAFGIAMRKSCFIASLAQFVAGLGTPSGSNTADNRYSTFLQ 245

Query: 248 VVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGMNT 307
           + CQ  RG  LS++  HQ+P           LTIP+    Q   SE    AS +  G  T
Sbjct: 246 LACQFPRGTKLSVLSSHQLPFVSKQLRKFGALTIPLVLSNQHEVSETEPEAS-TFRGTRT 304

Query: 308 QEIVSTGSIALKLETELDENAKVGGWFEMQNSN-SNLRWAVTISDIFNEDLEWGVTFSGM 366
           Q  VS GS A+ LE+ELD   K+GGW EM   +  + +WAVT++D+      WG++  G+
Sbjct: 305 Q--VSGGSAAIMLESELDGFTKLGGWVEMNTLDPKSAQWAVTLTDVSEGSSGWGMSLGGI 362

Query: 367 HDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIWSL 417
                G   +Q ES+L   +G +F LK G  Y  DGD++I +LMLR  WSL
Sbjct: 363 -----GAKHFQAESYLKFNMGDKFCLKPGLVYATDGDSKIASLMLRSDWSL 408

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	417
TAIR|locus:2202134	424	AT1G11320 "AT1G11320" [Arabido	0.997	0.981	0.461	1.4e-94

TAIR|locus:2202134 AT1G11320 "AT1G11320" [Arabidopsis thaliana (taxid:3702)]

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 196/425 (46%), Positives = 276/425 (64%)

Query:     1 MEAVTSAVEKVKGFIDS---LFHRS----QNSYSRNPIEILKRLQRESFSEQMKQRDRLD 53
             M+ + S +EKVK F  S   L  R     +N    NPI+ILKRLQRE+FS+ MK R+R +
Sbjct:     1 MDPIASVLEKVKSFTKSSQDLVSRHFGFHENPSRLNPIDILKRLQRETFSDLMKLRERQE 60

Query:    54 KVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTR 113
             KVER++S  KLSKG PFQE STHVR EVDVLGA+L+MG+ D++  + L++  VR G+ +R
Sbjct:    61 KVERIISSQKLSKGGPFQETSTHVRGEVDVLGAILLMGNTDEESFNGLNKEGVRPGLLSR 120

Query:   114 FTFETTMRQNDTLVADFVACQEGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQ 173
             F FET++R+ D LVA+ VA   G  +  +  G  LSLAK+ Y A++ DWF AIA+PVGA 
Sbjct:   121 FVFETSLRETDRLVAELVAGYNGAGSHRDFLGGELSLAKVFYKADINDWFSAIAIPVGAH 180

Query:   174 CRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQL 233
              RD + +   S++   LT +S L PPLLSQHNG AIG T RKSN+ ASLAQS+S + V+ 
Sbjct:   181 FRDIEASTVSSYQGMSLTEVSELGPPLLSQHNGSAIGLTFRKSNITASLAQSMSNVEVEQ 240

Query:   234 GSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASE 293
             G      C  TFGQV C + R + LSL+G HQV  S ++  S+  +T+P+ FL++  A+E
Sbjct:   241 GLTAPNRCFRTFGQVTCHILRSLKLSLLGCHQVLTSSSNLHSVGAITVPVSFLRRHTATE 300

Query:   294 NSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNSN-LRWAVTISDI 352
                 A    +  N    VS+ SIALKL++ +DE+ K+GGW E+QNS    ++W+V+I+D 
Sbjct:   301 PEPSAPPLEMSRNMNH-VSSSSIALKLDSLMDESTKLGGWIEIQNSREKQVKWSVSITDN 359

Query:   353 FNEDLEWGVTFSGMHDGSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLR 412
               +++ WG++  G+ DGS+  +Q+Q+ES+L   +G RF L     Y  + D +   LML+
Sbjct:   360 PEDEVGWGMSVGGVVDGSRNHDQFQVESYLKFNIGDRFRLSPCLVYHTNSDGRTIGLMLK 419

Query:   413 CIWSL 417
               WSL
Sbjct:   420 SHWSL 424


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      417       417   0.00082  118 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  250 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.53u 0.13s 32.66t   Elapsed:  00:00:01
  Total cpu time:  32.53u 0.13s 32.66t   Elapsed:  00:00:01
  Start:  Mon May 20 21:32:31 2013   End:  Mon May 20 21:32:32 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	417
PF04966	371	OprB: Carbohydrate-selective porin, OprB family; I	99.96
PF04380	79	BMFP: Membrane fusogenic activity; InterPro: IPR00	96.63
PRK09980	230	ompL outer membrane porin L; Provisional	94.55
PF06178	218	KdgM: Oligogalacturonate-specific porin protein (K	93.81
COG2960	103	Uncharacterized protein conserved in bacteria [Fun	92.44
PF07642	344	DUF1597: Outer membrane protein family (DUF1597);	91.34
PF11854	637	DUF3374: Protein of unknown function (DUF3374); In	90.91
PF11853	489	DUF3373: Protein of unknown function (DUF3373); In	90.75
PF10082	381	DUF2320: Uncharacterized protein conserved in bact	86.61
PF10805	106	DUF2730: Protein of unknown function (DUF2730); In	83.54
COG3937	108	Uncharacterized conserved protein [Function unknow	81.4

>PF04966 OprB: Carbohydrate-selective porin, OprB family; InterPro: IPR007049 The carbohydrate-selective porin OprB family includes the Pseudomonas aeruginosa porin B, a substrate-selective channel for a variety of different sugars

Probab=99.96  E-value=1.1e-27  Score=240.13  Aligned_cols=318  Identities=16%  Similarity=0.148  Sum_probs=215.9

Q ss_pred             CChHHHHHHHHHHhHHHHHHhhhhHHHHHHhhhhhhhCCCCCCCcceeEEEEEEEEEeeEeecCCcccccccccccccce
Q 014833           28 RNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVR  107 (417)
Q Consensus        28 r~dL~~LkRLQ~EF~aELatLr~RvD~LE~Rta~lEa~Q~~~ffSTTTkL~Gevif~~a~~~~~~~~~~~~~~~~~~~~~  107 (417)
                      |||++.++||+.||..||++|++|||.+|.|+.++|++|    ||+|||+.|++++.+..+.+.+               
T Consensus         1 r~~~~~~~~l~~~~~~dl~~l~G~~~g~~~~~~~~~~~g----~s~t~~~~~~~~~~~~~~~g~~---------------   61 (371)
T PF04966_consen    1 REDLAYLGRLDLEFDLDLAKLRGRVDGLEFRVNELERNG----FSTTTKLSGGNVFSVQEIFGGG---------------   61 (371)
T ss_pred             CCccchhHhHHhHhhhhHHHhcCCCCCcEEEEEEeeecC----CCcccccccccccccccccccC---------------
Confidence            789999999999999999999999999999999999999    8999999999999988765542               


