Citrus Sinensis ID: 014881


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410------
MGGESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPTYHDYVLYNHNEGDEGTRKYRSRTFVPTGHEMDAVRRNKLDEIQLSSVSSSDASTPKHSSTMPDTAHSDAIKSSLLVDVSNSLSAPYDMALIDIDMSSYPAKVPAAKENETR
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcEEEHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHccccHHHHHHHHccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHEEEEcHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccHHHHHHHHccHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccHHHHHccccccEEEEEEEEcccccccccccccccccHHHccccccEEcccccccccccEEEEEEccccccccccccccccc
MGGESVPFFYIFIAFLCTIGATSLAIFHIYRHLlnyteptyQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLsgrvlkpsvclmtcclppvpldgrfirRCKQGCVQFVILKPILVVATLILFangkykdgnfspdqgyLYITIIYTISYTMALYALVLFYMACRdllhpfnpvpkfiMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHlfafpykeyaganiggsrgltGSLAHALKLndfyhdtvhqfaptyhdyvlynhnegdegtrkyrsrtfvptghemdAVRRnkldeiqlssvsssdastpkhsstmpdtahsdaiKSSLLVDvsnslsapydmalididmssypakvpaakenetr
MGGESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANgkykdgnfspdQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPTYHDYVLYNHnegdegtrkyrsrtfvptghemdavrrNKLDEIQLssvsssdastpkhsstmpdtahSDAIKSSLLVDVSNSLSAPYDMALIDIDmssypakvpaakenetr
MGGESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGylyitiiytisytMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPTYHDYVLYNHNEGDEGTRKYRSRTFVPTGHEMDAVRRNKLDEIQLSSVSSSDASTPKHSSTMPDTAHSDAIKssllvdvsnslsAPYDMALIDIDMSSYPAKVPAAKENETR
*****VPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPTYHDYVLYNHN*************************************************************************APYDMALIDI******************
***ESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPTYHD************************************************************************************MALIDI******************
MGGESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPTYHDYVLYNHNEGDEGTRKYRSRTFVPTGHEMDAVRRNKLDEIQ**********************HSDAIKSSLLVDVSNSLSAPYDMALIDIDMSSYPAK**********
****SVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPTYHDYVLYNH***************************NKLDEIQLSSVSSS**************************D*S*SLSAPYDMALIDIDMSSYPAK**********
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGGESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPTYHDYVLYNHNEGDEGTRKYRSRTFVPTGHEMDAVRRNKLDEIQLSSVSSSDASTPKHSSTMPDTAHSDAIKSSLLVDVSNSLSAPYDMALIDIDMSSYPAKVPAAKENETR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query416 2.2.26 [Sep-21-2011]
Q8BG09407 Transmembrane protein 184 yes no 0.725 0.742 0.411 1e-68
A2VDL9407 Transmembrane protein 184 yes no 0.800 0.818 0.382 1e-67
Q9Y519407 Transmembrane protein 184 yes no 0.800 0.818 0.382 2e-67
Q6ZMB5413 Transmembrane protein 184 no no 0.713 0.719 0.400 3e-64
Q1RMW2414 Transmembrane protein 184 no no 0.694 0.698 0.407 1e-60
Q4QQS1425 Transmembrane protein 184 no no 0.697 0.682 0.388 3e-60
Q3UFJ6425 Transmembrane protein 184 no no 0.697 0.682 0.385 4e-60
Q28CV2443 Transmembrane protein 184 no no 0.629 0.591 0.387 3e-50
Q6GQE1444 Transmembrane protein 184 N/A no 0.629 0.590 0.383 6e-50
Q54WM0351 Transmembrane protein 184 yes no 0.617 0.732 0.397 2e-49
>sp|Q8BG09|T184B_MOUSE Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1 Back     alignment and function desciption
 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 199/328 (60%), Gaps = 26/328 (7%)

Query: 2   GGESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFL 61
             +++  F+++ A L T          IY HL  Y+ P  QR+IVRI+F+VP++A  S+L
Sbjct: 45  AAQAISGFFVWTALLITC-------HQIYMHLRCYSRPNEQRHIVRILFIVPIYAFDSWL 97