Q ss_pred             eeeEEEEEEEeccccc---ceEEEEEeeccCCCcC--c-------------CCCCCCceEEeEEEEEee---eCCcEEEE
Q 014833          108 TGIHTRFTFETTMRQN---DTLVADFVACQEGGKN--V-------------GNISGRSLSLAKLSYVAN---VGDWFYAI  166 (417)
Q Consensus       108 ~g~r~RL~f~TSFtGk---D~L~trL~agn~~~~~--~-------------~~~~gn~v~l~kL~Y~fp---v~d~~~~~  166 (417)
                      -..++||+ ++||+++   |+|.+|+-..+....+  .             +.+....+.++++.|.||   ++.++.+.
T Consensus        62 ~~~~~~L~-~~~~~q~~~~d~l~~~~G~~~~~~~f~~~~~~~~~~f~n~~f~~~~~~~~~~~~~~~~~P~~~~G~~~~~~  140 (371)
T PF04966_consen   62 GNYRTRLN-ELSFTQKFFDDRLSLRLGKMNAGDDFDAYASDLGCQFLNSAFCGNPSLNVSIDSGWYTFPVSSWGARVRYQ  140 (371)
T ss_pred             cccceeee-eEEEEEEecCCeEEEEEEEccCCcccccccCcccccceeecccCCCccccccccccccCCcccceEEEEEE
Confidence            14689999 9999999   9999999888875422  0             111123367999999999   55555555


Q ss_pred             EEec----cccccCcccCCCCccCCCCcccccccCCCcccccCCeeEEEEEecCceEEEeeeeccCCCCCCCCCCCCCCc
Q 014833          167 AVPV----GAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVRKSNVVASLAQSVSGLGVQLGSDGIGHCL  242 (417)
Q Consensus       167 v~~~----G~~~~D~~~t~Np~~~~~~l~~~S~fgnPiy~~~~G~Gig~~~~~~~~~~sl~yl~~~~g~p~~~~gf~g~y  242 (417)
                      +.+.    ++-++......++.      +..+.|.   .....+.|+.+.++       ++|-..     ...++++|.|
T Consensus       141 ~~~~~~~~~gv~~~~~~~~~~~------~~~~g~~---~~~~~~~G~~~~~e-------~~~~~~-----~~~~~~~g~~  199 (371)
T PF04966_consen  141 PTPNLYLQAGVYDSNPDAGNNA------GNSSGFD---FSPFGGDGVFLIWE-------LGYRPS-----FGNGGLPGNY  199 (371)
T ss_pred             ecCceEEEEEEeecCCCccccc------cCcccee---ecccCCCceEEEEE-------EEeecc-----CCCCccCceE
Confidence            3321    11111111111110      0111110   00012233333332       333211     2345588999


Q ss_pred             cceEeEEEEeCCCceeeEEEeeecCCCCCCccCCCCcccccceeccccccCCccCCCCccCCCCccceeecceeEEEEEE
Q 014833          243 STFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGMNTQEIVSTGSIALKLET  322 (417)
Q Consensus       243 salgQl~~~P~~~~~lsltY~~~y~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ns~g~q~~~  322 (417)
                      .+.+++...+.+++...+.|++.|..+..     +    +                 .   ........+ ..++++-.|
T Consensus       200 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~-----------------~---~~~~~~~~g-~~~~~~q~~  249 (371)
T PF04966_consen  200 RLGAWYNTSPFDDLYSDLDYVPAYIQPAN-----G----G-----------------P---GRTHSGTYG-NYFGADQQL  249 (371)
T ss_pred             EEEEEEecCcCcchhhccccceeeccccc-----C----C-----------------c---ccccCCceE-EEEEEEEEE
Confidence            99999999999999999999998842000     0    0                 0   001123344 777888888


Q ss_pred             eecCCeEEEEEEeEEeccc-eEEEEeEEee---c----CCCCcccceeeccee--cC-----C--------CCCcceEEE
Q 014833          323 ELDENAKVGGWFEMQNSNS-NLRWAVTISD---I----FNEDLEWGVTFSGMH--DG-----S--------KGWNQYQLE  379 (417)
Q Consensus       323 ~i~~~~~lgGW~g~~~~~~-iw~wavtla~---~----~e~dlG~g~~~gg~~--~~-----~--------d~dts~hiE  379 (417)
                      ...+.+.+.||.++...+. .++|.+++++   .    +++|.. |+-++...  .+     .        ..++.+|+|
T Consensus       250 ~~~~~l~~f~~~g~~~~~~~~~~~~~~~Gl~~~g~f~~rp~D~~-Gi~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~E  328 (371)
T PF04966_consen  250 WRSDGLGLFGRFGYADGDTNPISWSVSAGLVYKGPFPSRPGDSL-GIGFGWARLSDDLRDYQADAGQLAGGPQRDEYVIE  328 (371)
T ss_pred             EeCCceEEEEEEeecCCCCceEEEEEEEeEEEECcccCCCCCeE-EEEEEeeeecCchhhhhhhhccccCCCCCccEEEE
Confidence            8888999999999887654 5555555553   2    566654 44443221  11     0        158999999


Q ss_pred             EEEeeccCCceEEeeeeEEEEcCCC---CcceEE--EeeecCC
Q 014833          380 SFLDLCLGKRFSLKLGTSYVADGDA---QIPALM--LRCIWSL  417 (417)
Q Consensus       380 afYky~l~dnIsITPGli~i~np~~---~~~al~--~~~~w~~  417 (417)
                      +||+|+|+|+|+|||++.||.||+.   ..+|+|  ||..+++
T Consensus       329 ~~Y~~~vt~~i~itP~lqyi~nP~~~~~~~~a~v~GlR~~~~F  371 (371)
T PF04966_consen  329 LYYRFQVTDNISITPDLQYIINPGGNPDNDDAWVVGLRTTFSF  371 (371)
T ss_pred             EEEEEEcCCCEEEEeeEEEEECCCCCCCCCCcEEEEEEEEEEC
Confidence            9999999999999999999999996   446655  6776653

This protein may facilitate diffusion of a variety of diverse compounds, but is probably restricted to carbohydrates, and does facilitate glucose fusion across the outer membrane.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane

>PF04380 BMFP: Membrane fusogenic activity; InterPro: IPR007475 BMFP consists of two structural domains, a coiled-coil C-terminal domain via which the protein self-associates as a trimer, and an N-terminal domain disordered at neutral pH but adopting an amphipathic alpha-helical structure in the presence of phospholipid vesicles, high ionic strength, acidic pH or SDS

Probab=96.63  E-value=0.003  Score=51.66  Aligned_cols=49  Identities=14%  Similarity=0.300  Sum_probs=38.6

Q ss_pred             HhHHHHhhhcccCCCCCCCCChHHHHHHHHHHhHHHHHHhhhhHHHHHHhhhhhhhC
Q 014833            9 EKVKGFIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLS   65 (417)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~r~dL~~LkRLQ~EF~aELatLr~RvD~LE~Rta~lEa~   65 (417)
                      ..|++.+.+.+.+. ++++||+.++++       +.|+.+|.|+++||+|++.||+.
T Consensus        31 ~~~r~~l~~~l~kl-dlVtREEFd~q~-------~~L~~~r~kl~~LEarl~~LE~~   79 (79)
T PF04380_consen   31 KNIRARLQSALSKL-DLVTREEFDAQK-------AVLARTREKLEALEARLAALEAQ   79 (79)
T ss_pred             HHHHHHHHHHHHHC-CCCcHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcC
Confidence            34455566666664 588899988876       56899999999999999999974

BMFP interacts with phospholipid vesicles though the predicted amphipathic alpha-helix induced in the N-terminal half of the protein and promotes aggregation and fusion of vesicles in vitro.

>PRK09980 ompL outer membrane porin L; Provisional

Probab=94.55  E-value=0.051  Score=53.00  Aligned_cols=42  Identities=10%  Similarity=0.112  Sum_probs=34.9

Q ss_pred             ceEEEEEEe-eccCCceEEeeeeEEEEcCCCCcceEEEeeecC
Q 014833          375 QYQLESFLD-LCLGKRFSLKLGTSYVADGDAQIPALMLRCIWS  416 (417)
Q Consensus       375 s~hiEafYk-y~l~dnIsITPGli~i~np~~~~~al~~~~~w~  416 (417)
                      ---+|+.|+ |+++|+++||||+.+..+++.-+=.-=||-.|.
T Consensus        71 ~~E~~~sY~~~k~~d~~tl~PG~~~~s~s~~~~Y~PyLr~~y~  113 (230)
T PRK09980         71 YNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYK  113 (230)
T ss_pred             ceEEEEEEEeEecCCCEEEecceEEEecCCCceEeeEEEEEEE
Confidence            446899998 599999999999999999988776666666654

>PF06178 KdgM: Oligogalacturonate-specific porin protein (KdgM); InterPro: IPR009331 This family consists of several bacterial proteins which are homologous to the oligogalacturonate-specific porin protein KdgM (Q934G3 from SWISSPROT) from Erwinia chrysanthemi

Probab=93.81  E-value=0.076  Score=51.26  Aligned_cols=41  Identities=20%  Similarity=0.200  Sum_probs=31.4

Q ss_pred             ceEEEEEEeeccCCceEEeeeeEEEEcCCCCcceEEEeeec
Q 014833          375 QYQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIW  415 (417)
Q Consensus       375 s~hiEafYky~l~dnIsITPGli~i~np~~~~~al~~~~~w  415 (417)
                      --.+|+.|+|+|+||++|+||+.+..+.+.-+=.--||-.|
T Consensus        61 g~E~~~~y~~k~~d~~~l~PG~~~~~~s~~~~yrPylk~~Y  101 (218)
T PF06178_consen   61 GNEFEISYRYKLNDNFTLQPGFSLESNSDGTQYRPYLKLGY  101 (218)
T ss_dssp             EEEEEEEE-EESSSSEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             eeEEEEEEEEEcCCCEEEecceEEEECCCccEEeeEEEEEE
Confidence            34689999999999999999999888877665555555443

The phytopathogenic Gram-negative bacteria E. chrysanthemi secretes pectinases, which are able to degrade the pectic polymers of plant cell walls, and uses the degradation products as a carbon source for growth. KdgM is a major outer membrane protein, whose synthesis is strongly induced in the presence of pectic derivatives. KdgM behaves like a voltage-dependent porin that is slightly selective for anions and that exhibits fast block in the presence of trigalacturonate. In contrast to most porins, KdgM seems to be monomeric [].; PDB: 2WJQ_A 2WJR_A.

>COG2960 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.44  E-value=0.23  Score=42.59  Aligned_cols=51  Identities=10%  Similarity=0.251  Sum_probs=28.0

Q ss_pred             HHhHHHHhhhcccCCCCCCCCChHHHHHHHHHHhHHHHHHhhhhHHHHHHhhhhhhhCC
Q 014833            8 VEKVKGFIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSK   66 (417)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~r~dL~~LkRLQ~EF~aELatLr~RvD~LE~Rta~lEa~Q   66 (417)
                      =-+|++..++.|.+-+ +++||+.++.+..       |+.=|++.+.||+|+++||+..
T Consensus        39 E~~~r~~~q~~lnkLD-lVsREEFdvq~qv-------l~rtR~kl~~Leari~~LEarl   89 (103)
T COG2960          39 EKAFRAQLQRQLNKLD-LVSREEFDVQRQV-------LLRTREKLAALEARIEELEARL   89 (103)
T ss_pred             HHHHHHHHHHHHhhhh-hhhHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHh
Confidence            3345555555555432 4455555543332       4555666667777777777665

>PF07642 DUF1597: Outer membrane protein family (DUF1597); InterPro: IPR011486 This is a family of proteins for which no function is known yet

Probab=91.34  E-value=17  Score=36.49  Aligned_cols=107  Identities=17%  Similarity=0.081  Sum_probs=71.5

Q ss_pred             CCceEEeEEEEEeeeCCcEEEEEEe----ccccccCcccCCCCccCCCCcccccccCCCcccccCCeeEEEEEe-cCceE
Q 014833          145 GRSLSLAKLSYVANVGDWFYAIAVP----VGAQCRDFDIARNYSHKAKGLTTISSLDPPLLSQHNGGAIGFTVR-KSNVV  219 (417)
Q Consensus       145 gn~v~l~kL~Y~fpv~d~~~~~v~~----~G~~~~D~~~t~Np~~~~~~l~~~S~fgnPiy~~~~G~Gig~~~~-~~~~~  219 (417)
                      .-.+.-.-+.|+ |+++.+++.++=    +|.+  -+.+..|+..+   .+-...++ |.+.    .|+-++|. .+++.
T Consensus        84 ~~~i~qAyv~~~-~~~~gl~v~~G~f~t~iGyE--~~~~~~N~~ys---~s~~~~~~-P~~~----tGv~~~y~~~d~~~  152 (344)
T PF07642_consen   84 GFAIPQAYVSYK-PPGKGLSVKAGRFYTPIGYE--SIFAPDNFNYS---RSYLFNYG-PFTH----TGVRATYAFNDKWS  152 (344)
T ss_pred             ccchhheEEEEE-ecCCCEEEEEeeeeCCCCee--ccCCCCCceEe---hhhhcccC-CcEE----EeEEEEEEcCCCEE
Confidence            456777778888 999999999853    4443  35566677653   12223343 6664    35778887 46788