Query: 62  SLVF---PERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMT 118
           SL+F    +  +YF ++R+ YEA+VIYNFLSLC  ++GG  A++  + G+ ++ S    T
Sbjct: 98  SLLFFTNDQYYVYFGTVRDCYEAFVIYNFLSLCYEYLGGESAIMSEIRGKAIESSCMYGT 157

Query: 119 CCLPPVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITII 178
           CCL        F+R CKQ  +QF ++KP++ V+T+IL A GKY+DG+F    GYLY+TII
Sbjct: 158 CCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVILQAFGKYRDGDFDVTSGYLYVTII 217

Query: 179 YTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIEN 238
           Y IS ++ALYAL LFY A R+LL P++PV KF M+KSV+FL++WQG+L+ +  K G I  
Sbjct: 218 YNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPK 277

Query: 239 TDE----------AAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGS------RGLT 282
            +           AA +QDFI+C+EM  AA+    AF YK YA   +         + ++
Sbjct: 278 INSARVSVGEGTVAAGYQDFIICVEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSIS 337

Query: 283 GSLAHALKLNDFYHDTVHQFAPTYHDYV 310
            SL   +  +D   D +H F+P Y  Y 
Sbjct: 338 SSLKETMNPHDIVQDAIHNFSPAYQQYT 365




May activate the MAP kinase signaling pathway.
Mus musculus (taxid: 10090)
>sp|A2VDL9|T184B_BOVIN Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1 Back     alignment and function description
>sp|Q9Y519|T184B_HUMAN Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2 Back     alignment and function description
>sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 Back     alignment and function description
>sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1 Back     alignment and function description
>sp|Q4QQS1|T184A_RAT Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1 Back     alignment and function description
>sp|Q3UFJ6|T184A_MOUSE Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1 Back     alignment and function description
>sp|Q28CV2|T184C_XENTR Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2 SV=1 Back     alignment and function description
>sp|Q6GQE1|T184C_XENLA Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1 Back     alignment and function description
>sp|Q54WM0|T1843_DICDI Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum GN=tmem184C PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query416
255543076420 conserved hypothetical protein [Ricinus 0.992 0.983 0.811 0.0
224124260420 predicted protein [Populus trichocarpa] 0.990 0.980 0.806 0.0
449453982420 PREDICTED: transmembrane protein 184B-li 0.992 0.983 0.804 0.0
356505717421 PREDICTED: transmembrane protein 184A-li 0.995 0.983 0.773 0.0
357511647420 Transmembrane protein 184A [Medicago tru 0.992 0.983 0.766 0.0
356572876419 PREDICTED: transmembrane protein 184A-li 0.992 0.985 0.744 0.0
356575269418 PREDICTED: transmembrane protein 184B-li 0.985 0.980 0.758 0.0
356534951418 PREDICTED: transmembrane protein 184B-li 0.968 0.964 0.761 0.0
42563535422 uncharacterized protein [Arabidopsis tha 0.983 0.969 0.737 1e-180
297833326419 hypothetical protein ARALYDRAFT_340770 [ 0.975 0.968 0.737 1e-178
>gi|255543076|ref|XP_002512601.1| conserved hypothetical protein [Ricinus communis] gi|223548562|gb|EEF50053.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  706 bits (1823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/420 (81%), Positives = 375/420 (89%), Gaps = 7/420 (1%)

Query: 3   GESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLS 62
            E VP +Y  IAF+CT GA +LA+FHIYRHLLNYTEPTYQRYIVRIIFMVP++A MSFLS
Sbjct: 2   AEVVPLYYSIIAFICTFGAIALAVFHIYRHLLNYTEPTYQRYIVRIIFMVPVYASMSFLS 61

Query: 63  LVFPERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLP 122
           LV P  AIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGR+LKPS CLMTCCLP
Sbjct: 62  LVLPASAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRILKPSCCLMTCCLP 121

Query: 123 PVPLDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTIS 182
           P+PLDGRFIRRCKQGC+QFVILKPILV  TL+L+A GKYKDGNFSP+Q YLY+TIIYTIS
Sbjct: 122 PIPLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPNQAYLYLTIIYTIS 181

Query: 183 YTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEA 242
           YTMALYAL LFY+ACRDLL PFNPVPKF++IKSVVFLTYWQGVLVFLAAKSG I++ +EA
Sbjct: 182 YTMALYALALFYVACRDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFIKDAEEA 241

Query: 243 AKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQF 302
           A+FQ+FI+C+EMLIAAVGHLFAFPYKEYAGANIGGS GLTGSLAHALKLNDFYHDTVHQF
Sbjct: 242 AQFQNFIICVEMLIAAVGHLFAFPYKEYAGANIGGSYGLTGSLAHALKLNDFYHDTVHQF 301

Query: 303 APTYHDYVLYNHNEGDEGTRKYRSRTFVPTGHEMDAVRR------NKLDEIQLSSVSSSD 356
           APTYHDYVLYNH+EGDEGTRKYRSRTFVPTG EMDA+RR      NKLDEIQLSS SSS 
Sbjct: 302 APTYHDYVLYNHSEGDEGTRKYRSRTFVPTGQEMDAIRRNKHMFGNKLDEIQLSSHSSSG 361

Query: 357 ASTPKHSSTMPDTAHSDAIKSSLLVDVSNSLSAPYDMALIDIDMSSYPAKVPAAKENETR 416
            STPK+  + PD+   D +KSSLLVD SNS + PYDM+LID+D+SSYPA+VPAA E   R
Sbjct: 362 TSTPKNIVSAPDSVQRDTMKSSLLVDASNSFT-PYDMSLIDMDLSSYPAQVPAANETGIR 420




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124260|ref|XP_002329979.1| predicted protein [Populus trichocarpa] gi|224124264|ref|XP_002329980.1| predicted protein [Populus trichocarpa] gi|118487141|gb|ABK95399.1| unknown [Populus trichocarpa] gi|222871404|gb|EEF08535.1| predicted protein [Populus trichocarpa] gi|222871405|gb|EEF08536.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449453982|ref|XP_004144735.1| PREDICTED: transmembrane protein 184B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356505717|ref|XP_003521636.1| PREDICTED: transmembrane protein 184A-like [Glycine max] Back     alignment and taxonomy information
>gi|357511647|ref|XP_003626112.1| Transmembrane protein 184A [Medicago truncatula] gi|87240996|gb|ABD32854.1| Protein of unknown function [Medicago truncatula] gi|355501127|gb|AES82330.1| Transmembrane protein 184A [Medicago truncatula] Back     alignment and taxonomy information
>gi|356572876|ref|XP_003554591.1| PREDICTED: transmembrane protein 184A-like [Glycine max] Back     alignment and taxonomy information
>gi|356575269|ref|XP_003555764.1| PREDICTED: transmembrane protein 184B-like [Glycine max] Back     alignment and taxonomy information
>gi|356534951|ref|XP_003536014.1| PREDICTED: transmembrane protein 184B-like [Glycine max] Back     alignment and taxonomy information
>gi|42563535|ref|NP_187245.2| uncharacterized protein [Arabidopsis thaliana] gi|6671963|gb|AAF23222.1|AC013454_9 unknown protein [Arabidopsis thaliana] gi|51536568|gb|AAU05522.1| At3g05940 [Arabidopsis thaliana] gi|62320520|dbj|BAD95090.1| hypothetical protein [Arabidopsis thaliana] gi|332640800|gb|AEE74321.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297833326|ref|XP_002884545.1| hypothetical protein ARALYDRAFT_340770 [Arabidopsis lyrata subsp. lyrata] gi|297330385|gb|EFH60804.1| hypothetical protein ARALYDRAFT_340770 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query416
TAIR|locus:2146799422 AT5G26740 [Arabidopsis thalian 0.987 0.973 0.705 1.5e-161
TAIR|locus:2074504422 AT3G05940 [Arabidopsis thalian 0.971 0.957 0.694 7.7e-158
UNIPROTKB|Q6ZMB5413 TMEM184A "Transmembrane protei 0.603 0.607 0.422 2e-63
UNIPROTKB|F1P1L2422 TMEM184A "Uncharacterized prot 0.593 0.585 0.427 5.4e-63
UNIPROTKB|E2R3P6424 TMEM184A "Uncharacterized prot 0.603 0.591 0.426 2.3e-62
ZFIN|ZDB-GENE-040426-2925420 tmem184a "transmembrane protei 0.600 0.595 0.424 2.6e-61
MGI|MGI:2445179407 Tmem184b "transmembrane protei 0.810 0.828 0.369 2.5e-58
UNIPROTKB|A2VDL9407 TMEM184B "Transmembrane protei 0.718 0.734 0.384 2.8e-57
UNIPROTKB|Q9Y519407 TMEM184B "Transmembrane protei 0.718 0.734 0.384 3.6e-57
WB|WBGene00009574398 F40E10.6 [Caenorhabditis elega 0.629 0.658 0.444 3.8e-56
TAIR|locus:2146799 AT5G26740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1573 (558.8 bits), Expect = 1.5e-161, P = 1.5e-161
 Identities = 295/418 (70%), Positives = 341/418 (81%)