Q ss_pred             EEeeeeccCCCCCCCCCCCCCCccceEeEEEEeCCCceeeEEEeee
Q 014833          220 ASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQ  265 (417)
Q Consensus       220 ~sl~yl~~~~g~p~~~~gf~g~ysalgQl~~~P~~~~~lsltY~~~  265 (417)
                      +.++. ..++..-  ..-.++.++..+|+.|.|.+++.+.+.+...
T Consensus       153 ~~~~v-~nG~d~~--~~~~n~~~~~~~~~~y~~~~~~~~~~~~~~g  195 (344)
T PF07642_consen  153 LMLGV-VNGWDTI--FFDNNGGPSFGGQLSYSPNGKLSLYLNYYYG  195 (344)
T ss_pred             EEEEE-ECCcccc--cccCCCCcEEEEEEEEeeCCCeEEEEEEEeC
Confidence            88863 3332111  1124568899999999999999999888765

>PF11854 DUF3374: Protein of unknown function (DUF3374); InterPro: IPR020016 Members of this protein family are integral proteins of the bacterial outer membrane, associated with multi-haem c-type cytochromes involved in electron transfer [, ]

Probab=90.91  E-value=2.1  Score=47.57  Aligned_cols=121  Identities=19%  Similarity=0.216  Sum_probs=72.3

Q ss_pred             eEeEEEEeCCCceeeEEEeeecCCCCCCccCCCCcccccceeccccccCCccCCCCccCCCCccceeecceeEEEEEEee
Q 014833          245 FGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGMNTQEIVSTGSIALKLETEL  324 (417)
Q Consensus       245 lgQl~~~P~~~~~lsltY~~~y~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ns~g~q~~~~i  324 (417)
                      =+.+.|+|.+.+.|++++-..-.       +....  .+|                    .  .+... .+|++.++|++
T Consensus       436 ~l~~~~~~~~~l~l~~~~~~~~D-------dY~~t--~~G--------------------L--~~~~~-~~~~ld~~y~~  483 (637)
T PF11854_consen  436 ELRANYSPFEDLSLSLSGRYAND-------DYDDT--DIG--------------------L--TESDD-YGYDLDASYQP  483 (637)
T ss_pred             EEEeeeccccceEEeEEEEEccC-------CCCCc--ccc--------------------c--cccee-eeeeeeEEEEE
Confidence            35788999999888888754321       11110  011                    1  22333 67999999999


Q ss_pred             cCCeEEEEEEeEEeccc---------eEEEEeEEeecCCCCcccceeecceecC--------------------------
Q 014833          325 DENAKVGGWFEMQNSNS---------NLRWAVTISDIFNEDLEWGVTFSGMHDG--------------------------  369 (417)
Q Consensus       325 ~~~~~lgGW~g~~~~~~---------iw~wavtla~~~e~dlG~g~~~gg~~~~--------------------------  369 (417)
                      +|++.+.+|.++.+.+.         .-.|-..+-+ +-.-+|-|+...|++.+                          
T Consensus       484 ~~~l~~~af~~~q~~~s~Q~gs~~~~~~~W~~~~~D-~~~~~G~G~~~~~l~~~kL~lg~dYsys~~~s~~~~~~~~~~~  562 (637)
T PF11854_consen  484 SDDLSLYAFYNQQWIDSDQAGSQNFSTPDWTSDTED-KVTTVGAGFSYQGLMDDKLSLGLDYSYSDSDSDTDVTQGGSGP  562 (637)
T ss_pred             CCCeEEEEEEEeEeehhhhccccCccCCCccccccc-eeEEEEeceEeecccCccEEEeeeEEEecCccceEeecccccC
Confidence            99999999999865421         2234333333 10123333333222100                          


Q ss_pred             -CC-CCcceEEEEEEeeccCCceEEeeeeEE
Q 014833          370 -SK-GWNQYQLESFLDLCLGKRFSLKLGTSY  398 (417)
Q Consensus       370 -~d-~dts~hiEafYky~l~dnIsITPGli~  398 (417)
                       +| .-+.-.||+|-+|+|++++++.=..+|
T Consensus       563 ~pd~~~~~h~l~~~~~y~ls~~~~lrl~y~y  593 (637)
T PF11854_consen  563 YPDYYSRQHNLNLYARYQLSKNMSLRLDYRY  593 (637)
T ss_pred             CCCceeeEEEEEEEEEEEeCCCeEEEEEEEE
Confidence             12 223336999999999999998877654

The MtrB protein of Shewanella oneidensis MR-1 (SO1776) has been shown to form a complex with 1:1:1 stochiometry with the small, periplasmic decahaem cytochrome MtrA and large, surface-exposed decahaem cytochrome MtrC.

>PF11853 DUF3373: Protein of unknown function (DUF3373); InterPro: IPR021803 This family of proteins are functionally uncharacterised

Probab=90.75  E-value=4.1  Score=43.97  Aligned_cols=131  Identities=10%  Similarity=0.108  Sum_probs=84.4

Q ss_pred             CCCChHHHHHHHHHHhHHHHHHhhhhHHHHHHhhhhhhhCCCCCCCcceeEEEEEEEEEeeEeecCCccc-------ccc
Q 014833           26 YSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMMGDIDQ-------QHA   98 (417)
Q Consensus        26 ~~r~dL~~LkRLQ~EF~aELatLr~RvD~LE~Rta~lEa~Q~~~ffSTTTkL~Gevif~~a~~~~~~~~~-------~~~   98 (417)
                      +.-+|++.+|+ .||...||.+|+..++.|+.|+...|.|-    -.--.|+.|+--+.+-..-..+...       +..
T Consensus        22 a~~~~~~~~qk-ie~L~kql~~Lk~q~~~l~~~v~k~e~~s----~~d~lk~~~DfRt~~Dsi~yk~~~~~~~~~~~~~~   96 (489)
T PF11853_consen   22 AMADDIDLLQK-IEALKKQLEELKAQQDDLNDRVDKVEKHS----AGDNLKFGGDFRTRYDSIQYKTVDYGQMMNPNQMV   96 (489)
T ss_pred             hhhhhhHHHHH-HHHHHHHHHHHHHhhcccccccchhhHhh----hcCcEEEeeEEEEEEeccccccccccccccccCCC
Confidence            55778888884 46788999999999999999998888877    2344455555555443322221000       000


Q ss_pred             cc-cccccceeeeEEEEEEEecccccceEEEEEeeccCCC-----------------cCc----CCCCCCceEEeEEEEE
Q 014833           99 DA-LDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEGG-----------------KNV----GNISGRSLSLAKLSYV  156 (417)
Q Consensus        99 ~~-~~~~~~~~g~r~RL~f~TSFtGkD~L~trL~agn~~~-----------------~~~----~~~~gn~v~l~kL~Y~  156 (417)
                      +. ..+++.....|.||++..--+.+=....||..-..-.                 .++    ...+++.|.|++-+..
T Consensus        97 ~g~~~~Nd~l~TNRl~Lnm~ak~~dn~~f~grL~myK~fG~~~~~~~~~~~~~~~~~~~D~~~~~~psd~~LrV~rAYf~  176 (489)
T PF11853_consen   97 PGYKYNNDSLYTNRLRLNMKAKATDNVSFTGRLSMYKAFGAASDSSGNQPFFANRSGNFDWTSGENPSDDTLRVDRAYFL  176 (489)
T ss_pred             CCcCccccceeeeeeecccccccCCCeEEEEEEeeehhhCccccccCCCcccccccccccccccCCCCCCcEEEEEEEEE
Confidence            11 1234467788999999999888888889997744411                 011    1245677888888776


Q ss_pred             ee-eCC
Q 014833          157 AN-VGD  161 (417)
Q Consensus       157 fp-v~d  161 (417)
                      +. ++|
T Consensus       177 y~ni~d  182 (489)
T PF11853_consen  177 YKNIGD  182 (489)
T ss_pred             eecCCC
Confidence            65 666

This protein is found in bacteria. Proteins in this family are typically between 472 to 574 amino acids in length.

>PF10082 DUF2320: Uncharacterized protein conserved in bacteria (DUF2320); InterPro: IPR018759 This domain has no known function

Probab=86.61  E-value=32  Score=34.83  Aligned_cols=97  Identities=9%  Similarity=0.014  Sum_probs=61.5

Q ss_pred             eeEEEEEec---CceEEEeeeeccCCCCCCCCCCCCCCccceEeEEEEeCCCceeeEEEeeecCCCCCCccCCCCccccc
Q 014833          207 GAIGFTVRK---SNVVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPI  283 (417)
Q Consensus       207 ~Gig~~~~~---~~~~~sl~yl~~~~g~p~~~~gf~g~ysalgQl~~~P~~~~~lsltY~~~y~~~~~~~~~~g~~~~~~  283 (417)
                      .-+|+.|..   -...+.+||......++. ..-|.| .+.=+.|.|+|+....+.|+.-+.+..+..     .      
T Consensus       223 ~~~G~~~~~t~~~~g~~~~Gy~~~~~d~~~-~~d~~g-~~~~~~l~w~pt~~t~~~l~~~r~~~~~~~-----~------  289 (381)
T PF10082_consen  223 VLAGVSWDLTGKTRGEAKVGYQRRDFDDPS-RRDFSG-PSWDASLTWSPTPKTTVTLSASRSIEESTD-----A------  289 (381)
T ss_pred             EEEEEEEcccCcEEEEEEEEEEEeeccCCC-ccCCCc-eEEEEEEEEeccCceEEEEEEEEEEcCccc-----C------
Confidence            346677762   256677888776643332 222443 333468899999999999999888743100     0      


Q ss_pred             ceeccccccCCccCCCCccCCCCccceeecceeEEEEEEeecCCeEEEEEEeEEec
Q 014833          284 GFLKQRNASENSVGASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNS  339 (417)
Q Consensus       284 g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ns~g~q~~~~i~~~~~lgGW~g~~~~  339 (417)
                                            ...-... ..+.++..|++.+++.+.+=++|.+.
T Consensus       290 ----------------------~~~~~~~-~~~~~~~~h~~~~~l~~~~~~~~~~~  322 (381)
T PF10082_consen  290 ----------------------GGSYVRT-TSVSLGWTHQLTPRLSLSLSAGYENR  322 (381)
T ss_pred             ----------------------CCcEEEE-EEEEEEEEEEeeeeEEEEEEEEEEEe
Confidence                                  0011222 66778899999999988887777654

>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins

Probab=83.54  E-value=2  Score=36.95  Aligned_cols=43  Identities=19%  Similarity=0.155  Sum_probs=36.7

Q ss_pred             cCCCCCCCCChHHHHHHHHHHhHHHHHHhhhhHHHHHHhhhhh
Q 014833           20 HRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFY   62 (417)
Q Consensus        20 ~~~~~~~~r~dL~~LkRLQ~EF~aELatLr~RvD~LE~Rta~l   62 (417)
                      ..-+++|+++|+..|+-.-.|-..|+.+|+++++.+++.+..|
T Consensus        56 ~~l~~LPt~~dv~~L~l~l~el~G~~~~l~~~l~~v~~~~~lL   98 (106)
T PF10805_consen   56 TKLEHLPTRDDVHDLQLELAELRGELKELSARLQGVSHQLDLL   98 (106)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            4556788899999999999999999999999999998877765

The proteins, which include HI1498 and Gp25, from phage Mu, are currently uncharacterised.

>COG3937 Uncharacterized conserved protein [Function unknown]

Probab=81.40  E-value=1.2  Score=38.67  Aligned_cols=34  Identities=21%  Similarity=0.215  Sum_probs=25.1

Q ss_pred             HHHHHHHHhHHHH--------HHhhhhHHHHHHhhhhhhhCC
Q 014833           33 ILKRLQRESFSEQ--------MKQRDRLDKVERLLSFYKLSK   66 (417)
Q Consensus        33 ~LkRLQ~EF~aEL--------atLr~RvD~LE~Rta~lEa~Q   66 (417)
                      .++|=-+|.-.++        ..|++|||.||++++.||+.+
T Consensus        65 K~~r~i~~ml~~~~~~r~~~~~~l~~rvd~Lerqv~~Lenk~  106 (108)
T COG3937          65 KIPRKIEEMLSDLEVARQSEMDELTERVDALERQVADLENKL  106 (108)
T ss_pred             hhhHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHh
Confidence            3455444544444        589999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	417
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.3 bits (145), Expect = 6e-10
 Identities = 70/478 (14%), Positives = 140/478 (29%), Gaps = 169/478 (35%)