Query:     6 VPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVF 65
             +PF+   +AFLCT+GA +LAIFHIYRHLLNYTEPTYQRYIVRIIFMVP++A MSFLSLV 
Sbjct:     5 IPFYLNIVAFLCTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFLSLVL 64

Query:    66 PERAIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSVCLMTCCLPPVP 125
             P+ +IYF+SIREVYEAWVIYNFLSLCLAWVGGPG+VVLSLSGR LKPS  LMTCC PP+ 
Sbjct:    65 PKSSIYFDSIREVYEAWVIYNFLSLCLAWVGGPGSVVLSLSGRSLKPSWSLMTCCFPPLT 124

Query:   126 LDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGXXXXXXXXXXXXXM 185
             LDGRFIRRCKQGC+QFVILKPILV  TL+L+A GKYKDGNF+PDQ              +
Sbjct:   125 LDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFNPDQAYLYLTIIYTISYTV 184

Query:   186 ALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDEAAKF 245
             ALYALVLFYMACRDLL PFNPVPKF++IKSVVFLTYWQGVLVFLAAKSG I++ + AA F
Sbjct:   185 ALYALVLFYMACRDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFIKSAEAAAHF 244

Query:   246 QDFILCIEMLIAAVGHLFAFPYKEYAGANIGGSRGLTGSLAHALKLNDFYHDTVHQFAPT 305
             Q+FI+C+EMLIAA  H +AFPYKEYAGAN+GGS   +GSL+HA+KLNDFYHDTVHQFAPT
Sbjct:   245 QNFIICVEMLIAAACHFYAFPYKEYAGANVGGSGSFSGSLSHAVKLNDFYHDTVHQFAPT 304

Query:   306 YHDYVLYNHNEG-DEGTRKYRSRTFVPTGHEMDAVRRNK------LDEIQLSSVSSSDAS 358
             YHDYVLYNH +G DEGT+KYRSRTFVPTG EMDA+R+NK      +D + +SS  SS+AS
Sbjct:   305 YHDYVLYNHQDGGDEGTKKYRSRTFVPTGQEMDAMRKNKPVYANKIDGVSVSSSLSSEAS 364

Query:   359 TPKHSSTMPDTAHSDAIKXXXXXXXXXXXXAPYDMALIDIDMSSYPAKVPAAKENETR 416
             +PK SS   D A SDA+K              YDM+LIDID+SS+P+ VP+A E+  R
Sbjct:   365 SPKSSSVTSDPARSDAVKSSLLVDASDSLETMYDMSLIDIDLSSFPSNVPSASESGPR 422




GO:0005576 "extracellular region" evidence=ISM
TAIR|locus:2074504 AT3G05940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6ZMB5 TMEM184A "Transmembrane protein 184A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P1L2 TMEM184A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2R3P6 TMEM184A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2925 tmem184a "transmembrane protein 184a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2445179 Tmem184b "transmembrane protein 184b" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A2VDL9 TMEM184B "Transmembrane protein 184B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y519 TMEM184B "Transmembrane protein 184B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
WB|WBGene00009574 F40E10.6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A2VDL9T184B_BOVINNo assigned EC number0.38220.80040.8181yesno
Q9Y519T184B_HUMANNo assigned EC number0.38220.80040.8181yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pm.C_1310001
SubName- Full=Putative uncharacterized protein; (420 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query416
pfam03619272 pfam03619, Solute_trans_a, Organic solute transpor 1e-118
>gnl|CDD|217643 pfam03619, Solute_trans_a, Organic solute transporter Ostalpha Back     alignment and domain information
 Score =  344 bits (885), Expect = e-118
 Identities = 129/268 (48%), Positives = 182/268 (67%), Gaps = 8/268 (2%)