Query: 19  FHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVR 78
           F   ++ Y     +IL   + ++F +    +D  D  + +LS                 +
Sbjct: 9   FETGEHQYQYK--DILSVFE-DAFVDNFDCKDVQDMPKSILS-----------------K 48

Query: 79  AEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVACQEGGK 138
            E+D    ++M  D                   T   F T + + + +V  FV       
Sbjct: 49  EEID---HIIMSKDAVSG---------------TLRLFWTLLSKQEEMVQKFVE------ 84

Query: 139 NVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRD-FDIARNYSHKAKGLTTISSLD 197
                      + +++Y      +  +   P+  + R    + R Y  +   L      D
Sbjct: 85  ----------EVLRINY-----KFLMS---PIKTEQRQPSMMTRMYIEQRDRLYN----D 122

Query: 198 PPLLSQHNGGAIGFTVRKSNVVASL------AQSVSGLGVQLGSDGIG-HCLST----FG 246
             + +++N       V +      L       +    + +  G  G G   ++       
Sbjct: 123 NQVFAKYN-------VSRLQPYLKLRQALLELRPAKNVLID-GVLGSGKTWVALDVCLSY 174

Query: 247 QVVCQLSRGVN-LSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGM 305
           +V C++   +  L+ +     P++      L  L      L Q + +  S    +S++ +
Sbjct: 175 KVQCKMDFKIFWLN-LKNCNSPETV-----LEMLQ---KLLYQIDPNWTSRSDHSSNIKL 225

Query: 306 NTQEIVSTGSIALKLETE------LDE--NAKVGGW--FEMQ---------NSNSNLRWA 346
               I +     LK +        L    NAK   W  F +             ++   A
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA--WNAFNLSCKILLTTRFKQVTDFLSA 283

Query: 347 VTISDIFNEDLEWGVT-------FS---------------------------GMHDGSKG 372
            T + I  +     +T                                     + DG   
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343

Query: 373 WNQY------QLESFLDLCLG--------KRFSLKLGTSYVADGDAQIPALMLRCIWS 416
           W+ +      +L + ++  L         K F  +L    V    A IP ++L  IW 
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF-DRLS---VFPPSAHIPTILLSLIWF 397

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	417
4gey_A	436	Porin B; beta-barrel, outer membrane channel, carb	99.87
2wjr_A	214	Probable N-acetylneuraminic acid outer membrane C	93.79
2yy0_A	53	C-MYC-binding protein; conserved hypothetical prot	87.82
3prn_A	289	Porin; integral membrane protein, pore eyelet muta	85.75

>4gey_A Porin B; beta-barrel, outer membrane channel, carbohydrate transport, transport protein; HET: BGC C8E DMU; 2.70A {Pseudomonas putida} PDB: 4gf4_A*

Probab=99.87  E-value=7.8e-20  Score=185.43  Aligned_cols=270  Identities=9%  Similarity=0.001  Sum_probs=150.1

Q ss_pred             EEEEEEEec-ccccceEEEEEeeccCCC--------------cC----cCCCCCCceEEeEEEEEeeeCC-cEEEEEEec
Q 014833          111 HTRFTFETT-MRQNDTLVADFVACQEGG--------------KN----VGNISGRSLSLAKLSYVANVGD-WFYAIAVPV  170 (417)
Q Consensus       111 r~RL~f~TS-FtGkD~L~trL~agn~~~--------------~~----~~~~~gn~v~l~kL~Y~fpv~d-~~~~~v~~~  170 (417)
                      +..++|+++ ++|+|.+++++++.++..              ..    .....++.+.|++|+|++++.| ++.+.++-.
T Consensus        73 ~~~~~~Dl~k~~G~~g~~~~~~~~~~~G~~~s~~~~~~~~~g~~~~~~~~~~~~~~~rL~~L~y~q~~~d~~~~i~~G~~  152 (436)
T 4gey_A           73 ALGAHLDLQKILGWHDAEFKLAITERSGRNLSNDRISDPRAGQFSSVQEVWGRGQTWRLTQMWIKQKYFDGALDVKFGRF  152 (436)
T ss_dssp             EEEEEEEHHHHTCCTTEEEEEEEEEEEECCHHHHTTSBTTBCCSSCSCTTCCSCSSEEEEEEEEEEEETTTTEEEEEEEE
T ss_pred             EEEEEEEhHHhCCCCCcEEEEEEEEecCCCccccccccccccccccccccccCCCeEEEEEEEEEeEcCCCeEEEEEccc
Confidence            344445543 899999999999877631              00    0112357899999999999976 577877765


Q ss_pred             cccccCcccCCCCccCC--CCcccccccCCCccccc-CCeeEEEEEe-cCceEEEeeeeccCCCCCCCCCCC----CCC-
Q 014833          171 GAQCRDFDIARNYSHKA--KGLTTISSLDPPLLSQH-NGGAIGFTVR-KSNVVASLAQSVSGLGVQLGSDGI----GHC-  241 (417)
Q Consensus       171 G~~~~D~~~t~Np~~~~--~~l~~~S~fgnPiy~~~-~G~Gig~~~~-~~~~~~sl~yl~~~~g~p~~~~gf----~g~-  241 (417)
                      ... +||......+...  .+...+...+++.+... .+.|+.+.|+ .+.+.++++|+..++.++..++|+    ++. 
T Consensus       153 ~~~-~~f~~~~~~f~~~~~~~~~~~~~~~~~~~~~p~~~~G~~~~~~~~~~~~~~~g~~~~np~~~~~~~g~~~~~~~~~  231 (436)
T 4gey_A          153 GEG-EDFNSFPCDFQNLAFCGSQVGNWVGGIWYNWPVSQWALRVKYNITPAFFVQVGAFEQNPSNLETGNGFKLSGSGTK  231 (436)
T ss_dssp             CGG-GTSSCCCCCSSSGGGSSCSHHHHTTTTCCCTTCCEEEEEEEEEEETTEEEEEEEEEECGGGGSTTCTTCCSCTTCC
T ss_pred             ccc-chhcccccccccccccccccccccCcccccCCCccceEEEEEecccceEEEEEEEecCCCCCCCCCCcccCCCCCc
Confidence            543 4454333332211  11112222223333222 3457777777 468999999998876655544443    222 


Q ss_pred             -ccceEeEEEEeCC-----CceeeEEEeeecCCCCCCccCCCCcccccceeccccccCCccCCCCccCCCCccceee-cc
Q 014833          242 -LSTFGQVVCQLSR-----GVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVGASASSLGMNTQEIVS-TG  314 (417)
Q Consensus       242 -ysalgQl~~~P~~-----~~~lsltY~~~y~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~n  314 (417)
                       +...+|+.|+|..     ..+++..|.+++...  ...+...  .+..              ..   + ....... ..
T Consensus       232 G~~~~~e~~~~~~~~~lpg~y~~g~~y~~~~~~d--~~~~~~g--~~~~--------------~~---~-~~~~~~~~~~  289 (436)
T 4gey_A          232 GAIMPMEAVWSPKVNGLPGEYRLGYYYSTAKADD--VYDDVNG--NPQA--------------LT---G-EAFKSHSSKH  289 (436)
T ss_dssp             EEEEEEEEEECCEETTEEEEEEEEEEEECSCEEE--EEEETTS--SBHH--------------HH---C-CCEEEESCEE
T ss_pred             ceEEEEEeeeccccCCCccEEEEeeEEecCCccc--eeccccC--cccc--------------cc---C-ccccccccce
Confidence             3344688888754     345555555543210  0000000  0000              00   0 0011111 13


Q ss_pred             eeEEEEEEeecC-----CeEEEEEEeEEecc--c---eEEEEeEEee-----cCCCC-cccceeeccee-----------
Q 014833          315 SIALKLETELDE-----NAKVGGWFEMQNSN--S---NLRWAVTISD-----IFNED-LEWGVTFSGMH-----------  367 (417)
Q Consensus       315 s~g~q~~~~i~~-----~~~lgGW~g~~~~~--~---iw~wavtla~-----~~e~d-lG~g~~~gg~~-----------  367 (417)
                      .+.+.++.++..     .--++.|+.+..+.  .   -+.|.+.+..     ..+.| +|+++....+-           
T Consensus       290 g~~~~~~q~l~~~~~~~~~gl~~f~~~~~~~~~~~~~~~~~~~Gl~~~g~~~~Rp~D~~g~~~~~~~~s~~~~~~~~~~~  369 (436)
T 4gey_A          290 GWWVVAQQQVTAHGGDVNRGLSLFANFTVHDKATNVVDNYQQVGLVYKGAFDARPKDDIGFGVARIHVNDDVKKRAELLN  369 (436)
T ss_dssp             EEEEEEEEECCCGGGCTTSEEEEEEEEEEECTTTCSEEEEEEEEEEEECSSTTSTTCEEEEEEEEEEECHHHHHHHHHHH
T ss_pred             EEEEEEEEEEEecCCCCCcceeEEeEEEecCCCCceeeeEEEEeEEEEccccCCCCCceeEEEEEEecCHhHhhhhhhhc
Confidence            455666666632     33466666655432  1   3555555553     12334 56554432220           


Q ss_pred             --c----------CCCCCcceEEEEEEeeccCCceEEeeeeEEEEcCC
Q 014833          368 --D----------GSKGWNQYQLESFLDLCLGKRFSLKLGTSYVADGD  403 (417)
Q Consensus       368 --~----------~~d~dts~hiEafYky~l~dnIsITPGli~i~np~  403 (417)
                        .          ...+++++|+|+||||||+|||+|||++.||+||+
T Consensus       370 ~~~G~~~~~~~~~~~~~~~e~~~E~~Y~~qvt~~i~itP~~qyI~nP~  417 (436)
T 4gey_A          370 AQSGINDYDNPGFVPLQRTEYNAELYYGFHVTNWLTVRPNLQYIKSPG  417 (436)
T ss_dssp             HHHTCCCTTSTTCCCCCCEEEEEEEEEEEECSSSEEEEEEEEEEESGG
T ss_pred             cccCcccccCCCCCCCCCCCEEEEEEEEeecCCCEEEEeeEEEEECCC
Confidence              0          12468999999999999999999999999999984

>2wjr_A Probable N-acetylneuraminic acid outer membrane C protein NANC; cell membrane, ION transport, transmembrane, porin, membrane transport; HET: EPE; 1.80A {Escherichia coli} PDB: 2wjq_A*

Probab=93.79  E-value=0.049  Score=51.09  Aligned_cols=40  Identities=13%  Similarity=0.212  Sum_probs=31.3

Q ss_pred             eEEEEEEeeccCCceEEeeeeEEEEcCCCCcceEEEeeec
Q 014833          376 YQLESFLDLCLGKRFSLKLGTSYVADGDAQIPALMLRCIW  415 (417)
Q Consensus       376 ~hiEafYky~l~dnIsITPGli~i~np~~~~~al~~~~~w  415 (417)
                      --+|+.|+|+|+||++|+||+...++.+.-+=.--||-.|
T Consensus        54 ~E~~~~Y~~k~~d~~~l~PG~~~~~~s~~~~YkPylk~~Y   93 (214)
T 2wjr_A           54 VQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSW   93 (214)
T ss_dssp             EEEEEEECEESSSSEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             EEEEEEEEEEcCCCEEEecceEEEecCCCcEEeeEEEEeE
Confidence            3679999999999999999999888887654444444443

>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}

Probab=87.82  E-value=0.6  Score=34.48  Aligned_cols=48  Identities=17%  Similarity=0.173  Sum_probs=27.4

Q ss_pred             HhhhcccCCCCCCCCChHHHHHHHHHHhHHHHHHhhhhHHHHHHhhhhhh
Q 014833           14 FIDSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRLDKVERLLSFYK   63 (417)
Q Consensus        14 ~~~~~~~~~~~~~~r~dL~~LkRLQ~EF~aELatLr~RvD~LE~Rta~lE   63 (417)
                      ||..+++..  .+...|.+.||+=-+|..+++..|..+++.|.+++..+|
T Consensus         6 fIk~~LG~~--~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~~e   53 (53)
T 2yy0_A            6 FLKHHLGAA--TPENPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQYE   53 (53)
T ss_dssp             ------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHcCCC--CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            444555521  155889999998666666667777777777766665543

>3prn_A Porin; integral membrane protein, pore eyelet mutant, membra protein; HET: C8E; 1.90A {Rhodobacter blasticus} SCOP: f.4.3.1 PDB: 1bh3_A* 1prn_A* 7prn_A* 6prn_A* 5prn_A* 2prn_A* 8prn_A* 1h6s_1

Probab=85.75  E-value=23  Score=34.45  Aligned_cols=266  Identities=11%  Similarity=0.003  Sum_probs=130.7