Query: 11  IFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAI 70
           I IA L  + A  +++F I +HL NYT+P  QR I+RI+ MVP++AV+SFLSL+FP+ AI
Sbjct: 5   ILIAGLFVLLALLISLFLILQHLTNYTKPEEQRLIIRILLMVPIYAVISFLSLLFPKAAI 64

Query: 71  YFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGR--VLKPSVCLMTCCLPPVPLDG 128
           YF+ IR+ YEA+VIY F SL +A++GG   ++  L G+  +  P   L  C L     D 
Sbjct: 65  YFDLIRDCYEAFVIYTFFSLLIAYLGGERNIIRLLEGKPPIRHPFPLLTKCLLRTDRSDP 124

Query: 129 RFIRRCKQGCVQFVILKPILVVATLILFANGKYKDGNFSPDQGYLYITIIYTISYTMALY 188
            F  RCK+G +Q+V++KP+  +  +IL A G Y +G+FSPD GYLY+TIIY IS ++ALY
Sbjct: 125 TFFLRCKRGVLQYVVVKPLCAILAIILQAFGVYGEGSFSPDSGYLYLTIIYNISVSLALY 184

Query: 189 ALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIENTDE------A 242
            LVLFY A +D L PF P+ KF+ IK ++F ++WQGVL+ +    GLI+ T+       +
Sbjct: 185 CLVLFYKALKDELAPFKPLLKFLCIKLIIFFSFWQGVLISILVSLGLIKPTEAWEEPELS 244

Query: 243 AKFQDFILCIEMLIAAVGHLFAFPYKEY 270
           A  Q+F++CIEM I A+ HL+AFPYK Y
Sbjct: 245 AGIQNFLICIEMFIFAIAHLYAFPYKPY 272


This family is a transmembrane organic solute transport protein. In vertebrates these proteins form a complex with Ostbeta, and function as bile transporters. In plants they may transport brassinosteroid-like compounds and act as regulators of cell death. Length = 272

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 416
KOG2641386 consensus Predicted seven transmembrane receptor - 100.0
PF03619274 Solute_trans_a: Organic solute transporter Ostalph 100.0
>KOG2641 consensus Predicted seven transmembrane receptor - rhodopsin family [Signal transduction mechanisms] Back     alignment and domain information
Probab=100.00  E-value=5.9e-79  Score=615.27  Aligned_cols=310  Identities=43%  Similarity=0.803  Sum_probs=289.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchhhHHhhhhhhhHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014881            6 VPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIY   85 (416)
Q Consensus         6 ~p~~~~~iag~~~~la~~iS~~~I~~Hl~~Yt~P~~Qr~IiRIL~MvPIYAi~S~lsL~~Pra~iy~~~iRd~YEAfvIY   85 (416)
                      ++.+.+.+|+.++++|+.+++++|++||+||++|++||+|+||++|+||||+.||+|++.|+.++|++++||||||||||
T Consensus        32 ~~~~~~~~a~~f~vit~~ls~~~I~~HL~~y~~P~~qr~iv~il~mvPIys~~S~vsl~~p~~~~~~~~vr~~Yeaf~ly  111 (386)
T KOG2641|consen   32 LLTVALAIASFFVVITILLSLFHIYQHLRYYSNPREQRPIVRILFMVPIYSVASFVSLLVPRVAFYLDTVRECYEAFVLY  111 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhchhhhhhhhhHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCChhhHHHHhhCCCcccc-cccccccCCCCC-CChhHHHHhhcceeehhhHHHHHHHHHHHHHHcCcccC
Q 014881           86 NFLSLCLAWVGGPGAVVLSLSGRVLKPS-VCLMTCCLPPVP-LDGRFIRRCKQGCVQFVILKPILVVATLILFANGKYKD  163 (416)
Q Consensus        86 ~Ff~Ll~~ylGG~~~~v~~l~~~~~~~~-~~~~~CClp~~~-~~~~fLr~~K~gVLQyvivKPl~~iv~iIl~~~G~Y~~  163 (416)
                      +|++||++|+|||++++..+++++.+.+ .+|+|||+||+. ++++++|+||+||+||+|+||+++++++++++.|+|++
T Consensus       112 ~F~sLl~~ylGGe~~~v~~l~~~~~~~~~~~P~cc~~~p~~~~~~~~lr~~K~~vlQ~~ivkp~~~lv~lvl~~~g~y~~  191 (386)
T KOG2641|consen  112 VFLSLLFHYLGGEQNIVTELEGRLIRVNHTPPFCCFFPPTVRLTPKFLRRCKQGVLQYPIVKPFLALVTLVLYAFGVYDD  191 (386)
T ss_pred             HHHHHHHHHcCChHHHHHHHhccCCcccCCCCceeccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            9999999999999999999999988844 455566666543 79999999999999999999999999999999999999


Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHcCCCCC-----
Q 014881          164 GNFSPDQGYLYITIIYTISYTMALYALVLFYMACRDLLHPFNPVPKFIMIKSVVFLTYWQGVLVFLAAKSGLIEN-----  238 (416)
Q Consensus       164 g~~s~~~a~lyl~iI~niSv~lALY~L~lFy~~~k~~L~p~~P~~KFl~IKlVVFlsfwQ~~ii~lL~~~G~I~~-----  238 (416)
                      |++++   |+|+++++|+|+++|+|||.+||+++||+|.||||+.||+|+|+|||+++|||+++.++.+.|.++.     
T Consensus       192 g~~~~---~~~~~~i~n~S~~lalY~L~~fy~~~~~~L~py~p~~KF~~vk~ivf~~~wQg~vi~~l~~~g~~~~~~~~~  268 (386)
T KOG2641|consen  192 GDFSV---YLYLTIIYNCSVSLALYSLVLFYTVTKDELSPYQPVVKFLCVKLIVFLSFWQGIVLAILVKLGKIGPSYFDE  268 (386)
T ss_pred             CCccc---eehhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccchh
Confidence            99987   8999999999999999999999999999999999999999999999999999999999999999982     


Q ss_pred             -hhHHHHhhhhHHHHHHHHHHHHhhhcccccccccccCCC-------CcchHHHHHhhcCcchHHHHHHhhcccccccee
Q 014881          239 -TDEAAKFQDFILCIEMLIAAVGHLFAFPYKEYAGANIGG-------SRGLTGSLAHALKLNDFYHDTVHQFAPTYHDYV  310 (416)
Q Consensus       239 -~~~a~~iqn~LiCvEM~ifAilh~~AFp~k~Y~~~~~~~-------~~~~~~sl~~~~~~~D~~~D~~~~f~~~y~~y~  310 (416)
                       ...+.++||+++|+||+++|++|+||||+++|...+...       ..+..+.++|+++++|..+|..|+|+|+|++|.
T Consensus       269 ~~~~~~~iQnfiiciEM~i~ai~~~~af~~~~ya~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~  348 (386)
T KOG2641|consen  269 VGTVAYGIQNFLICIEMLIAAIAHFYAFPAAPYALFDERSCDYRSVDMFSISSSLWDSLMPNDLCSDAIRNFSPTYQDYT  348 (386)
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHHhCCcchhccccccccccccccccccchHHHHhhcccCcccccccCCCccccccc
Confidence             345899999999999999999999999999998776554       445778999999999999999999999999999


Q ss_pred             eeccCCCC
Q 014881          311 LYNHNEGD  318 (416)
Q Consensus       311 ~~~~~~~~  318 (416)
                      .+++.++.
T Consensus       349 ~~~~~~~~  356 (386)
T KOG2641|consen  349 PQSDQDAL  356 (386)
T ss_pred             ccccCccc
Confidence            99865554



>PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00