Q ss_pred             eEEEEEEEEEeeEeecCCcccccccccccccceeeeEEEEEEEecccccc----eEEEEEeeccCCCcCcCCCCCCceEE
Q 014833           75 THVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQND----TLVADFVACQEGGKNVGNISGRSLSL  150 (417)
Q Consensus        75 TkL~Gevif~~a~~~~~~~~~~~~~~~~~~~~~~g~r~RL~f~TSFtGkD----~L~trL~agn~~~~~~~~~~gn~v~l  150 (417)
                      .||.|-.-|.+.-.  ++.      ....+++++.-|.||+|.-|..=-.    --+.||++.+.....  ...++...+
T Consensus         2 v~~~G~~~fg~~y~--~~~------~~~~~~t~~~sr~rl~~~~s~etD~Gl~fga~~r~~~~~g~~~~--~~~~~~~~~   71 (289)
T 3prn_A            2 ISLNGYGRFGLQYV--EDR------GVGLEDTIISSRLRINIVGTTETDQGVTFGAKLRMQWDDGDAFA--GTAGNAAQF   71 (289)
T ss_dssp             EEEEEEEEEEEEEE--TTC------STTCCSEEEEEEEEEEEEEEECCTTSCEEEEEEEEEEETTCGGG--CCCBCCCEE
T ss_pred             EEEeeEEEEeeEEe--cCc------CCCccceEEEEEEEEEEeeeEEecCCeEEEEEEEEEeccCCccc--cccCCcceE
Confidence            57888888887753  221      1134457788899999988765433    235677764422111  011122222


Q ss_pred             eEEEEEeeeCCcEEEEEEeccccccCcccCCCCccCCCCccc--c----ccc---C---CCcccc-cCCeeEEEEEecCc
Q 014833          151 AKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGLTT--I----SSL---D---PPLLSQ-HNGGAIGFTVRKSN  217 (417)
Q Consensus       151 ~kL~Y~fpv~d~~~~~v~~~G~~~~D~~~t~Np~~~~~~l~~--~----S~f---g---nPiy~~-~~G~Gig~~~~~~~  217 (417)
                      - +.|     .-+++.+.-+-+..++..... |-  +.|+..  |    +.|   +   .+ |.. -++.++=+.|....
T Consensus        72 ~-v~~-----g~~~v~~G~~~ga~d~~~~~~-~~--~~G~~~~~~~~~~~~~~~~~~~~~~-y~~~~~~~~l~~~ys~Gg  141 (289)
T 3prn_A           72 W-TSY-----NGVTVSVGNVDTAFDSVALTY-DS--EMGYEWSSFGDAQSSFFAYNSKYDA-SGALDNYNGIAVTYSISG  141 (289)
T ss_dssp             E-EEE-----TTEEEEEESCCCHHHHSSSTT-TT--CBTTTTBCTTSCCSCCCCCCCSCCT-TSTTTTCEEEEEEEECSS
T ss_pred             E-EEc-----CcEEEEecCcCChhhhhhhhc-cc--CCCcccccccccccccccccccccc-ccccCCCceEEEEEEecC
Confidence            1 333     347788877777766433321 11  122222  1    111   0   00 111 23567778888778


Q ss_pred             eEEEeeeeccCCCCCCCCCCCCCCccceEeEEEEeCCCceeeEEEeeecCCCCCCccCCCCcccccceeccccccCCccC
Q 014833          218 VVASLAQSVSGLGVQLGSDGIGHCLSTFGQVVCQLSRGVNLSLMGLHQVPKSRNHRVSLRPLTIPIGFLKQRNASENSVG  297 (417)
Q Consensus       218 ~~~sl~yl~~~~g~p~~~~gf~g~ysalgQl~~~P~~~~~lsltY~~~y~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~  297 (417)
                      |+++++|-....+.....  -.-.++.  =+.|+ ..++.+++.|. .   .+. ..+....   +++.. ..+. +...
T Consensus       142 fs~~~Sy~~~~~~~~~~~--~~d~~~l--~a~Yt-~g~~~v~aaY~-~---d~a-g~~D~~~---~~l~~-~y~f-G~~~  206 (289)
T 3prn_A          142 VNLYLSYVDPDQTVDSSL--VTEEFGI--AADWS-NDMISLAAAYT-T---DAG-GIVDNDI---AFVGA-AYKF-NDAG  206 (289)
T ss_dssp             EEEEEEEEETTTTSCGGG--SCCEEEE--EEEEE-CSSEEEEEEEE-E---SGG-GCTTCCE---EEEEE-EECC-SSSE
T ss_pred             EEEEEEEEccCCCccccc--ccceEEE--EEEEe-cCCEEEEEEEe-c---cCC-CCCCccE---EEEEE-EEEc-CCCe
Confidence            999998876553221100  0111211  23443 45577777776 1   110 0000000   00000 0000 0000


Q ss_pred             CCCccCCCCccceeecceeEEEEEEeecCCeEEEEEEeEEeccc-eEEEEeEEeecCCCCcccceeecceecC-CCCCcc
Q 014833          298 ASASSLGMNTQEIVSTGSIALKLETELDENAKVGGWFEMQNSNS-NLRWAVTISDIFNEDLEWGVTFSGMHDG-SKGWNQ  375 (417)
Q Consensus       298 ~~~~~~~~~~~~~~s~ns~g~q~~~~i~~~~~lgGW~g~~~~~~-iw~wavtla~~~e~dlG~g~~~gg~~~~-~d~dts  375 (417)
                      .-............. ++|++.+.|.+ ..++|.+|++=..+.. .-.|++...-    |||+|.++-+-+.. .+.+|.
T Consensus       207 ~v~~~Y~d~~d~~~~-~~~gl~~~Y~v-~a~tv~a~y~D~~~~~~~t~yGIg~~Y----DLGgGasl~~gy~~~~~~~~~  280 (289)
T 3prn_A          207 TVGLNWYDNGLSTAG-DQVTLYGNYAF-GATTVRAYVSDIDRAGADTAYGIGADY----QFAEGVKVSGSVQSGFANETV  280 (289)
T ss_dssp             EEEEEEEECTTSTTC-SEEEEEEEEEE-TTEEEEEEEEEECSTTCCCEEEEEEEE----EEETTEEEEEEEEECTTCCEE
T ss_pred             EEEEEEEccccccCC-ceEEEEEEeEe-cCeEEEEEEeccccCCCcceEEEEEEe----cCCCCeEEEEEEEEcCCCceE
Confidence            000000000001123 78999999999 8899999987221112 5679999998    99988888543333 345665


Q ss_pred             eEEEEE
Q 014833          376 YQLESF  381 (417)
Q Consensus       376 ~hiEaf  381 (417)
                      -++=..
T Consensus       281 ad~Gv~  286 (289)
T 3prn_A          281 ADVGVR  286 (289)
T ss_dssp             EEEEEE
T ss_pred             EeeeeE
Confidence            554433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00